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Closes #5734
Closes #4473
Closes #4498
Closes #659
Closes #2237
xref https://github.com/pangeo-data/pangeo/issues/271
Co-authored-by: Anderson Banihirwe <[email protected]>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Illviljan <[email protected]>
Co-authored-by: Mathias Hauser <[email protected]>
Co-authored-by: Stephan Hoyer <[email protected]>
Squashed commit of the following:
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Merge: 3ab03ee09 c34ef8a60
Author: Anderson Banihirwe <[email protected]>
Date: Thu May 12 17:49:31 2022 -0600
Merge branch 'main' into groupby-aggs-using-numpy-groupies
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Merge: ad33d8512 11041bdfd
Author: Anderson Banihirwe <[email protected]>
Date: Wed May 11 13:31:45 2022 -0600
Merge branch 'main' into groupby-aggs-using-numpy-groupies
commit ad33d85123dc28a374b1dfee41a2a35aba4a654c
Author: dcherian <[email protected]>
Date: Tue May 10 13:20:02 2022 -0600
Deduplicate
commit fd20ba2d7447331bed47030fa80bf20735835a1f
Author: dcherian <[email protected]>
Date: Tue May 10 11:54:00 2022 -0600
Update whats-new
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Author: Illviljan <[email protected]>
Date: Mon May 9 22:16:50 2022 +0200
Ignore typing when flox is not available
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Date: Thu May 5 23:21:23 2022 +0200
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Author: Illviljan <[email protected]>
Date: Thu May 5 23:21:09 2022 +0200
Update resample.py
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Date: Thu May 5 23:11:21 2022 +0200
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Date: Thu May 5 23:09:01 2022 +0200
Copy/paste instead of a for loop
Hopefully mypy will be satisfied
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Author: Illviljan <[email protected]>
Date: Thu May 5 22:34:09 2022 +0200
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commit 444feee5c0176390f4e0bf95a32decf179e5d9f2
Author: Illviljan <[email protected]>
Date: Thu May 5 22:32:19 2022 +0200
Try subclassing to ResampleBase-classes
Resample assumes having self._group_dim but that was never defined earlier, mypy should complain about this if the class was typed.
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Author: Illviljan <[email protected]>
Date: Thu May 5 20:55:45 2022 +0200
Update resample.py
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Author: Illviljan <[email protected]>
Date: Thu May 5 20:46:49 2022 +0200
Update _reductions.py
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Author: Illviljan <[email protected]>
Date: Thu May 5 20:19:53 2022 +0200
Update _reductions.py
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Author: Illviljan <[email protected]>
Date: Thu May 5 20:02:30 2022 +0200
Test adding back dummy methods.
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Author: Anderson Banihirwe <[email protected]>
Date: Wed May 4 21:50:36 2022 -0600
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Date: Wed May 4 09:15:40 2022 -0600
Clean up resampling.
Add Resample._flox_reduce.
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Date: Tue May 3 09:58:01 2022 -0600
[skip-ci] Fix whats-new.
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Better defaults for resample
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[skip-ci] add whats-new
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HTML repr fix for Furo Sphinx theme (#6501)
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Accessing the Exception message via e.args[0] (#6451)
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allow other and drop arguments in where (gh#6466) (#6467)
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...
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Date: Wed Apr 13 11:36:40 2022 -0600
Update ci/requirements/environment-windows.yml
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Author: Anderson Banihirwe <[email protected]>
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Date: Tue Mar 29 19:44:12 2022 +0530
Merge branch 'main' into groupby-aggs-using-numpy-groupies
* main: (23 commits)
Vectorize groupby binary ops (#6160)
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[pre-commit.ci] pre-commit autoupdate (#6422)
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[skip-ci] Add benchmarks for groupby math (#6390)
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isel: convert IndexVariable to Variable if index is dropped (#6388)
fix dataset groupby combine dataarray func (#6386)
fix concat with variable or dataarray as dim (#6387)
#6367 Fix for time units checking could produce "unhashable type" error (#6368)
Explicit indexes (#5692)
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Allow write_empty_chunks to be set in Zarr encoding (#6348)
...
