From a45e3eedfd94a72675fd936f224d9318748280f9 Mon Sep 17 00:00:00 2001
From: "fg-labs-bot[bot]" <274602291+fg-labs-bot[bot]@users.noreply.github.com>
Date: Tue, 28 Jul 2026 23:17:33 +0000
Subject: [PATCH] chore: release v0.1.4

---
 CHANGELOG.md |  18 +++
 Cargo.lock   | 446 +++++++++++++++++++++++++++++----------------------
 Cargo.toml   |   2 +-
 3 files changed, 269 insertions(+), 197 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index ed15bca..f1fdb35 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,24 @@
 
 All notable changes to this project will be documented in this file.
 
+## [0.1.4] - 2026-07-28
+
+### Bug Fixes
+
+- Stop suppressing every release entry ([#18](https://github.com/fg-labs/mako/pull/18))
+
+### Documentation
+
+- Add Bioconda badge ([#17](https://github.com/fg-labs/mako/pull/17))
+- Add Zenodo DOI badge ([#19](https://github.com/fg-labs/mako/pull/19))
+
+### Miscellaneous Tasks
+
+- Refine release-plz workflow and enable semver checks ([#14](https://github.com/fg-labs/mako/pull/14))
+- Bump fgumi to 0.5.0 ([#20](https://github.com/fg-labs/mako/pull/20))
+
+
+
 ## [0.1.3] - 2026-06-20
 
 ### Miscellaneous Tasks
diff --git a/Cargo.lock b/Cargo.lock
index 6a78be8..22a5ca5 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -97,9 +97,9 @@ dependencies = [
 
 [[package]]
 name = "anyhow"
-version = "1.0.102"
+version = "1.0.104"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7f202df86484c868dbad7eaa557ef785d5c66295e41b460ef922eca0723b842c"
+checksum = "330a5ed07fa54e4702c9d6c4174f74427fc0ef6e214bbd677ae50a5099946470"
 
 [[package]]
 name = "approx"
@@ -117,7 +117,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "2aa3a22042e45de04255c7bf3626e239f450200fd0493c1e382263544b20aea6"
 dependencies = [
  "anstyle",
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "libc",
  "predicates",
  "predicates-core",
@@ -160,9 +160,15 @@ dependencies = [
 
 [[package]]
 name = "bitflags"
-version = "2.13.0"
+version = "1.3.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b4388bee8683e3d04af747c73422af53102d2bd24d9eadb6cbc100baef4b43f8"
+checksum = "bef38d45163c2f1dde094a7dfd33ccf595c92905c8f8f4fdc18d06fb1037718a"
+
+[[package]]
+name = "bitflags"
+version = "2.13.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "b588b76d00fde79687d7646a9b5bdf3cc0f655e0bbd080335a95d7e96f3587da"
 
 [[package]]
 name = "bstr"
@@ -178,13 +184,13 @@ dependencies = [
 
 [[package]]
 name = "bstr"
-version = "1.12.1"
+version = "1.13.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "63044e1ae8e69f3b5a92c736ca6269b8d12fa7efe39bf34ddb06d102cf0e2cab"
+checksum = "1f7dc094d718f2e1c1559ad110e27eeaae14a5465d3d56dd6dbd793079fbd530"
 dependencies = [
  "memchr",
- "regex-automata 0.4.14",
- "serde",
+ "regex-automata 0.4.16",
+ "serde_core",
 ]
 
 [[package]]
@@ -205,22 +211,22 @@ checksum = "72f5acc6cb2ba439de613abc23857ec3d78374d8ed5ac84e9d11336e87da8649"
 
 [[package]]
 name = "bytemuck"
-version = "1.25.0"
+version = "1.25.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c8efb64bd706a16a1bdde310ae86b351e4d21550d98d056f22f8a7f7a2183fec"
+checksum = "95832e849adfb21180ccb6826a99da14e5d266ae5c2e668e1602cf234f153797"
 dependencies = [
  "bytemuck_derive",
 ]
 
 [[package]]
 name = "bytemuck_derive"
-version = "1.10.2"
+version = "1.11.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f9abbd1bc6865053c427f7198e6af43bfdedc55ab791faed4fbd361d789575ff"
+checksum = "f65693059b6b9c588b9f62fed1cedbf0a8b805631457ea162d68f0de186f3de5"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
@@ -231,21 +237,21 @@ checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b"
 
 [[package]]
 name = "bytes"
-version = "1.12.0"
+version = "1.12.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8ae3f5d315924270530207e2a68396c3cc547f6dca3fbdca317cfb1a51edb593"
+checksum = "fc652a48c352aef3ea3aed32080501cf3ef6ed5da78602a020c991775b0aff04"
 
 [[package]]
 name = "bytesize"
-version = "2.4.0"
+version = "2.4.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "49e78e506b9d7633710dab98996f22f95f3d0f488e8f1aa162830556ed9fc14d"
+checksum = "3d7c8918969267b2932ffd5655509bbbea0833823058c378876953217f5fc50e"
 
 [[package]]
 name = "cargo-lock"
-version = "11.0.1"
+version = "11.1.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "63585cdf8572aa7adf0e30a253f988f2b77233bfac1973d52efb6dd53a75920e"
+checksum = "50524592e6bfbb1bf6f94e8184a786f637faeaf1cf37bbe65502b9a2c5c48939"
 dependencies = [
  "petgraph",
  "semver",
@@ -256,9 +262,9 @@ dependencies = [
 
