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Copy file name to clipboardExpand all lines: README.md
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## 1. Building cost matrix
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Here, we want to calculate cost matrix between different ROIs in two atlases. Then, we have to specify the names of two atlases with `-s` and `-t` and the task we want to learn mappings with `-task` .
The output will be stored in `T_source_target.csv` with `n` rows and`m` columns indicating number of ROIs in source and target respectively. Each row is a probability distribution exhibiting optimum assignment of values from the appropriate node to target nodes.
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