diff --git a/x-pack/test/fleet_api_integration/apis/epm/setup.ts b/x-pack/test/fleet_api_integration/apis/epm/setup.ts
index ac43d7a141a25..001cab435d75b 100644
--- a/x-pack/test/fleet_api_integration/apis/epm/setup.ts
+++ b/x-pack/test/fleet_api_integration/apis/epm/setup.ts
@@ -32,9 +32,9 @@ export default function (providerContext: FtrProviderContext) {
       await uninstallPackage('deprecated', '0.1.0');
       await uninstallPackage('multiple_versions', '0.3.0');
     });
-    // FLAKY: https://github.com/elastic/kibana/issues/118479
-    describe.skip('setup performs upgrades', async () => {
-      const oldEndpointVersion = '0.13.0';
+
+    describe('setup performs upgrades', async () => {
+      const oldEndpointVersion = '1.0.0';
       beforeEach(async () => {
         const url = '/api/fleet/epm/packages/endpoint';
         await supertest.delete(url).set('kbn-xsrf', 'xxxx').send({ force: true }).expect(200);