-
Notifications
You must be signed in to change notification settings - Fork 11
/
README.Rmd
96 lines (62 loc) · 4.62 KB
/
README.Rmd
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
---
output: github_document
---
# Social mixing matrices for infectious disease modelling in R
<!-- badges: start -->
[![CRAN version](https://www.r-pkg.org/badges/version-ago/socialmixr)](https://cran.r-project.org/package=socialmixr)
[![R-CMD-check](https://github.com/epiforecasts/socialmixr/workflows/R-CMD-check/badge.svg)](https://github.com/epiforecasts/socialmixr/actions)
[![Codecov test coverage](https://codecov.io/gh/epiforecasts/socialmixr/graph/badge.svg)](https://app.codecov.io/gh/epiforecasts/socialmixr)
<!-- badges: end -->
[socialmixr](https://github.com/epiforecasts/socialmixr) is an `R` package to derive social mixing matrices from survey data.
# Installation
The package can be installed using
```r
install.packages("socialmixr")
```
The current development version can be installed using the `remotes` package
```r
remotes::install_github("epiforecasts/socialmixr")
```
# Documentation
For information on how to use the socialmixr package, see the [introduction vignette](https://epiforecasts.io/socialmixr/articles/socialmixr.html).
## Contributors
<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->
<!-- prettier-ignore-start -->
<!-- markdownlint-disable -->
All contributions to this project are gratefully acknowledged using the [`allcontributors` package](https://github.com/ropensci/allcontributors) following the [all-contributors](https://allcontributors.org) specification. Contributions of any kind are welcome!
### Code
<a href="https://github.com/epiforecasts/socialmixr/commits?author=sbfnk">sbfnk</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=Bisaloo">Bisaloo</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=lwillem">lwillem</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=alxsrobert">alxsrobert</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=Degoot-AM">Degoot-AM</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=pearsonca">pearsonca</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=jarvisc1">jarvisc1</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=jamesmbaazam">jamesmbaazam</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=mariabnd">mariabnd</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=samclifford">samclifford</a>,
<a href="https://github.com/epiforecasts/socialmixr/commits?author=TimTaylor">TimTaylor</a>
### Issue Authors
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Abastistician">bastistician</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3ABlackEdder">BlackEdder</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3APinzo1">Pinzo1</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Aflorpi">florpi</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Acchauve">cchauve</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Athutran">thutran</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Adlaydon">dlaydon</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Adeusthindwa">deusthindwa</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Akrivit">krivit</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Alinyang17">linyang17</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Acliu822">cliu822</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3ANaomiWaterlow">NaomiWaterlow</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Aaakhmetz">aakhmetz</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Aadamkucharski">adamkucharski</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+author%3Achitrams">chitrams</a>
### Issue Contributors
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+commenter%3Avikkytom">vikkytom</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+commenter%3Anjtierney">njtierney</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+commenter%3Abahadzie">bahadzie</a>,
<a href="https://github.com/epiforecasts/socialmixr/issues?q=is%3Aissue+commenter%3Ajoshwlambert">joshwlambert</a>
<!-- markdownlint-enable -->
<!-- prettier-ignore-end -->
<!-- ALL-CONTRIBUTORS-LIST:END -->