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JN.1.4.5 + S:R346T that further gained S:T732I (77 seqs) #2601

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DailyCovidCases opened this issue May 21, 2024 · 4 comments
Closed

JN.1.4.5 + S:R346T that further gained S:T732I (77 seqs) #2601

DailyCovidCases opened this issue May 21, 2024 · 4 comments

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@DailyCovidCases
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From branch 16 of sars-cov-2-variants/lineage-proposals#1089
JN.1.4.5 (Orf8:S103L ) >C28201T > C28948T > S:R346T (G22599C) that further gained S:T732I
Query: C774T, C28948T, G22599C
Samples : 52 (China 3 Japan 41 Mexico 1 Myanmar 2 Singapore 3 Thailand 1 US 1)
First: EPI_ISL_18604882, 2023-11-30
Latest: EPI_ISL_19095925, 2024-4-19
usher
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@FedeGueli FedeGueli mentioned this issue May 21, 2024
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@DailyCovidCases DailyCovidCases changed the title JN.1.4.5 + S:R346T that further gained S:T732I (52 seqs, 7 countries) JN.1.4.5 + S:R346T that further gained S:T732I (65 seqs, 9 countries) Jul 4, 2024
@FedeGueli
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74 , but two only samples from June

@DailyCovidCases
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This branch is dead, I will close it now

@DailyCovidCases DailyCovidCases closed this as not planned Won't fix, can't repro, duplicate, stale Jul 18, 2024
@DailyCovidCases DailyCovidCases changed the title JN.1.4.5 + S:R346T that further gained S:T732I (65 seqs, 9 countries) JN.1.4.5 + S:R346T that further gained S:T732I (77 seqs) Sep 21, 2024
@DailyCovidCases
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DailyCovidCases commented Sep 21, 2024 •
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Tree now:
usher
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@corneliusroemer Is this branch worth a designation?

@FedeGueli
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82 with 2 from August one from France one from Singapore both without S:T732I

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@FedeGueli @DailyCovidCases