Add missing includes for size_t

Author: mmore500

Diff for: include/emp/Evolve/NK-const.hpp

@@ -14,6 +14,7 @@
 #define EMP_EVOLVE_NK_CONST_HPP_INCLUDE
 
 #include <array>
+#include <stddef.h>
 
 #include "../base/assert.hpp"
 #include "../bits/BitSet.hpp"

Diff for: include/emp/Evolve/NK.hpp

@@ -19,6 +19,7 @@
 #define EMP_EVOLVE_NK_HPP_INCLUDE
 
 #include <array>
+#include <stddef.h>
 
 #include "../base/vector.hpp"
 #include "../bits/BitVector.hpp"

Diff for: include/emp/Evolve/OEE.hpp

@@ -11,6 +11,7 @@
 #define EMP_EVOLVE_OEE_HPP_INCLUDE
 
 #include <deque>
+#include <stddef.h>
 
 #include "../base/Ptr.hpp"
 #include "../base/vector.hpp"

Diff for: include/emp/Evolve/Resource.hpp

@@ -15,6 +15,7 @@
 #ifndef EMP_EVOLVE_RESOURCE_HPP_INCLUDE
 #define EMP_EVOLVE_RESOURCE_HPP_INCLUDE
 
+#include <stddef.h>
 
 #include "World.hpp"
 

Diff for: include/emp/Evolve/StateGrid.hpp

@@ -21,6 +21,7 @@
 
 
 #include <map>
+#include <stddef.h>
 #include <string>
 
 #include "../base/assert.hpp"

Diff for: include/emp/Evolve/Systematics.hpp

@@ -26,6 +26,7 @@
 #include <map>
 #include <ostream>
 #include <set>
+#include <stddef.h>
 #include <unordered_set>
 
 #include "../base/Ptr.hpp"

Diff for: include/emp/Evolve/World.hpp

@@ -28,6 +28,7 @@
 
 #include <functional>
 #include <map>
+#include <stddef.h>
 #include <unordered_map>
 
 #include "../base/Ptr.hpp"

Diff for: include/emp/Evolve/World_iterator.hpp

@@ -15,6 +15,8 @@
 #ifndef EMP_EVOLVE_WORLD_ITERATOR_HPP_INCLUDE
 #define EMP_EVOLVE_WORLD_ITERATOR_HPP_INCLUDE
 
+#include <stddef.h>
+
 #include "../base/Ptr.hpp"
 
 namespace emp {

Diff for: include/emp/Evolve/World_output.hpp

@@ -12,6 +12,8 @@
 #ifndef EMP_EVOLVE_WORLD_OUTPUT_HPP_INCLUDE
 #define EMP_EVOLVE_WORLD_OUTPUT_HPP_INCLUDE
 
+#include <stddef.h>
+
 #include "../base/vector.hpp"
 #include "../data/DataFile.hpp"   // Helper to determine when specific events should occur.
 #include "../tools/string_utils.hpp"

Diff for: include/emp/Evolve/World_select.hpp

@@ -12,6 +12,7 @@
 
 #include <functional>
 #include <map>
+#include <stddef.h>
 
 #include "../base/array.hpp"
 #include "../base/assert.hpp"

Diff for: include/emp/Evolve/World_structure.hpp

@@ -12,6 +12,7 @@
 
 #include <cstdint>
 #include <set>
+#include <stddef.h>
 
 #include "../base/array.hpp"
 #include "../base/assert.hpp"

Diff for: include/emp/base/Ptr.hpp

@@ -28,6 +28,7 @@
 #define EMP_BASE_PTR_HPP_INCLUDE
 
 #include <cstring>
+#include <stddef.h>
 #include <unordered_map>
 
 #include "assert.hpp"

Diff for: include/emp/base/_emscripten_assert_trigger.hpp

@@ -13,6 +13,7 @@
 
 #include <iostream>
 #include <sstream>
+#include <stddef.h>
 #include <string>
 
 #include <emscripten.h>

Diff for: include/emp/base/_emscripten_error_trigger.hpp

@@ -13,6 +13,7 @@
 #define EMP_BASE__EMSCRIPTEN_ERROR_TRIGGER_HPP_INCLUDE
 
 
+#include <stddef.h>
 #include <string>
 
 namespace emp {

Diff for: include/emp/base/_native_assert_trigger.hpp

@@ -13,6 +13,7 @@
 
 #include <iostream>
 #include <sstream>
+#include <stddef.h>
 #include <string>
 
 #include "_is_streamable.hpp"

