From 1949e798a4b45b56130504e3810d39f72294c820 Mon Sep 17 00:00:00 2001 From: Julianus Pfeuffer Date: Mon, 2 May 2022 16:56:07 +0200 Subject: [PATCH] Update CHANGELOG.md --- CHANGELOG.md | 30 ++++++++++++++++-------------- 1 file changed, 16 insertions(+), 14 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 25934400..61b70837 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,7 +3,7 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). -## [1.0.0] nfcore/quantms - [18/03/2022] - Havana +## [1.0] nfcore/quantms - [05/02/2022] - Havana Initial release of nf-core/quantms, created with the [nf-core](https://nf-co.re/) template. @@ -11,9 +11,9 @@ Initial release of nf-core/quantms, created with the [nf-core](https://nf-co.re/ - New pipeline for DDA-LFQ data analysis - New pipeline for DDA-ISO data analysis -- New datasets for DDA-LFQ and DDA-ISO data analsysis +- New datasets for DDA-LFQ and DDA-ISO data analysis - Documentation added for DDA pipeline -- First pipeline for DIA-LFQ data analsysis +- First pipeline for DIA-LFQ data analysis ### `Fixed` @@ -23,16 +23,18 @@ Initial release of nf-core/quantms, created with the [nf-core](https://nf-co.re/ The pipeline is using Nextflow DSL2, each process will be run with its own [Biocontainer](https://biocontainers.pro/#/registry). This means that on occasion it is entirely possible for the pipeline to be using different versions of the same tool. However, the overall software dependency changes compared to the last release have been listed below for reference. -| Dependency | Version | -| ---------------- | ---------- | -| `comet` | 2021010 | -| `msgf+` | 2022.01.07 | -| `openms` | 2.8.0 | -| `sdrf-pipelines` | 0.0.21 | -| `percolator` | 3.5 | -| `pmultiqc` | 0.0.10 | -| `luciphor` | 2020_04_03 | -| `dia-nn` | 1.8.1 | -| `msstats` | 4.2.0 | +| Dependency | Version | +| --------------------- | ---------- | +| `thermorawfileparser` | 1.3.4 | +| `comet` | 2021010 | +| `msgf+` | 2022.01.07 | +| `openms` | 2.8.0 | +| `sdrf-pipelines` | 0.0.21 | +| `percolator` | 3.5 | +| `pmultiqc` | 0.0.11 | +| `luciphor` | 2020_04_03 | +| `dia-nn` | 1.8.1 | +| `msstats` | 4.2.0 | +| `msstatstmt` | 2.2.0 | ### `Deprecated`