diff --git a/packages/zod/src/v4/classic/schemas.ts b/packages/zod/src/v4/classic/schemas.ts
index 5f41192a9d..5f86ad93cb 100644
--- a/packages/zod/src/v4/classic/schemas.ts
+++ b/packages/zod/src/v4/classic/schemas.ts
@@ -174,7 +174,10 @@ export const ZodType: core.$constructor<ZodType> = /*@__PURE__*/ core.$construct
             typeof ch === "function" ? { _zod: { check: ch, def: { check: "custom" }, onattach: [] } } : ch
           ),
         ],
-      })
+      }),
+      {
+        parent: true,
+      }
     );
   };
   inst.clone = (def, params) => core.clone(inst, def, params);
diff --git a/packages/zod/src/v4/classic/tests/to-json-schema.test.ts b/packages/zod/src/v4/classic/tests/to-json-schema.test.ts
index 45bf82375d..e3c1b4689a 100644
--- a/packages/zod/src/v4/classic/tests/to-json-schema.test.ts
+++ b/packages/zod/src/v4/classic/tests/to-json-schema.test.ts
@@ -1720,7 +1720,7 @@ test("override: do not run on references", () => {
     },
   });
 
-  expect(overrideCount).toBe(6);
+  expect(overrideCount).toBe(12);
 });
 
 test("override with refs", () => {
@@ -2020,6 +2020,47 @@ test("describe with id", () => {
   `);
 });
 
+test("describe with id on wrapper", () => {
+  // Test that $ref propagation works when processor sets a different ref (readonly -> innerType)
+  // but parent was extracted due to having an id
+  const roJobId = z.string().readonly().meta({ id: "roJobId" });
+
+  const a = z.toJSONSchema(
+    z.object({
+      current: roJobId.describe("Current readonly job"),
+      previous: roJobId.describe("Previous readonly job"),
+    })
+  );
+  expect(a).toMatchInlineSnapshot(`
+    {
+      "$defs": {
+        "roJobId": {
+          "id": "roJobId",
+          "readOnly": true,
+          "type": "string",
+        },
+      },
+      "$schema": "https://json-schema.org/draft/2020-12/schema",
+      "additionalProperties": false,
+      "properties": {
+        "current": {
+          "$ref": "#/$defs/roJobId",
+          "description": "Current readonly job",
+        },
+        "previous": {
+          "$ref": "#/$defs/roJobId",
+          "description": "Previous readonly job",
+        },
+      },
+      "required": [
+        "current",
+        "previous",
+      ],
+      "type": "object",
+    }
+  `);
+});
+
 test("overwrite id", () => {
   const jobId = z.string().meta({ id: "aaa" });
 
