BACANNOT:SUMMARY, KeyError: 'tmRNA' #131

JavariaAshraf · 2025-02-11T06:19:00Z

Hi fmalmeida,
i am experiencing the following error with the new version.
please help me fix the error.
below is the error:

`Command output:
(empty)

Command error:
Traceback (most recent call last):
File "/opt/conda/envs/falmeida-py/bin/falmeida-py", line 33, in
sys.exit(load_entry_point('falmeida-py==1.2.2', 'console_scripts', 'falmeida-py')())
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/conda/envs/falmeida-py/lib/python3.11/site-packages/falmeida_py/main.py", line 212, in main
bacannot2json(args['--input'], args['--output'], args['--print'])
File "/opt/conda/envs/falmeida-py/lib/python3.11/site-packages/falmeida_py/bacannot2json.py", line 102, in bacannot2json
general_stats( bacannot_summary )
File "/opt/conda/envs/falmeida-py/lib/python3.11/site-packages/falmeida_py/general_stats_function.py", line 43, in general_stats
bacannot_summary[sample]['general_annotation']['tmrna'] = general_results['tmRNA']
~~~~~~~~~~~~~~~^^^^^^^^^
KeyError: 'tmRNA'

Work dir:
/home/cdc-bioinfo/work/39/0a451614ccf1dfc0fe33a572b47d4d

Tip: you can replicate the issue by changing to the process work dir and entering the command bash .command.run

help needed.
thank you,
Javaria Ashraf

fmalmeida · 2025-02-11T06:41:29Z

Hi @JavariaAshraf ,
Can you confirm which version of the pipeline you are running?

I see this falmeida-py==1.2.2 and the latest was supposed to be this falmeida-py==1.2.4.

Thus, I want to confirm whether you are running the latest and there was a problem when I pushed the docker image.

JavariaAshraf · 2025-02-11T06:54:22Z

I have tried both 3.2 and 3.3.

JavariaAshraf · 2025-02-11T06:56:50Z

Now I am running with version v3.4.1, and got following
'WARN: The operator first is useless when applied to a value channel which returns a single value by definition '

fmalmeida · 2025-02-11T07:03:37Z

This warning is fine.
Can you let me know what is the outcome with v3.4.1?

JavariaAshraf · 2025-02-11T12:58:58Z

got following error:

Error executing process > 'BACANNOT:SOURMASH_LCA (SH33)'

  # classify
  sourmash \
      lca classify \
      --db bacannot_dbs/sourmash_db/genbank-31.lca.json.gz \
      --query SH33.fna.sig
  
  # summarize
  sourmash \
      lca summarize \
      --db bacannot_dbs/sourmash_db/genbank-31.lca.json.gz \
      --query SH33.fna.sig > SH33.fna_sourmash.summary.txt

Command exit status:
  255

Command output:
  (empty)

Command error:
  
  
  == This is sourmash version 4.8.2. ==
Caused by:
  Process `BACANNOT:SOURMASH_LCA (SH33)` terminated with an error exit status (255)

Command executed:

  # get version file
  sourmash --version > sourmash_version.txt
  
  # sketch input genome
  sourmash \
      sketch dna \
      -p scaled=1000,k=31 \
      --name-from-first \
      SH33.fna
  
  
  == Please cite Brown and Irber (2016), doi:10.21105/joss.00027. ==
  
  
  computing signatures for files: SH33.fna
  
  Computing a total of 1 signature(s) for each input.
  
  ... reading sequences from SH33.fna
  
  ...SH33.fna 800 sequences
  calculated 1 signatures for 801 sequences in SH33.fna
  
  saved 1 signature(s) to 'SH33.fna.sig'. Note: signature license is CC0.
  
  
  == This is sourmash version 4.8.2. ==
  
  == Please cite Brown and Irber (2016), doi:10.21105/joss.00027. ==
  
  
  Error! Could not find the following files. Make sure the file paths are specified correctly.
  bacannot_dbs/sourmash_db/genbank-31.lca.json.gz

Work dir:
  /home/cdc-bioinfo/work/52/94dc78825a7223d7e962705ec6f956

Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh`

fmalmeida · 2025-02-11T13:25:49Z

Hi @JavariaAshraf ,
This is because the database you are using has been created with a pipeline version before v3.4.0. Thus, the expected file was not found.

The options are the following:

you can use the database you currently have but then skip the sourmash modules with --skip_sourmash, as this other user did for another reason here
or update your database, generating another using the current version of the pipeline

The option of skipping sourmash is the quickest one.

Hope that helps.