Diff for: include/emp/base/_native_error_trigger.hpp

@@ -12,6 +12,7 @@
 #define EMP_BASE__NATIVE_ERROR_TRIGGER_HPP_INCLUDE
 
 
+#include <stddef.h>
 #include <string>
 
 namespace emp {

Diff for: include/emp/base/_tdebug_assert_trigger.hpp

@@ -11,6 +11,7 @@
 #ifndef EMP_BASE__TDEBUG_ASSERT_TRIGGER_HPP_INCLUDE
 #define EMP_BASE__TDEBUG_ASSERT_TRIGGER_HPP_INCLUDE
 
+#include <stddef.h>
 #include <string>
 
 namespace emp {

Diff for: include/emp/base/_tdebug_error_trigger.hpp

@@ -12,6 +12,7 @@
 #define EMP_BASE__TDEBUG_ERROR_TRIGGER_HPP_INCLUDE
 
 
+#include <stddef.h>
 #include <string>
 
 namespace emp {

Diff for: include/emp/base/array.hpp

@@ -20,6 +20,7 @@
 
 #include <array>
 #include <initializer_list>
+#include <stddef.h>
 #include <vector>
 
 #include "assert.hpp"

Diff for: include/emp/base/errors.hpp

@@ -42,6 +42,7 @@
 #include <iostream>
 #include <map>
 #include <sstream>
+#include <stddef.h>
 #include <string>
 
 /// If we are in emscripten, make sure to include the header.

Diff for: include/emp/base/map.hpp

@@ -19,6 +19,7 @@
 
 #include <initializer_list>
 #include <map>
+#include <stddef.h>
 
 #include "assert.hpp"
 #include "MapProxy.hpp"

Diff for: include/emp/base/optional.hpp

@@ -15,6 +15,7 @@
 #define EMP_BASE_OPTIONAL_HPP_INCLUDE
 
 #include <optional>
+#include <stddef.h>
 #include <type_traits>
 #include <utility>
 

Diff for: include/emp/base/unordered_map.hpp

@@ -12,6 +12,7 @@
 #define EMP_BASE_UNORDERED_MAP_HPP_INCLUDE
 
 #include <initializer_list>
+#include <stddef.h>
 #include <unordered_map>
 
 #include "assert.hpp"

Diff for: include/emp/base/vector.hpp

@@ -22,6 +22,7 @@
 
 #include <initializer_list>
 #include <iterator>
+#include <stddef.h>
 #include <utility>
 #include <vector>
 

Diff for: include/emp/bits/BitArray.hpp

@@ -21,6 +21,7 @@
 #include <cstring>
 #include <initializer_list>
 #include <iostream>
+#include <stddef.h>
 
 #include "../base/assert.hpp"
 #include "../base/Ptr.hpp"

Diff for: include/emp/bits/BitMatrix.hpp

@@ -12,6 +12,7 @@
 #define EMP_BITS_BITMATRIX_HPP_INCLUDE
 
 #include <iostream>
+#include <stddef.h>
 #include <typeinfo>
 
 

Diff for: include/emp/bits/BitSet.hpp

@@ -12,6 +12,7 @@
 #ifndef EMP_BITS_BITSET_HPP_INCLUDE
 #define EMP_BITS_BITSET_HPP_INCLUDE
 
+#include <stddef.h>
 
 #include "BitArray.hpp"
 

Diff for: include/emp/bits/BitVector.hpp

@@ -34,6 +34,7 @@
 #include <cstring>
 #include <initializer_list>
 #include <iostream>
+#include <stddef.h>
 
 #include "../base/assert.hpp"
 #include "../base/Ptr.hpp"

Diff for: include/emp/bits/_bitset_helpers.hpp

@@ -10,6 +10,7 @@
 #ifndef EMP_BITS__BITSET_HELPERS_HPP_INCLUDE
 #define EMP_BITS__BITSET_HELPERS_HPP_INCLUDE
 
+#include <stddef.h>
 
 namespace emp {
 

Diff for: include/emp/bits/bitset_utils.hpp

@@ -12,6 +12,7 @@
 #define EMP_BITS_BITSET_UTILS_HPP_INCLUDE
 
 #include <cstdint>
+#include <stddef.h>
 
 namespace emp {
 

Diff for: include/emp/compiler/DFA.hpp

@@ -13,6 +13,7 @@
 
 #include <cstdint>
 #include <limits>
+#include <stddef.h>
 #include <string>
 
 #include "../base/array.hpp"

Diff for: include/emp/compiler/Lexer.hpp

@@ -13,6 +13,7 @@
 
 #include <cstdint>
 #include <map>
+#include <stddef.h>
 #include <string>
 
 #include "../base/map.hpp"

Diff for: include/emp/compiler/NFA.hpp

@@ -26,6 +26,7 @@
 #include <cstdint>
 #include <map>
 #include <set>
+#include <stddef.h>
 
