DESCRIPTION

Type: Package
Package: SCpubr
Title: Generate Publication Ready Visualizations of Single Cell
    Transcriptomics Data
Version: 2.0.2.9000
Authors@R: 
    person("Enrique", "Blanco-Carmona", , "scpubr@gmail.com", role = c("cre", "aut"),
           comment = c(ORCID = "0000-0002-1208-1691"))
Description: A system that provides a streamlined way of generating
    publication ready plots for known Single-Cell transcriptomics data in
    a “publication ready” format. This is, the goal is to automatically
    generate plots with the highest quality possible, that can be used
    right away or with minimal modifications for a research article.
License: GPL-3
URL: https://github.com/enblacar/SCpubr/,
    https://enblacar.github.io/SCpubr-book/
BugReports: https://github.com/enblacar/SCpubr/issues/
Depends: 
    R (>= 4.0.0)
Suggests:
    assertthat,
    circlize,
    cli,
    cluster,
    colorspace,
    ComplexHeatmap,
    covr,
    decoupleR,
    dplyr (>= 1.1.0),
    enrichplot,
    forcats,
    ggalluvial (>= 0.12.5),
    ggbeeswarm,
    ggdist,
    ggExtra,
    ggh4x,
    ggplot2 (>= 3.4.0),
    ggplotify,
    ggrastr,
    ggrepel,
    ggridges,
    ggsignif,
    graphics,
    infercnv,
    knitr,
    labeling,
    magrittr,
    MASS,
    Matrix,
    methods,
    Nebulosa,
    org.Hs.eg.db,
    patchwork,
    pheatmap,
    plyr,
    purrr,
    qpdf,
    RColorBrewer,
    rjags,
    rlang,
    rmarkdown,
    scales,
    scattermore,
    Seurat,
    SeuratObject,
    sf,
    stringr,
    svglite,
    testthat (>= 3.0.0),
    tibble,
    tidyr,
    UCell,
    viridis,
    waffle,
    withr,
    liana (>= 0.1.6)
Remotes: 
    saezlab/liana
VignetteBuilder: 
    knitr
biocViews: Software, SingleCell, Visualization
Config/testthat/edition: 3
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.1