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biolink_model.owl.ttl
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@prefix AGRKB: <https://www.alliancegenome.org/> .
@prefix CHADO: <http://gmod.org/wiki/Chado/> .
@prefix CHEMBL.MECHANISM: <https://www.ebi.ac.uk/chembl/mechanism/inspect/> .
@prefix CPT: <https://www.ama-assn.org/practice-management/cpt/> .
@prefix CTD: <http://ctdbase.org/> .
@prefix DGIdb: <https://www.dgidb.org/interaction_types> .
@prefix DOID-PROPERTY: <http://purl.obolibrary.org/obo/doid#> .
@prefix DrugCentral: <http://drugcentral.org/drugcard/> .
@prefix ECTO: <http://purl.obolibrary.org/obo/ECTO_> .
@prefix EDAM-DATA: <http://edamontology.org/data_> .
@prefix EFO: <http://www.ebi.ac.uk/efo/EFO_> .
@prefix ExO: <http://purl.obolibrary.org/obo/ExO_> .
@prefix FMA: <http://purl.obolibrary.org/obo/FMA_> .
@prefix FYPO: <http://purl.obolibrary.org/obo/FYPO_> .
@prefix GOREL: <http://purl.obolibrary.org/obo/GOREL_> .
@prefix HANCESTRO: <http://www.ebi.ac.uk/ancestro/ancestro_> .
@prefix HCPCS: <http://purl.bioontology.org/ontology/HCPCS/> .
@prefix HsapDv: <http://purl.obolibrary.org/obo/HsapDv_> .
@prefix IAO: <http://purl.obolibrary.org/obo/IAO_> .
@prefix INO: <http://purl.obolibrary.org/obo/INO_> .
@prefix LOINC: <http://loinc.org/rdf/> .
@prefix MAXO: <http://purl.obolibrary.org/obo/MAXO_> .
@prefix MESH: <http://id.nlm.nih.gov/mesh/> .
@prefix MI: <http://purl.obolibrary.org/obo/MI_> .
@prefix NBO-PROPERTY: <http://purl.obolibrary.org/obo/nbo#> .
@prefix NCIT-OBO: <http://purl.obolibrary.org/obo/ncit#> .
@prefix NDDF: <http://purl.bioontology.org/ontology/NDDF/> .
@prefix OBAN: <http://purl.org/oban/> .
@prefix OIO: <http://www.geneontology.org/formats/oboInOwl#> .
@prefix PHAROS: <http://pharos.nih.gov> .
@prefix PathWhiz: <http://smpdb.ca/pathways/#> .
@prefix REPODB: <http://apps.chiragjpgroup.org/repoDB/> .
@prefix RO: <http://purl.obolibrary.org/obo/RO_> .
@prefix RXNORM: <http://purl.bioontology.org/ontology/RXNORM/> .
@prefix SEMMEDDB: <https://skr3.nlm.nih.gov/SemMedDB> .
@prefix SIO: <http://semanticscience.org/resource/SIO_> .
@prefix SNOMEDCT: <http://snomed.info/id/> .
@prefix STY: <http://purl.bioontology.org/ontology/STY/> .
@prefix UBERGRAPH: <http://translator.renci.org/ubergraph-axioms.ofn#> .
@prefix UBERON_CORE: <http://purl.obolibrary.org/obo/uberon/core#> .
@prefix UBERON_NONAMESPACE: <http://purl.obolibrary.org/obo/core#> .
@prefix UMLSSG: <https://lhncbc.nlm.nih.gov/semanticnetwork/download/sg_archive/SemGroups-v04.txt> .
@prefix UO-PROPERTY: <http://purl.obolibrary.org/obo/uo#> .
@prefix VANDF: <https://www.nlm.nih.gov/research/umls/sourcereleasedocs/current/VANDF/> .
@prefix VMC: <https://github.com/ga4gh/vr-spec/> .
@prefix WBVocab: <http://bio2rdf.org/wormbase_vocabulary> .
@prefix WBbt: <http://purl.obolibrary.org/obo/WBbt_> .
@prefix WIKIDATA: <https://www.wikidata.org/entity/> .
@prefix WIKIDATA_PROPERTY: <https://www.wikidata.org/prop/> .
@prefix XPO: <http://purl.obolibrary.org/obo/XPO_> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix bioschemas: <https://bioschemas.org/> .
@prefix dcat: <http://www.w3.org/ns/dcat#> .
@prefix dcid: <https://datacommons.org/browser/> .
@prefix dcmitype: <http://purl.org/dc/dcmitype/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix fabio: <http://purl.org/spar/fabio/> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix gff3: <https://github.com/The-Sequence-Ontology/Specifications/blob/master/gff3.md#> .
@prefix gpi: <https://github.com/geneontology/go-annotation/blob/master/specs/gpad-gpi-2-0.md#> .
@prefix linkml: <https://w3id.org/linkml/> .
@prefix orphanet: <http://www.orpha.net/ORDO/Orphanet_> .
