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FL.19 with ORF1b:A1877V (nsp14_A353V) and S:F456L (24 seqs, 8 countries) #2138

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NkRMnZr opened this issue Jul 25, 2023 · 0 comments
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NkRMnZr commented Jul 25, 2023

Transferred from sars-cov-2-variants/lineage-proposals#442

Defining Mutations: FL.19 > C19097T(ORF1b:A1877V) > T12145C > C12952T > T22928C(S:F456L), G24757T
Query: C19097T, T22928C, G24757T
Earliest seq: 2023-04-25 (EPI_ISL_17651732, Italy)
Latest seq: 2023-06-24 (EPI_ISL_17974978, England)
Sampled Countries: USA (8, Puerto Rico/3, New York/2, Pennsylvania/2, DC/1), Canada (4, Alberta/3, Ontario/1), Italy (3), Spain (3), Austria (2), UK (2, England), France (1), Sweden (1)

Genomes: EPI_ISL_17651732, EPI_ISL_17788292, EPI_ISL_17790029, EPI_ISL_17799064, EPI_ISL_17831090, EPI_ISL_17838235, EPI_ISL_17853781, EPI_ISL_17854392, EPI_ISL_17854394, EPI_ISL_17854546, EPI_ISL_17859350, EPI_ISL_17881118, EPI_ISL_17881212, EPI_ISL_17974978, EPI_ISL_17980000, EPI_ISL_17986640, EPI_ISL_17989448, EPI_ISL_18007753, EPI_ISL_18007773, EPI_ISL_17813097, EPI_ISL_18010391, EPI_ISL_18011730, EPI_ISL_18030084, EPI_ISL_18030470, EPI_ISL_18026769

UShER:
https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_17b7e_fc3ee0.json?f_userOrOld=uploaded%20sample

view from FL.19 polytomy
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