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Date: Sun Mar 13 11:10:49 2022 +0530
Test flox kwargs
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loooser test
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Generate reductions for DataArray, Dataset, GroupBy and Resample (#5950)
explicitly install `ipython_genutils` (#6350)
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* generate-reductions-class: (31 commits)
polish
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Fixes
Apply suggestions from code review
Fix path
manual tweaks to make ci happy
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force keyword args after dim
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Merge branch 'main' into groupby-aggs-using-numpy-groupies
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Bump actions/setup-python from 2 to 3 (#6338)
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...
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Author: dcherian <[email protected]>
Date: Tue Mar 8 17:48:00 2022 -0700
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Bump actions/setup-python from 2 to 3 (#6338)
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...
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Fixes
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Date: Wed Feb 16 09:50:49 2022 -0700
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Author: dcherian <[email protected]>
Date: Wed Feb 16 09:46:04 2022 -0700
Merge branch 'main' into generate-reductions-class
* main: (32 commits)
Small typing fix (#6159)
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Use base ImportError not MoudleNotFoundError when trying to see if the (#6154)
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...
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Author: Anderson Banihirwe <[email protected]>
Date: Thu Jan 13 15:07:31 2022 -0700
Merge branch 'main' into groupby-aggs-using-numpy-groupies
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Date: Wed Jan 12 17:02:49 2022 -0700
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* upstream/main:
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Date: Wed Jan 12 11:18:24 2022 -0700
Merge remote-tracking branch 'upstream/main' into groupby-aggs-using-numpy-groupies
* upstream/main: (23 commits)
Small typing fix (#6159)
Drop support for python 3.7 (#5892)
_season_from_months can now handle np.nan (#5876)
Use base ImportError not MoudleNotFoundError when trying to see if the (#6154)
Remove numpy from mypy pre-commit (#6151)
Change concat dims to be Hashable (#6121)
Bump pypa/gh-action-pypi-publish from 1.4.2 to 1.5.0 (#6147)
Remove registration of pandas datetime converter in plotting (#6109)
Remove pd.Panel checks (#6145)
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Revert "Deprecate bool(ds) (#6126)" (#6141)
remove paren from data that is fed to 1D DataArray (#6139)
Check for just `...`, rather than `[...]` in `da.stack` (#6132)
DOC: Add "auto" to dataarray `chunk` method (#6068)
TST: check datetime converter is Matplotlibs (#6128)
New algorithm for forward filling (#6118)
Limit and format number of displayed dimensions in repr (#5662)
Add labels to dataset diagram (#6076)
Deprecate bool(ds) (#6126)
Revert "disable pytest-xdist (to check CI failure)" (#6127)
...
commit 41e43fe22e39179310032b7b9927e094721e332f
Author: dcherian <[email protected]>
Date: Wed Dec 29 17:08:38 2021 -0700
fix tests
commit 70266e176b60763dc84dc8c6852039014c0032c6
Author: dcherian <[email protected]>
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fix tests
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Attempt fixing typing errors
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Date: Mon Nov 8 16:40:20 2021 -0700
Refactored generator
commit f06e6a7d5ec6575df9ac6772c6092dfa81980ae8
Author: dcherian <[email protected]>
Date: Mon Nov 8 16:24:11 2021 -0700
Revert "Separate out median"
This reverts commit 932b9a5d668278019bbd75ea23582ff28a463b91.