 [[package]]
 name = "cc"
-version = "1.2.65"
+version = "1.4.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e228eec9be7c17ccb640b59b36a5cd805ea2a564a4c5e162c2f659fea30d3b96"
+checksum = "5add81bb678e6cb321aff7fa0dc7689ad82b112dbc032cea19f91d6b8e3582b9"
 dependencies = [
  "find-msvc-tools",
  "jobserver",
@@ -274,15 +280,15 @@ checksum = "9330f8b2ff13f34540b44e946ef35111825727b38d33286ef986142615121801"
 
 [[package]]
 name = "cfg_aliases"
-version = "0.2.1"
+version = "0.2.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "613afe47fcd5fac7ccf1db93babcb082c5994d996f20b8b159f2ad1658eb5724"
+checksum = "f079e83a288787bcd14a6aea84cee5c87a67c5a3e660c30f557a3d24761b3527"
 
 [[package]]
 name = "chacha20"
-version = "0.10.0"
+version = "0.10.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6f8d983286843e49675a4b7a2d174efe136dc93a18d69130dd18198a6c167601"
+checksum = "d524456ba66e72eb8b115ff89e01e497f8e6d11d78b70b1aa13c0fbd97540a81"
 dependencies = [
  "cfg-if",
  "cpufeatures",
@@ -302,9 +308,9 @@ dependencies = [
 
 [[package]]
 name = "clap"
-version = "4.6.1"
+version = "4.6.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1ddb117e43bbf7dacf0a4190fef4d345b9bad68dfc649cb349e7d17d28428e51"
+checksum = "d91e0c145792ef73a6ad36d27c75ac09f1832222a3c209689d90f534685ee5b7"
 dependencies = [
  "clap_builder",
  "clap_derive",
@@ -312,9 +318,9 @@ dependencies = [
 
 [[package]]
 name = "clap_builder"
-version = "4.6.0"
+version = "4.6.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "714a53001bf66416adb0e2ef5ac857140e7dc3a0c48fb28b2f10762fc4b5069f"
+checksum = "f09628afdcc538b57f3c6341e9c8e9970f18e4a481690a64974d7023bd33548b"
 dependencies = [
  "anstream",
  "anstyle",
@@ -324,14 +330,14 @@ dependencies = [
 
 [[package]]
 name = "clap_derive"
-version = "4.6.1"
+version = "4.6.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f2ce8604710f6733aa641a2b3731eaa1e8b3d9973d5e3565da11800813f997a9"
+checksum = "d012d2b9d65aca7f18f4d9878a045bc17899bba951561ba5ec3c2ba1eed9a061"
 dependencies = [
  "heck 0.5.0",
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 3.0.3",
 ]
 
 [[package]]
@@ -372,18 +378,18 @@ dependencies = [
 
 [[package]]
 name = "crossbeam-channel"
-version = "0.5.15"
+version = "0.5.16"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "82b8f8f868b36967f9606790d1903570de9ceaf870a7bf9fbbd3016d636a2cb2"
+checksum = "d85363c37faeca707aef026efa9f3b34d077bce547e48f770770625c6013679e"
 dependencies = [
  "crossbeam-utils",
 ]
 
 [[package]]
 name = "crossbeam-deque"
-version = "0.8.6"
+version = "0.8.7"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9dd111b7b7f7d55b72c0a6ae361660ee5853c9af73f70c3c2ef6858b950e2e51"
+checksum = "5181e0de7b61eb03a81e347d6dd8797bae9da5146707b51077e2d71a54ec0ceb"
 dependencies = [
  "crossbeam-epoch",
  "crossbeam-utils",
@@ -400,18 +406,18 @@ dependencies = [
 
 [[package]]
 name = "crossbeam-queue"
-version = "0.3.12"
+version = "0.3.13"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0f58bbc28f91df819d0aa2a2c00cd19754769c2fad90579b3592b1c9ba7a3115"
+checksum = "803d13fb3b09d88be9f4dbc29062c66b19bf7170867ceb746d2a8689bf6c7a26"
 dependencies = [
  "crossbeam-utils",
 ]
 
 [[package]]
 name = "crossbeam-utils"
-version = "0.8.21"
+version = "0.8.22"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d0a5c400df2834b80a4c3327b3aad3a4c4cd4de0629063962b03235697506a28"
+checksum = "61803da095bee82a81bb1a452ecc25d3b2f1416d1897eb86430c6159ef717c17"
 
 [[package]]
 name = "csv"
@@ -441,6 +447,37 @@ version = "0.2.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "b365fabc795046672053e29c954733ec3b05e4be654ab130fe8f1f94d7051f35"
 
+[[package]]
+name = "defmt"
+version = "1.1.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "e2953bfe4f93bbd20cc71198842756f77d161884c99ebbabc41d80231ded88d1"
+dependencies = [
+ "bitflags 1.3.2",
+ "defmt-macros",
+]
+
+[[package]]
+name = "defmt-macros"
+version = "1.1.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "bad9c72e7ca2137e0dc3813245a0d282fd6daad32fd800af018306a9169b5fe8"
+dependencies = [
+ "defmt-parser",
+ "proc-macro2",
+ "quote",
+ "syn 2.0.119",
+]
+
+[[package]]
+name = "defmt-parser"
+version = "1.0.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "10d60334b3b2e7c9d91ef8150abfb6fa4c1c39ebbcf4a81c2e346aad939fee3e"
+dependencies = [
+ "thiserror 2.0.19",
+]
+
 [[package]]
 name = "difflib"
 version = "0.4.0"
@@ -449,20 +486,20 @@ checksum = "6184e33543162437515c2e2b48714794e37845ec9851711914eec9d308f6ebe8"
 
