The following packages define algorithms both in library and executable form:
tracking: generation of spatio-temporal lineages from cell trackings;statistics: global statistics for measurements;derivatives: discrete derivatives for cell trajectories;homogenization: homogenization of measurements on time, space, etc.;triangulations: generation and manipulation of triangulations;trajectories: trajectories, genealogical trajectories and path integrals;clustering: clustering of cell trajectories;deviations: statistics of deviations of neighboring cells;forces: estimation of forces using least-squares methods;