commit dea8fd9f326a543807c26b6a62e84b28b5cb4cc3
Author: dcherian <[email protected]>
Date: Mon Nov 8 16:18:07 2021 -0700
REfactor
commit 9bb2c321e8df2f5978c40a1c3c8f891c77e847ff
Author: dcherian <[email protected]>
Date: Mon Nov 8 13:56:53 2021 -0700
Reorder docstring to match numpy
commit 08911b9a155ca7a2f95b466fba1f97538d45f1a6
Merge: a2168df2d 20fddb7e3
Author: dcherian <[email protected]>
Date: Mon Nov 8 13:58:11 2021 -0700
Merge remote-tracking branch 'upstream/main' into groupby-aggs-using-numpy-groupies
* upstream/main:
Add groupby & resample benchmarks (#5922)
Fix plot.line crash for data of shape (1, N) in _title_for_slice on format_item (#5948)
Disable unit test comments (#5946)
Publish test results from workflow_run only (#5947)
commit 99bfe128066ec3ef1b297650a47e2dd0a45801a8
Author: dcherian <[email protected]>
Date: Mon Nov 8 12:44:23 2021 -0700
Fixes #5898
commit 7f39cc0d8c664e3fcf354536ed3a95882064b4b6
Author: dcherian <[email protected]>
Date: Mon Nov 8 12:39:00 2021 -0700
Minor docstring improvements.
commit a04ed824a55b757937a4db4aa65729dccf62c1a7
Author: dcherian <[email protected]>
Date: Mon Nov 8 12:35:48 2021 -0700
Small changes
commit 816e7941e47b14280103d5d10da94139f394c0cd
Author: dcherian <[email protected]>
Date: Sun Nov 7 20:56:37 2021 -0700
Generate DataArray, Dataset reductions too.
commit 569c67f28b3e7ff4c475793325a4388220932d02
Author: dcherian <[email protected]>
Date: Sun Nov 7 20:54:42 2021 -0700
Add ddof for var, std
commit 6b9a81a6fbe3ba460d905f0e92105d8e25af3ebb
Author: dcherian <[email protected]>
Date: Sun Nov 7 20:35:52 2021 -0700
Better generator for reductions.
commit a2168df2d595c4220a989fb99569196e0951d92f
Author: dcherian <[email protected]>
Date: Fri Nov 5 22:09:22 2021 -0600
typo again
commit d238459ae2bbe2a38f855e12ca4752c2fd28051c
Author: dcherian <[email protected]>
Date: Fri Nov 5 21:50:30 2021 -0600
any,all
commit ac85e72607594daf014e6afa50966289d5c1cc7f
Author: dcherian <[email protected]>
Date: Fri Nov 5 21:31:22 2021 -0600
make dask_groupby actually optional
commit 932b9a5d668278019bbd75ea23582ff28a463b91
Author: dcherian <[email protected]>
Date: Fri Nov 5 21:27:23 2021 -0600
Separate out median
commit ad25f78be0250de7cc574c7941b2149015dde26c
Author: dcherian <[email protected]>
Date: Fri Nov 5 19:52:36 2021 -0600
Add to asv env
commit 3608e9fa135ac93231cbf4f8bff007887a10e19d
Author: dcherian <[email protected]>
Date: Fri Nov 5 15:26:28 2021 -0600
get working again
commit faee02c7cb95dcc97a71e2fb0b2627c0ca49f2ed
Author: dcherian <[email protected]>
Date: Fri Nov 5 12:37:36 2021 -0600
fix env stuff + remove env var
commit 77f0e0e0765bcf335222ea0aad58b3700a76ea29
Merge: 0f2c59f7c 1ecf91a4d
Author: dcherian <[email protected]>
Date: Fri Nov 5 12:33:04 2021 -0600
Merge remote-tracking branch 'upstream/main' into groupby-aggs-using-numpy-groupies
* upstream/main: (27 commits)
Generator for groupby reductions (#5871)
whats-new dev
whats-new for 0.20.1 (#5943)
Docs: fix URL for PTSA (#5935)
Fix a missing @requires_zarr in tests (#5936)
fix the detection of backend entrypoints (#5931)
Explicitly list all reductions in api.rst (#5903)
DOC: add names of missing contributors to 0.20.0 (#5932)
new whats-new.rst section
Update open_rasterio deprecation version number (#5916)
v0.20 Release notes (#5924)
[skip-ci] v0.20.0: whats-new for release (#5905)
Update minimum dependencies for 0.20 (#5917)
Bump actions/github-script from 4.1 to 5 (#5826)
remove requirement for setuptools.pkg_resources (#5845)
Update docstring for apply_ufunc, set_options (#5904)
Display coords' units for slice plots (#5847)
Combine by coords dataarray bugfix (#5834)
Add .chunksizes property (#5900)
Add typing_extensions as a required dependency (#5911)
...
