Code for Hippocampal sharp wave sleep: a unifying view of sleep in the hippocampus.
- To reproduce all figures, see
notebooks/figures/. - To reproduce all statistical tables and supplements, see
r/. - To reproduce all reduced parquet dataframes that input to statiscal analysis and plotting, see
notebooks/data_export. - To reproduce analyses from raw data, see
notebooks/pipeline/pipeline.ipynbto get started.
Most recently tested with Python 3.13.2. I suggest installation and environment management using uv.
See also ecephys, the primary dependency, which provides most core functions.
Thank you!