@prefix os: <https://github.com/cmungall/owlstar/blob/master/owlstar.ttl> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix pav: <http://purl.org/pav/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix qud: <http://qudt.org/1.1/schema/qudt#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix schema1: <http://schema.org/> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix wgs1: <http://www.w3.org/2003/01/geo/wgs84_pos> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
<http://purl.obolibrary.org/obo/UO_0000187> a rdfs:Datatype ;
owl:equivalentClass xsd:double .
<http://purl.obolibrary.org/obo/UO_0010006> a rdfs:Datatype ;
owl:equivalentClass xsd:double .
<https://w3id.org/biolink/biolink-model.owl.ttl> a owl:Ontology ;
rdfs:label "Biolink-Model" ;
dct:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
pav:version "4.2.6-rc5" ;
skos:definition "Entity and association taxonomy and datamodel for life-sciences data" .
biolink:BehavioralOutcome a owl:Class ;
rdfs:label "behavioral outcome" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:onProperty linkml:mixins ;
owl:someValuesFrom biolink:Outcome ],
linkml:ClassDefinition ;
skos:definition "An outcome resulting from an exposure event which is the manifestation of human behavior." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:DiseaseOrPhenotypicFeatureOutcome a owl:Class ;
rdfs:label "disease or phenotypic feature outcome" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:onProperty linkml:mixins ;
owl:someValuesFrom biolink:Outcome ],
linkml:ClassDefinition ;
skos:definition "Physiological outcomes resulting from an exposure event which is the manifestation of a disease or other characteristic phenotype." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:EpidemiologicalOutcome a owl:Class ;
rdfs:label "epidemiological outcome" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:onProperty linkml:mixins ;
owl:someValuesFrom biolink:Outcome ],
linkml:ClassDefinition ;
skos:definition "An epidemiological outcome, such as societal disease burden, resulting from an exposure event." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:relatedMatch <http://purl.obolibrary.org/obo/NCIT_C19291> .
biolink:HospitalizationOutcome a owl:Class ;
rdfs:label "hospitalization outcome" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:onProperty linkml:mixins ;
owl:someValuesFrom biolink:Outcome ],
linkml:ClassDefinition ;
skos:definition "An outcome resulting from an exposure event which is the increased manifestation of acute (e.g. emergency room visit) or chronic (inpatient) hospitalization." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:MappingCollection a owl:Class ;
rdfs:label "mapping collection" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:minCardinality 0 ;
owl:onProperty biolink:predicate_mappings ],
[ a owl:Restriction ;
owl:allValuesFrom biolink:PredicateMapping ;
owl:onProperty biolink:predicate_mappings ],
linkml:ClassDefinition ;
skos:definition "A collection of deprecated mappings." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:MortalityOutcome a owl:Class ;
rdfs:label "mortality outcome" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:onProperty linkml:mixins ;
owl:someValuesFrom biolink:Outcome ],
linkml:ClassDefinition ;
skos:definition "An outcome of death from resulting from an exposure event." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:PathologicalAnatomicalOutcome a owl:Class ;
rdfs:label "pathological anatomical outcome" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:onProperty linkml:mixins ;
owl:someValuesFrom biolink:Outcome ],
linkml:ClassDefinition ;
skos:definition "An outcome resulting from an exposure event which is the manifestation of an abnormal anatomical structure." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:PathologicalProcessOutcome a owl:Class ;
rdfs:label "pathological process outcome" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:onProperty linkml:mixins ;
owl:someValuesFrom biolink:Outcome ],
linkml:ClassDefinition ;
skos:definition "An outcome resulting from an exposure event which is the manifestation of a pathological process." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:RelationshipType a owl:Class ;
rdfs:label "relationship type" ;
rdfs:subClassOf biolink:OntologyClass ;
skos:definition "An OWL property used as an edge label" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:SocioeconomicOutcome a owl:Class ;
rdfs:label "socioeconomic outcome" ;
rdfs:subClassOf [ a owl:Restriction ;
owl:onProperty linkml:mixins ;
owl:someValuesFrom biolink:Outcome ],
linkml:ClassDefinition ;
skos:definition "An general social or economic outcome, such as healthcare costs, utilization, etc., resulting from an exposure event" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:adverse_event_of a owl:ObjectProperty ;
rdfs:label "adverse event of" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:ChemicalOrDrugOrTreatment ;
rdfs:subPropertyOf biolink:affected_by ;
owl:inverseOf biolink:has_adverse_event ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:amount_or_activity_decreased_by a owl:DatatypeProperty ;
rdfs:label "amount or activity decreased by" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:decreases_amount_or_activity_of ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:amount_or_activity_increased_by a owl:DatatypeProperty ;
rdfs:label "amount or activity increased by" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:increases_amount_or_activity_of ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:animal_model_available_from a owl:ObjectProperty ;
rdfs:label "animal model available from" ;
rdfs:range biolink:DiseaseOrPhenotypicFeature ;
rdfs:subPropertyOf biolink:node_property ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:binds a owl:DatatypeProperty,
owl:SymmetricProperty ;
rdfs:label "binds" ;
rdfs:subPropertyOf biolink:directly_physically_interacts_with ;
skos:closeMatch DGIdb:binder ;
skos:definition "A causal mechanism mediated by the direct contact between effector and target chemical or biomolecular entity, which form a stable physical interaction." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
biolink:canonical_predicate true .