 [[package]]
 name = "displaydoc"
-version = "0.2.6"
+version = "0.2.7"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1ac70aa55017e108007fbaf5aa0f54b021c98f92ff8af59d42eda9da96e3dd4f"
+checksum = "c6232dd377dcc64799954cbd3a9bb882e9cdc1308ccd87b1c098f1fb2eaf82a8"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 3.0.3",
 ]
 
 [[package]]
 name = "either"
-version = "1.16.0"
+version = "1.17.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "91622ff5e7162018101f2fea40d6ebf4a78bbe5a49736a2020649edf9693679e"
+checksum = "9e5e8f6c15a24b9a3ee5efec809ccd006d3b30e8b3bb63c39af737c7f87daa1d"
 
 [[package]]
 name = "enum_dispatch"
@@ -473,14 +510,14 @@ dependencies = [
  "once_cell",
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
 name = "env_filter"
-version = "1.0.1"
+version = "2.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "32e90c2accc4b07a8456ea0debdc2e7587bdd890680d71173a15d4ae604f6eef"
+checksum = "900d271a03799a1ee8d1ca9b19893b48ca674a9284fefcfb85f05e74ed314217"
 dependencies = [
  "log",
  "regex",
@@ -488,9 +525,9 @@ dependencies = [
 
 [[package]]
 name = "env_logger"
-version = "0.11.10"
+version = "0.11.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0621c04f2196ac3f488dd583365b9c09be011a4ab8b9f37248ffcc8f6198b56a"
+checksum = "de671bd27a75a797dc9ae289ba1e77276e75e2026408aab65185384e2d5cd3f6"
 dependencies = [
  "anstream",
  "anstyle",
@@ -517,13 +554,13 @@ dependencies = [
 
 [[package]]
 name = "fastrand"
-version = "2.4.1"
+version = "2.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9f1f227452a390804cdb637b74a86990f2a7d7ba4b7d5693aac9b4dd6defd8d6"
+checksum = "da7c62ceae207dd37ea5b845da6a0696c799f85e97da1ab5b7910be3c1c80223"
 
 [[package]]
 name = "fg-mako"
-version = "0.1.3"
+version = "0.1.4"
 dependencies = [
  "anyhow",
  "assert_cmd",
@@ -560,7 +597,7 @@ dependencies = [
  "ahash",
  "anyhow",
  "approx",
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "built",
  "bytemuck",
  "bytes",
@@ -600,7 +637,7 @@ dependencies = [
  "noodles-bgzf 0.47.0",
  "num_cpus",
  "parking_lot",
- "rand 0.10.1",
+ "rand 0.10.2",
  "rand_distr 0.6.0",
  "rayon",
  "read-structure",
@@ -608,7 +645,7 @@ dependencies = [
  "statrs",
  "sysinfo",
  "tempfile",
- "thiserror 2.0.18",
+ "thiserror 2.0.19",
 ]
 
 [[package]]
@@ -619,7 +656,7 @@ checksum = "559f2e5c372a98f88a7dc304f81c514b926f04029495d41ab83e0b4939510eea"
 dependencies = [
  "anyhow",
  "bgzf",
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "bytes",
  "crossbeam-channel",
  "fgumi-bgzf",
@@ -652,15 +689,15 @@ dependencies = [
  "ahash",
  "anyhow",
  "approx",
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "fgumi-dna",
  "fgumi-metrics",
  "fgumi-raw-bam",
  "fgumi-sam",
  "log",
  "noodles 0.111.0",
- "rand 0.10.1",
- "thiserror 2.0.18",
+ "rand 0.10.2",
+ "thiserror 2.0.19",
  "wide 1.5.0",
 ]
 
@@ -705,7 +742,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "eac5e9ed460bab38e69e3cdee80506a46fb8fda5375d8782ca7626bf28af631a"
 dependencies = [
  "anyhow",
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "clap",
  "fgumi-dna",
  "fgumi-raw-bam",
@@ -729,7 +766,7 @@ checksum = "d67f44fc0ea3e5a81880aa08e2d5a12d241615564878ad654651a80bc129205a"
 dependencies = [
  "ahash",
  "anyhow",
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "bytemuck",
  "bytes",
  "bytesize",
@@ -842,21 +879,21 @@ dependencies = [
 
 [[package]]
 name = "futures-core"
-version = "0.3.32"
+version = "0.3.33"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7e3450815272ef58cec6d564423f6e755e25379b217b0bc688e295ba24df6b1d"
+checksum = "2cd50c473c80f6d7c3670a752354b8e569b1a7cbfdc0419ec88e5edad85e0dc7"
 
 [[package]]
 name = "futures-task"
-version = "0.3.32"
+version = "0.3.33"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "037711b3d59c33004d3856fbdc83b99d4ff37a24768fa1be9ce3538a1cde4393"
+checksum = "b231ed28831efb4a61a08580c4bc233ec56bc009f4cd8f52da2c3cb97df0c109"
 
