- Changing the number of compartments:
cell.branch(0).set_ncomp(4)(#436, #440, #445, @michaeldeistler, @jnsbck) - New options for plotting:
cell.vis(type='comp')andcell.vis(type='morph')(#432, #437, @jnsbck) - Speed optimization for
jx.integrate(..., voltage_solver="jaxley.stone")(#442, @michaeldeistler)
- new website powered by sphinx:
jaxley.readthedocs.io(#434, #435, @michaeldeistler)
- New solver:
jx.integrate(..., voltage_solver="jax.sparse")which has very low compile time (#418, @michaeldeistler) - Support for different number of compartments per branch at initilization (modifying the number of compartments after initialization is not yet supported, #418, #426, @michaeldeistler)
- Bugfix for capacitances and their interplay with axial conductances (Thanks @Tunenip, #426, @michaeldeistler)
- Bugfixes for tutorials on website
- Bugfix for using
statesininit_stateof the channel (#421, @michaeldeistler) - Bugfix for tutorial on building custom channels (#421, @michaeldeistler)
- Add
jaxley-mechasdevdependency to use it in testsing (#421, @michaeldeistler)
- Cranck-Nicolson solver (#413, @michaeldeistler)
- Forward Euler solver for compartments and branches (#413, @michaeldeistler)
- Add option to access
statesinchannel.init_state(#416, @michaeldeistler)
- Bugfix for interpolation of x, y, z values (#411, @jnsbck)
- Minor fixups for README, website, and PyPI landing page
- Minor fixups for README, website, and PyPI landing page
- First public version