commit 0f2c59f7c31f8d2cd06d64ec3f4d69d87d2eeb85
Merge: 4b25db574 df7646182
Author: Anderson Banihirwe <[email protected]>
Date: Tue Oct 26 17:01:49 2021 -0600
Merge branch 'main' of github.com:pydata/xarray into groupby-aggs-using-numpy-groupies
commit 4b25db574d9f13059d3b0d6319ae18f9e534b6d6
Merge: e3b3a00c6 262a3f5dd
Author: dcherian <[email protected]>
Date: Tue Oct 5 14:49:30 2021 +0530
Merge branch 'groupby-aggs-using-numpy-groupies' of github.com:andersy005/xarray into groupby-aggs-using-numpy-groupies
* 'groupby-aggs-using-numpy-groupies' of github.com:andersy005/xarray:
Update ci/requirements/environment-windows.yml
commit e3b3a00c6a1e1e8cc8e20c1f2a1051efaafe9297
Author: dcherian <[email protected]>
Date: Tue Oct 5 14:48:25 2021 +0530
Fix resampling
commit 262a3f5dd3a22f82a719d61ac7a95758fa1d2e9b
Author: Deepak Cherian <[email protected]>
Date: Mon Oct 4 11:10:44 2021 +0530
Update ci/requirements/environment-windows.yml
commit 9b44db9e6d3db00ab8301fe426768925e8a2ff2f
Author: dcherian <[email protected]>
Date: Mon Oct 4 10:45:39 2021 +0530
Fix keep_attrs test
commit b97ffcb37b416e93c5481d6ce363f74e61e88dbc
Author: dcherian <[email protected]>
Date: Mon Oct 4 10:44:04 2021 +0530
Fix windows env
commit f4748ee80fc993f9fd9a8b4dd76d242c778b64ae
Author: dcherian <[email protected]>
Date: Mon Oct 4 10:28:08 2021 +0530
typo
commit 1d9a36053181aeedbc90c3eec5a3457327630771
Author: dcherian <[email protected]>
Date: Mon Oct 4 10:21:33 2021 +0530
Add CI for now
commit 462e61b79f6ecfef24275622e84378673f9e9950
Author: dcherian <[email protected]>
Date: Mon Oct 4 10:16:15 2021 +0530
Don't pass numeric_only to DataArray.reduce
Tests pass!