 [[package]]
 name = "futures-util"
-version = "0.3.32"
+version = "0.3.33"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "389ca41296e6190b48053de0321d02a77f32f8a5d2461dd38762c0593805c6d6"
+checksum = "a77a90a256fce34da66415271e30f94ee91c57b04b8a2c042d9cf3220179deaa"
 dependencies = [
  "futures-core",
  "futures-task",
@@ -905,7 +942,7 @@ version = "0.21.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "ddddbf932745a6be37109b6112d3ee09696106f848449069d3a57bba937ab82e"
 dependencies = [
- "bitflags",
+ "bitflags 2.13.1",
  "libc",
  "libgit2-sys",
  "log",
@@ -1115,10 +1152,12 @@ checksum = "8f42a60cbdf9a97f5d2305f08a87dc4e09308d1276d28c869c684d7777685682"
 
 [[package]]
 name = "jiff"
-version = "0.2.28"
+version = "0.2.35"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4603d3033e49e2b0e31229fcab20a5d40089c607d975cd9c80551dc69eed9102"
+checksum = "668b7183bd07af9a4885f5c35b0cc5c83c4607a913c16b7e17291832910d2dcc"
 dependencies = [
+ "defmt",
+ "jiff-core",
  "jiff-static",
  "log",
  "portable-atomic",
@@ -1126,32 +1165,42 @@ dependencies = [
  "serde_core",
 ]
 
+[[package]]
+name = "jiff-core"
+version = "0.1.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "7feca88439efe53da3754500c1851dedf3cb36c524dd5cf8225cc0794de95d09"
+dependencies = [
+ "defmt",
+]
+
 [[package]]
 name = "jiff-static"
-version = "0.2.28"
+version = "0.2.35"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "782d32378dddf207193ac91cefb848ad41abb58195c95168e1291227a0832b47"
+checksum = "3a69dcb3a21cfb32ce1cd056169337ca284af0766dd766e7878819b251a49204"
 dependencies = [
+ "jiff-core",
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
 name = "jobserver"
-version = "0.1.34"
+version = "0.1.35"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9afb3de4395d6b3e67a780b6de64b51c978ecf11cb9a462c66be7d4ca9039d33"
+checksum = "1c00acbd29eabad4a2392fa0e921c874934dbbf4194312ad20f04a0ed67a3cb3"
 dependencies = [
- "getrandom 0.3.4",
+ "getrandom 0.4.3",
  "libc",
 ]
 
 [[package]]
 name = "js-sys"
-version = "0.3.102"
+version = "0.3.103"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "03d04c30968dffe80775bd4d7fb676131cd04a1fb46d2686dbffbaec2d9dfd31"
+checksum = "53b44bfcdb3f8d5837a46dae1ca9660a837176eee74a28b229bc626816589102"
 dependencies = [
  "cfg-if",
  "futures-util",
@@ -1223,9 +1272,9 @@ dependencies = [
 
 [[package]]
 name = "libc"
-version = "0.2.186"
+version = "0.2.189"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "68ab91017fe16c622486840e4c83c9a37afeff978bd239b5293d61ece587de66"
+checksum = "3eaf3ede3fee6db1a4c2ee091bf8a8b4dccdc6d17f656fb07896ee72867612f2"
 
 [[package]]
 name = "libdeflate-sys"
@@ -1247,9 +1296,9 @@ dependencies = [
 
 [[package]]
 name = "libgit2-sys"
-version = "0.18.5+1.9.4"
+version = "0.18.7+1.9.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "005d6ae6eac1912906073e069f7db60b1fa98e052a68227824afe3e3a1c59ca2"
+checksum = "23c7391e4b9f4ffab1a624223cc1d7385ff9a678f490768add717de7ea2f4d89"
 dependencies = [
  "cc",
  "libc",
@@ -1308,15 +1357,15 @@ dependencies = [
 
 [[package]]
 name = "log"
-version = "0.4.32"
+version = "0.4.33"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "953f07c43838f8e6f9758cab68bf5bed85465e7587ebe0b823f1bcd81978ad3a"
+checksum = "0ceec5bc11778974d1bcb055b18002eba7f4b3518b6a0081b3af5f21666da9ad"
 
 [[package]]
 name = "lru"
-version = "0.18.0"
+version = "0.18.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8a860605968fce16869fd239cf4237a82f3ac470723415db603b0e8b6c8d4fb9"
+checksum = "0b6180140927ee907000b0aa540091f6ea512ead4447c92b8fc35bc72788a5a6"
 dependencies = [
  "hashbrown 0.17.1",
 ]
@@ -1329,9 +1378,9 @@ checksum = "dae608c151f68243f2b000364e1f7b186d9c29845f7d2d85bd31b9ad77ad552b"
 
 [[package]]
 name = "matrixmultiply"
-version = "0.3.10"
+version = "0.3.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a06de3016e9fae57a36fd14dba131fccf49f74b40b7fbdb472f96e361ec71a08"
+checksum = "3f607c237553f086e7043417a51df26b2eb899d3caff94e6a67592ff992fedc7"
 dependencies = [
  "autocfg",
  "rawpointer",
@@ -1339,9 +1388,9 @@ dependencies = [
 
 [[package]]
 name = "memchr"
-version = "2.8.2"
+version = "2.8.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "88904434abc2901f197fe8cc55f0445e7ded921dba5911dad2e2b39b48e663c4"
+checksum = "cf8baf1c55e62ffcace7a9f06f4bd9cd3f0c4beb022d3b367256b91b87513d98"
 
