From 1eeb05e14b22ef936862bd897f658b87bb6f1cb4 Mon Sep 17 00:00:00 2001 From: InfrPopGen Date: Tue, 15 Nov 2022 14:59:39 +0000 Subject: [PATCH] Added new lineage BA.5.1.31 from #991 with 31 new sequence designations, and 1 updated designations from BA.5.1 --- lineage_notes.txt | 1 + lineages.csv | 34 ++++++++++++++++++++++++++++++++-- 2 files changed, 33 insertions(+), 2 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index d98cd218..3a1adeba 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -956,6 +956,7 @@ BA.5.1.28 Alias of B.1.1.529.5.1.28, mainly found in North America, defined by S BA.5.1.29 Alias of B.1.1.529.5.1.29, mainly found in Russia, Germany and Estonia, from pango-designation issue #1060 CL.1 Alias of B.1.1.529.5.1.29.1, S:150E and S:460K, issue #1187 BA.5.1.30 Alias of B.1.1.529.5.1.30, ORF6:D6G +BA.5.1.31 Alias of B.1.1.529.5.1.31, found mainly in France and Denmark, from pango-designation issue #991 BA.5.2 Alias of B.1.1.529.5.2, mainly found in South Africa, England and USA, from pango-designation issue #551 BA.5.2.1 Alias of B.1.1.529.5.2.1, mainly found in South Africa, England and USA, from pango-designation issue #657 BF.1 Alias of B.1.1.529.5.2.1.1, mainly found in England, Denmark, Spain and Scotland, from pango-designation issue #618 diff --git a/lineages.csv b/lineages.csv index d6dfa1df..40b9689e 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2012834,7 +2012834,7 @@ Finland/THL-202216211/2022,BA.5.1 Germany/NW-RKI-I-893807/2022,BA.5.1 England/LSPA-3E900A4/2022,BA.5.1 Germany/BW-RKI-I-952589/2022,BA.5.1 -Israel/ICH-741180450/2022,BA.5.1 +Israel/ICH-741180450/2022,BA.5.1.31 England/LSPA-3F376D9/2022,BA.5.1 Canada/ON-KHS-22-09700-v1/2022,BA.5.1 Germany/BW-RKI-I-916714/2022,BA.5.1 @@ -2124904,4 +2124904,34 @@ Sweden/1592188863/2022,BA.5.2.41 Sweden/9554510576/2022,BA.5.2.41 Sweden/1592187663/2022,BA.5.2.41 Sweden/1592031963/2022,BA.5.2.41 - +France/ARA-CHUGA-2091187441/2022,BA.5.1.31 +France/ARA-GENBIO-19299154780/2022,BA.5.1.31 +Denmark/DCGC-599683/2022,BA.5.1.31 +Denmark/DCGC-561996/2022,BA.5.1.31 +Denmark/DCGC-585063/2022,BA.5.1.31 +France/ARA-HMN-22082040326/2022,BA.5.1.31 +Spain/AS-252272645/2022,BA.5.1.31 +France/ARA-LBZCentre-041912060108/2022,BA.5.1.31 +France/ARA-HCL022131998301/2022,BA.5.1.31 +France/OCC-GENBIO-U08CV1920172/2022,BA.5.1.31 +France/CVL-LBZCentre-1240368806/2022,BA.5.1.31 +Denmark/DCGC-599108/2022,BA.5.1.31 +Belgium/ULG-28107/2022,BA.5.1.31 +France/GES-IPP48198/2022,BA.5.1.31 +Canada/NB-CHUDGLD-181022-MM00454R/2022,BA.5.1.31 +Israel/SMC-7100037/2022,BA.5.1.31 +France/HDF-IPP46167/2022,BA.5.1.31 +France/ARA-ALPIGENE-2208030109/2022,BA.5.1.31 +Germany/NW-RKI-I-1013854/2022,BA.5.1.31 +France/GES-HMN-22082120460/2022,BA.5.1.31 +Denmark/DCGC-586163/2022,BA.5.1.31 +France/ARA-GENBIO-14292341099/2022,BA.5.1.31 +France/IDF-IPP48051/2022,BA.5.1.31 +Denmark/DCGC-584681/2022,BA.5.1.31 +France/HDF-IPP46413/2022,BA.5.1.31 +France/IDF-IPP48087/2022,BA.5.1.31 +France/PAC-cerba-22Q0685758/2022,BA.5.1.31 +Israel/SMC-7094590/2022,BA.5.1.31 +Denmark/DCGC-586295/2022,BA.5.1.31 +Denmark/DCGC-567008/2022,BA.5.1.31 +Belgium/UZA-UA-CV8223640596/2022,BA.5.1.31