From 55ac27dbf99bb4e29b92e449f43ac8e5054a6f52 Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Sun, 23 Jul 2023 15:49:59 +0200 Subject: [PATCH] Designate HK.1 (EG.5.1.1.1, S:G257V, China) with 30 seqs --- lineage_notes.txt | 1 + lineages.csv | 32 ++++++++++++++++++++++++++++++++ pango_designation/alias_key.json | 1 + 3 files changed, 34 insertions(+) diff --git a/lineage_notes.txt b/lineage_notes.txt index ffce2d97..4bfe5a74 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2896,6 +2896,7 @@ EG.4.3 Alias of XBB.1.9.2.4.3, S:Q613H EG.5 Alias of XBB.1.9.2.5, S:F456L (T22930A), ORF1a:A690V, ORF1a:A3143V, Indonesia From #1918 EG.5.1 Alias of XBB.1.9.2.5.1, S:Q52H EG.5.1.1 Alias of XBB.1.9.2.5.1.1, China, from pango-designation issue #2020 +HK.1 Alias of XBB.1.9.2.5.1.1.1, S:G257V, China EG.5.1.2 Alias of XBB.1.9.2.5.1.2, Japan, ORF1b:V1644I EG.5.1.3 Alias of XBB.1.9.2.5.1.3, ORF1a:R542C, C22570T EG.5.1.4 Alias of XBB.1.9.2.5.1.4, ORF1b:K2557R diff --git a/lineages.csv b/lineages.csv index 0a060124..3a5e0c33 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2447699,3 +2447699,35 @@ USA/CA-CDPH-A3000000297958/2023,EG.5.1.5 Portugal/PT48721/2023,EG.5.1.5 Portugal/PT48433/2023,EG.5.1.5 Portugal/PT48640/2023,EG.5.1.5 +Xinjiang/XJCDCWLMQ-236/2023,HK.1 +Xinjiang/XJCDCYL23066/2023,HK.1 +CHN/BTCDC184/2023,HK.1 +CHN/XJCDCTC-085/2023,HK.1 +Shanghai/SCDC-XG06-9219/2023,HK.1 +CHN/XJCDCWLMQ-319/2023,HK.1 +CHN/XJCDCWLMQ-331/2023,HK.1 +CHN/XJCDCAKS-105/2023,HK.1 +Xinjiang/XJCDCALT-090/2023,HK.1 +Xinjiang/XJCDCWLMQ-343/2023,HK.1 +Xinjiang/XJCDCBOZ-58/2023,HK.1 +Xinjiang/XJCDCCJ-166/2023,HK.1 +Xinjiang/XJCDCWLMQ-348/2023,HK.1 +Xinjiang/XJCDCKZ87/2023,HK.1 +Xinjiang/XJCDCTLF-53/2023,HK.1 +Xinjiang/XJCDCBOZ-66/2023,HK.1 +Xinjiang/XJCDCYL-76/2023,HK.1 +Xinjiang/XJCDCKS-127/2023,HK.1 +CHN/XJCDCAKS-109/2023,HK.1 +CHN/HLJCDC-1551/2023,HK.1 +CHN/XJCDCALT-074/2023,HK.1 +CHN/BTCDC182/2023,HK.1 +Xinjiang/XJCDCHT052/2023,HK.1 +Xinjiang/XJCDCHM-145/2023,HK.1 +CHN/BTCDC175/2023,HK.1 +Xinjiang/XJCDCWLMQ-264/2023,HK.1 +Gansu/BYCDC105/2023,HK.1 +CHN/BYCDC2023105/2023,HK.1 +CHN/HB-Wuhan-2090/2023,HK.1 +Hubei/HCDC-WH2090/2023,HK.1 +Xinjiang/XJCDCAKS-094/2023,HK.1 +CHN/XJCDCKS-140/2023,HK.1 diff --git a/pango_designation/alias_key.json b/pango_designation/alias_key.json index c2c09328..0994a614 100644 --- a/pango_designation/alias_key.json +++ b/pango_designation/alias_key.json @@ -186,6 +186,7 @@ "HG": "XBB.2.3.8", "HH": "XBB.2.3.2", "HJ": "XBB.1.5.1", + "HK": "XBB.1.9.2.5.1.1", "XA": ["B.1.1.7","B.1.177"], "XB": ["B.1.634","B.1.631"], "XC": ["AY.29","B.1.1.7"],