 [[package]]
 name = "mimalloc"
@@ -1373,7 +1422,7 @@ dependencies = [
  "num-complex",
  "num-rational",
  "num-traits",
- "rand 0.8.6",
+ "rand 0.8.7",
  "rand_distr 0.4.3",
  "simba",
  "typenum",
@@ -1385,7 +1434,7 @@ version = "0.31.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "cf20d2fde8ff38632c426f1165ed7436270b44f199fc55284c38276f9db47c3d"
 dependencies = [
- "bitflags",
+ "bitflags 2.13.1",
  "cfg-if",
  "cfg_aliases",
  "libc",
@@ -1423,7 +1472,7 @@ version = "0.86.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "f9414f553acb9c4285ecc31b83f52ee55ac5b806e432303af74dbcde38bd2094"
 dependencies = [
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "indexmap",
  "memchr",
  "noodles-bgzf 0.46.0",
@@ -1438,7 +1487,7 @@ version = "0.90.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "4d319ea3e4414172455eec82f0283ae3fc6a5a8e9b23bdc16ee426986a615094"
 dependencies = [
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "indexmap",
  "memchr",
  "noodles-bgzf 0.47.0",
@@ -1476,7 +1525,7 @@ version = "0.19.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "53e1e8a419dbba0e4000b0e60830b124138c7f2277ad556463506f1a81d32d17"
 dependencies = [
- "bstr 1.12.1",
+ "bstr 1.13.0",
 ]
 
 [[package]]
@@ -1485,7 +1534,7 @@ version = "0.20.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "c8dbac7c5f9a7de9fe45590f198a09697df631cd13d2060b4742cc48144555b0"
 dependencies = [
- "bstr 1.12.1",
+ "bstr 1.13.0",
 ]
 
 [[package]]
@@ -1495,7 +1544,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "348b39ee45de200280706b1152a082f847cd258eed13105441c80b8f6097b489"
 dependencies = [
  "bit-vec 0.8.0",
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "indexmap",
  "noodles-bgzf 0.46.0",
  "noodles-core 0.19.0",
@@ -1508,7 +1557,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "6832254d731cb022d46927ce64403221b280b17140516cafa21e43ee4140d633"
 dependencies = [
  "bit-vec 0.9.1",
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "indexmap",
  "noodles-bgzf 0.47.0",
  "noodles-core 0.20.0",
@@ -1520,7 +1569,7 @@ version = "0.62.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "c36aecf3899ba8ca698bddee3c7264d6e70afca6620524ece230d2c34b93021b"
 dependencies = [
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "memchr",
  "noodles-bgzf 0.47.0",
  "noodles-core 0.20.0",
@@ -1532,8 +1581,8 @@ version = "0.82.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "45df1c1b8939d136a9612f3b3721cafdf4627f2daf2754bb8e9cf5aca70a4c34"
 dependencies = [
- "bitflags",
- "bstr 1.12.1",
+ "bitflags 2.13.1",
+ "bstr 1.13.0",
  "indexmap",
  "lexical-core",
  "memchr",
@@ -1548,8 +1597,8 @@ version = "0.85.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "fbaf538bea4f886de8b3fb611784a13f82c9f8e08e942849e88ec44234674512"
 dependencies = [
- "bitflags",
- "bstr 1.12.1",
+ "bitflags 2.13.1",
+ "bstr 1.13.0",
  "indexmap",
  "lexical-core",
  "memchr",
@@ -1564,7 +1613,7 @@ version = "0.62.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "f5dceef2f7228d2977133f7b1a707c00ce0fdcf7c171e60b1e0286df0d8886fe"
 dependencies = [
- "bstr 1.12.1",
+ "bstr 1.13.0",
  "indexmap",
  "noodles-bgzf 0.47.0",
  "noodles-core 0.20.0",
@@ -1603,9 +1652,9 @@ dependencies = [
 
 [[package]]
 name = "num-bigint"
-version = "0.4.6"
+version = "0.4.8"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a5e44f723f1133c9deac646763579fdb3ac745e418f2a7af9cd0c431da1f20b9"
+checksum = "c89e69e7e0f03bea5ef08013795c25018e101932225a656383bd384495ecc367"
 dependencies = [
  "num-integer",
  "num-traits",
@@ -1666,7 +1715,7 @@ version = "0.3.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "2a180dd8642fa45cdb7dd721cd4c11b1cadd4929ce112ebd8b9f5803cc79d536"
 dependencies = [
- "bitflags",
+ "bitflags 2.13.1",
 ]
 
 [[package]]
@@ -1761,9 +1810,9 @@ checksum = "19f132c84eca552bf34cab8ec81f1c1dcc229b811638f9d283dceabe58c5569e"
 
 [[package]]
 name = "portable-atomic"
-version = "1.13.1"
+version = "1.14.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c33a9471896f1c69cecef8d20cbe2f7accd12527ce60845ff44c153bb2a21b49"
+checksum = "3d20d5497ef88037a52ff98267d066e7f11fcc5e99bbfbd58a42336193aacec3"
 
 [[package]]
 name = "portable-atomic-util"
@@ -1824,18 +1873,18 @@ dependencies = [
 
 [[package]]
 name = "proc-macro2"
-version = "1.0.106"
+version = "1.0.107"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8fd00f0bb2e90d81d1044c2b32617f68fcb9fa3bb7640c23e9c748e53fb30934"
+checksum = "985e7ec9bb745e6ce6535b544d84d6cd6f7ad8bd711c398938ae983b91a766d9"
 dependencies = [
  "unicode-ident",
 ]
 