JavariaAshraf · 2025-02-12T05:52:01Z

I have used the option and got the following error:

'/....rror executing process > BACANNOT:GFF2GBK (SH32)

Caused by:
  Process BACANNOT:GFF2GBK (SH32) terminated with an error exit status (255)

Command executed:

  # Run emboss seqret
  seqret \
    -sequence SH32.fna \
    -feature \
    -fformat gff \
    -fopenfile SH32.gff \
    -osformat genbank \
    -osname_outseq SH32 \
    -ofdirectory_outseq gbk_file \
    -auto

Command exit status:
  255

Command output:
  (empty)

Command error:
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16129505;PHAST:Product=Qin_prophage;_predicted_tail_fibre_assembly_protein'
  Warning: GFF3 tag parsing failed on '_essential_for_genome_maintenance' in
  'ID=ALKKIJME_02014;eC_number=2.3.1.234;Name=tsaD;db_xref=COG:COG0533;gene=tsaD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P05852;locus_tag=ALKKIJME_02014;product=tRNA N6-adenosine threonylcarbamoyltransferase;Additional_database=KEGG;KO=K07406;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16130960;PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance'
  Warning: GFF3 tag parsing failed on '_predicted_prophage_CPS_53_integrase' in
  'ID=ALKKIJME_03671;Name=intS_1;db_xref=COG:COG0582;gene=intS_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P37326;locus_tag=ALKKIJME_03671;product=Prophage integrase IntS;Additional_database=PHAST;PHAST:Target=PHAST_16130281;PHAST:Product=CPS_53_(KpLE1)_prophage;_predicted_prophage_CPS_53_integrase'
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16129505;PHAST:Product=Qin_prophage;_predicted_tail_fibre_assembly_protein'
  Warning: GFF3 tag parsing failed on '_essential_for_genome_maintenance' in
  'ID=ALKKIJME_02014;eC_number=2.3.1.234;Name=tsaD;db_xref=COG:COG0533;gene=tsaD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P05852;locus_tag=ALKKIJME_02014;product=tRNA N6-adenosine threonylcarbamoyltransferase;Additional_database=KEGG;KO=K07406;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16130960;PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance'
  Warning: GFF3 tag parsing failed on '_predicted_prophage_CPS_53_integrase' in
  'ID=ALKKIJME_03671;Name=intS_1;db_xref=COG:COG0582;gene=intS_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P37326;locus_tag=ALKKIJME_03671;product=Prophage integrase IntS;Additional_database=PHAST;PHAST:Target=PHAST_16130281;PHAST:Product=CPS_53_(KpLE1)_prophage;_predicted_prophage_CPS_53_integrase'
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16129505;PHAST:Product=Qin_prophage;_predicted_tail_fibre_assembly_protein'
  Warning: GFF3 tag parsing failed on '_essential_for_genome_maintenance' in
  'ID=ALKKIJME_02014;eC_number=2.3.1.234;Name=tsaD;db_xref=COG:COG0533;gene=tsaD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P05852;locus_tag=ALKKIJME_02014;product=tRNA N6-adenosine threonylcarbamoyltransferase;Additional_database=KEGG;KO=K07406;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16130960;PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance'
  Warning: GFF3 tag parsing failed on '_predicted_prophage_CPS_53_integrase' in
  'ID=ALKKIJME_03671;Name=intS_1;db_xref=COG:COG0582;gene=intS_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P37326;locus_tag=ALKKIJME_03671;product=Prophage integrase IntS;Additional_database=PHAST;PHAST:Target=PHAST_16130281;PHAST:Product=CPS_53_(KpLE1)_prophage;_predicted_prophage_CPS_53_integrase'
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16129505;PHAST:Product=Qin_prophage;_predicted_tail_fibre_assembly_protein'
  Warning: GFF3 tag parsing failed on '_essential_for_genome_maintenance' in
  'ID=ALKKIJME_02014;eC_number=2.3.1.234;Name=tsaD;db_xref=COG:COG0533;gene=tsaD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P05852;locus_tag=ALKKIJME_02014;product=tRNA N6-adenosine threonylcarbamoyltransferase;Additional_database=KEGG;KO=K07406;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16130960;PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance'
  Warning: GFF3 tag parsing failed on '_predicted_prophage_CPS_53_integrase' in
  'ID=ALKKIJME_03671;Name=intS_1;db_xref=COG:COG0582;gene=intS_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P37326;locus_tag=ALKKIJME_03671;product=Prophage integrase IntS;Additional_database=PHAST;PHAST:Target=PHAST_16130281;PHAST:Product=CPS_53_(KpLE1)_prophage;_predicted_prophage_CPS_53_integrase'