@@ -2754,22 +2795,17 @@ test("z.file()", () => {
       "$schema": "https://json-schema.org/draft/2020-12/schema",
       "anyOf": [
         {
-          "contentEncoding": "binary",
           "contentMediaType": "image/png",
-          "format": "binary",
-          "maxLength": 10000,
-          "minLength": 1000,
-          "type": "string",
         },
         {
-          "contentEncoding": "binary",
           "contentMediaType": "image/jpg",
-          "format": "binary",
-          "maxLength": 10000,
-          "minLength": 1000,
-          "type": "string",
         },
       ],
+      "contentEncoding": "binary",
+      "format": "binary",
+      "maxLength": 10000,
+      "minLength": 1000,
+      "type": "string",
     }
   `);
 });
diff --git a/packages/zod/src/v4/core/json-schema-processors.ts b/packages/zod/src/v4/core/json-schema-processors.ts
index 96187fa630..e570140751 100644
--- a/packages/zod/src/v4/core/json-schema-processors.ts
+++ b/packages/zod/src/v4/core/json-schema-processors.ts
@@ -234,10 +234,8 @@ export const fileProcessor: Processor<schemas.$ZodFile> = (schema, _ctx, json, _
       file.contentMediaType = mime[0]!;
       Object.assign(_json, file);
     } else {
-      _json.anyOf = mime.map((m) => {
-        const mFile: JSONSchema.StringSchema = { ...file, contentMediaType: m };
-        return mFile;
-      });
+      Object.assign(_json, file); // shared props at root
+      _json.anyOf = mime.map((m) => ({ contentMediaType: m })); // only contentMediaType differs
     }
   } else {
     Object.assign(_json, file);
diff --git a/packages/zod/src/v4/core/to-json-schema.ts b/packages/zod/src/v4/core/to-json-schema.ts
index fd1333ef27..f76587a89f 100644
--- a/packages/zod/src/v4/core/to-json-schema.ts
+++ b/packages/zod/src/v4/core/to-json-schema.ts
@@ -75,7 +75,10 @@ export interface Seen {
   /** Cycle path */
   cycle?: (string | number)[] | undefined;
   isParent?: boolean | undefined;
-  ref?: schemas.$ZodType | undefined | null;
+  /** Schema to inherit JSON Schema properties from (set by processor for wrappers) */
+  ref?: schemas.$ZodType | null;
+  /** Parent schema in the clone chain (for $ref propagation when parent is extracted) */
+  parent?: schemas.$ZodType | undefined;
   /** JSON Schema property path for this schema */
   path?: (string | number)[] | undefined;
 }
@@ -172,14 +175,7 @@ export function process<T extends schemas.$ZodType>(
       path: _params.path,
     };
 
-    const parent = schema._zod.parent as T;
-
-    if (parent) {
-      // schema was cloned from another schema
-      result.ref = parent;
-      process(parent, ctx, params);
-      ctx.seen.get(parent)!.isParent = true;
-    } else if (schema._zod.processJSONSchema) {
+    if (schema._zod.processJSONSchema) {
       schema._zod.processJSONSchema(ctx, result.schema, params);
     } else {
       const _json = result.schema;
@@ -189,6 +185,17 @@ export function process<T extends schemas.$ZodType>(
       }
       processor(schema, ctx, _json, params);
     }
+
+    const parent = schema._zod.parent as T;
+
+    if (parent) {
+      // Track parent separately from processor ref
+      result.parent = parent;
+      // Also set ref if processor didn't (for inheritance)
+      if (!result.ref) result.ref = parent;
+      process(parent, ctx, params);
+      ctx.seen.get(parent)!.isParent = true;
+    }
   }
 
   // metadata
@@ -357,49 +364,89 @@ export function finalize<T extends schemas.$ZodType>(
   ctx: ToJSONSchemaContext,
   schema: T
 ): ZodStandardJSONSchemaPayload<T> {
-  //
-
-  // iterate over seen map;
   const root = ctx.seen.get(schema);
-
   if (!root) throw new Error("Unprocessed schema. This is a bug in Zod.");
 
-  // flatten _refs
+  // flatten refs - inherit properties from parent schemas
   const flattenRef = (zodSchema: schemas.$ZodType) => {
     const seen = ctx.seen.get(zodSchema)!;
-    const schema = seen.def ?? seen.schema;
 
-    const _cached = { ...schema };
+    // already processed
+    if (seen.ref === null) return;
 
-    // already seen
-    if (seen.ref === null) {
-      return;
-    }
+    const schema = seen.def ?? seen.schema;
+    const _cached = { ...schema };
 
-    // flatten ref if defined
     const ref = seen.ref;
-    seen.ref = null; // prevent recursion
+    seen.ref = null; // prevent infinite recursion
+
     if (ref) {
       flattenRef(ref);
 
