diff --git a/lineage_notes.txt b/lineage_notes.txt index 58e63b6e..2e3cf1e8 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -3789,6 +3789,7 @@ XDM Recombinant lineage of XDA, GW.5, XDA (breakpoints between 22107-22926 and 2 XDN Recombinant lineage of JN.1.1 and JD.1 (breakpoint between 24379 and 24989), from #2448 XDP Recombinant lineage of JN.1.4 and FL.15 (breakpoint between 26834 and 27809), from #2451 XDQ Recombinant lineage of BA.2.86.1 and FL.15.1.1 (breakpoint between 223605 and 24377), from #2481 +XDR Recombinant lineage of JD.1.1.1 and JN.1.1 (breakpoint between 11043 and 11726), Brazil, from #2477 *A.2.1 Withdrawn: Lineage with sequences predominantly from Panama *A.8 Withdrawn: Indian lineage merged with A.9 *A.10 Withdrawn: Spanish lineage reassigned to A.5 diff --git a/lineages.csv b/lineages.csv index 615df4f3..88c1c6a1 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2517630,3 +2517630,26 @@ Brazil/PA-IEC-043389/2023,GK.1.10.1 Brazil/PA-000535-IEC/2023,GK.1.10.1 Brazil/PA-000551-IEC/2023,GK.1.10.1 Brazil/PA-000526-IEC/2023,GK.1.10.1 +Brazil/RS-FIOCRUZ-13873/2023,XDR +Denmark/DCGC-668750/2023,XDR +Brazil/RN-FIOCRUZ-151/2024,XDR +Brazil/RN-FIOCRUZ-14407/2023,XDR +Brazil/RS-FIOCRUZ-13872/2023,XDR +Brazil/SE-FIOCRUZ-13719/2023,XDR +Brazil/PB-000182-IEC/2023,XDR +USA/NY-GBW-H20-332-7990/2024,XDR +Brazil/CE-LACENCE-232298467/2023,XDR +Brazil/RN-FIOCRUZ-148/2024,XDR +Brazil/RN-FIOCRUZ-146/2024,XDR +Brazil/PB-000197-IEC/2023,XDR +Brazil/PB-000175-IEC/2023,XDR +Brazil/RS-GAIHN-BRA-02-0239-F/2023,XDR +Brazil/ES-LACENES-321480691/2023,XDR +Brazil/PB-046312-IEC/2023,XDR +Canada/ON-PHL-202402804/2024,XDR +Brazil/AL-FIOCRUZ-13749/2023,XDR +Brazil/AL-FIOCRUZ-13627/2023,XDR +Brazil/AL-FIOCRUZ-13535/2023,XDR +Spain/CB-HUMV-293014/2023,XDR +Spain/PV-HUD-96113155/2023,XDR +Spain/PV-HUD-98798778/2024,XDR diff --git a/pango_designation/alias_key.json b/pango_designation/alias_key.json index bdeaf033..d294a5be 100644 --- a/pango_designation/alias_key.json +++ b/pango_designation/alias_key.json @@ -341,6 +341,7 @@ "XDM": ["XDA","GW.5","XDA"], "XDN": ["JN.1.1","JD.1*"], "XDP": ["JN.1.4","FL.15"], - "XDQ": ["BA.2.86.1","FL.15.1.1"] + "XDQ": ["BA.2.86.1","FL.15.1.1"], + "XDR": ["JD.1.1.1","JN.1.1"] }