diff --git a/lineage_notes.txt b/lineage_notes.txt index 1e34565e..b5d3a9dd 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1194,11 +1194,10 @@ KP.2.19 Alias of B.1.1.529.2.86.1.1.11.1.2.19, S:S31del, ORF1a:V28I, Guatemala, KP.2.20 Alias of B.1.1.529.2.86.1.1.11.1.2.20, ORF1b:D436N, Asia KP.2.20.1 Alias of B.1.1.529.2.86.1.1.11.1.2.20.1, S:T572I, S:K1266R, Australia KP.2.21 Alias of B.1.1.529.2.86.1.1.11.1.2.21, ORF1a:T2121A, S:31del, France -KP.2.22 Alias of B.1.1.529.2.86.1.1.11.1.2.22, S:R346I +KP.2.22 Alias of B.1.1.529.2.86.1.1.11.1.2.26, S:S31del, ORF1a:V3718F KP.2.23 Alias of B.1.1.529.2.86.1.1.11.1.2.23, S:S31del, ORF3a:A110S, ORF8:G77S KP.2.24 Alias of B.1.1.529.2.86.1.1.11.1.2.24, S:S31del, ORF1a:S944L, A10861G KP.2.25 Alias of B.1.1.529.2.86.1.1.11.1.2.25, S:S31del, C9286T, C14919T -KP.2.26 Alias of B.1.1.529.2.86.1.1.11.1.2.26, S:S31del, ORF1a:V3718F KP.3 Alias of B.1.1.529.2.86.1.1.11.1.3, S:Q493E, from sars-cov-2-variants/lineage-proposals#1410 KP.3.1 Alias of B.1.1.529.2.86.1.1.11.1.3.1, G15372T, A19722G KP.3.1.1 Alias of B.1.1.529.2.86.1.1.11.1.3.1.1, ORF1a:S4286C, C12616T, S:S31del, Spain, from sars-cov-2-variants/lineage-proposals#1563 @@ -1261,6 +1260,7 @@ KP.4.2.1 Alias of B.1.1.529.2.86.1.1.11.1.4.2.1, S:S31F KP.4.2.2 Alias of B.1.1.529.2.86.1.1.11.1.4.2.2, S:F59I KP.4.2.3 Alias of B.1.1.529.2.86.1.1.11.1.4.2.3, S:G35R, ORF1a:G519S, ORF1a:I2227V KP.5 Alias of B.1.1.529.2.86.1.1.11.1.5, S:T572I, from sars-cov-2-variants/lineage-proposals#1097 +KP.6 Alias of B.1.1.529.2.86.1.1.11.1.6, S:R346I JN.1.12 Alias of B.1.1.529.2.86.1.1.12, S:F456V, ORF7a:A8T, from sars-cov-2-variants/lineage-proposals#1253 JN.1.13 Alias of B.1.1.529.2.86.1.1.13, S:A1087S, after C26894T, C25680T, USA, from #2464 JN.1.13.1 Alias of B.1.1.529.2.86.1.1.13.1, S:R346T, S:F59S, USA, from sars-cov-2-variants/lineage-proposals/issues/1386 diff --git a/lineages.csv b/lineages.csv index ccf971ed..e96c520d 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2568781,28 +2568781,28 @@ USA/NY-GBW-GKPLAAAA39174/2024,XEF USA/NY-GBW-GKISBBBB77128/2024,XEF Australia/WA16287/2024,XEF USA/UT-UPHL-240715105149/2024,XEF -Thailand/NIC_CRI_FRS260/2024,KP.2.22 -USA/CO-CDPHE-41969110/2024,KP.2.22 -Nepal/NPHL-S-2632/2024,KP.2.22 -Canada/AB-ABPHL-116174/2024,KP.2.22 -Pakistan/NIH-B169-S27/2024,KP.2.22 -England/CLIMB-CM7YG4GE/2024,KP.2.22 -France/OCC-RELAB-HCL724000143301/2024,KP.2.22 -England/CLIMB-CM7YJXWJ/2024,KP.2.22 -England/CLIMB-CM7YG7Y9/2024,KP.2.22 -Bangladesh/SIRS_ideSHi_1240210002/2024,KP.2.22 -Ireland/LK-UHL-684220/2024,KP.2.22 -Ireland/LK-UHL-684124/2024,KP.2.22 -Ireland/LK-UHL-684025/2024,KP.2.22 -Ireland/LK-UHL-683983/2024,KP.2.22 -Australia/NSW-ICPMR-54535/2024,KP.2.22 -Australia/QLD0x014665/2024,KP.2.22 -USA/CA-CDPH-6000019895/2024,KP.2.22 -Ukraine/86285/2024,KP.2.22 -France/ARA-CHUGA-4056380848/2024,KP.2.22 -Sweden/01_SE100_24CS100477/2024,KP.2.22 -Sweden/AB-01_SE100_24CS500627/2024,KP.2.22 -Sweden/AB-01_SE100_24CS500629/2024,KP.2.22 +Thailand/NIC_CRI_FRS260/2024,KP.6 +USA/CO-CDPHE-41969110/2024,KP.6 +Nepal/NPHL-S-2632/2024,KP.6 +Canada/AB-ABPHL-116174/2024,KP.6 +Pakistan/NIH-B169-S27/2024,KP.6 +England/CLIMB-CM7YG4GE/2024,KP.6 +France/OCC-RELAB-HCL724000143301/2024,KP.6 +England/CLIMB-CM7YJXWJ/2024,KP.6 +England/CLIMB-CM7YG7Y9/2024,KP.6 +Bangladesh/SIRS_ideSHi_1240210002/2024,KP.6 +Ireland/LK-UHL-684220/2024,KP.6 +Ireland/LK-UHL-684124/2024,KP.6 +Ireland/LK-UHL-684025/2024,KP.6 +Ireland/LK-UHL-683983/2024,KP.6 +Australia/NSW-ICPMR-54535/2024,KP.6 +Australia/QLD0x014665/2024,KP.6 +USA/CA-CDPH-6000019895/2024,KP.6 +Ukraine/86285/2024,KP.6 +France/ARA-CHUGA-4056380848/2024,KP.6 +Sweden/01_SE100_24CS100477/2024,KP.6 +Sweden/AB-01_SE100_24CS500627/2024,KP.6 +Sweden/AB-01_SE100_24CS500629/2024,KP.6 Australia/QLD0x014881/2024,KP.2.24 USA/NJ-GBW-GKPLAAAA12046/2024,KP.2.24 Canada/AB-ABPHL-120929/2024,KP.2.24 @@ -2568891,16 +2568891,16 @@ USA/OH-ODH-SC4031919/2024,KP.2.25 USA/OH-ODH-SC4031922/2024,KP.2.25 USA/OH-ODH-SC4031960/2024,KP.2.25 USA/OH-ODH-SC4032140/2024,KP.2.25 -Taiwan/CDC-F93885/2024,KP.2.26 -Australia/WA16206/2024,KP.2.26 -Japan/FR001-0164/2024,KP.2.26 -Taiwan/CDC-F93926/2024,KP.2.26 -Taiwan/CDC-F93382/2024,KP.2.26 -Taiwan/CDC-F93289/2024,KP.2.26 -USA/CA-GBW-GKISBBBB36125/2024,KP.2.26 -USA/CA-GBW-GKPLAAAA19564/2024,KP.2.26 -USA/WA-GBW-GKISBBBC08874/2024,KP.2.26 -USA/CA-GBW-GKISBBBD35113/2024,KP.2.26 +Taiwan/CDC-F93885/2024,KP.2.22 +Australia/WA16206/2024,KP.2.22 +Japan/FR001-0164/2024,KP.2.22 +Taiwan/CDC-F93926/2024,KP.2.22 +Taiwan/CDC-F93382/2024,KP.2.22 +Taiwan/CDC-F93289/2024,KP.2.22 +USA/CA-GBW-GKISBBBB36125/2024,KP.2.22 +USA/CA-GBW-GKPLAAAA19564/2024,KP.2.22 +USA/WA-GBW-GKISBBBC08874/2024,KP.2.22 +USA/CA-GBW-GKISBBBD35113/2024,KP.2.22 USA/VA-GBW-GKISBBBC92787/2024,KR.4.1 USA/VA-GBW-GKISBBBC14689/2024,KR.4.1 USA/VA-GBW-GKPLAAAA21099/2024,KR.4.1