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FL.15(S:456L)+Orf1a:G400V,S2185N,T2007I, S:L455F (44 seqs, 9 countries, 24 with S:A475V) #2293

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xz-keg opened this issue Sep 21, 2023 · 2 comments

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@xz-keg
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xz-keg commented Sep 21, 2023

From sars-cov-2-variants/lineage-proposals#646
FL.15+G1464T(Orf1a:G400V)+C12890T+G6819A(Orf1a:S2185N)+A15456G, C6285T,G22927T(Orf1a:T2007I, S:L455F)

GISAID query: C6285T,G6819A,G22927T
No. of seqs: 27(Belgium 2 Canada 10 Romania 7 Japan 4 France 2 Italy 1 Germany 1)
The query can find 26, plus EPI_ISL_18213167 with missing coverage

GISAID query for S:A475V subbranch: C6285T,G6819A,G22927T,C22986T
No. of seqs: 18

First: EPI_ISL_18097851, Japan, 2023-6-30
Latest: EPI_ISL_18287942, Canada, 2023-9-14

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@FedeGueli
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32 with 455F and
24 with 455F +S:A475V now ( with sequences uploaded today from Spain, England, Romania and Australia)

ping @corneliusroemer this seems really fast i suggest a rapid designation of the whole FL.15 thing

@xz-keg
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xz-keg commented Sep 26, 2023

44, Spain, Australia

@xz-keg xz-keg changed the title FL.15(S:456L)+Orf1a:G400V,S2185N,T2007I, S:L455F (27 seqs, 7 countries, 18 with S:A475V) FL.15(S:456L)+Orf1a:G400V,S2185N,T2007I, S:L455F (44 seqs, 9 countries, 24 with S:A475V) Sep 26, 2023
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