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16129505;PHAST:Product=Qin_prophage;_predicted_tail_fibre_assembly_protein'
  Warning: GFF3 tag parsing failed on '_essential_for_genome_maintenance' in
  'ID=ALKKIJME_02014;eC_number=2.3.1.234;Name=tsaD;db_xref=COG:COG0533;gene=tsaD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P05852;locus_tag=ALKKIJME_02014;product=tRNA N6-adenosine threonylcarbamoyltransferase;Additional_database=KEGG;KO=K07406;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16130960;PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance'
  Warning: GFF3 tag parsing failed on '_predicted_prophage_CPS_53_integrase' in
  'ID=ALKKIJME_03671;Name=intS_1;db_xref=COG:COG0582;gene=intS_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P37326;locus_tag=ALKKIJME_03671;product=Prophage integrase IntS;Additional_database=PHAST;PHAST:Target=PHAST_16130281;PHAST:Product=CPS_53_(KpLE1)_prophage;_predicted_prophage_CPS_53_integrase'
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16129505;PHAST:Product=Qin_prophage;_predicted_tail_fibre_assembly_protein'
  Warning: GFF3 tag parsing failed on '_essential_for_genome_maintenance' in
  'ID=ALKKIJME_02014;eC_number=2.3.1.234;Name=tsaD;db_xref=COG:COG0533;gene=tsaD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P05852;locus_tag=ALKKIJME_02014;product=tRNA N6-adenosine threonylcarbamoyltransferase;Additional_database=KEGG;KO=K07406;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16130960;PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance'
  Warning: GFF3 tag parsing failed on '_predicted_prophage_CPS_53_integrase' in
  'ID=ALKKIJME_03671;Name=intS_1;db_xref=COG:COG0582;gene=intS_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P37326;locus_tag=ALKKIJME_03671;product=Prophage integrase IntS;Additional_database=PHAST;PHAST:Target=PHAST_16130281;PHAST:Product=CPS_53_(KpLE1)_prophage;_predicted_prophage_CPS_53_integrase'
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16129505;PHAST:Product=Qin_prophage;_predicted_tail_fibre_assembly_protein'
  Warning: GFF3 tag parsing failed on '_essential_for_genome_maintenance' in
  'ID=ALKKIJME_02014;eC_number=2.3.1.234;Name=tsaD;db_xref=COG:COG0533;gene=tsaD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P05852;locus_tag=ALKKIJME_02014;product=tRNA N6-adenosine threonylcarbamoyltransferase;Additional_database=KEGG;KO=K07406;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16130960;PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance'
  Warning: GFF3 tag parsing failed on '_predicted_prophage_CPS_53_integrase' in
  'ID=ALKKIJME_03671;Name=intS_1;db_xref=COG:COG0582;gene=intS_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P37326;locus_tag=ALKKIJME_03671;product=Prophage integrase IntS;Additional_database=PHAST;PHAST:Target=PHAST_16130281;PHAST:Product=CPS_53_(KpLE1)_prophage;_predicted_prophage_CPS_53_integrase'
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16129505;PHAST:Product=Qin_prophage;_predicted_tail_fibre_assembly_protein'
  Warning: GFF3 tag parsing failed on '_essential_for_genome_maintenance' in
  'ID=ALKKIJME_02014;eC_number=2.3.1.234;Name=tsaD;db_xref=COG:COG0533;gene=tsaD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P05852;locus_tag=ALKKIJME_02014;product=tRNA N6-adenosine threonylcarbamoyltransferase;Additional_database=KEGG;KO=K07406;Method=KOfamscan;Additional_database=PHAST;PHAST:Target=PHAST_16130960;PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance'
  Warning: GFF3 tag parsing failed on '_predicted_prophage_CPS_53_integrase' in
  'ID=ALKKIJME_03671;Name=intS_1;db_xref=COG:COG0582;gene=intS_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P37326;locus_tag=ALKKIJME_03671;product=Prophage integrase IntS;Additional_database=PHAST;PHAST:Target=PHAST_16130281;PHAST:Product=CPS_53_(KpLE1)_prophage;_predicted_prophage_CPS_53_integrase'
  Warning: GFF3 tag parsing failed on '_predicted_tail_fibre_assembly_protein' in
  'ID=ALKKIJME_03776;Name=tfaE;gene=tfaE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P09153;locus_tag=ALKKIJME_03776;product=Prophage tail fiber assembly protein TfaE;Additional_database=KEGG;KO=K09810,K02003;Method=KOfamscan;Additional_da'"

;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;

please have a look.
Thank you.

