From 1e6f99674ddf77d4dc9e565c055808c5a38cf18c Mon Sep 17 00:00:00 2001 From: Cornelius Roemer Date: Fri, 12 Jul 2024 12:41:08 +0200 Subject: [PATCH] Designate KP.3.3.3 (G9424T, Japan/Canada), ML.1 (S:681H), ML.2 (S:Q677H) --- lineage_notes.txt | 3 + lineages.csv | 759 +++++++++++++++++++++++++++++-- pango_designation/alias_key.json | 1 + 3 files changed, 734 insertions(+), 29 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 288867e6..5e766680 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -1191,6 +1191,9 @@ KP.3.2.5 Alias of B.1.1.529.2.86.1.1.11.1.3.2.5, S:V62F KP.3.3 Alias of B.1.1.529.2.86.1.1.11.1.3.3, N:R204P KP.3.3.1 Alias of B.1.1.529.2.86.1.1.11.1.3.3.1, S:T547K, ORF3a:F87S KP.3.3.2 Alias of B.1.1.529.2.86.1.1.11.1.3.3.2, S:A435S, ORF1a:N4134T, England/Canada +KP.3.3.3 Alias of B.1.1.529.2.86.1.1.11.1.3.3.3, G9424T, Japan/Canada +ML.1 Alias of B.1.1.529.2.86.1.1.11.1.3.3.3.1, S:681H +ML.2 Alias of B.1.1.529.2.86.1.1.11.1.3.3.3.2, KP.3.4 Alias of B.1.1.529.2.86.1.1.11.1.3.4, ORF3a:L73F, C25521T, Asia KP.3.4.1 Alias of B.1.1.529.2.86.1.1.11.1.3.4.1, S:S31F, N:A134V, ORF1a:E1192K KP.4 Alias of B.1.1.529.2.86.1.1.11.1.4, C6070T, India diff --git a/lineages.csv b/lineages.csv index 9a5437a3..a87cecf4 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2544928,35 +2544928,6 @@ Australia/QLD0x0143C9/2024,KP.3.3 Australia/SA1439631/2024,KP.3.3 Australia/SA1450904/2024,KP.3.3 Australia/SA1439637/2024,KP.3.3 -Japan/FR302-0052/2024,KP.3.3 -Japan/FR014-0068/2024,KP.3.3 -Japan/FR088-0022/2024,KP.3.3 -Japan/SUPCRC-6331/2024,KP.3.3 -Japan/FR047-0004/2024,KP.3.3 -Japan/FR004-0053/2024,KP.3.3 -Japan/TKYnat16916/2024,KP.3.3 -Japan/TKYnat16782/2024,KP.3.3 -Japan/FR050-0074/2024,KP.3.3 -USA/HI-H2328530/2024,KP.3.3 -USA/HI-H2328537/2024,KP.3.3 -Japan/FR062-0105/2024,KP.3.3 -Japan/FR035-0032/2024,KP.3.3 -Japan/FR079-0040/2024,KP.3.3 -Japan/FR001-0024/2024,KP.3.3 -Japan/FR014-0104/2024,KP.3.3 -Japan/FR302-0487/2024,KP.3.3 -Japan/FR302-0462/2024,KP.3.3 -Japan/FR021-0321/2024,KP.3.3 -Japan/FR041-0032/2024,KP.3.3 -Japan/FR014-0078/2024,KP.3.3 -Japan/FR079-0026/2024,KP.3.3 -Japan/FR079-0030/2024,KP.3.3 -Japan/FR012-0074/2024,KP.3.3 -Japan/FR021-0317/2024,KP.3.3 -Japan/FR021-0308/2024,KP.3.3 -Japan/SUPCRC-6338/2024,KP.3.3 -Japan/SUPCRC-6359/2024,KP.3.3 -Japan/SUPCRC-6355/2024,KP.3.3 Japan/PG-596515/2024,JN.15 Japan/FR301-0230/2024,JN.15 Japan/FR044-0003/2024,JN.15 @@ -2562755,3 +2562726,733 @@ England/CLIMB-CM7YFG3F/2024,KP.3.4.1 England/CLIMB-CM7Y8Z9R/2024,KP.3.4.1 Australia/NSW-ICPMR-54177/2024,KP.3.4.1 Australia/QLD0x014520/2024,KP.3.4.1 +Japan/FR027-0048/2024,KP.3.3.3 +Japan/TKYnat17148/2024,KP.3.3.3 +Japan/TKYnat17146/2024,KP.3.3.3 +Japan/FR088-0128/2024,KP.3.3.3 +Japan/FR018-0054/2024,KP.3.3.3 +Japan/FR064-0038/2024,KP.3.3.3 +Japan/FR016-0109/2024,KP.3.3.3 +Japan/FR066-0058/2024,KP.3.3.3 +Japan/FR021-0506/2024,KP.3.3.3 +USA/CA-GBW-GKISBBBC88689/2024,KP.3.3.3 +Japan/FR011-0341/2024,KP.3.3.3 +USA/HI-H2329131/2024,KP.3.3.3 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b/pango_designation/alias_key.json @@ -279,6 +279,7 @@ "MH": "B.1.1.529.2.86.1.1.9.2.1.3.2", "MJ": "B.1.1.529.2.86.1.1.29.1", "MK": "B.1.1.529.2.86.1.1.11.1.3.1.6", + "ML": "B.1.1.529.2.86.1.1.11.1.3.3.3", "XA": ["B.1.1.7","B.1.177"], "XB": ["B.1.634","B.1.631"], "XC": ["AY.29","B.1.1.7"],