 [[package]]
 name = "quote"
-version = "1.0.45"
+version = "1.0.47"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "41f2619966050689382d2b44f664f4bc593e129785a36d6ee376ddf37259b924"
+checksum = "1fbf4db142a473a8d80c26bbf18454ed458bf8d26c8219c331daecfdbd079001"
 dependencies = [
  "proc-macro2",
 ]
@@ -1854,9 +1903,9 @@ checksum = "f8dcc9c7d52a811697d2151c701e0d08956f92b0e24136cf4cf27b57a6a0d9bf"
 
 [[package]]
 name = "rand"
-version = "0.8.6"
+version = "0.8.7"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5ca0ecfa931c29007047d1bc58e623ab12e5590e8c7cc53200d5202b69266d8a"
+checksum = "22f6172bdec972074665ed81ed53b71da00bfc44b65a753cfde883ec4c702a1a"
 dependencies = [
  "libc",
  "rand_chacha",
@@ -1865,9 +1914,9 @@ dependencies = [
 
 [[package]]
 name = "rand"
-version = "0.10.1"
+version = "0.10.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d2e8e8bcc7961af1fdac401278c6a831614941f6164ee3bf4ce61b7edb162207"
+checksum = "c7f5fa3a058cd35567ef9bfa5e75732bee0f9e4c55fa90477bef2dfcdbc4be80"
 dependencies = [
  "chacha20",
  "getrandom 0.4.3",
@@ -1906,7 +1955,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "32cb0b9bc82b0a0876c2dd994a7e7a2683d3e7390ca40e6886785ef0c7e3ee31"
 dependencies = [
  "num-traits",
- "rand 0.8.6",
+ "rand 0.8.7",
 ]
 
 [[package]]
@@ -1916,7 +1965,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "4d431c2703ccf129de4d45253c03f49ebb22b97d6ad79ee3ecfc7e3f4862c1d8"
 dependencies = [
  "num-traits",
- "rand 0.10.1",
+ "rand 0.10.2",
 ]
 
 [[package]]
@@ -1963,18 +2012,18 @@ version = "0.5.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "ed2bf2547551a7053d6fdfafda3f938979645c44812fbfcda098faae3f1a362d"
 dependencies = [
- "bitflags",
+ "bitflags 2.13.1",
 ]
 
 [[package]]
 name = "regex"
-version = "1.12.4"
+version = "1.13.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f1292b7759ae1cb9ec195452d1390a074f0cd8541ab7a5a8c31cd6db45d4a6ba"
+checksum = "f020237b6c8eed93db2e2cb53c00c60a8e1bc73da7d073199a1180401450218d"
 dependencies = [
  "aho-corasick",
  "memchr",
- "regex-automata 0.4.14",
+ "regex-automata 0.4.16",
  "regex-syntax",
 ]
 
@@ -1986,9 +2035,9 @@ checksum = "6c230d73fb8d8c1b9c0b3135c5142a8acee3a0558fb8db5cf1cb65f8d7862132"
 
 [[package]]
 name = "regex-automata"
-version = "0.4.14"
+version = "0.4.16"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6e1dd4122fc1595e8162618945476892eefca7b88c52820e74af6262213cae8f"
+checksum = "8fcfdb36bda0c880c5931cdc7a2bcdc8ba4556847b9d912bca70bc94708711ad"
 dependencies = [
  "aho-corasick",
  "memchr",
@@ -2007,7 +2056,7 @@ version = "1.1.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "b6fe4565b9518b83ef4f91bb47ce29620ca828bd32cb7e408f0062e9930ba190"
 dependencies = [
- "bitflags",
+ "bitflags 2.13.1",
  "errno",
  "libc",
  "linux-raw-sys",
@@ -2016,9 +2065,9 @@ dependencies = [
 
 [[package]]
 name = "rustversion"
-version = "1.0.22"
+version = "1.0.23"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b39cdef0fa800fc44525c84ccb54a029961a8215f9619753635a9c0d2538d46d"
+checksum = "cf54715a573b99ac80df0bc206da022bcd442c974952c7b9720069370852e21f"
 
 [[package]]
 name = "ryu"
@@ -2037,9 +2086,9 @@ dependencies = [
 
 [[package]]
 name = "safe_arch"
-version = "1.0.0"
+version = "1.1.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1f7caad094bd561859bcd467734a720c3c1f5d1f338995351fefe2190c45efed"
+checksum = "3a52ec151f024d703f9fd65abb7cbe81e7cdb39f18917a3a37e3014470dc7c59"
 dependencies = [
  "bytemuck",
 ]
@@ -2062,9 +2111,9 @@ dependencies = [
 
 [[package]]
 name = "serde"
-version = "1.0.228"
+version = "1.0.229"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9a8e94ea7f378bd32cbbd37198a4a91436180c5bb472411e48b5ec2e2124ae9e"
+checksum = "4148590afebada386688f18773da617792bf2ef03ffc1e4cbd2b1d45b023e0ba"
 dependencies = [
  "serde_core",
  "serde_derive",
@@ -2094,29 +2143,29 @@ dependencies = [
 
 [[package]]
 name = "serde_core"
-version = "1.0.228"
+version = "1.0.229"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "41d385c7d4ca58e59fc732af25c3983b67ac852c1a25000afe1175de458b67ad"
+checksum = "67dca2c9c51e58a4791a4b1ed58308b39c64224d349a935ab5039aa360942a48"
 dependencies = [
  "serde_derive",
 ]
 
