From ee73d73a8b71a7a3f7a376fb6be72cb08e04c1f5 Mon Sep 17 00:00:00 2001 From: Cristian Garcia Date: Thu, 16 Mar 2023 19:03:11 +0000 Subject: [PATCH 1/3] fix test_loop --- ciclo/loops/common.py | 2 ++ 1 file changed, 2 insertions(+) diff --git a/ciclo/loops/common.py b/ciclo/loops/common.py index bb2a98b..a849270 100644 --- a/ciclo/loops/common.py +++ b/ciclo/loops/common.py @@ -194,6 +194,8 @@ def test_loop( if tasks is None: tasks = {} + # create a copy of tasks to avoid modifying the original + tasks = tasks.copy() additionl_tasks: Dict[ScheduleLike, CallbackOrList] = {} named_tasks: Dict[str, CallbackOrList] = {} for schedule in list(tasks.keys()): From ff7bb21791a5d8199db6f3cb653dce8326d2f90f Mon Sep 17 00:00:00 2001 From: Cristian Garcia Date: Thu, 16 Mar 2023 19:03:22 +0000 Subject: [PATCH 2/3] relax python version --- poetry.lock | 1377 ++++++++++++++++++------------------------------ pyproject.toml | 2 +- 2 files changed, 511 insertions(+), 868 deletions(-) diff --git a/poetry.lock b/poetry.lock index fca283d..c8f7bc9 100644 --- a/poetry.lock +++ b/poetry.lock @@ -316,100 +316,87 @@ files = [ [[package]] name = "charset-normalizer" -version = "3.0.1" +version = "3.1.0" description = "The Real First Universal Charset Detector. 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"sha256:d4a3397aed2790d5fa8adc5336e3607813dc498a49b1a0a48297f78d89a71b0b"}, - {file = "wandb-0.13.10.tar.gz", hash = "sha256:a2cde45dd6390ed1923ef3e1eca26487cb1e02e4732515856933c4494a975ad3"}, + {file = "wandb-0.14.0-py3-none-any.whl", hash = "sha256:3e9c1194627e59f6f210f8030fb73f51677e6b908fc4b7c59395f230e5076502"}, + {file = "wandb-0.14.0.tar.gz", hash = "sha256:2f17b570ca26619ca35bd4ea9628961aae1d91cad56cf26becb917854ea055d3"}, ] [package.dependencies] appdirs = ">=1.4.3" Click = ">=7.0,<8.0.0 || >8.0.0" docker-pycreds = ">=0.4.0" -GitPython = ">=1.0.0" +GitPython = ">=1.0.0,<3.1.29 || >3.1.29" pathtools = "*" protobuf = [ {version = ">=3.12.0,<4.21.0 || >4.21.0,<5", markers = "python_version < \"3.9\" and sys_platform == \"linux\""}, @@ -4093,7 +3736,7 @@ azure = ["azure-storage-blob"] gcp = ["google-cloud-storage"] grpc = ["grpcio (>=1.27.2)"] kubeflow = ["google-cloud-storage", "kubernetes", "minio", "sh"] -launch = ["boto3", "botocore", "chardet", "google-cloud-storage", "iso8601", "kubernetes", "nbconvert", "nbformat", "typing-extensions"] +launch = ["awscli", "boto3", "botocore", "chardet", "google-auth", "google-cloud-artifact-registry", "google-cloud-compute", "google-cloud-storage", "iso8601", "kubernetes", "nbconvert", "nbformat", "typing-extensions"] media = ["bokeh", "moviepy", "numpy", "pillow", "plotly", "rdkit-pypi", "soundfile"] models = ["cloudpickle"] sweeps = ["sweeps (>=0.2.0)"] @@ -4183,18 +3826,18 @@ watchdog = ["watchdog"] [[package]] name = "wheel" -version = "0.38.4" +version = "0.40.0" description = "A built-package format for Python" category = "dev" optional = false python-versions = ">=3.7" files = [ - {file = "wheel-0.38.4-py3-none-any.whl", hash = "sha256:b60533f3f5d530e971d6737ca6d58681ee434818fab630c83a734bb10c083ce8"}, - {file = "wheel-0.38.4.tar.gz", hash = "sha256:965f5259b566725405b05e7cf774052044b1ed30119b5d586b2703aafe8719ac"}, + {file = "wheel-0.40.0-py3-none-any.whl", hash = "sha256:d236b20e7cb522daf2390fa84c55eea81c5c30190f90f29ae2ca1ad8355bf247"}, + {file = "wheel-0.40.0.tar.gz", hash = "sha256:cd1196f3faee2b31968d626e1731c94f99cbdb67cf5a46e4f5656cbee7738873"}, ] [package.extras] -test = ["pytest (>=3.0.0)"] +test = ["pytest (>=6.0.0)"] [[package]] name = "wrapt" @@ -4299,5 +3942,5 @@ testing = ["big-O", "flake8 (<5)", "jaraco.functools", "jaraco.itertools", "more [metadata] lock-version = "2.0" -python-versions = ">=3.8,<3.11" -content-hash = "f359af13175bcd62eeb286cdc6f5dff323b71a81aa1ad69f8c1714e560e49f76" +python-versions = ">=3.8,<3.12" +content-hash = "bc82e4f57f2ad81b5c6e3aac8e1240434bc8782c2271009a558887931eb697dc" diff --git a/pyproject.toml b/pyproject.toml index fbf3f50..c394c11 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -6,7 +6,7 @@ authors = ["Cristian Garcia "] license = "MIT" [tool.poetry.dependencies] -python = ">=3.8,<3.11" +python = ">=3.8,<3.12" jax = ">=0.4.0" jaxlib = ">=0.4.0" flax = ">=0.6.0" From 1ad983d048a875507db349eb074367257b5af294 Mon Sep 17 00:00:00 2001 From: Cristian Garcia Date: Thu, 16 Mar 2023 19:30:22 +0000 Subject: [PATCH 3/3] restrict orbax version --- poetry.lock | 15 +++++++-------- pyproject.toml | 1 + 2 files changed, 8 insertions(+), 8 deletions(-) diff --git a/poetry.lock b/poetry.lock index c8f7bc9..1d661e1 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2145,31 +2145,30 @@ typing-extensions = ">=3.10.0" [[package]] name = "orbax" -version = "0.1.4" +version = "0.1.3" description = "Orbax" category = "main" optional = false python-versions = ">=3.8" files = [ - {file = "orbax-0.1.4-py3-none-any.whl", hash = "sha256:fe074bb1c0dfa302e03613c18febdd81191438d21cf393e962e3042a49819b08"}, - {file = "orbax-0.1.4.tar.gz", hash = "sha256:b2077e8814519393a4179715b6420b36f93f1bccff5fafc8e5a5307d890d4dd0"}, + {file = "orbax-0.1.3-py3-none-any.whl", hash = "sha256:a5268b372f28dd085ef1c400f0eb7514fd235c719989b5caa145f1ae5773811f"}, + {file = "orbax-0.1.3.tar.gz", hash = "sha256:e65171df1734da28478d8a2f2da837416e7c7a026a6280dc93264324ea40df5a"}, ] [package.dependencies] absl-py = "*" cached_property = "*" etils = "*" +flax = "*" importlib_resources = "*" -jax = ">=0.4.6" +jax = ">=0.4.1" jaxlib = "*" -msgpack = "*" numpy = "*" pyyaml = "*" tensorstore = ">=0.1.20" -typing_extensions = "*" [package.extras] -dev = ["flax", "pytest", "pytest-xdist"] +dev = ["pytest", "pytest-xdist"] [[package]] name = "packaging" @@ -3943,4 +3942,4 @@ testing = ["big-O", "flake8 (<5)", "jaraco.functools", "jaraco.itertools", "more [metadata] lock-version = "2.0" python-versions = ">=3.8,<3.12" -content-hash = "bc82e4f57f2ad81b5c6e3aac8e1240434bc8782c2271009a558887931eb697dc" +content-hash = "3da05c5e6414d63a33faa194b0a90e8aa3dd3fcd7f1bea9152270e3f2a887171" diff --git a/pyproject.toml b/pyproject.toml index c394c11..c5256c7 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -16,6 +16,7 @@ einop = "*" numpy = "*" # jax-metrics = {path = "../jax_metrics"} jax-metrics = "^0.2.1" +orbax = "<0.1.4" [tool.poetry.group.test.dependencies] pytest = ">=7.1.3"