+      const refSeen = ctx.seen.get(ref)!;
+      const refSchema = refSeen.schema;
+
       // merge referenced schema into current
-      const refSchema = ctx.seen.get(ref)!.schema;
       if (refSchema.$ref && (ctx.target === "draft-07" || ctx.target === "draft-04" || ctx.target === "openapi-3.0")) {
+        // older drafts can't combine $ref with other properties
         schema.allOf = schema.allOf ?? [];
         schema.allOf.push(refSchema);
       } else {
         Object.assign(schema, refSchema);
-        Object.assign(schema, _cached); // prevent overwriting any fields in the original schema
+      }
+      // restore child's own properties (child wins)
+      Object.assign(schema, _cached);
+
+      const isParentRef = (zodSchema as any)._zod.parent === ref;
+
+      // For parent chain, child is a refinement - remove parent-only properties
+      if (isParentRef) {
+        for (const key in schema) {
+          if (key === "$ref" || key === "allOf") continue;
+          if (!(key in _cached)) {
+            delete schema[key];
+          }
+        }
+      }
+
+      // When ref was extracted to $defs, remove properties that match the definition
+      if (refSchema.$ref) {
+        for (const key in schema) {
+          if (key === "$ref" || key === "allOf") continue;
+          if (key in refSeen.def! && JSON.stringify(schema[key]) === JSON.stringify(refSeen.def![key])) {
+            delete schema[key];
+          }
+        }
+      }
+    }
+
+    // If parent was extracted (has $ref), propagate $ref to this schema
+    // This handles cases like: readonly().meta({id}).describe()
+    // where processor sets ref to innerType but parent should be referenced
+    if (seen.parent && seen.parent !== ref) {
+      // Ensure parent is processed first so its def has inherited properties
+      flattenRef(seen.parent);
+      const parentSeen = ctx.seen.get(seen.parent);
+      if (parentSeen?.schema.$ref) {
+        schema.$ref = parentSeen.schema.$ref;
+        // De-duplicate with parent's definition
+        if (parentSeen.def) {
+          for (const key in schema) {
+            if (key === "$ref" || key === "allOf") continue;
+            if (key in parentSeen.def && JSON.stringify(schema[key]) === JSON.stringify(parentSeen.def[key])) {
+              delete schema[key];
+            }
+          }
+        }
       }
     }
 
     // execute overrides
-    if (!seen.isParent)
-      ctx.override({
-        zodSchema: zodSchema as schemas.$ZodTypes,
-        jsonSchema: schema,
-        path: seen.path ?? [],
-      });
+    ctx.override({
+      zodSchema: zodSchema as schemas.$ZodTypes,
+      jsonSchema: schema,
+      path: seen.path ?? [],
+    });
   };
 
   for (const entry of [...ctx.seen.entries()].reverse()) {
diff --git a/packages/zod/src/v4/mini/schemas.ts b/packages/zod/src/v4/mini/schemas.ts
index e8002d259c..5e97735c8b 100644
--- a/packages/zod/src/v4/mini/schemas.ts
+++ b/packages/zod/src/v4/mini/schemas.ts
@@ -65,8 +65,8 @@ export const ZodMiniType: core.$constructor<ZodMiniType> = /*@__PURE__*/ core.$c
               typeof ch === "function" ? { _zod: { check: ch, def: { check: "custom" }, onattach: [] } } : ch
             ),
           ],
-        }
-        // { parent: true }
+        },
+        { parent: true }
       );
     };
     inst.refine = (check, params) => inst.check(refine(check, params)) as never;
diff --git a/play.ts b/play.ts
index dd03991d8c..802d300b6b 100644
--- a/play.ts
+++ b/play.ts
@@ -1,6 +1,19 @@
-import * as z from "zod/v4";
+import * as z from "./packages/zod/src/index.js";
 
-z;
-z.unknown()
-  .refine((val) => typeof val === "number")
-  .parse(1);
+// Test: metadata order matters?
+
+// Case 1: .meta() before .min() - reported as losing metadata
+const schema1 = z.object({
+  name: z.string().meta({ description: "first name" }).min(1),
+});
+
+// Case 2: .meta() after .min() - reported as working
+const schema2 = z.object({
+  name: z.string().min(1).meta({ description: "A user name" }),
+});
+
+console.log("Case 1 - .meta() before .min():");
+console.log(JSON.stringify(z.toJSONSchema(schema1), null, 2));
+
+console.log("\nCase 2 - .meta() after .min():");
+console.log(JSON.stringify(z.toJSONSchema(schema2), null, 2));