 [[package]]
 name = "serde_derive"
-version = "1.0.228"
+version = "1.0.229"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d540f220d3187173da220f885ab66608367b6574e925011a9353e4badda91d79"
+checksum = "e7a5d71263a5a7d47b41f6b3f06ba276f10cc18b0931f1799f710578e2309348"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 3.0.3",
 ]
 
 [[package]]
 name = "serde_json"
-version = "1.0.150"
+version = "1.0.151"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e8014e44b4736ed0538adeecded0fce2a272f22dc9578a7eb6b2d9993c74cfb9"
+checksum = "c841b55ecdae098c80dcae9cf767f6f8a0c2cdb3416bbef72181df4d0fe73f14"
 dependencies = [
  "itoa 1.0.18",
  "memchr",
@@ -2155,9 +2204,9 @@ dependencies = [
 
 [[package]]
 name = "simd-adler32"
-version = "0.3.9"
+version = "0.3.10"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "703d5c7ef118737c72f1af64ad2f6f8c5e1921f818cdcb97b8fe6fc69bf66214"
+checksum = "3a219298ac11a56ea9a6d2120044824d6f01aeb034955e7af7bc16858527deea"
 
 [[package]]
 name = "slab"
@@ -2186,7 +2235,7 @@ dependencies = [
  "approx",
  "nalgebra",
  "num-traits",
- "rand 0.8.6",
+ "rand 0.8.7",
 ]
 
 [[package]]
@@ -2227,9 +2276,20 @@ dependencies = [
 
 [[package]]
 name = "syn"
-version = "2.0.118"
+version = "2.0.119"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1b9ae57f904213ebb649ce6895b8a66c66f0203b9319718f69a5612a065b1422"
+checksum = "872831b642d1a07999a962a351ed35b955ea2cfc8f3862091e2a240a84f17297"
+dependencies = [
+ "proc-macro2",
+ "quote",
+ "unicode-ident",
+]
+
+[[package]]
+name = "syn"
+version = "3.0.3"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "53e9bae58849f64dfa4f5d5ae372c8341f7305f82a3868709269343628b659a3"
 dependencies = [
  "proc-macro2",
  "quote",
@@ -2244,7 +2304,7 @@ checksum = "728a70f3dbaf5bab7f0c4b1ac8d7ae5ea60a4b5549c8a5914361c99147a709d2"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
@@ -2291,11 +2351,11 @@ dependencies = [
 
 [[package]]
 name = "thiserror"
-version = "2.0.18"
+version = "2.0.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4288b5bcbc7920c07a1149a35cf9590a2aa808e0bc1eafaade0b80947865fbc4"
+checksum = "09a43598840e33d5b0331f38c5e30d13bb11c11210a4b58f0d9b18a5a5eefcd9"
 dependencies = [
- "thiserror-impl 2.0.18",
+ "thiserror-impl 2.0.19",
 ]
 
 [[package]]
@@ -2306,18 +2366,18 @@ checksum = "4fee6c4efc90059e10f81e6d42c60a18f76588c3d74cb83a0b242a2b6c7504c1"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
 name = "thiserror-impl"
-version = "2.0.18"
+version = "2.0.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ebc4ee7f67670e9b64d05fa4253e753e016c6c95ff35b89b7941d6b856dec1d5"
+checksum = "43cbfe0cf76104d42a574802844187e84a305e531ed54455f11fbde0f10541cd"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 3.0.3",
 ]
 
 [[package]]
@@ -2332,9 +2392,9 @@ dependencies = [
 
 [[package]]
 name = "toml"
-version = "0.9.12+spec-1.1.0"
+version = "1.1.4+spec-1.1.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cf92845e79fc2e2def6a5d828f0801e29a2f8acc037becc5ab08595c7d5e9863"
+checksum = "3aace63f4bbcdfc2c965b059de67119c89c4017a70d633be6c104910f67056f5"
 dependencies = [
  "indexmap",
  "serde_core",
@@ -2342,32 +2402,32 @@ dependencies = [
  "toml_datetime",
  "toml_parser",
  "toml_writer",
- "winnow 0.7.15",
+ "winnow",
 ]
 
 [[package]]
 name = "toml_datetime"
-version = "0.7.5+spec-1.1.0"
+version = "1.1.1+spec-1.1.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "92e1cfed4a3038bc5a127e35a2d360f145e1f4b971b551a2ba5fd7aedf7e1347"
+checksum = "3165f65f62e28e0115a00b2ebdd37eb6f3b641855f9d636d3cd4103767159ad7"
 dependencies = [
  "serde_core",
 ]
 
 [[package]]
 name = "toml_parser"
-version = "1.1.2+spec-1.1.0"
+version = "1.1.3+spec-1.1.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a2abe9b86193656635d2411dc43050282ca48aa31c2451210f4202550afb7526"
+checksum = "1d38ac1cf9b95face32296c0a3ede1fdc270627c9d9c02a7274dd6d960dc4d56"
 dependencies = [
- "winnow 1.0.3",
+ "winnow",
 ]
 
 [[package]]
 name = "toml_writer"
-version = "1.1.1+spec-1.1.0"
+version = "1.1.2+spec-1.1.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "756daf9b1013ebe47a8776667b466417e2d4c5679d441c26230efd9ef78692db"
+checksum = "7d56353a2a665ad0f41a421187180aab746c8c325620617ad883a99a1cbe66d2"
 
