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Your font issue is entirely my fault, I missed out the line that gets the system fonts sorry about that. By the way the you don't need a show rule for equations in the math preamble as it only gets prepended to math blocks. It won't affect code blocks.
Why your code block looks like that I do not know with out your source.
I'm trying to switch my math font to use firamath: https://github.com/firamath/firamath
I have installed firamath locally to my system, enabled "Search System Fonts", and reloaded the plugin.
My math block preamble contains this line:
My code blocks look broken however:

I've tried many different math fonts, and there doesn't appear to be any change. Any suggestions?
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