68.950% of diff hit (target 86.362%)
View this Pull Request on Codecov
68.950% of diff hit (target 86.362%)
Annotations
codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/AssemblyResultSet.java#L616
Added line #L616 was not covered by tests
codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L97
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L118-L119
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L130
Added line #L130 was not covered by tests
codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L132
Added line #L132 was not covered by tests
codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L135-L136
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L139
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L144-L147
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L153-L154
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L158-L161
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L164-L165
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L169-L173
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L177
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L187
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L392
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L779
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L824-L825
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/PartiallyDeterminedHaplotypeComputationEngine.java#L827
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/utils/haplotype/PartiallyDeterminedHaplotype.java#L158
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codecov / codecov/patch
src/main/java/org/broadinstitute/hellbender/utils/haplotype/PartiallyDeterminedHaplotype.java#L163
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codecov / codecov/patch
src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java#L2171
Added line #L2171 was not covered by tests
codecov / codecov/patch
src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java#L2173-L2174
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codecov / codecov/patch
src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java#L2177
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codecov / codecov/patch
src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java#L2182
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codecov / codecov/patch
src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java#L2200-L2201
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