 [[package]]
 name = "typenum"
@@ -2443,9 +2503,9 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen"
-version = "0.2.125"
+version = "0.2.126"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8ddb3f79143bced6de84270411622a2699cee572fc0875aeaf1e7867cf9fca1a"
+checksum = "4b067c0c11094aef6b7a801c1e34a26affafdf3d051dba08456b868789aaf9a4"
 dependencies = [
  "cfg-if",
  "once_cell",
@@ -2456,9 +2516,9 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-macro"
-version = "0.2.125"
+version = "0.2.126"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4e21a184b13fb19e157296e2c46056aec9092264fab83e4ba59e68c61b323c3d"
+checksum = "167ce5e579f6bcf889c4f7175a8a5a585de84e8ff93976ce393efa5f2837aab1"
 dependencies = [
  "quote",
  "wasm-bindgen-macro-support",
@@ -2466,22 +2526,22 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-macro-support"
-version = "0.2.125"
+version = "0.2.126"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "fecefd9c35bd935a20fc3fc344b5f29138961e4f47fb03297d88f2587afb5ebd"
+checksum = "f3997c7839262f4ef12cf90b818d6340c18e80f263f1a94bf157d0ec4420380e"
 dependencies = [
  "bumpalo",
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
  "wasm-bindgen-shared",
 ]
 
 [[package]]
 name = "wasm-bindgen-shared"
-version = "0.2.125"
+version = "0.2.126"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "23939e44bb9a5d7576fa2b563dc2e136628f1224e88a8deed09e04858b77871f"
+checksum = "dc1b4cb0cc549fcf58d7dfc081778139b3d283a081644e833e84682ad71cea24"
 dependencies = [
  "unicode-ident",
 ]
@@ -2503,7 +2563,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "dfdfe6a32973f2d1b268b8895845a8a96cac2f0191e72c27cc929036060dbf89"
 dependencies = [
  "bytemuck",
- "safe_arch 1.0.0",
+ "safe_arch 1.1.0",
 ]
 
 [[package]]
@@ -2581,7 +2641,7 @@ checksum = "053e2e040ab57b9dc951b72c264860db7eb3b0200ba345b4e4c3b14f67855ddf"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
@@ -2592,7 +2652,7 @@ checksum = "3f316c4a2570ba26bbec722032c4099d8c8bc095efccdc15688708623367e358"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
@@ -2649,15 +2709,9 @@ dependencies = [
 
 [[package]]
 name = "winnow"
-version = "0.7.15"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "df79d97927682d2fd8adb29682d1140b343be4ac0f08fd68b7765d9c059d3945"
-
-[[package]]
-name = "winnow"
-version = "1.0.3"
+version = "1.0.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0592e1c9d151f854e6fd382574c3a0855250e1d9b2f99d9281c6e6391af352f1"
+checksum = "23b97319f7b8343df12cc98938e5c3eb436064524c8d2b4e30a1d3a36eecdf81"
 
 [[package]]
 name = "wit-bindgen"
@@ -2690,28 +2744,28 @@ checksum = "de844c262c8848816172cef550288e7dc6c7b7814b4ee56b3e1553f275f1858e"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
  "synstructure",
 ]
 
 [[package]]
 name = "zerocopy"
-version = "0.8.52"
+version = "0.8.55"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ce1022995ff5ff5d841ad7d994facc23098cd40152f2c1d11cd607c6f530653f"
+checksum = "b5a105cd7b140f6eeec8acff2ea38135d3cab283ada58540f629fe51e46696eb"
 dependencies = [
  "zerocopy-derive",
 ]
 
 [[package]]
 name = "zerocopy-derive"
-version = "0.8.52"
+version = "0.8.55"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1ae7f38b72ec2a254e2b87ef277cf2cd4fb97cbebf944faa6f33354da0867930"
+checksum = "0fe976fb70c78cd64cccfe3a6fc142244e8a77b70959b30faf9d0ac37ee228eb"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
@@ -2731,7 +2785,7 @@ checksum = "11532158c46691caf0f2593ea8358fed6bbf68a0315e80aae9bd41fbade684a1"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
  "synstructure",
 ]
 
@@ -2765,20 +2819,20 @@ checksum = "625dc425cab0dca6dc3c3319506e6593dcb08a9f387ea3b284dbd52a92c40555"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.118",
+ "syn 2.0.119",
 ]
 
 [[package]]
 name = "zlib-rs"
-version = "0.6.3"
+version = "0.6.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3be3d40e40a133f9c916ee3f9f4fa2d9d63435b5fbe1bfc6d9dae0aa0ada1513"
+checksum = "b142a20ec14a91d5bc708c1dc21b080c550113d8aa77afa29635673a65dd02c5"
 
 [[package]]
 name = "zmij"
-version = "1.0.21"
+version = "1.0.23"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b8848ee67ecc8aedbaf3e4122217aff892639231befc6a1b58d29fff4c2cabaa"
+checksum = "29666d0abbfad1e3dc4dcf6144730dd3a3ab225bbbdac83319345b1b44ccfc1b"
 
 [[package]]
 name = "zstd"
diff --git a/Cargo.toml b/Cargo.toml
index b9cbba0..0ef28ff 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "fg-mako"
-version = "0.1.3"
+version = "0.1.4"
 edition = "2024"
 rust-version = "1.93.0"
 authors = ["Nils Homer <nils@fulcrumgenomics.com>"]