commit b1e3ab25e85ad3df302209c22639e6af11b1d443
Author: dcherian <[email protected]>
Date: Sun Oct 3 17:37:07 2021 +0530
Raise error when reducing along indexed dimensions with squeeze=True
commit 69fd5638c45fbfe374aba6494586bd8b48aee652
Author: dcherian <[email protected]>
Date: Sun Oct 3 17:30:10 2021 +0530
Avoid forwarding DummyGroup objects
commit 58c1c6b7f6158af51553249389f6da1651c97b08
Author: dcherian <[email protected]>
Date: Sun Oct 3 16:06:57 2021 +0530
Add _dask_groupby_kwargs
commit af4cc5d44ff95e0a4aace6e867de26b1f94e63fd
Author: dcherian <[email protected]>
Date: Sun Oct 3 16:05:31 2021 +0530
Fix reduce methods
commit cdf7612b6deac9f4b1b793d2f0014507c6e289f9
Author: dcherian <[email protected]>
Date: Sun Oct 3 12:50:27 2021 +0530
Fix resample test
commit 489b2ffbc10eb62e94beee4b6fb3e2e55872d4b4
Merge: 4702c9d85 54dba584d
Author: Anderson Banihirwe <[email protected]>
Date: Sun Sep 26 15:47:30 2021 -0600
Merge branch 'main' into groupby-aggs-using-numpy-groupies
commit 4702c9d85ccfd835c1e59073a9588b8a7277f8a5
Merge: e6bcce903 9be0228af
Author: dcherian <[email protected]>
Date: Tue Aug 24 12:37:14 2021 -0600
Merge branch 'groupby-aggs-using-numpy-groupies' of github.com:andersy005/xarray into groupby_npg
* 'groupby-aggs-using-numpy-groupies' of github.com:andersy005/xarray:
Bump actions/github-script from 4.0.2 to 4.1 (#5730)
Set coord name concat when `concat`ing along a DataArray (#5611)
Add .git-blame-ignore-revs (#5708)
Type annotate tests (#5728)
Consolidate TypeVars in a single place (#5569)
add storage_options arg to to_zarr (#5615)
dataset `__repr__` updates (#5580)
Xfail failing test on main (#5729)
Add xarray-dataclasses to ecosystem in docs (#5725)
extend show_versions (#5724)
Move docstring for xr.set_options to numpy style (#5702)
Refactor more groupby and resample tests (#5707)
Remove suggestion to install pytest-xdist in docs (#5713)
Add typing to the OPTIONS dict (#5678)
Change annotations to allow str keys (#5690)
Whatsnew for float-to-top (#5714)
Use isort's float-to-top (#5695)
Fix errors in test_latex_name_isnt_split for min environments (#5710)
Improves rendering of complex LaTeX expressions as `long_name`s when plotting (#5682)
Use same bool validator as other inputs (#5703)
commit e6bcce9033db6da748f4b89057ef165cd6fcb6f7
Author: dcherian <[email protected]>
Date: Tue Aug 24 12:35:51 2021 -0600
some fixes
commit 9be0228afe1e625c707215a6a5d29c993ebdd90b
Merge: 35944e434 a6b44d720
Author: Anderson Banihirwe <[email protected]>
Date: Tue Aug 24 12:06:03 2021 -0600
Merge branch 'pydata:main' into groupby-aggs-using-numpy-groupies
commit 35944e434d30fdc9d4094248d0898ae8a249726c
Author: Anderson Banihirwe <[email protected]>
Date: Fri Aug 13 15:23:09 2021 -0600
Remove `_numpy_groupies.py` module
commit f0883921adf57d5c21ddb17ff9001ba8dba99514
Author: Anderson Banihirwe <[email protected]>
Date: Thu Aug 12 18:49:48 2021 -0600
Fix position keyword arguments
commit 3ee620018e7e6a742a4c6d107911196b22282332
Author: Anderson Banihirwe <[email protected]>
Date: Thu Aug 12 18:47:32 2021 -0600
Remove comments
commit 511dd448de6877f8af0d1356bf16bb20d481c209
Author: Anderson Banihirwe <[email protected]>
Date: Thu Aug 12 18:43:13 2021 -0600
Add more aggregations
commit ef91e6e24eb13a2974268be2c7e0479dbd219e5e
Author: Anderson Banihirwe <[email protected]>
Date: Thu Aug 12 18:24:03 2021 -0600
Add _numpy_groupies module
commit c486df7720edf547e336112a376a7d444f2f8778
Author: Anderson Banihirwe <[email protected]>
Date: Thu Aug 12 16:09:54 2021 -0600
Move `_reduce_method` classmethod to `groupby.py` module
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- asv_bench
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- ci
- requirements
- doc
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- core
- tests
- util
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