diff --git a/lineage_notes.txt b/lineage_notes.txt index c98dbe59..ceaadf67 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1094,6 +1094,7 @@ JN.1.15 Alias of B.1.1.529.2.86.1.1.15, S:A688V JN.1.16 Alias of B.1.1.529.2.86.1.1.16, S:F456L, from sars-cov-2-variants/lineage-proposals#1253 JN.1.17 Alias of B.1.1.529.2.86.1.1.17, S:A222V, USA JN.1.18 Alias of B.1.1.529.2.86.1.1.18, S:R346T, directly on JN.1 polytomy, from sars-cov-2-variants/lineage-proposals#1089 +JN.1.18.1 Alias of B.1.1.529.2.86.1.1.18.1, S:T250N JN.1.19 Alias of B.1.1.529.2.86.1.1.19, ORF8:I71V JN.1.20 Alias of B.1.1.529.2.86.1.1.20, S:S31F, directly on JN.1 polytomy JN.1.21 Alias of B.1.1.529.2.86.1.1.21, S:H1058Y, from sars-cov-2-variants/lineage-proposals#1162 diff --git a/lineages.csv b/lineages.csv index 290ecf21..0652518c 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2514209,9 +2514209,6 @@ Wales/CLIMB-CM7Y81X8/2024,JN.1.18 Canada/ON-PHL-202402354/2024,JN.1.18 Canada/ON-PHL-202402355/2024,JN.1.18 Canada/ON-PHL-202401828/2024,JN.1.18 -France/ARA-HCL023205251901/2023,JN.1.18 -Netherlands/ZH-RIVM-137323/2024,JN.1.18 -Luxembourg/LNS1547961/2024,JN.1.18 England/CLIMB-CM7Y87HU/2024,JN.1.18 England/CLIMB-CM7YFO6C/2024,JN.1.18 USA/OH-ODH-SC2024030171/2023,JN.1.18 @@ -2523903,3 +2523900,34 @@ England/CLIMB-CM7YKUZB/2024,JN.1.4.5 England/CLIMB-CM7Y8DGS/2024,JN.1.4.5 England/CLIMB-CM7YREH7/2024,JN.1.4.5 England/CLIMB-CM7YFKXA/2024,JN.1.4.5 +Russia/SPE-RII-MH167117S/2024,JN.1.18.1 +France/ARA-HCL023205251901/2023,JN.1.18.1 +Russia/SPE-RII-MH167236S/2024,JN.1.18.1 +Russia/SPE-RII-MH166822S/2024,JN.1.18.1 +Russia/SPE-RII-MH166801S/2024,JN.1.18.1 +USA/CA-HLX-STM-6C62NMPTA/2024,JN.1.18.1 +Luxembourg/LNS1547961/2024,JN.1.18.1 +Netherlands/ZH-RIVM-137323/2024,JN.1.18.1 +Russia/SPE-RII-MH168035S/2024,JN.1.18.1 +Pakistan/NIH-B168-S6/2024,JN.1.18.1 +Anhui/CZCDC-CX24004/2024,JN.1.18.1 +CHN/CZCDC-2024-CX24004/2024,JN.1.18.1 +Russia/SPE-RII-MH167354S/2024,JN.1.18.1 +Russia/SPE-RII-MH167393S/2024,JN.1.18.1 +USA/HI-H2327738/2024,JN.1.18.1 +USA/HI-H2327728/2024,JN.1.18.1 +USA/HI-H2327689/2024,JN.1.18.1 +USA/HI-H2327690/2024,JN.1.18.1 +CHN/SH-dsyy-2024013001/2024,JN.1.18.1 +Shanghai/SCDC-dsyy-013001/2024,JN.1.18.1 +CHN/HB-Xiangyang-3902/2024,JN.1.18.1 +Shanghai/SCDC-HP02-24/2024,JN.1.18.1 +CHN/SH-HP202402-24/2024,JN.1.18.1 +Hubei/HCDC-XY3902/2024,JN.1.18.1 +Shanghai/SCDC-NCOV-34/2024,JN.1.18.1 +CHN/SH-NCOV24-34/2024,JN.1.18.1 +CHN/SH-NCOV24-045/2024,JN.1.18.1 +Shanghai/SCDC-N-045/2024,JN.1.18.1 +CHN/SH-FX20240205-017/2024,JN.1.18.1 +Shanghai/SCDC-FX0205-017/2024,JN.1.18.1 +Singapore/R14MQ46/2024,JN.1.18.1