 #include "../base/vector.hpp"
 #include "../bits/BitSet.hpp"

Diff for: include/emp/compiler/RegEx.hpp

@@ -39,6 +39,7 @@
 
 #include <ostream>
 #include <sstream>
+#include <stddef.h>
 #include <string>
 
 #include "../base/Ptr.hpp"

Diff for: include/emp/compiler/lexer_utils.hpp

@@ -13,6 +13,7 @@
 
 
 #include <map>
+#include <stddef.h>
 #include <utility> // std::pair
 
 #include "../base/vector.hpp"

Diff for: include/emp/config/ArgManager.hpp

@@ -18,6 +18,7 @@
 #include <map>
 #include <numeric>
 #include <set>
+#include <stddef.h>
 #include <string>
 #include <vector>
 

Diff for: include/emp/config/SettingCombos.hpp

@@ -12,6 +12,7 @@
 #define EMP_CONFIG_SETTINGCOMBOS_HPP_INCLUDE
 
 #include <sstream>
+#include <stddef.h>
 #include <string>
 #include <string_view>
 #include <unordered_map>

Diff for: include/emp/config/SettingConfig.hpp

@@ -12,6 +12,7 @@
 #define EMP_CONFIG_SETTINGCONFIG_HPP_INCLUDE
 
 #include <sstream>
+#include <stddef.h>
 #include <string>
 #include <string_view>
 #include <unordered_map>

Diff for: include/emp/config/command_line.hpp

@@ -34,6 +34,7 @@
 #ifndef EMP_CONFIG_COMMAND_LINE_HPP_INCLUDE
 #define EMP_CONFIG_COMMAND_LINE_HPP_INCLUDE
 
+#include <stddef.h>
 #include <string>
 
 #include "../base/vector.hpp"

Diff for: include/emp/config/config.hpp

@@ -42,6 +42,7 @@
 #include <functional>
 #include <ostream>
 #include <sstream>
+#include <stddef.h>
 #include <string>
 #include <unordered_set>
 

Diff for: include/emp/config/config_web_interface.hpp

@@ -12,6 +12,7 @@
 
 #include <map>
 #include <set>
+#include <stddef.h>
 
 #include "../datastructs/set_utils.hpp"
 #include "../tools/string_utils.hpp"

Diff for: include/emp/control/Action.hpp

@@ -15,6 +15,7 @@
 #define EMP_CONTROL_ACTION_HPP_INCLUDE
 
 #include <functional>
+#include <stddef.h>
 #include <string>
 
 namespace emp {

Diff for: include/emp/control/ActionManager.hpp

@@ -11,6 +11,7 @@
 #ifndef EMP_CONTROL_ACTIONMANAGER_HPP_INCLUDE
 #define EMP_CONTROL_ACTIONMANAGER_HPP_INCLUDE
 
+#include <stddef.h>
 #include <string>
 #include <unordered_map>
 

Diff for: include/emp/control/Signal.hpp

@@ -17,6 +17,7 @@
 
 #include <cstdint>
 #include <map>
+#include <stddef.h>
 #include <string>
 
 #include "../datastructs/map_utils.hpp"

Diff for: include/emp/control/SignalControl.hpp

@@ -18,6 +18,7 @@
 #define EMP_CONTROL_SIGNALCONTROL_HPP_INCLUDE
 
 #include <cstdint>
+#include <stddef.h>
 #include <string>
 #include <unordered_map>
 

Diff for: include/emp/control/SignalManager.hpp

@@ -12,6 +12,7 @@
 #define EMP_CONTROL_SIGNALMANAGER_HPP_INCLUDE
 
 #include <cstdint>
+#include <stddef.h>
 #include <string>
 #include <unordered_map>
 

Diff for: include/emp/data/DataFile.hpp

@@ -13,6 +13,7 @@
 #include <fstream>
 #include <functional>
 #include <iostream>
+#include <stddef.h>
 #include <string>
 
 #include "../base/assert.hpp"

Diff for: include/emp/data/DataInterface.hpp

@@ -10,6 +10,7 @@
 #ifndef EMP_DATA_DATAINTERFACE_HPP_INCLUDE
 #define EMP_DATA_DATAINTERFACE_HPP_INCLUDE
 
+#include <stddef.h>
 
 #include "DataNode.hpp"
 

Diff for: include/emp/data/DataLayout.hpp

@@ -11,6 +11,7 @@
 #ifndef EMP_DATA_DATALAYOUT_HPP_INCLUDE
 #define EMP_DATA_DATALAYOUT_HPP_INCLUDE
 
+#include <stddef.h>
 #include <string>
 #include <unordered_map>