perl version ??

[yangzuokun]

perl Dimob.pl example/NC_000913.embl NC_003210_gis.txt

Unescaped left brace in regex is illegal here in regex; marked by <-- HERE in m/{{ <-- HERE .+}}/ at /home/yzk/software/islandpath/lib/Dimob/Config.pm line 81.
Compilation failed in require at /home/yzk/software/islandpath/lib/GenomeUtils.pm line 50.
BEGIN failed--compilation aborted at /home/yzk/software/islandpath/lib/GenomeUtils.pm line 50.
Compilation failed in require at ./Dimob.pl line 45.
BEGIN failed--compilation aborted at ./Dimob.pl line 45.

[cbertell]

Perl version available in the pre-installed docker container is 5.16.3.
For a ready-to go solution: to get the pre-installed version of IslandPath, install docker and run

docker pull brinkmanlab/islandpath:1.0.0

Then follow instructions on how to run it: https://hub.docker.com/r/brinkmanlab/islandpath/
I'll try to update the code to the newer perl version when I can.