biolink:biological_role_mixin a owl:DatatypeProperty ;
rdfs:label "biological role mixin" ;
skos:definition "A role played by the chemical entity or part thereof within a biological context." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:narrowMatch <http://purl.obolibrary.org/obo/CHEBI_24432> .
biolink:bonferonni_adjusted_p_value a owl:DatatypeProperty ;
rdfs:label "bonferonni adjusted p value" ;
rdfs:range xsd:float ;
rdfs:subPropertyOf biolink:adjusted_p_value ;
skos:definition "The Bonferroni correction is an adjustment made to P values when several dependent or independent statistical tests are being performed simultaneously on a single data set. To perform a Bonferroni correction, divide the critical P value (α) by the number of comparisons being made. P is always italicized and capitalized. The actual P value* should be expressed (P=. 04) rather than expressing a statement of inequality (P<. 05), unless P<." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:broad_matches a owl:DatatypeProperty ;
rdfs:label "broad matches" ;
skos:definition "A list of terms from different schemas or terminology systems that have a broader meaning. Such terms often describe a more general concept from different ontological perspectives." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:broad_synonym a owl:DatatypeProperty ;
rdfs:label "broad synonym" ;
rdfs:subPropertyOf biolink:synonym ;
skos:exactMatch OIO:hasBroadSynonym ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:can_be_carried_out_by a owl:ObjectProperty ;
rdfs:label "can be carried out by" ;
rdfs:domain biolink:Occurrent ;
rdfs:range biolink:NamedThing ;
rdfs:subPropertyOf biolink:actively_involves ;
owl:inverseOf biolink:capable_of ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:caused_by a owl:DatatypeProperty ;
rdfs:label "caused by" ;
rdfs:subPropertyOf biolink:contribution_from ;
owl:inverseOf biolink:causes ;
skos:altLabel "disease caused by disruption of",
"disease has basis in dysfunction of",
"realized in response to",
"realized in response to stimulus" ;
skos:definition "holds between two entities where the occurrence, existence, or activity of one is caused by the occurrence or generation of the other" ;
skos:exactMatch WIKIDATA_PROPERTY:P828 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:narrowMatch RO:0001022,
RO:0002608,
RO:0004019,
RO:0004020,
RO:0004028,
RO:0009501 .
biolink:chemical_entity_or_drug_or_treatment a owl:DatatypeProperty ;
rdfs:label "chemical entity or drug or treatment" ;
skos:definition "A union of chemical entities and children, and drug or treatment." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:chemical_role_mixin a owl:DatatypeProperty ;
rdfs:label "chemical role mixin" ;
skos:definition "A role played by the chemical entity or part thereof within a chemical context." ;
skos:exactMatch <http://purl.obolibrary.org/obo/CHEBI_51086> ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:chemically_similar_to a owl:DatatypeProperty,
owl:SymmetricProperty ;
rdfs:label "chemically similar to" ;
rdfs:subPropertyOf biolink:similar_to ;
skos:definition "holds between one small molecule entity and another that it approximates for purposes of scientific study, in virtue of its exhibiting similar features of the studied entity." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:narrowMatch <http://purl.obolibrary.org/obo/CHEBI_has_functional_parent>,
<http://purl.obolibrary.org/obo/CHEBI_has_parent_hydride>,
<http://purl.obolibrary.org/obo/CHEBI_is_conjugate_acid_of>,
<http://purl.obolibrary.org/obo/CHEBI_is_conjugate_base_of>,
<http://purl.obolibrary.org/obo/CHEBI_is_enantiomer_of>,
<http://purl.obolibrary.org/obo/CHEBI_is_tautomer_of>,
<http://purl.obolibrary.org/obo/NCIT_has_salt_form> ;
biolink:canonical_predicate true .
biolink:chi_squared_statistic a owl:DatatypeProperty ;
rdfs:label "chi squared statistic" ;
rdfs:range xsd:float ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "represents the chi-squared statistic computed from observations" ;
skos:exactMatch <http://purl.obolibrary.org/obo/STATO_0000030> ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:clinical_modifier_qualifier a owl:ObjectProperty ;
rdfs:label "clinical modifier qualifier" ;
rdfs:range biolink:ClinicalModifier ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "the method or process of administering a pharmaceutical compound to achieve a therapeutic effect in humans or animals." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:coexpressed_with a owl:ObjectProperty,
owl:SymmetricProperty ;
rdfs:label "coexpressed with" ;
rdfs:domain biolink:GeneOrGeneProduct ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:correlated_with ;
skos:definition "holds between any two genes or gene products, in which both are generally expressed within a single defined experimental context." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
biolink:canonical_predicate true .
biolink:colocalizes_with a owl:DatatypeProperty,
owl:SymmetricProperty ;
rdfs:label "colocalizes with" ;
rdfs:subPropertyOf biolink:coexists_with ;
skos:definition "holds between two entities that are observed to be located in the same place." ;
skos:exactMatch RO:0002325 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
biolink:canonical_predicate true .
