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KP.1 + S:R346T on Orf1a:G519S (11 seqs) #2603

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DailyCovidCases opened this issue May 23, 2024 · 3 comments
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KP.1 + S:R346T on Orf1a:G519S (11 seqs) #2603

DailyCovidCases opened this issue May 23, 2024 · 3 comments

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@DailyCovidCases
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DailyCovidCases commented May 23, 2024 •
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From branch 68 of sars-cov-2-variants/lineage-proposals#1089
KP.1 > Orf1a:G519S (G1820A)> S:R346T (G22599C)
Query: G1820A, A24819G, G22599C, T3565C
Samples: 5 (3 on UShER , Oman 2 USA 1)
usher
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@FedeGueli
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5 samples now

@FedeGueli FedeGueli mentioned this issue May 23, 2024
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@DailyCovidCases DailyCovidCases changed the title KP.1 + S:R346T on Orf1a:G519S (3 seqs on UShER) KP.1 + S:R346T on Orf1a:G519S (5 seqs) May 23, 2024
@DailyCovidCases DailyCovidCases changed the title KP.1 + S:R346T on Orf1a:G519S (5 seqs) KP.1 + S:R346T on Orf1a:G519S (11 seqs) Jul 4, 2024
@DailyCovidCases DailyCovidCases closed this as not planned Won't fix, can't repro, duplicate, stale Jul 4, 2024
@FedeGueli

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@FedeGueli
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this is now 25 with mayority samples coming from multiple countries in late June ( and a Canadian cluster) please reopen this.

Screenshot 2024-07-14 alle 10 40 15 https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/singleSubtreeAuspice_genome_test_3688a_38eae0.json?f_userOrOld=uploaded%20sample scratch that not monophyletic!!

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@FedeGueli @DailyCovidCases