fmalmeida · 2025-02-12T08:02:03Z

Hi @JavariaAshraf ,

checking the error PHAST:Product=glycation_binding_protein,_predicted_protease/chaperone;_essential_for_genome_maintenance it is clear to me that the problem comes from the PHAST database file which have some entries in their fasta containing the ; character.

We can see here that indeed this seems to be the case:

❯ grep ';' bacannot_dbs_2024_jul_05/phast_db/sequences | head -n 2
>PHAST~~~Qin_prophage;_predicted_tail_fibre_assembly_protein~~~NP_416064.1~~~PHAST_16129505~~~PROPHAGE_Escher_MG1655-gi|16129505|ref|NP_416064.1| Qin prophage; predicted tail fibre assembly protein [Escherichia coli str. K-12 substr. MG1655]
>PHAST~~~Qin_prophage;_predicted_side_tail_fibre_assembly_protein~~~NP_416065.1~~~PHAST_16129506~~~PROPHAGE_Escher_MG1655-gi|16129506|ref|NP_416065.1| Qin prophage; predicted side tail fibre assembly protein [Escherichia coli str. K-12 substr. MG1655]

This is an error that I only saw now because I never executed with this species. Thanks to you to have noticed such scenario.

The proper fix

The correct fix for the pipeline would be the following:

I add a sed operation when downloading and preparing the PHAST database to remove this character and avoid breaking the pipeline
Then I make a pipeline hotfix for you to test before
Once tested, I can release. And then, you would have to update your database directory (downloading again with the latest pipeline version).

This round would take a while and we probably can finish next week.

The quick fix

If you really need to have some results the soonest possible, I would suggest you run the same command line, but add the following parameter --skip_prophage_search, so that these prophage modules are not executed and you can have the other results.

Let me know which one you are more inclined to. Anyways, I will start (in this branch) with the ""the proper fix"" solution and will ping here in this thread once I would have something for you to test.

fmalmeida · 2025-02-12T08:04:51Z

Also, is this a private genome or a public genome? Was just wondering if I could test with the same sequence while implementing.

fmalmeida · 2025-02-12T10:32:12Z

Hi @JavariaAshraf ,
I have some update for the ""the proper fix"" solution. I have something to test in its specific branch (131-bacannotsummary-keyerror-tmrna).

Assuming you have the bacannot database in the following path: /path-to/bacannot_dbs can you test out the following?

Delete the PHAST database in the database
- rm -rf /path-to/bacannot_dbs/phast_db
Download the PHAST database again with the implementation branch
- nextflow run fmalmeida/bacannot -r 131-bacannotsummary-keyerror-tmrna -latest -profile docker --get_dbs --output /path-to/bacannot_dbs/phast_db
- The pipeline should be smart enough to only download the missing databases.
Then run the pipeline again, using the same command line you had but with the implementation branch
- nextflow run fmalmeida/bacannot -r 131-bacannotsummary-keyerror-tmrna -latest -profile docker --bacannot_db --output /path-to/bacannot_dbs -resume <all the other parameters you had>

To assess whether the code added fixes the bug or not.

If it does, then I can go for a release. If it does not, or something else appears, I have to check the code again.

JavariaAshraf · 2025-02-14T06:58:02Z

Hi fmalmeida,
There is another error: Please see below

WARN:Cannot read project manifest -- Cause: Remote resource not found: https://api.github.com/repos/nextflow/bacannot/contents/nextflow.config?ref=131-bacannotsummary-keyerror-tmrna
Remote resource not found: https://api.github.com/repos/nextflow/bacannot/contents/main.nf?ref=131-bacannotsummary-keyerror-tmrna

It occurred while I was following your defined steps in the proper fix.

fmalmeida · 2025-02-14T07:40:42Z

Hi @JavariaAshraf ,

Was just a misspelling in the command line. I did not have the proper name fmalmeida/bacannot in them.

I have just updated the comment with the correct spelling. Can you try again?

JavariaAshraf · 2025-02-14T10:35:55Z

getting the same error still.

fmalmeida · 2025-02-14T10:52:09Z

What command exactly you executed? You mean the last error or the first?

It should be fmalmeida/bacannot and not nextflow/bacannot

fmalmeida linked a pull request Feb 13, 2025 that will close this issue

Fix prohibited characters in database #132

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BACANNOT:SUMMARY, KeyError: 'tmRNA' #131

BACANNOT:SUMMARY, KeyError: 'tmRNA' #131

JavariaAshraf commented Feb 11, 2025 •

edited by fmalmeida

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BACANNOT:SUMMARY, KeyError: 'tmRNA' #131

BACANNOT:SUMMARY, KeyError: 'tmRNA' #131

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