biolink:completed_by a owl:DatatypeProperty ;
rdfs:label "completed by" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:has_completed ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:concept_count_object a owl:DatatypeProperty ;
rdfs:label "concept count object" ;
rdfs:range xsd:integer ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "The number of instances in a dataset/cohort whose records contain the concept in the object slot of an association." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:concept_count_subject a owl:DatatypeProperty ;
rdfs:label "concept count subject" ;
rdfs:range xsd:integer ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "The number of instances in a dataset/cohort whose records contain the concept in the subject slot of an association." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:concept_pair_count a owl:DatatypeProperty ;
rdfs:label "concept pair count" ;
rdfs:range xsd:integer ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "The number of instances in a dataset/cohort whose records contain both the subject and object concept of an association." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:condition_ameliorated_by a owl:ObjectProperty ;
rdfs:label "condition ameliorated by" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:ChemicalOrDrugOrTreatment ;
rdfs:subPropertyOf biolink:affected_by ;
owl:inverseOf biolink:ameliorates_condition ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:condition_associated_with_gene a owl:ObjectProperty ;
rdfs:label "condition associated with gene" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:Gene ;
rdfs:subPropertyOf biolink:genetically_associated_with ;
owl:inverseOf biolink:gene_associated_with_condition ;
skos:altLabel "disease associated with gene" ;
skos:definition "holds between a gene and a disease or phenotypic feature that may be influenced, contribute to, or be correlated with the gene or its alleles/products" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:narrowMatch <http://purl.obolibrary.org/obo/NCIT_R176>,
RO:0004000 .
biolink:condition_exacerbated_by a owl:ObjectProperty ;
rdfs:label "condition exacerbated by" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:ChemicalOrDrugOrTreatment ;
rdfs:subPropertyOf biolink:affected_by ;
owl:inverseOf biolink:exacerbates_condition ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:condition_predisposed_by a owl:ObjectProperty ;
rdfs:label "condition predisposed by" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:ChemicalOrDrugOrTreatment ;
rdfs:subPropertyOf biolink:likelihood_affected_by ;
owl:inverseOf biolink:predisposes_to_condition ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:condition_prevented_by a owl:ObjectProperty ;
rdfs:label "condition prevented by" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:ChemicalOrDrugOrTreatment ;
rdfs:subPropertyOf biolink:affected_by ;
owl:inverseOf biolink:preventative_for_condition ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:condition_promoted_by a owl:ObjectProperty ;
rdfs:label "condition promoted by" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:ChemicalOrDrugOrTreatment ;
rdfs:subPropertyOf biolink:likelihood_affected_by ;
owl:inverseOf biolink:promotes_condition ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:consumed_by a owl:ObjectProperty ;
rdfs:label "consumed by" ;
rdfs:domain biolink:NamedThing ;
rdfs:range biolink:NamedThing ;
rdfs:subPropertyOf biolink:is_input_of ;
owl:inverseOf biolink:consumes ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:contains_process a owl:DatatypeProperty ;
rdfs:label "contains process" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:occurs_in ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:created_with a owl:DatatypeProperty ;
rdfs:label "created with" ;
rdfs:domain biolink:Dataset ;
rdfs:subPropertyOf biolink:node_property ;
skos:exactMatch pav:createdWith ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:dataset_download_url a owl:DatatypeProperty ;
rdfs:label "dataset download url" ;
rdfs:domain biolink:Dataset ;
rdfs:subPropertyOf biolink:node_property ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:decreased_amount_in a owl:DatatypeProperty ;
rdfs:label "decreased amount in" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:has_decreased_amount ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:decreased_likelihood_associated_with a owl:DatatypeProperty ;
rdfs:label "decreased likelihood associated with" ;
rdfs:subPropertyOf biolink:likelihood_associated_with ;
owl:inverseOf biolink:associated_with_decreased_likelihood_of ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:develops_into a owl:DatatypeProperty ;
rdfs:label "develops into" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:develops_from ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:disrupted_by a owl:DatatypeProperty ;
rdfs:label "disrupted by" ;
rdfs:subPropertyOf biolink:affected_by ;
owl:inverseOf biolink:disrupts ;
skos:definition "describes a relationship where the structure, function, or occurrence of one entity is degraded or interfered with by another." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:download_url a owl:DatatypeProperty ;
rdfs:label "download url" ;
rdfs:domain biolink:InformationContentEntity ;
rdfs:subPropertyOf biolink:node_property ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:end_coordinate a owl:DatatypeProperty ;
rdfs:label "end coordinate" ;
rdfs:subPropertyOf biolink:base_coordinate ;
skos:altLabel "end" ;
skos:closeMatch <http://biohackathon.org/resource/faldo#end> ;
skos:definition "The position at which the subject genomic entity ends on the chromosome or other entity to which it is located on." ;
skos:exactMatch gff3:end ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:evidence_count a owl:DatatypeProperty ;
rdfs:label "evidence count" ;
rdfs:range xsd:integer ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "The number of evidence instances that are connected to an association." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:exact_matches a owl:DatatypeProperty ;
rdfs:label "exact matches" ;
skos:definition "A list of terms from different schemas or terminology systems that have an identical meaning. Such terms often describe the same concept from different ontological perspectives." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:exact_synonym a owl:DatatypeProperty ;
rdfs:label "exact synonym" ;
rdfs:subPropertyOf biolink:synonym ;
skos:exactMatch OIO:hasExactSynonym ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:expected_count a owl:DatatypeProperty ;
rdfs:label "expected count" ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "The expected (calculated) number of instances in a dataset/cohort whose records contain both the subject and object concept of an association if the subject and object concepts are independent." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:expresses a owl:ObjectProperty ;
rdfs:label "expresses" ;
rdfs:domain biolink:AnatomicalEntity ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:location_of ;
owl:inverseOf biolink:expressed_in ;
skos:altLabel "anatomy expresses gene" ;
skos:definition "holds between an anatomical entity and gene or gene product that is expressed there" ;
skos:exactMatch RO:0002292 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:extraction_confidence_score a owl:DatatypeProperty ;
rdfs:label "extraction confidence score" ;
rdfs:range xsd:integer ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "A quantitative confidence value that represents the probability of obtaining a result at least as extreme as that actually obtained, assuming that the actual value was the result of chance alone." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:gene_fusion_with a owl:ObjectProperty,
owl:SymmetricProperty ;
rdfs:label "gene_fusion_with" ;
rdfs:domain biolink:Gene ;
rdfs:range biolink:Gene ;
rdfs:subPropertyOf biolink:genetically_interacts_with ;
skos:definition "holds between two independent genes that have fused through translocation, interstitial deletion, or chromosomal inversion to form a new, hybrid gene. Fusion genes are often implicated in various neoplasms and cancers." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
biolink:canonical_predicate true .
biolink:genetic_association a owl:DatatypeProperty,
owl:SymmetricProperty ;
rdfs:label "genetic association" ;
rdfs:subPropertyOf biolink:associated_with ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:genetic_neighborhood_of a owl:ObjectProperty,
owl:SymmetricProperty ;
rdfs:label "genetic_neighborhood_of" ;
rdfs:domain biolink:Gene ;
rdfs:range biolink:Gene ;
rdfs:subPropertyOf biolink:genetically_interacts_with ;
skos:definition "holds between two genes located nearby one another on a chromosome." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
biolink:canonical_predicate true .
biolink:has_active_component a owl:ObjectProperty ;
rdfs:label "has active component" ;
rdfs:domain biolink:CellularComponent ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:active_in ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_author a owl:ObjectProperty ;
rdfs:label "has author" ;
rdfs:domain biolink:Publication ;
rdfs:range biolink:Agent ;
rdfs:subPropertyOf biolink:has_contributor ;
owl:inverseOf biolink:author ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_biomarker a owl:ObjectProperty ;
rdfs:label "has biomarker" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:ChemicalEntityOrGeneOrGeneProduct ;
rdfs:subPropertyOf biolink:correlated_with ;
owl:inverseOf biolink:biomarker_for ;
skos:definition """holds between a disease or phenotypic feature and a measurable chemical entity that is used as an indicator of the presence or state of the disease or feature.
# metabolite""" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:narrowMatch <http://purl.obolibrary.org/obo/NCIT_disease_has_molecular_abnormality>,
<http://purl.obolibrary.org/obo/NCIT_disease_is_marked_by_gene> .
biolink:has_catalyst a owl:DatatypeProperty ;
rdfs:label "has catalyst" ;
rdfs:subPropertyOf biolink:has_participant ;
owl:inverseOf biolink:catalyzes ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_chemical_formula a owl:DatatypeProperty ;
rdfs:label "has chemical formula" ;
rdfs:range xsd:string ;
rdfs:subPropertyOf biolink:node_property ;
skos:definition "description of chemical compound based on element symbols" ;
skos:exactMatch WIKIDATA_PROPERTY:P274 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_confidence_level a owl:DatatypeProperty ;
rdfs:label "has confidence level" ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "connects an association to a qualitative term denoting the level of confidence" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_constituent a owl:ObjectProperty ;
rdfs:label "has constituent" ;
rdfs:range biolink:MolecularEntity ;
rdfs:subPropertyOf biolink:node_property ;
skos:definition "one or more molecular entities within a chemical mixture" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_contraindication a owl:ObjectProperty ;
rdfs:label "has contraindication" ;
rdfs:domain biolink:BiologicalEntity ;
rdfs:range biolink:ChemicalOrDrugOrTreatment ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:contraindicated_in ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_editor a owl:ObjectProperty ;
rdfs:label "has editor" ;
rdfs:domain biolink:Publication ;
rdfs:range biolink:Agent ;
rdfs:subPropertyOf biolink:has_contributor ;
owl:inverseOf biolink:editor ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_frameshift_variant a owl:ObjectProperty ;
rdfs:label "has frameshift variant" ;
rdfs:domain biolink:GenomicEntity ;
rdfs:range biolink:SequenceVariant ;
rdfs:subPropertyOf biolink:has_sequence_variant ;
owl:inverseOf biolink:is_frameshift_variant_of ;
skos:altLabel "splice acceptor variant",
"splice donor variant",
"splice region variant" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_gene_product a owl:ObjectProperty ;
rdfs:label "has gene product" ;
rdfs:domain biolink:Gene ;
rdfs:range biolink:GeneProductMixin ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:gene_product_of ;
skos:closeMatch <http://purl.obolibrary.org/obo/PR_has_gene_template> ;
skos:definition "holds between a gene and a transcribed and/or translated product generated from it" ;
skos:exactMatch <http://purl.obolibrary.org/obo/NCIT_gene_encodes_gene_product>,
RO:0002205,
WIKIDATA_PROPERTY:P688 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:narrowMatch <http://purl.obolibrary.org/obo/NCIT_R178> .
biolink:has_missense_variant a owl:ObjectProperty ;
rdfs:label "has missense variant" ;
rdfs:domain biolink:GenomicEntity ;
rdfs:range biolink:SequenceVariant ;
rdfs:subPropertyOf biolink:has_sequence_variant ;
owl:inverseOf biolink:is_missense_variant_of ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_nearby_variant a owl:ObjectProperty ;
rdfs:label "has nearby variant" ;
rdfs:domain biolink:GenomicEntity ;
rdfs:range biolink:SequenceVariant ;
rdfs:subPropertyOf biolink:has_sequence_variant ;
owl:inverseOf biolink:is_nearby_variant_of ;
skos:altLabel "3 prime UTR variant",
"5 prime UTR premature start codon gain variant",
"5 prime UTR variant",
"intron variant",
"non coding transcript exon variant" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_negative_upstream_actor a owl:ObjectProperty ;
rdfs:label "has negative upstream actor" ;
rdfs:domain biolink:BiologicalProcess ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:has_upstream_actor ;
owl:inverseOf biolink:acts_upstream_of_negative_effect ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_negative_upstream_or_within_actor a owl:ObjectProperty ;
rdfs:label "has negative upstream or within actor" ;
rdfs:domain biolink:BiologicalProcess ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:has_upstream_or_within_actor ;
owl:inverseOf biolink:acts_upstream_of_or_within_negative_effect ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_non_coding_variant a owl:ObjectProperty ;
rdfs:label "has non coding variant" ;
rdfs:domain biolink:GenomicEntity ;
rdfs:range biolink:SequenceVariant ;
rdfs:subPropertyOf biolink:has_sequence_variant ;
owl:inverseOf biolink:is_non_coding_variant_of ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_nonsense_variant a owl:ObjectProperty ;
rdfs:label "has nonsense variant" ;
rdfs:domain biolink:GenomicEntity ;
rdfs:range biolink:SequenceVariant ;
rdfs:subPropertyOf biolink:has_sequence_variant ;
owl:inverseOf biolink:is_nonsense_variant_of ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_positive_upstream_actor a owl:ObjectProperty ;
rdfs:label "has positive upstream actor" ;
rdfs:domain biolink:BiologicalProcess ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:has_upstream_actor ;
owl:inverseOf biolink:acts_upstream_of_positive_effect ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_positive_upstream_or_within_actor a owl:ObjectProperty ;
rdfs:label "has positive upstream or within actor" ;
rdfs:domain biolink:BiologicalProcess ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:has_upstream_or_within_actor ;
owl:inverseOf biolink:acts_upstream_of_or_within_positive_effect ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_provider a owl:ObjectProperty ;
rdfs:label "has provider" ;
rdfs:domain biolink:InformationContentEntity ;
rdfs:range biolink:Agent ;
rdfs:subPropertyOf biolink:has_contributor ;
owl:inverseOf biolink:provider ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_publisher a owl:ObjectProperty ;
rdfs:label "has publisher" ;
rdfs:domain biolink:Publication ;
rdfs:range biolink:Agent ;
rdfs:subPropertyOf biolink:has_contributor ;
owl:inverseOf biolink:publisher ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_receptor a owl:ObjectProperty ;
rdfs:label "has receptor" ;
rdfs:domain biolink:ExposureEvent ;
rdfs:range biolink:OrganismalEntity ;
rdfs:subPropertyOf biolink:node_property ;
skos:definition "the organism or organism part being exposed" ;
skos:exactMatch ExO:0000001 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_route a owl:DatatypeProperty ;
rdfs:label "has route" ;
rdfs:domain biolink:ExposureEvent ;
rdfs:subPropertyOf biolink:node_property ;
skos:definition "the process that results in the stressor coming into direct contact with the receptor" ;
skos:exactMatch ExO:0000055 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:narrowMatch LOINC:has_pharmaceutical_route,
<http://purl.obolibrary.org/obo/SNOMED_has_dose_form_intended_site>,
<http://purl.obolibrary.org/obo/SNOMED_has_route_of_administration> .
biolink:has_splice_site_variant a owl:ObjectProperty ;
rdfs:label "has splice site variant" ;
rdfs:domain biolink:GenomicEntity ;
rdfs:range biolink:SequenceVariant ;
rdfs:subPropertyOf biolink:has_sequence_variant ;
owl:inverseOf biolink:is_splice_site_variant_of ;
skos:altLabel "downstream gene variant",
"upstream gene variant" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_stressor a owl:DatatypeProperty ;
rdfs:label "has stressor" ;
rdfs:domain biolink:ExposureEvent ;
rdfs:subPropertyOf biolink:node_property ;
skos:altLabel "has stimulus" ;
skos:definition "the process or entity that the receptor is being exposed to" ;
skos:exactMatch ExO:0000000 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_supporting_study_result a owl:DatatypeProperty ;
rdfs:label "has supporting study result" ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "connects an association to an instance of supporting study result" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_synonymous_variant a owl:ObjectProperty ;
rdfs:label "has synonymous variant" ;
rdfs:domain biolink:GenomicEntity ;
rdfs:range biolink:SequenceVariant ;
rdfs:subPropertyOf biolink:has_sequence_variant ;
owl:inverseOf biolink:is_synonymous_variant_of ;
skos:altLabel "stop gained" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_target a owl:ObjectProperty ;
rdfs:label "has target" ;
rdfs:domain biolink:Disease ;
rdfs:range biolink:Gene ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:target_for ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:has_topic a owl:ObjectProperty ;
rdfs:label "has topic" ;
rdfs:range biolink:OntologyClass ;
rdfs:subPropertyOf biolink:node_property ;
skos:altLabel "descriptors",
"topic" ;
skos:definition "Connects a node to a vocabulary term or ontology class that describes some aspect of the entity. In general specific characterization is preferred. See https://github.com/biolink/biolink-model/issues/238" ;
skos:exactMatch foaf:topic ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:in_cell_population_with a owl:ObjectProperty,
owl:SymmetricProperty ;
rdfs:label "in cell population with" ;
rdfs:domain biolink:GeneOrGeneProduct ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:coexists_with ;
skos:definition "holds between two genes or gene products that are expressed in the same cell type or population" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
biolink:canonical_predicate true .
biolink:in_complex_with a owl:ObjectProperty,
owl:SymmetricProperty ;
rdfs:label "in complex with" ;
rdfs:domain biolink:GeneOrGeneProduct ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:coexists_with ;
skos:broadMatch SIO:010285 ;
skos:definition "holds between two genes or gene products that are part of (or code for products that are part of) in the same macromolecular complex" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:relatedMatch SIO:010497 ;
biolink:canonical_predicate true .
biolink:in_linkage_disequilibrium_with a owl:DatatypeProperty,
owl:SymmetricProperty ;
rdfs:label "in linkage disequilibrium with" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
skos:definition "holds between two sequence variants, the presence of which are correlated in a population" ;
skos:exactMatch <http://purl.obolibrary.org/obo/NCIT_C16798> ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
biolink:canonical_predicate true .
biolink:in_pathway_with a owl:ObjectProperty,
owl:SymmetricProperty ;
rdfs:label "in pathway with" ;
rdfs:domain biolink:GeneOrGeneProduct ;
rdfs:range biolink:GeneOrGeneProduct ;
rdfs:subPropertyOf biolink:coexists_with ;
skos:definition "holds between two genes or gene products that are part of in the same biological pathway" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:relatedMatch SIO:010532 ;
biolink:canonical_predicate true .
biolink:increased_amount_of a owl:DatatypeProperty ;
rdfs:label "increased amount of" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:has_increased_amount ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:increased_likelihood_associated_with a owl:DatatypeProperty ;
rdfs:label "increased likelihood associated with" ;
rdfs:subPropertyOf biolink:likelihood_associated_with ;
owl:inverseOf biolink:associated_with_increased_likelihood_of ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:indirectly_physically_interacts_with a owl:DatatypeProperty,
owl:SymmetricProperty ;
rdfs:label "indirectly physically interacts with" ;
rdfs:subPropertyOf biolink:physically_interacts_with ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
biolink:canonical_predicate true .
biolink:is_active_ingredient_of a owl:ObjectProperty ;
rdfs:label "is active ingredient of" ;
rdfs:domain biolink:MolecularEntity ;
rdfs:range biolink:Drug ;
rdfs:subPropertyOf biolink:part_of ;
owl:inverseOf biolink:has_active_ingredient ;
skos:definition "holds between a molecular entity and a drug, in which the former is a part of the latter, and is a biologically active component" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:mappingRelation RO:0002249 .
biolink:is_assessed_by a owl:ObjectProperty ;
rdfs:label "is assessed by" ;
rdfs:domain biolink:NamedThing ;
rdfs:range biolink:NamedThing ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:assesses ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:is_diagnosed_by a owl:ObjectProperty ;
rdfs:label "is diagnosed by" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:DiagnosticAid ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:diagnoses ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:is_excipient_of a owl:ObjectProperty ;
rdfs:label "is excipient of" ;
rdfs:domain biolink:MolecularEntity ;
rdfs:range biolink:Drug ;
rdfs:subPropertyOf biolink:part_of ;
owl:inverseOf biolink:has_excipient ;
skos:definition "holds between a molecular entity and a drug in which the former is a part of the latter, and is a biologically inactive component" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:mappingRelation WIKIDATA:Q902638 .
biolink:is_metabolite_of a owl:ObjectProperty ;
rdfs:label "is metabolite of" ;
rdfs:domain biolink:MolecularEntity ;
rdfs:range biolink:MolecularEntity ;
rdfs:subPropertyOf biolink:derives_from ;
owl:inverseOf biolink:has_metabolite ;
skos:definition "holds between two molecular entities in which the first one is derived from the second one as a product of metabolism" ;
skos:exactMatch <http://purl.obolibrary.org/obo/CHEBI_25212> ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:note "The CHEBI ID represents a role rather than a predicate" .
biolink:is_molecular_consequence_of a owl:DatatypeProperty ;
rdfs:label "is molecular consequence of" ;
rdfs:domain biolink:OntologyClass ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:has_molecular_consequence ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:is_output_of a owl:ObjectProperty ;
rdfs:label "is output of" ;
rdfs:domain biolink:NamedThing ;
rdfs:range biolink:BiologicalProcessOrActivity ;
rdfs:subPropertyOf biolink:participates_in ;
owl:inverseOf biolink:has_output ;
skos:exactMatch RO:0002353 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> ;
skos:narrowMatch RO:0002354 .
biolink:is_side_effect_of a owl:ObjectProperty ;
rdfs:label "is side effect of" ;
rdfs:domain biolink:DiseaseOrPhenotypicFeature ;
rdfs:range biolink:ChemicalOrDrugOrTreatment ;
rdfs:subPropertyOf biolink:affected_by ;
owl:inverseOf biolink:has_side_effect ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:is_substrate_of a owl:ObjectProperty ;
rdfs:label "is substrate of" ;
rdfs:domain biolink:ChemicalEntityOrGeneOrGeneProduct ;
rdfs:range biolink:ChemicalEntityOrGeneOrGeneProduct ;
rdfs:subPropertyOf biolink:participates_in ;
owl:inverseOf biolink:has_substrate ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:ln_ratio a owl:DatatypeProperty ;
rdfs:label "ln ratio" ;
rdfs:range xsd:float ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "the natural log of the ratio of co-occurrence to expected" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:ln_ratio_confidence_interval a owl:DatatypeProperty ;
rdfs:label "ln ratio confidence interval" ;
rdfs:range xsd:float ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "The 99% confidence interval for the ln_ratio calculation (i.e. the range of values within which the true value has a 99% chance of falling)" ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:location_of_disease a owl:DatatypeProperty ;
rdfs:label "location of disease" ;
rdfs:subPropertyOf biolink:related_to ;
owl:inverseOf biolink:disease_has_location ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:log_odds_ratio a owl:DatatypeProperty ;
rdfs:label "log odds ratio" ;
rdfs:range xsd:float ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "The logarithm of the odds ratio, or the ratio of the odds of event Y occurring in an exposed group versus the odds of event Y occurring in a non-exposed group has " ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:log_odds_ratio_95_ci a owl:DatatypeProperty ;
rdfs:label "log odds ratio 95 ci" ;
rdfs:range xsd:float ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "The ninety-five percent confidence range in which the true log odds ratio for the sample population falls." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:logical_interpretation a owl:ObjectProperty ;
rdfs:label "logical interpretation" ;
rdfs:domain biolink:Association ;
rdfs:range biolink:LogicalInterpretationEnum ;
rdfs:subPropertyOf biolink:association_slot ;
skos:exactMatch os:LogicalInterpretation ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:mechanism_of_action a owl:DatatypeProperty ;
rdfs:label "mechanism of action" ;
rdfs:range xsd:boolean ;
rdfs:subPropertyOf biolink:association_slot ;
skos:definition "a boolean flag to indicate if the edge is part of a path or subgraph of a knowledge graph that constitutes the mechanism of action for a result." ;
skos:exactMatch LOINC:MTHU019741,
MI:2044,
<http://purl.obolibrary.org/obo/NCIT_C54680> ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:member_of a owl:DatatypeProperty ;
rdfs:label "member of" ;
rdfs:subPropertyOf biolink:related_to_at_concept_level ;
owl:inverseOf biolink:has_member ;
skos:closeMatch skos:member ;
skos:definition "Defines a mereological relation between a item and a collection." ;
skos:exactMatch RO:0002350 ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:mentioned_by a owl:DatatypeProperty ;
rdfs:label "mentioned by" ;
rdfs:subPropertyOf biolink:related_to_at_instance_level ;
owl:inverseOf biolink:mentions ;
skos:definition "refers to is a relation between one named thing and the information content entity that it makes reference to." ;
skos:inScheme <https://w3id.org/biolink/biolink-model> .
biolink:missing_from a owl:DatatypeProperty ;
rdfs:label "missing from" ;