We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
New lineage proposal for B.1.1.74 with multiple spike mutations by Erik Alm
Description Sub-lineage of: B.1.1.74 Earliest sequence: 2021-01-07 Most recent sequence: 2021-02-07 Countries circulating: Nigeria, UK, USA
Multiple spike mutations and NSP6 deletion commonly seen in VOCs compared to ancestral lineage, already spread to multiple countries. Spike D614G, Spike D796H, Spike E484K, Spike P681H, Spike T95I, Spike Y144del NSP6 106-108del
Evidence, see new lineage.txt attachments
Proposed lineage name: Q.1
The text was updated successfully, but these errors were encountered:
Looks good, thanks Erik. Will wait for Áine to confirm.
Sorry, something went wrong.
Can confirm the lineage but I don't think B.1.1.74 is the correct parent.
I think this should just be a sublineage of B.1.1
An expanded list of taxa (as of 2021-02-21): B.1.1.X_Nigeria_UK_E484K_P681H_Y144del_nsp6del.taxa.txt
Defining mutations:
ORF1ab: K2511N T2936I A9891V T3284I 11288-11296 SGFdel V6772M spike: T95I 21991-21993 Y144del E484K T23287C P681H D796H C24382T C25276A M: I82T ORF8: 27886-27900del deletes MK at start of ORF8 and frameshift G28209T N: 28896-28900del AR->G
Now designated as B.1.1.318, tagged in release 1.0.7. Thanks @erikalmecdc for flagging the lineage!
aineniamh
No branches or pull requests
New lineage proposal for B.1.1.74 with multiple spike mutations
by Erik Alm
Description
Sub-lineage of: B.1.1.74
Earliest sequence: 2021-01-07
Most recent sequence: 2021-02-07
Countries circulating: Nigeria, UK, USA
Multiple spike mutations and NSP6 deletion commonly seen in VOCs compared to ancestral lineage, already spread to multiple countries.
Spike D614G, Spike D796H, Spike E484K, Spike P681H, Spike T95I, Spike Y144del
NSP6 106-108del
Evidence, see
new lineage.txt
attachments
Proposed lineage name: Q.1
The text was updated successfully, but these errors were encountered: