NC_003210_Annot.txt

Locustag	begin	end	length	Strand	Begin	End	Length (bp)	Info	Description	Note	Supp Note	Operon	COG	StartCodon	SD energy
AdoCbl_riboswitch	1198103	1198252	150	+	1198103	1198252	150	CisReg	Rfam		"Rfam 2012;"				
Cobalamin	1179809	1179999	191	+	1179809	1179999	191	CisReg	Rfam	Cobalamin 1, 	"Rfam 2012;"				
Cobalamin 2	1216481	1216658	178	+	1216481	1216658	178	CisReg	Rfam		"Rfam 2012;"				
FMN	2020487	2020609	123	-	2020487	2020609	123	CisReg	Rfam		"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
Glycine	1372840	1372931	92	+	1372840	1372931	92	CisReg	Rfam		"Toledo-Arana et al. 2009;Rfam 2012;"				
L10	266232	266375	144	+	266232	266375	144	CisReg	Rfam	L10_leader, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
L13	2685181	2685233	53	-	2685181	2685233	53	CisReg	Rfam	L13_leader, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
L17DE	2691575	2691650	76	-	2691575	2691650	76	CisReg	Rfam		"Rfam 2012;"				
L19	1862270	1862308	39	-	1862270	1862308	39	CisReg	Rfam		"Toledo-Arana et al. 2009;"				
L20	1859870	1860008	139	-	1859870	1860008	139	CisReg	Rfam	L20_leader, 	"Rfam 2012;"				
L21	1577068	1577146	79	-	1577068	1577146	79	CisReg	Rfam	L21_leader, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
Lysine	826486	826683	198	-	826486	826683	198	CisReg	Rfam		"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
M-box	2765940	2766104	165	-	2765940	2766104	165	CisReg	Rfam	ykoK, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
MogR-T1	710749	712446	1698	-	710749	712446	1698	ASrna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;"				
MogR-T2	710749	710794	46	-	710749	710794	46	ASrna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;"				
PreQ1	907926	907973	48	+	907926	907973	48	CisReg	Rfam		"Toledo-Arana et al. 2009;Rfam 2012;"				
PrfA	204339	204468	130	-	204339	204468	130	CisReg	Johansson et al. 2002		"Toledo-Arana et al. 2009;Rfam 2012;"				
Purine-1	611017	611119	103	-	611017	611119	103	CisReg	Rfam	Purine, Purine 1, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
Purine-2	1958821	1958922	102	-	1958821	1958922	102	CisReg	Rfam	Purine, Purine 2, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
PyrR-1	1917471	1917574	104	-	1917471	1917574	104	CisReg	Rfam	PyrR, PyrR 1, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
PyrR-2	1918154	1918262	109	-	1918154	1918262	109	CisReg	Rfam	PyrR, PyrR 2, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
SAM-SreA	2490998	2491226	229	-	2490998	2491226	229	CisReg	Johansson et al. 2009	SAM, SAM 7, 	"Johansson 2009;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
SAM-SreB	637762	637940	179	-	637762	637940	179	CisReg	Johansson et al. 2009	SAM, SAM 3, 	"Johansson 2009;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
SAM-SreC	1716478	1716659	182	-	1716478	1716659	182	CisReg	Johansson et al. 2009	SAM, SAM 5, 	"Johansson 2009;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
SAM-SreD	1739418	1739633	216	-	1739418	1739633	216	CisReg	Johansson et al. 2009	SAM, SAM 6, 	"Johansson 2009;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
SAM-SreE	882759	882927	169	+	882759	882927	169	CisReg	Johansson et al. 2009	SAM, SAM 4, 	"Johansson 2009;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
SAM-SreF	309211	309408	198	-	309211	309408	198	CisReg	Johansson et al. 2009	SAM, SAM 2, 	"Johansson 2009;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
SAM-SreG	137135	137294	160	+	137135	137294	160	CisReg	Johansson et al. 2009	SAM, SAM 1, 	"Johansson 2009;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-1	258548	258760	213	+	258548	258760	213	CisReg	KEGG DAS	T-box, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
T-box-10	1711342	1711543	202	-	1711342	1711543	202	CisReg	Rfam	T-box, T-box 9, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-11	1809817	1810057	241	-	1809817	1810057	241	CisReg	Rfam	T-box, T-box 10, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
T-box-12	2100001	2100227	227	-	2100001	2100227	227	CisReg	Rfam	T-box, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
T-box-13	2287226	2287453	228	+	2287226	2287453	228	CisReg	Rfam	T-box, T-box 11, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-14	2668833	2669082	250	+	2668833	2669082	250	CisReg	Rfam	T-box, 	"Toledo-Arana et al. 2009;"				
T-box-15	2823255	2823477	223	-	2823255	2823477	223	CisReg	Rfam	T-box, T-box 12, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-2	1240774	1241002	229	+	1240774	1241002	229	CisReg	Rfam	T-box, T-box 1, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-3	1494104	1494276	173	-	1494104	1494276	173	CisReg	Rfam	T-box, T-box 2, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-4	1553972	1554200	229	-	1553972	1554200	229	CisReg	Rfam	T-box, T-box 3, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Mraheil et al. 2011-2;Rfam 2012;"				
T-box-5	1588901	1589127	227	-	1588901	1589127	227	CisReg	Rfam	T-box, T-box 4, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-6	1597218	1597448	231	-	1597218	1597448	231	CisReg	Rfam	T-box, T-box 5, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-7	1642603	1642811	209	-	1642603	1642811	209	CisReg	Rfam	T-box, T-box 6, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
T-box-8	1676392	1676617	226	-	1676392	1676617	226	CisReg	Rfam	T-box, T-box 7, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
T-box-9	1676666	1676907	242	-	1676666	1676907	242	CisReg	Rfam	T-box, T-box 8, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
TPP-1	340086	340191	106	+	340086	340191	106	CisReg	Rfam	TPP, TPP 1, TPP1, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
TPP-2	1461163	1461273	111	-	1461163	1461273	111	CisReg	Rfam	TPP, TPP 2, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
anti0043	48338	48637	300	-	48338	48637	300	ASrna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
anti0112	120158	120546	389	+	120158	120546	389	ASrna	Toledo-Arana et al. 2009	lmo0111, 	"Toledo-Arana et al. 2009;"				
anti0172-rli23	172186	172485	300	+	172186	172485	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0307	331446	331758	313	-	331446	331758	313	ASrna	Toledo-Arana et al. 2009	lmo0306, 	"Toledo-Arana et al. 2009;"				
anti0330-rli25	357292	357591	300	-	357292	357591	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0360	388392	388640	249	-	388392	388640	249	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti0387	411795	412094	300	-	411795	412094	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0421	441667	441966	300	+	441667	441966	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0424	444354	444653	300	+	444354	444653	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0441	471939	472238	300	+	471939	472238	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0469	506019	506103	85	-	506019	506103	85	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti0470	506669	506968	300	-	506669	506968	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0506-rli30	540470	540769	300	-	540470	540769	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0570	607550	607849	300	-	607550	607849	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0571	608233	608532	300	+	608233	608532	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0605	643800	644099	300	+	643800	644099	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0647-1	689529	689828	300	+	689529	689828	300	ASrna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
anti0647-2	689530	689922	393	+	689530	689922	393	ASrna	Toledo-Arana et al. 2009	lmo0648, 	"Toledo-Arana et al. 2009;Wurtzel et al. 2012;Mraheil et al. 2011;"				
anti0648-1	689932	689996	65	-	689932	689996	65	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti0648-2	690044	690350	307	-	690044	690350	307	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti0648-T1	689825	690364	540	-	689825	690364	540	ASrna	Toledo-Arana et al. 2009	lmo0647-T1, 	"Toledo-Arana et al. 2009;"				
anti0648-T2	689825	689861	37	-	689825	689861	37	ASrna	Toledo-Arana et al. 2009	lmo0647-T2, 	"Toledo-Arana et al. 2009;"				
anti0667	704825	705124	300	-	704825	705124	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0671	707570	707869	300	-	707570	707869	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0675	712148	712447	300	-	712148	712447	300	ASrna	Wurtzel et al. 2012	anti0675-677, 	"Wurtzel et al. 2012;"				
anti0733	762804	763634	831	-	762804	763634	831	ASrna	Toledo-Arana et al. 2009	lmo0734, 	"Toledo-Arana et al. 2009;"				
anti0796	823682	823884	203	+	823682	823884	203	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti0799	827498	827797	300	+	827498	827797	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0811	838544	838843	300	-	838544	838843	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0828-rli35	855168	855467	300	-	855168	855467	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0887	925981	926280	300	-	925981	926280	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0943	979023	979137	115	-	979023	979137	115	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti0945	981201	981315	115	-	981201	981315	115	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti0946-LhrC-5	981367	981666	300	-	981367	981666	300	ASrna	Mraheil et al. 2011	anti0946, anti0946-anti-LhrC-5, 	"Wurtzel et al. 2012;Mraheil et al. 2011;"				
anti0968	1000110	1000409	300	-	1000110	1000409	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti0977-1	1007804	1008103	300	+	1007804	1008103	300	ASrna	Wurtzel et al. 2012	anti0977, 	"Wurtzel et al. 2012;"				
anti0977-2	1008851	1008902	52	+	1008851	1008902	52	ASrna	Mraheil et al. 2011	anti0977, 	"Mraheil et al. 2011;"				
anti1023	1051479	1051778	300	-	1051479	1051778	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1079	1111718	1112017	300	-	1111718	1112017	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1096	1129954	1130253	300	-	1129954	1130253	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1188	1213684	1213983	300	-	1213684	1213983	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1236	1263477	1263776	300	+	1263477	1263776	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1255	1279827	1280126	300	+	1279827	1280126	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1278	1302614	1302913	300	-	1302614	1302913	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1279	1303686	1303985	300	-	1303686	1303985	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1284	1307098	1307397	300	+	1307098	1307397	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1399	1426672	1426971	300	-	1426672	1426971	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1457	1490369	1490461	93	+	1490369	1490461	93	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti1461	1495134	1495433	300	-	1495134	1495433	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1479	1513590	1513639	50	+	1513590	1513639	50	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti1655	1704657	1704956	300	+	1704657	1704956	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1670-1	1724308	1724381	74	-	1724308	1724381	74	ASrna	Wurtzel et al. 2012	anti1670, 	"Mraheil et al. 2011;"				
anti1670-2	1724155	1724454	300	-	1724155	1724454	300	ASrna	Mraheil et al. 2011	anti1670, 	"Wurtzel et al. 2012;"				
anti1677	1732172	1732471	300	-	1732172	1732471	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1707	1769225	1769524	300	-	1769225	1769524	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1708	1770069	1770368	300	+	1770069	1770368	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1734	1800500	1800799	300	+	1800500	1800799	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1749	1819048	1819127	80	-	1819048	1819127	80	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti1751	1820461	1820760	300	+	1820461	1820760	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1758	1829176	1829234	59	+	1829176	1829234	59	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti1777	1854469	1854768	300	+	1854469	1854768	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1816	1890670	1890969	300	-	1890670	1890969	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1830	1905800	1906099	300	-	1905800	1906099	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1846	1923063	1923362	300	-	1923063	1923362	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1909	1982000	1982299	300	-	1982000	1982299	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti1910	1982891	1983142	252	+	1982891	1983142	252	ASrna	Toledo-Arana et al. 2009	lmo1909, 	"Toledo-Arana et al. 2009;"				
anti1967	2041537	2041655	119	-	2041537	2041655	119	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti1974	2047165	2047238	74	+	2047165	2047238	74	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti1980-1	2052533	2052674	142	-	2052533	2052674	142	ASrna	Wurtzel et al. 2012	lmo1981, 	"Toledo-Arana et al. 2009;"				
anti1980-2	2052445	2052744	300	-	2052445	2052744	300	ASrna	Toledo-Arana et al. 2009	anti1980, 	"Wurtzel et al. 2012;"				
anti1981	2052934	2053035	102	+	2052934	2053035	102	ASrna	Toledo-Arana et al. 2009	lmo1980, 	"Toledo-Arana et al. 2009;Wurtzel et al. 2012;"				
anti2044	2128539	2128672	134	-	2128539	2128672	134	ASrna	Toledo-Arana et al. 2009	lmo2045, 	"Toledo-Arana et al. 2009;"				
anti2045	2129095	2129314	220	+	2129095	2129314	220	ASrna	Toledo-Arana et al. 2009	lmo2044, 	"Toledo-Arana et al. 2009;"				
anti2046	2129647	2129946	300	+	2129647	2129946	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2057	2139794	2140093	300	+	2139794	2140093	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2092	2172218	2172517	300	-	2172218	2172517	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2095-1	2174999	2177148	2150	+	2174999	2177148	2150	ASrna	Toledo-Arana et al. 2009	anti2095-RNA2, 	"Toledo-Arana et al. 2009;"				
anti2095-rli65	2174997	2175296	300	+	2174997	2175296	300	ASrna	Toledo-Arana et al. 2009	anti2095, anti2095-RNA1, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
anti2114	2194325	2194624	300	-	2194325	2194624	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2115	2194179	2194478	300	-	2194179	2194478	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2224	2314340	2314423	84	+	2314340	2314423	84	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti2241	2333247	2333546	300	+	2333247	2333546	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2260-1	2347318	2347617	300	+	2347318	2347617	300	ASrna	Wurtzel et al. 2012	anti2260, 	"Wurtzel et al. 2012;"				
anti2260-2	2347675	2348065	391	+	2347675	2348065	391	ASrna	Toledo-Arana et al. 2009	anti2260, lmo2259, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
anti2263	2349756	2350055	300	-	2349756	2350055	300	ASrna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
anti2270	2360255	2360554	300	-	2360255	2360554	300	ASrna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
anti2271	2360820	2360930	111	+	2360820	2360930	111	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti2325-1	2397280	2397544	265	+	2397280	2397544	265	ASrna	Toledo-Arana et al. 2009	anti2325-RNA1, 	"Toledo-Arana et al. 2009;"				
anti2325-2	2397280	2398275	996	+	2397280	2398275	996	ASrna	Toledo-Arana et al. 2009	anti2325-2327, anti2325-RNA2, 	"Toledo-Arana et al. 2009;Wurtzel et al. 2012;"				
anti2394-1	2468058	2468274	217	+	2468058	2468274	217	ASrna	Toledo-Arana et al. 2009	anti2394, anti2394-RNA1, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
anti2394-2	2468058	2468751	694	+	2468058	2468751	694	ASrna	Toledo-Arana et al. 2009	anti2394, anti2394-RNA2, 	"Toledo-Arana et al. 2009;Wurtzel et al. 2012;"				
anti2415	2486369	2486419	51	+	2486369	2486419	51	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti2418	2489486	2489785	300	+	2489486	2489785	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2428	2497360	2497659	300	+	2497360	2497659	300	ASrna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
anti2530	2608022	2608077	56	+	2608022	2608077	56	ASrna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
anti2558	2637381	2637680	300	-	2637381	2637680	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2678	2749549	2749848	300	+	2749549	2749848	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2700	2775493	2775792	300	-	2775493	2775792	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2717	2792160	2792459	300	+	2792160	2792459	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2722	2797765	2798064	300	-	2797765	2798064	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2745	2820427	2820726	300	-	2820427	2820726	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
anti2749	2823812	2824111	300	-	2823812	2824111	300	ASrna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
glmS	756458	756652	195	+	756458	756652	195	CisReg	Rfam	glms, 	"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
lmo0001	318	1673	1356	+	318	1673	1356	ORF	"binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself."	chromosomal replication initiation protein	Chromosomal replication initiator protein DnaA	Operon_001	Replication, recombination and repair	GTG	 
lmo0002	1867	3012	1146	+	1867	3012	1146	ORF	binds the polymerase to DNA and acts as a sliding clamp	DNA polymerase III subunit beta	DNA polymerase III beta subunit (EC 2.7.7.7)	Operon_001	Replication, recombination and repair	ATG	 
lmo0003	3121	4464	1344	+	3121	4464	1344	ORF		hypothetical protein - RAST_Product: FIG00774723: hypothetical protein	FIG00774723: hypothetical protein		Defense/virulence mechanisms	ATG	 
lmo0004	4644	4865	222	+	4644	4865	222	ORF	similar to B. subtilis YaaA protein	hypothetical protein	FIG002958: hypothetical protein	Operon_002	Function unknown	TTG	 
lmo0005	4869	5981	1113	+	4869	5981	1113	ORF	"Required for DNA replication; binds preferentially to single-stranded, linear DNA"	recombination protein F	DNA recombination and repair protein RecF	Operon_002	Replication, recombination and repair	ATG	 
lmo0006	6030	7970	1941	+	6030	7970	1941	ORF		DNA gyrase subunit B	DNA gyrase subunit B (EC 5.99.1.3)	Operon_002	Replication, recombination and repair	ATG	 
lmo0007	8065	10593	2529	+	8065	10593	2529	ORF		DNA gyrase subunit A	DNA gyrase subunit A (EC 5.99.1.3)	Operon_002	Replication, recombination and repair	ATG	 
lmo0008	10728	12242	1515	+	10728	12242	1515	ORF	similar to cardiolipin synthase	hypothetical protein - RAST_Product: Cardiolipin synthetase (EC 2.7.8.-)	Cardiolipin synthetase (EC 2.7.8.-)	Operon_003	Lipid transport and metabolism	ATG	 
lmo0009	12258	12776	519	+	12258	12776	519	ORF	similar to spermidine N1-acetyltransferase	hypothetical protein - RAST_Product: Spermidine N1-acetyltransferase (EC 2.3.1.57)	Spermidine N1-acetyltransferase (EC 2.3.1.57)	Operon_003	Translation	ATG	 
lmo0010	12918	13886	969	+	12918	13886	969	ORF	similar to mevalonate kinase	hypothetical protein - RAST_Product: Mevalonate kinase (EC 2.7.1.36)	Mevalonate kinase (EC 2.7.1.36)	Operon_004	Lipid transport and metabolism	TTG	 
lmo0011	13843	14814	972	+	13843	14814	972	ORF	similar to mevalonate diphosphate decarboxylase	hypothetical protein - RAST_Product: Diphosphomevalonate decarboxylase (EC 4.1.1.33)	Diphosphomevalonate decarboxylase (EC 4.1.1.33)	Operon_004	Lipid transport and metabolism	ATG	 
lmo0012	14795	15874	1080	+	14795	15874	1080	ORF	similar to mevalonate kinases	hypothetical protein - RAST_Product: Phosphomevalonate kinase (EC 2.7.4.2)	Phosphomevalonate kinase (EC 2.7.4.2)	Operon_004	Lipid transport and metabolism	TTG	 
lmo0013	16219	17325	1107	+	16219	17325	1107	ORF		AA3-600 quinol oxidase subunit II	AA3-600 quinol oxidase subunit II	Operon_005	Energy production and conversion	GTG	 
lmo0014	17344	19323	1980	+	17344	19323	1980	ORF		AA3-600 quinol oxidase subunit I	AA3-600 quinol oxidase subunit I	Operon_005	Energy production and conversion	ATG	 
lmo0015	19311	19922	612	+	19311	19922	612	ORF		AA3-600 quinol oxidase subunit III	AA3-600 quinol oxidase subunit IIII	Operon_005	Energy production and conversion	ATG	 
lmo0016	19924	20256	333	+	19924	20256	333	ORF	highly similar to quinol oxidase aa3-600 chain IV	hypothetical protein - RAST_Product: AA3-600 quinol oxidase subunit IV	AA3-600 quinol oxidase subunit IV	Operon_005	Energy production and conversion	ATG	 
lmo0017	20308	21426	1119	-	20308	21426	1119	ORF	similar to Bacillus anthracis CapA protein (polyglutamate capsule biosynthesis)	hypothetical protein - RAST_Product: Capsule biosynthesis protein capA	Capsule biosynthesis protein capA		Cell wall/membrane biogenesis	ATG	 
lmo0018	21652	23085	1434	+	21652	23085	1434	ORF		beta-glucosidase	"Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)"		Carbohydrate transport and metabolism	ATG	 
lmo0019	23132	23953	822	-	23132	23953	822	ORF	lmo0019	hypothetical protein - RAST_Product: FIG00774048: hypothetical protein	FIG00774048: hypothetical protein		Function unknown	ATG	 
lmo0020	24194	24934	741	+	24194	24934	741	ORF	similar to transcriptional regulator (GntR family)	hypothetical protein - RAST_Product: transcriptional regulator, GntR family	transcriptional regulator, GntR family	Operon_006	Transcription	ATG	 
lmo0021	24950	25351	402	+	24950	25351	402	ORF	similar to PTS system, fructose-specific IIA component	hypothetical protein - RAST_Product: PTS system, IIA component	PTS system, IIA component	Operon_006	Carbohydrate transport and metabolism	TTG	 
lmo0022	25351	25839	489	+	25351	25839	489	ORF	similar to PTS system, fructose-specific IIB component	hypothetical protein - RAST_Product: PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69)	PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69)	Operon_006	Carbohydrate transport and metabolism	ATG	 
lmo0023	25862	26665	804	+	25862	26665	804	ORF	similar to PTS system, fructose-specific IIC component	hypothetical protein - RAST_Product: PTS system, mannose-specific IIC component (EC 2.7.1.69)	PTS system, mannose-specific IIC component (EC 2.7.1.69)	Operon_006	Carbohydrate transport and metabolism	ATG	 
lmo0024	26640	27467	828	+	26640	27467	828	ORF	similar to PTS system, mannose-specific IID component	hypothetical protein	PTS system, mannose-specific IID component (EC 2.7.1.69)	Operon_006	Carbohydrate transport and metabolism	ATG	 
lmo0025	27495	28199	705	+	27495	28199	705	ORF	similar to phosphoheptose isomerase	hypothetical protein - RAST_Product: FIG00774489: hypothetical protein	FIG00774489: hypothetical protein	Operon_006	General function prediction only	ATG	 
lmo0026	28254	28895	642	+	28254	28895	642	ORF	similar to E. coli copper homeostasis protein CutC	hypothetical protein	Cytoplasmic copper homeostasis protein cutC	Operon_006	Inorganic ion transport and metabolism	ATG	 
lmo0027	29100	31004	1905	+	29100	31004	1905	ORF	similar to PTS system, beta-glucosides specific enzyme IIABC	hypothetical protein - RAST_Product: PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)	PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0028	31088	31963	876	+	31088	31963	876	ORF	similar to E. coli microcin C7 self-immunity protein (MccF)	hypothetical protein - RAST_Product: Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)	Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)		Defense/virulence mechanisms	ATG	 
lmo0029	32197	32535	339	+	32197	32535	339	ORF	lmo0029	hypothetical protein - RAST_Product: FIG00774140: hypothetical protein	FIG00774140: hypothetical protein		Not in COGs	ATG	 
lmo0030	32571	33380	810	-	32571	33380	810	ORF		hypothetical protein - RAST_Product: hydrolase, haloacid dehalogenase-like family	hydrolase, haloacid dehalogenase-like family	Operon_007	General function prediction only	TTG	 
lmo0031	33397	34452	1056	-	33397	34452	1056	ORF		LacI family transcription regulator	transcriptional regulator LacI family	Operon_007	Transcription	ATG	 
lmo0032	34654	35619	966	+	34654	35619	966	ORF	similar to xylose repressor	hypothetical protein - RAST_Product: Sugar kinase and transcription regulator (EC 2.7.1.-)	Sugar kinase and transcription regulator (EC 2.7.1.-)		"Transcription; Carbohydrate transport and metabolism;"	TTG	 
lmo0033	35616	38018	2403	+	35616	38018	2403	ORF	similar to endoglucanase	hypothetical protein - RAST_Product: glycosyl hydrolase, family 9	glycosyl hydrolase, family 9		Not in COGs	ATG	 
lmo0034	38031	39383	1353	+	38031	39383	1353	ORF	similar to PTS system, cellobiose-specific IIC component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0035	39385	40470	1086	+	39385	40470	1086	ORF	similar to Glucosamine--fructose-6-phosphate aminotransferase (C-terminal domain)	hypothetical protein - RAST_Product: putative glucosamine-fructose-6-phosphate aminotransferase	putative glucosamine-fructose-6-phosphate aminotransferase		Cell wall/membrane biogenesis	ATG	 
lmo0036	40705	41730	1026	+	40705	41730	1026	ORF	"similar to ornithine carbamoyltransferase; catalyzes the formation of putrescine from carbamoyl-putrescine during agmatine degradation"	putrescine carbamoyltransferase	Putrescine carbamoyltransferase (EC 2.1.3.6)		Amino acid transport and metabolism	ATG	 
lmo0037	41803	43188	1386	+	41803	43188	1386	ORF	similar to amino acid transporter	hypothetical protein - RAST_Product: Agmatine/putrescine antiporter, associated with agmatine catabolism	Agmatine/putrescine antiporter, associated with agmatine catabolism		Amino acid transport and metabolism	TTG	 
lmo0038	43175	44266	1092	+	43175	44266	1092	ORF	"Putative agmatine deiminase 1; catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis"	agmatine deiminase	Agmatine deiminase (EC 3.5.3.12)	Operon_008	Amino acid transport and metabolism	ATG	 
lmo0039	44282	45223	942	+	44282	45223	942	ORF	"similar to carbamate kinase; catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP"	carbamate kinase	Carbamate kinase (EC 2.7.2.2)	Operon_008	Amino acid transport and metabolism	ATG	 
lmo0040	45325	46434	1110	+	45325	46434	1110	ORF	"Putative agmatine deiminase 2; catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis"	agmatine deiminase	Agmatine deiminase (EC 3.5.3.12)		Amino acid transport and metabolism	ATG	 
lmo0041	46451	47230	780	+	46451	47230	780	ORF	conserved hypothetical protein, hypothetical regulator	hypothetical protein - RAST_Product: phosphosugar-binding protein	phosphosugar-binding protein		Transcription	ATG	 
lmo0042	47335	47994	660	+	47335	47994	660	ORF	similar to E. coli DedA protein	hypothetical protein - RAST_Product: DedA protein	DedA protein		Function unknown	GTG	 
lmo0043	48074	49306	1233	+	48074	49306	1233	ORF	"similar to arginine deiminase; catalyzes the degradation of arginine to citruline and ammonia"	arginine deiminase	Arginine deiminase (EC 3.5.3.6)		Amino acid transport and metabolism	ATG	 
lmo0044	49585	49878	294	+	49585	49878	294	ORF	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21	30S ribosomal protein S6	SSU ribosomal protein S6p	Operon_009	Translation	ATG	 
lmo0045	49934	50470	537	+	49934	50470	537	ORF	highly similar to single-strand binding protein (SSB)	hypothetical protein - RAST_Product: Single-stranded DNA-binding protein	Single-stranded DNA-binding protein	Operon_009	Replication, recombination and repair	ATG	 
lmo0046	50514	50753	240	+	50514	50753	240	ORF	"binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit"	30S ribosomal protein S18	SSU ribosomal protein S18p	Operon_009	Translation	ATG	 
lmo0047	50907	51518	612	+	50907	51518	612	ORF	lmo0047	hypothetical protein - RAST_Product: lipoprotein, putative	lipoprotein, putative		Function unknown	ATG	 
lmo0048	51775	52389	615	+	51775	52389	615	ORF	"similar to Staphylococcus two-component sensor histidine kinase AgrB; essential for production of a quorum sensing autoinducing peptide"	putative accessory gene regulator protein	Accessory gene regulator protein B (EC 3.4.-.-)	Operon_010	"Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms; Transcription;"	TTG	 
lmo0049	52373	52534	162	+	52373	52534	162	ORF	lmo0049	hypothetical protein - RAST_Product: accessory gene regulator protein D, putative	accessory gene regulator protein D, putative	Operon_010	Not in COGs	ATG	 
lmo0050	52630	53925	1296	+	52630	53925	1296	ORF	similar to sensor histidine kinase (AgrC from Staphylococcus)	hypothetical protein - RAST_Product: Histidine kinase of the competence regulon ComD	Histidine kinase of the competence regulon ComD	Operon_010	Signal transduction mechanisms	ATG	 
lmo0051	53944	54672	729	+	53944	54672	729	ORF	similar to 2-components response regulator protein (AgrA from Staphylococcus)	hypothetical protein - RAST_Product: Response regulator of the competence regulon ComE	Response regulator of the competence regulon ComE	Operon_010	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo0052	54839	56812	1974	+	54839	56812	1974	ORF	highly similar to B. subtilis YybT protein	hypothetical protein - RAST_Product: Phosphoesterase, DHH family protein	Phosphoesterase, DHH family protein	Operon_011	Signal transduction mechanisms	ATG	 
lmo0053	56815	57261	447	+	56815	57261	447	ORF	in Escherichia coli this protein is wrapped around the base of the L1 stalk	50S ribosomal protein L9	LSU ribosomal protein L9p	Operon_011	Translation	ATG	 
lmo0054	57286	58638	1353	+	57286	58638	1353	ORF	"highly similar to replicative DNA helicases; unwinds double stranded DNA"	replicative DNA helicase	Replicative DNA helicase (EC 3.6.1.-) [SA14-24]	Operon_011	Replication, recombination and repair	GTG	 
lmo0055	58897	60189	1293	+	58897	60189	1293	ORF	"highly similar to adenylosuccinate synthetase; catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis"	adenylosuccinate synthetase	Adenylosuccinate synthetase (EC 6.3.4.4)		Nucleotide transport and metabolism	ATG	 
lmo0056	60506	60799	294	+	60506	60799	294	ORF	similar to a small heat shock protein of Clostridium acetobutylicum	hypothetical protein - RAST_Product: ESAT-6/Esx family secreted protein EsxA/YukE	ESAT-6/Esx family secreted protein EsxA/YukE		Function unknown	ATG	 
lmo0057	60948	64154	3207	+	60948	64154	3207	ORF	similar to B. subtilis YueB protein	hypothetical protein - RAST_Product: Putative secretion accessory protein EsaA/YueB	Putative secretion accessory protein EsaA/YueB		Function unknown	ATG	 
lmo0058	64144	64659	516	+	64144	64659	516	ORF	lmo0058	hypothetical protein - RAST_Product: Putative secretion system component EssA	Putative secretion system component EssA		Not in COGs	ATG	 
lmo0059	64677	64928	252	+	64677	64928	252	ORF	similar to B. subtilis YukD protein	hypothetical protein - RAST_Product: Putative secretion accessory protein EsaB/YukD	Putative secretion accessory protein EsaB/YukD		Function unknown	TTG	 
lmo0060	64950	66146	1197	+	64950	66146	1197	ORF	similar to B. subtilis YukC protein	hypothetical protein - RAST_Product: Putative secretion system component EssB/YukC	Putative secretion system component EssB/YukC		Function unknown	ATG	 
lmo0061	66160	70656	4497	+	66160	70656	4497	ORF	highly similar to B. subtilis YukA protein	hypothetical protein - RAST_Product: FtsK/SpoIIIE family protein, putative secretion system component EssC/YukA	FtsK/SpoIIIE family protein, putative secretion system component EssC/YukA		Cell cycle control, mitosis and meiosis	ATG	 
lmo0062	70676	71071	396	+	70676	71071	396	ORF	lmo0062	hypothetical protein - RAST_Product: Putative EsaC protein analog (Listeria type 1)	Putative EsaC protein analog (Listeria type 1)		Not in COGs	ATG	 
lmo0063	71064	71363	300	+	71064	71363	300	ORF	lmo0063	hypothetical protein - RAST_Product: ESAT-6/Esx family secreted protein EsxB	ESAT-6/Esx family secreted protein EsxB		Not in COGs	ATG	 
lmo0064	71360	72061	702	+	71360	72061	702	ORF	lmo0064	hypothetical protein - RAST_Product: SAV0291 homolog within ESAT-6 gene cluster	SAV0291 homolog within ESAT-6 gene cluster		Not in COGs	ATG	 
lmo0065	72062	72394	333	+	72062	72394	333	ORF	lmo0065	hypothetical protein - RAST_Product: Lmo0065 homolog within ESAT-6 gene cluster	Lmo0065 homolog within ESAT-6 gene cluster		Not in COGs	ATG	 
lmo0066	72408	74222	1815	+	72408	74222	1815	ORF	similar to toxin components	hypothetical protein - RAST_Product: Lmo0066 homolog within ESAT-6 gene cluster, similarity to ADP-ribosylating toxins	Lmo0066 homolog within ESAT-6 gene cluster, similarity to ADP-ribosylating toxins		Signal transduction mechanisms	ATG	 
lmo0067	74239	75228	990	+	74239	75228	990	ORF	similar to dinitrogenase reductase ADP-ribosylation system	hypothetical protein - RAST_Product: ADP-ribosylglycohydrolase	ADP-ribosylglycohydrolase	Operon_012	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0068	75342	75665	324	+	75342	75665	324	ORF	lmo0068	hypothetical protein - RAST_Product: FIG00774538: hypothetical protein	FIG00774538: hypothetical protein	Operon_012	Not in COGs	ATG	 
lmo0069	75832	76125	294	+	75832	76125	294	ORF	lmo0069	hypothetical protein	Lmo0069 homolog within ESAT-6 gene cluster	Operon_012	Not in COGs	ATG	 
lmo0070	76262	76984	723	+	76262	76984	723	ORF	lmo0070	hypothetical protein - RAST_Product: FIG00775182: hypothetical protein	FIG00775182: hypothetical protein	Operon_013	Not in COGs	GTG	 
lmo0071	77149	77406	258	+	77149	77406	258	ORF	lmo0071	hypothetical protein - RAST_Product: FIG00775814: hypothetical protein	FIG00775814: hypothetical protein	Operon_013	Not in COGs	TTG	 
lmo0072	77863	78066	204	+	77863	78066	204	ORF		hypothetical protein		Operon_013	Not in COGs	GTG	 
lmo0073	78090	78374	285	+	78090	78374	285	ORF	lmo0073	hypothetical protein - RAST_Product: FIG00775054: hypothetical protein	FIG00775054: hypothetical protein	Operon_013	Not in COGs	ATG	 
lmo0074	78362	78811	450	+	78362	78811	450	ORF	lmo0074	hypothetical protein	FIG00774981: hypothetical protein	Operon_013	Not in COGs	ATG	 
lmo0075	79047	79820	774	+	79047	79820	774	ORF	similar to carboxyphosphonoenolpyruvate phosphonomutase	hypothetical protein - RAST_Product: Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)	Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)		Carbohydrate transport and metabolism	ATG	 
lmo0076	79817	80869	1053	+	79817	80869	1053	ORF	similar to E. coli Ada protein (O6-methylguanine-DNA methyltransferase)	hypothetical protein - RAST_Product: ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)		"Replication, recombination and repair; Nucleotide transport and metabolism;"	GTG	 
lmo0077	80892	81530	639	-	80892	81530	639	ORF		hypothetical protein - RAST_Product: FIG00774172: hypothetical protein	FIG00774172: hypothetical protein		Function unknown	ATG	 
lmo0078	81661	82617	957	+	81661	82617	957	ORF	similar to phosphoglycerate dehydrogenase	hypothetical protein - RAST_Product: Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81)	Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81)		"Energy production and conversion; Coenzyme transport and metabolism; General function prediction only;"	ATG	 
lmo0079	82959	84437	1479	+	82959	84437	1479	ORF	lmo0079	hypothetical protein - RAST_Product: FIG00774616: hypothetical protein	FIG00774616: hypothetical protein	Operon_014	Posttranslational modification, protein turnover, chaperones	GTG	 
lmo0080	84451	84849	399	+	84451	84849	399	ORF	lmo0080	hypothetical protein - RAST_Product: Lmo0080 protein	Lmo0080 protein	Operon_014	Not in COGs	ATG	 
lmo0081	85025	85627	603	+	85025	85627	603	ORF	lmo0081	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_014	Not in COGs	ATG	 
lmo0082	85902	86228	327	+	85902	86228	327	ORF	lmo0082	hypothetical protein		Operon_014	Not in COGs	ATG	 
lmo0083	86323	86691	369	-	86323	86691	369	ORF	similar to transcription regulator (merR family)	hypothetical protein - RAST_Product: transcriptional regulator, MerR family	transcriptional regulator, MerR family	Operon_015	Transcription	ATG	 
lmo0084	86747	87730	984	-	86747	87730	984	ORF	similar to oxidoreductases	hypothetical protein - RAST_Product: Aldo-keto reductase	Aldo-keto reductase	Operon_015	Energy production and conversion	ATG	 
lmo0085	88121	88810	690	+	88121	88810	690	ORF	lmo0085	hypothetical protein - RAST_Product: FIG00774847: hypothetical protein	FIG00774847: hypothetical protein		Not in COGs	ATG	 
lmo0086	88888	94767	5880	+	88888	94767	5880	ORF	lmo0086	hypothetical protein - RAST_Product: FIG00774455: hypothetical protein	FIG00774455: hypothetical protein		Not in COGs	TTG	 
lmo0087	94764	97070	2307	+	94764	97070	2307	ORF	lmo0087	hypothetical protein - RAST_Product: FIG00774343: hypothetical protein	FIG00774343: hypothetical protein		Not in COGs	ATG	 
lmo0088	97127	97369	243	+	97127	97369	243	ORF	similar to ATP synthase C chain	hypothetical protein - RAST_Product: ATP synthase C chain (EC 3.6.3.14)	ATP synthase C chain (EC 3.6.3.14)		Energy production and conversion	ATG	 
lmo0089	97381	98412	1032	+	97381	98412	1032	ORF	weakly similar to ATP synthase delta chain	hypothetical protein - RAST_Product: ATP synthase F1, delta subunit	ATP synthase F1, delta subunit		Energy production and conversion	ATG	 
lmo0090	98409	99905	1497	+	98409	99905	1497	ORF	"similar to ATP synthase alpha chain; produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit"	F0F1 ATP synthase subunit alpha	ATP synthase alpha chain (EC 3.6.3.14)		Energy production and conversion	TTG	 
lmo0091	99902	100771	870	+	99902	100771	870	ORF	similar to ATP synthase gamma chain	hypothetical protein - RAST_Product: ATP synthase gamma chain (EC 3.6.3.14)	ATP synthase gamma chain (EC 3.6.3.14)		Energy production and conversion	TTG	 
lmo0092	100772	102142	1371	+	100772	102142	1371	ORF	"similar to ATP synthase beta chain; produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit"	F0F1 ATP synthase subunit beta	ATP synthase beta chain (EC 3.6.3.14)		Energy production and conversion	ATG	 
lmo0093	102155	102478	324	+	102155	102478	324	ORF	similar to ATP synthase epsilon chain	hypothetical protein - RAST_Product: ATP synthase F1, epsilon subunit	ATP synthase F1, epsilon subunit		Energy production and conversion	ATG	 
lmo0094	102468	103028	561	+	102468	103028	561	ORF	lmo0094	hypothetical protein - RAST_Product: FIG00774358: hypothetical protein	FIG00774358: hypothetical protein		Not in COGs	ATG	 
lmo0095	103204	103836	633	+	103204	103836	633	ORF	lmo0095	hypothetical protein - RAST_Product: FIG00774239: hypothetical protein	FIG00774239: hypothetical protein		Not in COGs	ATG	 
lmo0096	104134	105099	966	+	104134	105099	966	ORF	similar to PTS system mannose-specific, factor IIAB	hypothetical protein - RAST_Product: PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69)	PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69)	Operon_016	Carbohydrate transport and metabolism	ATG	 
lmo0097	105123	105929	807	+	105123	105929	807	ORF	similar to PTS system mannose-specific, factor IIC	hypothetical protein - RAST_Product: PTS system, mannose-specific IIC component (EC 2.7.1.69)	PTS system, mannose-specific IIC component (EC 2.7.1.69)	Operon_016	Carbohydrate transport and metabolism	ATG	 
lmo0098	105951	106862	912	+	105951	106862	912	ORF	similar to PTS system mannose-specific, factor IID	hypothetical protein - RAST_Product: PTS system, mannose-specific IID component (EC 2.7.1.69)	PTS system, mannose-specific IID component (EC 2.7.1.69)	Operon_016	Carbohydrate transport and metabolism	ATG	 
lmo0099	106988	107377	390	+	106988	107377	390	ORF	lmo0099	hypothetical protein - RAST_Product: Putative regulator of the mannose operon, ManO	Putative regulator of the mannose operon, ManO		Function unknown	TTG	 
lmo0100	107499	107849	351	+	107499	107849	351	ORF	lmo0100	hypothetical protein - RAST_Product: FIG00774211: hypothetical protein	FIG00774211: hypothetical protein		Function unknown	ATG	 
lmo0101	107915	108208	294	-	107915	108208	294	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: transcriptional regulator, ArsR family	transcriptional regulator, ArsR family		Transcription	ATG	 
lmo0102	108320	108610	291	+	108320	108610	291	ORF	lmo0102	hypothetical protein - RAST_Product: FIG00774166: hypothetical protein	FIG00774166: hypothetical protein		Function unknown	ATG	 
lmo0103	108624	109256	633	+	108624	109256	633	ORF	similar to NADH oxidase	hypothetical protein - RAST_Product: NADH dehydrogenase (EC 1.6.99.3)	NADH dehydrogenase (EC 1.6.99.3)		Energy production and conversion	ATG	 
lmo0104	109349	109720	372	+	109349	109720	372	ORF	lmo0104	hypothetical protein - RAST_Product: FIG00774471: hypothetical protein	FIG00774471: hypothetical protein		Not in COGs	GTG	 
lmo0105	110013	112283	2271	+	110013	112283	2271	ORF	highly similar to chitinase B	hypothetical protein	Chitinase (EC 3.2.1.14)		"Carbohydrate transport and metabolism; General function prediction only;"	ATG	 
lmo0106	112386	113288	903	+	112386	113288	903	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Sugar kinase and transcription regulator (EC 2.7.1.-)	Sugar kinase and transcription regulator (EC 2.7.1.-)		"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0107	113313	115094	1782	-	113313	115094	1782	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Lipid A export ATP-binding/permease protein MsbA	Lipid A export ATP-binding/permease protein MsbA	Operon_017	Defense/virulence mechanisms	ATG	 
lmo0108	115087	116829	1743	-	115087	116829	1743	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Lipid A export ATP-binding/permease protein MsbA	Lipid A export ATP-binding/permease protein MsbA	Operon_017	Defense/virulence mechanisms	ATG	 
lmo0109	116972	117805	834	+	116972	117805	834	ORF	similar to transcriptional regulatory proteins, AraC family	hypothetical protein - RAST_Product: Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Operon_018	Transcription	ATG	 
lmo0110	117841	118956	1116	+	117841	118956	1116	ORF	similar to lipase	hypothetical protein - RAST_Product: Esterase/lipase	Esterase/lipase	Operon_018	Lipid transport and metabolism	ATG	 
lmo0111	119063	119770	708	+	119063	119770	708	ORF	lmo0111	hypothetical protein	FIG00774534: hypothetical protein		Signal transduction mechanisms	ATG	 
lmo0112	119740	120435	696	-	119740	120435	696	ORF	weakly similar to transcription regulators, Fnr/Crp family	hypothetical protein - RAST_Product: FIG00774366: hypothetical protein	FIG00774366: hypothetical protein		Not in COGs	ATG	 
lmo0113	120654	121106	453	-	120654	121106	453	lma operon	similar to protein gp35 from Bacteriophage A118	hypothetical protein - RAST_Product: Protein gp35 [Bacteriophage A118]	Protein gp35 [Bacteriophage A118]	Operon_019	Not in COGs	TTG	 
lmo0114	121112	121447	336	-	121112	121447	336	lma operon	similar to putative repressor C1 from lactococcal bacteriophage Tuc2009	hypothetical protein - RAST_Product: Phage repressor	Phage repressor	Operon_019	Transcription	ATG	 
lmo0115	121664	122092	429	+	121664	122092	429	lma operon	similar to Antigen D	hypothetical protein - RAST_Product: Listeria protein LmaD, associated with virulence	Listeria protein LmaD, associated with virulence	Operon_020	Not in COGs	ATG	 
lmo0116	122104	122520	417	+	122104	122520	417	lma operon	similar to Antigen C	hypothetical protein - RAST_Product: LmaC, associated with virulence in Listeria	LmaC, associated with virulence in Listeria	Operon_020	Not in COGs	ATG	 
lmo0117	122798	123187	390	+	122798	123187	390	lma operon		antigen B	Listeria protein LmaB, associated with virulence	Operon_020	Not in COGs	GTG	 
lmo0118	123200	123712	513	+	123200	123712	513	lma operon		antigen A	hypothetical protein	Operon_020	Function unknown	ATG	 
lmo0119	123760	124062	303	+	123760	124062	303	lma operon	lmo0119	hypothetical protein - RAST_Product: FIG00774706: hypothetical protein	FIG00774706: hypothetical protein	Operon_020	Not in COGs	ATG	 
lmo0120	124104	124508	405	+	124104	124508	405	lma operon	lmo0120	hypothetical protein - RAST_Product: FIG00774110: hypothetical protein	FIG00774110: hypothetical protein	Operon_020	Not in COGs	GTG	 
lmo0121	124495	126363	1869	+	124495	126363	1869	lma operon	similar to bacteriophage minor tail proteins	hypothetical protein - RAST_Product: Phage tail length tape-measure protein	Phage tail length tape-measure protein	Operon_020	Function unknown	ATG	 
lmo0122	126360	127178	819	+	126360	127178	819	lma operon	similar to phage proteins	hypothetical protein - RAST_Product: Phage tail fiber	Phage tail fiber	Operon_020	Not in COGs	ATG	 
lmo0123	127188	128324	1137	+	127188	128324	1137	lma operon	similar to protein gp18 from Bacteriophage A118	hypothetical protein - RAST_Product: Putative tail or base plate protein gp18 [Bacteriophage A118]	Putative tail or base plate protein gp18 [Bacteriophage A118]	Operon_020	Not in COGs	ATG	 
lmo0124	128314	128613	300	+	128314	128613	300	ORF	lmo0124	hypothetical protein - RAST_Product: FIG00774673: hypothetical protein	FIG00774673: hypothetical protein	Operon_020	Not in COGs	ATG	 
lmo0125	128628	129203	576	+	128628	129203	576	ORF	lmo0125	hypothetical protein - RAST_Product: FIG00774093: hypothetical protein	FIG00774093: hypothetical protein	Operon_020	Not in COGs	ATG	 
lmo0126	129218	129697	480	+	129218	129697	480	ORF	lmo0126	hypothetical protein - RAST_Product: FIG00774250: hypothetical protein	FIG00774250: hypothetical protein	Operon_020	Not in COGs	ATG	 
lmo0127	129694	130230	537	+	129694	130230	537	ORF	weakly similar to protein gp20 from Bacteriophage A118	hypothetical protein - RAST_Product: FIG00774804: hypothetical protein	FIG00774804: hypothetical protein	Operon_020	Not in COGs	ATG	 
lmo0128	130249	130671	423	+	130249	130671	423	ORF	similar to a protein from Bacteriophage phi-105 (ORF 45)	hypothetical protein - RAST_Product: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	Operon_020	General function prediction only	ATG	 
lmo0129	130652	131380	729	+	130652	131380	729	ORF	similar to autolysin: N-acetylmuramoyl-L-alanine amidase	hypothetical protein - RAST_Product: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	Operon_020	Cell wall/membrane biogenesis	ATG	 
lmo0130	131419	133773	2355	-	131419	133773	2355	ORF	similar to 5'-nucleotidase, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein	5'-nucleotidase (EC 3.1.3.5)		Nucleotide transport and metabolism	GTG	 
lmo0131	133961	134710	750	+	133961	134710	750	ORF		hypothetical protein - RAST_Product: FIG00774523: hypothetical protein	FIG00774523: hypothetical protein		Signal transduction mechanisms	ATG	 
lmo0132	134782	136290	1509	-	134782	136290	1509	ORF	"similar to inosine monophosphate dehydrogenase; catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate"	inosine 5-monophosphate dehydrogenase	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)		"Nucleotide transport and metabolism; General function prediction only;"	ATG	 
lmo0133	136469	136702	234	+	136469	136702	234	ORF	similar to E. coli YjdI protein	hypothetical protein - RAST_Product: FIG00774781: hypothetical protein	FIG00774781: hypothetical protein	Operon_021	Function unknown	ATG	 
lmo0134	136714	136992	279	+	136714	136992	279	ORF	similar to E. coli YjdJ protein	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_021	General function prediction only	ATG	 
lmo0135	137323	138897	1575	+	137323	138897	1575	ORF	similar to oligopeptide ABC transport system substrate-binding proteins	hypothetical protein - RAST_Product: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Operon_022	Amino acid transport and metabolism	ATG	 
lmo0136	138999	139949	951	+	138999	139949	951	ORF	similar to oligopeptide ABC transporter, permease protein	hypothetical protein - RAST_Product: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Operon_022	"Amino acid transport and metabolism; Inorganic ion transport and metabolism;"	ATG	 
lmo0137	139960	140853	894	+	139960	140853	894	ORF	similar to oligopeptide ABC transporter, permease protein	hypothetical protein	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Operon_022	"Amino acid transport and metabolism; Inorganic ion transport and metabolism;"	ATG	 
lmo0138	141052	141336	285	+	141052	141336	285	ORF	lmo0138	hypothetical protein - RAST_Product: FIG00774141: hypothetical protein	FIG00774141: hypothetical protein		Not in COGs	ATG	 
lmo0139	141337	141705	369	+	141337	141705	369	ORF	lmo0139	hypothetical protein - RAST_Product: FIG00774625: hypothetical protein	FIG00774625: hypothetical protein		Not in COGs	ATG	 
lmo0140	141618	143006	1389	+	141618	143006	1389	ORF	lmo0140	hypothetical protein	FIG00774569: hypothetical protein		Not in COGs	ATG	 
lmo0141	143016	143258	243	+	143016	143258	243	ORF	lmo0141	hypothetical protein - RAST_Product: FIG00774643: hypothetical protein	FIG00774643: hypothetical protein		Not in COGs	ATG	 
lmo0142	143366	143722	357	+	143366	143722	357	ORF	lmo0142	hypothetical protein - RAST_Product: FIG00774858: hypothetical protein	FIG00774858: hypothetical protein		Not in COGs	ATG	 
lmo0143	144097	144273	177	+	144097	144273	177	ORF	lmo0143	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0144	144397	144840	444	+	144397	144840	444	ORF	lmo0144	hypothetical protein - RAST_Product: FIG00775328: hypothetical protein	FIG00775328: hypothetical protein		Not in COGs	ATG	 
lmo0145	145085	145171	87	+	145085	145171	87	ORF		hypothetical protein			Not in COGs	ATG	 
lmo0146	145354	145560	207	+	145354	145560	207	ORF		hypothetical protein - RAST_Product: FIG00774118: hypothetical protein	FIG00774118: hypothetical protein		Not in COGs	GTG	 
lmo0147	145869	146306	438	+	145869	146306	438	ORF	lmo0147	hypothetical protein - RAST_Product: FIG00774827: hypothetical protein	FIG00774827: hypothetical protein		Not in COGs	TTG	 
lmo0148	146306	146656	351	+	146306	146656	351	ORF	lmo0148	hypothetical protein - RAST_Product: FIG00774858: hypothetical protein	FIG00774858: hypothetical protein		Not in COGs	ATG	 
lmo0149	146764	147381	618	+	146764	147381	618	ORF	lmo0149	hypothetical protein	FIG00774748: hypothetical protein		Not in COGs	ATG	 
lmo0150	147399	147764	366	+	147399	147764	366	ORF	lmo0150	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0151	147884	148291	408	+	147884	148291	408	ORF	lmo0151	hypothetical protein - RAST_Product: FIG00775174: hypothetical protein	FIG00775174: hypothetical protein		Not in COGs	TTG	 
lmo0152	148354	150009	1656	-	148354	150009	1656	ORF	similar to oligopeptide ABC transporter-binding protein	hypothetical protein - RAST_Product: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)		Amino acid transport and metabolism	ATG	 
lmo0153	150232	151173	942	+	150232	151173	942	ORF	similar to a probable high-affinity zinc ABC transporter (Zn(II)-binding lipoprotein)	hypothetical protein - RAST_Product: Zinc ABC transporter, periplasmic-binding protein ZnuA	Zinc ABC transporter, periplasmic-binding protein ZnuA		Inorganic ion transport and metabolism	ATG	 
lmo0154	151186	151890	705	+	151186	151890	705	ORF	similar to high-affinity zinc ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Zinc ABC transporter, ATP-binding protein ZnuC	Zinc ABC transporter, ATP-binding protein ZnuC		Inorganic ion transport and metabolism	ATG	 
lmo0155	151839	152645	807	+	151839	152645	807	ORF	similar to high-affinity zinc ABC transporter (membrane protein)	hypothetical protein	Zinc ABC transporter, inner membrane permease protein ZnuB		Inorganic ion transport and metabolism	ATG	 
lmo0156	152648	153328	681	-	152648	153328	681	ORF	lmo0156	hypothetical protein - RAST_Product: cyclic nucleotide-binding protein	cyclic nucleotide-binding protein		Signal transduction mechanisms	ATG	 
lmo0157	153608	155947	2340	+	153608	155947	2340	ORF	similar to ATP dependent helicase	hypothetical protein - RAST_Product: DinG family ATP-dependent helicase CPE1197	DinG family ATP-dependent helicase CPE1197	Operon_023	"Transcription; Replication, recombination and repair;"	ATG	 
lmo0158	155993	156805	813	+	155993	156805	813	ORF		hypothetical protein - RAST_Product: Phosphatase YidA	Phosphatase YidA	Operon_023	General function prediction only	ATG	 
lmo0159	157089	159470	2382	+	157089	159470	2382	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo0159 homolog		Cell wall/membrane biogenesis	ATG	 
lmo0160	159663	161378	1716	+	159663	161378	1716	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo0160 homolog		Cell wall/membrane biogenesis	ATG	 
lmo0161	161420	162250	831	-	161420	162250	831	ORF	lmo0161	hypothetical protein - RAST_Product: STAS domain protein	STAS domain protein		Signal transduction mechanisms	ATG	 
lmo0162	162467	163459	993	+	162467	163459	993	ORF	"similar to B. subtilis DNA polymerase III (delta' subunit); catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA"	DNA polymerase III subunit delta'	DNA polymerase III delta prime subunit (EC 2.7.7.7)	Operon_024	Replication, recombination and repair	GTG	 
lmo0163	163465	164298	834	+	163465	164298	834	ORF	lmo0163	hypothetical protein - RAST_Product: Signal peptidase-like protein	Signal peptidase-like protein	Operon_024	Function unknown	ATG	 
lmo0164	164309	164698	390	+	164309	164698	390	ORF	"similar to B. subtilis YabA protein; in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA"	DNA replication intiation control protein YabA	DNA replication intiation control protein YabA	Operon_024	Function unknown	TTG	 
lmo0165	164756	165508	753	+	164756	165508	753	ORF		hypothetical protein	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	Operon_024	General function prediction only	TTG	 
lmo0166	165492	165764	273	+	165492	165764	273	ORF	similar to B. subtilis YazA protein	GIY-YIG nuclease superfamily protein	COG2827: putative endonuclease containing a URI domain	Operon_024	Replication, recombination and repair	ATG	 
lmo0167	165761	166642	882	+	165761	166642	882	ORF		hypothetical protein - RAST_Product: rRNA small subunit methyltransferase I	rRNA small subunit methyltransferase I	Operon_024	General function prediction only	GTG	 
lmo0168	166687	166971	285	-	166687	166971	285	ORF	similar to B. subtilis transcription regulatory protein AbrB	hypothetical protein - RAST_Product: Transition state regulatory protein AbrB	Transition state regulatory protein AbrB		Transcription	ATG	 
lmo0169	167086	167943	858	+	167086	167943	858	ORF	similar to a glucose uptake protein	hypothetical protein - RAST_Product: glucose uptake protein	glucose uptake protein	Operon_025	Carbohydrate transport and metabolism	ATG	 
lmo0170	168005	169270	1266	+	168005	169270	1266	ORF	lmo0170	hypothetical protein	putative exported protein	Operon_025	Function unknown	TTG	 
lmo0171	169510	172008	2499	+	169510	172008	2499	ORF	similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein	Internalin-like protein (LPXTG motif) Lmo0171 homolog		Function unknown	ATG	 
lmo0172	172072	172458	387	-	172072	172458	387	ORF		Pseudo-gene or RefSeq provisional			Not in COGs	TGG	 
lmo0173	172410	172931	522	-	172410	172931	522	ORF		Pseudo-gene or RefSeq provisional			Not in COGs	AAA	 
lmo0174	172903	173208	306	-	172903	173208	306	ORF	similar to transposase	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0175	173309	174556	1248	-	173309	174556	1248	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo0175 homolog		Not in COGs	ATG	 
lmo0176	174834	175694	861	+	174834	175694	861	ORF	similar to glucose uptake protein	hypothetical protein - RAST_Product: glucose uptake protein	glucose uptake protein	Operon_026	Carbohydrate transport and metabolism	TTG	 
lmo0177	175766	177760	1995	+	175766	177760	1995	ORF	"methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content"	methionyl-tRNA synthetase	Methionyl-tRNA synthetase (EC 6.1.1.10)	Operon_026	"Translation; General function prediction only;"	TTG	 
lmo0178	177924	179138	1215	+	177924	179138	1215	ORF	similar to xylose repressor	hypothetical protein - RAST_Product: Putative ROK-family transcriptional regulator	Putative ROK-family transcriptional regulator		"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0179	179174	180052	879	+	179174	180052	879	ORF	similar to sugar ABC transporters, permease proteins	hypothetical protein - RAST_Product: N-Acetyl-D-glucosamine ABC transport system, permease protein 1	N-Acetyl-D-glucosamine ABC transport system, permease protein 1		Carbohydrate transport and metabolism	ATG	 
lmo0180	180052	180900	849	+	180052	180900	849	ORF	similar to sugar ABC transporter, permease protein	hypothetical protein - RAST_Product: N-Acetyl-D-glucosamine ABC transport system, permease protein 2	N-Acetyl-D-glucosamine ABC transport system, permease protein 2		Carbohydrate transport and metabolism	ATG	 
lmo0181	180928	182184	1257	+	180928	182184	1257	ORF	similar to sugar ABC transporter, sugar-binding protein	hypothetical protein - RAST_Product: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein	N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein		Carbohydrate transport and metabolism	ATG	 
lmo0182	182267	185569	3303	+	182267	185569	3303	ORF	similar to alpha-xylosidase and alpha-glucosidase	hypothetical protein - RAST_Product: glycosyl hydrolase, family 31	glycosyl hydrolase, family 31		Carbohydrate transport and metabolism	ATG	 
lmo0183	185572	187863	2292	+	185572	187863	2292	ORF	similar to alpha-glucosidase	hypothetical protein - RAST_Product: Alpha-glucosidase (EC 3.2.1.20)	Alpha-glucosidase (EC 3.2.1.20)		Carbohydrate transport and metabolism	ATG	 
lmo0184	187867	189528	1662	+	187867	189528	1662	ORF	similar to oligo-1,6-glucosidase	hypothetical protein - RAST_Product: Oligo-1,6-glucosidase (EC 3.2.1.10)	Oligo-1,6-glucosidase (EC 3.2.1.10)		Carbohydrate transport and metabolism	ATG	 
lmo0185	189625	190398	774	+	189625	190398	774	ORF		hypothetical protein - RAST_Product: Putative deoxyribonuclease YcfH	Putative deoxyribonuclease YcfH		Replication, recombination and repair	TTG	 
lmo0186	190690	191916	1227	+	190690	191916	1227	ORF	similar to B. subtilis YabE protein	hypothetical protein - RAST_Product: Cell wall-binding protein	Cell wall-binding protein		Function unknown	ATG	 
lmo0187	192018	192593	576	+	192018	192593	576	ORF	similar to B. subtilis YabF protein	hypothetical protein - RAST_Product: Ribonuclease M5 (EC 3.1.26.8)	Ribonuclease M5 (EC 3.1.26.8)	Operon_027	Replication, recombination and repair	ATG	 
lmo01876	1950883	1951323	441	-	1950883	1951323	441	ORF		Pseudo-gene or RefSeq provisional			Not in COGs	AAA	 
lmo0188	192586	193473	888	+	192586	193473	888	ORF	"catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin"	dimethyladenosine transferase	Dimethyladenosine transferase (EC 2.1.1.-)	Operon_027	Translation	ATG	 
lmo0189	193593	193850	258	+	193593	193850	258	ORF	highly similar to B. subtilis Veg protein	hypothetical protein - RAST_Product: Veg protein	Veg protein		Function unknown	ATG	 
lmo0190	193989	194870	882	+	193989	194870	882	ORF	"similar to B. subtilis YabH protein; An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis"	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	Operon_028	Lipid transport and metabolism	ATG	 
lmo0191	194892	195629	738	+	194892	195629	738	ORF	similar to a putative phospho-beta-glucosidase	hypothetical protein - RAST_Product: Cellobiose phosphotransferase system YdjC-like protein	Cellobiose phosphotransferase system YdjC-like protein	Operon_028	Function unknown	ATG	 
lmo0192	195793	196611	819	+	195793	196611	819	ORF	similar to PurR, transcription repressor of purine operon of B. subtilis	pur operon repressor	PurR: transcription regulator associated with purine metabolism		Nucleotide transport and metabolism	ATG	 
lmo0193	196786	197463	678	+	196786	197463	678	ORF	lmo0193	hypothetical protein - RAST_Product: possible membrane fusion protein	possible membrane fusion protein	Operon_029	Cell wall/membrane biogenesis	ATG	 
lmo0194	197512	198204	693	+	197512	198204	693	ORF		ABC transporter, ATP-binding protein	ABC transporter ATP-binding protein YvcR	Operon_029	Defense/virulence mechanisms	ATG	 
lmo0195	198201	199409	1209	+	198201	199409	1209	ORF	similar to membrane protein (putative ABC transporter component)	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_029	Defense/virulence mechanisms	ATG	 
lmo0196	200094	200402	309	+	200094	200402	309	ORF	"similar to B. subtilis SpoVG protein; stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus"	regulatory protein SpoVG	Protein of unknown function identified by role in sporulation (SpoVG)	Operon_030	Cell wall/membrane biogenesis	ATG	 
lmo0197	200522	200830	309	+	200522	200830	309	ORF	"similar to B. subtilis SpoVG protein; stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus"	regulatory protein SpoVG	Protein of unknown function identified by role in sporulation (SpoVG)	Operon_030	Cell wall/membrane biogenesis	ATG	 
lmo0198	201217	202590	1374	+	201217	202590	1374	ORF	"highly similar to UDP-N-acetylglucosamine pyrophosphorylase; forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis"	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	Operon_031	Cell wall/membrane biogenesis	ATG	 
lmo0199	202641	203597	957	+	202641	203597	957	ORF	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP	ribose-phosphate pyrophosphokinase	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	Operon_031	"Amino acid transport and metabolism; Nucleotide transport and metabolism;"	ATG	 
lmo0200	203640	204353	714	-	203640	204353	714	ORF		listeriolysin positive regulatory protein	Virulence regulatory factor PrfA / Transcriptional regulator, CrP/Fnr family		Transcription	ATG	 
lmo0201	204624	205577	954	-	204624	205577	954	ORF		phosphatidylinositol-specific phospholipase c	Phosphatidylinositol-specific phospholipase C (EC 4.6.1.13)		Defense/virulence mechanisms	TTG	 
lmo0202	205819	207408	1590	+	205819	207408	1590	ORF		listeriolysin O precursor	Thiol-activated cytolysin		Defense/virulence mechanisms	ATG	 
lmo0203	207739	209271	1533	+	207739	209271	1533	ORF		Zinc metalloproteinase precursor	Zinc metalloproteinase precursor (EC 3.4.24.29)	Operon_033	Amino acid transport and metabolism	ATG	 
lmo0204	209470	211389	1920	+	209470	211389	1920	ORF		actin-assembly inducing protein precursor	Actin-assembly inducing protein ActA precursor	Operon_033	Cell motility	GTG	 
lmo0205	211425	212294	870	+	211425	212294	870	ORF		phospholipase C	Broad-substrate range phospholipase C (EC 3.1.4.3)	Operon_033	Defense/virulence mechanisms	ATG	 
lmo0206	212366	212689	324	+	212366	212689	324	ORF	lmo0206	hypothetical protein	Distant similarity with viral glycoprotein gp160 of HIV type 1	Operon_033	Not in COGs	ATG	 
lmo0207	212824	213285	462	+	212824	213285	462	ORF	Uncharacterized lipoprotein Lmo0207 precursor.	hypothetical protein - RAST_Product: hypothetical lipoprotein	hypothetical lipoprotein	Operon_033	Function unknown	ATG	 
lmo0208	213336	213668	333	-	213336	213668	333	ORF		hypothetical protein - RAST_Product: virulence cluster protein B VclB	virulence cluster protein B VclB		Function unknown	ATG	 
lmo0209	213735	214409	675	-	213735	214409	675	ORF	lmo0209	hypothetical protein - RAST_Product: virulence cluster protein A VclA	virulence cluster protein A VclA		Not in COGs	ATG	 
lmo0210	214486	215427	942	-	214486	215427	942	ORF	"similar to L-lactate dehydrogenase; Converts (S)-lactate and NAD(+) to pyruvate and NADH"	L-lactate dehydrogenase	L-lactate dehydrogenase (EC 1.1.1.27)		Energy production and conversion	ATG	 
lmo0211	215721	216344	624	+	215721	216344	624	ORF	"similar to B. subtilis general stress protein; the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response"	50S ribosomal protein L25/general stress protein Ctc	LSU ribosomal protein L25p		Translation	ATG	 
lmo0212	216434	217018	585	+	216434	217018	585	ORF	lmo0212	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_034	"Transcription; General function prediction only;"	ATG	 
lmo0213	217125	217685	561	+	217125	217685	561	ORF	"similar to peptidyl-tRNA hydrolase; Enables the recycling of peptidyl-tRNAs produced at termination of translation"	peptidyl-tRNA hydrolase	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	Operon_034	Translation	ATG	 
lmo0214	217800	221339	3540	+	217800	221339	3540	ORF		transcription-repair coupling factor	Transcription-repair coupling factor	Operon_034	"Transcription; Replication, recombination and repair;"	TTG	 
lmo0215	221370	222959	1590	+	221370	222959	1590	ORF	conserved membrane-spanning protein	hypothetical protein - RAST_Product: Low temperature requirement B protein	Low temperature requirement B protein	Operon_034	General function prediction only	GTG	 
lmo0216	222983	223261	279	+	222983	223261	279	ORF	highly similar to B. subtilis YabO protein	hypothetical protein - RAST_Product: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	Operon_034	Translation	ATG	 
lmo0217	223490	223876	387	+	223490	223876	387	ORF	similar to B. subtilis DivIC protein	hypothetical protein - RAST_Product: Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	Operon_035	Cell cycle control, mitosis and meiosis	ATG	 
lmo0218	224027	224455	429	+	224027	224455	429	ORF		hypothetical protein - RAST_Product: RNA binding protein, contains ribosomal protein S1 domain	RNA binding protein, contains ribosomal protein S1 domain	Operon_035	Translation	ATG	 
lmo0219	224562	226508	1947	+	224562	226508	1947	ORF		hypothetical protein - RAST_Product: tRNA(Ile)-lysidine synthetase / Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	tRNA(Ile)-lysidine synthetase / Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)		"Cell cycle control, mitosis and meiosis; Nucleotide transport and metabolism;"	ATG	 
lmo0220	226854	228929	2076	+	226854	228929	2076	ORF	highly similar to cell division protein ftsH	hypothetical protein - RAST_Product: Cell division protein FtsH (EC 3.4.24.-)	Cell division protein FtsH (EC 3.4.24.-)		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0221	229045	229824	780	+	229045	229824	780	ORF	"Type III pantothenate kinase; type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP"	pantothenate kinase	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	Operon_036	Transcription	ATG	 
lmo0222	229840	230724	885	+	229840	230724	885	ORF	"33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33); becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers"	Hsp33-like chaperonin	Chaperonin (heat shock protein 33)	Operon_036	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0223	230840	231766	927	+	230840	231766	927	ORF	highly similar to cysteine synthase	hypothetical protein - RAST_Product: Cysteine synthase (EC 2.5.1.47)	Cysteine synthase (EC 2.5.1.47)		Amino acid transport and metabolism	ATG	 
lmo0224	232662	233477	816	+	232662	233477	816	ORF	highly similar to dihydropteroate synthases	hypothetical protein	Dihydropteroate synthase (EC 2.5.1.15)	Operon_037	Coenzyme transport and metabolism	TTG	 
lmo0225	233491	233865	375	+	233491	233865	375	ORF	highly similar to dihydroneopterin aldolase	hypothetical protein - RAST_Product: Dihydroneopterin aldolase (EC 4.1.2.25)	Dihydroneopterin aldolase (EC 4.1.2.25)	Operon_037	Coenzyme transport and metabolism	TTG	 
lmo0226	233858	234337	480	+	233858	234337	480	ORF	similar to 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase	hypothetical protein - RAST_Product: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	Operon_037	Coenzyme transport and metabolism	ATG	 
lmo0227	234414	235409	996	+	234414	235409	996	ORF		hypothetical protein - RAST_Product: tRNA dihydrouridine synthase B (EC 1.-.-.-)	tRNA dihydrouridine synthase B (EC 1.-.-.-)	Operon_037	Translation	ATG	 
lmo0228	235524	237020	1497	+	235524	237020	1497	ORF	"class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1"	lysyl-tRNA synthetase	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	Operon_037	Translation	ATG	 
lmo0229	248555	249013	459	+	248555	249013	459	ORF	highly similar to transcription repressor of class III stress genes (CtsR)	hypothetical protein - RAST_Product: Transcriptional regulator CtsR	Transcriptional regulator CtsR	Operon_038	Transcription	ATG	 
lmo0230	249026	249544	519	+	249026	249544	519	ORF	similar to B. subtilis YacH protein	hypothetical protein - RAST_Product: Nucleotide excision repair protein, with UvrB/UvrC motif	Nucleotide excision repair protein, with UvrB/UvrC motif	Operon_038	Function unknown	ATG	 
lmo0231	249541	250563	1023	+	249541	250563	1023	ORF	similar to arginine kinase	ATP:guanido phosphotransferase	Putative ATP:guanido phosphotransferase YacI (EC 2.7.3.-)	Operon_038	Amino acid transport and metabolism	ATG	 
lmo0232	250592	253054	2463	+	250592	253054	2463	ORF		endopeptidase Clp ATP-binding chain C	ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB	Operon_038	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0233	253200	254573	1374	+	253200	254573	1374	ORF	"similar to DNA repair protein Sms; Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents"	DNA repair protein RadA	DNA repair protein RadA		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo02333	2402357	2402833	477	+	2402357	2402833	477	ORF		Pseudo-gene or RefSeq provisional	Competence transcription factor		Not in COGs	ATG	 
lmo0234	254707	255780	1074	+	254707	255780	1074	ORF	highly similar to B. subtilis YacL protein	hypothetical protein - RAST_Product: Membrane-associated protein containing a homolog of PilT-like ATPase N-terminal domain, YACL B.subtilis ortholog	Membrane-associated protein containing a homolog of PilT-like ATPase N-terminal domain, YACL B.subtilis ortholog	Operon_039	General function prediction only	ATG	 
lmo0235	255800	256498	699	+	255800	256498	699	ORF	"similar to nucleotidylyl transferase, pyrophosphorylase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers"	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	Operon_039	Lipid transport and metabolism	ATG	 
lmo0236	256491	256964	474	+	256491	256964	474	ORF	"similar to B. subtilis YacN protein; catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate"	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	Operon_039	Lipid transport and metabolism	ATG	 
lmo0237	256983	258458	1476	+	256983	258458	1476	ORF	"highly similar to glutamyl-tRNA synthetase; Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation"	glutamyl-tRNA synthetase	Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	Operon_039	Translation	GTG	 
lmo0238	258856	259470	615	+	258856	259470	615	ORF	similar to serine O-acetyltransferase	hypothetical protein - RAST_Product: Serine acetyltransferase (EC 2.3.1.30)	Serine acetyltransferase (EC 2.3.1.30)	Operon_040	Amino acid transport and metabolism	ATG	 
lmo0239	259477	260892	1416	+	259477	260892	1416	ORF	"catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA"	cysteinyl-tRNA synthetase	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	Operon_040	Translation	TTG	 
lmo0240	260896	261306	411	+	260896	261306	411	ORF	highly similar to B. subtilis YazC protein	hypothetical protein - RAST_Product: COG1939: Ribonuclease III family protein	COG1939: Ribonuclease III family protein	Operon_040	Function unknown	ATG	 
lmo0241	261306	262061	756	+	261306	262061	756	ORF	similar to conserved hypothetical proteins like to B. subtilis YacO protein	hypothetical protein - RAST_Product: 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) ## LSU rRNA Gm2251	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) ## LSU rRNA Gm2251	Operon_040	Translation	ATG	 
lmo0242	262064	262576	513	+	262064	262576	513	ORF	similar to B. subtilis Yacp protein	hypothetical protein - RAST_Product: Hypothetical protein DUF901, similar to C-terminal domain of ribosome protection-type Tc-resistance proteins	Hypothetical protein DUF901, similar to C-terminal domain of ribosome protection-type Tc-resistance proteins	Operon_040	General function prediction only	ATG	 
lmo0243	262657	263262	606	+	262657	263262	606	ORF	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	RNA polymerase factor sigma-70	RNA polymerase sporulation specific sigma factor SigH	Operon_040	Transcription	GTG	 
lmo0244	263366	263515	150	+	263366	263515	150	ORF	"similar to ribosomal protein L33 type II; in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif"	50S ribosomal protein L33		Operon_041	Translation	ATG	 
lmo0245	263535	263714	180	+	263535	263714	180	ORF	"highly similar to preprotein translocase subunit; forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force"	preprotein translocase subunit SecE	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	Operon_041	Intracellular trafficking and secretion	ATG	 
lmo0246	263844	264377	534	+	263844	264377	534	ORF	Modulates Rho-dependent transcription termination	transcription antitermination protein NusG	Transcription antitermination protein NusG		Transcription	ATG	 
lmo0247	264432	264902	471	+	264432	264902	471	ORF	lmo0247	hypothetical protein - RAST_Product: FIG00774375: hypothetical protein	FIG00774375: hypothetical protein		Not in COGs	ATG	 
lmo0248	265029	265454	426	+	265029	265454	426	ORF	binds directly to 23S ribosomal RNA	50S ribosomal protein L11	LSU ribosomal protein L11p (L12e)	Operon_042	Translation	GTG	 
lmo0249	265494	266183	690	+	265494	266183	690	ORF	"in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA"	50S ribosomal protein L1	LSU ribosomal protein L1p (L10Ae)	Operon_042	Translation	ATG	 
lmo0250	266431	266931	501	+	266431	266931	501	ORF	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit	50S ribosomal protein L10	LSU ribosomal protein L10p (P0)	Operon_043	Translation	ATG	 
lmo0251	267010	267372	363	+	267010	267372	363	ORF	"present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors"	50S ribosomal protein L7/L12	LSU ribosomal protein L7/L12 (P1/P2)	Operon_043	Translation	ATG	 
lmo0252	267530	267916	387	+	267530	267916	387	ORF	similar to repressor (penicilinase repressor)	hypothetical protein - RAST_Product: transcriptional regulator, putative	transcriptional regulator, putative	Operon_044	Transcription	ATG	 
lmo0253	267909	268949	1041	+	267909	268949	1041	ORF	similar to penicillinase antirepressor	hypothetical protein - RAST_Product: Regulatory sensor-transducer, BlaR1/MecR1 family	Regulatory sensor-transducer, BlaR1/MecR1 family	Operon_044	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo0254	269067	269729	663	+	269067	269729	663	ORF	lmo0254	hypothetical protein - RAST_Product: FIG00774737: hypothetical protein	FIG00774737: hypothetical protein		Not in COGs	ATG	 
lmo0255	269754	270257	504	+	269754	270257	504	ORF		hypothetical protein - RAST_Product: hypothetical lipoprotein	hypothetical lipoprotein		Function unknown	ATG	 
lmo0256	270372	270977	606	+	270372	270977	606	ORF		hypothetical protein - RAST_Product: Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)		Translation	TTG	 
lmo0257	271324	272502	1179	+	271324	272502	1179	ORF		hypothetical protein - RAST_Product: RNA-2',3'-PO4:RNA-5'-OH ligase	RNA-2',3'-PO4:RNA-5'-OH ligase		Function unknown	ATG	 
lmo0258	273003	276557	3555	+	273003	276557	3555	ORF	"DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme"	DNA-directed RNA polymerase subunit beta	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	Operon_045	Transcription	TTG	 
lmo0259	276728	280333	3606	+	276728	280333	3606	ORF	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter	DNA-directed RNA polymerase subunit beta'	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	Operon_045	Transcription	TTG	 
lmo0260	280410	280955	546	+	280410	280955	546	ORF		hypothetical protein - RAST_Product: FIG00774418: hypothetical protein	FIG00774418: hypothetical protein		General function prediction only	TTG	 
lmo0261	281021	282481	1461	+	281021	282481	1461	ORF	similar to phospho-beta-glucosidase	hypothetical protein - RAST_Product: glycosyl hydrolase, family 1( EC:3.2.1.86 )	glycosyl hydrolase, family 1( EC:3.2.1.86 )		Carbohydrate transport and metabolism	ATG	 
lmo0262	282755	284227	1473	+	282755	284227	1473	ORF		internalin G	Internalin G (LPXTG motif)		Cell wall/membrane biogenesis	ATG	 
lmo0263	284365	286011	1647	+	284365	286011	1647	ORF		internalin H	Internalin H (LPXTG motif)		Cell wall/membrane biogenesis	ATG	 
lmo0264	286219	287718	1500	+	286219	287718	1500	ORF		internalin E	Internalin E (LPXTG motif)		Cell wall/membrane biogenesis	ATG	 
lmo0265	287853	288992	1140	+	287853	288992	1140	ORF	"similar to succinyldiaminopimelate desuccinylase; dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica"	succinyl-diaminopimelate desuccinylase	Acetylornithine deacetylase (EC 3.5.1.16)		Amino acid transport and metabolism	ATG	 
lmo0266	289139	289555	417	+	289139	289555	417	ORF	similar to transcriptional regulators	hypothetical protein - RAST_Product: Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Operon_046	Transcription	ATG	 
lmo0267	289562	290521	960	+	289562	290521	960	ORF	similar to other proteins	hypothetical protein - RAST_Product: Glyoxalase family protein	Glyoxalase family protein	Operon_046	Amino acid transport and metabolism	ATG	 
lmo0268	290593	291228	636	+	290593	291228	636	ORF	similar to phosphoglycerate mutase	hypothetical protein - RAST_Product: Hypothetical, related to broad specificity phosphatases COG0406	Hypothetical, related to broad specificity phosphatases COG0406	Operon_046	Carbohydrate transport and metabolism	TTG	 
lmo0269	291312	293198	1887	+	291312	293198	1887	ORF	similar to transporter	hypothetical protein - RAST_Product: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)		"Amino acid transport and metabolism; Inorganic ion transport and metabolism;"	ATG	 
lmo0270	293212	293841	630	-	293212	293841	630	ORF	lmo0270	hypothetical protein - RAST_Product: FIG00774432: hypothetical protein	FIG00774432: hypothetical protein	Operon_047	Carbohydrate transport and metabolism	ATG	 
lmo0271	293845	295281	1437	-	293845	295281	1437	ORF	highly similar to phospho-beta-glucosidase	"hypothetical protein - RAST_Product: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)"	"Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)"	Operon_047	Carbohydrate transport and metabolism	ATG	 
lmo0272	295401	296213	813	-	295401	296213	813	ORF	conserved hypothetical protein similar to B. subtilis YxeH protein	hypothetical protein - RAST_Product: Phosphatase YidA	Phosphatase YidA		General function prediction only	TTG	 
lmo0273	296349	296852	504	+	296349	296852	504	ORF	lmo0273	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family		"Transcription; General function prediction only;"	ATG	 
lmo0274	296889	297551	663	-	296889	297551	663	ORF	lmo0274	hypothetical protein - RAST_Product: FIG00774862: hypothetical protein	FIG00774862: hypothetical protein		Signal transduction mechanisms	ATG	 
lmo0275	297810	298652	843	-	297810	298652	843	ORF		hypothetical protein - RAST_Product: Late competence protein ComEC, DNA transport	Late competence protein ComEC, DNA transport	Operon_048	General function prediction only	ATG	 
lmo0276	298669	299490	822	-	298669	299490	822	ORF		hypothetical protein - RAST_Product: FIG002540: Haloacid dehalogenase-like hydrolase	FIG002540: Haloacid dehalogenase-like hydrolase	Operon_048	General function prediction only	TTG	 
lmo0277	299607	300578	972	+	299607	300578	972	ORF	similar to oxidoreductase	hypothetical protein	oxidoreductase, Gfo/Idh/MocA family		General function prediction only	ATG	 
lmo0278	300617	301717	1101	-	300617	301717	1101	ORF	similar to sugar ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Multiple sugar ABC transporter, ATP-binding protein	Multiple sugar ABC transporter, ATP-binding protein		Carbohydrate transport and metabolism	TTG	 
lmo0279	302008	304140	2133	+	302008	304140	2133	ORF	"highly similar to anaerobic ribonucleoside-triphosphate reductase; Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates"	anaerobic ribonucleoside triphosphate reductase	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	Operon_049	Nucleotide transport and metabolism	ATG	 
lmo0280	304133	304684	552	+	304133	304684	552	ORF	highly similar to anaerobic ribonucleotide reductase activator protein	hypothetical protein - RAST_Product: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	Operon_049	Posttranslational modification, protein turnover, chaperones	GTG	 
lmo0281	304942	305613	672	-	304942	305613	672	ORF	lmo0281	hypothetical protein - RAST_Product: cyclic nucleotide-binding protein	cyclic nucleotide-binding protein		Signal transduction mechanisms	ATG	 
lmo0282	305775	306554	780	-	305775	306554	780	ORF		hypothetical protein - RAST_Product: Aliphatic amidase amiE (EC 3.5.1.4)	Aliphatic amidase amiE (EC 3.5.1.4)	Operon_050	General function prediction only	ATG	 
lmo0283	306644	307306	663	-	306644	307306	663	ORF	similar to ABC transporter permease protein	hypothetical protein - RAST_Product: Methionine ABC transporter permease protein	Methionine ABC transporter permease protein	Operon_050	Inorganic ion transport and metabolism	ATG	 
lmo0284	307303	308319	1017	-	307303	308319	1017	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Methionine ABC transporter ATP-binding protein	Methionine ABC transporter ATP-binding protein	Operon_050	Inorganic ion transport and metabolism	TTG	 
lmo0285	308334	309155	822	-	308334	309155	822	ORF		putative lipoprotein	Methionine ABC transporter substrate-binding protein	Operon_050	Inorganic ion transport and metabolism	ATG	 
lmo0286	309538	310719	1182	+	309538	310719	1182	ORF	"similar to aminotransferase; produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however"	transaminase	Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase		Amino acid transport and metabolism	ATG	 
lmo0287	310932	311645	714	+	310932	311645	714	ORF	similar to two-component response regulator	hypothetical protein - RAST_Product: Two-component response regulator SA14-24	Two-component response regulator SA14-24		"Transcription; Signal transduction mechanisms;"	ATG	 
lmo0288	311830	313662	1833	+	311830	313662	1833	ORF	similar to two-component sensor histidine kinase	hypothetical protein - RAST_Product: Two-component sensor kinase SA14-24	Two-component sensor kinase SA14-24	Operon_051	Signal transduction mechanisms	ATG	 
lmo0289	313659	314981	1323	+	313659	314981	1323	ORF	similar to B. subtilis YycH protein	hypothetical protein - RAST_Product: FIG011501: YycH protein	FIG011501: YycH protein	Operon_051	Function unknown	ATG	 
lmo0290	314984	315823	840	+	314984	315823	840	ORF	similar to B. subtilis YycI protein	hypothetical protein - RAST_Product: hypothetical protein SA_21	hypothetical protein SA_21	Operon_051	Function unknown	ATG	 
lmo0291	315945	316775	831	+	315945	316775	831	ORF	conserved hypothetical protein similar to B. subtilis YycJ protein	hypothetical protein - RAST_Product: Zn-dependent hydrolase YycJ/WalJ, required for cell wall metabolism and coordination of cell division with DNA replication	Zn-dependent hydrolase YycJ/WalJ, required for cell wall metabolism and coordination of cell division with DNA replication	Operon_052	General function prediction only	ATG	 
lmo0292	316873	318375	1503	+	316873	318375	1503	ORF	similar to heat-shock protein htrA serine protease	hypothetical protein - RAST_Product: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	Operon_052	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0293	319049	319528	480	+	319049	319528	480	ORF	"conserved hypothetical protein, highly similar to B. subtilis YydA proteinYyd; SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA"	rRNA large subunit methyltransferase	LSU m3Psi1915 methyltransferase RlmH ## ybeA		Function unknown	ATG	 
lmo0294	319560	320423	864	-	319560	320423	864	ORF	similar to transcription regulator LysR-gltR family	hypothetical protein - RAST_Product: transcriptional regulator, LysR family	transcriptional regulator, LysR family		Transcription	ATG	 
lmo0295	320542	321279	738	+	320542	321279	738	ORF	similar to FMN-containing NADPH-linked nitro/flavin reductase	hypothetical protein - RAST_Product: nitroreductase family protein	nitroreductase family protein		Energy production and conversion	ATG	 
lmo0296	321490	322128	639	+	321490	322128	639	ORF	lmo0296	hypothetical protein - RAST_Product: membrane protein	membrane protein		Not in COGs	ATG	 
lmo0297	322134	324005	1872	-	322134	324005	1872	ORF	similar to transcriptional antiterminator (BglG family)	hypothetical protein - RAST_Product: Transcriptional antiterminator of lichenan operon, BglG family / PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	Transcriptional antiterminator of lichenan operon, BglG family / PTS system, cellobiose-specific IIA component (EC 2.7.1.69)		"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0298	324104	325417	1314	-	324104	325417	1314	ORF	similar to PTS beta-glucoside-specific enzyme IIC component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0299	325422	325712	291	-	325422	325712	291	ORF	similar to PTS beta-glucoside-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0300	325729	327120	1392	-	325729	327120	1392	ORF	similar to phospho-beta-glucosidase and phospho-beta-galactosidase	hypothetical protein - RAST_Product: Beta-glucosidase (EC 3.2.1.21)	Beta-glucosidase (EC 3.2.1.21)		Carbohydrate transport and metabolism	ATG	 
lmo0301	327113	327454	342	-	327113	327454	342	ORF	similar to PTS beta-glucoside-specific enzyme IIA component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	PTS system, cellobiose-specific IIA component (EC 2.7.1.69)		Carbohydrate transport and metabolism	GTG	 
lmo0302	327621	327905	285	+	327621	327905	285	ORF	lmo0302	hypothetical protein	FIG00774746: hypothetical protein	Operon_053	Not in COGs	ATG	 
lmo0303	327941	328495	555	+	327941	328495	555	ORF		putaive secreted, lysin rich protein	lipoprotein	Operon_053	Not in COGs	ATG	 
lmo0304	328701	329966	1266	+	328701	329966	1266	ORF	lmo0304	hypothetical protein - RAST_Product: FIG00774034: hypothetical protein	FIG00774034: hypothetical protein	Operon_054	Not in COGs	ATG	 
lmo0305	329923	330999	1077	+	329923	330999	1077	ORF	similar to low specificity L-allo-threonine aldolase	hypothetical protein - RAST_Product: Low-specificity L-threonine aldolase (EC 4.1.2.5)	Low-specificity L-threonine aldolase (EC 4.1.2.5)	Operon_054	Amino acid transport and metabolism	ATG	 
lmo0306	331063	331446	384	-	331063	331446	384	ORF	lmo0306	hypothetical protein - RAST_Product: FIG00774255: hypothetical protein	FIG00774255: hypothetical protein		Not in COGs	ATG	 
lmo0307	331543	332688	1146	+	331543	332688	1146	ORF	lmo0307	hypothetical protein - RAST_Product: FIG00774072: hypothetical protein	FIG00774072: hypothetical protein		Not in COGs	TTG	 
lmo0308	332776	333132	357	+	332776	333132	357	ORF		Pseudo-gene or RefSeq provisional	FIG00775209: hypothetical protein		Not in COGs	CTT	 
lmo0309	333534	335195	1662	+	333534	335195	1662	ORF		hypothetical protein - RAST_Product: conserved hypothetical protein	conserved hypothetical protein		Function unknown	ATG	 
lmo0310	335350	336426	1077	+	335350	336426	1077	ORF	lmo0310	hypothetical protein - RAST_Product: FIG00775546: hypothetical protein	FIG00775546: hypothetical protein		Not in COGs	ATG	 
lmo0311	336541	337161	621	+	336541	337161	621	ORF	lmo0311	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0312	337161	338363	1203	+	337161	338363	1203	ORF		hypothetical protein - RAST_Product: FIG014574: hypothetical protein	FIG014574: hypothetical protein		Not in COGs	ATG	 
lmo0313	338341	339087	747	+	338341	339087	747	ORF		hypothetical protein	Putative deoxyribonuclease similar to YcfH, type 4		Replication, recombination and repair	TTG	 
lmo0314	339270	340055	786	+	339270	340055	786	ORF		hypothetical protein - RAST_Product: Cellobiose phosphotransferase system YdjC-like protein	Cellobiose phosphotransferase system YdjC-like protein		Function unknown	ATG	 
lmo0315	340278	340952	675	+	340278	340952	675	ORF	similar to thiamin biosynthesis protein	hypothetical protein - RAST_Product: Thiaminase II (EC 3.5.99.2)	Thiaminase II (EC 3.5.99.2)	Operon_055	Transcription	GTG	 
lmo0316	340945	341754	810	+	340945	341754	810	ORF	"similar to hydroxyethylthiazole kinase (ThiM); catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP"	hydroxyethylthiazole kinase	Hydroxyethylthiazole kinase (EC 2.7.1.50)	Operon_055	Coenzyme transport and metabolism	ATG	 
lmo0317	341751	342554	804	+	341751	342554	804	ORF	similar to phosphomethylpyrimidine kinase (ThiD)	hypothetical protein - RAST_Product: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Operon_055	Coenzyme transport and metabolism	ATG	 
lmo0318	342551	343195	645	+	342551	343195	645	ORF	"similar to thiamin-phosphate pyrophosphorylase (ThiE); Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate"	thiamine-phosphate pyrophosphorylase	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Operon_055	Coenzyme transport and metabolism	ATG	 
lmo0319	343221	344636	1416	-	343221	344636	1416	ORF	similar to phospho-beta-glucosidase	hypothetical protein - RAST_Product: 6-phospho-beta-glucosidase (EC 3.2.1.86)	6-phospho-beta-glucosidase (EC 3.2.1.86)		Carbohydrate transport and metabolism	ATG	 
lmo0320	344850	346049	1200	-	344850	346049	1200	ORF	similar to surface protein (peptidoglycan bound, LPXTG motif)	hypothetical protein - RAST_Product: Putative peptidoglycan bound protein (LPXTG motif) Lmo0320 homolog	Putative peptidoglycan bound protein (LPXTG motif) Lmo0320 homolog		Cell wall/membrane biogenesis	ATG	 
lmo0321	346377	347036	660	+	346377	347036	660	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein		Not in COGs	GTG	 
lmo0322	347219	347611	393	+	347219	347611	393	ORF		hypothetical protein - RAST_Product: FIG00774312: hypothetical protein	FIG00774312: hypothetical protein		Not in COGs	ATG	 
lmo0323	347658	348428	771	-	347658	348428	771	ORF		hypothetical protein - RAST_Product: endonuclease/exonuclease/phosphatase family protein	endonuclease/exonuclease/phosphatase family protein		General function prediction only	ATG	 
lmo0324	348586	349065	480	+	348586	349065	480	ORF	lmo0324	hypothetical protein	FIG00774236: hypothetical protein		Not in COGs	TTG	 
lmo0325	349326	350228	903	+	349326	350228	903	ORF	similar to transcriptional regulators	hypothetical protein - RAST_Product: Transcriptional regulator, MutR family	Transcriptional regulator, MutR family		Transcription	ATG	 
lmo0326	350392	351264	873	+	350392	351264	873	ORF	similar to transcriptional regulators	hypothetical protein - RAST_Product: transcriptional activator, putative	transcriptional activator, putative		Transcription	ATG	 
lmo0327	351459	355505	4047	+	351459	355505	4047	ORF	similar to cell surface proteins (LPXTG motif)	hypothetical protein	Internalin-like protein (LPXTG motif) Lmo0327 homolog / murein-hydrolysing domain		Function unknown	ATT	 
lmo0328	355643	356323	681	+	355643	356323	681	ORF	lmo0328	hypothetical protein - RAST_Product: FIG00774571: hypothetical protein	FIG00774571: hypothetical protein		Not in COGs	TTG	 
lmo0329	356567	356872	306	+	356567	356872	306	ORF	similar to transposase	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0330	356890	357705	816	+	356890	357705	816	ORF	similar to transposase	hypothetical protein	ISLmo1, transposase OrfB, C-terminus		Not in COGs	TTG	 
lmo0331	357775	359676	1902	-	357775	359676	1902	ORF	similar to internalin, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo0331 homolog	Internalin-like protein (LPXTG motif) Lmo0331 homolog		Function unknown	ATG	 
lmo0332	360172	360507	336	+	360172	360507	336	ORF	lmo0332	hypothetical protein - RAST_Product: FIG00774436: hypothetical protein	FIG00774436: hypothetical protein		Not in COGs	GTG	 
lmo0333	360936	366272	5337	+	360936	366272	5337	ORF	similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo0333 homolog	Internalin-like protein (LPXTG motif) Lmo0333 homolog		Cell wall/membrane biogenesis	TTG	 
lmo0334	366508	367032	525	+	366508	367032	525	ORF	lmo0334	hypothetical protein - RAST_Product: FIG00775087: hypothetical protein	FIG00775087: hypothetical protein		Not in COGs	ATG	 
lmo0335	367248	367532	285	+	367248	367532	285	ORF	lmo0335	hypothetical protein - RAST_Product: FIG00774928: hypothetical protein	FIG00774928: hypothetical protein	Operon_056	Not in COGs	ATG	 
lmo0336	367533	367901	369	+	367533	367901	369	ORF	lmo0336	hypothetical protein - RAST_Product: FIG00774278: hypothetical protein	FIG00774278: hypothetical protein	Operon_056	Not in COGs	ATG	 
lmo0337	367898	369373	1476	+	367898	369373	1476	ORF	lmo0337	hypothetical protein - RAST_Product: FIG00774154: hypothetical protein	FIG00774154: hypothetical protein	Operon_056	Not in COGs	ATG	 
lmo0338	369377	369757	381	+	369377	369757	381	ORF	lmo0338	hypothetical protein - RAST_Product: FIG00774512: hypothetical protein	FIG00774512: hypothetical protein	Operon_056	Not in COGs	TTG	 
lmo0339	370032	370403	372	+	370032	370403	372	ORF	weakly similar to inorganic pyrophosphatase	hypothetical protein - RAST_Product: Inorganic pyrophosphatase	Inorganic pyrophosphatase	Operon_057	Energy production and conversion	ATG	 
lmo0340	370416	370634	219	+	370416	370634	219	ORF	lmo0340	hypothetical protein - RAST_Product: FIG00774445: hypothetical protein	FIG00774445: hypothetical protein	Operon_057	Not in COGs	ATG	 
lmo0341	370732	371064	333	-	370732	371064	333	ORF	lmo0341	hypothetical protein - RAST_Product: FIG00775309: hypothetical protein	FIG00775309: hypothetical protein		Not in COGs	ATG	 
lmo0342	371130	373127	1998	-	371130	373127	1998	ORF	similar to transketolase	hypothetical protein - RAST_Product: Transketolase (EC 2.2.1.1)	Transketolase (EC 2.2.1.1)	Operon_058	Carbohydrate transport and metabolism	ATG	 
lmo0343	373129	373785	657	-	373129	373785	657	ORF	"similar to transaldolase; similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity"	putative translaldolase	Transaldolase (EC 2.2.1.2)	Operon_058	Carbohydrate transport and metabolism	ATG	 
lmo0344	373832	374596	765	-	373832	374596	765	ORF	similar to dehydrogenase/reductase	short chain dehydrogenase	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	Operon_058	"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo0345	374621	375067	447	-	374621	375067	447	ORF	similar to sugar-phosphate isomerase	hypothetical protein - RAST_Product: Ribose 5-phosphate isomerase B (EC 5.3.1.6)	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	Operon_058	Carbohydrate transport and metabolism	ATG	 
lmo0346	375074	375838	765	-	375074	375838	765	ORF	similar to triosephosphate isomerase	hypothetical protein - RAST_Product: Triosephosphate isomerase (EC 5.3.1.1)	Triosephosphate isomerase (EC 5.3.1.1)	Operon_058	Carbohydrate transport and metabolism	ATG	 
lmo0347	375842	376492	651	-	375842	376492	651	ORF	similar to dihydroxyacetone kinase	hypothetical protein - RAST_Product: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	Operon_058	Carbohydrate transport and metabolism	ATG	 
lmo0348	376514	377509	996	-	376514	377509	996	ORF	similar to dihydroxyacetone kinase	hypothetical protein - RAST_Product: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK	Operon_058	Carbohydrate transport and metabolism	ATG	 
lmo0349	377531	377872	342	-	377531	377872	342	ORF	lmo0349	hypothetical protein - RAST_Product: FIG00774379: hypothetical protein	FIG00774379: hypothetical protein	Operon_058	Not in COGs	ATG	 
lmo0350	377888	378319	432	-	377888	378319	432	ORF	lmo0350	hypothetical protein - RAST_Product: FIG00774050: hypothetical protein	FIG00774050: hypothetical protein	Operon_058	Not in COGs	ATG	 
lmo0351	378404	378781	378	-	378404	378781	378	ORF		phosphotransferase mannnose-specific family component IIA	"Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component"	Operon_058	Function unknown	ATG	 
lmo0352	378964	379728	765	+	378964	379728	765	ORF	highly similar to regulatory proteins (DeoR family)	hypothetical protein - RAST_Product: Transcriptional regulator of rhamnose utilization, DeoR family	Transcriptional regulator of rhamnose utilization, DeoR family		"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0353	379794	380207	414	+	379794	380207	414	ORF		hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family		"Transcription; General function prediction only;"	ATG	 
lmo0354	380253	381779	1527	-	380253	381779	1527	ORF	similar to fatty-acid--CoA ligase	hypothetical protein - RAST_Product: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)		Lipid transport and metabolism	ATG	 
lmo0355	382016	383536	1521	+	382016	383536	1521	ORF	"similar to Flavocytochrome C Fumarate Reductase chain A; Reduces fumarate to succinate in anaerobic bacterial respiration"	fumarate reductase flavoprotein subunit	Fumarate reductase flavoprotein subunit (EC 1.3.99.1)		Energy production and conversion	ATG	 
lmo0356	383710	384726	1017	+	383710	384726	1017	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: oxidoreductase, YhhX family	oxidoreductase, YhhX family		General function prediction only	ATG	 
lmo0357	384926	385372	447	+	384926	385372	447	ORF	similar to PTS system, enzyme IIA component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIA component (EC 2.7.1.69)	PTS system, fructose-specific IIA component (EC 2.7.1.69)	Operon_059	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0358	385386	386780	1395	+	385386	386780	1395	ORF	similar to PTS system, fructose-specific enzyme IIBC component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIBC component (EIIBC-Fru) (Fructose- permease IIBC component) (Phosphotransferase enzyme II, BC component) (EC 2.7.1.69)	PTS system, fructose-specific IIBC component (EIIBC-Fru) (Fructose- permease IIBC component) (Phosphotransferase enzyme II, BC component) (EC 2.7.1.69)	Operon_059	Carbohydrate transport and metabolism	ATG	 
lmo0359	386780	387640	861	+	386780	387640	861	ORF	similar to D-fructose-1,6-biphosphate aldolase	hypothetical protein - RAST_Product: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) homolog	Fructose-bisphosphate aldolase class II (EC 4.1.2.13) homolog	Operon_060	Carbohydrate transport and metabolism	ATG	 
lmo0360	387697	388467	771	+	387697	388467	771	ORF	similar to transcriptional regulator (DeoR family)	hypothetical protein - RAST_Product: Transcriptional regulator of rhamnose utilization, DeoR family	Transcriptional regulator of rhamnose utilization, DeoR family	Operon_060	"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0361	388807	389541	735	-	388807	389541	735	ORF	similar to conserved hypothetical integral membrane protein	hypothetical protein	Twin-arginine translocation protein TatC	Operon_061	Intracellular trafficking and secretion	GTG	 
lmo0362	389538	389717	180	-	389538	389717	180	ORF	similar to conserved hypothetical protein	hypothetical protein - RAST_Product: Twin-arginine translocation protein TatA	Twin-arginine translocation protein TatA	Operon_061	Intracellular trafficking and secretion	ATG	 
lmo0363	389813	390430	618	-	389813	390430	618	ORF	similar to Salmonella typhimurium peptidase E	hypothetical protein	Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)		Amino acid transport and metabolism	ATG	 
lmo0364	390529	391473	945	+	390529	391473	945	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family		Transcription	ATG	 
lmo0365	391604	393052	1449	+	391604	393052	1449	ORF	similar to conserved hypothetical protein	hypothetical protein - RAST_Product: Ferrous iron transport permease EfeU	Ferrous iron transport permease EfeU	Operon_062	Inorganic ion transport and metabolism	ATG	 
lmo0366	393086	394246	1161	+	393086	394246	1161	ORF	conserved hypothetical protein, putative lipoprotein	hypothetical protein - RAST_Product: Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain	Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain	Operon_062	Inorganic ion transport and metabolism	ATG	 
lmo0367	394264	395529	1266	+	394264	395529	1266	ORF	conserved hypothetical protein similar to B. subtilis YwbN protein	hypothetical protein - RAST_Product: Ferrous iron transport peroxidase EfeB	Ferrous iron transport peroxidase EfeB	Operon_062	Inorganic ion transport and metabolism	ATG	 
lmo0368	395602	396111	510	+	395602	396111	510	ORF	similar to different proteins	hypothetical protein - RAST_Product: Putative Nudix hydrolase YfcD (EC 3.6.-.-)	Putative Nudix hydrolase YfcD (EC 3.6.-.-)	Operon_063	"Replication, recombination and repair; General function prediction only;"	GTG	 
lmo0369	396208	396927	720	+	396208	396927	720	ORF	conserved hypothetical protein, highly similar to B. subtilis YeeI protein	hypothetical protein - RAST_Product: FIG007491: hypothetical protein YeeN	FIG007491: hypothetical protein YeeN	Operon_063	Function unknown	ATG	 
lmo0370	396964	397299	336	+	396964	397299	336	ORF		hypothetical protein - RAST_Product: Alkylphosphonate utilization operon protein PhnA	Alkylphosphonate utilization operon protein PhnA	Operon_063	Inorganic ion transport and metabolism	ATG	 
lmo0371	397340	398053	714	-	397340	398053	714	ORF	similar to transcription regulator (GntR family)	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family		Transcription	ATG	 
lmo0372	398210	399652	1443	+	398210	399652	1443	ORF	similar to beta-glucosidase	hypothetical protein - RAST_Product: Beta-glucosidase (EC 3.2.1.21)	Beta-glucosidase (EC 3.2.1.21)	Operon_064	Carbohydrate transport and metabolism	ATG	 
lmo0373	399645	400979	1335	+	399645	400979	1335	ORF	similar to PTS betaglucoside-specific enzyme IIC component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Operon_064	Carbohydrate transport and metabolism	ATG	 
lmo0374	400997	401299	303	+	400997	401299	303	ORF	similar to PTS betaglucoside-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Operon_064	Carbohydrate transport and metabolism	ATG	 
lmo0375	401386	401580	195	+	401386	401580	195	ORF	lmo0375	hypothetical protein - RAST_Product: FIG00774374: hypothetical protein	FIG00774374: hypothetical protein		Not in COGs	ATG	 
lmo0376	401619	402539	921	-	401619	402539	921	ORF	similar to putative transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family		Transcription	ATG	 
lmo0377	402641	403060	420	+	402641	403060	420	ORF	lmo0377	hypothetical protein - RAST_Product: FIG00774253: hypothetical protein	FIG00774253: hypothetical protein		Not in COGs	ATG	 
lmo0378	403279	403725	447	+	403279	403725	447	ORF	lmo0378	hypothetical protein - RAST_Product: FIG00774829: hypothetical protein	FIG00774829: hypothetical protein		Not in COGs	TTG	 
lmo0379	403743	404198	456	+	403743	404198	456	ORF	lmo0379	hypothetical protein - RAST_Product: FIG00774463: hypothetical protein	FIG00774463: hypothetical protein		Not in COGs	ATG	 
lmo0380	404365	404994	630	+	404365	404994	630	ORF	lmo0380	hypothetical protein - RAST_Product: FIG00774330: hypothetical protein	FIG00774330: hypothetical protein		Not in COGs	ATG	 
lmo0381	405221	405607	387	+	405221	405607	387	ORF	lmo0381	hypothetical protein - RAST_Product: FIG00774936: hypothetical protein	FIG00774936: hypothetical protein		Not in COGs	ATG	 
lmo0382	405680	406441	762	-	405680	406441	762	ORF	similar to B. subtilis transcription repressor of myo-inositol catabolism operon IolR	hypothetical protein - RAST_Product: Transcriptional repressor of the myo-inositol catabolic operon DeoR family	Transcriptional repressor of the myo-inositol catabolic operon DeoR family		"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0383	406637	408103	1467	+	406637	408103	1467	ORF	highly similar to B. subtilis methylmalonate-semialdehyde dehydrogenase IolA	hypothetical protein - RAST_Product: Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)	Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)	Operon_065	Energy production and conversion	ATG	 
lmo0384	408116	408937	822	+	408116	408937	822	ORF	similar to B. subtilis IolB protein	hypothetical protein - RAST_Product: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)	5-deoxy-glucuronate isomerase (EC 5.3.1.-)	Operon_065	Carbohydrate transport and metabolism	ATG	 
lmo0385	408954	409931	978	+	408954	409931	978	ORF	similar to B. subtilis IolC protein and to fructokinase	hypothetical protein - RAST_Product: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)	5-keto-2-deoxygluconokinase (EC 2.7.1.92)	Operon_065	Carbohydrate transport and metabolism	ATG	 
lmo0386	409944	411860	1917	+	409944	411860	1917	ORF	similar to B. subtilis IolD protein, to acetolactate synthase	hypothetical protein	Epi-inositol hydrolase (EC 3.7.1.-)	Operon_065	Amino acid transport and metabolism	GTG	 
lmo0387	411992	412363	372	+	411992	412363	372	ORF	similar to B. subtilis YhdG protein	hypothetical protein - RAST_Product: FIG00774639: hypothetical protein	FIG00774639: hypothetical protein	Operon_066	Function unknown	ATG	 
lmo0388	412457	412825	369	+	412457	412825	369	ORF	lmo0388	hypothetical protein - RAST_Product: FIG00774531: hypothetical protein	FIG00774531: hypothetical protein	Operon_066	Not in COGs	ATG	 
lmo0389	412849	413964	1116	-	412849	413964	1116	ORF		low temperature requirement protein A	Low temperature requirement protein A		Function unknown	GTG	 
lmo0390	414095	414760	666	+	414095	414760	666	ORF	"similar to uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine"	uracil-DNA glycosylase	Uracil-DNA glycosylase, family 1		Replication, recombination and repair	ATG	 
lmo0391	414928	415227	300	+	414928	415227	300	ORF	lmo0391	hypothetical protein - RAST_Product: FIG00774566: hypothetical protein	FIG00774566: hypothetical protein	Operon_067	Posttranslational modification, protein turnover, chaperones	TTG	 
lmo0392	415224	416168	945	+	415224	416168	945	ORF	highly similar to B. subtilis YqfA protein	hypothetical protein - RAST_Product: DUF1432 domain-containing protein	DUF1432 domain-containing protein	Operon_067	Function unknown	ATG	 
lmo0393	416203	416652	450	+	416203	416652	450	ORF	lmo0393	hypothetical protein - RAST_Product: FIG00774100: hypothetical protein	FIG00774100: hypothetical protein	Operon_067	Not in COGs	ATG	 
lmo0394	416796	417479	684	+	416796	417479	684	ORF	similar to L. monocytogenes extracellular P60 protein	hypothetical protein	peptidoglycan lytic protein P45		Cell wall/membrane biogenesis	TTG	 
lmo0395	417535	417960	426	+	417535	417960	426	ORF	weakly similar to blasticidin S-acetyltransferase	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family		"Transcription; General function prediction only;"	ATG	 
lmo0396	417963	418763	801	-	417963	418763	801	ORF	"similar to 1-pyrroline-5-carboxylate reductase (ProC); catalyzes the formation of L-proline from pyrroline-5-carboxylate"	pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)		Amino acid transport and metabolism	ATG	 
lmo0397	418891	419373	483	+	418891	419373	483	ORF		hypothetical protein - RAST_Product: FIG00774136: hypothetical protein	FIG00774136: hypothetical protein		Function unknown	ATG	 
lmo0398	419544	420002	459	+	419544	420002	459	ORF	similar to phosphotransferase system enzyme IIA	hypothetical protein - RAST_Product: PTS system, IIA component	PTS system, IIA component	Operon_068	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0399	419999	420331	333	+	419999	420331	333	ORF	similar to fructose-specific phosphotransferase enzyme IIB	hypothetical protein - RAST_Product: PTS system, IIB component	PTS system, IIB component	Operon_068	Carbohydrate transport and metabolism	ATG	 
lmo0400	420335	421447	1113	+	420335	421447	1113	ORF	similar to fructose-specific phosphotransferase enzyme IIC	hypothetical protein - RAST_Product: PTS system, fructose-specific, IIC component	PTS system, fructose-specific, IIC component	Operon_068	Carbohydrate transport and metabolism	ATG	 
lmo0401	421469	424096	2628	+	421469	424096	2628	ORF	highly similar to E. col YbgG protein, a putative sugar hydrolase	alpha-mannosidase	Alpha-mannosidase (EC 3.2.1.24)	Operon_068	Carbohydrate transport and metabolism	ATG	 
lmo0402	424130	426064	1935	+	424130	426064	1935	ORF	similar to transcriptional antiterminator (BglG family)	hypothetical protein - RAST_Product: PRD/PTS system IIA 2 domain protein	PRD/PTS system IIA 2 domain protein	Operon_068	"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0403	426190	426606	417	+	426190	426606	417	ORF	lmo0403	hypothetical protein - RAST_Product: FIG00774247: hypothetical protein	FIG00774247: hypothetical protein	Operon_069	Not in COGs	ATG	 
lmo0404	426597	426995	399	+	426597	426995	399	ORF	lmo0404	hypothetical protein - RAST_Product: FIG00774624: hypothetical protein	FIG00774624: hypothetical protein	Operon_069	Not in COGs	ATG	 
lmo0405	427104	428111	1008	+	427104	428111	1008	ORF	similar to phosphate transport protein	hypothetical protein - RAST_Product: Probable low-affinity inorganic phosphate transporter	Probable low-affinity inorganic phosphate transporter	Operon_070	Inorganic ion transport and metabolism	ATG	 
lmo0406	428127	428507	381	+	428127	428507	381	ORF	similar to B. subtilis YyaH protein	hypothetical protein - RAST_Product: Possible glyoxylase family protein (Lactoylglutathione lyase) (EC 4.4.1.5)	Possible glyoxylase family protein (Lactoylglutathione lyase) (EC 4.4.1.5)	Operon_070	Amino acid transport and metabolism	ATG	 
lmo0407	428576	428968	393	+	428576	428968	393	ORF	lmo0407	hypothetical protein - RAST_Product: FIG00774041: hypothetical protein	FIG00774041: hypothetical protein	Operon_070	Function unknown	ATG	 
lmo0408	428981	429403	423	+	428981	429403	423	ORF	lmo0408	hypothetical protein - RAST_Product: FIG00774518: hypothetical protein	FIG00774518: hypothetical protein	Operon_070	Function unknown	ATG	 
lmo0409	429630	432095	2466	+	429630	432095	2466	ORF	similar to internalin, peptidoglycan bound protein (LPxTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo0409 homolog	Internalin-like protein (LPXTG motif) Lmo0409 homolog		Cell wall/membrane biogenesis	ATG	 
lmo0410	432143	433249	1107	-	432143	433249	1107	ORF		Pseudo-gene or RefSeq provisional			Not in COGs	ACA	 
lmo0411	433153	434745	1593	-	433153	434745	1593	ORF	"similar to phosphoenolpyruvate synthase (N-terminal part); catalyzes the formation of phosphoenolpyruvate from pyruvate"	phosphoenolpyruvate synthase	Phosphoenolpyruvate synthase (EC 2.7.9.2)	Operon_071	Carbohydrate transport and metabolism	ATG	 
lmo0412	434945	435817	873	-	434945	435817	873	ORF	lmo0412	hypothetical protein	FIG00774089: hypothetical protein		Not in COGs	ATG	 
lmo0413	436161	436352	192	+	436161	436352	192	ORF	lmo0413	hypothetical protein - RAST_Product: FIG00774444: hypothetical protein	FIG00774444: hypothetical protein	Operon_072	Not in COGs	ATG	 
lmo0414	436379	437188	810	+	436379	437188	810	ORF		hypothetical protein - RAST_Product: Metal transporter, ZIP family	Metal transporter, ZIP family	Operon_072	Inorganic ion transport and metabolism	TTG	 
lmo0415	437482	438882	1401	+	437482	438882	1401	ORF	similar to endo-1,4-beta-xylanase	hypothetical protein	Peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)		Cell wall/membrane biogenesis	GTG	 
lmo0416	439009	439212	204	+	439009	439212	204	ORF	similar to putative transcription regulator	hypothetical protein - RAST_Product: DNA-binding protein	DNA-binding protein		Transcription	TTG	 
lmo0417	439214	439624	411	+	439214	439624	411	ORF	lmo0417	hypothetical protein - RAST_Product: FIG00774627: hypothetical protein	FIG00774627: hypothetical protein		Not in COGs	ATG	 
lmo0418	439677	439976	300	-	439677	439976	300	ORF	lmo0418	hypothetical protein - RAST_Product: FIG00774772: hypothetical protein	FIG00774772: hypothetical protein	Operon_073	Replication, recombination and repair	ATG	 
lmo0419	440056	440610	555	-	440056	440610	555	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_073	Function unknown	TTG	 
lmo0420	440758	441570	813	+	440758	441570	813	ORF		hypothetical protein - RAST_Product: Cof-like hydrolase	Cof-like hydrolase		General function prediction only	ATG	 
lmo0421	441622	442872	1251	-	441622	442872	1251	ORF	similar to rod shape-determining protein RodA	hypothetical protein - RAST_Product: Cell division protein FtsW	Cell division protein FtsW	Operon_074	Cell cycle control, mitosis and meiosis	ATG	 
lmo0422	442869	443300	432	-	442869	443300	432	ORF	part of sigC operon that is induced by temperature upshift	lineage-specific thermal regulator protein	Transcriptional regulator, PadR family	Operon_074	Transcription	ATG	 
lmo0423	443303	443851	549	-	443303	443851	549	ORF	"similar to RNA polymerase ECF-type sigma factor; part of sigC operon induced by temperature upshift"	RNA polymerase factor sigma C	RNA polymerase sigma-70 factor, ECF subfamily	Operon_074	Transcription	ATG	 
lmo0424	444031	444888	858	-	444031	444888	858	ORF	similar to Staphylococcus xylosus glucose uptake protein	hypothetical protein - RAST_Product: sugar transporter	sugar transporter		Carbohydrate transport and metabolism	ATG	 
lmo0425	445049	447010	1962	+	445049	447010	1962	ORF	similar to transcription antiterminator BglG family	hypothetical protein - RAST_Product: PRD/PTS system regulatory domain protein	PRD/PTS system regulatory domain protein	Operon_075	"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0426	447010	447474	465	+	447010	447474	465	ORF	similar to PTS fructose-specific enzyme IIA component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIA component (EC 2.7.1.69)	PTS system, fructose-specific IIA component (EC 2.7.1.69)	Operon_075	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0427	447471	447791	321	+	447471	447791	321	ORF	similar to PTS fructose-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIB component (EC 2.7.1.69)	PTS system, fructose-specific IIB component (EC 2.7.1.69)	Operon_075	Carbohydrate transport and metabolism	ATG	 
lmo0428	447804	448910	1107	+	447804	448910	1107	ORF	similar to PTS fructose-specific enzyme IIC component	hypothetical protein - RAST_Product: PTS system, IIC component	PTS system, IIC component	Operon_075	Carbohydrate transport and metabolism	ATG	 
lmo0429	448926	451508	2583	+	448926	451508	2583	ORF	similar to sugar hydrolase	hypothetical protein - RAST_Product: Alpha-mannosidase (EC 3.2.1.24)	Alpha-mannosidase (EC 3.2.1.24)	Operon_075	Carbohydrate transport and metabolism	ATG	 
lmo0430	451531	452406	876	-	451531	452406	876	ORF	similar to transcriptional regulator (LysR family)	hypothetical protein - RAST_Product: transcriptional regulator, LysR family	transcriptional regulator, LysR family		Transcription	ATG	 
lmo0431	452524	453093	570	+	452524	453093	570	ORF	similar to acetyltransferase	hypothetical protein - RAST_Product: Maltose O-acetyltransferase (EC 2.3.1.79)	Maltose O-acetyltransferase (EC 2.3.1.79)	Operon_076	General function prediction only	ATG	 
lmo0432	453107	453853	747	+	453107	453853	747	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: oxidoreductase, short-chain dehydrogenase/reductase family	oxidoreductase, short-chain dehydrogenase/reductase family	Operon_076	General function prediction only	ATG	 
lmo0433	454534	456936	2403	+	454534	456936	2403	ORF		internalin A	Internalin A (LPXTG motif)	Operon_077	Cell wall/membrane biogenesis	GTG	 
lmo0434	457021	458913	1893	+	457021	458913	1893	ORF		internalin B	Internalin B (GW modules)	Operon_077	Cell wall/membrane biogenesis	GTG	 
lmo0435	459681	465722	6042	+	459681	465722	6042	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo0435 homolog		Not in COGs	TTG	 
lmo0436	465934	466419	486	-	465934	466419	486	ORF		hypothetical protein - RAST_Product: Rrf2 family transcriptional regulator, group III	Rrf2 family transcriptional regulator, group III		Transcription	TTG	 
lmo0437	466517	467362	846	+	466517	467362	846	ORF		hypothetical protein - RAST_Product: NADPH:quinone oxidoreductase 2 ## possible protective/detoxification role	NADPH:quinone oxidoreductase 2 ## possible protective/detoxification role		"Cell wall/membrane biogenesis; Carbohydrate transport and metabolism;"	ATG	 
lmo0438	467519	468136	618	+	467519	468136	618	ORF	lmo0438	hypothetical protein	FIG00775048: hypothetical protein		Not in COGs	GTG	 
lmo0439	468169	469437	1269	-	468169	469437	1269	ORF	weakly similar to a module of peptide synthetase	hypothetical protein - RAST_Product: Siderophore/Surfactin synthetase related protein	Siderophore/Surfactin synthetase related protein		General function prediction only	ATG	 
lmo0440	469575	470078	504	+	469575	470078	504	ORF	lmo0440	hypothetical protein - RAST_Product: FIG00774042: hypothetical protein	FIG00774042: hypothetical protein		Not in COGs	ATG	 
lmo0441	470122	472158	2037	-	470122	472158	2037	ORF	similar to penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)	hypothetical protein - RAST_Product: Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)		Cell wall/membrane biogenesis	ATG	 
lmo0442	472330	472644	315	+	472330	472644	315	ORF	lmo0442	hypothetical protein - RAST_Product: FIG00774675: hypothetical protein	FIG00774675: hypothetical protein		Not in COGs	ATG	 
lmo0443	472781	473710	930	+	472781	473710	930	ORF	similar to B. subtilis transcription regulator LytR	hypothetical protein - RAST_Product: Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F1 (as in PMID19099556)	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F1 (as in PMID19099556)		Transcription	ATG	 
lmo0444	473936	476716	2781	+	473936	476716	2781	ORF		hypothetical protein - RAST_Product: FIG00776024: hypothetical protein	FIG00776024: hypothetical protein		Function unknown	ATG	 
lmo0445	476960	478447	1488	+	476960	478447	1488	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: FIG00775532: hypothetical protein	FIG00775532: hypothetical protein		Transcription	ATG	 
lmo0446	478721	479710	990	+	478721	479710	990	ORF	similar to penicillin acylase and to conjugated bile acid hydrolase	hypothetical protein - RAST_Product: Choloylglycine hydrolase	Choloylglycine hydrolase		Cell wall/membrane biogenesis	ATG	 
lmo0447	479765	481153	1389	+	479765	481153	1389	ORF	similar to glutamate decarboxylase	hypothetical protein - RAST_Product: Glutamate decarboxylase (EC 4.1.1.15)	Glutamate decarboxylase (EC 4.1.1.15)		Amino acid transport and metabolism	ATG	 
lmo0448	481250	482701	1452	+	481250	482701	1452	ORF	similar to amino acid antiporter	hypothetical protein - RAST_Product: Probable glutamate/gamma-aminobutyrate antiporter	Probable glutamate/gamma-aminobutyrate antiporter		Amino acid transport and metabolism	ATG	 
lmo0449	483166	483891	726	+	483166	483891	726	ORF	lmo0449	hypothetical protein - RAST_Product: membrane protein	membrane protein		Not in COGs	ATG	 
lmo0450	483934	484599	666	-	483934	484599	666	ORF		hypothetical protein - RAST_Product: FIG00774755: hypothetical protein	FIG00774755: hypothetical protein	Operon_078	Function unknown	ATG	 
lmo0451	484620	485375	756	-	484620	485375	756	ORF	lmo0451	hypothetical protein - RAST_Product: FIG00774112: hypothetical protein	FIG00774112: hypothetical protein	Operon_078	Signal transduction mechanisms	ATG	 
lmo0452	485493	487652	2160	-	485493	487652	2160	ORF		hypothetical protein - RAST_Product: FIG001454: Transglutaminase-like enzymes, putative cysteine proteases	FIG001454: Transglutaminase-like enzymes, putative cysteine proteases	Operon_079	Amino acid transport and metabolism	ATG	 
lmo0453	487649	488797	1149	-	487649	488797	1149	ORF		hypothetical protein	FIG002343: hypothetical protein	Operon_079	General function prediction only	ATG	 
lmo0454	488802	489749	948	-	488802	489749	948	ORF	conserved hypothetical protein similar to B. subtilis YeaC	hypothetical protein - RAST_Product: FIG022979: MoxR-like ATPases	FIG022979: MoxR-like ATPases	Operon_079	General function prediction only	ATG	 
lmo0455	489905	491500	1596	+	489905	491500	1596	ORF		hypothetical protein - RAST_Product: Regulator of polyketide synthase expression	Regulator of polyketide synthase expression		"Signal transduction mechanisms; Secondary metabolites biosynthesis, transport and catabolism;"	TTG	 
lmo0456	491634	492917	1284	+	491634	492917	1284	ORF	similar to permeases	hypothetical protein - RAST_Product: Cytosine/purine/uracil/thiamine/allantoin permease family protein	Cytosine/purine/uracil/thiamine/allantoin permease family protein	Operon_080	Nucleotide transport and metabolism	ATG	 
lmo0457	492918	494018	1101	+	492918	494018	1101	ORF		hypothetical protein - RAST_Product: Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization	Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization	Operon_080	Function unknown	ATG	 
lmo0458	494011	495561	1551	+	494011	495561	1551	ORF	similar to hydantoinase	hypothetical protein - RAST_Product: N-methylhydantoinase (ATP-hydrolyzing) (EC 3.5.2.14)	N-methylhydantoinase (ATP-hydrolyzing) (EC 3.5.2.14)	Operon_080	"Amino acid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism;"	ATG	 
lmo0459	496381	497919	1539	+	496381	497919	1539	ORF	similar to transcription regulator (VirR from Streptococcus pyogenes)	hypothetical protein - RAST_Product: Conserved domain protein	Conserved domain protein		Not in COGs	ATG	 
lmo0460	498171	500240	2070	+	498171	500240	2070	ORF		putative membrane associated lipoprotein	Conserved domain protein		Function unknown	ATG	 
lmo0461	500306	500779	474	+	500306	500779	474	ORF	lmo0461	hypothetical protein - RAST_Product: FIG00774095: hypothetical protein	FIG00774095: hypothetical protein		Not in COGs	ATG	 
lmo0462	500799	501284	486	+	500799	501284	486	ORF	lmo0462	hypothetical protein - RAST_Product: FIG00775202: hypothetical protein	FIG00775202: hypothetical protein		Not in COGs	ATG	 
lmo0463	501312	501617	306	+	501312	501617	306	ORF	lmo0463	hypothetical protein - RAST_Product: Putative peptidoglycan bound protein (LPXTG motif) Lmo0463 homolog	Putative peptidoglycan bound protein (LPXTG motif) Lmo0463 homolog		Not in COGs	TTG	 
lmo0464	501693	501959	267	+	501693	501959	267	ORF	weakly similar to transposase	hypothetical protein	transposase OrfA, IS3 family, putative		Replication, recombination and repair	ATG	 
lmo0465	502424	502660	237	-	502424	502660	237	ORF		hypothetical protein			Not in COGs	ATG	 
lmo0466	502899	504629	1731	+	502899	504629	1731	ORF	lmo0466	hypothetical protein - RAST_Product: Lmo0466 protein	Lmo0466 protein	Operon_081	Not in COGs	ATG	 
lmo0467	504674	504997	324	+	504674	504997	324	ORF	lmo0467	hypothetical protein		Operon_081	Not in COGs	ATG	 
lmo0468	504972	505277	306	+	504972	505277	306	ORF	lmo0468	hypothetical protein		Operon_081	Not in COGs	GTG	 
lmo0469	505351	506223	873	+	505351	506223	873	ORF	lmo0469	hypothetical protein - RAST_Product: FIG00776455: hypothetical protein	FIG00776455: hypothetical protein	Operon_081	Not in COGs	TTG	 
lmo0470	506368	506997	630	+	506368	506997	630	ORF	weakly similar to site-specific DNA-methyltransferase	hypothetical protein - RAST_Product: Adenine-specific methyltransferase (EC 2.1.1.72)	Adenine-specific methyltransferase (EC 2.1.1.72)		Replication, recombination and repair	TTG	 
lmo0471	507723	508733	1011	+	507723	508733	1011	ORF	lmo0471	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0472	509400	510287	888	+	509400	510287	888	ORF	lmo0472	hypothetical protein	FIG00776455: hypothetical protein	Operon_082	Not in COGs	TTG	 
lmo0473	510127	511212	1086	+	510127	511212	1086	ORF		Pseudo-gene or RefSeq provisional	FIG00775205: hypothetical protein		Not in COGs	AGG	 
lmo0474	511215	511562	348	+	511215	511562	348	ORF	lmo0474	hypothetical protein - RAST_Product: FIG00775121: hypothetical protein	FIG00775121: hypothetical protein	Operon_082	Not in COGs	ATG	 
lmo0475	511966	512208	243	+	511966	512208	243	ORF	lmo0475	hypothetical protein	hypothetical protein	Operon_082	Not in COGs	GTG	 
lmo0476	512291	513268	978	-	512291	513268	978	ORF	similar to oxetanocin A resistance protein oxrB	hypothetical protein	Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1)		General function prediction only	ATG	 
lmo0477	514004	514381	378	+	514004	514381	378	ORF		putative secreted protein	putative secreted protein		Not in COGs	ATG	 
lmo0478	514681	515058	378	+	514681	515058	378	ORF		putative secreted protein	putative secreted protein		Not in COGs	ATG	 
lmo0479	515391	515750	360	+	515391	515750	360	ORF		putative secreted protein	putative secreted protein		Not in COGs	ATG	 
lmo0480	516076	516636	561	+	516076	516636	561	ORF	similar to putative transcriptional regulator	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Operon_083	Transcription	ATG	 
lmo0481	516746	518446	1701	+	516746	518446	1701	ORF	in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever	myosin-cross-reactive antigen	antigen, putative	Operon_083	Function unknown	ATG	 
lmo0482	518597	519700	1104	+	518597	519700	1104	ORF	"similar to conserved hypothetical proteins, highly similar to B. subtilis YloN protein; 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance"	ribosomal RNA large subunit methyltransferase N	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)		General function prediction only	ATG	 
lmo0483	519789	520268	480	+	519789	520268	480	ORF	lmo0483	hypothetical protein - RAST_Product: Transcriptional regulator, AraC family	Transcriptional regulator, AraC family		Function unknown	ATG	 
lmo0484	520426	520791	366	+	520426	520791	366	ORF	"lmo0484; iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source"	heme-degrading monooxygenase IsdG	conserved hypothetical protein		General function prediction only	ATG	 
lmo0485	520961	521536	576	+	520961	521536	576	ORF	lmo0485	hypothetical protein - RAST_Product: Putative nitroreductase family protein SACOL0874	Putative nitroreductase family protein SACOL0874		Energy production and conversion	ATG	 
lmo0486	521601	521771	171	+	521601	521771	171	ORF	some L32 proteins have zinc finger motifs consisting of CXXC while others do not	50S ribosomal protein L32	LSU ribosomal protein L32p		Translation	ATG	 
lmo0487	521863	522591	729	+	521863	522591	729	ORF	lmo0487	hypothetical protein - RAST_Product: ADP-ribose pyrophosphatase (EC 3.6.1.13)	ADP-ribose pyrophosphatase (EC 3.6.1.13)		Nucleotide transport and metabolism	ATG	 
lmo0488	522628	523521	894	-	522628	523521	894	ORF	similar to transcriptional regulator (LysR family)	hypothetical protein - RAST_Product: transcriptional regulator, LysR family	transcriptional regulator, LysR family		Transcription	ATG	 
lmo0489	523719	525713	1995	+	523719	525713	1995	ORF	similar to NADH:flavin oxidoreductase	hypothetical protein - RAST_Product: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)		"Energy production and conversion; General function prediction only;"	ATG	 
lmo0490	525813	526688	876	+	525813	526688	876	ORF	"similar to shikimate 5-dehydrogenase; AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate"	shikimate 5-dehydrogenase	Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)	Operon_084	Amino acid transport and metabolism	ATG	 
lmo0491	526754	527512	759	+	526754	527512	759	ORF	"similar to 3-dehydroquinate dehydratase; catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis"	3-dehydroquinate dehydratase	3-dehydroquinate dehydratase I (EC 4.2.1.10)	Operon_084	Amino acid transport and metabolism	ATG	 
lmo0492	527580	528488	909	-	527580	528488	909	ORF	similar to transcriptional regulator (LysR family)	hypothetical protein - RAST_Product: transcriptional regulator, LysR family	transcriptional regulator, LysR family		Transcription	ATG	 
lmo0493	528563	530323	1761	-	528563	530323	1761	ORF	similar to acylase	hypothetical protein - RAST_Product: hydrolase, CocE/NonD family	hydrolase, CocE/NonD family		General function prediction only	ATG	 
lmo0494	530515	531108	594	+	530515	531108	594	ORF	weakly similar to esterase	hypothetical protein - RAST_Product: lipase/acylhydrolase family protein	lipase/acylhydrolase family protein		Amino acid transport and metabolism	ATG	 
lmo0495	531294	532253	960	+	531294	532253	960	ORF	similar to transmembrane protein	hypothetical protein - RAST_Product: Permease of the drug/metabolite transporter (DMT) superfamily	Permease of the drug/metabolite transporter (DMT) superfamily		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; General function prediction only;"	TTG	 
lmo0496	532328	532552	225	+	532328	532552	225	ORF	similar to B. subtilis YnzC protein	hypothetical protein - RAST_Product: FIG00774392: hypothetical protein	FIG00774392: hypothetical protein		Function unknown	ATG	 
lmo0497	532603	534111	1509	-	532603	534111	1509	ORF	similar to sugar transferase	hypothetical protein - RAST_Product: glycosyl transferase	glycosyl transferase		Cell wall/membrane biogenesis	ATG	 
lmo0498	534307	534756	450	+	534307	534756	450	ORF	similar to ribose 5-phosphate isomerase	hypothetical protein - RAST_Product: Ribose 5-phosphate isomerase B (EC 5.3.1.6)	Ribose 5-phosphate isomerase B (EC 5.3.1.6)		Carbohydrate transport and metabolism	ATG	 
lmo0499	534753	535421	669	+	534753	535421	669	ORF	similar to ribulose-5-phosphate 3 epimerase	hypothetical protein - RAST_Product: Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)		Carbohydrate transport and metabolism	ATG	 
lmo0500	535428	536078	651	+	535428	536078	651	ORF	similar to transaldolase	hypothetical protein - RAST_Product: Transaldolase (EC 2.2.1.2)	Transaldolase (EC 2.2.1.2)		Carbohydrate transport and metabolism	ATG	 
lmo0501	536187	538247	2061	+	536187	538247	2061	ORF	similar to transcription antiterminator BglG family	hypothetical protein - RAST_Product: Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component (EC 2.7.1.69)	Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component (EC 2.7.1.69)	Operon_085	"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0502	538251	538853	603	+	538251	538853	603	ORF	similar to putative sugar-phosphate isomerase	hypothetical protein - RAST_Product: Polysialic acid capsule expression protein KpsF	Polysialic acid capsule expression protein KpsF	Operon_085	Cell wall/membrane biogenesis	TTG	 
lmo0503	538881	539348	468	+	538881	539348	468	ORF	similar to PTS fructose-specific enzyme IIA component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIA component (EC 2.7.1.69)	PTS system, galactitol-specific IIA component (EC 2.7.1.69)	Operon_085	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	TTG	 
lmo0504	539365	539763	399	+	539365	539763	399	ORF	lmo0504	hypothetical protein - RAST_Product: FIG00774044: hypothetical protein	FIG00774044: hypothetical protein	Operon_085	Not in COGs	ATG	 
lmo0505	539774	540424	651	+	539774	540424	651	ORF	similar to ribulose-5-phosphate 3-epimerase	hypothetical protein - RAST_Product: Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	Operon_085	Carbohydrate transport and metabolism	GTG	 
lmo0506	540421	541467	1047	+	540421	541467	1047	ORF	similar to polyol (sorbitol) dehydrogenase	hypothetical protein - RAST_Product: Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	Operon_085	"Amino acid transport and metabolism; General function prediction only;"	ATG	 
lmo0507	541483	541776	294	+	541483	541776	294	ORF	similar to PTS system, Galactitol-specific IIB component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIB component (EC 2.7.1.69)	PTS system, galactitol-specific IIB component (EC 2.7.1.69)	Operon_085	Carbohydrate transport and metabolism	ATG	 
lmo0508	541791	543062	1272	+	541791	543062	1272	ORF	similar to PTS system, Galactitol-specific IIC component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIC component (EC 2.7.1.69)	PTS system, galactitol-specific IIC component (EC 2.7.1.69)	Operon_085	Carbohydrate transport and metabolism	ATG	 
lmo0509	543202	544137	936	+	543202	544137	936	ORF	similar to phosphoribosyl pyrophosphate synthetase	hypothetical protein - RAST_Product: Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)		"Amino acid transport and metabolism; Nucleotide transport and metabolism;"	ATG	 
lmo0510	544923	545501	579	+	544923	545501	579	ORF	lmo0510	hypothetical protein - RAST_Product: FIG00774638: hypothetical protein	FIG00774638: hypothetical protein		Not in COGs	TTG	 
lmo0511	545609	546289	681	+	545609	546289	681	ORF		hypothetical protein	glutamine amidotransferase, class I		Nucleotide transport and metabolism	TTG	 
lmo0512	546314	546673	360	-	546314	546673	360	ORF	lmo0512	hypothetical protein	FIG00774661: hypothetical protein		Not in COGs	ATG	 
lmo0513	546680	547138	459	-	546680	547138	459	ORF	weakly similar to transcription regulator	hypothetical protein - RAST_Product: transcriptional regulator, MarR family	transcriptional regulator, MarR family		Transcription	ATG	 
lmo0514	547520	549337	1818	+	547520	549337	1818	ORF	similar to internalin protein, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo0514 homolog	Internalin-like protein (LPXTG motif) Lmo0514 homolog		Not in COGs	ATG	 
lmo0515	549438	549869	432	+	549438	549869	432	ORF		hypothetical protein	universal stress protein family		Signal transduction mechanisms	ATG	 
lmo0516	549916	551346	1431	-	549916	551346	1431	ORF	similar to Bacillus anthracis encapsulation protein CapA	hypothetical protein - RAST_Product: Capsule biosynthesis protein capA	Capsule biosynthesis protein capA		Cell wall/membrane biogenesis	TTG	 
lmo0517	551467	552282	816	-	551467	552282	816	ORF	similar to phosphoglycerate mutase	hypothetical protein - RAST_Product: Hypothetical, related to broad specificity phosphatases COG0406	Hypothetical, related to broad specificity phosphatases COG0406		Carbohydrate transport and metabolism	ATG	 
lmo0518	552563	552931	369	-	552563	552931	369	ORF		hypothetical protein - RAST_Product: FIG00774559: hypothetical protein	FIG00774559: hypothetical protein		Function unknown	ATG	 
lmo0519	553078	554493	1416	+	553078	554493	1416	ORF	similar to multidrug resistance protein	hypothetical protein - RAST_Product: drug resistance transporter, EmrB/QacA family	drug resistance transporter, EmrB/QacA family		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo0520	554624	555628	1005	+	554624	555628	1005	ORF	similar to transcription regulator	hypothetical protein	N-acetylglucosamine kinase bacterial type predicted (EC 2.7.1.59) homolog / Transcriptional regulator		"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0521	555660	556976	1317	-	555660	556976	1317	ORF	similar to 6-phospho-beta-glucosidase	hypothetical protein - RAST_Product: 6-phospho-beta-glucosidase (EC 3.2.1.86)	6-phospho-beta-glucosidase (EC 3.2.1.86)		Carbohydrate transport and metabolism	ATG	 
lmo0522	557178	557930	753	+	557178	557930	753	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Phosphosugar-binding transcriptional regulator, RpiR family	Phosphosugar-binding transcriptional regulator, RpiR family		Transcription	ATG	 
lmo0523	558037	558480	444	+	558037	558480	444	ORF	similar to B. subtilis YybC protein	hypothetical protein - RAST_Product: Permeases of the major facilitator superfamily	Permeases of the major facilitator superfamily		Not in COGs	ATG	 
lmo0524	558526	560187	1662	-	558526	560187	1662	ORF	similar to putative sulfate transporter	hypothetical protein - RAST_Product: Sulfate permease	Sulfate permease		Inorganic ion transport and metabolism	ATG	 
lmo0525	560443	561774	1332	+	560443	561774	1332	ORF	lmo0525	hypothetical protein - RAST_Product: putative exported protein	putative exported protein		Function unknown	ATG	 
lmo0526	561819	562559	741	-	561819	562559	741	ORF	similar to transcription regulator (TipA from Streptomyces coelicolor)	hypothetical protein - RAST_Product: Transcriptional regulator, MerR family	Transcriptional regulator, MerR family		Transcription	ATG	 
lmo0527	562789	564264	1476	+	562789	564264	1476	ORF		transmembrane protein	membrane protein	Operon_086	Not in COGs	ATG	 
lmo0528	564257	565753	1497	+	564257	565753	1497	ORF	hypothetical secreted protein	hypothetical protein - RAST_Product: hypothetical secreted protein	hypothetical secreted protein	Operon_086	Function unknown	ATG	 
lmo0529	565764	567014	1251	+	565764	567014	1251	ORF	conserved hypothetical protein similar to putative glucosaminyltransferase	hypothetical protein - RAST_Product: glycosyl transferase, group 2 family protein	glycosyl transferase, group 2 family protein	Operon_086	Cell wall/membrane biogenesis	ATG	 
lmo0530	567030	569081	2052	+	567030	569081	2052	ORF	lmo0530	hypothetical protein - RAST_Product: FIG00774209: hypothetical protein	FIG00774209: hypothetical protein	Operon_086	Not in COGs	ATG	 
lmo0531	569094	569948	855	+	569094	569948	855	ORF	lmo0531	hypothetical protein - RAST_Product: FIG00775065: hypothetical protein	FIG00775065: hypothetical protein	Operon_086	Signal transduction mechanisms	ATG	 
lmo0532	570008	570838	831	+	570008	570838	831	ORF	lmo0532	hypothetical protein - RAST_Product: FIG00774364: hypothetical protein	FIG00774364: hypothetical protein		"Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo0533	570916	571185	270	+	570916	571185	270	ORF	ACT domain-containing protein	hypothetical protein - RAST_Product: ACT domain protein	ACT domain protein	Operon_087	Signal transduction mechanisms	GTG	 
lmo0534	571204	572559	1356	+	571204	572559	1356	ORF		hypothetical protein - RAST_Product: FIG00774743: hypothetical protein	FIG00774743: hypothetical protein	Operon_087	Function unknown	ATG	 
lmo0535	572600	573568	969	-	572600	573568	969	ORF	similar to transcription regulator (LacI family)	hypothetical protein - RAST_Product: transcriptional regulator, LacI family	transcriptional regulator, LacI family		Transcription	TTG	 
lmo0536	573740	575062	1323	+	573740	575062	1323	ORF	similar to 6-phospho-beta-glucosidase	hypothetical protein - RAST_Product: 6-phospho-beta-glucosidase (EC 3.2.1.86)	6-phospho-beta-glucosidase (EC 3.2.1.86)		Carbohydrate transport and metabolism	ATG	 
lmo0537	575166	576437	1272	+	575166	576437	1272	ORF	"similar to N-carbamyl-L-amino acid amidohydrolase; allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide"	allantoate amidohydrolase	N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)	Operon_088	Amino acid transport and metabolism	ATG	 
lmo0538	576403	577584	1182	+	576403	577584	1182	ORF	similar to N-acyl-L-amino acid amidohydrolase	hypothetical protein - RAST_Product: Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A	Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A	Operon_088	General function prediction only	ATG	 
lmo0539	577632	578648	1017	-	577632	578648	1017	ORF	"similar to tagatose-1,6-diphosphate aldolase; catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources"	tagatose 1,6-diphosphate aldolase	Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)		Carbohydrate transport and metabolism	ATG	 
lmo0540	578886	580079	1194	+	578886	580079	1194	ORF	similar to penicillin-binding protein	hypothetical protein - RAST_Product: penicillin-binding protein, putative	penicillin-binding protein, putative		Defense/virulence mechanisms	ATG	 
lmo0541	580119	581039	921	-	580119	581039	921	ORF	similar to ABC transporter (binding protein)	hypothetical protein - RAST_Product: ABC transporter, substrate-binding protein	ABC transporter, substrate-binding protein		Inorganic ion transport and metabolism	ATG	 
lmo0542	581150	581500	351	-	581150	581500	351	ORF	similar to PTS system, glucitol/sorbitol-specific enzyme IIA component	hypothetical protein - RAST_Product: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)	PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0543	581519	582505	987	-	581519	582505	987	ORF	similar to PTS system, glucitol/sorbitol-specific enzyme IIBC component	hypothetical protein - RAST_Product: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)	PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0544	582526	583047	522	-	582526	583047	522	ORF	similar to PTS system, glucitol/sorbitol-specific enzyme II CII component	hypothetical protein - RAST_Product: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)	PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	GTG	 
lmo0545	583072	583452	381	-	583072	583452	381	ORF	lmo0545	hypothetical protein - RAST_Product: Glucitol operon activator protein	Glucitol operon activator protein		Transcription	ATG	 
lmo0546	583507	584757	1251	-	583507	584757	1251	ORF	similar to putative NAD(P)-dependent oxidoreductase	hypothetical protein - RAST_Product: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)		Amino acid transport and metabolism	ATG	 
lmo0547	585015	585962	948	-	585015	585962	948	ORF	similar to B. subtilis DeoR transcriptional regulator	hypothetical protein - RAST_Product: Sorbitol operon transcription regulator	Sorbitol operon transcription regulator		Transcription	ATG	 
lmo0548	586329	586994	666	+	586329	586994	666	ORF	lmo0548	hypothetical protein - RAST_Product: FIG00774388: hypothetical protein	FIG00774388: hypothetical protein		Signal transduction mechanisms	GTG	 
lmo0549	587012	589033	2022	+	587012	589033	2022	ORF	similar to internalin protein	hypothetical protein - RAST_Product: Internalin-like protein Lmo0549 homolog	Internalin-like protein Lmo0549 homolog		Function unknown	ATG	 
lmo0550	589066	589362	297	+	589066	589362	297	ORF		pepdidoglycan bound protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo0550 homolog		Not in COGs	TTG	 
lmo0551	589406	590248	843	+	589406	590248	843	ORF	lmo0551	hypothetical protein - RAST_Product: extracellular protein	extracellular protein		Not in COGs	ATG	 
lmo0552	590324	591355	1032	+	590324	591355	1032	ORF		hypothetical protein - RAST_Product: cell surface protein precursor	cell surface protein precursor		Not in COGs	TTG	 
lmo0553	591412	592047	636	-	591412	592047	636	ORF	lmo0553	hypothetical protein - RAST_Product: CBS domain protein	CBS domain protein		General function prediction only	ATG	 
lmo0554	592257	593438	1182	+	592257	593438	1182	ORF	similar to NADH-dependent butanol dehydrogenase	hypothetical protein - RAST_Product: NADH-dependent butanol dehydrogenase A (EC 1.1.1.-)	NADH-dependent butanol dehydrogenase A (EC 1.1.1.-)	Operon_089	Energy production and conversion	ATG	 
lmo0555	593528	595006	1479	+	593528	595006	1479	ORF	similar to di-tripeptide transporter	hypothetical protein - RAST_Product: Di/tripeptide permease DtpT	Di/tripeptide permease DtpT	Operon_089	Amino acid transport and metabolism	TTG	 
lmo0556	595135	595842	708	+	595135	595842	708	ORF	similar to phosphoglycerate mutase	hypothetical protein - RAST_Product: Phosphoglycerate mutase family, Lmo0556 homolog	Phosphoglycerate mutase family, Lmo0556 homolog	Operon_090	Carbohydrate transport and metabolism	ATG	 
lmo0557	595843	596538	696	+	595843	596538	696	ORF	similar to phosphoglycerate mutase	hypothetical protein - RAST_Product: Phosphoglycerate mutase family 1	Phosphoglycerate mutase family 1	Operon_090	Carbohydrate transport and metabolism	GTG	 
lmo0558	596580	597620	1041	-	596580	597620	1041	ORF		hypothetical protein - RAST_Product: 6-phosphogluconolactonase (EC 3.1.1.31)	6-phosphogluconolactonase (EC 3.1.1.31)		Carbohydrate transport and metabolism	ATG	 
lmo0559	598020	598925	906	+	598020	598925	906	ORF		hypothetical protein - RAST_Product: Magnesium and cobalt transport protein CorA	Magnesium and cobalt transport protein CorA		Inorganic ion transport and metabolism	ATG	 
lmo0560	598968	600344	1377	-	598968	600344	1377	ORF	"similar to NADP-specific glutamate dehydrogenase; converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer"	glutamate dehydrogenase	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)		Amino acid transport and metabolism	ATG	 
lmo0561	600837	601148	312	-	600837	601148	312	ORF	"similar to phosphorybosil-AMP-cyclohydrolase (HisI2 protein); catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis"	phosphoribosyl-ATP pyrophosphatase	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	Operon_091	Amino acid transport and metabolism	ATG	 
lmo0562	601149	601466	318	-	601149	601466	318	ORF	"similar to phosphoribosyl-AMP cyclohydrolase (HisI1 protein); PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers"	phosphoribosyl-AMP cyclohydrolase	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	Operon_091	Amino acid transport and metabolism	ATG	 
lmo0563	601463	602218	756	-	601463	602218	756	ORF	"highly similar to cyclase HisF; catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase"	imidazole glycerol phosphate synthase subunit HisF	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	Operon_091	Amino acid transport and metabolism	TTG	 
lmo0564	602208	602930	723	-	602208	602930	723	ORF	"highly similar to phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide"	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	Operon_091	Amino acid transport and metabolism	ATG	 
lmo0565	602909	603535	627	-	602909	603535	627	ORF	"similar to amidotransferases; with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide"	imidazole glycerol phosphate synthase subunit HisH	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	Operon_091	Amino acid transport and metabolism	ATG	 
lmo0566	603536	604120	585	-	603536	604120	585	ORF	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis	imidazoleglycerol-phosphate dehydratase	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	Operon_091	Amino acid transport and metabolism	ATG	 
lmo0567	604121	605404	1284	-	604121	605404	1284	ORF	"highly similar to histidinol dehydrogenases; catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer"	histidinol dehydrogenase	Histidinol dehydrogenase (EC 1.1.1.23)	Operon_091	Amino acid transport and metabolism	ATG	 
lmo0568	605401	606042	642	-	605401	606042	642	ORF	"similar to ATP phosphoribosyltransferase; short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ"	ATP phosphoribosyltransferase catalytic subunit	ATP phosphoribosyltransferase catalytic subunit (EC 2.4.2.17)	Operon_091	Amino acid transport and metabolism	ATG	 
lmo0569	606039	607220	1182	-	606039	607220	1182	ORF	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine	ATP phosphoribosyltransferase regulatory subunit	ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)	Operon_091	Amino acid transport and metabolism	ATG	 
lmo0570	607372	608199	828	+	607372	608199	828	ORF	"similar histidinol phosphate phosphatase; catalyzes the formation of L-histidinol from L-histidinol phosphate"	histidinol-phosphatase	Histidinol-phosphatase (EC 3.1.3.15)		"Amino acid transport and metabolism; General function prediction only;"	ATG	 
lmo0571	608184	608480	297	-	608184	608480	297	ORF	similar to methyltransferase	hypothetical protein - RAST_Product: methylated-DNA--protein-cysteine methyltransferase	methylated-DNA--protein-cysteine methyltransferase		Replication, recombination and repair	ATG	 
lmo0572	608557	609588	1032	+	608557	609588	1032	ORF	lmo0572	hypothetical protein - RAST_Product: FIG00774174: hypothetical protein	FIG00774174: hypothetical protein		Not in COGs	ATG	 
lmo0573	609629	610924	1296	-	609629	610924	1296	ORF		hypothetical protein - RAST_Product: xanthine/uracil permease family protein	xanthine/uracil permease family protein		General function prediction only	ATG	 
lmo0574	611240	612634	1395	+	611240	612634	1395	ORF	similar to beta-glucosidase	hypothetical protein - RAST_Product: Beta-glucosidase (EC 3.2.1.21)	Beta-glucosidase (EC 3.2.1.21)	Operon_092	Carbohydrate transport and metabolism	ATG	 
lmo0575	612678	613406	729	+	612678	613406	729	ORF	similar to transcription regulator GntR family	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Operon_092	Transcription	GTG	 
lmo0576	613836	615299	1464	+	613836	615299	1464	ORF	hypothetical cell wall associated protein	hypothetical protein - RAST_Product: cell wall surface anchor family protein	cell wall surface anchor family protein		Not in COGs	ATG	 
lmo0577	615353	615811	459	-	615353	615811	459	ORF	lmo0577	hypothetical protein - RAST_Product: Integral membrane protein	Integral membrane protein	Operon_093	Function unknown	ATG	 
lmo0578	615825	616577	753	-	615825	616577	753	ORF		hypothetical protein - RAST_Product: FIG00774224: hypothetical protein	FIG00774224: hypothetical protein	Operon_093	Function unknown	ATG	 
lmo0579	616742	616951	210	+	616742	616951	210	ORF		hypothetical protein - RAST_Product: bacterial seryl-tRNA synthetase related	bacterial seryl-tRNA synthetase related	Operon_094	Function unknown	TTG	 
lmo0580	616973	617629	657	+	616973	617629	657	ORF	weakly similar to carboxylesterase	hypothetical protein	phospholipase/carboxylesterase family protein	Operon_094	General function prediction only	ATG	 
lmo0581	617660	618844	1185	-	617660	618844	1185	ORF		hypothetical protein - RAST_Product: LSU m5C1962 methyltransferase RlmI	LSU m5C1962 methyltransferase RlmI		General function prediction only	ATG	 
lmo0582	618932	620380	1449	-	618932	620380	1449	ORF	"iap; p60; autolytic enzyme; can cleave bacterial peptidoglycan; secreted by SecA2 system"	invasion associated secreted endopeptidase	NLP/P60 family protein		Cell wall/membrane biogenesis	ATG	 
lmo0583	620805	623135	2331	+	620805	623135	2331	ORF	"similar to preprotein translocase SecA subunit; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins"	preprotein translocase subunit SecA	Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)		Intracellular trafficking and secretion	ATG	 
lmo0584	623251	624423	1173	+	623251	624423	1173	ORF		hypothetical protein - RAST_Product: FIG00774156: hypothetical protein	FIG00774156: hypothetical protein		General function prediction only	GTG	 
lmo0585	624682	625395	714	+	624682	625395	714	ORF		putative secreted protein	extracellular protein		Not in COGs	ATG	 
lmo0586	625463	626488	1026	+	625463	626488	1026	ORF	lmo0586	hypothetical protein - RAST_Product: cell surface protein precursor	cell surface protein precursor		Not in COGs	TTG	 
lmo0587	626506	628971	2466	+	626506	628971	2466	ORF		putative secreted protein	cell surface protein precursor		Not in COGs	GTG	 
lmo0588	629088	630491	1404	+	629088	630491	1404	ORF	similar to DNA photolyase	hypothetical protein - RAST_Product: Deoxyribodipyrimidine photolyase (EC 4.1.99.3)	Deoxyribodipyrimidine photolyase (EC 4.1.99.3)		Replication, recombination and repair	ATG	 
lmo0589	630629	631042	414	+	630629	631042	414	ORF	lmo0589	hypothetical protein - RAST_Product: FIG00774318: hypothetical protein	FIG00774318: hypothetical protein	Operon_095	Function unknown	ATG	 
lmo0590	631045	632811	1767	+	631045	632811	1767	ORF	similar to a fusion of two types of conserved hypothetical proteinconserved hypothetical	hypothetical protein	Dihydroxyacetone kinase family protein	Operon_095	"General function prediction only; Function unknown;"	ATG	 
lmo0591	632811	633581	771	+	632811	633581	771	ORF	similar to unknown membrane proteins	hypothetical protein - RAST_Product: FIG00775146: hypothetical protein	FIG00775146: hypothetical protein	Operon_095	Function unknown	ATG	 
lmo0592	633709	634251	543	+	633709	634251	543	ORF	lmo0592	hypothetical protein - RAST_Product: FIG00774285: hypothetical protein	FIG00774285: hypothetical protein		Not in COGs	ATG	 
lmo0593	634479	635279	801	+	634479	635279	801	ORF	similar to transport proteins (formate?)	hypothetical protein - RAST_Product: formate/nitrite transporter family protein	formate/nitrite transporter family protein		Inorganic ion transport and metabolism	TTG	 
lmo0594	635317	636423	1107	-	635317	636423	1107	ORF	"similar to homoserine O-acetyltransferase; Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine"	homoserine O-acetyltransferase	Homoserine O-acetyltransferase (EC 2.3.1.31)	Operon_096	Amino acid transport and metabolism	GTG	 
lmo0595	636440	637717	1278	-	636440	637717	1278	ORF	similar to O-acetylhomoserine sulfhydrylase	hypothetical protein - RAST_Product: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)	Operon_096	Amino acid transport and metabolism	ATG	 
lmo0596	638165	638692	528	+	638165	638692	528	ORF		hypothetical protein - RAST_Product: FIG00774040: hypothetical protein	FIG00774040: hypothetical protein		Function unknown	ATG	 
lmo0597	638781	639482	702	-	638781	639482	702	ORF	similar to transcription regulator CRP/FNR family	hypothetical protein - RAST_Product: cyclic nucleotide-binding protein	cyclic nucleotide-binding protein		Signal transduction mechanisms	ATG	 
lmo0599	640300	640632	333	+	640300	640632	333	ORF		hypothetical protein - RAST_Product: Transcriptional regulator, PadR family	Transcriptional regulator, PadR family	Operon_098	Transcription	ATG	 
lmo0600	640625	641215	591	+	640625	641215	591	ORF	lmo0600	hypothetical protein - RAST_Product: FIG00774777: hypothetical protein	FIG00774777: hypothetical protein	Operon_098	Function unknown	ATG	 
lmo0601	641208	642308	1101	+	641208	642308	1101	ORF	similar to cell surface protein	hypothetical protein - RAST_Product: FIG00774809: hypothetical protein	FIG00774809: hypothetical protein	Operon_098	Function unknown	ATG	 
lmo0602	642414	642914	501	+	642414	642914	501	ORF	weakly similar to transcription regulator	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family		"Transcription; General function prediction only;"	ATG	 
lmo0603	642962	643348	387	-	642962	643348	387	ORF	lmo0603	hypothetical protein - RAST_Product: FIG00774465: hypothetical protein	FIG00774465: hypothetical protein		Not in COGs	ATG	 
lmo0604	643400	643744	345	-	643400	643744	345	ORF	similar to B. subtilis YvlA protein	hypothetical protein - RAST_Product: FIG00775072: hypothetical protein	FIG00775072: hypothetical protein		Not in COGs	ATG	 
lmo0605	643891	645231	1341	-	643891	645231	1341	ORF		hypothetical protein - RAST_Product: Na+ driven multidrug efflux pump	Na+ driven multidrug efflux pump		Defense/virulence mechanisms	GTG	 
lmo0606	645397	645858	462	+	645397	645858	462	ORF	similar to transcription regulator MarR family	hypothetical protein	Transcriptional regulator, MarR family	Operon_099	Transcription	ATG	 
lmo0607	645878	647590	1713	+	645878	647590	1713	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein	Lipid A export ATP-binding/permease protein MsbA	Operon_099	Defense/virulence mechanisms	ATG	 
lmo0608	647587	649404	1818	+	647587	649404	1818	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Lipid A export ATP-binding/permease protein MsbA	Lipid A export ATP-binding/permease protein MsbA	Operon_099	Defense/virulence mechanisms	ATG	 
lmo0609	649520	649819	300	+	649520	649819	300	ORF	similar to E. coli phage shock protein E	hypothetical protein - RAST_Product: Rhodanese-like domain protein	Rhodanese-like domain protein		Inorganic ion transport and metabolism	ATG	 
lmo0610	649864	651633	1770	-	649864	651633	1770	ORF	similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo0610 homolog	Internalin-like protein (LPXTG motif) Lmo0610 homolog		"General function prediction only; Function unknown;"	ATG	 
lmo0611	651794	652420	627	-	651794	652420	627	ORF	"similar to acyl-carrier protein phosphodiesterase and NAD(P)H dehydrogenase; FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds"	azoreductase	FMN-dependent NADH-azoreductase		Lipid transport and metabolism	ATG	 
lmo0612	652589	653044	456	+	652589	653044	456	ORF	similar to transcription regulator MarR family	hypothetical protein	Transcriptional regulator, MarR family	Operon_100	Transcription	ATG	 
lmo0613	653041	653982	942	+	653041	653982	942	ORF	similar to oxidoreductase	"hypothetical protein - RAST_Product: Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase"	"Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase"	Operon_100	"Energy production and conversion; General function prediction only;"	ATG	 
lmo0614	654078	654611	534	+	654078	654611	534	ORF		hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family		"Transcription; General function prediction only;"	ATG	 
lmo0615	654608	654850	243	-	654608	654850	243	ORF	lmo0615	hypothetical protein	FIG00774935: hypothetical protein		Not in COGs	ATG	 
lmo0616	654957	656708	1752	+	654957	656708	1752	ORF		glycerophosphoryl diester phosphodiesterase	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)		Energy production and conversion	ATG	 
lmo0617	656749	657243	495	-	656749	657243	495	ORF	lmo0617	hypothetical protein - RAST_Product: FIG00774897: hypothetical protein	FIG00774897: hypothetical protein		Not in COGs	ATG	 
lmo0618	657323	658465	1143	-	657323	658465	1143	ORF	similar to protein kinase	hypothetical protein - RAST_Product: Probable serine/threonine-protein kinase pknB (EC 2.7.11.1)	Probable serine/threonine-protein kinase pknB (EC 2.7.11.1)		"General function prediction only; Signal transduction mechanisms; Transcription; Replication, recombination and repair;"	ATG	 
lmo0619	658572	659027	456	+	658572	659027	456	ORF	lmo0619	hypothetical protein - RAST_Product: FIG00774226: hypothetical protein	FIG00774226: hypothetical protein		Energy production and conversion	ATG	 
lmo0620	659083	659475	393	+	659083	659475	393	ORF	lmo0620	hypothetical protein - RAST_Product: FIG00774170: hypothetical protein	FIG00774170: hypothetical protein		General function prediction only	ATG	 
lmo0621	659572	660312	741	+	659572	660312	741	ORF		hypothetical protein - RAST_Product: FIG00774066: hypothetical protein	FIG00774066: hypothetical protein		General function prediction only	ATG	 
lmo0622	660398	660676	279	+	660398	660676	279	ORF		hypothetical protein - RAST_Product: FIG00774605: hypothetical protein	FIG00774605: hypothetical protein	Operon_101	Not in COGs	ATG	 
lmo0623	660692	660958	267	+	660692	660958	267	ORF	lmo0623	hypothetical protein - RAST_Product: FIG00774188: hypothetical protein	FIG00774188: hypothetical protein	Operon_101	Not in COGs	ATG	 
lmo0624	660996	661439	444	-	660996	661439	444	ORF		hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_102	"Transcription; General function prediction only;"	ATG	 
lmo0625	661470	662171	702	-	661470	662171	702	ORF	lmo0625	hypothetical protein - RAST_Product: FIG00774080: hypothetical protein	FIG00774080: hypothetical protein	Operon_102	Amino acid transport and metabolism	ATG	 
lmo0626	662257	663936	1680	-	662257	663936	1680	ORF		hypothetical protein - RAST_Product: FIG00774350: hypothetical protein	FIG00774350: hypothetical protein		Not in COGs	ATG	 
lmo0627	664242	668990	4749	+	664242	668990	4749	ORF		pepdidoglycan bound protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo0627 homolog		Not in COGs	ATG	 
lmo0628	669086	669361	276	+	669086	669361	276	ORF	lmo0628	hypothetical protein	FIG00774122: hypothetical protein	Operon_103	Not in COGs	ATG	 
lmo0629	669423	669950	528	+	669423	669950	528	ORF	lmo0629	hypothetical protein - RAST_Product: Isochorismatase (EC 3.3.2.1)	Isochorismatase (EC 3.3.2.1)	Operon_103	Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo0630	670309	672339	2031	+	670309	672339	2031	ORF	similar to transcription antiterminator BglG family	hypothetical protein - RAST_Product: PTS system IIA 2 domain protein	PTS system IIA 2 domain protein		"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0631	672341	672793	453	+	672341	672793	453	ORF	similar to PTS system, fructose-specific IIA component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIA component (EC 2.7.1.69)	PTS system, fructose-specific IIA component (EC 2.7.1.69)		"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0632	672794	673855	1062	+	672794	673855	1062	ORF	"similar to PTS system, fructose-specific IIC component; FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site"	putative fructose-like permease EIIC subunit 2	PTS system, fructose-specific IIC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0633	673870	674178	309	+	673870	674178	309	ORF	"similar to PTS system, fructose-specific IIB component; FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS"	putative PTS system fructose-like transporter subunit EIIB	PTS system, fructose-specific IIB component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0634	674205	675473	1269	+	674205	675473	1269	ORF	similar to an E. coli putative tagatose 6-phosphate kinase	hypothetical protein - RAST_Product: FIG00774563: hypothetical protein	FIG00774563: hypothetical protein		Carbohydrate transport and metabolism	TTG	 
lmo0635	675563	676267	705	+	675563	676267	705	ORF	lmo0635	hypothetical protein - RAST_Product: 2-haloalkanoic acid dehalogenase (EC 3.8.1.2)	2-haloalkanoic acid dehalogenase (EC 3.8.1.2)		General function prediction only	ATG	 
lmo0636	676372	676788	417	+	676372	676788	417	ORF		hypothetical protein - RAST_Product: Rrf2 family transcriptional regulator	Rrf2 family transcriptional regulator	Operon_104	Transcription	ATG	 
lmo0637	676802	677395	594	+	676802	677395	594	ORF	weakly similar to methyltransferase	hypothetical protein - RAST_Product: 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.-)	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.-)	Operon_104	"Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo0638	678494	679123	630	+	678494	679123	630	ORF	lmo0638	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0639	679763	680296	534	+	679763	680296	534	ORF	similar to a transcription regulator (surface protein PAg negative regulator par)	hypothetical protein - RAST_Product: transcriptional regulator	transcriptional regulator		Not in COGs	ATG	 
lmo0640	680360	681277	918	+	680360	681277	918	ORF	similar to oxidoreductase	hypothetical protein	Oxidoreductase, aldo/keto reductase family		General function prediction only	TTG	 
lmo0641	681543	683423	1881	+	681543	683423	1881	ORF	similar to heavy metal-transporting ATPase	"hypothetical protein - RAST_Product: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)"	"Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)"		Inorganic ion transport and metabolism	ATG	 
lmo0642	683519	684247	729	+	683519	684247	729	ORF	lmo0642	hypothetical protein - RAST_Product: membrane protein	membrane protein		Not in COGs	ATG	 
lmo0643	684390	685040	651	+	684390	685040	651	ORF	similar to putative transaldolase	hypothetical protein - RAST_Product: Transaldolase (EC 2.2.1.2)	Transaldolase (EC 2.2.1.2)		Carbohydrate transport and metabolism	ATG	 
lmo0644	685083	686903	1821	-	685083	686903	1821	ORF		hypothetical protein - RAST_Product: Lipoteichoic acid primase LtaP	Lipoteichoic acid primase LtaP		Cell wall/membrane biogenesis	TTG	 
lmo0645	687138	688529	1392	+	687138	688529	1392	ORF	similar to amino acid transporter	hypothetical protein - RAST_Product: Amino acid permease	Amino acid permease		Amino acid transport and metabolism	ATG	 
lmo0646	688619	689458	840	+	688619	689458	840	ORF		hypothetical protein - RAST_Product: Glyoxalase family protein	Glyoxalase family protein		General function prediction only	ATG	 
lmo0647	689541	689825	285	-	689541	689825	285	ORF	lmo0647	hypothetical protein - RAST_Product: FIG00774323: hypothetical protein	FIG00774323: hypothetical protein		Not in COGs	ATG	 
lmo0648	689923	690873	951	+	689923	690873	951	ORF	similar to membrane proteins	hypothetical protein - RAST_Product: Magnesium and cobalt transport protein CorA	Magnesium and cobalt transport protein CorA	Operon_105	Inorganic ion transport and metabolism	ATG	 
lmo0649	690897	691538	642	+	690897	691538	642	ORF	similar to transcription regulators	hypothetical protein - RAST_Product: transcriptional regulator, GntR family	transcriptional regulator, GntR family	Operon_105	Transcription	ATG	 
lmo0650	691581	694271	2691	+	691581	694271	2691	ORF		hypothetical protein - RAST_Product: phage infection protein	phage infection protein	Operon_105	Function unknown	ATG	 
lmo0651	694317	694964	648	+	694317	694964	648	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Operon_105	Transcription	GTG	 
lmo0652	694973	695509	537	-	694973	695509	537	ORF		hypothetical protein	acetyltransferase, GNAT family		"Transcription; General function prediction only;"	ATG	 
lmo0653	695496	696416	921	-	695496	696416	921	ORF	lmo0653	hypothetical protein	FIG00774864: hypothetical protein		Function unknown	ATG	 
lmo0654	696606	696815	210	+	696606	696815	210	ORF	lmo0654	hypothetical protein - RAST_Product: FIG00774719: hypothetical protein	FIG00774719: hypothetical protein		Not in COGs	ATG	 
lmo0655	696883	697590	708	+	696883	697590	708	ORF	similar to phosphoprotein phosphatases	hypothetical protein - RAST_Product: Serine/threonine protein phosphatase (EC 3.1.3.16)	Serine/threonine protein phosphatase (EC 3.1.3.16)		Signal transduction mechanisms	ATG	 
lmo0656	697634	698197	564	-	697634	698197	564	ORF		hypothetical protein - RAST_Product: FIG00774201: hypothetical protein	FIG00774201: hypothetical protein		Function unknown	ATG	 
lmo0657	698317	698733	417	+	698317	698733	417	ORF	lmo0657	hypothetical protein - RAST_Product: FIG00774771: hypothetical protein	FIG00774771: hypothetical protein	Operon_106	Not in COGs	ATG	 
lmo0658	698785	699420	636	+	698785	699420	636	ORF		hypothetical protein - RAST_Product: endonuclease III domain protein	endonuclease III domain protein	Operon_106	Replication, recombination and repair	GTG	 
lmo0659	699410	700306	897	-	699410	700306	897	ORF	similar to transcription regulator (Rgg type)	hypothetical protein - RAST_Product: Transcriptional regulator, MutR family	Transcriptional regulator, MutR family		Transcription	ATG	 
lmo0660	700537	700821	285	+	700537	700821	285	ORF	similar to transposases	hypothetical protein - RAST_Product: transposase OrfA, IS3 family, putative, POINT MUTATION	transposase OrfA, IS3 family, putative, POINT MUTATION		Replication, recombination and repair	ATG	 
lmo0661	700876	701184	309	-	700876	701184	309	ORF		hypothetical protein - RAST_Product: carboxymuconolactone decarboxylase family protein	carboxymuconolactone decarboxylase family protein		Function unknown	ATG	 
lmo0662	701247	702062	816	-	701247	702062	816	ORF	highly similar to phosphomethylpyrimidine kinase thiD	hypothetical protein - RAST_Product: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Operon_107	Coenzyme transport and metabolism	ATG	 
lmo0663	702088	702954	867	-	702088	702954	867	ORF		hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_107	General function prediction only	ATG	 
lmo0664	703128	703691	564	+	703128	703691	564	ORF	similar to acetyl transferase	hypothetical protein - RAST_Product: Maltose O-acetyltransferase (EC 2.3.1.79)	Maltose O-acetyltransferase (EC 2.3.1.79)	Operon_108	General function prediction only	ATG	 
lmo0665	703688	703951	264	+	703688	703951	264	ORF	lmo0665	hypothetical protein - RAST_Product: FIG00774267: hypothetical protein	FIG00774267: hypothetical protein	Operon_108	Not in COGs	ATG	 
lmo0666	703961	704338	378	+	703961	704338	378	ORF		hypothetical protein - RAST_Product: COG2363	COG2363	Operon_108	Function unknown	ATG	 
lmo0667	704452	705387	936	+	704452	705387	936	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein		Defense/virulence mechanisms	ATG	 
lmo0668	705380	706150	771	+	705380	706150	771	ORF	similar to putative ABC transporter, permease protein	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein		Defense/virulence mechanisms	ATG	 
lmo0669	706408	707292	885	+	706408	707292	885	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: oxidoreductase, short-chain dehydrogenase/reductase family	oxidoreductase, short-chain dehydrogenase/reductase family	Operon_109	"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo0670	707310	707486	177	+	707310	707486	177	ORF	lmo0670	hypothetical protein - RAST_Product: FIG00774340: hypothetical protein	FIG00774340: hypothetical protein	Operon_109	Function unknown	GTG	 
lmo0671	707612	708220	609	+	707612	708220	609	ORF	lmo0671	hypothetical protein - RAST_Product: FIG00775084: hypothetical protein	FIG00775084: hypothetical protein		Not in COGs	ATG	 
lmo0672	709134	709562	429	+	709134	709562	429	ORF		hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Function unknown	ATG	 
lmo0673	709601	709810	210	-	709601	709810	210	ORF	lmo0673	hypothetical protein - RAST_Product: FIG00774179: hypothetical protein	FIG00774179: hypothetical protein	Operon_110	Not in COGs	ATG	 
lmo0674	709829	710749	921	-	709829	710749	921	ORF	lmo0674	hypothetical protein - RAST_Product: Motility gene repressor MogR # frameshift	Motility gene repressor MogR # frameshift	Operon_110	Transcription	ATG	 
lmo0675	711121	711435	315	+	711121	711435	315	ORF	lmo0675	hypothetical protein - RAST_Product: Flagellar motor switch protein FliN	Flagellar motor switch protein FliN	Operon_111	Not in COGs	ATG	 
lmo0676	711428	712195	768	+	711428	712195	768	ORF	"similar to flagellar biosynthesic protein FliP; FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus"	flagellar biosynthesis protein FliP	Flagellar biosynthesis protein FliP	Operon_111	"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo0677	712208	712480	273	+	712208	712480	273	ORF	"similar to flagellar biosynthesis protein FliQ; with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus"	flagellar biosynthesis protein FliQ	Flagellar biosynthesis protein FliQ	Operon_111	"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo0678	712483	713244	762	+	712483	713244	762	ORF	"similar to flagellar biosynthetic protein FliR; FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus"	flagellar biosynthesis protein FliR	Flagellar biosynthesis protein FliR	Operon_111	"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo0679	713260	714306	1047	+	713260	714306	1047	ORF	"similar to flagellar biosynthetic protein flhB; membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export"	flagellar biosynthesis protein FlhB	Flagellar biosynthesis protein FlhB	Operon_111	"Cell motility; Intracellular trafficking and secretion;"	TTG	 
lmo0680	714353	716428	2076	+	714353	716428	2076	ORF	"similar to flagella-associated protein flhA; membrane protein involved in the flagellar export apparatus"	flagellar biosynthesis protein FlhA	Flagellar biosynthesis protein FlhA	Operon_111	"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo0681	716450	717673	1224	+	716450	717673	1224	ORF	"similar to flagellar biosynthesis protein FlhF; Positive regulator of class III flagellar genes"	flagellar biosynthesis regulator FlhF	Flagellar biosynthesis protein FlhF	Operon_111	Cell motility	ATG	 
lmo0682	717670	718449	780	+	717670	718449	780	ORF	"similar to flagellar hook-basal body protein FlgG; makes up the distal portion of the flagellar basal body rod"	flagellar basal body rod protein FlgG	Flagellar basal-body rod protein FlgG	Operon_111	Cell motility	ATG	 
lmo0683	718478	719266	789	+	718478	719266	789	ORF	similar to chemotactic methyltransferase CheR	hypothetical protein - RAST_Product: Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)	Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)	Operon_111	"Cell motility; Signal transduction mechanisms;"	ATG	 
lmo0684	719291	719626	336	+	719291	719626	336	ORF	lmo0684	hypothetical protein - RAST_Product: FIG00774517: hypothetical protein	FIG00774517: hypothetical protein	Operon_111	Not in COGs	ATG	 
lmo0685	719653	720504	852	+	719653	720504	852	ORF	"similar to motility protein (flagellar motor rotation) MotA; With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine"	flagellar motor protein MotA	Flagellar motor rotation protein MotA	Operon_111	Cell motility	GTG	 
lmo0686	720464	721291	828	+	720464	721291	828	ORF	similar to motility protein (flagellar motor rotation) MotB	hypothetical protein - RAST_Product: Flagellar motor rotation protein MotB	Flagellar motor rotation protein MotB	Operon_111	Cell motility	GTG	 
lmo0687	721301	721801	501	+	721301	721801	501	ORF	lmo0687	hypothetical protein - RAST_Product: FIG00774408: hypothetical protein	FIG00774408: hypothetical protein	Operon_111	Not in COGs	TTG	 
lmo0688	721824	723737	1914	+	721824	723737	1914	ORF		hypothetical protein - RAST_Product: glycosyl transferase, group 2 family protein	glycosyl transferase, group 2 family protein	Operon_111	"Cell wall/membrane biogenesis; General function prediction only;"	ATG	 
lmo0689	723750	724658	909	+	723750	724658	909	ORF	similar to CheA activity-modulating chemotaxis protein CheV	hypothetical protein - RAST_Product: Chemotaxis protein CheV (EC 2.7.3.-)	Chemotaxis protein CheV (EC 2.7.3.-)	Operon_111	"Cell motility; Signal transduction mechanisms;"	ATG	 
lmo0690	724896	725759	864	+	724896	725759	864	ORF	structural flagella protein	flagellin	Flagellin protein FlaA		Cell motility	ATG	 
lmo0691	726034	726393	360	+	726034	726393	360	ORF		chemotaxis response regulator CheY	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	Operon_112	Signal transduction mechanisms	ATG	 
lmo0692	726413	728269	1857	+	726413	728269	1857	ORF		two-component sensor histidine kinase CheA	Signal transduction histidine kinase CheA (EC 2.7.3.-)	Operon_112	"Cell motility; Signal transduction mechanisms;"	ATG	 
lmo0693	728282	728581	300	+	728282	728581	300	ORF	similar to flagellar motor switch protein fliY C-terminal part	flagellar motor switch protein	Flagellar motor switch protein FliN	Operon_112	"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo0694	728600	729010	411	+	728600	729010	411	ORF	lmo0694	hypothetical protein - RAST_Product: FIG00774728: hypothetical protein	FIG00774728: hypothetical protein	Operon_112	Not in COGs	TTG	 
lmo0695	729026	730072	1047	+	729026	730072	1047	ORF	lmo0695	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_112	Cell motility	ATG	 
lmo0696	730074	730496	423	+	730074	730496	423	ORF	"similar to flagellar hook assembly protein; acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod"	flagellar basal body rod modification protein	Flagellar basal-body rod modification protein FlgD	Operon_112	Cell motility	TTG	 
lmo0697	730516	731751	1236	+	730516	731751	1236	ORF	"similar to flagellar hook protein FlgE; the hook connects flagellar basal body to the flagellar filament"	flagellar hook protein FlgE	Flagellar hook protein FlgE	Operon_112	Cell motility	ATG	 
lmo0698	731765	732001	237	+	731765	732001	237	ORF	"weakly similar to flagellar switch protein; One of three proteins involved in switching the direction of the flagellar rotation"	flagellar motor switch protein	Flagellar motor switch protein FliN	Operon_112	"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo0699	732022	733014	993	+	732022	733014	993	ORF	"similar to flagellar switch protein FliM; with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation"	flagellar motor switch protein FliM	Flagellar motor switch protein FliM	Operon_112	Cell motility	ATG	 
lmo0700	733017	734564	1548	+	733017	734564	1548	ORF	"similar to flagellar motor switch protein fliY; One of three proteins involved in switching the direction of the flagellar rotation"	flagellar motor switch protein	Flagellar motor switch protein FliN	Operon_112	"Cell motility; Intracellular trafficking and secretion; Signal transduction mechanisms;"	GTG	 
lmo0701	734570	735973	1404	+	734570	735973	1404	ORF	lmo0701	hypothetical protein - RAST_Product: FIG00774560: hypothetical protein	FIG00774560: hypothetical protein	Operon_112	Not in COGs	GTG	 
lmo0702	735996	737162	1167	+	735996	737162	1167	ORF	lmo0702	hypothetical protein - RAST_Product: FIG00774477: hypothetical protein	FIG00774477: hypothetical protein	Operon_112	Function unknown	ATG	 
lmo0703	737269	737733	465	+	737269	737733	465	ORF	lmo0703	hypothetical protein - RAST_Product: UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	Operon_112	Not in COGs	ATG	 
lmo0704	737743	738171	429	+	737743	738171	429	ORF	lmo0704	hypothetical protein - RAST_Product: FIG00774686: hypothetical protein	FIG00774686: hypothetical protein	Operon_112	Not in COGs	ATG	 
lmo0705	738191	739711	1521	+	738191	739711	1521	ORF	"similar to flagellar hook-associated protein FlgK; with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook"	flagellar hook-associated protein FlgK	Flagellar hook-associated protein FlgK	Operon_112	Cell motility	GTG	 
lmo0706	739723	740598	876	+	739723	740598	876	ORF	"similar to flagellar hook-associated protein 3 FlgL; with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook"	flagellar hook-associated protein FlgL	Flagellar hook-associated protein FlgL	Operon_112	Cell motility	ATG	 
lmo0707	740610	741899	1290	+	740610	741899	1290	ORF	"similar to flagellar hook-associated protein 2 FliD; involved in flagellin assembly"	flagellar capping protein	Flagellar hook-associated protein FliD	Operon_112	Cell motility	GTG	 
lmo0708	741918	742304	387	+	741918	742304	387	ORF	similar to hypothetical flagellar protein	hypothetical protein - RAST_Product: Flagellar biosynthesis protein FliS	Flagellar biosynthesis protein FliS	Operon_112	"Cell motility; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking and secretion;"	ATG	 
lmo0709	742276	742557	282	+	742276	742557	282	ORF	lmo0709	hypothetical protein - RAST_Product: FIG00774899: hypothetical protein	FIG00774899: hypothetical protein	Operon_112	Not in COGs	ATG	 
lmo0710	742578	742979	402	+	742578	742979	402	ORF	"similar to flagellar basal-body rod protein flgB; with FlgF and C makes up the proximal portion of the flagellar basal body rod"	flagellar basal body rod protein FlgB	Flagellar basal-body rod protein FlgB	Operon_112	Cell motility	GTG	 
lmo0711	742991	743401	411	+	742991	743401	411	ORF	"similar to flagellar basal-body rod protein flgC; with FlgF and B makes up the proximal portion of the flagellar basal body rod"	flagellar basal body rod protein FlgC	Flagellar basal-body rod protein FlgC	Operon_112	Cell motility	ATG	 
lmo0712	743418	743714	297	+	743418	743714	297	ORF	"similar to flagellar hook-basal body complex protein FliE; forms a junction between the M-ring and FlgB during flagella biosynthesis"	flagellar hook-basal body protein FliE	Flagellar hook-basal body complex protein FliE	Operon_112	"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo0713	743782	745434	1653	+	743782	745434	1653	ORF	"similar to flagellar basal-body M-ring protein fliF; the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod"	flagellar MS-ring protein	Flagellar M-ring protein FliF	Operon_112	"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo0714	745437	746543	1107	+	745437	746543	1107	ORF	"similar to flagellar motor switch protein fliG; One of three proteins involved in switching the direction of the flagellar rotation"	flagellar motor switch protein G	Flagellar motor switch protein FliG	Operon_112	Cell motility	ATG	 
lmo0715	746530	747222	693	+	746530	747222	693	ORF	"lmo0715; binds to and inhibits the function of flagella specific ATPase FliI"	flagellar assembly protein H	Flagellar assembly protein FliH	Operon_112	Not in COGs	ATG	 
lmo0716	747219	748520	1302	+	747219	748520	1302	ORF	"similar to H+-transporting ATP synthase alpha chain FliI, flagellar-specific, -; involved in type III protein export during flagellum assembly"	flagellum-specific ATP synthase	Flagellum-specific ATP synthase FliI	Operon_112	"Cell motility; Intracellular trafficking and secretion;"	GTG	 
lmo0717	748537	749205	669	+	748537	749205	669	ORF	similar to transglycosylase	hypothetical protein - RAST_Product: Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	Operon_112	Cell wall/membrane biogenesis	ATG	 
lmo0718	749219	749863	645	+	749219	749863	645	ORF	lmo0718	hypothetical protein - RAST_Product: FIG00774152: hypothetical protein	FIG00774152: hypothetical protein	Operon_112	Not in COGs	ATG	 
lmo0719	749985	750311	327	+	749985	750311	327	ORF		hypothetical protein - RAST_Product: Transcriptional regulator, PadR family	Transcriptional regulator, PadR family	Operon_113	Transcription	ATG	 
lmo0720	750311	750634	324	+	750311	750634	324	ORF	lmo0720	hypothetical protein - RAST_Product: FIG00774400: hypothetical protein	FIG00774400: hypothetical protein	Operon_113	Function unknown	ATG	 
lmo0721	750680	751327	648	-	750680	751327	648	ORF		putative fibronectin-binding protein	fibronectin-binding protein		Not in COGs	ATG	 
lmo0722	751598	753328	1731	+	751598	753328	1731	ORF	"similar to pyruvate oxidase; catalyzes the formation of acetyl phosphate from pyruvate"	pyruvate oxidase	Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)		"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo0723	753490	755295	1806	+	753490	755295	1806	ORF	similar to metyl-accepting chemotaxis protein	hypothetical protein - RAST_Product: methyl-accepting chemotaxis protein	methyl-accepting chemotaxis protein	Operon_114	"Cell motility; Signal transduction mechanisms;"	GTG	 
lmo0724	755308	756036	729	+	755308	756036	729	ORF	similar to B. subtilis YvpB protein	hypothetical protein - RAST_Product: FIG00774329: hypothetical protein	FIG00774329: hypothetical protein	Operon_114	Function unknown	ATG	 
lmo0725	756079	756291	213	-	756079	756291	213	ORF		peptidoglycan binding protein	putative peptidoglycan bound protein (LPXTG motif)		Not in COGs	ATG	 
lmo0726	756494	756637	144	+	756494	756637	144	ORF		hypothetical protein			Not in COGs	ATG	 
lmo0727	756738	758543	1806	+	756738	758543	1806	ORF	"similar to L-glutamine-D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source"	glucosamine--fructose-6-phosphate aminotransferase	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)		Cell wall/membrane biogenesis	ATG	 
lmo0728	758656	759396	741	+	758656	759396	741	ORF	similar to riboflavin kinase / FAD synthase	hypothetical protein - RAST_Product: Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2)	Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2)		Coenzyme transport and metabolism	ATG	 
lmo0729	759479	759958	480	+	759479	759958	480	ORF	lmo0729	hypothetical protein - RAST_Product: FIG00774776: hypothetical protein	FIG00774776: hypothetical protein	Operon_115	Not in COGs	ATG	 
lmo0730	759972	760310	339	+	759972	760310	339	ORF	lmo0730	hypothetical protein - RAST_Product: FIG00774098: hypothetical protein	FIG00774098: hypothetical protein	Operon_115	Not in COGs	ATG	 
lmo0731	760455	760859	405	+	760455	760859	405	ORF	lmo0731	hypothetical protein - RAST_Product: FIG00774429: hypothetical protein	FIG00774429: hypothetical protein		Not in COGs	ATG	 
lmo0732	761552	763468	1917	+	761552	763468	1917	ORF		peptidoglycan binding protein	Internalin-like protein (LPXTG motif) Lmo0732 homolog		Function unknown	ATG	 
lmo0733	763798	764307	510	+	763798	764307	510	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, XRE family	Transcriptional regulator, XRE family		Transcription	ATG	 
lmo0734	764465	765469	1005	-	764465	765469	1005	ORF	similar to transcriptional regulator (LacI family)	hypothetical protein - RAST_Product: Transcriptional regulator of D-allose utilization, LacI family	Transcriptional regulator of D-allose utilization, LacI family		Transcription	ATG	 
lmo0735	765683	766354	672	+	765683	766354	672	ORF	similar to Ribulose-5-Phosphate 3-Epimerase	hypothetical protein - RAST_Product: D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-), row_id 846	D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-), row_id 846	Operon_116	Carbohydrate transport and metabolism	ATG	 
lmo0736	766351	766797	447	+	766351	766797	447	ORF	"similar to ribose 5-phosphate isomerase; catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity"	ribose-5-phosphate isomerase B	D-allose-6-phosphate isomerase (EC 5.3.1.-)	Operon_116	Carbohydrate transport and metabolism	ATG	 
lmo0737	766810	767742	933	+	766810	767742	933	ORF	lmo0737	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_116	"Translation; Function unknown;"	ATG	 
lmo0738	767766	769619	1854	+	767766	769619	1854	ORF	similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIABC component	hypothetical protein - RAST_Product: PTS system, D-allose-specific IIB component (EC 2.7.1.69) / PTS system, D-allose-specific IIC component (EC 2.7.1.69) / PTS system, D-allose-specific IIA component (EC 2.7.1.69)	PTS system, D-allose-specific IIB component (EC 2.7.1.69) / PTS system, D-allose-specific IIC component (EC 2.7.1.69) / PTS system, D-allose-specific IIA component (EC 2.7.1.69)	Operon_116	Carbohydrate transport and metabolism	ATG	 
lmo0739	769639	771012	1374	+	769639	771012	1374	ORF	similar to 6-phospho-beta-glucosidase	hypothetical protein - RAST_Product: 6-phospho-beta-glucosidase (EC 3.2.1.86)	6-phospho-beta-glucosidase (EC 3.2.1.86)	Operon_116	Carbohydrate transport and metabolism	ATG	 
lmo0740	771026	771685	660	-	771026	771685	660	ORF	similar to putative transcription regulator	hypothetical protein - RAST_Product: FIG00774949: hypothetical protein	FIG00774949: hypothetical protein		Signal transduction mechanisms	ATG	 
lmo0741	771949	772326	378	+	771949	772326	378	ORF	similar to transcriptional regulator (GntR family)	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Operon_117	Transcription	ATG	 
lmo0742	772310	772999	690	+	772310	772999	690	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_117	Defense/virulence mechanisms	ATG	 
lmo0743	772996	773700	705	+	772996	773700	705	ORF	lmo0743	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_117	Not in COGs	ATG	 
lmo0744	773715	775715	2001	+	773715	775715	2001	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Multidrug resistance ABC transporter ATP-binding and permease protein	Multidrug resistance ABC transporter ATP-binding and permease protein	Operon_117	Defense/virulence mechanisms	ATG	 
lmo0745	775744	776247	504	+	775744	776247	504	ORF	lmo0745	hypothetical protein - RAST_Product: FIG00774203: hypothetical protein	FIG00774203: hypothetical protein	Operon_117	Not in COGs	ATG	 
lmo0746	776398	776697	300	-	776398	776697	300	ORF		hypothetical protein - RAST_Product: FIG00774480: hypothetical protein	FIG00774480: hypothetical protein		Not in COGs	ATG	 
lmo0747	776761	777102	342	+	776761	777102	342	ORF	lmo0747	hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0748	777209	777496	288	+	777209	777496	288	ORF	lmo0748	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_118	Not in COGs	ATG	 
lmo0749	777493	777699	207	+	777493	777699	207	ORF	lmo0749	hypothetical protein - RAST_Product: Transcriptional regulator, Cro/CI family	Transcriptional regulator, Cro/CI family	Operon_118	Transcription	ATG	 
lmo0750	777692	778207	516	+	777692	778207	516	ORF	lmo0750	hypothetical protein - RAST_Product: FIG00774837: hypothetical protein	FIG00774837: hypothetical protein	Operon_118	Not in COGs	ATG	 
lmo0751	778262	778558	297	+	778262	778558	297	ORF	lmo0751	hypothetical protein - RAST_Product: FIG00775008: hypothetical protein	FIG00775008: hypothetical protein	Operon_118	Not in COGs	TTG	 
lmo0752	778654	779490	837	+	778654	779490	837	ORF	weakly similar to a putative haloacetate dehalogenase	hypothetical protein - RAST_Product: Predicted hydrolase/acyltransferase	Predicted hydrolase/acyltransferase		General function prediction only	ATG	 
lmo0753	779616	780296	681	+	779616	780296	681	ORF	similar to transcription regulator Crp/Fnr family	hypothetical protein - RAST_Product: transcriptional regulator, Crp family	transcriptional regulator, Crp family		Signal transduction mechanisms	ATG	 
lmo0754	780377	780988	612	+	780377	780988	612	ORF	weakly similar to a bile acid 7-alpha dehydratase	hypothetical protein - RAST_Product: FIG00774381: hypothetical protein	FIG00774381: hypothetical protein		Defense/virulence mechanisms	ATG	 
lmo0755	781103	781924	822	+	781103	781924	822	ORF		hypothetical protein - RAST_Product: FIG006988: Lipase/Acylhydrolase with GDSL-like motif	FIG006988: Lipase/Acylhydrolase with GDSL-like motif	Operon_119	Amino acid transport and metabolism	GTG	 
lmo0756	781896	782801	906	+	781896	782801	906	ORF	Similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_119	Defense/virulence mechanisms	ATG	 
lmo0757	782794	783774	981	+	782794	783774	981	ORF		hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_119	General function prediction only	TTG	 
lmo0758	783901	784788	888	+	783901	784788	888	ORF	lmo0758	hypothetical protein - RAST_Product: Glyoxalase in BtlB locus	Glyoxalase in BtlB locus	Operon_120	Amino acid transport and metabolism	ATG	 
lmo0759	784788	785747	960	+	784788	785747	960	ORF	lmo0759	hypothetical protein - RAST_Product: glyoxalase family protein	glyoxalase family protein	Operon_120	Amino acid transport and metabolism	ATG	 
lmo0760	785754	786362	609	+	785754	786362	609	ORF	lmo0760	hypothetical protein - RAST_Product: Carboxylesterase (EC 3.1.1.1)	Carboxylesterase (EC 3.1.1.1)	Operon_120	General function prediction only	ATG	 
lmo0761	786372	786992	621	+	786372	786992	621	ORF		hypothetical protein - RAST_Product: Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)	Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)	Operon_120	General function prediction only	ATG	 
lmo0762	787320	788576	1257	+	787320	788576	1257	ORF	similar to ATP/GTP-binding protein	hypothetical protein - RAST_Product: GTP-binding protein related to HflX	GTP-binding protein related to HflX	Operon_121	General function prediction only	ATG	 
lmo0763	788642	789514	873	+	788642	789514	873	ORF		hypothetical protein - RAST_Product: Ser/Thr protein phosphatase family protein	Ser/Thr protein phosphatase family protein	Operon_121	General function prediction only	ATG	 
lmo0764	789520	790509	990	+	789520	790509	990	ORF	similar to lipoate-protein ligase	hypothetical protein - RAST_Product: Lipoate-protein ligase A	Lipoate-protein ligase A	Operon_121	Coenzyme transport and metabolism	GTG	 
lmo0765	790662	791960	1299	+	790662	791960	1299	ORF	lmo0765	hypothetical protein - RAST_Product: FIG00774513: hypothetical protein	FIG00774513: hypothetical protein		Function unknown	TTG	 
lmo0766	791977	792867	891	+	791977	792867	891	ORF	similar to putative sugar ABC transporter, permease protein	hypothetical protein - RAST_Product: sugar ABC transporter permease, putative	sugar ABC transporter permease, putative		Carbohydrate transport and metabolism	ATG	 
lmo0767	792879	793754	876	+	792879	793754	876	ORF	similar to ABC transporter, permease protein	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein		Carbohydrate transport and metabolism	ATG	 
lmo0768	793777	795030	1254	+	793777	795030	1254	ORF	similar to sugar ABC transporter, periplasmic sugar-binding protein	hypothetical protein - RAST_Product: Sugar ABC transporter, sugar-binding protein	Sugar ABC transporter, sugar-binding protein		Carbohydrate transport and metabolism	ATG	 
lmo0769	795034	796062	1029	+	795034	796062	1029	ORF	similar to alpha-1,6-mannanase	hypothetical protein - RAST_Product: putative alpha-1,6-mannanase	putative alpha-1,6-mannanase		Carbohydrate transport and metabolism	ATG	 
lmo0770	796075	797193	1119	-	796075	797193	1119	ORF	similar to transcriptional regulator (LacI family)	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family		Transcription	ATG	 
lmo0771	797353	798105	753	+	797353	798105	753	ORF	lmo0771	hypothetical protein - RAST_Product: FIG00774365: hypothetical protein	FIG00774365: hypothetical protein	Operon_122	Not in COGs	ATG	 
lmo0772	798141	798788	648	+	798141	798788	648	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Operon_122	Transcription	ATG	 
lmo0773	798828	799817	990	-	798828	799817	990	ORF	similar to alcohol dehydrogenase	hypothetical protein - RAST_Product: Alcohol dehydrogenase (EC 1.1.1.1)	Alcohol dehydrogenase (EC 1.1.1.1)		"Energy production and conversion; General function prediction only;"	ATG	 
lmo0774	799996	800925	930	+	799996	800925	930	ORF		hypothetical protein - RAST_Product: Transcription regulator [contains diacylglycerol kinase catalytic domain]	Transcription regulator [contains diacylglycerol kinase catalytic domain]		"Lipid transport and metabolism; General function prediction only;"	ATG	 
lmo0775	800965	801297	333	+	800965	801297	333	ORF	lmo0775	hypothetical protein - RAST_Product: FIG00774607: hypothetical protein	FIG00774607: hypothetical protein		Not in COGs	ATG	 
lmo0776	801336	802202	867	-	801336	802202	867	ORF	similar to transcription regulator (repressor)	hypothetical protein - RAST_Product: Fructokinase (EC 2.7.1.4)	Fructokinase (EC 2.7.1.4)		"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0777	802356	802739	384	+	802356	802739	384	ORF	lmo0777	hypothetical protein - RAST_Product: FIG00774370: hypothetical protein	FIG00774370: hypothetical protein		Not in COGs	GTG	 
lmo0778	803201	803548	348	+	803201	803548	348	ORF	lmo0778	hypothetical protein	FIG00774426: hypothetical protein		Not in COGs	ATG	 
lmo0779	803745	804212	468	-	803745	804212	468	ORF	lmo0779	hypothetical protein - RAST_Product: FIG00774734: hypothetical protein	FIG00774734: hypothetical protein		Function unknown	ATG	 
lmo0780	804382	804729	348	+	804382	804729	348	ORF	lmo0780	hypothetical protein - RAST_Product: FIG00775457: hypothetical protein	FIG00775457: hypothetical protein		Not in COGs	ATG	 
lmo0781	804887	805765	879	-	804887	805765	879	ORF	"similar to mannose-specific phosphotransferase system (PTS) component IID; hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel"	PTS system mannose-specific transporter subunit IID	PTS system, mannose-specific IID component (EC 2.7.1.69)	Operon_123	Carbohydrate transport and metabolism	ATG	 
lmo0782	805784	806596	813	-	805784	806596	813	ORF	similar to mannose-specific phosphotransferase system (PTS) component IIC	hypothetical protein - RAST_Product: PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)	PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)	Operon_123	Carbohydrate transport and metabolism	ATG	 
lmo0783	806770	807255	486	-	806770	807255	486	ORF	similar to mannose-specific phosphotransferase system (PTS) component IIB	hypothetical protein - RAST_Product: PTS system, mannose-specific IIB component (EC 2.7.1.69)	PTS system, mannose-specific IIB component (EC 2.7.1.69)	Operon_124	Carbohydrate transport and metabolism	ATG	 
lmo0784	807255	807689	435	-	807255	807689	435	ORF	similar to mannose-specific phosphotransferase system (PTS) component IIA	hypothetical protein - RAST_Product: PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69)	PTS system, mannose-specific IIB component (EC 2.7.1.69) / PTS system, mannose-specific IIA component (EC 2.7.1.69)	Operon_124	Carbohydrate transport and metabolism	ATG	 
lmo0785	807976	810792	2817	-	807976	810792	2817	ORF	similar to transcriptional regulator (NifA/NtrC family)	hypothetical protein - RAST_Product: NtrC family Transcriptional regulator, ATPase domain	NtrC family Transcriptional regulator, ATPase domain		"Transcription; Signal transduction mechanisms;"	ATG	 
lmo0786	810985	811620	636	+	810985	811620	636	ORF	similar to acyl-carrier protein phosphodiesterase and to NAD(P)H dehydrogenase	hypothetical protein - RAST_Product: acyl-carrier protein phosphodiesterase, putative	acyl-carrier protein phosphodiesterase, putative		Lipid transport and metabolism	ATG	 
lmo0787	811813	813189	1377	+	811813	813189	1377	ORF	similar to amino acid transporter	hypothetical protein - RAST_Product: D-serine/D-alanine/glycine transporter	D-serine/D-alanine/glycine transporter		Amino acid transport and metabolism	ATG	 
lmo0788	813451	817878	4428	+	813451	817878	4428	ORF	lmo0788	hypothetical protein - RAST_Product: Activator of (R)-2-hydroxyglutaryl-CoA dehydratase	Activator of (R)-2-hydroxyglutaryl-CoA dehydratase		"Lipid transport and metabolism; Function unknown;"	ATG	 
lmo0789	817914	818762	849	-	817914	818762	849	ORF		hypothetical protein - RAST_Product: Phenazine biosynthesis protein PhzF like	Phenazine biosynthesis protein PhzF like	Operon_125	General function prediction only	ATG	 
lmo0790	818789	819265	477	-	818789	819265	477	ORF	similar to transcription regulator (EbsC from Enterococcus faecalis)	hypothetical protein - RAST_Product: YbaK family protein	YbaK family protein	Operon_125	Function unknown	TTG	 
lmo0791	819389	820039	651	+	819389	820039	651	ORF	lmo0791	hypothetical protein - RAST_Product: FIG00774249: hypothetical protein	FIG00774249: hypothetical protein		General function prediction only	ATG	 
lmo0792	820145	821035	891	+	820145	821035	891	ORF	similar to conserved hypothetical protein	hypothetical protein - RAST_Product: hydrolase, carbon-nitrogen family	hydrolase, carbon-nitrogen family		General function prediction only	ATG	 
lmo0793	821070	821771	702	-	821070	821771	702	ORF	similar to conserved hypothetical protein	hypothetical protein - RAST_Product: putative transport protein	putative transport protein		General function prediction only	ATG	 
lmo0794	821886	822527	642	-	821886	822527	642	ORF	similar to B. subtilis YwnB protein	hypothetical protein - RAST_Product: Rrf2-linked NADH-flavin reductase	Rrf2-linked NADH-flavin reductase		General function prediction only	ATG	 
lmo0795	822611	823531	921	-	822611	823531	921	ORF		hypothetical protein - RAST_Product: RarD protein	RarD protein		General function prediction only	ATG	 
lmo0796	823638	824168	531	-	823638	824168	531	ORF		hypothetical protein - RAST_Product: FIG01109311: hypothetical protein	FIG01109311: hypothetical protein		Function unknown	ATG	 
lmo0797	824423	824884	462	+	824423	824884	462	ORF	lmo0797	hypothetical protein	transcriptional regulator, MarR family		Transcription	ATG	 
lmo0798	824936	826396	1461	-	824936	826396	1461	ORF	similar to lysine-specific permease	hypothetical protein - RAST_Product: Lysine-specific permease	Lysine-specific permease		Amino acid transport and metabolism	GTG	 
lmo0799	826752	827513	762	-	826752	827513	762	ORF	lmo0799	hypothetical protein - RAST_Product: Blue-light photoreceptor	Blue-light photoreceptor		Signal transduction mechanisms	ATG	 
lmo0800	827666	828016	351	+	827666	828016	351	ORF	similar to B. subtilis YqkB protein	hypothetical protein - RAST_Product: FIG00774434: hypothetical protein	FIG00774434: hypothetical protein		Function unknown	ATG	 
lmo0801	828168	830108	1941	+	828168	830108	1941	ORF	similar to internalin, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo0801 homolog	Internalin-like protein (LPXTG motif) Lmo0801 homolog		Function unknown	ATG	 
lmo0802	830259	830897	639	+	830259	830897	639	ORF	weakly similar to GTP-pyrophosphokinase	hypothetical protein - RAST_Product: GTP pyrophosphokinase (EC 2.7.6.5)	GTP pyrophosphokinase (EC 2.7.6.5)		Function unknown	ATG	 
lmo0803	831025	833073	2049	+	831025	833073	2049	ORF	similar to putative Na+/H+ antiporter	hypothetical protein - RAST_Product: Na+/H+ antiporter	Na+/H+ antiporter		Inorganic ion transport and metabolism	TTG	 
lmo0804	833117	833587	471	-	833117	833587	471	ORF	lmo0804	hypothetical protein - RAST_Product: FIG00774197: hypothetical protein	FIG00774197: hypothetical protein	Operon_126	Not in COGs	ATG	 
lmo0805	833615	834076	462	-	833615	834076	462	ORF	lmo0805	hypothetical protein - RAST_Product: FIG00774294: hypothetical protein	FIG00774294: hypothetical protein	Operon_126	Not in COGs	ATG	 
lmo0806	834287	834829	543	+	834287	834829	543	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, MerR family, near polyamine transporter	Transcriptional regulator, MerR family, near polyamine transporter	Operon_127	Transcription	ATG	 
lmo0807	834845	835939	1095	+	834845	835939	1095	ORF	similar to spermidine/putrescine ABC transporter, ATP-binding protein	hypothetical protein	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	Operon_127	Amino acid transport and metabolism	GTG	 
lmo0808	835939	836748	810	+	835939	836748	810	ORF	similar to spermidine/putrescine ABC transporter, permease protein	hypothetical protein - RAST_Product: Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)	Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)	Operon_127	Amino acid transport and metabolism	ATG	 
lmo0809	836745	837551	807	+	836745	837551	807	ORF	similar to spermidine/putrescine ABC transporter, permease protein	hypothetical protein - RAST_Product: Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)	Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)	Operon_127	Amino acid transport and metabolism	ATG	 
lmo0810	837548	838621	1074	+	837548	838621	1074	ORF	similar to spermidine/putrescine-binding protein	hypothetical protein - RAST_Product: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	Operon_127	Amino acid transport and metabolism	ATG	 
lmo0811	838751	839452	702	+	838751	839452	702	ORF	similar to carbonic anhydrase	hypothetical protein - RAST_Product: Carbonic anhydrase precursor (EC 4.2.1.1)	Carbonic anhydrase precursor (EC 4.2.1.1)		Inorganic ion transport and metabolism	ATG	 
lmo0812	839520	840062	543	+	839520	840062	543	ORF	lmo0812	hypothetical protein - RAST_Product: GTP pyrophosphokinase (EC 2.7.6.5)	GTP pyrophosphokinase (EC 2.7.6.5)		"Transcription; Signal transduction mechanisms;"	ATG	 
lmo0813	840200	841072	873	+	840200	841072	873	ORF	similar to fructokinases	hypothetical protein - RAST_Product: Fructokinase (EC 2.7.1.4)	Fructokinase (EC 2.7.1.4)		"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo0814	841157	842086	930	+	841157	842086	930	ORF	similar to oxidoreductases	hypothetical protein - RAST_Product: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)		General function prediction only	ATG	 
lmo0815	842313	842765	453	+	842313	842765	453	ORF	similar to transcription regulators	hypothetical protein - RAST_Product: Transcriptional regulator, MarR family	Transcriptional regulator, MarR family		Transcription	ATG	 
lmo0816	842781	843287	507	+	842781	843287	507	ORF	similar to B. subtilis regulatory protein PaiA	hypothetical protein - RAST_Product: protease synthase and sporulation negative regulatory protein pai 1	protease synthase and sporulation negative regulatory protein pai 1		"Transcription; General function prediction only;"	ATG	 
lmo0817	843311	843724	414	-	843311	843724	414	ORF	similar to E. coli PhnB protein	"hypothetical protein - RAST_Product: PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"	"PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"		Function unknown	ATG	 
lmo0818	843949	846579	2631	+	843949	846579	2631	ORF	similar to cation transporting ATPase	hypothetical protein - RAST_Product: cation-transporting ATPase	cation-transporting ATPase	Operon_128	Inorganic ion transport and metabolism	ATG	 
lmo0819	846594	847442	849	+	846594	847442	849	ORF	lmo0819	hypothetical protein - RAST_Product: FIG00774371: hypothetical protein	FIG00774371: hypothetical protein	Operon_128	Not in COGs	ATG	 
lmo0820	847552	848109	558	+	847552	848109	558	ORF	some similarity to acatyltransferases	hypothetical protein - RAST_Product: Acetyltransferase (GNAT family) SAS0976	Acetyltransferase (GNAT family) SAS0976	Operon_128	"Transcription; General function prediction only;"	TTG	 
lmo0821	848126	848788	663	+	848126	848788	663	ORF	lmo0821	hypothetical protein - RAST_Product: FIG00774116: hypothetical protein	FIG00774116: hypothetical protein	Operon_128	Not in COGs	ATG	 
lmo0822	848804	849193	390	-	848804	849193	390	ORF	similar to transcriptional regulators	hypothetical protein - RAST_Product: transcriptional regulator, MerR family	transcriptional regulator, MerR family		Transcription	GTG	 
lmo0823	849314	850138	825	+	849314	850138	825	ORF	similar to oxydoreductases	hypothetical protein - RAST_Product: oxidoreductase of aldo/keto reductase family, subgroup 1	oxidoreductase of aldo/keto reductase family, subgroup 1		General function prediction only	TTG	 
lmo0824	850216	851184	969	+	850216	851184	969	ORF	lmo0824	hypothetical protein - RAST_Product: FIG00774284: hypothetical protein	FIG00774284: hypothetical protein		Not in COGs	ATG	 
lmo0825	851225	852505	1281	+	851225	852505	1281	ORF	similar to 3-hydroxy-3-methylglutaryl-coenzyme a reductase	hypothetical protein - RAST_Product: Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)	Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)		Lipid transport and metabolism	ATG	 
lmo0826	852704	854338	1635	+	852704	854338	1635	ORF	similar to transport protein	hypothetical protein - RAST_Product: Na/Pi-cotransporter family protein	Na/Pi-cotransporter family protein		Inorganic ion transport and metabolism	ATG	 
lmo0827	854443	854748	306	+	854443	854748	306	ORF	similar to transposases	hypothetical protein - RAST_Product: ISLmo1, transposase OrfA	ISLmo1, transposase OrfA		Not in COGs	ATG	 
lmo0828	854745	855581	837	+	854745	855581	837	ORF	similar to transposases	hypothetical protein - RAST_Product: ISLmo1, transposase OrfB, C-terminus	ISLmo1, transposase OrfB, C-terminus		Not in COGs	GTG	 
lmo0829	855759	859406	3648	+	855759	859406	3648	ORF	highly similar to pyruvate-flavodoxin oxidoreductase	hypothetical protein - RAST_Product: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)		Energy production and conversion	ATG	 
lmo0830	859656	861617	1962	-	859656	861617	1962	ORF	highly similar to fructose-1,6-bisphosphatase	hypothetical protein - RAST_Product: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)		Carbohydrate transport and metabolism	GTG	 
lmo0831	861731	862642	912	-	861731	862642	912	ORF	lmo0831	hypothetical protein - RAST_Product: FIG00774061: hypothetical protein	FIG00774061: hypothetical protein		General function prediction only	ATG	 
lmo0832	863322	863606	285	+	863322	863606	285	ORF	similar to transposase	hypothetical protein - RAST_Product: transposase OrfA, IS3 family	transposase OrfA, IS3 family		Replication, recombination and repair	ATG	 
lmo0833	863798	864688	891	+	863798	864688	891	ORF	similar to transcriptional regulator	hypothetical protein - RAST_Product: transcriptional activator	transcriptional activator		Transcription	ATG	 
lmo0834	864824	865537	714	+	864824	865537	714	ORF	lmo0834	hypothetical protein	FIG00774832: hypothetical protein	Operon_129	Not in COGs	ATA	 
lmo0835	865530	866534	1005	+	865530	866534	1005	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo0835 homolog	Operon_129	Not in COGs	GTG	 
lmo0836	866577	866990	414	-	866577	866990	414	ORF	similar to B. subtilis YrkR protein	phosphate-starvation-inducible protein PsiE	PsiE protein		Function unknown	ATG	 
lmo0837	867067	868800	1734	+	867067	868800	1734	ORF		Pseudo-gene or RefSeq provisional	ABC transporter, ATP-binding protein		Not in COGs	GGG	 
lmo0838	869095	870480	1386	+	869095	870480	1386	ORF	"highly similar to hexose phosphate transport protein; cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate"	sugar phosphate antiporter	Hexose phosphate transport protein UhpT		Carbohydrate transport and metabolism	ATG	 
lmo0839	870587	871807	1221	-	870587	871807	1221	ORF	similar to Tetracycline resistance protein	"hypothetical protein - RAST_Product: Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1); Efflux pump Lde"	"Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1); Efflux pump Lde"		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo0840	871940	872410	471	-	871940	872410	471	ORF	lmo0840	hypothetical protein - RAST_Product: Transcriptional regulator, MarR family	Transcriptional regulator, MarR family		Transcription	ATG	 
lmo0841	872616	875258	2643	+	872616	875258	2643	ORF	similar to cation (calcium) transporting ATPase	hypothetical protein - RAST_Product: cation-transporting ATPase	cation-transporting ATPase		Inorganic ion transport and metabolism	TTG	 
lmo0842	875721	881855	6135	+	875721	881855	6135	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo0842 homolog		Not in COGs	ATG	 
lmo0843	881992	882249	258	-	881992	882249	258	ORF	similar to B. subtilis protein YsdA	hypothetical protein - RAST_Product: cytochrome c oxidase, subunit IV	cytochrome c oxidase, subunit IV		Function unknown	ATG	 
lmo0844	882328	882705	378	+	882328	882705	378	ORF		hypothetical protein - RAST_Product: Endoribonuclease L-PSP	Endoribonuclease L-PSP		Translation	ATG	 
lmo0845	882962	884065	1104	+	882962	884065	1104	ORF	similar to B. subtilis YxjH and YxjG proteins	hypothetical protein - RAST_Product: Methionine synthase II (cobalamin-independent)	Methionine synthase II (cobalamin-independent)		Amino acid transport and metabolism	ATG	 
lmo0846	884170	885270	1101	+	884170	885270	1101	ORF	similar to excinuclease ABC, chain C (UvrC)	hypothetical protein - RAST_Product: Excinuclease ABC subunit C	Excinuclease ABC subunit C		Replication, recombination and repair	TTG	 
lmo0847	885440	886882	1443	+	885440	886882	1443	ORF	similar to Glutamine ABC transporter (binding and transport protein)	hypothetical protein - RAST_Product: / Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	/ Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Operon_130	"Amino acid transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0848	886875	887603	729	+	886875	887603	729	ORF	similar to amino acid ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Glutamate transport ATP-binding protein	Glutamate transport ATP-binding protein	Operon_130	Amino acid transport and metabolism	ATG	 
lmo0849	887652	889502	1851	-	887652	889502	1851	ORF	"similar to amidases; catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia"	amidase	amidase family protein		Translation	ATG	 
lmo0850	890069	890215	147	+	890069	890215	147	ORF		hypothetical protein - RAST_Product: FIG00774105: hypothetical protein	FIG00774105: hypothetical protein		Not in COGs	TTG	 
lmo0851	890439	891197	759	+	890439	891197	759	ORF	lmo0851	hypothetical protein - RAST_Product: FIG00774037: hypothetical protein	FIG00774037: hypothetical protein		Not in COGs	ATG	 
lmo0852	891277	891831	555	+	891277	891831	555	ORF	similar to transcription regulator TetR/AcrR family	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Operon_131	Transcription	ATG	 
lmo0853	891848	892189	342	+	891848	892189	342	ORF	similar to E. coli SugE protein (transmembrane chaperone)	hypothetical protein - RAST_Product: Quaternary ammonium compound-resistance protein sugE	Quaternary ammonium compound-resistance protein sugE	Operon_131	Inorganic ion transport and metabolism	TTG	 
lmo0854	892192	892512	321	+	892192	892512	321	ORF	similar to E. coli SugE protein (transmembrane chaperone)	hypothetical protein - RAST_Product: Quaternary ammonium compound-resistance protein SugE	Quaternary ammonium compound-resistance protein SugE	Operon_131	Inorganic ion transport and metabolism	ATG	 
lmo0855	892662	893774	1113	+	892662	893774	1113	ORF	"D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli"	D-alanyl-alanine synthetase A	D-alanine--D-alanine ligase A (EC 6.3.2.4)	Operon_132	Cell wall/membrane biogenesis	ATG	 
lmo0856	893838	895211	1374	+	893838	895211	1374	ORF		UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate-D-alanyl-D-alanyl ligase	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	Operon_132	Cell wall/membrane biogenesis	TTG	 
lmo0857	895278	895991	714	+	895278	895991	714	ORF	similar to carboxylesterase	hypothetical protein - RAST_Product: hydrolase, alpha/beta fold family	hydrolase, alpha/beta fold family	Operon_132	General function prediction only	ATG	 
lmo0858	896003	897028	1026	-	896003	897028	1026	ORF	similar to transcription regulator lacI family	hypothetical protein - RAST_Product: DNA-binding transcriptional regulator	DNA-binding transcriptional regulator		Transcription	ATG	 
lmo0859	897273	898592	1320	+	897273	898592	1320	ORF	similar to putative sugar ABC transporter, periplasmic sugar-binding protein	hypothetical protein - RAST_Product: Multiple sugar ABC transporter, substrate-binding protein	Multiple sugar ABC transporter, substrate-binding protein		Carbohydrate transport and metabolism	ATG	 
lmo0860	898589	899467	879	+	898589	899467	879	ORF	similar to sugar ABC transporter, permease protein	hypothetical protein	Multiple sugar ABC transporter, membrane-spanning permease protein MsmF		Carbohydrate transport and metabolism	ATG	 
lmo0861	899454	900287	834	+	899454	900287	834	ORF	similar to sugar ABC transporter, permease protein -	hypothetical protein	Sugar ABC transporter, permease protein precursor		Carbohydrate transport and metabolism	ATG	 
lmo0862	900303	901835	1533	+	900303	901835	1533	ORF	similar to oligo-1,6-glucosidase	hypothetical protein - RAST_Product: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)	Trehalose-6-phosphate hydrolase (EC 3.2.1.93)		Carbohydrate transport and metabolism	TTG	 
lmo0863	901837	902751	915	+	901837	902751	915	ORF	lmo0863	hypothetical protein - RAST_Product: FIG00774057: hypothetical protein	FIG00774057: hypothetical protein		Not in COGs	ATG	 
lmo0864	902773	903840	1068	+	902773	903840	1068	ORF	lmo0864	hypothetical protein - RAST_Product: COG2152 predicted glycoside hydrolase	COG2152 predicted glycoside hydrolase		Carbohydrate transport and metabolism	ATG	 
lmo0865	903837	905510	1674	+	903837	905510	1674	ORF	similar to phosphomannomutase	hypothetical protein - RAST_Product: phosphoglucomutase/phosphomannomutase family protein	phosphoglucomutase/phosphomannomutase family protein		Carbohydrate transport and metabolism	ATG	 
lmo0866	905962	907524	1563	+	905962	907524	1563	ORF	similar to ATP-dependent RNA helicase	hypothetical protein - RAST_Product: Cold-shock DEAD-box protein A	Cold-shock DEAD-box protein A		"Replication, recombination and repair; Transcription; Translation;"	TTG	 
lmo0867	907979	908467	489	+	907979	908467	489	ORF	lmo0867	hypothetical protein - RAST_Product: Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter	Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter		Function unknown	ATG	 
lmo0868	908499	909056	558	-	908499	909056	558	ORF	lmo0868	hypothetical protein - RAST_Product: FIG00774733: hypothetical protein	FIG00774733: hypothetical protein		Transcription	ATG	 
lmo0869	909159	910157	999	+	909159	910157	999	ORF	lmo0869	hypothetical protein - RAST_Product: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45)	2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45)	Operon_133	General function prediction only	ATG	 
lmo0870	910173	910484	312	+	910173	910484	312	ORF	lmo0870	hypothetical protein - RAST_Product: FIG00774332: hypothetical protein	FIG00774332: hypothetical protein	Operon_133	Function unknown	ATG	 
lmo0871	910517	910870	354	-	910517	910870	354	ORF	similar to B. subtilis YtcD protein	hypothetical protein - RAST_Product: Transcriptional regulator, HxlR family	Transcriptional regulator, HxlR family		Transcription	ATG	 
lmo0872	910998	912164	1167	+	910998	912164	1167	ORF	similar to antibiotic resistance protein	hypothetical protein - RAST_Product: major facilitator family transporter	major facilitator family transporter		Carbohydrate transport and metabolism	GTG	 
lmo0873	912372	914390	2019	+	912372	914390	2019	ORF	Similar to transcriptional regulator (antiterminator)	hypothetical protein - RAST_Product: Transcriptional antiterminator, PTS system IIA 2 domain protein	Transcriptional antiterminator, PTS system IIA 2 domain protein		"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0874	914405	914734	330	+	914405	914734	330	ORF	similar to PTS system enzyme IIA component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	PTS system, cellobiose-specific IIA component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo0875	914735	915070	336	+	914735	915070	336	ORF	similar to PTS system, beta-glucoside enzyme IIB component	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Carbohydrate transport and metabolism	ATG	 
lmo0876	915090	916415	1326	+	915090	916415	1326	ORF	similar to PTS system, Lichenan-specific enzyme IIC component	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Carbohydrate transport and metabolism	ATG	 
lmo0877	916436	917164	729	+	916436	917164	729	ORF	similar to B. subtilis NagB protein (glucosamine-6-phosphate isomerase)	hypothetical protein - RAST_Product: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)		Carbohydrate transport and metabolism	ATG	 
lmo0878	917164	918117	954	+	917164	918117	954	ORF	similar to oxidoreductases	hypothetical protein - RAST_Product: oxidoreductase, aldo/keto reductase family	oxidoreductase, aldo/keto reductase family		Energy production and conversion	ATG	 
lmo0879	918135	918902	768	+	918135	918902	768	ORF	lmo0879	hypothetical protein - RAST_Product: Sugar phosphate isomerases/epimerases	Sugar phosphate isomerases/epimerases		Carbohydrate transport and metabolism	ATG	 
lmo0880	919020	920408	1389	+	919020	920408	1389	ORF	similar to wall associated protein precursor (LPXTG motif)	hypothetical protein - RAST_Product: Putative peptidoglycan bound protein (LPXTG motif) Lmo0880 homolog	Putative peptidoglycan bound protein (LPXTG motif) Lmo0880 homolog		Cell wall/membrane biogenesis	ATG	 
lmo0881	920452	920928	477	-	920452	920928	477	ORF	lmo0881	hypothetical protein - RAST_Product: Lmo0881 homolog, only in Listeria	Lmo0881 homolog, only in Listeria		Not in COGs	ATG	 
lmo0882	921062	921544	483	+	921062	921544	483	ORF	similar to B. subtilis YdbS protein	hypothetical protein - RAST_Product: Hypothetical protein, ydbS homolog	Hypothetical protein, ydbS homolog	Operon_134	Function unknown	ATG	 
lmo0883	921537	923012	1476	+	921537	923012	1476	ORF	similar to B. subtilis YbtB protein	hypothetical protein - RAST_Product: Hypothetical protein, ydbT homolog	Hypothetical protein, ydbT homolog	Operon_134	Function unknown	ATG	 
lmo0884	923161	924540	1380	+	923161	924540	1380	ORF	"similar to protoporphyrinogen IX and coproporphyrinogen III oxidase (HemY); catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX"	protoporphyrinogen oxidase	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	Operon_135	Coenzyme transport and metabolism	GTG	 
lmo0885	924542	924898	357	+	924542	924898	357	ORF	"similar to holo-acyl-carrier protein synthase; Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids"	4'-phosphopantetheinyl transferase	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	Operon_135	Lipid transport and metabolism	ATG	 
lmo0886	924917	926023	1107	+	924917	926023	1107	ORF	similar to alanine racemase	hypothetical protein - RAST_Product: Alanine racemase (EC 5.1.1.1)	Alanine racemase (EC 5.1.1.1)	Operon_135	Cell wall/membrane biogenesis	ATG	 
lmo0887	926229	926507	279	+	926229	926507	279	ORF	similar to B. subtilis YdcD protein	hypothetical protein - RAST_Product: Programmed cell death antitoxin YdcD	Programmed cell death antitoxin YdcD	Operon_136	Transcription	GTG	 
lmo0888	926511	926858	348	+	926511	926858	348	ORF	similar to B. subtilis YdcE protein	hypothetical protein	Programmed cell death toxin YdcE	Operon_136	Signal transduction mechanisms	CTG	 
lmo0889	927110	927946	837	+	927110	927946	837	ORF	highly similar to positive regulator of sigma-B activity	hypothetical protein - RAST_Product: RsbR, positive regulator of sigma-B	RsbR, positive regulator of sigma-B	Operon_136	Signal transduction mechanisms	ATG	 
lmo0890	927952	928308	357	+	927952	928308	357	ORF	highly similar to negative regulation of sigma-B activity	hypothetical protein - RAST_Product: RsbS, negative regulator of sigma-B	RsbS, negative regulator of sigma-B	Operon_136	Signal transduction mechanisms	GTG	 
lmo0891	928311	928721	411	+	928311	928721	411	ORF	highly similar to positive regulation of sigma-B activity	hypothetical protein - RAST_Product: Anti-sigma B factor RsbT	Anti-sigma B factor RsbT	Operon_136	Signal transduction mechanisms	ATG	 
lmo0892	928738	929742	1005	+	928738	929742	1005	ORF	highly similar to serine phosphatase RsbU	hypothetical protein - RAST_Product: Serine phosphatase RsbU, regulator of sigma subunit	Serine phosphatase RsbU, regulator of sigma subunit	Operon_136	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo0893	929892	930236	345	+	929892	930236	345	ORF		anti-anti-sigma factor (antagonist of RsbW)	"Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV"	Operon_136	Signal transduction mechanisms	ATG	 
lmo0894	930220	930693	474	+	930220	930693	474	ORF	binds to sigma-B preventing the formation of an RNA polymerase holoenzyme	serine-protein kinase RsbW	Serine-protein kinase RsbW (EC 2.7.11.1)	Operon_136	Signal transduction mechanisms	ATG	 
lmo0895	930671	931450	780	+	930671	931450	780	ORF	"sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase"	RNA polymerase sigma factor SigB	RNA polymerase sigma factor SigB	Operon_136	Transcription	ATG	 
lmo0896	931451	932050	600	+	931451	932050	600	ORF		indirect negative regulation of sigma B dependant gene expression (serine phosphatase)	hypothetical protein	Operon_136	Not in COGs	ATG	 
lmo0897	932257	933882	1626	+	932257	933882	1626	ORF	similar to transport proteins	hypothetical protein	Sulfate permease		Inorganic ion transport and metabolism	TTG	 
lmo0898	933959	936136	2178	+	933959	936136	2178	ORF		hypothetical protein - RAST_Product: Transcription accessory protein (S1 RNA-binding domain)	Transcription accessory protein (S1 RNA-binding domain)	Operon_137	Transcription	ATG	 
lmo0899	936136	936603	468	+	936136	936603	468	ORF	similar to B. subtilis YdcK protein	hypothetical protein - RAST_Product: Putative metallopeptidase (Zinc) SprT family	Putative metallopeptidase (Zinc) SprT family	Operon_137	Function unknown	ATG	 
lmo0900	937202	937594	393	+	937202	937594	393	ORF	lmo0900	hypothetical protein - RAST_Product: FIG00774451: hypothetical protein	FIG00774451: hypothetical protein		Function unknown	ATG	 
lmo0901	937739	939025	1287	+	937739	939025	1287	ORF	similar to PTS system, cellobiose-specific IIC component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	GTG	 
lmo0902	939106	939819	714	+	939106	939819	714	ORF	similar to transcription regulator (GntR family)	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family		Transcription	TTG	 
lmo0903	940316	940696	381	+	940316	940696	381	ORF		hypothetical protein - RAST_Product: OsmC/Ohr family protein	OsmC/Ohr family protein		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0904	940810	941484	675	+	940810	941484	675	ORF	lmo0904	hypothetical protein - RAST_Product: FIG00774158: hypothetical protein	FIG00774158: hypothetical protein		Not in COGs	ATG	 
lmo0905	941615	942112	498	+	941615	942112	498	ORF	lmo0905	hypothetical protein - RAST_Product: FIG00775034: hypothetical protein	FIG00775034: hypothetical protein	Operon_138	General function prediction only	ATG	 
lmo0906	942148	943497	1350	+	942148	943497	1350	ORF	"similar to glutathione Reductase; catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense"	glutathione reductase	Glutathione reductase (EC 1.8.1.7)	Operon_138	Energy production and conversion	ATG	 
lmo0907	943526	944200	675	+	943526	944200	675	ORF	similar to phosphoglycerate mutase	hypothetical protein - RAST_Product: Phosphoglycerate mutase family, Lmo0907 homolog	Phosphoglycerate mutase family, Lmo0907 homolog	Operon_138	Carbohydrate transport and metabolism	ATG	 
lmo0908	944243	945379	1137	-	944243	945379	1137	ORF	similar to membrane proteins	hypothetical protein - RAST_Product: UPF0118 membrane protein YrrI	UPF0118 membrane protein YrrI		General function prediction only	TTG	 
lmo0909	945520	945912	393	+	945520	945912	393	ORF	similar to transcription regulator, GntR family	hypothetical protein - RAST_Product: transcriptional regulator, GntR family	transcriptional regulator, GntR family		Transcription	ATG	 
lmo0910	945915	947018	1104	+	945915	947018	1104	ORF	lmo0910	hypothetical protein - RAST_Product: FIG00774106: hypothetical protein	FIG00774106: hypothetical protein		General function prediction only	ATG	 
lmo0911	947101	947604	504	+	947101	947604	504	ORF	lmo0911	hypothetical protein - RAST_Product: FIG00774594: hypothetical protein	FIG00774594: hypothetical protein		Function unknown	ATG	 
lmo0912	947718	948530	813	+	947718	948530	813	ORF	similar to transporters (formate)	hypothetical protein - RAST_Product: Formate efflux transporter (TC 2.A.44 family)	Formate efflux transporter (TC 2.A.44 family)		Inorganic ion transport and metabolism	GTG	 
lmo0913	948754	950220	1467	+	948754	950220	1467	ORF	similar to succinate semialdehyde dehydrogenase	"hypothetical protein - RAST_Product: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)"	"Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)"		Energy production and conversion	TTG	 
lmo0914	950363	950668	306	+	950363	950668	306	ORF	similar to PTS system, IIB component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Operon_139	Carbohydrate transport and metabolism	ATG	 
lmo0915	950673	951941	1269	+	950673	951941	1269	ORF	similar to phosphotransferase system enzyme IIC	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Operon_139	Carbohydrate transport and metabolism	ATG	 
lmo0916	951956	952306	351	+	951956	952306	351	ORF	similar to phosphotransferase system enzyme IIA	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	Operon_139	Carbohydrate transport and metabolism	ATG	 
lmo0917	952318	953769	1452	+	952318	953769	1452	ORF	similar to beta-glucosidase	hypothetical protein - RAST_Product: 6-phospho-beta-glucosidase (EC 3.2.1.86)	6-phospho-beta-glucosidase (EC 3.2.1.86)	Operon_139	Carbohydrate transport and metabolism	ATG	 
lmo0918	953842	955740	1899	+	953842	955740	1899	ORF	similar to transcription antiterminator BglG family	hypothetical protein - RAST_Product: PRD/PTS system IIA 2 domain protein	PRD/PTS system IIA 2 domain protein	Operon_139	"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo0919	956031	957602	1572	+	956031	957602	1572	ORF	similar to ABC transporter ATP-binding protein (antibiotic resistance)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein		General function prediction only	ATG	 
lmo0920	957724	958764	1041	+	957724	958764	1041	ORF	similar to B. subtilis YcgR protein	hypothetical protein - RAST_Product: possible permease	possible permease	Operon_140	General function prediction only	ATG	 
lmo0921	958783	959622	840	+	958783	959622	840	ORF	similar to B. subtilis YcgQ protein	hypothetical protein - RAST_Product: ABC transporter, substrate-binding protein	ABC transporter, substrate-binding protein	Operon_140	Function unknown	ATG	 
lmo0922	959711	960631	921	+	959711	960631	921	ORF	"similar to pantothenate kinase; catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis"	pantothenate kinase	Pantothenate kinase (EC 2.7.1.33)		Coenzyme transport and metabolism	ATG	 
lmo0923	960748	961221	474	+	960748	961221	474	ORF	similar to ABC transporter, ATP-binding protein (N-terminal part)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_141	Defense/virulence mechanisms	ATG	 
lmo0924	961203	961469	267	+	961203	961469	267	ORF		Pseudo-gene or RefSeq provisional	ABC transporter, ATP-binding protein		Not in COGs	CCC	 
lmo0925	961469	962584	1116	+	961469	962584	1116	ORF		hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_141	Defense/virulence mechanisms	ATG	 
lmo0926	962607	963263	657	+	962607	963263	657	ORF	similar to transcription regulator (TetR/AcrR family)	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Operon_141	Transcription	GTG	 
lmo0927	963294	965255	1962	-	963294	965255	1962	ORF		hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Cell wall/membrane biogenesis	ATG	 
lmo0928	965513	966136	624	+	965513	966136	624	ORF	"similar to 3-methyladenine DNA glycosylase; responsible for recognizing base lesions in the genome and initiating base excision DNA repair"	3-methyladenine DNA glycosylase	DNA-3-methyladenine glycosylase II (EC 3.2.2.21)		Replication, recombination and repair	ATG	 
lmo0929	966245	966913	669	+	966245	966913	669	ORF	similar to sortase	hypothetical protein - RAST_Product: Sortase A, LPXTG specific	Sortase A, LPXTG specific		Cell wall/membrane biogenesis	ATG	 
lmo0930	967029	967760	732	+	967029	967760	732	ORF	conserved hypothetical protein, similar to B. subtilis YhfI protein	"hypothetical protein - RAST_Product: Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein"	"Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein"	Operon_142	General function prediction only	ATG	 
lmo0931	967784	968779	996	+	967784	968779	996	ORF	similar to lipoate protein ligase A	hypothetical protein - RAST_Product: Lipoate-protein ligase A	Lipoate-protein ligase A	Operon_142	Coenzyme transport and metabolism	ATG	 
lmo0932	968819	969424	606	-	968819	969424	606	ORF		hypothetical protein - RAST_Product: FIG00774802: hypothetical protein	FIG00774802: hypothetical protein	Operon_143	Function unknown	ATG	 
lmo0933	969549	970496	948	-	969549	970496	948	ORF	similar to sugar transferase	hypothetical protein - RAST_Product: Glycosyltransferase	Glycosyltransferase	Operon_143	Cell wall/membrane biogenesis	ATG	 
lmo0934	971037	972176	1140	+	971037	972176	1140	ORF	similar to B. subtilis YhbA protein	hypothetical protein - RAST_Product: Epoxyqueuosine (oQ) reductase QueG	Epoxyqueuosine (oQ) reductase QueG	Operon_144	Energy production and conversion	ATG	 
lmo0935	972197	972706	510	+	972197	972706	510	ORF	similar to B. subtilis CspR protein, rRNA methylase homolog	hypothetical protein - RAST_Product: tRNA (cytosine34-2'-O-)-methyltransferase (EC 2.1.1.-)	tRNA (cytosine34-2'-O-)-methyltransferase (EC 2.1.1.-)	Operon_144	Translation	ATG	 
lmo0936	972719	973459	741	+	972719	973459	741	ORF	similar to Nitroflavin-reductase	hypothetical protein - RAST_Product: Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-)	Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-)	Operon_144	Energy production and conversion	ATG	 
lmo0937	973509	973670	162	-	973509	973670	162	ORF	lmo0937	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo0938	973758	974216	459	-	973758	974216	459	ORF	similar to protein-tyrosine-phosphatase	hypothetical protein - RAST_Product: Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	Operon_145	Signal transduction mechanisms	TTG	 
lmo0939	974229	974975	747	-	974229	974975	747	ORF	lmo0939	hypothetical protein - RAST_Product: FIG00774292: hypothetical protein	FIG00774292: hypothetical protein	Operon_145	Not in COGs	ATG	 
lmo0940	975071	976033	963	-	975071	976033	963	ORF	lmo0940	hypothetical protein - RAST_Product: FIG00775436: hypothetical protein	FIG00775436: hypothetical protein	Operon_146	Not in COGs	ATG	 
lmo0941	976065	977039	975	-	976065	977039	975	ORF	lmo0941	hypothetical protein	FIG00774281: hypothetical protein	Operon_146	Not in COGs	ATG	 
lmo0942	977051	978856	1806	-	977051	978856	1806	ORF	similar to heat shock protein HtpG	HSP90 family protein	Chaperone protein HtpG	Operon_146	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0943	979059	979529	471	+	979059	979529	471	ORF		non-heme iron-binding ferritin	Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)		Inorganic ion transport and metabolism	ATG	 
lmo0944	979762	980064	303	+	979762	980064	303	ORF	similar to B. subtilis YneR protein	hypothetical protein - RAST_Product: FIG00774409: hypothetical protein	FIG00774409: hypothetical protein		Function unknown	ATG	 
lmo0945	980177	981307	1131	+	980177	981307	1131	ORF	similar to C-terminal part of B. subtilis ComEC protein and to ComEA	hypothetical protein - RAST_Product: Late competence protein ComEC, DNA transport	Late competence protein ComEC, DNA transport		"Replication, recombination and repair; General function prediction only;"	ATG	 
lmo0946	981317	981544	228	+	981317	981544	228	ORF	lmo0946	hypothetical protein - RAST_Product: FIG00774413: hypothetical protein	FIG00774413: hypothetical protein		Not in COGs	ATG	 
lmo0947	981743	982960	1218	-	981743	982960	1218	ORF	hypothetical transport protein	hypothetical protein - RAST_Product: Cyanate permease	Cyanate permease	Operon_147	Inorganic ion transport and metabolism	ATG	 
lmo0948	982957	983646	690	-	982957	983646	690	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: transcriptional regulator, GntR family	transcriptional regulator, GntR family	Operon_147	Transcription	ATG	 
lmo0949	983768	984814	1047	+	983768	984814	1047	ORF		hypothetical protein - RAST_Product: FIG00774130: hypothetical protein	FIG00774130: hypothetical protein		General function prediction only	ATG	 
lmo0950	984823	985722	900	-	984823	985722	900	ORF	lmo0950	hypothetical protein - RAST_Product: Cell surface hydrolase, membrane-bound	Cell surface hydrolase, membrane-bound	Operon_148	General function prediction only	ATG	 
lmo0951	985743	986564	822	-	985743	986564	822	ORF	lmo0951	hypothetical protein - RAST_Product: Cell surface hydrolase, membrane-bound	Cell surface hydrolase, membrane-bound	Operon_148	General function prediction only	ATG	 
lmo0952	986722	987180	459	+	986722	987180	459	ORF	lmo0952	hypothetical protein - RAST_Product: FIG00774549: hypothetical protein	FIG00774549: hypothetical protein		Not in COGs	ATG	 
lmo0953	987274	987501	228	+	987274	987501	228	ORF	lmo0953	hypothetical protein - RAST_Product: FIG00774407: hypothetical protein	FIG00774407: hypothetical protein		Not in COGs	GTG	 
lmo0954	987735	988049	315	+	987735	988049	315	ORF	lmo0954	hypothetical protein - RAST_Product: FIG00774399: hypothetical protein	FIG00774399: hypothetical protein	Operon_149	Not in COGs	ATG	 
lmo0955	988065	988910	846	+	988065	988910	846	ORF	lmo0955	hypothetical protein - RAST_Product: FIG00774456: hypothetical protein	FIG00774456: hypothetical protein	Operon_149	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo0956	989099	990232	1134	+	989099	990232	1134	ORF	similar to N-acetylglucosamine-6P-phosphate deacetylase (EC 3.5.1.25)	hypothetical protein - RAST_Product: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Operon_150	Carbohydrate transport and metabolism	ATG	 
lmo0957	990248	990952	705	+	990248	990952	705	ORF	similar to glucosamine-6-Phoasphate isomerase (EC 5.3.1.10)	hypothetical protein - RAST_Product: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Operon_150	Carbohydrate transport and metabolism	ATG	 
lmo0958	990968	991690	723	+	990968	991690	723	ORF	similar to transcription regulator (GntR family)	hypothetical protein - RAST_Product: Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family	Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family	Operon_150	Transcription	ATG	 
lmo0959	991810	992865	1056	+	991810	992865	1056	ORF	similar to undacaprenyl-phosphate N-acetylglucosaminyltransferase	hypothetical protein - RAST_Product: Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)		Cell wall/membrane biogenesis	ATG	 
lmo0960	992978	993886	909	+	992978	993886	909	ORF	similar to proteases	hypothetical protein - RAST_Product: peptidase, U32 family small subunit [C1]	peptidase, U32 family small subunit [C1]	Operon_151	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0961	993900	995126	1227	+	993900	995126	1227	ORF	similar to proteases	hypothetical protein - RAST_Product: peptidase, U32 family large subunit [C1]	peptidase, U32 family large subunit [C1]	Operon_151	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0962	995210	995767	558	+	995210	995767	558	ORF		epitope LemA	LemA protein	Operon_152	Function unknown	ATG	 
lmo0963	995790	996704	915	+	995790	996704	915	ORF	"similar to putative heat shock protein HtpX, Listeria epitope LemB; putative metalloprotease"	heat shock protein HtpX	Heat shock protein HtpX (EC 3.4.24.-)	Operon_152	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0964	996739	997557	819	-	996739	997557	819	ORF	similar to B. subtilis YjbH protein	hypothetical protein - RAST_Product: YjbH-like, GTP pyrophosphokinase domain	YjbH-like, GTP pyrophosphokinase domain		Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo0965	997795	998379	585	-	997795	998379	585	ORF	similar to B. subtilis YjbK protein	hypothetical protein - RAST_Product: Adenylate cyclase	Adenylate cyclase	Operon_153	Function unknown	ATG	 
lmo0966	998396	998863	468	-	998396	998863	468	ORF	lmo0966	hypothetical protein - RAST_Product: FIG00774263: hypothetical protein	FIG00774263: hypothetical protein	Operon_153	General function prediction only	ATG	 
lmo0967	999022	999690	669	+	999022	999690	669	ORF	similar to B. subtilis YjbM protein	hypothetical protein - RAST_Product: GTP pyrophosphokinase (EC 2.7.6.5)	GTP pyrophosphokinase (EC 2.7.6.5)	Operon_154	Function unknown	TTG	 
lmo0968	999722	1000516	795	+	999722	1000516	795	ORF	"Probable inorganic polyphosphate/ATP-NAD kinase 1; catalyzes the phosphorylation of NAD to NADP"	inorganic polyphosphate/ATP-NAD kinase	NAD kinase (EC 2.7.1.23)	Operon_154	Carbohydrate transport and metabolism	ATG	 
lmo0969	1000535	1001425	891	+	1000535	1001425	891	ORF	similar to ribosomal large subunit pseudouridine synthetase	hypothetical protein - RAST_Product: Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type	Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type	Operon_154	Translation	GTG	 
lmo0970	1001503	1002291	789	+	1001503	1002291	789	ORF	"similar to enoyl- acyl-carrier protein reductase; Catalyzes a key regulatory step in fatty acid biosynthesis"	enoyl-(acyl carrier protein) reductase	Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)	Operon_154	Lipid transport and metabolism	ATG	 
lmo0971	1002319	1003593	1275	-	1002319	1003593	1275	ORF		DltD protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid	Poly(glycerophosphate chain) D-alanine transfer protein DltD	Operon_155	Cell wall/membrane biogenesis	ATG	 
lmo0972	1003593	1003829	237	-	1003593	1003829	237	ORF	"D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid"	D-alanine--poly(phosphoribitol) ligase subunit 2	D-alanine--poly(phosphoribitol) ligase subunit 2 (EC 6.1.1.13)	Operon_155	Cell wall/membrane biogenesis	ATG	 
lmo0973	1003855	1005039	1185	-	1003855	1005039	1185	ORF		DltB protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid	D-alanyl transfer protein DltB	Operon_155	Cell wall/membrane biogenesis	GTG	 
lmo0974	1005036	1006568	1533	-	1005036	1006568	1533	ORF	transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid	D-alanine--poly(phosphoribitol) ligase subunit 1	D-alanine--poly(phosphoribitol) ligase subunit 1 (EC 6.1.1.13)	Operon_155	Cell wall/membrane biogenesis	ATG	 
lmo0975	1006959	1007633	675	+	1006959	1007633	675	ORF	"similar to ribose 5-phosphate isomerase; Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway"	ribose-5-phosphate isomerase A	Ribose 5-phosphate isomerase A (EC 5.3.1.6)		Carbohydrate transport and metabolism	ATG	 
lmo0976	1007669	1008112	444	-	1007669	1008112	444	ORF	similar to B. subtilis YjcF protein	hypothetical protein - RAST_Product: GNAT family acetyltransferase YjcF	GNAT family acetyltransferase YjcF	Operon_156	"Transcription; General function prediction only;"	TTG	 
lmo0977	1008130	1008879	750	-	1008130	1008879	750	ORF	similar to B. subtilis YjcH protein	hypothetical protein - RAST_Product: Putative acetyl esterase YjcH (EC 3.1.1.-)	Putative acetyl esterase YjcH (EC 3.1.1.-)	Operon_156	Inorganic ion transport and metabolism	ATG	 
lmo0978	1009098	1010117	1020	+	1009098	1010117	1020	ORF	"similar to branched-chain amino acid aminotransferase; catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids"	branched-chain amino acid aminotransferase	Branched-chain amino acid aminotransferase (EC 2.6.1.42)		"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo0979	1010313	1011077	765	+	1010313	1011077	765	ORF	similar to daunorubicin resistance ATP-binding proteins	hypothetical protein - RAST_Product: Methionine ABC transporter ATP-binding protein	Methionine ABC transporter ATP-binding protein		Defense/virulence mechanisms	ATG	 
lmo0980	1011074	1011826	753	+	1011074	1011826	753	ORF	similar to ABC transporter transmembrane component	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein		Defense/virulence mechanisms	ATG	 
lmo0981	1011860	1013335	1476	-	1011860	1013335	1476	ORF	similar to efflux transporter	hypothetical protein - RAST_Product: drug resistance transporter, EmrB/QacA family	drug resistance transporter, EmrB/QacA family		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	TTG	 
lmo0982	1013475	1014527	1053	+	1013475	1014527	1053	ORF	similar to glucanase and peptidase	hypothetical protein - RAST_Product: Deblocking aminopeptidase (EC 3.4.11.-)	Deblocking aminopeptidase (EC 3.4.11.-)	Operon_157	Carbohydrate transport and metabolism	TTG	 
lmo0983	1014540	1015019	480	+	1014540	1015019	480	ORF	similar to glutathione peroxidase	hypothetical protein - RAST_Product: Glutathione peroxidase (EC 1.11.1.9)	Glutathione peroxidase (EC 1.11.1.9)	Operon_157	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0984	1015153	1015608	456	+	1015153	1015608	456	ORF	weakly similar to two-component response regulator	hypothetical protein - RAST_Product: FIG00774165: hypothetical protein	FIG00774165: hypothetical protein		"Transcription; Signal transduction mechanisms;"	ATG	 
lmo0985	1015605	1016033	429	+	1015605	1016033	429	ORF	lmo0985	hypothetical protein - RAST_Product: FIG00774691: hypothetical protein	FIG00774691: hypothetical protein		Not in COGs	ATG	 
lmo0986	1016030	1016941	912	+	1016030	1016941	912	ORF	similar to antibiotic ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Methionine ABC transporter ATP-binding protein	Methionine ABC transporter ATP-binding protein		Defense/virulence mechanisms	ATG	 
lmo0987	1016934	1017788	855	+	1016934	1017788	855	ORF	similar to Streptococcus agalactiae CylB protein	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein		Defense/virulence mechanisms	ATG	 
lmo0988	1017870	1019438	1569	+	1017870	1019438	1569	ORF	"similar to peptide chain release factor 3 (RF-3); stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein"	peptide chain release factor 3	Peptide chain release factor 3		Translation	ATG	 
lmo0989	1019545	1019970	426	+	1019545	1019970	426	ORF	similar to regulatory proteins (MarR family)	hypothetical protein - RAST_Product: Transcriptional regulator, MarR family	Transcriptional regulator, MarR family		Transcription	GTG	 
lmo0990	1020022	1021383	1362	+	1020022	1021383	1362	ORF		hypothetical protein - RAST_Product: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps		Defense/virulence mechanisms	ATG	 
lmo0991	1021665	1022432	768	+	1021665	1022432	768	ORF		hypothetical protein - RAST_Product: TerC-like integral membrane protein	TerC-like integral membrane protein	Operon_158	Inorganic ion transport and metabolism	GTG	 
lmo0992	1022535	1023302	768	+	1022535	1023302	768	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_158	Inorganic ion transport and metabolism	ATG	 
lmo0993	1023346	1024680	1335	+	1023346	1024680	1335	ORF	similar to Na+-transporting ATP synthase subunit J	hypothetical protein	Potassium uptake protein, integral membrane component, KtrD	Operon_158	Inorganic ion transport and metabolism	TTG	 
lmo0994	1024761	1025129	369	-	1024761	1025129	369	ORF	lmo0994	hypothetical protein - RAST_Product: FIG00774070: hypothetical protein	FIG00774070: hypothetical protein		Not in COGs	ATG	 
lmo0995	1025159	1026190	1032	-	1025159	1026190	1032	ORF	similar to B. subtilis YkrP protein	hypothetical protein - RAST_Product: membrane protein	membrane protein		Carbohydrate transport and metabolism	ATG	 
lmo0996	1026376	1026855	480	+	1026376	1026855	480	ORF	similar to methylated-DNA-protein-cystein methyltransferase	hypothetical protein - RAST_Product: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)		Replication, recombination and repair	ATG	 
lmo0997	1026871	1029045	2175	-	1026871	1029045	2175	ORF		ATP-dependent protease	ATP-dependent Clp protease ATP-binding subunit ClpA		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo0998	1029208	1029819	612	-	1029208	1029819	612	ORF	similar to hypothetical protein	hypothetical protein	CAAX amino terminal protease family protein		General function prediction only	TTG	 
lmo0999	1029965	1030756	792	+	1029965	1030756	792	ORF	lmo0999	hypothetical protein - RAST_Product: FIG00774331: hypothetical protein	FIG00774331: hypothetical protein		Not in COGs	ATG	 
lmo1000	1030757	1032229	1473	-	1030757	1032229	1473	ORF	similar to phytoene dehydrogenase	hypothetical protein	Phytoene dehydrogenase and related proteins		Secondary metabolites biosynthesis, transport and catabolism	TTG	 
lmo1001	1032333	1032617	285	-	1032333	1032617	285	ORF	similar to B. subtilis protein YkvS	hypothetical protein	FIG00774146: hypothetical protein		Function unknown	ATG	 
lmo1002	1032924	1033190	267	+	1032924	1033190	267	ORF		phosphocarrier protein HPr	Phosphotransferase system, phosphocarrier protein HPr	Operon_159	Carbohydrate transport and metabolism	ATG	 
lmo1003	1033190	1034908	1719	+	1033190	1034908	1719	ORF		phosphotransferase system enzyme I	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	Operon_159	Carbohydrate transport and metabolism	ATG	 
lmo1004	1035021	1036055	1035	+	1035021	1036055	1035	ORF		hypothetical protein	FIG00774338: hypothetical protein	Operon_160	Function unknown	TTG	 
lmo1005	1036068	1036928	861	+	1036068	1036928	861	ORF	similar to 3-hydroxyisobutyrate dehydrogenase (B. subtilis YkwC protein)	hypothetical protein - RAST_Product: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	Operon_160	Lipid transport and metabolism	ATG	 
lmo1006	1036971	1038116	1146	-	1036971	1038116	1146	ORF	similar to aminotransferases (to B. subtilis PatA protein)	hypothetical protein - RAST_Product: N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-)	N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-)		Amino acid transport and metabolism	ATG	 
lmo1007	1038336	1038557	222	+	1038336	1038557	222	ORF	lmo1007	hypothetical protein - RAST_Product: FIG00775035: hypothetical protein	FIG00775035: hypothetical protein		Not in COGs	ATG	 
lmo1008	1038863	1039096	234	+	1038863	1039096	234	ORF	similar to B. subtilis YkuJ protein	hypothetical protein - RAST_Product: FIG00775017: hypothetical protein	FIG00775017: hypothetical protein		Function unknown	ATG	 
lmo1009	1039297	1039749	453	+	1039297	1039749	453	ORF	similar to B. subtilis YkuL protein	hypothetical protein - RAST_Product: FIG042801: CBS domain containing protein	FIG042801: CBS domain containing protein	Operon_161	General function prediction only	ATG	 
lmo1010	1039746	1040624	879	+	1039746	1040624	879	ORF	similar to transcription regulator (LysR family).	hypothetical protein - RAST_Product: Cys regulon transcriptional activator CysB	Cys regulon transcriptional activator CysB	Operon_161	Transcription	ATG	 
lmo1011	1040672	1041382	711	+	1040672	1041382	711	ORF	similar to tetrahydrodipicolinate succinylase	hypothetical protein - RAST_Product: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	Operon_161	Amino acid transport and metabolism	ATG	 
lmo1012	1041446	1042561	1116	+	1041446	1042561	1116	ORF	similar to N-acyl-L-amino acid amidohydrolases	hypothetical protein - RAST_Product: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	Operon_161	General function prediction only	GTG	 
lmo1013	1042605	1043450	846	-	1042605	1043450	846	ORF	similar to conserved hypothetical proteins like to B. subtilis YkuT protein	hypothetical protein	Potassium efflux system KefA protein / Small-conductance mechanosensitive channel		Cell wall/membrane biogenesis	ATG	 
lmo1014	1043821	1045014	1194	+	1043821	1045014	1194	ORF	highly similar to glycine betaine ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32)	Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32)	Operon_162	Amino acid transport and metabolism	TTG	 
lmo1015	1045007	1045855	849	+	1045007	1045855	849	ORF	highly similar to glycine betaine ABC transporters (permease)	hypothetical protein - RAST_Product: Glycine betaine ABC transport system, permease protein OpuAB	Glycine betaine ABC transport system, permease protein OpuAB	Operon_162	Amino acid transport and metabolism	ATG	 
lmo1016	1045869	1046771	903	+	1045869	1046771	903	ORF	highly similar to glycine betaine ABC transporters (glycine betaine-binding protein)	hypothetical protein - RAST_Product: Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC	Operon_162	Amino acid transport and metabolism	TTG	 
lmo1017	1046886	1047377	492	+	1046886	1047377	492	ORF	similar to phosphotransferase system glucose-specific enzyme IIA	hypothetical protein - RAST_Product: PTS system, glucose-specific IIA component (EC 2.7.1.69)	PTS system, glucose-specific IIA component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo1018	1047490	1048185	696	+	1047490	1048185	696	ORF	similar to E. coli copper homeostasis protein CutC	hypothetical protein - RAST_Product: Cytoplasmic copper homeostasis protein cutC	Cytoplasmic copper homeostasis protein cutC	Operon_163	Inorganic ion transport and metabolism	ATG	 
lmo1019	1048266	1049138	873	+	1048266	1049138	873	ORF	similar to B. subtilis YitL protein	hypothetical protein - RAST_Product: S1 RNA binding domain	S1 RNA binding domain	Operon_163	Function unknown	GTG	 
lmo1020	1049273	1049986	714	+	1049273	1049986	714	ORF	similar to B. subtilis YvqF protein	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_163	Function unknown	TTG	 
lmo1021	1049983	1051041	1059	+	1049983	1051041	1059	ORF	similar to two-component sensor histidine kinase in particular B. subtilis YvqE protein	hypothetical protein - RAST_Product: histidine kinase, putative	histidine kinase, putative	Operon_163	Signal transduction mechanisms	ATG	 
lmo1022	1051038	1051676	639	+	1051038	1051676	639	ORF	similar to two-component response regulator, in particular B. subtilis YvqC protein	hypothetical protein - RAST_Product: DNA-binding response regulator	DNA-binding response regulator	Operon_163	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1023	1051695	1052354	660	+	1051695	1052354	660	ORF	similar to a bacterial K(+)-uptake system	hypothetical protein - RAST_Product: Trk system potassium uptake protein TrkA	Trk system potassium uptake protein TrkA	Operon_163	Inorganic ion transport and metabolism	ATG	 
lmo1024	1052509	1053429	921	+	1052509	1053429	921	ORF	lmo1024	hypothetical protein - RAST_Product: FIG00774894: hypothetical protein	FIG00774894: hypothetical protein	Operon_164	Not in COGs	ATG	 
lmo1025	1053426	1054277	852	+	1053426	1054277	852	ORF	lmo1025	hypothetical protein - RAST_Product: FIG00774689: hypothetical protein	FIG00774689: hypothetical protein	Operon_164	Function unknown	ATG	 
lmo1026	1054319	1055284	966	-	1054319	1055284	966	ORF	similar to B. subtilis LytR protein	hypothetical protein - RAST_Product: Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 (as in PMID19099556)	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 (as in PMID19099556)		Transcription	ATG	 
lmo1027	1055393	1057060	1668	-	1055393	1057060	1668	ORF	similar to conserved hypothetical proteins (in particular B. subtilis YkqC)	hypothetical protein - RAST_Product: Ribonuclease J1 (endonuclease and 5' exonuclease)	Ribonuclease J1 (endonuclease and 5' exonuclease)	Operon_165	General function prediction only	ATG	 
lmo1028	1057067	1057276	210	-	1057067	1057276	210	ORF	similar to B. subtilis YkzG protein	hypothetical protein - RAST_Product: Protein of unknown function DUF1447	Protein of unknown function DUF1447	Operon_165	Function unknown	ATG	 
lmo1029	1057761	1058531	771	+	1057761	1058531	771	ORF		hypothetical protein - RAST_Product: Hydrolase (HAD superfamily) in cluster with DUF1447	Hydrolase (HAD superfamily) in cluster with DUF1447		General function prediction only	ATG	 
lmo1030	1058580	1059608	1029	-	1058580	1059608	1029	ORF	similar to transcriptional regulator, LacI family	hypothetical protein - RAST_Product: Unknown pentose utilization regulator, LacI family	Unknown pentose utilization regulator, LacI family		Transcription	ATG	 
lmo1031	1059872	1061275	1404	+	1059872	1061275	1404	ORF		hypothetical protein - RAST_Product: Unknown pentose isomerase TM0951	Unknown pentose isomerase TM0951	Operon_166	Carbohydrate transport and metabolism	ATG	 
lmo1032	1061291	1062115	825	+	1061291	1062115	825	ORF	similar to transketolase	hypothetical protein - RAST_Product: Transketolase, N-terminal section (EC 2.2.1.1)	Transketolase, N-terminal section (EC 2.2.1.1)	Operon_166	Carbohydrate transport and metabolism	ATG	 
lmo1033	1062108	1063064	957	+	1062108	1063064	957	ORF	similar to transketolase	hypothetical protein - RAST_Product: Transketolase, C-terminal section (EC 2.2.1.1)	Transketolase, C-terminal section (EC 2.2.1.1)	Operon_166	Carbohydrate transport and metabolism	ATG	 
lmo1034	1063061	1064524	1464	+	1063061	1064524	1464	ORF	similar to glycerol kinase	hypothetical protein - RAST_Product: Unknown pentose kinase TM0952	Unknown pentose kinase TM0952	Operon_166	Energy production and conversion	ATG	 
lmo1035	1064521	1066377	1857	+	1064521	1066377	1857	ORF	similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIABC	hypothetical protein - RAST_Product: PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)	PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)	Operon_166	Carbohydrate transport and metabolism	ATG	 
lmo1036	1066397	1067662	1266	+	1066397	1067662	1266	ORF	lmo1036	hypothetical protein - RAST_Product: FIG00774052: hypothetical protein	FIG00774052: hypothetical protein	Operon_166	Not in COGs	ATG	 
lmo1037	1067723	1068526	804	-	1067723	1068526	804	ORF	highly similar to B. subtilis YoaT protein	hypothetical protein - RAST_Product: membrane protein, putative	membrane protein, putative		Function unknown	ATG	 
lmo1038	1068594	1069175	582	-	1068594	1069175	582	ORF	weakly similar to molybdopterin-guanine dinucleotide biosynthesis protein A	hypothetical protein - RAST_Product: Molybdopterin-guanine dinucleotide biosynthesis protein MobA	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	Operon_167	Coenzyme transport and metabolism	TTG	 
lmo1039	1069156	1069818	663	-	1069156	1069818	663	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Operon_167	Amino acid transport and metabolism	ATG	 
lmo1040	1069821	1070492	672	-	1069821	1070492	672	ORF	similar to molybdenum ABC transporters (permease)	hypothetical protein - RAST_Product: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Operon_167	Inorganic ion transport and metabolism	ATG	 
lmo1041	1070597	1071367	771	+	1070597	1071367	771	ORF	similar to molybdate ABC transporter binding protein	hypothetical protein - RAST_Product: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Operon_168	Inorganic ion transport and metabolism	ATG	 
lmo1042	1071462	1072685	1224	+	1071462	1072685	1224	ORF	similar to molybdopterin biosynthesis protein moeA	hypothetical protein - RAST_Product: Molybdopterin biosynthesis protein MoeA	Molybdopterin biosynthesis protein MoeA	Operon_168	Coenzyme transport and metabolism	ATG	 
lmo1043	1072664	1073149	486	+	1072664	1073149	486	ORF	similar to molybdopterin-guanine dinucleotide biosynthesis MobB	hypothetical protein - RAST_Product: Molybdopterin-guanine dinucleotide biosynthesis protein MobB	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	Operon_168	Coenzyme transport and metabolism	ATG	 
lmo1044	1073146	1073568	423	+	1073146	1073568	423	ORF	similar to molybdopterin converting factor, subunit 2	hypothetical protein - RAST_Product: Molybdenum cofactor biosynthesis protein MoaE	Molybdenum cofactor biosynthesis protein MoaE	Operon_168	Coenzyme transport and metabolism	ATG	 
lmo1045	1073552	1073800	249	+	1073552	1073800	249	ORF	similar to molybdopterin converting factor (subunit 1).	hypothetical protein - RAST_Product: Molybdenum cofactor biosynthesis protein MoaD	Molybdenum cofactor biosynthesis protein MoaD	Operon_168	Coenzyme transport and metabolism	ATG	 
lmo1046	1073813	1074295	483	+	1073813	1074295	483	ORF	"similar to molybdenum cofactor biosynthesis protein C; MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis"	molybdenum cofactor biosynthesis protein MoaC	Molybdenum cofactor biosynthesis protein MoaC	Operon_168	Coenzyme transport and metabolism	ATG	 
lmo1047	1074324	1075325	1002	+	1074324	1075325	1002	ORF	"similar to molybdenum cofactor biosynthesis protein A; together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z"	molybdenum cofactor biosynthesis protein A	Molybdenum cofactor biosynthesis protein MoaA	Operon_168	Coenzyme transport and metabolism	ATG	 
lmo1048	1075360	1075848	489	-	1075360	1075848	489	ORF	similar to molybdenum cofactor biosynthesis protein B	hypothetical protein - RAST_Product: Molybdenum cofactor biosynthesis protein MoaB	Molybdenum cofactor biosynthesis protein MoaB	Operon_169	Coenzyme transport and metabolism	ATG	 
lmo1049	1075860	1076858	999	-	1075860	1076858	999	ORF	similar to molybdopterin biosynthesis protein MoeB	hypothetical protein - RAST_Product: Molybdopterin biosynthesis protein MoeB	Molybdopterin biosynthesis protein MoeB	Operon_169	Coenzyme transport and metabolism	TTG	 
lmo1050	1076989	1077543	555	+	1076989	1077543	555	ORF	similar to B. subtilis YdfE protein	hypothetical protein - RAST_Product: FIG00774848: hypothetical protein	FIG00774848: hypothetical protein		General function prediction only	ATG	 
lmo1051	1077592	1078143	552	-	1077592	1078143	552	ORF	"similar to formylmethionine deformylase and to B. subtilis YkrB protein; cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)"	peptide deformylase	Peptide deformylase (EC 3.5.1.88)		Translation	ATG	 
lmo1052	1078977	1080092	1116	+	1078977	1080092	1116	ORF	highly similar to pyruvate dehydrogenase (E1 alpha subunit)	hypothetical protein - RAST_Product: Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1)	Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1)	Operon_170	Energy production and conversion	ATG	 
lmo1053	1080095	1081072	978	+	1080095	1081072	978	ORF	highly similar to pyruvate dehydrogenase (E1 beta subunit)	hypothetical protein - RAST_Product: Pyruvate dehydrogenase E1 component beta subunit (EC 1.2.4.1)	Pyruvate dehydrogenase E1 component beta subunit (EC 1.2.4.1)	Operon_170	Energy production and conversion	ATG	 
lmo1054	1081183	1082817	1635	+	1081183	1082817	1635	ORF	"highly similar to pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit); Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA"	dihydrolipoamide acetyltransferase	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	Operon_170	Energy production and conversion	ATG	 
lmo1055	1082822	1084225	1404	+	1082822	1084225	1404	ORF	"highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex; E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide"	dihydrolipoamide dehydrogenase	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	Operon_170	Energy production and conversion	ATG	 
lmo1056	1084413	1084724	312	+	1084413	1084724	312	ORF	lmo1056	hypothetical protein	FIG00774257: hypothetical protein		Not in COGs	ATG	 
lmo1057	1084853	1085806	954	+	1084853	1085806	954	ORF	similar to L-lactate dehydrogenase	hypothetical protein - RAST_Product: lactate/malate dehydrogenase family protein	lactate/malate dehydrogenase family protein	Operon_171	Energy production and conversion	ATG	 
lmo1058	1085806	1086078	273	+	1085806	1086078	273	ORF	similar to B. subtilis YktA protein	hypothetical protein - RAST_Product: FIG006438: hypothetical protein	FIG006438: hypothetical protein	Operon_171	Function unknown	ATG	 
lmo1059	1086100	1086630	531	+	1086100	1086630	531	ORF	lmo1059	hypothetical protein - RAST_Product: FIG00774782: hypothetical protein	FIG00774782: hypothetical protein	Operon_171	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1060	1086772	1087434	663	+	1086772	1087434	663	ORF	similar to transcription response regulator	hypothetical protein - RAST_Product: Two-component response regulator	Two-component response regulator	Operon_172	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1061	1087409	1088854	1446	+	1087409	1088854	1446	ORF	similar to two-component sensor histidine kinase	hypothetical protein	HAMP domain protein	Operon_172	Signal transduction mechanisms	GTG	 
lmo1062	1088941	1090362	1422	+	1088941	1090362	1422	ORF	similar to ABC transporters (permease protein)	hypothetical protein - RAST_Product: ABC transporters (permease protein), putattive	ABC transporters (permease protein), putattive		Defense/virulence mechanisms	ATG	 
lmo1063	1090375	1091043	669	+	1090375	1091043	669	ORF	similar to ABC transporter (ATP binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP binding protein	ABC transporter, ATP binding protein		Defense/virulence mechanisms	ATG	 
lmo1064	1091110	1092054	945	-	1091110	1092054	945	ORF	similar to membrane and transport proteins	hypothetical protein - RAST_Product: Magnesium and cobalt transport protein CorA	Magnesium and cobalt transport protein CorA	Operon_173	Inorganic ion transport and metabolism	ATG	 
lmo1065	1092255	1092869	615	-	1092255	1092869	615	ORF	similar to B. subtilis YktB protein	hypothetical protein - RAST_Product: FIG00774309: hypothetical protein	FIG00774309: hypothetical protein	Operon_173	Function unknown	ATG	 
lmo1066	1093000	1093773	774	+	1093000	1093773	774	ORF	similar to extragenic suppressor protein SuhB and to myo-inositol-1(or 4)-monophosphatase	hypothetical protein - RAST_Product: Inositol-1-monophosphatase (EC 3.1.3.25)	Inositol-1-monophosphatase (EC 3.1.3.25)		Carbohydrate transport and metabolism	ATG	 
lmo1067	1093965	1095803	1839	+	1093965	1095803	1839	ORF	similar to GTP-binding elongation factor	hypothetical protein - RAST_Product: GTP-binding protein TypA/BipA	GTP-binding protein TypA/BipA		Signal transduction mechanisms	TTG	 
lmo1068	1095975	1096835	861	+	1095975	1096835	861	ORF	lmo1068	hypothetical protein - RAST_Product: FIG00775152: hypothetical protein	FIG00775152: hypothetical protein		Not in COGs	ATG	 
lmo1069	1096874	1097116	243	-	1096874	1097116	243	ORF	similar to B. subtilis YlaI protein	hypothetical protein - RAST_Product: FIG00774805: hypothetical protein	FIG00774805: hypothetical protein		Function unknown	TTG	 
lmo1070	1097322	1097603	282	+	1097322	1097603	282	ORF	"similar to B. subtilis YlaN protein; depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; putative ligand binding protein"	hypothetical protein - RAST_Product: Conserved hypothetical protein YlaN	Conserved hypothetical protein YlaN		Function unknown	ATG	 
lmo1071	1097786	1098988	1203	+	1097786	1098988	1203	ORF	similar to cell-division protein RodA and FtsW	hypothetical protein - RAST_Product: Cell division protein FtsW	Cell division protein FtsW		Cell cycle control, mitosis and meiosis	ATG	 
lmo1072	1099266	1102706	3441	+	1099266	1102706	3441	ORF	"highly similar to pyruvate carboxylase; biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate"	pyruvate carboxylase	Pyruvate carboxyl transferase (EC 6.4.1.1)		Energy production and conversion	ATG	 
lmo1073	1102858	1103757	900	+	1102858	1103757	900	ORF	similar to metal binding protein (ABC transporter)	hypothetical protein - RAST_Product: Vitamin B12 ABC transporter, B12-binding component BtuF	Vitamin B12 ABC transporter, B12-binding component BtuF		Inorganic ion transport and metabolism	ATG	 
lmo1074	1104048	1104851	804	+	1104048	1104851	804	ORF	highly similar to teichoic acid translocation permease protein TagG	hypothetical protein - RAST_Product: Teichoic acid translocation permease protein TagG	Teichoic acid translocation permease protein TagG	Operon_174	"Carbohydrate transport and metabolism; Cell wall/membrane biogenesis;"	GTG	 
lmo1075	1104863	1105864	1002	+	1104863	1105864	1002	ORF	similar to teichoic acid translocation ATP-binding protein TagH (ABC transporter)	hypothetical protein - RAST_Product: Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	Operon_174	"Carbohydrate transport and metabolism; Cell wall/membrane biogenesis;"	ATG	 
lmo1076	1106041	1107759	1719	+	1106041	1107759	1719	ORF	similar to autolysin (EC 3.5.1.28) (N-acetylmuramoyl-L-alanine amidase)	hypothetical protein - RAST_Product: N-acetylglucosaminidase (EC 3.2.1.96) Auto # frameshift	N-acetylglucosaminidase (EC 3.2.1.96) Auto # frameshift		Cell wall/membrane biogenesis	ATG	 
lmo1077	1107975	1109663	1689	+	1107975	1109663	1689	ORF	similar to teichoic acid biosynthesis protein B	hypothetical protein - RAST_Product: Putative polyribitolphosphotransferase	Putative polyribitolphosphotransferase		Cell wall/membrane biogenesis	ATG	 
lmo1078	1109705	1110577	873	-	1109705	1110577	873	ORF	similar to putative UDP-glucose pyrophosphorylases	hypothetical protein - RAST_Product: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)	UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)		Cell wall/membrane biogenesis	ATG	 
lmo1079	1110769	1113627	2859	+	1110769	1113627	2859	ORF	similar to B. subtilis YfhO protein	hypothetical protein - RAST_Product: FIG028455: hypothetical protein	FIG028455: hypothetical protein		Function unknown	ATG	 
lmo1080	1113759	1115630	1872	+	1113759	1115630	1872	ORF	similar to B. subtilis minor teichoic acids biosynthesis protein GgaB	hypothetical protein - RAST_Product: glycosyl transferase	glycosyl transferase	Operon_175	Cell wall/membrane biogenesis	ATG	 
lmo1081	1115647	1116513	867	+	1115647	1116513	867	ORF	similar to glucose-1-phosphate thymidyl transferase	hypothetical protein - RAST_Product: Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	Operon_175	Cell wall/membrane biogenesis	ATG	 
lmo1082	1116532	1117092	561	+	1116532	1117092	561	ORF	similar to dTDP-sugar epimerase	hypothetical protein - RAST_Product: dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	Operon_175	Cell wall/membrane biogenesis	ATG	 
lmo1083	1117093	1118079	987	+	1117093	1118079	987	ORF	similar to dTDP-D-glucose 4,6-dehydratase	hypothetical protein - RAST_Product: dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	Operon_175	Cell wall/membrane biogenesis	ATG	 
lmo1084	1118082	1118912	831	+	1118082	1118912	831	ORF	similar to DTDP-L-rhamnose synthetase	hypothetical protein - RAST_Product: dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	Operon_175	Cell wall/membrane biogenesis	ATG	 
lmo1085	1118932	1121022	2091	+	1118932	1121022	2091	ORF	similar to teichoic acid biosynthesis protein B	hypothetical protein	CDP-ribitol:poly(ribitol phosphate) ribitol phosphotransferase		Cell wall/membrane biogenesis	ATG	 
lmo1086	1121098	1121808	711	+	1121098	1121808	711	ORF	"similar to CDP-ribitol pyrophosphorylase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers"	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	ribitol-5-phosphate cytidylyltransferase (EC 2.7.7.40)	Operon_176	Lipid transport and metabolism	ATG	 
lmo1087	1121805	1122830	1026	+	1121805	1122830	1026	ORF	similar to glucitol dehydrogenase	hypothetical protein - RAST_Product: Xylitol dehydrogenase	Xylitol dehydrogenase	Operon_176	"Amino acid transport and metabolism; General function prediction only;"	ATG	 
lmo1088	1122918	1124078	1161	+	1122918	1124078	1161	ORF	similar to teichoic acid biosynthesis protein B precursor	hypothetical protein	CDP-glycerol: N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenyl glycerophosphotransferase	Operon_177	Cell wall/membrane biogenesis	ATG	 
lmo1089	1124079	1124462	384	+	1124079	1124462	384	ORF	highly similar to glycerol-3-phosphate cytidylyltransferase (gct), CDP-glycerol pyrophosphorylase (teichoic acid biosynthesis protein D)	hypothetical protein - RAST_Product: Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	Operon_177	"Cell wall/membrane biogenesis; Lipid transport and metabolism;"	ATG	 
lmo1090	1124484	1125467	984	+	1124484	1125467	984	ORF	similar to glycosyltransferases	hypothetical protein - RAST_Product: Beta-1,3-glucosyltransferase	Beta-1,3-glucosyltransferase	Operon_177	Cell wall/membrane biogenesis	TTG	 
lmo1091	1125482	1126495	1014	+	1125482	1126495	1014	ORF	similar to glysosyltransferases	hypothetical protein - RAST_Product: Beta-1,3-glucosyltransferase	Beta-1,3-glucosyltransferase	Operon_177	Cell wall/membrane biogenesis	TTG	 
lmo1092	1126704	1128194	1491	+	1126704	1128194	1491	ORF	"conserved hypothetical protein, similar to B. subtilis YueK protein; catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate"	nicotinate phosphoribosyltransferase	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Operon_178	Coenzyme transport and metabolism	ATG	 
lmo1093	1128206	1129030	825	+	1128206	1129030	825	ORF	"similar to NH(3)-dependent NAD(+) synthetases, nitrogen regulatory protein; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers"	NAD synthetase	NAD synthetase (EC 6.3.1.5)	Operon_178	Coenzyme transport and metabolism	ATG	 
lmo1094	1129043	1129351	309	+	1129043	1129351	309	ORF	lmo1094	hypothetical protein - RAST_Product: FIG00774496: hypothetical protein	FIG00774496: hypothetical protein	Operon_178	Function unknown	ATG	 
lmo1095	1129412	1129816	405	+	1129412	1129816	405	ORF	similar to PTS system, cellobiose-specific IIB component (cel A)	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo1096	1129945	1131501	1557	+	1129945	1131501	1557	ORF	"highly similar to GMP synthetase; contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway"	GMP synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)		Nucleotide transport and metabolism	TTG	 
lmo1097	1131558	1132760	1203	-	1131558	1132760	1203	ORF	similar to integrases	hypothetical protein - RAST_Product: Integrase, superantigen-encoding pathogenicity islands SaPI	Integrase, superantigen-encoding pathogenicity islands SaPI		Replication, recombination and repair	ATG	 
lmo1098	1133466	1133696	231	-	1133466	1133696	231	ORF	highly similar to TN916 ORF8	hypothetical protein - RAST_Product: FIG00523622: hypothetical protein	FIG00523622: hypothetical protein		Not in COGs	ATG	 
lmo1099	1133698	1134117	420	-	1133698	1134117	420	ORF	similar to a protein encoded by Tn916	hypothetical protein - RAST_Product: FIG00515940: hypothetical protein	FIG00515940: hypothetical protein		"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1100	1134472	1136595	2124	-	1134472	1136595	2124	ORF		cadmium resistance protein	Cadmium-transporting ATPase (EC 3.6.3.3)		Inorganic ion transport and metabolism	ATG	 
lmo1101	1136900	1137400	501	+	1136900	1137400	501	ORF	similar to lipoprotein signal peptidase	hypothetical protein	Lipoprotein signal peptidase (EC 3.4.23.36)		"Cell wall/membrane biogenesis; Intracellular trafficking and secretion;"	ATG	 
lmo1102	1137533	1137868	336	-	1137533	1137868	336	ORF	similar to cadmium efflux system accessory proteins	hypothetical protein - RAST_Product: Cadmium efflux system accessory protein	Cadmium efflux system accessory protein		Transcription	GTG	 
lmo1103	1137997	1138914	918	-	1137997	1138914	918	ORF	highly similar to TN916 ORF13	hypothetical protein - RAST_Product: FIG00628965: hypothetical protein	FIG00628965: hypothetical protein		Not in COGs	ATG	 
lmo1104	1138930	1139940	1011	-	1138930	1139940	1011	ORF	highly similar to TN916 ORF14 and to L. monocytogenes P60 protein	hypothetical protein	lipoprotein, NLP/P60 family		Cell wall/membrane biogenesis	ATG	 
lmo1105	1139940	1142099	2160	-	1139940	1142099	2160	ORF	highly similar to TN916 ORF15	hypothetical protein - RAST_Product: membrane protein, putative	membrane protein, putative		Not in COGs	ATG	 
lmo1106	1142099	1144549	2451	-	1142099	1144549	2451	ORF	highly similar to TN916 ORF16	hypothetical protein - RAST_Product: FIG00627334: hypothetical protein	FIG00627334: hypothetical protein		General function prediction only	ATG	 
lmo1107	1144533	1144928	396	-	1144533	1144928	396	ORF	highly similar to TN916 ORF17	hypothetical protein - RAST_Product: FIG00628675: hypothetical protein	FIG00628675: hypothetical protein		Not in COGs	ATG	 
lmo1108	1145211	1145711	501	-	1145211	1145711	501	ORF	highly similar to TN916 ORF18	hypothetical protein - RAST_Product: FIG01109612: hypothetical protein	FIG01109612: hypothetical protein		General function prediction only	ATG	 
lmo1109	1145723	1145944	222	-	1145723	1145944	222	ORF	highly similar to TN916 ORF19	hypothetical protein - RAST_Product: FIG086557: Conjugation related protein	FIG086557: Conjugation related protein		Not in COGs	ATG	 
lmo1110	1145941	1146231	291	-	1145941	1146231	291	ORF		hypothetical protein			Not in COGs	ATG	 
lmo1111	1146228	1147412	1185	-	1146228	1147412	1185	ORF	highly similar to TN916 ORF20	hypothetical protein - RAST_Product: transcriptional regulator, Cro/CI family	transcriptional regulator, Cro/CI family		"Transcription; Replication, recombination and repair;"	TTG	 
lmo1112	1147603	1149003	1401	-	1147603	1149003	1401	ORF	highly similar to TN916 ORF21	hypothetical protein - RAST_Product: FIG00628088: hypothetical protein	FIG00628088: hypothetical protein		Cell cycle control, mitosis and meiosis	ATG	 
lmo1113	1149011	1149385	375	-	1149011	1149385	375	ORF	highly similar to TN916 ORF22	hypothetical protein	FIG00627694: hypothetical protein	Operon_179	Not in COGs	ATG	 
lmo1114	1149406	1149720	315	-	1149406	1149720	315	ORF	highly similar to TN916 ORF23	hypothetical protein - RAST_Product: FIG00627241: hypothetical protein	FIG00627241: hypothetical protein	Operon_179	Not in COGs	ATG	 
lmo1115	1149887	1152475	2589	-	1149887	1152475	2589	ORF	similar to fibrinogen-binding protein (LPXTG motif)	hypothetical protein	FIG00776412: hypothetical protein		Cell wall/membrane biogenesis	ATG	 
lmo1116	1153010	1153783	774	+	1153010	1153783	774	ORF	similar to regulatory proteins	hypothetical protein - RAST_Product: Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Operon_180	Transcription	ATG	 
lmo1117	1153848	1154204	357	+	1153848	1154204	357	ORF	lmo1117	hypothetical protein - RAST_Product: Glyoxalase family protein	Glyoxalase family protein	Operon_180	Amino acid transport and metabolism	ATG	 
lmo1118	1154864	1156381	1518	-	1154864	1156381	1518	ORF	lmo1118	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_181	Not in COGs	ATG	 
lmo1119	1156384	1157241	858	-	1156384	1157241	858	ORF	similar to methylases	hypothetical protein - RAST_Product: DNA-methyltransferase	DNA-methyltransferase	Operon_181	Replication, recombination and repair	ATG	 
lmo1120	1157592	1158008	417	+	1157592	1158008	417	ORF	lmo1120	hypothetical protein	hypothetical protein	Operon_182	Not in COGs	CTG	 
lmo1121	1158020	1158388	369	+	1158020	1158388	369	ORF	lmo1121	hypothetical protein - RAST_Product: FIG00774977: hypothetical protein	FIG00774977: hypothetical protein	Operon_182	Not in COGs	ATG	 
lmo1122	1158425	1158844	420	+	1158425	1158844	420	ORF	lmo1122	hypothetical protein - RAST_Product: FIG00774231: hypothetical protein	FIG00774231: hypothetical protein	Operon_182	General function prediction only	TTG	 
lmo1123	1158930	1159403	474	+	1158930	1159403	474	ORF	lmo1123	hypothetical protein - RAST_Product: FIG00774490: hypothetical protein	FIG00774490: hypothetical protein	Operon_182	Not in COGs	ATG	 
lmo1124	1159393	1159830	438	+	1159393	1159830	438	ORF	lmo1124	hypothetical protein - RAST_Product: FIG00774565: hypothetical protein	FIG00774565: hypothetical protein	Operon_182	Not in COGs	ATG	 
lmo1125	1160220	1160753	534	+	1160220	1160753	534	ORF	lmo1125	hypothetical protein - RAST_Product: FIG00774164: hypothetical protein	FIG00774164: hypothetical protein	Operon_182	Not in COGs	ATG	 
lmo1126	1160778	1161230	453	+	1160778	1161230	453	ORF	similar to E. coli YjaB protein	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_182	"Transcription; General function prediction only;"	ATG	 
lmo1127	1161220	1161675	456	+	1161220	1161675	456	ORF	lmo1127	hypothetical protein - RAST_Product: FIG00774162: hypothetical protein	FIG00774162: hypothetical protein	Operon_182	Function unknown	ATG	 
lmo1128	1161689	1162711	1023	-	1161689	1162711	1023	ORF	lmo1128	hypothetical protein	FIG00774090: hypothetical protein	Operon_183	General function prediction only	ATG	 
lmo1129	1162666	1163280	615	-	1162666	1163280	615	ORF		hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_183	General function prediction only	ATG	 
lmo1130	1163277	1163996	720	-	1163277	1163996	720	ORF	similar to transcription regulators	hypothetical protein - RAST_Product: FIG00774033: hypothetical protein	FIG00774033: hypothetical protein	Operon_183	Transcription	ATG	 
lmo1131	1164245	1165960	1716	+	1164245	1165960	1716	ORF	similar to ABC transporters, ATP-binding proteins	hypothetical protein - RAST_Product: Transport ATP-binding protein CydC	Transport ATP-binding protein CydC		"Energy production and conversion; Posttranslational modification, protein turnover, chaperones;"	ATG	 
lmo1132	1165962	1167608	1647	+	1165962	1167608	1647	ORF	similar to ABC transporters, ATP-binding proteins	hypothetical protein - RAST_Product: Transport ATP-binding protein CydD	Transport ATP-binding protein CydD		Defense/virulence mechanisms	ATG	 
lmo1133	1167645	1167953	309	-	1167645	1167953	309	ORF	similar to B. subtilis YjcS protein	hypothetical protein - RAST_Product: FIG00774449: hypothetical protein	FIG00774449: hypothetical protein		Function unknown	ATG	 
lmo1134	1168021	1168368	348	+	1168021	1168368	348	ORF	similar to regulatory proteins	hypothetical protein - RAST_Product: transcriptional regulator, MerR family	transcriptional regulator, MerR family	Operon_184	Transcription	ATG	 
lmo1135	1168390	1169541	1152	+	1168390	1169541	1152	ORF	lmo1135	hypothetical protein	FIG00774886: hypothetical protein	Operon_184	Not in COGs	ATG	 
lmo1136	1170002	1171621	1620	+	1170002	1171621	1620	ORF	similar to internalin, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo1136 homolog	Internalin-like protein (LPXTG motif) Lmo1136 homolog		Function unknown	ATG	 
lmo1137	1171662	1172009	348	-	1171662	1172009	348	ORF	lmo1137	hypothetical protein - RAST_Product: FIG00774175: hypothetical protein	FIG00774175: hypothetical protein		Function unknown	ATG	 
lmo1138	1172076	1172648	573	-	1172076	1172648	573	ORF	"similar to ATP-dependent Clp protease proteolytic component; hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates"	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)		"Posttranslational modification, protein turnover, chaperones; Intracellular trafficking and secretion;"	ATG	 
lmo1139	1172797	1173036	240	-	1172797	1173036	240	ORF	lmo1139	hypothetical protein - RAST_Product: Lmo1139 protein	Lmo1139 protein		Not in COGs	ATG	 
lmo1140	1173144	1173551	408	-	1173144	1173551	408	ORF	lmo1140	hypothetical protein - RAST_Product: FIG00774528: hypothetical protein	FIG00774528: hypothetical protein		Function unknown	ATG	 
lmo1141	1173643	1174122	480	+	1173643	1174122	480	ORF	similar to uroporphyrin-III C-methyltransferase	hypothetical protein - RAST_Product: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)	Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76)		Coenzyme transport and metabolism	ATG	 
lmo1142	1174241	1175605	1365	+	1174241	1175605	1365	ORF	similar to Salmonella enterica PduS protein	hypothetical protein	Cob(III)alamin reductase @ Cob(II)alamin reductase		Energy production and conversion	TTG	 
lmo1143	1175602	1176156	555	+	1175602	1176156	555	ORF	similar to Salmonella enterica PduT protein	hypothetical protein - RAST_Product: Propanediol utilization polyhedral body protein PduT	Propanediol utilization polyhedral body protein PduT		"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1144	1176304	1176654	351	+	1176304	1176654	351	ORF	similar to Salmonelle enterica PduU protein	hypothetical protein - RAST_Product: Propanediol utilization polyhedral body protein PduU	Propanediol utilization polyhedral body protein PduU		Amino acid transport and metabolism	ATG	 
lmo1145	1176660	1177091	432	+	1176660	1177091	432	ORF	similar to Salmonella enterica PduV protein	hypothetical protein - RAST_Product: Propanediol utilization protein PduV	Propanediol utilization protein PduV		Amino acid transport and metabolism	TTG	 
lmo1146	1177116	1177865	750	+	1177116	1177865	750	ORF	lmo1146	hypothetical protein - RAST_Product: Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis	Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis		Not in COGs	ATG	 
lmo1147	1177862	1178419	558	+	1177862	1178419	558	ORF	"similar to bifunctional cobalamin biosynthesis protein CopB, (cobinamide kinase; cobinamide phosphatase guanylyltransferase)"	hypothetical protein - RAST_Product: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)		Coenzyme transport and metabolism	ATG	 
lmo1148	1178421	1179167	747	+	1178421	1179167	747	ORF	highly similar to cobalamin (5'-phosphatase) synthetase	hypothetical protein - RAST_Product: Cobalamin synthase	Cobalamin synthase		Coenzyme transport and metabolism	ATG	 
lmo1149	1179168	1179743	576	+	1179168	1179743	576	ORF	similar to alpha-ribazole-5'-phosphatase	hypothetical protein - RAST_Product: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)		Carbohydrate transport and metabolism	GTG	 
lmo1150	1180152	1181036	885	-	1180152	1181036	885	ORF		transcriptional regulator PocR	Propanediol utilization transcriptional activator		"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1151	1181338	1181625	288	+	1181338	1181625	288	ORF	similar to Salmonella typhimurium PduA protein	hypothetical protein - RAST_Product: Propanediol utilization polyhedral body protein PduA	Propanediol utilization polyhedral body protein PduA		"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1152	1181720	1182421	702	+	1181720	1182421	702	ORF	similar to Salmonella typhimurium PduB protein	hypothetical protein	Propanediol utilization polyhedral body protein PduB		Amino acid transport and metabolism	ATG	 
lmo1153	1182440	1184104	1665	+	1182440	1184104	1665	ORF	highly similar to propanediol dehydratase, alpha subunit	hypothetical protein - RAST_Product: Propanediol dehydratase large subunit (EC 4.2.1.28)	Propanediol dehydratase large subunit (EC 4.2.1.28)		Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo1154	1184142	1184801	660	+	1184142	1184801	660	ORF	similar to diol dehydrase (diol dehydratase) gamma subunit	hypothetical protein - RAST_Product: Propanediol dehydratase medium subunit (EC 4.2.1.28)	Propanediol dehydratase medium subunit (EC 4.2.1.28)		Not in COGs	ATG	 
lmo1155	1184818	1185330	513	+	1184818	1185330	513	ORF	similar to diol dehydrase (diol dehydratase) gamma subunit (pddC)	hypothetical protein - RAST_Product: Propanediol dehydratase small subunit (EC 4.2.1.28)	Propanediol dehydratase small subunit (EC 4.2.1.28)		Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo1156	1185375	1187195	1821	+	1185375	1187195	1821	ORF	similar to diol dehydratase-reactivating factor large subunit	hypothetical protein - RAST_Product: Propanediol dehydratase reactivation factor large subunit	Propanediol dehydratase reactivation factor large subunit		Not in COGs	ATG	 
lmo1157	1187192	1187539	348	+	1187192	1187539	348	ORF	similar to diol dehydratase-reactivating factor small chain	hypothetical protein - RAST_Product: Propanediol dehydratase reactivation factor small subunit	Propanediol dehydratase reactivation factor small subunit		Not in COGs	ATG	 
lmo1158	1187552	1187989	438	+	1187552	1187989	438	ORF	similar to Salmonella enterica PduK protein	hypothetical protein - RAST_Product: Propanediol utilization polyhedral body protein PduK	Propanediol utilization polyhedral body protein PduK		"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1159	1188014	1188289	276	+	1188014	1188289	276	ORF	similar to carboxysome structural protein	hypothetical protein - RAST_Product: Propanediol utilization polyhedral body protein PduJ	Propanediol utilization polyhedral body protein PduJ		"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1160	1188293	1188928	636	+	1188293	1188928	636	ORF	similar to Salmonella enterica PduL protein	hypothetical protein - RAST_Product: Propanediol utilization protein PduL	Propanediol utilization protein PduL		Secondary metabolites biosynthesis, transport and catabolism	GTG	 
lmo1161	1188949	1189788	840	+	1188949	1189788	840	ORF	similar to ethanolamine utilization protein EutJ	hypothetical protein - RAST_Product: Ethanolamine utilization protein EutJ	Ethanolamine utilization protein EutJ		Amino acid transport and metabolism	ATG	 
lmo1162	1189785	1190264	480	+	1189785	1190264	480	ORF	lmo1162	hypothetical protein - RAST_Product: Propanediol utilization protein PduM	Propanediol utilization protein PduM		Not in COGs	ATG	 
lmo1163	1190269	1190532	264	+	1190269	1190532	264	ORF	similar to carbon dioxide concentrating mechanism protein	hypothetical protein - RAST_Product: Propanediol utilization polyhedral body protein PduN	Propanediol utilization polyhedral body protein PduN		"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1164	1190547	1191542	996	+	1190547	1191542	996	ORF		ATP:cob(I)alamin adenosyltransferase protein PduO	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)		"General function prediction only; Function unknown;"	GTG	 
lmo1165	1191549	1192958	1410	+	1191549	1192958	1410	ORF	similar to ethanolamine utilization protein EutE	hypothetical protein - RAST_Product: CoA-acylating propionaldehyde dehydrogenase	CoA-acylating propionaldehyde dehydrogenase		Energy production and conversion	ATG	 
lmo1166	1192974	1194092	1119	+	1192974	1194092	1119	ORF	similar to NADPH-dependent butanol dehydrogenase	hypothetical protein - RAST_Product: Putative iron-containing NADPH-dependent propanol dehydrogenase	Putative iron-containing NADPH-dependent propanol dehydrogenase		Energy production and conversion	ATG	 
lmo1167	1194120	1194824	705	+	1194120	1194824	705	ORF	similar to glycerol uptake facilitator protein	hypothetical protein - RAST_Product: Glycerol uptake facilitator protein @ Propanediol diffusion facilitator	Glycerol uptake facilitator protein @ Propanediol diffusion facilitator		Carbohydrate transport and metabolism	ATG	 
lmo1168	1194890	1196083	1194	+	1194890	1196083	1194	ORF	similar to acetate kinase	hypothetical protein - RAST_Product: Propionate kinase, propanediol utilization (EC 2.7.2.1)	Propionate kinase, propanediol utilization (EC 2.7.2.1)		Energy production and conversion	ATG	 
lmo1169	1196097	1197182	1086	+	1196097	1197182	1086	ORF	"similar to Salmonella typhimurium CobD protein and to histidinol-phosphate aminotransferase; cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase"	threonine-phosphate decarboxylase	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	Operon_185	Amino acid transport and metabolism	GTG	 
lmo1170	1197172	1198047	876	+	1197172	1198047	876	ORF	similar to Salmonella enterica PduX protein	hypothetical protein	Threonine kinase in B12 biosynthesis	Operon_185	Secondary metabolites biosynthesis, transport and catabolism	GTG	 
lmo1171	1198637	1199776	1140	+	1198637	1199776	1140	ORF	similar to NADPH-dependent butanol dehydrogenase	hypothetical protein - RAST_Product: Alcohol dehydrogenase (EC 1.1.1.1)	Alcohol dehydrogenase (EC 1.1.1.1)		Energy production and conversion	ATG	 
lmo1172	1200051	1200632	582	+	1200051	1200632	582	ORF	similar to similar to two-component response regulator	hypothetical protein	Ethanolamine two-component response regulator	Operon_186	Signal transduction mechanisms	GTG	 
lmo1173	1200625	1202082	1458	+	1200625	1202082	1458	ORF	similar to two-component sensor histidine kinase	hypothetical protein - RAST_Product: Ethanolamine sensory transduction histidine kinase	Ethanolamine sensory transduction histidine kinase	Operon_186	Signal transduction mechanisms	ATG	 
lmo1174	1202171	1203592	1422	+	1202171	1203592	1422	ORF	similar to ethanolamine utilization protein EutA (putative chaperonin)	reactivating factor for ethanolamine ammonia lyase	Ethanolamine utilization protein EutA	Operon_187	Amino acid transport and metabolism	TTG	 
lmo1175	1203634	1204998	1365	+	1203634	1204998	1365	ORF	similar to ethanolamine ammonia-lyase, heavy chain	hypothetical protein - RAST_Product: Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)	Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)	Operon_187	Amino acid transport and metabolism	ATG	 
lmo1176	1205018	1205899	882	+	1205018	1205899	882	ORF	"similar to ethanolamine ammonia-lyase, light chain; catalyzes the formation of acetaldehyde from ethanolamine"	ethanolamine ammonia-lyase small subunit	Ethanolamine ammonia-lyase light chain (EC 4.3.1.7)	Operon_187	Amino acid transport and metabolism	ATG	 
lmo1177	1205922	1206575	654	+	1205922	1206575	654	ORF	similar to putative carboxysome structural protein (eutL)	hypothetical protein - RAST_Product: Ethanolamine utilization polyhedral-body-like protein EutL	Ethanolamine utilization polyhedral-body-like protein EutL	Operon_187	Amino acid transport and metabolism	ATG	 
lmo1178	1206590	1207111	522	+	1206590	1207111	522	ORF	similar to putative carboxysome structural protein	hypothetical protein - RAST_Product: Ethanolamine utilization polyhedral-body-like protein EutM	Ethanolamine utilization polyhedral-body-like protein EutM	Operon_187	"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1179	1207111	1208571	1461	+	1207111	1208571	1461	ORF	similar to acetaldehyde dehydrogenase / alcohol dehydrogenase	hypothetical protein - RAST_Product: Acetaldehyde dehydrogenase, ethanolamine utilization cluster	Acetaldehyde dehydrogenase, ethanolamine utilization cluster	Operon_187	Energy production and conversion	GTG	 
lmo1180	1208603	1208887	285	+	1208603	1208887	285	ORF	similar to putative carboxysome structural protein	hypothetical protein - RAST_Product: Ethanolamine utilization protein similar to PduA/PduJ	Ethanolamine utilization protein similar to PduA/PduJ	Operon_187	"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1181	1209053	1209808	756	+	1209053	1209808	756	ORF	similar to cobalamin adenosyl transferase	hypothetical protein - RAST_Product: ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17), ethanolamine utilization	ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17), ethanolamine utilization	Operon_187	Amino acid transport and metabolism	TTG	 
lmo1182	1209821	1210462	642	+	1209821	1210462	642	ORF	similar to Salmonella enterica PduL protein	hypothetical protein - RAST_Product: Ethanolamine utilization protein similar to PduL	Ethanolamine utilization protein similar to PduL	Operon_187	Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo1183	1210459	1211031	573	+	1210459	1211031	573	ORF	lmo1183	hypothetical protein	Protein clustered with ethanolamine utilization	Operon_187	Not in COGs	ATG	 
lmo1184	1211046	1211315	270	+	1211046	1211315	270	ORF	similar to carbon dioxide concentrating mechanism protein	hypothetical protein - RAST_Product: Ethanolamine utilization polyhedral-body-like protein EutN	Ethanolamine utilization polyhedral-body-like protein EutN	Operon_187	"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1185	1211308	1211853	546	+	1211308	1211853	546	ORF	similar to Salmonella enterica PduT protein	hypothetical protein	Ethanolamine utilization protein similar to PduT	Operon_187	"Secondary metabolites biosynthesis, transport and catabolism; Energy production and conversion;"	ATG	 
lmo1186	1211869	1212990	1122	+	1211869	1212990	1122	ORF	similar to ethanolamine utilization protein EutH - Escherichia coli	hypothetical protein - RAST_Product: Ethanolamine permease	Ethanolamine permease	Operon_187	Amino acid transport and metabolism	TTG	 
lmo1187	1212983	1213426	444	+	1212983	1213426	444	ORF	similar to ethanolamine utilization protein EutQ	hypothetical protein - RAST_Product: Ethanolamine utilization protein EutQ	Ethanolamine utilization protein EutQ	Operon_187	Amino acid transport and metabolism	ATG	 
lmo1188	1213636	1215087	1452	+	1213636	1215087	1452	ORF	lmo1188	hypothetical protein - RAST_Product: Putative major teichoic acid biosynthesis protein C	Putative major teichoic acid biosynthesis protein C		Not in COGs	ATG	 
lmo1189	1215128	1215679	552	-	1215128	1215679	552	ORF	similar to transcriptional regulator	hypothetical protein - RAST_Product: transcriptional regulator, AraC family	transcriptional regulator, AraC family		Transcription	TTG	 
lmo1190	1215993	1216487	495	+	1215993	1216487	495	ORF	lmo1190	hypothetical protein - RAST_Product: Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole	Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole		Not in COGs	TTG	 
lmo1191	1216820	1218178	1359	+	1216820	1218178	1359	ORF	"similar to cobyrinic acid a,c-diamide synthase; responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid"	cobyrinic acid a,c-diamide synthase	Cobyrinic acid A,C-diamide synthase		Coenzyme transport and metabolism	ATG	 
lmo1192	1218175	1219122	948	+	1218175	1219122	948	ORF	"similar to cobalamine synthesis protein CbiB; CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group"	cobalamin biosynthesis protein	Adenosylcobinamide-phosphate synthase		Coenzyme transport and metabolism	ATG	 
lmo1193	1219135	1219767	633	+	1219135	1219767	633	ORF	"similar to precorrin isomerase; catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin"	cobalt-precorrin-8X methylmutase	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)		Coenzyme transport and metabolism	ATG	 
lmo1194	1219783	1220904	1122	+	1219783	1220904	1122	ORF	"similar to cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A"	cobalt-precorrin-6A synthase	Cobalt-precorrin-6 synthase, anaerobic		Coenzyme transport and metabolism	ATG	 
lmo1195	1220901	1221497	597	+	1220901	1221497	597	ORF	"similar to precorrin methylase; catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a"	cobalt-precorrin-6Y C(5)-methyltransferase	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)		Coenzyme transport and metabolism	ATG	 
lmo1196	1221487	1222056	570	+	1221487	1222056	570	ORF	"similar to precorrin decarbocylase; catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating"	cobalt-precorrin-6Y C(15)-methyltransferase	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)		Coenzyme transport and metabolism	ATG	 
lmo1197	1222062	1222811	750	+	1222062	1222811	750	ORF	similar to precorrin-3 methylase	hypothetical protein - RAST_Product: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)		Coenzyme transport and metabolism	ATG	 
lmo1198	1222798	1223829	1032	+	1222798	1223829	1032	ORF	"similar to cobalamin biosynthesis protein G CbiG; catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3"	cobalamin biosynthesis protein CbiG	Cobalamin biosynthesis protein CbiG		Coenzyme transport and metabolism	ATG	 
lmo1199	1223826	1224551	726	+	1223826	1224551	726	ORF	"similar to precorrin methylase; catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine"	precorrin-3B C17-methyltransferase	Cobalt-precorrin-3b C17-methyltransferase		Coenzyme transport and metabolism	ATG	 
lmo1200	1224548	1225300	753	+	1224548	1225300	753	ORF	similar to cobalamin biosynthesis J protein CbiJ	hypothetical protein - RAST_Product: Cobalt-precorrin-6x reductase (EC 1.3.1.54)	Cobalt-precorrin-6x reductase (EC 1.3.1.54)		Coenzyme transport and metabolism	ATG	 
lmo1201	1225300	1226781	1482	+	1225300	1226781	1482	ORF	similar uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase	hypothetical protein - RAST_Product: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)		Coenzyme transport and metabolism	ATG	 
lmo1202	1226778	1227563	786	+	1226778	1227563	786	ORF	similar to anaerobic Cobalt Chelatase In Cobalamin Biosynthesis	hypothetical protein - RAST_Product: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)		Coenzyme transport and metabolism	ATG	 
lmo1203	1227556	1228266	711	+	1227556	1228266	711	ORF	"similar to S-adenosyl-methionine: precorrin-2 methyltransferase; catalyzes the formation of precorrin-3A from precorrin-2"	cobalt-precorrin-2 C(20)-methyltransferase	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)		Coenzyme transport and metabolism	GTG	 
lmo1204	1228347	1228997	651	+	1228347	1228997	651	ORF	"similar to cobalamin biosynthesis protein M; catalyzes the ATP-dependent transport of cobalt"	cobalt transport protein CbiM	Substrate-specific component CbiM of cobalt ECF transporter		Inorganic ion transport and metabolism	ATG	 
lmo1205	1228994	1229290	297	+	1228994	1229290	297	ORF	"similar to putative cobalt transport protein CbiN; periplasmic cobalt binding component of the cobalt transport system"	cobalt transport protein CbiN	Additional substrate-specific component CbiN of cobalt ECF transporter		Inorganic ion transport and metabolism	ATG	 
lmo1206	1229277	1229954	678	+	1229277	1229954	678	ORF	similar to cobalt transport protein Q	hypothetical protein - RAST_Product: Transmembrane component CbiQ of energizing module of cobalt ECF transporter	Transmembrane component CbiQ of energizing module of cobalt ECF transporter		Inorganic ion transport and metabolism	ATG	 
lmo1207	1229967	1230773	807	+	1229967	1230773	807	ORF	similar to cobalt transport ATP-binding protein CbiO	hypothetical protein - RAST_Product: ATPase component CbiO of energizing module of cobalt ECF transporter	ATPase component CbiO of energizing module of cobalt ECF transporter		Inorganic ion transport and metabolism	TTG	 
lmo1208	1230773	1232308	1536	+	1230773	1232308	1536	ORF	"similar to cobyric acid synthase CbiP; catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation"	cobyric acid synthase	Cobyric acid synthase		Coenzyme transport and metabolism	ATG	 
lmo1209	1232272	1232838	567	+	1232272	1232838	567	ORF		hypothetical protein - RAST_Product: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)		Function unknown	ATG	 
lmo1210	1232884	1233351	468	-	1232884	1233351	468	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_188	Function unknown	ATG	 
lmo1211	1233366	1233815	450	-	1233366	1233815	450	ORF		hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_188	Function unknown	TTG	 
lmo1212	1233904	1234434	531	+	1233904	1234434	531	ORF		hypothetical protein - RAST_Product: FIG00774383: hypothetical protein	FIG00774383: hypothetical protein		Nucleotide transport and metabolism	ATG	 
lmo1213	1234465	1234776	312	+	1234465	1234776	312	ORF		hypothetical protein - RAST_Product: Transcriptional regulator, PadR family	Transcriptional regulator, PadR family		Transcription	ATG	 
lmo1214	1234779	1235330	552	+	1234779	1235330	552	ORF	lmo1214	hypothetical protein - RAST_Product: FIG00774857: hypothetical protein	FIG00774857: hypothetical protein		Not in COGs	ATG	 
lmo1215	1235670	1236539	870	+	1235670	1236539	870	ORF	similar to N-acetylmuramoyl-L-alanine amidase (autolysin)	hypothetical protein	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)		"Cell motility; Intracellular trafficking and secretion;"	CTG	 
lmo1216	1236836	1237822	987	+	1236836	1237822	987	ORF	similar to N-acetylmuramoyl-L-alanine amidase (autolysin)	hypothetical protein - RAST_Product: N-acetylmuramoyl-L-alanine amidase, family 4	N-acetylmuramoyl-L-alanine amidase, family 4		"Cell motility; Intracellular trafficking and secretion;"	GTG	 
lmo1217	1237934	1239013	1080	+	1237934	1239013	1080	ORF	similar to endo-1,4-beta-glucanase and to aminopeptidase	hypothetical protein - RAST_Product: Peptidase, M42 family	Peptidase, M42 family	Operon_189	Carbohydrate transport and metabolism	ATG	 
lmo1218	1239039	1239797	759	+	1239039	1239797	759	ORF	similar to rRNA methylase	hypothetical protein - RAST_Product: FIG011178: rRNA methylase	FIG011178: rRNA methylase	Operon_189	Translation	ATG	 
lmo1219	1239842	1240201	360	-	1239842	1240201	360	ORF	lmo1219	hypothetical protein - RAST_Product: FIG00774663: hypothetical protein	FIG00774663: hypothetical protein		Not in COGs	ATG	 
lmo1220	1240358	1240681	324	+	1240358	1240681	324	ORF		hypothetical protein - RAST_Product: Transcriptional regulator, HxlR family	Transcriptional regulator, HxlR family		Transcription	ATG	 
lmo1221	1241048	1242100	1053	+	1241048	1242100	1053	ORF	"catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily"	phenylalanyl-tRNA synthetase subunit alpha	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	Operon_190	Translation	ATG	 
lmo1222	1242100	1244508	2409	+	1242100	1244508	2409	ORF	"catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily"	phenylalanyl-tRNA synthetase subunit beta	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Operon_190	"Translation; General function prediction only;"	ATG	 
lmo1223	1244669	1245370	702	+	1244669	1245370	702	ORF	similar to ABC transporter, ATP-binding proteins	hypothetical protein - RAST_Product: ABC transporter ATP-binding protein YvcR	ABC transporter ATP-binding protein YvcR	Operon_191	Defense/virulence mechanisms	ATG	 
lmo1224	1245384	1248794	3411	+	1245384	1248794	3411	ORF	similar to different proteins	hypothetical protein - RAST_Product: ABC transporter permease protein	ABC transporter permease protein	Operon_191	Defense/virulence mechanisms	GTG	 
lmo1225	1248892	1249344	453	+	1248892	1249344	453	ORF	similar to transcriptional regulator (MarR family).	hypothetical protein - RAST_Product: transcriptional regulator, MarR family	transcriptional regulator, MarR family	Operon_192	Transcription	TTG	 
lmo1226	1249360	1252560	3201	+	1249360	1252560	3201	ORF	similar to transporter, (to B. subtilis YdgH protein)	hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_192	General function prediction only	ATG	 
lmo1227	1252667	1253341	675	+	1252667	1253341	675	ORF	"similar to uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine"	uracil-DNA glycosylase	Uracil-DNA glycosylase, family 1		Replication, recombination and repair	ATG	 
lmo1228	1253379	1254305	927	-	1253379	1254305	927	ORF	"similar to B. subtilis ribonuclease HIII; An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids"	ribonuclease HIII	Ribonuclease HIII (EC 3.1.26.4)		Replication, recombination and repair	ATC	 
lmo1229	1254459	1254722	264	+	1254459	1254722	264	ORF	similar to B. subtilis YshA protein	hypothetical protein - RAST_Product: Z-ring-associated protein	Z-ring-associated protein	Operon_193	Function unknown	GTG	 
lmo1230	1254722	1255264	543	+	1254722	1255264	543	ORF	similar to B. subtilis YshB protein	hypothetical protein - RAST_Product: Possible colicin V production protein	Possible colicin V production protein	Operon_193	General function prediction only	ATG	 
lmo1231	1255357	1257069	1713	+	1255357	1257069	1713	ORF	similar to DNA polymerase beta, to B. subtilis YshC protein	hypothetical protein - RAST_Product: DNA polymerase X family	DNA polymerase X family	Operon_193	"Replication, recombination and repair; Amino acid transport and metabolism; General function prediction only;"	ATG	 
lmo1232	1257092	1259449	2358	+	1257092	1259449	2358	ORF	"similar to MutS protein (MutS2); MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange"	recombination and DNA strand exchange inhibitor protein	Recombination inhibitory protein MutS2	Operon_193	Replication, recombination and repair	ATG	 
lmo1233	1259530	1259841	312	+	1259530	1259841	312	ORF		thioredoxin	Thioredoxin	Operon_193	"Posttranslational modification, protein turnover, chaperones; Energy production and conversion;"	ATG	 
lmo1234	1259917	1261728	1812	+	1259917	1261728	1812	ORF	"highly similar to excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision"	excinuclease ABC subunit C	Excinuclease ABC subunit C	Operon_193	Replication, recombination and repair	ATG	 
lmo1235	1261917	1263131	1215	+	1261917	1263131	1215	ORF	"similar to aspartokinase II alpha subunit; catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation"	aspartate kinase	Aspartokinase (EC 2.7.2.4)		Amino acid transport and metabolism	TTG	 
lmo1236	1263187	1263681	495	-	1263187	1263681	495	ORF	similar to B. subtilis YslB protein	hypothetical protein	FIG00774424: hypothetical protein		Not in COGs	TTG	 
lmo1237	1263829	1264629	801	+	1263829	1264629	801	ORF	"similar to glutamate racemase; converts L-glutamate to D-glutamate, a component of peptidoglycan"	glutamate racemase	Glutamate racemase (EC 5.1.1.3)	Operon_194	Cell wall/membrane biogenesis	GTG	 
lmo1238	1264642	1265388	747	+	1264642	1265388	747	ORF	"similar to ribonuclease PH; RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs"	ribonuclease PH	Ribonuclease PH (EC 2.7.7.56)	Operon_194	Translation	ATG	 
lmo1239	1265392	1266003	612	+	1265392	1266003	612	ORF	"Nucleoside-triphosphatase; hydrolyzes non-standard nucleotides such as xanthine and inosine"	nucleoside-triphosphatase	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	Operon_194	Nucleotide transport and metabolism	ATG	 
lmo1240	1266040	1266564	525	+	1266040	1266564	525	ORF	conserved hypothetical protein, similar to B. subtilis YsnB protein	hypothetical protein - RAST_Product: FIG009886: phosphoesterase	FIG009886: phosphoesterase	Operon_194	General function prediction only	ATG	 
lmo1241	1267115	1268473	1359	+	1267115	1268473	1359	ORF	lmo1241	hypothetical protein - RAST_Product: putative exported protein	putative exported protein		Function unknown	ATG	 
lmo1242	1268515	1269108	594	-	1268515	1269108	594	ORF	similar to B. subtilis YdeI protein	hypothetical protein - RAST_Product: DUF1801 domain-containing protein	DUF1801 domain-containing protein	Operon_195	Function unknown	ATG	 
lmo1243	1269262	1269669	408	-	1269262	1269669	408	ORF	lmo1243	"hypothetical protein - RAST_Product: PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"	"PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"	Operon_195	Function unknown	ATG	 
lmo1244	1269834	1270433	600	+	1269834	1270433	600	ORF	weakly similar to phosphoglycerate mutase 1	hypothetical protein - RAST_Product: Hypothetical, related to broad specificity phosphatases COG0406	Hypothetical, related to broad specificity phosphatases COG0406		Carbohydrate transport and metabolism	ATG	 
lmo1245	1270465	1270725	261	-	1270465	1270725	261	ORF	lmo1245	hypothetical protein - RAST_Product: FIG00774287: hypothetical protein	FIG00774287: hypothetical protein		Not in COGs	ATG	 
lmo1246	1270849	1272261	1413	+	1270849	1272261	1413	ORF	similar to ATP-dependent RNA helicase (DEAD motif)	hypothetical protein - RAST_Product: ATP-dependent RNA helicase YxiN	ATP-dependent RNA helicase YxiN	Operon_196	"Replication, recombination and repair; Transcription; Translation;"	ATG	 
lmo1247	1272286	1272549	264	+	1272286	1272549	264	ORF	lmo1247	hypothetical protein - RAST_Product: FIG00774866: hypothetical protein	FIG00774866: hypothetical protein	Operon_196	Not in COGs	ATG	 
lmo1248	1272717	1273193	477	+	1272717	1273193	477	ORF	weakly similar to 8-oxo-dGTPase (mutT)	hypothetical protein - RAST_Product: MutT/nudix family protein	MutT/nudix family protein		"Replication, recombination and repair; General function prediction only;"	ATG	 
lmo1249	1273231	1273476	246	-	1273231	1273476	246	ORF	lmo1249	hypothetical protein - RAST_Product: FIG00774262: hypothetical protein	FIG00774262: hypothetical protein		Not in COGs	ATG	 
lmo1250	1273473	1274678	1206	-	1273473	1274678	1206	ORF	similar to antibiotic resistance protein	hypothetical protein - RAST_Product: transporter	transporter		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo1251	1274883	1275542	660	+	1274883	1275542	660	ORF	similar to regulator of the Fnr CRP family (including PrfA)	hypothetical protein - RAST_Product: transcriptional regulator, Crp/Fnr family	transcriptional regulator, Crp/Fnr family		Signal transduction mechanisms	ATG	 
lmo1252	1275845	1276693	849	-	1275845	1276693	849	ORF	similar to B. subtilis YxkD protein	hypothetical protein - RAST_Product: membrane protein	membrane protein		Function unknown	ATG	 
lmo1253	1277312	1278025	714	+	1277312	1278025	714	ORF	similar to transcription regulator GntR family	hypothetical protein - RAST_Product: Trehalose operon transcriptional repressor	Trehalose operon transcriptional repressor		Transcription	TTG	 
lmo1254	1278056	1279702	1647	-	1278056	1279702	1647	ORF	similar to alpha,alpha-phosphotrehalase	hypothetical protein - RAST_Product: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)	Trehalose-6-phosphate hydrolase (EC 3.2.1.93)	Operon_197	Carbohydrate transport and metabolism	ATG	 
lmo1255	1279721	1281205	1485	-	1279721	1281205	1485	ORF	similar to PTS system trehalose specific enzyme IIBC	hypothetical protein - RAST_Product: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)	PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)	Operon_197	Carbohydrate transport and metabolism	ATG	 
lmo1256	1281321	1281773	453	+	1281321	1281773	453	ORF	lmo1256	hypothetical protein - RAST_Product: FIG00774111: hypothetical protein	FIG00774111: hypothetical protein		"Replication, recombination and repair; General function prediction only;"	ATG	 
lmo1257	1281820	1282284	465	-	1281820	1282284	465	ORF	lmo1257	hypothetical protein - RAST_Product: FIG00774071: hypothetical protein	FIG00774071: hypothetical protein		Not in COGs	ATG	 
lmo1258	1282473	1283393	921	+	1282473	1283393	921	ORF	lmo1258	"hypothetical protein - RAST_Product: Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative"	"Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative"		Lipid transport and metabolism	ATG	 
lmo1259	1283413	1284660	1248	-	1283413	1284660	1248	ORF	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway	gamma-glutamyl phosphate reductase	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	Operon_198	Amino acid transport and metabolism	ATG	 
lmo1260	1284644	1285474	831	-	1284644	1285474	831	ORF	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis	gamma-glutamyl kinase	Glutamate 5-kinase (EC 2.7.2.11)	Operon_198	Amino acid transport and metabolism	ATG	 
lmo1261	1285610	1286749	1140	-	1285610	1286749	1140	ORF	lmo1261	hypothetical protein - RAST_Product: membrane protein	membrane protein		Function unknown	TTG	 
lmo1262	1286830	1287225	396	-	1286830	1287225	396	ORF	similar to transcriptional regulator (phage-related)	hypothetical protein - RAST_Product: Ans operon transcriptional repressor	Ans operon transcriptional repressor		Transcription	ATG	 
lmo1263	1287376	1287591	216	+	1287376	1287591	216	ORF	similar to transcriptional regulator	hypothetical protein - RAST_Product: transcriptional regulator, putative	transcriptional regulator, putative		Transcription	ATG	 
lmo1264	1287710	1288243	534	+	1287710	1288243	534	ORF	lmo1264	hypothetical protein - RAST_Product: FIG00774540: hypothetical protein	FIG00774540: hypothetical protein		General function prediction only	ATG	 
lmo1265	1288261	1288926	666	+	1288261	1288926	666	ORF	weakly similar to oligopeptide ABC transporter AppA (binding protein)	hypothetical protein - RAST_Product: FIG00774764: hypothetical protein	FIG00774764: hypothetical protein		Not in COGs	ATG	 
lmo1266	1289188	1290126	939	+	1289188	1290126	939	ORF	lmo1266	hypothetical protein - RAST_Product: FIG00774727: hypothetical protein	FIG00774727: hypothetical protein		General function prediction only	ATG	 
lmo1267	1290241	1291524	1284	+	1290241	1291524	1284	ORF	"Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer"	trigger factor	Cell division trigger factor (EC 5.2.1.8)	Operon_199	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1268	1291710	1292969	1260	+	1291710	1292969	1260	ORF	binds and unfolds substrates as part of the ClpXP protease	ATP-dependent protease ATP-binding subunit ClpX	ATP-dependent Clp protease ATP-binding subunit ClpX	Operon_199	Posttranslational modification, protein turnover, chaperones	TTG	 
lmo1269	1293088	1293654	567	+	1293088	1293654	567	ORF	similar to type-I signal peptidase	hypothetical protein - RAST_Product: Signal peptidase I (EC 3.4.21.89)	Signal peptidase I (EC 3.4.21.89)	Operon_200	Intracellular trafficking and secretion	ATG	 
lmo1270	1293689	1294258	570	+	1293689	1294258	570	ORF	similar to signal peptidase I	hypothetical protein - RAST_Product: Signal peptidase I (EC 3.4.21.89)	Signal peptidase I (EC 3.4.21.89)	Operon_200	Intracellular trafficking and secretion	ATG	 
lmo1271	1294360	1294902	543	+	1294360	1294902	543	ORF	similar to signal peptidase I	hypothetical protein - RAST_Product: Signal peptidase I (EC 3.4.21.89)	Signal peptidase I (EC 3.4.21.89)	Operon_200	Intracellular trafficking and secretion	TTG	 
lmo1272	1294912	1295775	864	+	1294912	1295775	864	ORF	"conserved hypothetical protein similar to B. subtilis YlqF protein; essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc)"	ribosomal biogenesis GTPase	50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)	Operon_200	General function prediction only	ATG	 
lmo1273	1295772	1296557	786	+	1295772	1296557	786	ORF	"similar to ribonuclease H rnh; RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids"	ribonuclease HII	Ribonuclease HII (EC 3.1.26.4)	Operon_200	Replication, recombination and repair	ATG	 
lmo1274	1296691	1297551	861	+	1296691	1297551	861	ORF	similar to polypeptide deformylase, similar to B. subtilis Smf protein	hypothetical protein - RAST_Product: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake		"Replication, recombination and repair; Intracellular trafficking and secretion;"	ATG	 
lmo1275	1297823	1299901	2079	+	1297823	1299901	2079	ORF	"highly similar to DNA topoisomerase I TopA; catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity"	DNA topoisomerase I	DNA topoisomerase I (EC 5.99.1.2)	Operon_201	Replication, recombination and repair	ATG	 
lmo1276	1299964	1301268	1305	+	1299964	1301268	1305	ORF	"similar glucose inhibited division protein A; TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine"	tRNA (uracil-5-)-methyltransferase Gid	tRNA:m(5)U-54 MTase gid	Operon_201	Translation	ATG	 
lmo1277	1301551	1302453	903	+	1301551	1302453	903	ORF	similar to integrase/recombinase	hypothetical protein - RAST_Product: Site-specific tyrosine recombinase	Site-specific tyrosine recombinase	Operon_202	Replication, recombination and repair	ATG	 
lmo1278	1302474	1303013	540	+	1302474	1303013	540	ORF	"highly similar to beta-type subunit of the 20S proteasome; heat shock protein involved in degradation of misfolded proteins"	ATP-dependent protease peptidase subunit	ATP-dependent protease HslV (EC 3.4.25.-)	Operon_202	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1279	1303027	1304436	1410	+	1303027	1304436	1410	ORF	"highly similar to ATP-dependent Clp protease-like proteins; heat shock protein involved in degradation of misfolded proteins"	ATP-dependent protease ATP-binding subunit HslU	ATP-dependent hsl protease ATP-binding subunit HslU	Operon_202	Posttranslational modification, protein turnover, chaperones	TTG	 
lmo1280	1304457	1305236	780	+	1304457	1305236	780	ORF	"highly similar to B. subtilis CodY protein; CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor"	transcriptional repressor CodY	GTP-sensing transcriptional pleiotropic repressor codY	Operon_202	Transcription	ATG	 
lmo1281	1305390	1305758	369	+	1305390	1305758	369	ORF	similar to B. subtilis YneP protein	hypothetical protein	4-hydroxybenzoyl-CoA thioesterase family active site	Operon_203	General function prediction only	ATG	 
lmo1282	1305781	1306092	312	+	1305781	1306092	312	ORF	similar to B. subtilis YneQ protein	hypothetical protein - RAST_Product: FIG00774818: hypothetical protein	FIG00774818: hypothetical protein	Operon_203	Not in COGs	ATG	 
lmo1283	1306095	1306967	873	+	1306095	1306967	873	ORF	similar to Lactococcus lactis LacX protein	hypothetical protein - RAST_Product: lacX protein, putative	lacX protein, putative	Operon_203	Carbohydrate transport and metabolism	ATG	 
lmo1284	1307009	1307605	597	-	1307009	1307605	597	ORF	conserved hypothetical protein, similar to B. subtilis YneS protein	hypothetical protein - RAST_Product: Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY	Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY		Function unknown	ATG	 
lmo1285	1307763	1308170	408	+	1307763	1308170	408	ORF	conserved hypothetical protein, similar to B. subtilis YneT protein	hypothetical protein - RAST_Product: Succinyl-CoA synthetase, alpha subunit-related enzymes	Succinyl-CoA synthetase, alpha subunit-related enzymes	Operon_204	General function prediction only	ATG	 
lmo1286	1308351	1310318	1968	+	1308351	1310318	1968	ORF	"highly similar to DNA gyrase-like protein (subunit B); decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling"	DNA topoisomerase IV subunit B	Topoisomerase IV subunit B (EC 5.99.1.-)	Operon_204	Replication, recombination and repair	ATG	 
lmo1287	1310315	1312774	2460	+	1310315	1312774	2460	ORF	"highly similar to DNA gyrase-like protein (subunit A); decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling"	DNA topoisomerase IV subunit A	Topoisomerase IV subunit A (EC 5.99.1.-)	Operon_204	Replication, recombination and repair	TTG	 
lmo1288	1312857	1313324	468	+	1312857	1313324	468	ORF	"S-ribosylhomocysteine lyase; catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2"	S-ribosylhomocysteinase	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS		Signal transduction mechanisms	ATG	 
lmo1289	1313654	1315435	1782	+	1313654	1315435	1782	ORF	similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein	Internalin-like protein (LPXTG motif) Lmo1289 homolog		Function unknown	ATG	 
lmo1290	1315767	1317563	1797	+	1315767	1317563	1797	ORF	similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo1290 homolog	Internalin-like protein (LPXTG motif) Lmo1290 homolog		Not in COGs	ATG	 
lmo1291	1317596	1319464	1869	-	1317596	1319464	1869	ORF	similar to acyltransferase (to B. subtilis YrhL protein)	hypothetical protein - RAST_Product: Acyltransferase	Acyltransferase		Lipid transport and metabolism	TTG	 
lmo1292	1319677	1320375	699	+	1319677	1320375	699	ORF	similar to glycerophosphodiester phosphodiesterase	hypothetical protein - RAST_Product: Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)		Energy production and conversion	TTG	 
lmo1293	1320608	1322284	1677	+	1320608	1322284	1677	ORF	similar to glycerol 3 phosphate dehydrogenase	hypothetical protein - RAST_Product: Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)		Energy production and conversion	ATG	 
lmo1294	1322410	1323327	918	+	1322410	1323327	918	ORF	"similar to tRNA isopentenylpyrophosphate transferase; IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity"	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8)		Translation	TTG	 
lmo1295	1323450	1323683	234	+	1323450	1323683	234	ORF	similar to host factor-1 protein	hypothetical protein - RAST_Product: RNA-binding protein Hfq	RNA-binding protein Hfq		"Transcription; Translation;"	ATG	 
lmo1296	1323794	1325017	1224	+	1323794	1325017	1224	ORF	conserved hypothetical protein similar to B. subtilis YnbA protein	hypothetical protein - RAST_Product: GTP-binding protein HflX	GTP-binding protein HflX	Operon_205	General function prediction only	GTG	 
lmo1297	1325010	1326236	1227	+	1325010	1326236	1227	ORF	similar to aluminum resistance protein and to B. subtilis YnbB protein (hypothetical)	hypothetical protein - RAST_Product: Aluminum resistance protein	Aluminum resistance protein	Operon_205	Inorganic ion transport and metabolism	ATG	 
lmo1298	1326440	1326808	369	+	1326440	1326808	369	ORF	similar to glutamine synthetase repressor	hypothetical protein	transcriptional repressor GlnR		Transcription	GTG	 
lmo1299	1326879	1328213	1335	+	1326879	1328213	1335	ORF	highly similar to glutamine synthetases	hypothetical protein - RAST_Product: Glutamine synthetase type I (EC 6.3.1.2)	Glutamine synthetase type I (EC 6.3.1.2)		Amino acid transport and metabolism	ATG	 
lmo1300	1328357	1329652	1296	+	1328357	1329652	1296	ORF	similar to arsenic efflux pump protein	hypothetical protein	Arsenic efflux pump protein		Inorganic ion transport and metabolism	ATG	 
lmo1301	1329696	1330217	522	-	1329696	1330217	522	ORF		hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_206	Translation	ATG	 
lmo1302	1330247	1330861	615	-	1330247	1330861	615	ORF	"highly similar to SOS response regulator lexA, transcription repressor protein; Represses a number of genes involved in the response to DNA damage"	LexA repressor	SOS-response repressor and protease LexA (EC 3.4.21.88)	Operon_206	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1303	1331018	1331347	330	+	1331018	1331347	330	ORF	similar to B. subtilis YneA protein	cell division suppressor protein YneA	ABC transport protein, sugar-binding component yneA		Cell wall/membrane biogenesis	ATG	 
lmo1304	1331439	1331666	228	+	1331439	1331666	228	ORF	similar to B. subtilis YnzC protein	hypothetical protein - RAST_Product: FIG00774411: hypothetical protein	FIG00774411: hypothetical protein		Function unknown	ATG	 
lmo1305	1331813	1333807	1995	+	1331813	1333807	1995	ORF	highly similar to transketolase	hypothetical protein - RAST_Product: Transketolase (EC 2.2.1.1)	Transketolase (EC 2.2.1.1)		Carbohydrate transport and metabolism	TTG	 
lmo1306	1334028	1334267	240	+	1334028	1334267	240	ORF	highly similar to B. subtilis YneF protein	hypothetical protein - RAST_Product: FIG00774758: hypothetical protein	FIG00774758: hypothetical protein		Function unknown	ATG	 
lmo1307	1334318	1335160	843	-	1334318	1335160	843	ORF	lmo1307	hypothetical protein - RAST_Product: FIG00774999: hypothetical protein	FIG00774999: hypothetical protein	Operon_207	Not in COGs	GTG	 
lmo1308	1335179	1335910	732	-	1335179	1335910	732	ORF	weakly similar to arginine N-methyltransferases	hypothetical protein - RAST_Product: Ubiquinone/menaquinone biosynthesis methyltransferase UBIE (EC 2.1.1.-)	Ubiquinone/menaquinone biosynthesis methyltransferase UBIE (EC 2.1.1.-)	Operon_207	"Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo1309	1335932	1336438	507	-	1335932	1336438	507	ORF	similar to E. coli YbdM protein	hypothetical protein - RAST_Product: Co-activator of prophage gene expression IbrB	Co-activator of prophage gene expression IbrB	Operon_207	Transcription	ATG	 
lmo1310	1336448	1337752	1305	-	1336448	1337752	1305	ORF	similar to E. coli YbdN protein	hypothetical protein - RAST_Product: Co-activator of prophage gene expression IbrA	Co-activator of prophage gene expression IbrA	Operon_207	General function prediction only	ATG	 
lmo1311	1337742	1338947	1206	-	1337742	1338947	1206	ORF	lmo1311	hypothetical protein	FIG00774327: hypothetical protein	Operon_207	"Transcription; Replication, recombination and repair;"	TTG	 
lmo1312	1338925	1339299	375	-	1338925	1339299	375	ORF	lmo1312	hypothetical protein - RAST_Product: FIG00774393: hypothetical protein	FIG00774393: hypothetical protein	Operon_207	Not in COGs	ATG	 
lmo1313	1339592	1340320	729	+	1339592	1340320	729	ORF	"highly similar to uridylate kinases; Catalyzes the phosphorylation of UMP to UDP"	uridylate kinase	Uridylate kinase (EC 2.7.4.-)	Operon_208	Nucleotide transport and metabolism	ATG	 
lmo1314	1340320	1340877	558	+	1340320	1340877	558	ORF	"highly similar to ribosome recycling factors; Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs"	ribosome recycling factor	Ribosome recycling factor	Operon_208	Translation	ATG	 
lmo1315	1341107	1341865	759	+	1341107	1341865	759	ORF	"similar to undecaprenyl diphosphate synthase; catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate"	undecaprenyl pyrophosphate synthase	Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)	Operon_209	Lipid transport and metabolism	ATG	 
lmo1316	1341879	1342667	789	+	1341879	1342667	789	ORF	similar to phosphatidate cytidylyltransferase (CDP-diglyceride synthase)	hypothetical protein - RAST_Product: Phosphatidate cytidylyltransferase (EC 2.7.7.41)	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	Operon_209	Lipid transport and metabolism	TTG	 
lmo1317	1342682	1343824	1143	+	1342682	1343824	1143	ORF	"similar to deoxyxylulose 5-phosphate reductoisomerase; catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate"	1-deoxy-D-xylulose 5-phosphate reductoisomerase	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	Operon_209	Lipid transport and metabolism	ATG	 
lmo1318	1343838	1345100	1263	+	1343838	1345100	1263	ORF	Putative zinc metalloprotease Lmo1318	hypothetical protein - RAST_Product: Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	Operon_209	Cell wall/membrane biogenesis	TTG	 
lmo1319	1345140	1346846	1707	+	1345140	1346846	1707	ORF	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)	prolyl-tRNA synthetase	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	Operon_209	Translation	ATG	 
lmo1320	1346951	1351285	4335	+	1346951	1351285	4335	ORF	"highly similar to DNA polymerase III (alpha subunit); catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity"	DNA polymerase III PolC	DNA polymerase III alpha subunit (EC 2.7.7.7)	Operon_209	Replication, recombination and repair	ATG	 
lmo1321	1351467	1351934	468	+	1351467	1351934	468	ORF	"conserved hypothetical protein, similar to B. subtilis YlxS protein; in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins"	hypothetical protein - RAST_Product: FIG000325: clustered with transcription termination protein NusA	FIG000325: clustered with transcription termination protein NusA	Operon_209	Function unknown	ATG	 
lmo1322	1351964	1353082	1119	+	1351964	1353082	1119	ORF	"highly similar to N utilization substance protein A (NusA protein); modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination"	transcription elongation factor NusA	Transcription termination protein NusA	Operon_209	Transcription	ATG	 
lmo1323	1353097	1353381	285	+	1353097	1353381	285	ORF	similar to B. subtilis YlxR protein	hypothetical protein - RAST_Product: COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination	Operon_209	Transcription	ATG	 
lmo1324	1353374	1353673	300	+	1353374	1353673	300	ORF	conserved hypothetical protein, similar to B. subtilis YlxQ protein	hypothetical protein - RAST_Product: ribosomal protein L7Ae family protein	ribosomal protein L7Ae family protein	Operon_209	Translation	ATG	 
lmo1325	1353696	1356035	2340	+	1353696	1356035	2340	ORF	"highly similar to translation initiation factor IF-2; Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex"	translation initiation factor IF-2	Translation initiation factor 2	Operon_209	Translation	ATG	 
lmo1326	1356032	1356310	279	+	1356032	1356310	279	ORF	conserved hypothetical protein similar to B. subtilis YlxP protein	hypothetical protein - RAST_Product: YlxP-like protein	YlxP-like protein	Operon_209	Function unknown	ATG	 
lmo1327	1356327	1356671	345	+	1356327	1356671	345	ORF	"highly similar to ribosome-binding factor A; associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock"	ribosome-binding factor A	Ribosome-binding factor A	Operon_209	Translation	TTG	 
lmo1328	1356769	1357683	915	+	1356769	1357683	915	ORF	"highly similar to tRNA pseudouridine 55 synthase; catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs"	tRNA pseudouridine synthase B	tRNA pseudouridine synthase B (EC 4.2.1.70)	Operon_210	Translation	ATG	 
lmo1329	1357753	1358697	945	+	1357753	1358697	945	ORF	highly similar to riboflavin kinase and FAD synthase	hypothetical protein - RAST_Product: Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2)	Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2)	Operon_210	Coenzyme transport and metabolism	ATG	 
lmo1330	1358834	1359103	270	+	1358834	1359103	270	ORF	"primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence"	30S ribosomal protein S15	SSU ribosomal protein S15p (S13e)		Translation	ATG	 
lmo1331	1359352	1361523	2172	+	1359352	1361523	2172	ORF		polynucleotide phosphorylase/polyadenylase	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)		Translation	ATG	 
lmo1332	1361564	1362604	1041	-	1361564	1362604	1041	ORF	Probable GTPase engC 2	hypothetical protein - RAST_Product: Probable GTPase related to EngC	Probable GTPase related to EngC		General function prediction only	TTG	 
lmo1333	1362765	1363244	480	-	1362765	1363244	480	ORF	similar to B. subtilis YqzC protein	hypothetical protein - RAST_Product: FIG00774161: hypothetical protein	FIG00774161: hypothetical protein	Operon_211	General function prediction only	GTG	 
lmo1334	1363272	1363628	357	-	1363272	1363628	357	ORF	similar to B. subtilis YqzD protein	hypothetical protein - RAST_Product: FIG00774344: hypothetical protein	FIG00774344: hypothetical protein	Operon_211	Not in COGs	ATG	 
lmo1335	1363826	1363975	150	+	1363826	1363975	150	ORF	"in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif"	50S ribosomal protein L33	LSU ribosomal protein L33p		Translation	ATG	 
lmo1336	1364031	1364570	540	+	1364031	1364570	540	ORF	similar to 5-formyltetrahydrofolate cyclo-ligase	hypothetical protein - RAST_Product: 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)		Coenzyme transport and metabolism	ATG	 
lmo1337	1364669	1366207	1539	+	1364669	1366207	1539	ORF	similar to B. subtilis yqgP	hypothetical protein - RAST_Product: Putative membrane peptidase, contains TPR repeat domain	Putative membrane peptidase, contains TPR repeat domain	Operon_212	General function prediction only	TTG	 
lmo1338	1366220	1366432	213	+	1366220	1366432	213	ORF	similar to B. subtilis yqgQ	hypothetical protein - RAST_Product: FIG00774150: hypothetical protein	FIG00774150: hypothetical protein	Operon_212	Function unknown	GTG	 
lmo1339	1366457	1367425	969	+	1366457	1367425	969	ORF	similar to glucose kinase	hypothetical protein - RAST_Product: Glucokinase (EC 2.7.1.2)	Glucokinase (EC 2.7.1.2)	Operon_212	"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo1340	1367559	1368650	1092	+	1367559	1368650	1092	ORF	similar to B. subtilis YqgU protein	hypothetical protein - RAST_Product: lipoprotein	lipoprotein	Operon_212	Not in COGs	ATG	 
lmo1341	1368668	1368985	318	-	1368668	1368985	318	ORF	weakly similar to B. subtilis comG operon protein 7 (comGG)	hypothetical protein - RAST_Product: Late competence protein ComGG, FIG007920	Late competence protein ComGG, FIG007920		Not in COGs	ATG	 
lmo1342	1368982	1369449	468	-	1368982	1369449	468	ORF	similar to B. subtilis comG operon protein 6	hypothetical protein - RAST_Product: Late competence protein ComGF, access of DNA to ComEA, FIG012620	Late competence protein ComGF, access of DNA to ComEA, FIG012620		Intracellular trafficking and secretion	GTG	 
lmo1343	1369412	1369696	285	-	1369412	1369696	285	ORF	similar to comG operon protein 5 (comGE)	hypothetical protein	Late competence protein ComGE, FIG015564		"Cell motility; Intracellular trafficking and secretion;"	TTG	 
lmo1344	1369683	1370111	429	-	1369683	1370111	429	ORF	similar to comG operon protein 4 (comGD)	hypothetical protein - RAST_Product: Late competence protein ComGD, access of DNA to ComEA, FIG012777	Late competence protein ComGD, access of DNA to ComEA, FIG012777		"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo1345	1370108	1370431	324	-	1370108	1370431	324	ORF	similar to B. subtilis comG operon protein 3	hypothetical protein - RAST_Product: Late competence protein ComGC, access of DNA to ComEA, FIG007487	Late competence protein ComGC, access of DNA to ComEA, FIG007487		Intracellular trafficking and secretion	ATG	 
lmo1346	1370445	1371476	1032	-	1370445	1371476	1032	ORF	similar to B. subtilis comG operon protein 2	hypothetical protein - RAST_Product: Late competence protein ComGB, access of DNA to ComEA	Late competence protein ComGB, access of DNA to ComEA		"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo1347	1371454	1372476	1023	-	1371454	1372476	1023	ORF	similar to B. subtilis comG operon protein 1	hypothetical protein - RAST_Product: Late competence protein ComGA, access of DNA to ComEA	Late competence protein ComGA, access of DNA to ComEA		"Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo1348	1373015	1374103	1089	+	1373015	1374103	1089	ORF	"similar to aminomethyltransferase; catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein"	glycine cleavage system aminomethyltransferase T	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	Operon_213	Amino acid transport and metabolism	ATG	 
lmo1349	1374119	1375465	1347	+	1374119	1375465	1347	ORF	"similar to glycine dehydrogenase (decarboxylating) subunit 1; acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein"	glycine dehydrogenase subunit 1	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	Operon_213	Amino acid transport and metabolism	ATG	 
lmo1350	1375462	1376928	1467	+	1375462	1376928	1467	ORF	"similar to glycine dehydrogenase (decarboxylating) subunit 2; acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein"	glycine dehydrogenase subunit 2	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	Operon_213	Amino acid transport and metabolism	ATG	 
lmo1351	1376968	1377348	381	-	1376968	1377348	381	ORF	lmo1351	hypothetical protein - RAST_Product: Rhodanese-like domain protein	Rhodanese-like domain protein	Operon_214	Inorganic ion transport and metabolism	GTG	 
lmo1352	1377410	1377682	273	-	1377410	1377682	273	ORF	lmo1352	hypothetical protein - RAST_Product: FIG00774167: hypothetical protein	FIG00774167: hypothetical protein	Operon_214	Not in COGs	TTG	 
lmo1353	1377695	1378660	966	-	1377695	1378660	966	ORF	similar to B. subtilis YqhQ protein	hypothetical protein - RAST_Product: FIG00672904: hypothetical protein	FIG00672904: hypothetical protein	Operon_214	General function prediction only	TTG	 
lmo1354	1378840	1379901	1062	+	1378840	1379901	1062	ORF	similar to aminopeptidase P	hypothetical protein - RAST_Product: Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)	Operon_215	Amino acid transport and metabolism	ATG	 
lmo1355	1380004	1380561	558	+	1380004	1380561	558	ORF	"highly similar to elongation factor P (EF-P); Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA"	elongation factor P	Translation elongation factor P	Operon_215	Translation	ATG	 
lmo1356	1380720	1381187	468	+	1380720	1381187	468	ORF	similar to acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit)	hypothetical protein - RAST_Product: Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	Operon_216	Lipid transport and metabolism	ATG	 
lmo1357	1381201	1382565	1365	+	1381201	1382565	1365	ORF	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism	acetyl-CoA carboxylase biotin carboxylase subunit	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	Operon_216	Lipid transport and metabolism	ATG	 
lmo1358	1382569	1382976	408	+	1382569	1382976	408	ORF	similar to B. subtilis YqhY protein	hypothetical protein - RAST_Product: Alkaline shock protein	Alkaline shock protein	Operon_216	Function unknown	ATG	 
lmo1359	1383007	1383393	387	+	1383007	1383393	387	ORF	"similar to transcription termination protein (NusB); Regulates rRNA biosynthesis by transcriptional antitermination"	transcription antitermination protein NusB	Transcription termination protein NusB	Operon_216	Transcription	ATG	 
lmo1360	1383489	1384343	855	+	1383489	1384343	855	ORF	"highly similar to methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase; catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate"	bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	Operon_216	Coenzyme transport and metabolism	ATG	 
lmo1361	1384362	1385714	1353	+	1384362	1385714	1353	ORF	"similar to exodeoxyribonuclease VII (large subunit); bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides"	exodeoxyribonuclease VII large subunit	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	Operon_216	Replication, recombination and repair	ATG	 
lmo1362	1385704	1385931	228	+	1385704	1385931	228	ORF	"similar to exodeoxyribonuclease small subunit; catalyzes the bidirectional exonucleolytic cleavage of DNA"	exodeoxyribonuclease VII small subunit	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	Operon_216	Replication, recombination and repair	GTG	 
lmo1363	1385934	1386815	882	+	1385934	1386815	882	ORF	similar to geranyltranstransferase	hypothetical protein - RAST_Product: Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10)	Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10)	Operon_216	Coenzyme transport and metabolism	TTG	 
lmo1364	1387014	1387214	201	+	1387014	1387214	201	ORF	similar to cold shock protein	hypothetical protein - RAST_Product: cold-shock protein	cold-shock protein		Transcription	ATG	 
lmo1365	1387381	1389210	1830	+	1387381	1389210	1830	ORF	"similar to D-1-deoxyxylulose 5-phosphate synthase; catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate"	1-deoxy-D-xylulose-5-phosphate synthase	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	Operon_217	"Coenzyme transport and metabolism; Lipid transport and metabolism;"	GTG	 
lmo1366	1389207	1390031	825	+	1389207	1390031	825	ORF		hypothetical protein - RAST_Product: RNA binding methyltransferase FtsJ like	RNA binding methyltransferase FtsJ like	Operon_217	Translation	ATG	 
lmo1367	1390222	1390671	450	+	1390222	1390671	450	ORF	"similar to arginine repressor; regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes"	arginine repressor	Arginine pathway regulatory protein ArgR, repressor of arg regulon	Operon_218	Transcription	ATG	 
lmo1368	1390694	1392385	1692	+	1390694	1392385	1692	ORF		DNA repair and genetic recombination	DNA repair protein RecN	Operon_218	Replication, recombination and repair	TTG	 
lmo1369	1392514	1393380	867	+	1392514	1393380	867	ORF	similar to phosphotransbutyrylase	hypothetical protein - RAST_Product: Phosphate butyryltransferase (EC 2.3.1.19)	Phosphate butyryltransferase (EC 2.3.1.19)	Operon_219	Energy production and conversion	ATG	 
lmo1370	1393517	1394584	1068	+	1393517	1394584	1068	ORF	"similar to branched-chain fatty-acid kinase; catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate"	butyrate kinase	Butyrate kinase (EC 2.7.2.7)	Operon_219	Energy production and conversion	ATG	 
lmo1371	1394599	1396026	1428	+	1394599	1396026	1428	ORF	"similar to branched-chain alpha-keto acid dehydrogenase E3 subunit; E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide"	dihydrolipoamide dehydrogenase	Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)	Operon_219	Energy production and conversion	GTG	 
lmo1372	1396051	1397046	996	+	1396051	1397046	996	ORF	similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit)	hypothetical protein - RAST_Product: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	Operon_219	Energy production and conversion	ATG	 
lmo1373	1397063	1398046	984	+	1397063	1398046	984	ORF	similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit)	hypothetical protein - RAST_Product: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	Operon_219	Energy production and conversion	ATG	 
lmo1374	1398077	1399327	1251	+	1398077	1399327	1251	ORF	similar to branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase)	hypothetical protein - RAST_Product: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	Operon_219	Energy production and conversion	GTG	 
lmo1375	1399699	1400796	1098	+	1399699	1400796	1098	ORF	similar to aminotripeptidase	hypothetical protein - RAST_Product: Peptidase T (EC 3.4.11.4)	Peptidase T (EC 3.4.11.4)		Amino acid transport and metabolism	ATG	 
lmo1376	1400941	1402359	1419	+	1400941	1402359	1419	ORF	"similar to 6-phosphogluconate dehydrogenase; catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate"	6-phosphogluconate dehydrogenase	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)		Carbohydrate transport and metabolism	ATG	 
lmo1377	1402550	1403230	681	+	1402550	1403230	681	ORF		two-component response regulator	DNA-binding heavy metal response regulator	Operon_220	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1378	1403227	1404678	1452	+	1403227	1404678	1452	ORF		two-component sensor histidine kinase	Two-component system histidine kinase	Operon_220	Signal transduction mechanisms	ATG	 
lmo1379	1404714	1405541	828	-	1404714	1405541	828	ORF	"similar to B. subtilis SpoIIIJ protein; involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site"	OxaA-like protein precursor	Inner membrane protein translocase component YidC, OxaA protein	Operon_221	Intracellular trafficking and secretion	TTG	 
lmo1380	1405578	1405859	282	-	1405578	1405859	282	ORF	lmo1380	hypothetical protein		Operon_221	Not in COGs	ATG	 
lmo1381	1405945	1406226	282	-	1405945	1406226	282	ORF	"lmo1381; catalyzes the hydrolysis of acylphosphate"	acylphosphatase	Predicted nucleoside phosphatase	Operon_221	Energy production and conversion	ATG	 
lmo1382	1406366	1406713	348	+	1406366	1406713	348	ORF	lmo1382	hypothetical protein - RAST_Product: FIG011684: hypothetical protein	FIG011684: hypothetical protein	Operon_222	Function unknown	ATG	 
lmo1383	1406742	1407818	1077	+	1406742	1407818	1077	ORF	catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate	isopentenyl pyrophosphate isomerase	Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)	Operon_222	Energy production and conversion	ATG	 
lmo1384	1407859	1408818	960	-	1407859	1408818	960	ORF		hypothetical protein - RAST_Product: Rhodanese domain protein UPF0176, Firmicutes subgroup	Rhodanese domain protein UPF0176, Firmicutes subgroup		General function prediction only	ATG	 
lmo1385	1409070	1409996	927	+	1409070	1409996	927	ORF		hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_223	Function unknown	GTG	 
lmo1386	1410148	1412421	2274	+	1410148	1412421	2274	ORF	similar to DNA translocase	hypothetical protein - RAST_Product: Cell division protein FtsK	Cell division protein FtsK	Operon_223	Cell cycle control, mitosis and meiosis	ATG	 
lmo1387	1412455	1413294	840	-	1412455	1413294	840	ORF	"similar to pyrroline-5-carboxylate reductase; catalyzes the formation of L-proline from pyrroline-5-carboxylate"	pyrroline-5-carboxylate reductase	Pyrroline-5-carboxylate reductase (EC 1.5.1.2), ProG-like		Amino acid transport and metabolism	ATG	 
lmo1388	1413646	1414719	1074	+	1413646	1414719	1074	ORF		CD4+ T cell-stimulating antigen, lipoprotein	Unspecified monosaccharide ABC transport system, substrate-binding component / CD4+ T cell-stimulating antigen, lipoprotein		General function prediction only	GTG	 
lmo1389	1415152	1416693	1542	+	1415152	1416693	1542	ORF	similar to sugar ABC transporter, ATP-binding protein	hypothetical protein	Unspecified monosaccharide ABC transport system, ATP-binding protein	Operon_224	General function prediction only	GTG	 
lmo1390	1416686	1417738	1053	+	1416686	1417738	1053	ORF	similar to ABC transporter (permease proteins)	hypothetical protein - RAST_Product: Unspecified monosaccharide ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Unspecified monosaccharide ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Operon_224	General function prediction only	ATG	 
lmo1391	1417735	1418685	951	+	1417735	1418685	951	ORF	similar to sugar ABC transporter, permease protein	hypothetical protein - RAST_Product: Unspecified monosaccharide ABC transport system, permease component 2	Unspecified monosaccharide ABC transport system, permease component 2	Operon_224	General function prediction only	ATG	 
lmo1392	1418803	1420095	1293	+	1418803	1420095	1293	ORF	similar to putative proteases	hypothetical protein - RAST_Product: FIG001621: Zinc protease	FIG001621: Zinc protease	Operon_225	General function prediction only	ATG	 
lmo1393	1420076	1421362	1287	+	1420076	1421362	1287	ORF	similar to putative protease	hypothetical protein - RAST_Product: FIG009210: peptidase, M16 family	FIG009210: peptidase, M16 family	Operon_225	General function prediction only	ATG	 
lmo1394	1421454	1422185	732	+	1421454	1422185	732	ORF	similar to 3-ketoacyl-acyl carrier protein reductase	hypothetical protein - RAST_Product: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	Operon_226	"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	TTG	 
lmo1395	1422236	1423165	930	+	1422236	1423165	930	ORF		hypothetical protein - RAST_Product: Transcriptional regulator in cluster with unspecified monosaccharide ABC transport system	Transcriptional regulator in cluster with unspecified monosaccharide ABC transport system	Operon_226	Function unknown	TTG	 
lmo1396	1423255	1423833	579	+	1423255	1423833	579	ORF	similar to phosphatidylglycerophosphate synthase	hypothetical protein - RAST_Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	Operon_226	Lipid transport and metabolism	ATG	 
lmo1397	1423902	1425146	1245	+	1423902	1425146	1245	ORF	similar to competence-damage inducible protein CinA	competence damage-inducible protein A	Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type S	Operon_226	General function prediction only	ATG	 
lmo1398	1425419	1426465	1047	+	1425419	1426465	1047	ORF	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs	recombinase A	RecA protein		Replication, recombination and repair	GTG	 
lmo1399	1426766	1428328	1563	+	1426766	1428328	1563	ORF	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP	phosphodiesterase	FIG002344: Hydrolase (HAD superfamily)		General function prediction only	ATG	 
lmo1400	1428442	1428939	498	+	1428442	1428939	498	ORF	similar to N-acetyltransferase	hypothetical protein - RAST_Product: phosphinothricin N-acetyltransferase	phosphinothricin N-acetyltransferase	Operon_227	Cell wall/membrane biogenesis	TTG	 
lmo1401	1428945	1429748	804	+	1428945	1429748	804	ORF		hypothetical protein - RAST_Product: FIG006542: Phosphoesterase	FIG006542: Phosphoesterase	Operon_227	Function unknown	ATG	 
lmo1402	1429765	1430127	363	+	1429765	1430127	363	ORF	similar to B. subtilis YmcA protein	hypothetical protein - RAST_Product: YMCA protein	YMCA protein	Operon_227	Function unknown	TTG	 
lmo1403	1430237	1432819	2583	+	1430237	1432819	2583	ORF	This protein performs the mismatch recognition step during the DNA repair process	DNA mismatch repair protein MutS	DNA mismatch repair protein MutS	Operon_228	Replication, recombination and repair	ATG	 
lmo1404	1432839	1434644	1806	+	1432839	1434644	1806	ORF	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	DNA mismatch repair protein	DNA mismatch repair protein MutL	Operon_228	Replication, recombination and repair	ATG	 
lmo1405	1434661	1435209	549	+	1434661	1435209	549	ORF	similar to putative anti-terminator regulatory protein	hypothetical protein - RAST_Product: Glycerol uptake operon antiterminator regulatory protein	Glycerol uptake operon antiterminator regulatory protein	Operon_228	Transcription	TTG	 
lmo1406	1435635	1437866	2232	+	1435635	1437866	2232	ORF		pyruvate formate-lyase	Pyruvate formate-lyase (EC 2.3.1.54)	Operon_229	Energy production and conversion	ATG	 
lmo1407	1437943	1438689	747	+	1437943	1438689	747	ORF		pyruvate-formate lyase activating enzyme	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	Operon_229	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1408	1438724	1439254	531	-	1438724	1439254	531	ORF		hypothetical protein - RAST_Product: Transcriptional regulator, PadR family	Transcriptional regulator, PadR family		Transcription	ATG	 
lmo1409	1439421	1440614	1194	+	1439421	1440614	1194	ORF	similar to multidrug-efflux transporter	hypothetical protein - RAST_Product: multidrug resistance protein, putative	multidrug resistance protein, putative		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo1410	1440748	1441296	549	+	1440748	1441296	549	ORF	lmo1410	hypothetical protein - RAST_Product: FIG00774516: hypothetical protein	FIG00774516: hypothetical protein	Operon_230	Not in COGs	ATG	 
lmo1411	1441313	1441540	228	+	1441313	1441540	228	ORF	lmo1411	hypothetical protein	Transcriptional regulator, Cro/CI family	Operon_230	Transcription	ATG	 
lmo1412	1441581	1442114	534	+	1441581	1442114	534	ORF		modulates DNA topology	DNA topology modulation protein FlaR	Operon_230	Nucleotide transport and metabolism	ATG	 
lmo1413	1442368	1443687	1320	-	1442368	1443687	1320	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo1413 homolog		Not in COGs	ATG	 
lmo1414	1443873	1445042	1170	-	1443873	1445042	1170	ORF	similar to Acetyl-CoA:acetyltransferase	hypothetical protein - RAST_Product: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)		Lipid transport and metabolism	ATG	 
lmo1415	1445192	1446358	1167	+	1445192	1446358	1167	ORF	similar to hydroxy-3-methylglutaryl coenzyme A synthase	hypothetical protein - RAST_Product: Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10)	Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10)		Lipid transport and metabolism	ATG	 
lmo1416	1446383	1446982	600	-	1446383	1446982	600	ORF	lmo1416	hypothetical protein - RAST_Product: FIG00774487: hypothetical protein	FIG00774487: hypothetical protein	Operon_231	Defense/virulence mechanisms	ATG	 
lmo1417	1447052	1448296	1245	-	1447052	1448296	1245	ORF	highly similar to B. subtilis YxiO protein	hypothetical protein - RAST_Product: membrane protein, putative	membrane protein, putative	Operon_231	General function prediction only	TTG	 
lmo1418	1448315	1449583	1269	-	1448315	1449583	1269	ORF	weakly similar to pyrophosphatase	hypothetical protein - RAST_Product: Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9)	Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9)	Operon_231	General function prediction only	ATG	 
lmo1419	1449647	1450684	1038	-	1449647	1450684	1038	ORF		hypothetical protein - RAST_Product: FIG00774844: hypothetical protein	FIG00774844: hypothetical protein	Operon_231	General function prediction only	TTG	 
lmo1420	1450701	1451597	897	-	1450701	1451597	897	ORF	"weakly similar to UDP-N-acetylglucosaminyl-3-enolpyruvate reductase; catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis"	UDP-N-acetylenolpyruvoylglucosamine reductase	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	Operon_231	Cell wall/membrane biogenesis	ATG	 
lmo1421	1451813	1452799	987	+	1451813	1452799	987	ORF	similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32)	Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32)	Operon_232	Defense/virulence mechanisms	ATG	 
lmo1422	1452796	1454310	1515	+	1452796	1454310	1515	ORF	similar to glycine betaine/carnitine/choline ABC transporter (membrane protein)	hypothetical protein - RAST_Product: Glycine betaine ABC transport system, permease protein OpuAB / Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC	Glycine betaine ABC transport system, permease protein OpuAB / Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC	Operon_232	Defense/virulence mechanisms	ATG	 
lmo1423	1454347	1455177	831	-	1454347	1455177	831	ORF	lmo1423	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_233	Not in COGs	ATG	 
lmo1424	1455316	1456662	1347	-	1455316	1456662	1347	ORF	similar to manganese transport proteins NRAMP	manganese transport protein MntH	Manganese transport protein MntH	Operon_233	Inorganic ion transport and metabolism	ATG	 
lmo1425	1456775	1457446	672	-	1456775	1457446	672	ORF	similar to betaine/carnitine/choline ABC transporter (membrane p)	hypothetical protein - RAST_Product: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Operon_234	Amino acid transport and metabolism	ATG	 
lmo1426	1457461	1458387	927	-	1457461	1458387	927	ORF	similar to glycine betaine/carnitine/choline ABC transporter (osmoprotectant-binding protein)	hypothetical protein - RAST_Product: Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Operon_234	Amino acid transport and metabolism	ATG	 
lmo1427	1458389	1459045	657	-	1458389	1459045	657	ORF	similar to glycine betaine/carnitine/choline ABC transporter (membrane protein)	hypothetical protein - RAST_Product: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Operon_234	Amino acid transport and metabolism	ATG	 
lmo1428	1459049	1460242	1194	-	1459049	1460242	1194	ORF	similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	Operon_234	Amino acid transport and metabolism	GTG	 
lmo1429	1460534	1461094	561	-	1460534	1461094	561	ORF		hypothetical protein - RAST_Product: Substrate-specific component ThiT of thiamin ECF transporter	Substrate-specific component ThiT of thiamin ECF transporter		Function unknown	ATG	 
lmo1430	1461343	1461726	384	-	1461343	1461726	384	ORF		hypothetical protein - RAST_Product: FIG00774289: hypothetical protein	FIG00774289: hypothetical protein		Function unknown	ATG	 
lmo1431	1461866	1463467	1602	+	1461866	1463467	1602	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter ATP-binding protein uup	ABC transporter ATP-binding protein uup		General function prediction only	ATG	 
lmo1432	1463506	1464156	651	-	1463506	1464156	651	ORF	lmo1432	hypothetical protein - RAST_Product: FIG00774303: hypothetical protein	FIG00774303: hypothetical protein	Operon_235	Not in COGs	ATG	 
lmo1433	1464209	1465549	1341	-	1464209	1465549	1341	ORF	similar to glutathione reductase	hypothetical protein - RAST_Product: Glutathione reductase (EC 1.8.1.7)	Glutathione reductase (EC 1.8.1.7)	Operon_235	Energy production and conversion	GTG	 
lmo1434	1465638	1467305	1668	-	1465638	1467305	1668	ORF		hypothetical protein - RAST_Product: Ribonuclease J2 (endoribonuclease in RNA processing)	Ribonuclease J2 (endoribonuclease in RNA processing)	Operon_236	General function prediction only	TTG	 
lmo1435	1467325	1468206	882	-	1467325	1468206	882	ORF	"similar to dihydrodipicolinate synthase; catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis"	dihydrodipicolinate synthase	Dihydrodipicolinate synthase (EC 4.2.1.52)	Operon_236	"Amino acid transport and metabolism; Cell wall/membrane biogenesis;"	ATG	 
lmo1436	1468221	1469432	1212	-	1468221	1469432	1212	ORF	"similar to aspartokinase I (alpha and beta subunits); catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive"	aspartate kinase I	Aspartokinase (EC 2.7.2.4)	Operon_236	Amino acid transport and metabolism	ATG	 
lmo1437	1469444	1470487	1044	-	1469444	1470487	1044	ORF	similar to aspartate-semialdehyde dehydrogenase	hypothetical protein - RAST_Product: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	Operon_236	Amino acid transport and metabolism	ATG	 
lmo1438	1470685	1472850	2166	-	1470685	1472850	2166	ORF	similar to penicillin-binding protein	hypothetical protein - RAST_Product: Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) / Transpeptidase, Penicillin binding protein transpeptidase domain	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) / Transpeptidase, Penicillin binding protein transpeptidase domain		Cell wall/membrane biogenesis	GTG	 
lmo1439	1472980	1473588	609	-	1472980	1473588	609	ORF		superoxide dismutase	Manganese superoxide dismutase (EC 1.15.1.1)		Inorganic ion transport and metabolism	ATG	 
lmo1440	1473889	1474689	801	+	1473889	1474689	801	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein		Not in COGs	ATG	 
lmo1441	1474802	1475908	1107	+	1474802	1475908	1107	ORF	"similar to putative peptidoglycan acetylation protein; catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis"	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	Operon_237	Lipid transport and metabolism	TTG	 
lmo1442	1475944	1476651	708	+	1475944	1476651	708	ORF	similar to transport proteins	hypothetical protein - RAST_Product: FIG00775383: hypothetical protein	FIG00775383: hypothetical protein	Operon_237	Amino acid transport and metabolism	TTG	 
lmo1443	1476642	1476968	327	+	1476642	1476968	327	ORF	lmo1443	hypothetical protein - RAST_Product: FIG00774780: hypothetical protein	FIG00774780: hypothetical protein	Operon_237	Function unknown	ATG	 
lmo1444	1477050	1477934	885	-	1477050	1477934	885	ORF	similar to protein secretion PrsA (post-translocation molecular chaperone)	hypothetical protein - RAST_Product: Foldase protein PrsA precursor (EC 5.2.1.8)	Foldase protein PrsA precursor (EC 5.2.1.8)		Posttranslational modification, protein turnover, chaperones	TTG	 
lmo1445	1478071	1478496	426	-	1478071	1478496	426	ORF		transcriptional regulator ZurR (ferric uptake regulation)	Zinc uptake regulation protein ZUR	Operon_238	Inorganic ion transport and metabolism	ATG	 
lmo1446	1478477	1479355	879	-	1478477	1479355	879	ORF		metal (zinc) transport protein (ABC transporter, permease protein)	Zinc ABC transporter, inner membrane permease protein ZnuB	Operon_238	Inorganic ion transport and metabolism	TTG	 
lmo1447	1479330	1480103	774	-	1479330	1480103	774	ORF		metal (zinc) transport protein(ABC transporter, ATP-binding protein)	Zinc ABC transporter, ATP-binding protein ZnuC	Operon_238	Inorganic ion transport and metabolism	ATG	 
lmo1448	1480246	1481172	927	-	1480246	1481172	927	ORF	"Probable manganese-dependent inorganic pyrophosphatase; catalyzes the hydrolysis of pyrophosphate to phosphate"	putative manganese-dependent inorganic pyrophosphatase	Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)	Operon_239	Energy production and conversion	ATG	 
lmo1449	1481188	1482081	894	-	1481188	1482081	894	ORF	"similar to endonuclease IV; Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues"	endonuclease IV	Endonuclease IV (EC 3.1.21.2)	Operon_239	Replication, recombination and repair	ATG	 
lmo1450	1482096	1483403	1308	-	1482096	1483403	1308	ORF	similar to ATP-dependent RNA helicase, DEAD-box family (deaD)	hypothetical protein - RAST_Product: ATP-dependent RNA helicase YqfR	ATP-dependent RNA helicase YqfR	Operon_239	"Replication, recombination and repair; Transcription; Translation;"	ATG	 
lmo1451	1483549	1484544	996	+	1483549	1484544	996	ORF	"similar to E. coli LytB protein; catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway"	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)		"Lipid transport and metabolism; Cell wall/membrane biogenesis;"	ATG	 
lmo1452	1484590	1485711	1122	-	1484590	1485711	1122	ORF		hypothetical protein - RAST_Product: UPF0135 protein Bsu YqfO @ Bsu YqfO NIF3/CutA domain	UPF0135 protein Bsu YqfO @ Bsu YqfO NIF3/CutA domain	Operon_240	Function unknown	ATG	 
lmo1453	1485708	1486412	705	-	1485708	1486412	705	ORF		hypothetical protein	Putative tRNA-m1A22 methylase	Operon_240	General function prediction only	ATG	 
lmo1454	1486480	1487604	1125	-	1486480	1487604	1125	ORF	"sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium"	RNA polymerase sigma factor RpoD	RNA polymerase sigma factor RpoD		Transcription	ATG	 
lmo1455	1487699	1489579	1881	-	1487699	1489579	1881	ORF		DNA primase	DNA primase (EC 2.7.7.-)	Operon_241	Replication, recombination and repair	ATG	 
lmo1456	1489599	1490039	441	-	1489599	1490039	441	ORF		hypothetical protein - RAST_Product: FIG00774729: hypothetical protein	FIG00774729: hypothetical protein	Operon_241	Function unknown	GTG	 
lmo1457	1490229	1491053	825	-	1490229	1491053	825	ORF		hypothetical protein - RAST_Product: ATP/GTP-binding protein, SA1392 homolog	ATP/GTP-binding protein, SA1392 homolog	Operon_241	Function unknown	ATG	 
lmo1458	1491087	1493153	2067	-	1491087	1493153	2067	ORF	"similar to glycyl-tRNA synthetase beta chain; glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA"	glycyl-tRNA synthetase subunit beta	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	Operon_241	Translation	ATG	 
lmo1459	1493146	1494036	891	-	1493146	1494036	891	ORF	"similar to glycyl-tRNA synthetase alpha chain; glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA"	glycyl-tRNA synthetase subunit alpha	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	Operon_241	Translation	ATG	 
lmo1460	1494317	1495084	768	-	1494317	1495084	768	ORF	"similar to B. subtilis RecO protein involved in DNA repair and homologous recombination; involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA"	DNA repair protein RecO	DNA recombination and repair protein RecO		Replication, recombination and repair	ATG	 
lmo1461	1495221	1495850	630	+	1495221	1495850	630	ORF	lmo1461	hypothetical protein	FIG00774553: hypothetical protein		Not in COGs	ATG	 
lmo1462	1495899	1496804	906	-	1495899	1496804	906	ORF	"similar to GTP binding proteins; Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome"	GTP-binding protein Era	GTP-binding protein Era	Operon_242	General function prediction only	ATG	 
lmo1463	1496801	1497196	396	-	1496801	1497196	396	ORF	similar to cytidine deaminase	hypothetical protein - RAST_Product: Cytidine deaminase (EC 3.5.4.5)	Cytidine deaminase (EC 3.5.4.5)	Operon_242	Nucleotide transport and metabolism	ATG	 
lmo1464	1497221	1497616	396	-	1497221	1497616	396	ORF	similar to diacylglycerol kinase	hypothetical protein	Diacylglycerol kinase (EC 2.7.1.107)	Operon_242	Cell wall/membrane biogenesis	ATG	 
lmo1465	1497594	1498079	486	-	1497594	1498079	486	ORF		putative metalloprotease	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	Operon_242	General function prediction only	ATG	 
lmo1466	1498096	1500252	2157	-	1498096	1500252	2157	ORF		hypothetical protein - RAST_Product: Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	Operon_242	General function prediction only	GTG	 
lmo1467	1500268	1501227	960	-	1500268	1501227	960	ORF	similar to phosphate starvation induced protein PhoH	hypothetical protein - RAST_Product: Phosphate starvation-inducible protein PhoH, predicted ATPase	Phosphate starvation-inducible protein PhoH, predicted ATPase	Operon_242	Signal transduction mechanisms	ATG	 
lmo1468	1501415	1501861	447	-	1501415	1501861	447	ORF		hypothetical protein - RAST_Product: Transamidase GatB domain protein	Transamidase GatB domain protein	Operon_243	Function unknown	TTG	 
lmo1469	1501881	1502054	174	-	1501881	1502054	174	ORF	"a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA"	30S ribosomal protein S21	SSU ribosomal protein S21p	Operon_243	Translation	ATG	 
lmo1470	1502252	1503019	768	-	1502252	1503019	768	ORF	"in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase"	16S ribosomal RNA methyltransferase RsmE	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	Operon_244	Function unknown	ATG	 
lmo1471	1503020	1503964	945	-	1503020	1503964	945	ORF	"similar to ribosomal protein L11 methyltransferase; methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype"	ribosomal protein L11 methyltransferase	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	Operon_244	Translation	ATG	 
lmo1472	1504037	1505170	1134	-	1504037	1505170	1134	ORF	"chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion"	chaperone protein DnaJ	Chaperone protein DnaJ	Operon_244	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1473	1505312	1507153	1842	-	1505312	1507153	1842	ORF	"heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria"	molecular chaperone DnaK	Chaperone protein DnaK	Operon_244	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1474	1507187	1507762	576	-	1507187	1507762	576	ORF	"with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor"	heat shock protein GrpE	Heat shock protein GrpE	Operon_244	Posttranslational modification, protein turnover, chaperones	GTG	 
lmo1475	1507804	1508841	1038	-	1507804	1508841	1038	ORF	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons	heat-inducible transcription repressor	Heat-inducible transcription repressor HrcA	Operon_244	Transcription	ATG	 
lmo1476	1508988	1510145	1158	-	1508988	1510145	1158	ORF	"highly similar to coproporphyrinogen III oxidase; catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III"	coproporphyrinogen III oxidase	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type		Coenzyme transport and metabolism	ATG	 
lmo1477	1510234	1511262	1029	-	1510234	1511262	1029	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: FIG01108282: hypothetical protein	FIG01108282: hypothetical protein		"Cell wall/membrane biogenesis; Carbohydrate transport and metabolism;"	ATG	 
lmo1478	1511375	1511812	438	+	1511375	1511812	438	ORF	similar to transcriptional regulator (MerR family)	hypothetical protein - RAST_Product: Transcriptional regulator, MerR family	Transcriptional regulator, MerR family		Transcription	ATG	 
lmo1479	1511858	1513684	1827	-	1511858	1513684	1827	ORF	"highly similar to GTP-binding protein LepA; binds to the ribosome on the universally-conserved alpha-sarcin loop"	GTP-binding protein LepA	Translation elongation factor LepA		Cell wall/membrane biogenesis	ATG	 
lmo1480	1513917	1514171	255	+	1513917	1514171	255	ORF	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase	30S ribosomal protein S20	SSU ribosomal protein S20p		Translation	ATG	 
lmo1481	1514257	1515288	1032	-	1514257	1515288	1032	ORF	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA	DNA polymerase III subunit delta	DNA polymerase III delta subunit (EC 2.7.7.7)		Replication, recombination and repair	ATG	 
lmo1482	1515356	1517578	2223	-	1515356	1517578	2223	ORF	similar to putative integral membrane protein ComEC specifically required for DNA uptake but not for binding	hypothetical protein - RAST_Product: Late competence protein ComEC, DNA transport	Late competence protein ComEC, DNA transport		General function prediction only	ATG	 
lmo1483	1517613	1518173	561	-	1517613	1518173	561	ORF	similar to B. subtilis ComEB protein	hypothetical protein	"dCMP deaminase (EC 3.5.4.12); Late competence protein ComEB"		Nucleotide transport and metabolism	GTG	 
lmo1484	1518245	1518847	603	-	1518245	1518847	603	ORF	similar to integral membrane protein ComEA	hypothetical protein - RAST_Product: Late competence protein ComEA, DNA receptor	Late competence protein ComEA, DNA receptor		Replication, recombination and repair	ATG	 
lmo1485	1518950	1519681	732	-	1518950	1519681	732	ORF		hypothetical protein - RAST_Product: FIG145533: Methyltransferase (EC 2.1.1.-)	FIG145533: Methyltransferase (EC 2.1.1.-)		"Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo1486	1519736	1520092	357	-	1519736	1520092	357	ORF	lmo1486	hypothetical protein - RAST_Product: Iojap protein	Iojap protein		Function unknown	TTG	 
lmo1487	1520097	1520672	576	-	1520097	1520672	576	ORF		hypothetical protein - RAST_Product: Hydrolase (HAD superfamily), YqeK	Hydrolase (HAD superfamily), YqeK	Operon_245	Coenzyme transport and metabolism	ATG	 
lmo1488	1520659	1521225	567	-	1520659	1521225	567	ORF	"transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria"	nicotinic acid mononucleotide adenylyltransferase	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	Operon_245	Coenzyme transport and metabolism	ATG	 
lmo1489	1521243	1521533	291	-	1521243	1521533	291	ORF		hypothetical protein - RAST_Product: FIG004454: RNA binding protein	FIG004454: RNA binding protein	Operon_245	Translation	ATG	 
lmo1490	1521533	1522354	822	-	1521533	1522354	822	ORF	similar to shikimate 5-dehydrogenase (AroD)	hypothetical protein - RAST_Product: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	Operon_245	Amino acid transport and metabolism	TTG	 
lmo1491	1522374	1523474	1101	-	1522374	1523474	1101	ORF	in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis	GTP-binding protein YqeH	GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit	Operon_245	General function prediction only	TTG	 
lmo1492	1523471	1523992	522	-	1523471	1523992	522	ORF		hypothetical protein - RAST_Product: FIG001553: Hydrolase, HAD subfamily IIIA	FIG001553: Hydrolase, HAD subfamily IIIA	Operon_245	General function prediction only	GTG	 
lmo1493	1524154	1525962	1809	+	1524154	1525962	1809	ORF	similar to oligopeptidase	hypothetical protein - RAST_Product: Oligoendopeptidase F	Oligoendopeptidase F		Amino acid transport and metabolism	ATG	 
lmo1494	1525997	1526698	702	-	1525997	1526698	702	ORF	similar to 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	hypothetical protein - RAST_Product: 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	5'-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	Operon_246	Nucleotide transport and metabolism	ATG	 
lmo1495	1526748	1527371	624	-	1526748	1527371	624	ORF		hypothetical protein - RAST_Product: conserved hypothetical protein	conserved hypothetical protein	Operon_246	Not in COGs	ATG	 
lmo1496	1527422	1527904	483	-	1527422	1527904	483	ORF	"similar to transcription elongation factor GreA; necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus"	transcription elongation factor GreA	Transcription elongation factor GreA	Operon_246	Transcription	TTG	 
lmo1497	1528098	1528727	630	-	1528098	1528727	630	ORF	"similar to Uridine kinase; functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor"	uridine kinase	Uridine kinase (EC 2.7.1.48) [C1]	Operon_247	Nucleotide transport and metabolism	ATG	 
lmo1498	1528724	1529377	654	-	1528724	1529377	654	ORF	similar to O-methyltransferase	hypothetical protein - RAST_Product: FIG011945: O-methyltransferase family protein	FIG011945: O-methyltransferase family protein	Operon_247	General function prediction only	GTG	 
lmo1499	1529454	1530524	1071	-	1529454	1530524	1071	ORF		hypothetical protein - RAST_Product: FIG004453: protein YceG like	FIG004453: protein YceG like	Operon_247	General function prediction only	ATG	 
lmo1500	1530727	1531353	627	+	1530727	1531353	627	ORF		hypothetical protein - RAST_Product: DedA family protein	DedA family protein		Function unknown	ATG	 
lmo1501	1531398	1531700	303	-	1531398	1531700	303	ORF		hypothetical protein - RAST_Product: Ortholog of S. aureus MRSA252 (BX571856) SAR1694	Ortholog of S. aureus MRSA252 (BX571856) SAR1694	Operon_248	Function unknown	ATG	 
lmo1502	1531716	1532132	417	-	1531716	1532132	417	ORF	"similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function"	Holliday junction resolvase-like protein	Putative Holliday junction resolvase (EC 3.1.-.-)	Operon_248	Replication, recombination and repair	ATG	 
lmo1503	1532129	1532401	273	-	1532129	1532401	273	ORF	lmo1503	hypothetical protein - RAST_Product: Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase	Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase	Operon_248	Function unknown	ATG	 
lmo1504	1532493	1535132	2640	-	1532493	1535132	2640	ORF	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA	alanyl-tRNA synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)		Translation	ATG	 
lmo1505	1535439	1536134	696	-	1535439	1536134	696	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: ABC transporter ATP-binding protein YvcR	ABC transporter ATP-binding protein YvcR		Defense/virulence mechanisms	ATG	 
lmo1506	1536143	1537648	1506	-	1536143	1537648	1506	ORF	similar to transporter	hypothetical protein	ABC transporter, permease protein		Defense/virulence mechanisms	ATG	 
lmo1507	1537815	1538501	687	+	1537815	1538501	687	ORF	similar to two-component response regulators	hypothetical protein - RAST_Product: DNA-binding response regulator, OmpR family	DNA-binding response regulator, OmpR family	Operon_249	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1508	1538498	1539937	1440	+	1538498	1539937	1440	ORF	similar to two-component sensor histidine kinase	hypothetical protein	Sensor protein basS/pmrB (EC 2.7.3.-)	Operon_249	Signal transduction mechanisms	ATG	 
lmo1509	1539979	1542375	2397	-	1539979	1542375	2397	ORF	similar to exodeoxyribonuclease V	hypothetical protein - RAST_Product: RecD-like DNA helicase YrrC	RecD-like DNA helicase YrrC	Operon_250	Replication, recombination and repair	ATG	 
lmo1510	1542403	1543041	639	-	1542403	1543041	639	ORF		hypothetical protein	Tetratricopeptide repeat (TPR) family protein	Operon_250	General function prediction only	ATG	 
lmo1511	1543082	1543822	741	-	1543082	1543822	741	ORF		hypothetical protein - RAST_Product: carboxymethylenebutenolidase-related protein	carboxymethylenebutenolidase-related protein	Operon_250	General function prediction only	ATG	 
lmo1512	1543940	1545055	1116	-	1543940	1545055	1116	ORF	"similar to putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs"	tRNA-specific 2-thiouridylase MnmA	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	Operon_250	Translation	TTG	 
lmo1513	1545074	1546222	1149	-	1545074	1546222	1149	ORF	similar to iron-sulfur cofactor synthesis protein	hypothetical protein - RAST_Product: Cysteine desulfurase (EC 2.8.1.7)	Cysteine desulfurase (EC 2.8.1.7)	Operon_250	Amino acid transport and metabolism	ATG	 
lmo1514	1546608	1547885	1278	-	1546608	1547885	1278	ORF		recombination factor protein RarA	Uncharacterized ATPase (AAA family) associated with cysteine desulfurase		Replication, recombination and repair	ATG	 
lmo1515	1548034	1548456	423	+	1548034	1548456	423	ORF		hypothetical protein - RAST_Product: Iron-sulfur cluster regulator IscR	Iron-sulfur cluster regulator IscR		Transcription	ATG	 
lmo1516	1548701	1549906	1206	+	1548701	1549906	1206	ORF	similar to ammonium transporter NrgA	hypothetical protein - RAST_Product: Ammonium transporter	Ammonium transporter	Operon_251	Inorganic ion transport and metabolism	ATG	 
lmo1517	1549920	1550285	366	+	1549920	1550285	366	ORF	similar to nitrogen regulatory PII protein	hypothetical protein - RAST_Product: Nitrogen regulatory protein P-II	Nitrogen regulatory protein P-II	Operon_251	Amino acid transport and metabolism	ATG	 
lmo1518	1550435	1550815	381	+	1550435	1550815	381	ORF	lmo1518	hypothetical protein - RAST_Product: FIG00774153: hypothetical protein	FIG00774153: hypothetical protein		Not in COGs	ATG	 
lmo1519	1550854	1552629	1776	-	1550854	1552629	1776	ORF	"catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes"	aspartyl-tRNA synthetase	Aspartyl-tRNA synthetase (EC 6.1.1.12)	Operon_252	Translation	ATG	 
lmo1520	1552632	1553909	1278	-	1552632	1553909	1278	ORF	"catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG"	histidyl-tRNA synthetase	Histidyl-tRNA synthetase (EC 6.1.1.21)	Operon_252	Translation	ATG	 
lmo1521	1554360	1555643	1284	+	1554360	1555643	1284	ORF	similar to N-acetylmuramoyl-L-alanine amidase	hypothetical protein - RAST_Product: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)		"Signal transduction mechanisms; Cell wall/membrane biogenesis;"	ATG	 
lmo1522	1555680	1556132	453	-	1555680	1556132	453	ORF	"hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine"	D-tyrosyl-tRNA(Tyr) deacylase	D-tyrosyl-tRNA(Tyr) deacylase	Operon_253	Translation	ATG	 
lmo1523	1556148	1558364	2217	-	1556148	1558364	2217	ORF	similar to (p)ppGpp synthetase	hypothetical protein - RAST_Product: GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	Operon_253	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1524	1558570	1559091	522	-	1558570	1559091	522	ORF	"similar to adenine phosphoribosyltransferase; catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis"	adenine phosphoribosyltransferase	Adenine phosphoribosyltransferase (EC 2.4.2.7)	Operon_254	Nucleotide transport and metabolism	ATG	 
lmo1525	1559081	1561432	2352	-	1559081	1561432	2352	ORF	similar to single-stranded-DNA-specific exonuclease (RecJ)	hypothetical protein - RAST_Product: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	Operon_254	"Replication, recombination and repair; Function unknown;"	GTG	 
lmo1526	1561538	1561882	345	-	1561538	1561882	345	ORF		hypothetical protein - RAST_Product: FIG00774752: hypothetical protein	FIG00774752: hypothetical protein		Function unknown	ATG	 
lmo1527	1561978	1564242	2265	-	1561978	1564242	2265	ORF	"similar to protein-export membrane protein SecDF; part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF"	bifunctional preprotein translocase subunit SecD/SecF	Protein-export membrane protein SecD (TC 3.A.5.1.1) / Protein-export membrane protein SecF (TC 3.A.5.1.1)	Operon_255	Intracellular trafficking and secretion	ATG	 
lmo1528	1564343	1564633	291	-	1564343	1564633	291	ORF		hypothetical protein - RAST_Product: FIG00774068: hypothetical protein	FIG00774068: hypothetical protein	Operon_255	Not in COGs	ATG	 
lmo1529	1564776	1565105	330	-	1564776	1565105	330	ORF		hypothetical protein - RAST_Product: Preprotein translocase subunit YajC (TC 3.A.5.1.1)	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	Operon_256	Intracellular trafficking and secretion	ATG	 
lmo1530	1565139	1566278	1140	-	1565139	1566278	1140	ORF	"similar to tRNA-guanine transglycosylase Tgt; Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)"	queuine tRNA-ribosyltransferase	tRNA-guanine transglycosylase (EC 2.4.2.29)	Operon_256	Translation	ATG	 
lmo1531	1566365	1567393	1029	-	1566365	1567393	1029	ORF	"similar to S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step"	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	Operon_256	Translation	ATG	 
lmo1532	1567397	1568404	1008	-	1567397	1568404	1008	ORF	"highly similar to Holliday junction DNA helicase RuvB; promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration"	Holliday junction DNA helicase RuvB	Holliday junction DNA helicase RuvB	Operon_256	Replication, recombination and repair	ATG	 
lmo1533	1568420	1569025	606	-	1568420	1569025	606	ORF	"highly similar to Holliday junction DNA helicase (ruvA); plays an essential role in ATP-dependent branch migration of the Holliday junction"	Holliday junction DNA helicase RuvA	Holliday junction DNA helicase RuvA	Operon_256	Replication, recombination and repair	TTG	 
lmo1534	1569149	1570084	936	-	1569149	1570084	936	ORF	similar to L-lactate dehydrogenase	hypothetical protein - RAST_Product: L-lactate dehydrogenase (EC 1.1.1.27)	L-lactate dehydrogenase (EC 1.1.1.27)	Operon_256	Energy production and conversion	ATG	 
lmo1535	1570154	1570879	726	-	1570154	1570879	726	ORF		hypothetical protein - RAST_Product: FIG000859: hypothetical protein YebC	FIG000859: hypothetical protein YebC	Operon_256	Function unknown	ATG	 
lmo1536	1570990	1571838	849	-	1570990	1571838	849	ORF	"similar to prephenate dehydratase PheA; catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis"	prephenate dehydratase	Prephenate dehydratase (EC 4.2.1.51)	Operon_257	Amino acid transport and metabolism	ATG	 
lmo1537	1571905	1573194	1290	-	1571905	1573194	1290	ORF	"conserved GTP binding protein; essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication"	GTPase ObgE	GTP-binding protein Obg	Operon_257	General function prediction only	ATG	 
lmo1538	1573354	1574847	1494	-	1573354	1574847	1494	ORF	"similar to glycerol kinase; Converts glycerol and ADP to glycerol-3-phosphate and ADP"	glycerol kinase	Glycerol kinase (EC 2.7.1.30)	Operon_258	Energy production and conversion	ATG	 
lmo1539	1574922	1575740	819	-	1574922	1575740	819	ORF	similar to glycerol uptake facilitator	hypothetical protein - RAST_Product: Glycerol uptake facilitator protein	Glycerol uptake facilitator protein	Operon_258	Carbohydrate transport and metabolism	ATG	 
lmo1540	1576107	1576397	291	-	1576107	1576397	291	ORF	involved in the peptidyltransferase reaction during translation	50S ribosomal protein L27	LSU ribosomal protein L27p	Operon_259	Translation	ATG	 
lmo1541	1576411	1576728	318	-	1576411	1576728	318	ORF		hypothetical protein - RAST_Product: FIG139598: Potential ribosomal protein	FIG139598: Potential ribosomal protein	Operon_259	Translation	ATG	 
lmo1542	1576747	1577055	309	-	1576747	1577055	309	ORF		50S ribosomal protein L21	LSU ribosomal protein L21p	Operon_259	Translation	ATG	 
lmo1543	1577212	1578573	1362	-	1577212	1578573	1362	ORF	similar to ribonuclease G	hypothetical protein - RAST_Product: Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	Operon_260	Translation	ATG	 
lmo1544	1578625	1579425	801	-	1578625	1579425	801	ORF	highly similar to cell division inhibitor (septum placement) protein MinD	hypothetical protein - RAST_Product: Septum site-determining protein MinD	Septum site-determining protein MinD	Operon_260	Cell cycle control, mitosis and meiosis	ATG	 
lmo1545	1579428	1580105	678	-	1579428	1580105	678	ORF	"similar to cell-division inhibition (septum placement) protein MinC; blocks the formation of polar Z-ring septums"	septum formation inhibitor	Septum site-determining protein MinC	Operon_260	Cell cycle control, mitosis and meiosis	ATG	 
lmo1546	1580283	1580801	519	-	1580283	1580801	519	ORF	similar to cell-shape determining protein MreD	hypothetical protein - RAST_Product: Rod shape-determining protein MreD	Rod shape-determining protein MreD	Operon_261	Cell wall/membrane biogenesis	ATG	 
lmo1547	1580804	1581691	888	-	1580804	1581691	888	ORF	"similar to cell-shape determining protein MreC; in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall"	rod shape-determining protein MreC	Rod shape-determining protein MreC	Operon_261	Cell wall/membrane biogenesis	ATG	 
lmo1548	1581777	1582790	1014	-	1581777	1582790	1014	ORF	"similar to cell-shape determining protein MreB; functions in MreBCD complex in some organisms"	rod shape-determining protein MreB	Rod shape-determining protein MreB	Operon_261	Cell cycle control, mitosis and meiosis	ATG	 
lmo1549	1583242	1583916	675	-	1583242	1583916	675	ORF	"similar to DNA repair protein RadC; Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase"	DNA repair protein RadC	DNA repair protein RadC		Replication, recombination and repair	ATG	 
lmo1550	1583928	1584638	711	-	1583928	1584638	711	ORF	similar to B. subtilis late competence protein ComC (type IV prepilin peptidase)	hypothetical protein - RAST_Product: Late competence protein ComC, processing protease	Late competence protein ComC, processing protease		"Cell motility; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking and secretion;"	ATG	 
lmo1551	1584850	1586139	1290	-	1584850	1586139	1290	ORF	similar to Folyl-polyglutamate synthetase	hypothetical protein - RAST_Product: Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17)	Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17)	Operon_262	Coenzyme transport and metabolism	ATG	 
lmo1552	1586201	1588852	2652	-	1586201	1588852	2652	ORF	"valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain"	valyl-tRNA synthetase	Valyl-tRNA synthetase (EC 6.1.1.9)	Operon_262	Translation	ATG	 
lmo1553	1589175	1590464	1290	-	1589175	1590464	1290	ORF	"highly similar to glutamate-1-semialdehyde 2,1-aminotransferases; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway"	glutamate-1-semialdehyde aminotransferase	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Operon_263	Coenzyme transport and metabolism	TTG	 
lmo1554	1590477	1591451	975	-	1590477	1591451	975	ORF	"highly similar to delta-aminolevulinic acid dehydratases (porphobilinogen synthase); catalyzes the formation of porphobilinogen from 5-aminolevulinate"	delta-aminolevulinic acid dehydratase	Porphobilinogen synthase (EC 4.2.1.24)	Operon_263	Coenzyme transport and metabolism	ATG	 
lmo1555	1591448	1592170	723	-	1591448	1592170	723	ORF	"similar to uroporphyrinogen III cosynthase (HemD); catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis"	uroporphyrinogen-III synthase	Uroporphyrinogen-III synthase (EC 4.2.1.75)	Operon_263	Coenzyme transport and metabolism	ATG	 
lmo1556	1592167	1593096	930	-	1592167	1593096	930	ORF	"highly similar to porphobilinogen deaminases (hydroxymethylbilane synthase); transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis"	porphobilinogen deaminase	Porphobilinogen deaminase (EC 2.5.1.61)	Operon_263	Coenzyme transport and metabolism	ATG	 
lmo1557	1593100	1594407	1308	-	1593100	1594407	1308	ORF	"highly similar to glutamyl-tRNA reductase; catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins"	glutamyl-tRNA reductase	Glutamyl-tRNA reductase (EC 1.2.1.70)	Operon_263	Coenzyme transport and metabolism	ATG	 
lmo1558	1594535	1595119	585	-	1594535	1595119	585	ORF	"Probable GTP-binding protein engB; binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential"	ribosome biogenesis GTP-binding protein YsxC	GTP-binding protein EngB		General function prediction only	ATG	 
lmo1559	1595227	1597149	1923	-	1595227	1597149	1923	ORF	"catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)"	threonyl-tRNA synthetase	Threonyl-tRNA synthetase (EC 6.1.1.3)		Translation	ATG	 
lmo1560	1597499	1598422	924	-	1597499	1598422	924	ORF	Primosomal protein that may act to load helicase DnaC during DNA replication	primosomal protein DnaI	Helicase loader DnaI	Operon_264	Replication, recombination and repair	ATG	 
lmo1561	1598432	1599808	1377	-	1598432	1599808	1377	ORF		chromosome replication initiation / membrane attachment protein DnaB	Helicase loader DnaB	Operon_264	Replication, recombination and repair	TTG	 
lmo1562	1599814	1600278	465	-	1599814	1600278	465	ORF		transcriptional regulator NrdR	Ribonucleotide reductase transcriptional regulator NrdR	Operon_264	Transcription	ATG	 
lmo1563	1600356	1600958	603	-	1600356	1600958	603	ORF	"catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis"	dephospho-CoA kinase	Dephospho-CoA kinase (EC 2.7.1.24)	Operon_264	Coenzyme transport and metabolism	ATG	 
lmo1564	1600975	1601796	822	-	1600975	1601796	822	ORF	"highly similar to formamidopyrimidine-DNA glycosylases; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases"	formamidopyrimidine-DNA glycosylase	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	Operon_264	Replication, recombination and repair	ATG	 
lmo1565	1601820	1604447	2628	-	1601820	1604447	2628	ORF	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair	DNA polymerase I	DNA polymerase I (EC 2.7.7.7)	Operon_264	Replication, recombination and repair	GTG	 
lmo1566	1604613	1605875	1263	-	1604613	1605875	1263	ORF	"highly similar to isocitrate dehyrogenases; Converts isocitrate to alpha ketoglutarate"	isocitrate dehydrogenase	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Operon_265	Energy production and conversion	ATG	 
lmo1567	1605895	1607016	1122	-	1605895	1607016	1122	ORF	"highly similar to citrate synthase subunit II; catalyzes the formation of citrate from acetyl-CoA and oxaloacetate"	citrate synthase	Citrate synthase (si) (EC 2.3.3.1)	Operon_265	Energy production and conversion	ATG	 
lmo1568	1607053	1607514	462	-	1607053	1607514	462	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_265	Function unknown	ATG	 
lmo1569	1607671	1608048	378	-	1607671	1608048	378	ORF	"F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein"	FxsA	FxsA protein	Operon_265	General function prediction only	ATG	 
lmo1570	1608166	1609923	1758	-	1608166	1609923	1758	ORF	"highly similar to pyruvate kinases; catalyzes the formation of phosphoenolpyruvate from pyruvate"	pyruvate kinase	Pyruvate kinase (EC 2.7.1.40)		"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo1571	1610206	1611165	960	-	1610206	1611165	960	ORF	"highly similar to 6-phosphofructokinase; catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis"	6-phosphofructokinase	6-phosphofructokinase (EC 2.7.1.11)		Carbohydrate transport and metabolism	ATG	 
lmo1572	1611449	1612405	957	-	1611449	1612405	957	ORF	"highly similar to acetyl CoA carboxylase (alpha subunit); catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein"	acetyl-CoA carboxylase carboxyltransferase subunit alpha	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	Operon_266	Lipid transport and metabolism	ATG	 
lmo1573	1612395	1613279	885	-	1612395	1613279	885	ORF	"highly similar to acetyl-CoA carboxylase beta subunit; catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits"	acetyl-CoA carboxylase subunit beta	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	Operon_266	Lipid transport and metabolism	TTG	 
lmo1574	1613497	1616823	3327	-	1613497	1616823	3327	ORF	highly similar to DNA polymerase III (alpha subunit) DnaE	hypothetical protein - RAST_Product: DNA polymerase III alpha subunit (EC 2.7.7.7)	DNA polymerase III alpha subunit (EC 2.7.7.7)		Replication, recombination and repair	GTG	 
lmo1575	1616945	1617880	936	-	1616945	1617880	936	ORF		hypothetical protein - RAST_Product: FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	Operon_267	General function prediction only	ATG	 
lmo1576	1617901	1619214	1314	-	1617901	1619214	1314	ORF		hypothetical protein	FIG009439: Cytosolic protein containing multiple CBS domains	Operon_267	Transcription	GTG	 
lmo1577	1619240	1619926	687	-	1619240	1619926	687	ORF	catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins	metal-dependent hydrolase	FIG002379: metal-dependent hydrolase	Operon_267	General function prediction only	ATG	 
lmo1578	1620091	1621188	1098	+	1620091	1621188	1098	ORF	similar to X-Pro dipeptidase	hypothetical protein - RAST_Product: Proline dipeptidase (EC 3.4.13.9)	Proline dipeptidase (EC 3.4.13.9)		Amino acid transport and metabolism	ATG	 
lmo1579	1621230	1622342	1113	-	1621230	1622342	1113	ORF	similar to alanine dehydrogenase	hypothetical protein - RAST_Product: Alanine dehydrogenase (EC 1.4.1.1)	Alanine dehydrogenase (EC 1.4.1.1)		Amino acid transport and metabolism	ATG	 
lmo1580	1622583	1623047	465	+	1622583	1623047	465	ORF		hypothetical protein - RAST_Product: Universal stress protein family	Universal stress protein family		Signal transduction mechanisms	ATG	 
lmo1581	1623099	1624292	1194	-	1623099	1624292	1194	ORF	"highly similar to acetate kinase; AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA"	acetate kinase	Acetate kinase (EC 2.7.2.1)	Operon_268	Energy production and conversion	ATG	 
lmo1582	1624316	1625314	999	-	1624316	1625314	999	ORF	weakly similar to site specific DNA-methyltransferase	hypothetical protein - RAST_Product: Adenine-specific methyltransferase (EC 2.1.1.72)	Adenine-specific methyltransferase (EC 2.1.1.72)	Operon_268	Replication, recombination and repair	TTG	 
lmo1583	1625505	1626002	498	-	1625505	1626002	498	ORF	"similar to thiol peroxidases; antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein"	thiol peroxidase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	Operon_269	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1584	1626064	1626600	537	-	1626064	1626600	537	ORF		hypothetical protein - RAST_Product: BH3197 unknown conserved protein	BH3197 unknown conserved protein	Operon_269	Function unknown	ATG	 
lmo1585	1626620	1627633	1014	-	1626620	1627633	1014	ORF	similar to proteases	hypothetical protein - RAST_Product: Protease IV (EC 3.4.21.-)	Protease IV (EC 3.4.21.-)	Operon_269	"Posttranslational modification, protein turnover, chaperones; Intracellular trafficking and secretion;"	ATG	 
lmo1586	1627812	1628615	804	+	1627812	1628615	804	ORF	catalyzes the phosphorylation of NAD to NADP	inorganic polyphosphate/ATP-NAD kinase	NAD kinase (EC 2.7.1.23)		Carbohydrate transport and metabolism	ATG	 
lmo1587	1628647	1629597	951	-	1628647	1629597	951	ORF	"highly similar to ornithine carbamoyltransferase; catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation"	ornithine carbamoyltransferase	Ornithine carbamoyltransferase (EC 2.1.3.3)	Operon_270	Amino acid transport and metabolism	ATG	 
lmo1588	1629594	1630754	1161	-	1629594	1630754	1161	ORF	highly similar to N-acetylornithine aminotransferase	acetylornithine aminotransferase	Acetylornithine aminotransferase (EC 2.6.1.11)	Operon_270	Amino acid transport and metabolism	ATG	 
lmo1589	1630751	1631503	753	-	1630751	1631503	753	ORF	"highly similar to N-acetylglutamate 5-phosphotransferase; catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate"	acetylglutamate kinase	Acetylglutamate kinase (EC 2.7.2.8)	Operon_270	Amino acid transport and metabolism	GTG	 
lmo1590	1631516	1632712	1197	-	1631516	1632712	1197	ORF	"highly similar to ornithine acetyltransferase and amino-acid acetyltransferases; bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate"	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein	Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Operon_270	Amino acid transport and metabolism	ATG	 
lmo1591	1632728	1633759	1032	-	1632728	1633759	1032	ORF	"similar to N-acetylglutamate gamma-semialdehyde dehydrogenases; catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate"	N-acetyl-gamma-glutamyl-phosphate reductase	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Operon_270	Amino acid transport and metabolism	ATG	 
lmo1592	1633933	1635144	1212	-	1633933	1635144	1212	ORF	"similar to thiamin biosynthesis protein ThiI; Required for the synthesis of the thiazole moiety"	thiamine biosynthesis protein ThiI	tRNA S(4)U 4-thiouridine synthase (former ThiI)	Operon_271	Coenzyme transport and metabolism	TTG	 
lmo1593	1635146	1636285	1140	-	1635146	1636285	1140	ORF	similar to iron-sulfur cofactor synthesis protein nifS	hypothetical protein	Cysteine desulfurase (EC 2.8.1.7)	Operon_271	Amino acid transport and metabolism	ATG	 
lmo1594	1636412	1638127	1716	-	1636412	1638127	1716	ORF	"similar to B. subtilis negative regulator of FtsZ ring formation (EzrA); acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation"	septation ring formation regulator EzrA	Septation ring formation regulator EzrA		Cell cycle control, mitosis and meiosis	ATG	 
lmo1595	1638420	1638908	489	+	1638420	1638908	489	ORF		hypothetical protein - RAST_Product: Free methionine-(R)-sulfoxide reductase, contains GAF domain	Free methionine-(R)-sulfoxide reductase, contains GAF domain		Signal transduction mechanisms	ATG	 
lmo1596	1639120	1639722	603	+	1639120	1639722	603	ORF	"primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination"	30S ribosomal protein S4	SSU ribosomal protein S4p (S9e)		Translation	ATG	 
lmo1597	1640225	1641004	780	-	1640225	1641004	780	ORF	lmo1597	hypothetical protein - RAST_Product: FIG00774834: hypothetical protein	FIG00774834: hypothetical protein		Not in COGs	GTG	 
lmo1598	1641284	1642543	1260	-	1641284	1642543	1260	ORF		tyrosyl-tRNA synthetase	Tyrosyl-tRNA synthetase (EC 6.1.1.1) ## cluster 1		Translation	ATG	 
lmo1599	1642865	1643872	1008	-	1642865	1643872	1008	ORF		catabolite control protein A	Catabolite control protein A		Transcription	ATG	 
lmo1600	1644106	1645191	1086	-	1644106	1645191	1086	ORF	catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	Chorismate mutase I (EC 5.4.99.5) / 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)		Amino acid transport and metabolism	ATG	 
lmo1601	1645412	1645936	525	-	1645412	1645936	525	ORF	similar to general stress protein	hypothetical protein - RAST_Product: general stress protein	general stress protein	Operon_272	General function prediction only	ATG	 
lmo1602	1645958	1646413	456	-	1645958	1646413	456	ORF		hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_272	General function prediction only	ATG	 
lmo1603	1646669	1647781	1113	+	1646669	1647781	1113	ORF	similar to aminopeptidase	hypothetical protein - RAST_Product: aminopeptidase	aminopeptidase		Amino acid transport and metabolism	ATG	 
lmo1604	1647821	1648366	546	-	1647821	1648366	546	ORF	similar to 2-cys peroxiredoxin	hypothetical protein - RAST_Product: Alkyl hydroperoxide reductase subunit C-like protein	Alkyl hydroperoxide reductase subunit C-like protein		Posttranslational modification, protein turnover, chaperones	GTG	 
lmo1605	1648511	1649854	1344	-	1648511	1649854	1344	ORF	"similar to UDP-N-acetyl muramate-alanine ligases; Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis"	UDP-N-acetylmuramate--L-alanine ligase	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	Operon_273	Cell wall/membrane biogenesis	ATG	 
lmo1606	1650149	1652500	2352	-	1650149	1652500	2352	ORF	similar to DNA translocase	hypothetical protein - RAST_Product: Cell division protein FtsK	Cell division protein FtsK	Operon_273	Cell cycle control, mitosis and meiosis	ATG	 
lmo1607	1652810	1653427	618	-	1652810	1653427	618	ORF	similar phenylalanyl-tRNA synthetase (beta subunit)	hypothetical protein - RAST_Product: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	Operon_274	General function prediction only	GTG	 
lmo1608	1653433	1654233	801	-	1653433	1654233	801	ORF		hypothetical protein - RAST_Product: conserved hypothetical protein	conserved hypothetical protein	Operon_274	Function unknown	ATG	 
lmo1609	1654268	1654579	312	-	1654268	1654579	312	ORF	similar to thioredoxin	hypothetical protein - RAST_Product: FIG009688: Thioredoxin	FIG009688: Thioredoxin	Operon_274	"Posttranslational modification, protein turnover, chaperones; Energy production and conversion;"	ATG	 
lmo1610	1654691	1654909	219	-	1654691	1654909	219	ORF		hypothetical protein	FIG00774415: hypothetical protein	Operon_274	Not in COGs	ATG	 
lmo1611	1654902	1655975	1074	-	1654902	1655975	1074	ORF	similar to aminopeptidase	hypothetical protein - RAST_Product: glutamyl-aminopeptidase, putative( EC:3.4.11.7 )	glutamyl-aminopeptidase, putative( EC:3.4.11.7 )	Operon_274	Carbohydrate transport and metabolism	ATG	 
lmo1612	1656173	1656484	312	+	1656173	1656484	312	ORF		hypothetical protein - RAST_Product: FIG00774243: hypothetical protein	FIG00774243: hypothetical protein		Function unknown	ATG	 
lmo1613	1656521	1656769	249	-	1656521	1656769	249	ORF		hypothetical protein - RAST_Product: FIG00774581: hypothetical protein	FIG00774581: hypothetical protein		Function unknown	ATG	 
lmo1614	1656903	1657754	852	-	1656903	1657754	852	ORF		hypothetical protein - RAST_Product: CDS_ID OB2240	CDS_ID OB2240		General function prediction only	GTG	 
lmo1615	1657815	1658459	645	-	1657815	1658459	645	ORF	"tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine"	tRNA (guanine-N(7)-)-methyltransferase	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	Operon_275	General function prediction only	ATG	 
lmo1616	1658466	1659248	783	-	1658466	1659248	783	ORF		hypothetical protein - RAST_Product: aminoglycoside phosphotransferase family protein	aminoglycoside phosphotransferase family protein	Operon_275	Cell wall/membrane biogenesis	ATG	 
lmo1617	1659457	1660926	1470	-	1659457	1660926	1470	ORF	similar to multidrug-efflux transporter	hypothetical protein	Membrane component of multidrug resistance system	Operon_276	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	TTG	 
lmo1618	1660923	1661363	441	-	1660923	1661363	441	ORF	similar to transcription regulator MarR family	hypothetical protein - RAST_Product: Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Operon_276	Transcription	ATG	 
lmo1619	1661588	1662457	870	-	1661588	1662457	870	ORF		D-amino acid aminotransferase	D-alanine aminotransferase (EC 2.6.1.21)	Operon_277	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo1620	1662570	1663982	1413	-	1662570	1663982	1413	ORF	"similar to Xaa-His dipeptidase; divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases"	dipeptidase PepV	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	Operon_277	Amino acid transport and metabolism	ATG	 
lmo1621	1664057	1664470	414	-	1664057	1664470	414	ORF	weakly similar to E. coli MutT protein (dGTP pyrophosphohydrolase	hypothetical protein - RAST_Product: MutT/nudix family protein	MutT/nudix family protein	Operon_277	"Replication, recombination and repair; General function prediction only;"	ATG	 
lmo1622	1664575	1665405	831	+	1664575	1665405	831	ORF		hypothetical protein - RAST_Product: YjeF protein, C-terminal domain	YjeF protein, C-terminal domain		Carbohydrate transport and metabolism	TTG	 
lmo1623	1665444	1666097	654	-	1665444	1666097	654	ORF		hypothetical protein - RAST_Product: FIG00775051: hypothetical protein	FIG00775051: hypothetical protein	Operon_278	Lipid transport and metabolism	ATG	 
lmo1624	1666107	1667720	1614	-	1666107	1667720	1614	ORF	similar to putative transporters	hypothetical protein - RAST_Product: Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids	Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids	Operon_278	General function prediction only	ATG	 
lmo1625	1667831	1669444	1614	-	1667831	1669444	1614	ORF	similar to putative transporters	hypothetical protein	Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids	Operon_279	General function prediction only	ATG	 
lmo1626	1669529	1669966	438	-	1669529	1669966	438	ORF	lmo1626	hypothetical protein - RAST_Product: FIG00774419: hypothetical protein	FIG00774419: hypothetical protein	Operon_279	Not in COGs	ATG	 
lmo1627	1670037	1670810	774	-	1670037	1670810	774	ORF	"highly similar to tryptophan synthase (alpha subunit); catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis"	tryptophan synthase subunit alpha	Tryptophan synthase alpha chain (EC 4.2.1.20)	Operon_280	Amino acid transport and metabolism	ATG	 
lmo1628	1670803	1672005	1203	-	1670803	1672005	1203	ORF	"highly similar to tryptophan synthase (beta subunit); catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate"	tryptophan synthase subunit beta	Tryptophan synthase beta chain (EC 4.2.1.20)	Operon_280	Amino acid transport and metabolism	ATG	 
lmo1629	1672008	1672616	609	-	1672008	1672616	609	ORF	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis	N-(5'-phosphoribosyl)anthranilate isomerase	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	Operon_280	Amino acid transport and metabolism	ATG	 
lmo1630	1672613	1673371	759	-	1672613	1673371	759	ORF	"highly similar to indol-3-glycerol phosphate synthases; involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water"	indole-3-glycerol-phosphate synthase	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	Operon_280	Amino acid transport and metabolism	ATG	 
lmo1631	1673368	1674387	1020	-	1673368	1674387	1020	ORF	"highly similar to anthranilate phosphoribosyltransferase; Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate"	anthranilate phosphoribosyltransferase	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	Operon_280	Amino acid transport and metabolism	ATG	 
lmo1632	1674359	1674964	606	-	1674359	1674964	606	ORF	"highly similar to anthranilate synthase beta subunit; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity"	anthranilate synthase component II	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	Operon_280	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo1633	1674961	1676325	1365	-	1674961	1676325	1365	ORF	"highly similar to anthranilate synthase alpha subunit; with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine"	anthranilate synthase component I	Anthranilate synthase, aminase component (EC 4.1.3.27)	Operon_280	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo1634	1677409	1680009	2601	+	1677409	1680009	2601	ORF	similar to Alcohol-acetaldehyde dehydrogenase	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	"Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)"		Energy production and conversion	ATG	 
lmo1635	1680132	1680560	429	+	1680132	1680560	429	ORF		"hypothetical protein - RAST_Product: PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"	"PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"	Operon_281	Function unknown	ATG	 
lmo1636	1680644	1681564	921	+	1680644	1681564	921	ORF	similar to similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_281	Defense/virulence mechanisms	ATG	 
lmo1637	1681561	1682628	1068	+	1681561	1682628	1068	ORF	similar to membrane proteins	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_281	General function prediction only	ATG	 
lmo1638	1682664	1683638	975	-	1682664	1683638	975	ORF		hypothetical protein - RAST_Product: Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)	Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)	Operon_282	Defense/virulence mechanisms	GTG	 
lmo1639	1683635	1684216	582	-	1683635	1684216	582	ORF	similar to dna-3-methyladenine glycosidase	hypothetical protein - RAST_Product: DNA-3-methyladenine glycosylase (EC 3.2.2.20)	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	Operon_282	Replication, recombination and repair	TTG	 
lmo1640	1684229	1684462	234	-	1684229	1684462	234	ORF	lmo1640	hypothetical protein - RAST_Product: FIG00774240: hypothetical protein	FIG00774240: hypothetical protein	Operon_282	Not in COGs	ATG	 
lmo1641	1684563	1687265	2703	-	1684563	1687265	2703	ORF	"highly similar to aconitate hydratases; Catalyzes the conversion of citrate to isocitrate"	aconitate hydratase	Aconitate hydratase (EC 4.2.1.3)		Energy production and conversion	ATG	 
lmo1642	1687420	1688223	804	-	1687420	1688223	804	ORF	similar to putative sigma factor regulator	hypothetical protein - RAST_Product: STAS domain protein	STAS domain protein	Operon_283	Signal transduction mechanisms	ATG	 
lmo1643	1688248	1688670	423	-	1688248	1688670	423	ORF	lmo1643	hypothetical protein - RAST_Product: STAS domain protein	STAS domain protein	Operon_283	Not in COGs	ATG	 
lmo1644	1688670	1691888	3219	-	1688670	1691888	3219	ORF	similar to SNF2-type helicase	hypothetical protein - RAST_Product: COG0553: Superfamily II DNA/RNA helicases, SNF2 family	COG0553: Superfamily II DNA/RNA helicases, SNF2 family	Operon_283	"Transcription; Replication, recombination and repair;"	ATG	 
lmo1645	1691972	1695043	3072	-	1691972	1695043	3072	ORF	similar to ATP-dependent dsDNA exonuclease SbcC	hypothetical protein - RAST_Product: Exonuclease SbcC	Exonuclease SbcC		Replication, recombination and repair	ATG	 
lmo1646	1695040	1696164	1125	-	1695040	1696164	1125	ORF	similar to putative exonucleases SbcD	hypothetical protein - RAST_Product: Exonuclease SbcD	Exonuclease SbcD		Replication, recombination and repair	ATG	 
lmo1647	1696280	1696888	609	+	1696280	1696888	609	ORF	similar to 1-acylglycerol-3-phosphate O-acyltransferases	hypothetical protein - RAST_Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)		Lipid transport and metabolism	TTG	 
lmo1648	1696940	1697302	363	-	1696940	1697302	363	ORF	lmo1648	hypothetical protein - RAST_Product: FIG00775341: hypothetical protein	FIG00775341: hypothetical protein	Operon_284	Not in COGs	ATG	 
lmo1649	1697476	1697991	516	-	1697476	1697991	516	ORF	lmo1649	hypothetical protein - RAST_Product: FIG00774115: hypothetical protein	FIG00774115: hypothetical protein	Operon_284	Not in COGs	TTG	 
lmo1650	1698165	1698653	489	-	1698165	1698653	489	ORF		hypothetical protein - RAST_Product: conserved hypothetical protein	conserved hypothetical protein	Operon_284	Posttranslational modification, protein turnover, chaperones	GTG	 
lmo1651	1698734	1700539	1806	-	1698734	1700539	1806	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding and permease protein	ABC transporter, ATP-binding and permease protein	Operon_284	Defense/virulence mechanisms	ATG	 
lmo1652	1700523	1702292	1770	-	1700523	1702292	1770	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding/permease protein	ABC transporter, ATP-binding/permease protein	Operon_284	Defense/virulence mechanisms	TTG	 
lmo1653	1702695	1703315	621	-	1702695	1703315	621	ORF		putative cellsurface protein	Putative cellsurface protein	Operon_285	Not in COGs	TTG	 
lmo1654	1703330	1703824	495	-	1703330	1703824	495	ORF		putative cellsurface protein	Putative cellsurface protein	Operon_285	Not in COGs	ATG	 
lmo1655	1704618	1705181	564	-	1704618	1705181	564	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein		Defense/virulence mechanisms	ATG	 
lmo1656	1705199	1705630	432	-	1705199	1705630	432	ORF	lmo1656	hypothetical protein - RAST_Product: FIG00774637: hypothetical protein	FIG00774637: hypothetical protein		Not in COGs	ATG	 
lmo1657	1706204	1707088	885	-	1706204	1707088	885	ORF	"EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu"	elongation factor Ts	Translation elongation factor Ts	Operon_286	Translation	ATG	 
lmo1658	1707168	1707917	750	-	1707168	1707917	750	ORF	"one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit"	30S ribosomal protein S2	SSU ribosomal protein S2p (SAe)	Operon_286	Translation	ATG	 
lmo1659	1708312	1708518	207	+	1708312	1708518	207	ORF	lmo1659	hypothetical protein			Not in COGs	ATG	 
lmo1660	1708857	1711268	2412	-	1708857	1711268	2412	ORF	"leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase"	leucyl-tRNA synthetase	Leucyl-tRNA synthetase (EC 6.1.1.4)		Translation	GTG	 
lmo1661	1711672	1712637	966	+	1711672	1712637	966	ORF		hypothetical protein - RAST_Product: COG1242: Predicted Fe-S oxidoreductase	COG1242: Predicted Fe-S oxidoreductase	Operon_287	General function prediction only	GTG	 
lmo1662	1712634	1713209	576	+	1712634	1713209	576	ORF	similar to conserved hypothetical protein	hypothetical protein - RAST_Product: SAM-dependent methyltransferase, MraW methylase family (EC 2.1.1.-)	SAM-dependent methyltransferase, MraW methylase family (EC 2.1.1.-)	Operon_287	"Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo1663	1713234	1715099	1866	-	1713234	1715099	1866	ORF	similar to asparagine synthetase	hypothetical protein - RAST_Product: asparagine synthase( EC:6.3.5.4 )	asparagine synthase( EC:6.3.5.4 )		Amino acid transport and metabolism	ATG	 
lmo1664	1715236	1716435	1200	-	1715236	1716435	1200	ORF	"methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase"	S-adenosylmethionine synthetase	S-adenosylmethionine synthetase (EC 2.5.1.6)		Coenzyme transport and metabolism	TTG	 
lmo1665	1716858	1717160	303	+	1716858	1717160	303	ORF	lmo1665	hypothetical protein - RAST_Product: FIG00774797: hypothetical protein	FIG00774797: hypothetical protein		Not in COGs	ATG	 
lmo1666	1717193	1722328	5136	-	1717193	1722328	5136	ORF		peptidoglycan linked protein (LPXTG)	Putative peptidoglycan bound protein (LPXTG motif) Lmo1666 homolog	Operon_288	Not in COGs	ATG	 
lmo1667	1722431	1723339	909	-	1722431	1723339	909	ORF	similar to L-lactate dehydrogenases	hypothetical protein - RAST_Product: L-lactate dehydrogenase (EC 1.1.1.27)	L-lactate dehydrogenase (EC 1.1.1.27)	Operon_288	Energy production and conversion	TTG	 
lmo1668	1723356	1723598	243	-	1723356	1723598	243	ORF	some similarity to hypothetical proteins	hypothetical protein - RAST_Product: FIG00774067: hypothetical protein	FIG00774067: hypothetical protein	Operon_288	Not in COGs	TTG	 
lmo1669	1723649	1724122	474	-	1723649	1724122	474	ORF	some similarity to hypothetical proteins	hypothetical protein - RAST_Product: 8-oxo-dGTPase Bsu YtkD / 8-oxo-GTPase Bsu YtkD	8-oxo-dGTPase Bsu YtkD / 8-oxo-GTPase Bsu YtkD	Operon_288	"Replication, recombination and repair; General function prediction only;"	TTG	 
lmo1670	1724196	1724462	267	+	1724196	1724462	267	ORF		hypothetical protein - RAST_Product: Protein YidD	Protein YidD		Function unknown	ATG	 
lmo1671	1724612	1725565	954	+	1724612	1725565	954	ORF	similar to ABC transporter and adhesion proteins	hypothetical protein - RAST_Product: Lmo1671 protein	Lmo1671 protein		Inorganic ion transport and metabolism	TTG	 
lmo1672	1725584	1726993	1410	-	1725584	1726993	1410	ORF	"similar to O-succinylbenzoic acid-CoA ligase; converts O-succinylbenzoate to O-succinylbenzoyl-CoA"	O-succinylbenzoic acid--CoA ligase	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	Operon_289	"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism;"	ATG	 
lmo1673	1727009	1727827	819	-	1727009	1727827	819	ORF	"similar to dihydroxynapthoic acid synthetase; catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA"	naphthoate synthase	Naphthoate synthase (EC 4.1.3.36)	Operon_289	Coenzyme transport and metabolism	ATG	 
lmo1674	1727824	1728651	828	-	1727824	1728651	828	ORF	similar to prolyl aminopetidases	hypothetical protein - RAST_Product: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	Operon_289	General function prediction only	ATG	 
lmo1675	1728653	1730395	1743	-	1728653	1730395	1743	ORF	"similar to 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / 2-oxoglutarate decarboxylase; SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis"	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	Operon_289	Coenzyme transport and metabolism	ATG	 
lmo1676	1730392	1731780	1389	-	1730392	1731780	1389	ORF	"similar to menaquinone-specific isochorismate synthase; synthesizes isochorismate acid from chorismate"	menaquinone-specific isochorismate synthase	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	Operon_289	"Coenzyme transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism;"	ATG	 
lmo1677	1731955	1732893	939	+	1731955	1732893	939	ORF	"similar to menaquinone biosynthesis proteins; catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate"	1,4-dihydroxy-2-naphthoate octaprenyltransferase	1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74)		Coenzyme transport and metabolism	ATG	 
lmo1678	1732926	1734779	1854	-	1732926	1734779	1854	ORF	"similar to 5-methyltetrahydrofolate-homocysteine methyltransferase (metH); catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions"	bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) / Homolog of homocysteine-binding domain	Operon_290	Amino acid transport and metabolism	GTG	 
lmo1679	1734776	1735948	1173	-	1734776	1735948	1173	ORF	"similar to cystathionine beta-lyase; catalyzes the formation of L-homocysteine from cystathionine"	cystathionine beta-lyase	Cystathionine beta-lyase (EC 4.4.1.8)	Operon_290	Amino acid transport and metabolism	GTG	 
lmo1680	1735941	1737065	1125	-	1735941	1737065	1125	ORF	similar to cystathionine gamma-synthase	hypothetical protein - RAST_Product: Cystathionine gamma-synthase (EC 2.5.1.48)	Cystathionine gamma-synthase (EC 2.5.1.48)	Operon_290	Amino acid transport and metabolism	ATG	 
lmo1681	1737087	1739384	2298	-	1737087	1739384	2298	ORF	"similar to cobalamin-independent methionine synthase; catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine"	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	Operon_290	Amino acid transport and metabolism	ATG	 
lmo1682	1739674	1740849	1176	-	1739674	1740849	1176	ORF	similar to transmembrane transport proteins	hypothetical protein - RAST_Product: major facilitator family transporter	major facilitator family transporter		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo1683	1748263	1748709	447	-	1748263	1748709	447	ORF	similar to transcription regulators (Fur family), PerR in B. subtilis	hypothetical protein - RAST_Product: Peroxide stress regulator PerR, FUR family	Peroxide stress regulator PerR, FUR family		Inorganic ion transport and metabolism	ATG	 
lmo1684	1748792	1749733	942	-	1748792	1749733	942	ORF	similar to glycerate dehydrogenases	hypothetical protein - RAST_Product: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)		"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo1685	1749878	1751176	1299	+	1749878	1751176	1299	ORF	converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate	glutamate-1-semialdehyde aminotransferase	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	Operon_291	Coenzyme transport and metabolism	ATG	 
lmo1686	1751283	1752371	1089	+	1751283	1752371	1089	ORF		hypothetical protein - RAST_Product: Putative lipoprotein SAV1865	Putative lipoprotein SAV1865	Operon_291	Function unknown	ATG	 
lmo1687	1752413	1752940	528	-	1752413	1752940	528	ORF		hypothetical protein - RAST_Product: Cysteinyl-tRNA synthetase related protein	Cysteinyl-tRNA synthetase related protein		Translation	ATG	 
lmo1688	1753095	1753841	747	-	1753095	1753841	747	ORF	"similar to glucose 1-dehydrogenase; Catalyzes a key regulatory step in fatty acid biosynthesis"	enoyl-(acyl carrier protein) reductase	Enoyl-[acyl-carrier-protein] reductase [NADPH] (EC 1.3.1.10)	Operon_292	"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo1689	1753845	1754942	1098	-	1753845	1754942	1098	ORF	similar to A/G-specific adenine glycosylase	hypothetical protein - RAST_Product: A/G-specific adenine glycosylase (EC 3.2.2.-)	A/G-specific adenine glycosylase (EC 3.2.2.-)	Operon_292	Replication, recombination and repair	ATG	 
lmo1690	1755143	1756123	981	+	1755143	1756123	981	ORF		hypothetical protein - RAST_Product: Hypothetical protein SAV1869	Hypothetical protein SAV1869		General function prediction only	TTG	 
lmo1691	1756156	1756617	462	-	1756156	1756617	462	ORF	similar to deoxyuridine triphosphate nucleotidohydrolases	hypothetical protein - RAST_Product: Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	Operon_293	Nucleotide transport and metabolism	TTG	 
lmo1692	1756629	1756862	234	-	1756629	1756862	234	ORF	lmo1692	hypothetical protein - RAST_Product: FIG00775106: hypothetical protein	FIG00775106: hypothetical protein	Operon_293	Not in COGs	TTG	 
lmo1693	1756864	1757673	810	-	1756864	1757673	810	ORF	"Regulatory protein recX; binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities"	recombination regulator RecX	Regulatory protein recX		General function prediction only	ATG	 
lmo1694	1757771	1758673	903	+	1757771	1758673	903	ORF	similar to CDP-abequose synthase	hypothetical protein - RAST_Product: conserved hypothetical protein	conserved hypothetical protein		General function prediction only	TTG	 
lmo1695	1758694	1761291	2598	-	1758694	1761291	2598	ORF	similar to putative membrane proteins	hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_294	Cell wall/membrane biogenesis	ATG	 
lmo1696	1761318	1761992	675	-	1761318	1761992	675	ORF		hypothetical protein - RAST_Product: FIG00774792: hypothetical protein	FIG00774792: hypothetical protein	Operon_294	Defense/virulence mechanisms	ATG	 
lmo1697	1762200	1763165	966	+	1762200	1763165	966	ORF	similar to putative transmembrane proteins	hypothetical protein - RAST_Product: cation efflux family protein	cation efflux family protein		Inorganic ion transport and metabolism	ATG	 
lmo1698	1763209	1763751	543	-	1763209	1763751	543	ORF	similar to ribosomal-protein-alanine N-acetyltransferase	hypothetical protein - RAST_Product: Ribosomal-protein-S5p-alanine acetyltransferase	Ribosomal-protein-S5p-alanine acetyltransferase		Translation	ATG	 
lmo1699	1763941	1764843	903	+	1763941	1764843	903	ORF	some similarities to methyl-accepting chemotaxis proteins	hypothetical protein - RAST_Product: methyl-accepting chemotaxis protein	methyl-accepting chemotaxis protein	Operon_295	"Cell motility; Signal transduction mechanisms;"	ATG	 
lmo1700	1764871	1765077	207	+	1764871	1765077	207	ORF	lmo1700	hypothetical protein - RAST_Product: FIG00774912: hypothetical protein	FIG00774912: hypothetical protein	Operon_295	Not in COGs	TTG	 
lmo1701	1765117	1765470	354	-	1765117	1765470	354	ORF	lmo1701	hypothetical protein - RAST_Product: FIG00774597: hypothetical protein	FIG00774597: hypothetical protein	Operon_296	Not in COGs	ATG	 
lmo1702	1765499	1765900	402	-	1765499	1765900	402	ORF	similar to glutathione transferase - fosfomycin resistance protein	hypothetical protein - RAST_Product: Fosfomycin resistance protein FosX	Fosfomycin resistance protein FosX	Operon_296	Amino acid transport and metabolism	ATG	 
lmo1703	1765915	1767294	1380	-	1765915	1767294	1380	ORF	similar to similar to RNA methyltransferases	hypothetical protein - RAST_Product: RNA methyltransferase, TrmA family	RNA methyltransferase, TrmA family	Operon_296	Translation	ATG	 
lmo1704	1767359	1767739	381	-	1767359	1767739	381	ORF		hypothetical protein - RAST_Product: OsmC-like protein	OsmC-like protein	Operon_296	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1705	1767846	1768490	645	+	1767846	1768490	645	ORF	similar to deoxyguanosine kinase/deoxyadenosine kinase(I) subunit	hypothetical protein - RAST_Product: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)	Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)		Nucleotide transport and metabolism	ATG	 
lmo1706	1768520	1769389	870	-	1768520	1769389	870	ORF	similar to transport proteins	hypothetical protein - RAST_Product: Inner membrane protein YihY, formerly thought to be RNase BN	Inner membrane protein YihY, formerly thought to be RNase BN		Function unknown	GTG	 
lmo1707	1769479	1769700	222	+	1769479	1769700	222	ORF	lmo1707	hypothetical protein	Hypothetical protein YfkK		Function unknown	ATG	 
lmo1708	1769720	1770526	807	-	1769720	1770526	807	ORF	similar to aminoglycoside N3'-acetyltransferases	hypothetical protein - RAST_Product: aminoglycoside N3-acetyltransferase	aminoglycoside N3-acetyltransferase	Operon_297	Defense/virulence mechanisms	ATG	 
lmo1709	1770648	1771406	759	-	1770648	1771406	759	ORF	"similar to methionine aminopeptidases; catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn"	methionine aminopeptidase	Methionine aminopeptidase (EC 3.4.11.18)	Operon_297	Translation	ATG	 
lmo1710	1771594	1772040	447	+	1771594	1772040	447	ORF	similar to putative flavodoxin	hypothetical protein - RAST_Product: Flavodoxin	Flavodoxin		Energy production and conversion	ATG	 
lmo1711	1772178	1773410	1233	+	1772178	1773410	1233	ORF	highly similar to aminopeptidases	hypothetical protein - RAST_Product: Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	Operon_298	Amino acid transport and metabolism	ATG	 
lmo1712	1773514	1774773	1260	+	1773514	1774773	1260	ORF	similar to multidrug resistance protein, integral membrane protein	hypothetical protein - RAST_Product: FIG00774890: hypothetical protein	FIG00774890: hypothetical protein	Operon_298	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo1713	1774991	1775983	993	+	1774991	1775983	993	ORF	similar to cell-shape determining proteins	rod shape-determining protein MreB	Cell-shape determining protein MreBH		Cell cycle control, mitosis and meiosis	ATG	 
lmo1714	1776257	1776829	573	-	1776257	1776829	573	ORF	lmo1714	hypothetical protein - RAST_Product: FIG00774475: hypothetical protein	FIG00774475: hypothetical protein		Not in COGs	ATG	 
lmo1715	1776910	1777578	669	-	1776910	1777578	669	ORF		hypothetical protein	methyltransferase		"Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo1716	1777763	1778338	576	+	1777763	1778338	576	ORF	similar to putative transcription regulators	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family		Transcription	ATG	 
lmo1717	1778415	1779482	1068	-	1778415	1779482	1068	ORF		hypothetical protein	Prophage Lp2 protein 6		Function unknown	ATG	 
lmo1718	1779714	1780802	1089	-	1779714	1780802	1089	ORF	similar to putative outer surface protein	hypothetical protein - RAST_Product: Outer surface protein of unknown function, cellobiose operon	Outer surface protein of unknown function, cellobiose operon	Operon_299	Function unknown	ATG	 
lmo1719	1780824	1781126	303	-	1780824	1781126	303	ORF	similar to phosphotransferase system (PTS) lichenan-specific enzyme IIA component	"hypothetical protein - RAST_Product: PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69); PTS system, cellobiose-specific IIA component (EC 2.7.1.69)"	"PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69); PTS system, cellobiose-specific IIA component (EC 2.7.1.69)"	Operon_299	Carbohydrate transport and metabolism	ATG	 
lmo1720	1781196	1781504	309	-	1781196	1781504	309	ORF	similar to phosphotransferase system (PTS) lichenan-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Operon_299	Carbohydrate transport and metabolism	ATG	 
lmo1721	1781661	1784339	2679	-	1781661	1784339	2679	ORF	similar to transcriptional regulator (NifA/NtrC family)	hypothetical protein - RAST_Product: NtrC family Transcriptional regulator, ATPase domain	NtrC family Transcriptional regulator, ATPase domain	Operon_299	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1722	1784473	1785798	1326	-	1784473	1785798	1326	ORF	similar to ATP-dependent RNA helicases	hypothetical protein - RAST_Product: ATP-dependent RNA helicase YfmL	ATP-dependent RNA helicase YfmL		"Replication, recombination and repair; Transcription; Translation;"	ATG	 
lmo1723	1785841	1786614	774	-	1785841	1786614	774	ORF	lmo1723	hypothetical protein - RAST_Product: FIG00774724: hypothetical protein	FIG00774724: hypothetical protein	Operon_300	Not in COGs	ATG	 
lmo1724	1786607	1787287	681	-	1786607	1787287	681	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_300	Defense/virulence mechanisms	ATG	 
lmo1725	1787280	1787648	369	-	1787280	1787648	369	ORF	similar to transcriptional regulator (GntR family)	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Operon_300	Transcription	ATG	 
lmo1726	1787769	1788752	984	-	1787769	1788752	984	ORF		hypothetical protein - RAST_Product: oxidoreductase, Gfo/Idh/MocA family	oxidoreductase, Gfo/Idh/MocA family	Operon_301	General function prediction only	ATG	 
lmo1727	1788812	1789777	966	-	1788812	1789777	966	ORF	similar to transcription regulators (LacI family)	hypothetical protein - RAST_Product: Maltose operon transcriptional repressor MalR, LacI family	Maltose operon transcriptional repressor MalR, LacI family	Operon_301	Transcription	GTG	 
lmo1728	1789825	1793085	3261	-	1789825	1793085	3261	ORF	some similarities to cellobiose-phosphorylase	hypothetical protein	sugar phosphorylase	Operon_301	Carbohydrate transport and metabolism	GTG	 
lmo1729	1793082	1795253	2172	-	1793082	1795253	2172	ORF	similar to beta-glucosidases	hypothetical protein - RAST_Product: Beta-glucosidase (EC 3.2.1.21)	Beta-glucosidase (EC 3.2.1.21)	Operon_301	Carbohydrate transport and metabolism	ATG	 
lmo1730	1795681	1796925	1245	+	1795681	1796925	1245	ORF	similar to sugar ABC transporter binding protein	hypothetical protein - RAST_Product: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein	N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein	Operon_302	Carbohydrate transport and metabolism	ATG	 
lmo1731	1796987	1797880	894	+	1796987	1797880	894	ORF	similar to sugar ABC transporter, permease protein	hypothetical protein - RAST_Product: N-Acetyl-D-glucosamine ABC transport system, permease protein 1	N-Acetyl-D-glucosamine ABC transport system, permease protein 1	Operon_302	Carbohydrate transport and metabolism	ATG	 
lmo1732	1797897	1798727	831	+	1797897	1798727	831	ORF	similar to sugar ABC transporter, permease protein	hypothetical protein - RAST_Product: N-Acetyl-D-glucosamine ABC transport system, permease protein 2	N-Acetyl-D-glucosamine ABC transport system, permease protein 2	Operon_302	Carbohydrate transport and metabolism	ATG	 
lmo1733	1798772	1800241	1470	-	1798772	1800241	1470	ORF	"similar to glutamate synthase (small subunit); glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate"	glutamate synthase subunit beta	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Operon_303	"Amino acid transport and metabolism; General function prediction only;"	ATG	 
lmo1734	1800256	1804848	4593	-	1800256	1804848	4593	ORF	similar to glutamate synthase (large subunit)	hypothetical protein - RAST_Product: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Operon_303	Amino acid transport and metabolism	ATG	 
lmo1735	1805041	1805928	888	+	1805041	1805928	888	ORF		transcription activator of glutamate synthase operon GltC	GltC, transcription activator of glutamate synthase operon		Transcription	ATG	 
lmo1736	1805925	1806443	519	-	1805925	1806443	519	ORF		hypothetical protein - RAST_Product: Acetyltransferase	Acetyltransferase	Operon_304	General function prediction only	ATG	 
lmo1737	1806446	1807552	1107	-	1806446	1807552	1107	ORF	similar to glycerol dehydrogenase	hypothetical protein	Glycerol dehydrogenase (EC 1.1.1.6)	Operon_304	Energy production and conversion	TTG	 
lmo1738	1807643	1808458	816	-	1807643	1808458	816	ORF	similar to amino acid ABC transporter (binding protein)	hypothetical protein - RAST_Product: Amino acid ABC transporter, amino acid-binding protein	Amino acid ABC transporter, amino acid-binding protein	Operon_305	"Amino acid transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo1739	1808460	1809107	648	-	1808460	1809107	648	ORF	similar to amino acid (glutamine) ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: amino acid ABC transporter, ATP-binding protein	amino acid ABC transporter, ATP-binding protein	Operon_305	Amino acid transport and metabolism	ATG	 
lmo1740	1809118	1809759	642	-	1809118	1809759	642	ORF	similar to amino acid (glutamine) ABC transporter, permease protein	hypothetical protein - RAST_Product: ABC transporter membrane-spanning permease - glutamine transport	ABC transporter membrane-spanning permease - glutamine transport	Operon_305	Amino acid transport and metabolism	ATG	 
lmo1741	1810157	1811197	1041	-	1810157	1811197	1041	ORF	similar to two-component sensor histidine kinase	hypothetical protein - RAST_Product: Two-component sensor histidine kinase BceS	Two-component sensor histidine kinase BceS	Operon_306	Signal transduction mechanisms	ATG	 
lmo1742	1811219	1812961	1743	-	1811219	1812961	1743	ORF	highly similar to adenine deaminases	hypothetical protein - RAST_Product: Adenine deaminase (EC 3.5.4.2)	Adenine deaminase (EC 3.5.4.2)	Operon_306	Nucleotide transport and metabolism	TTG	 
lmo1743	1812978	1813436	459	-	1812978	1813436	459	ORF	lmo1743	hypothetical protein - RAST_Product: FIG00774678: hypothetical protein	FIG00774678: hypothetical protein	Operon_306	Not in COGs	ATG	 
lmo1744	1813457	1814332	876	-	1813457	1814332	876	ORF		hypothetical protein - RAST_Product: Isoflavone_redu, Isoflavone reductase	Isoflavone_redu, Isoflavone reductase	Operon_306	"Cell wall/membrane biogenesis; Carbohydrate transport and metabolism;"	ATG	 
lmo1745	1814403	1815080	678	-	1814403	1815080	678	ORF	similar to two-component response regulator	hypothetical protein - RAST_Product: Two-component response regulator YvcP	Two-component response regulator YvcP	Operon_306	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1746	1815143	1817122	1980	-	1815143	1817122	1980	ORF	similar to ABC transporter (permease)	hypothetical protein	Bacitracin export permease protein BceB	Operon_306	Defense/virulence mechanisms	ATG	 
lmo1747	1817112	1817879	768	-	1817112	1817879	768	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Bacitracin export ATP-binding protein BceA	Bacitracin export ATP-binding protein BceA	Operon_306	Defense/virulence mechanisms	ATG	 
lmo1748	1818007	1818516	510	-	1818007	1818516	510	ORF	lmo1748	hypothetical protein - RAST_Product: FIG00774793: hypothetical protein	FIG00774793: hypothetical protein		Not in COGs	ATG	 
lmo1749	1818740	1819213	474	+	1818740	1819213	474	ORF	similar to shikimate kinase	hypothetical protein - RAST_Product: Shikimate kinase I (EC 2.7.1.71)	Shikimate kinase I (EC 2.7.1.71)		Amino acid transport and metabolism	ATG	 
lmo1750	1819244	1819798	555	-	1819244	1819798	555	ORF		hypothetical protein - RAST_Product: Molybdate metabolism regulator	Molybdate metabolism regulator		Function unknown	ATG	 
lmo1751	1820133	1821494	1362	-	1820133	1821494	1362	ORF	Uncharacterized RNA methyltransferase lmo1751	hypothetical protein - RAST_Product: 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939	Operon_307	Translation	TTG	 
lmo1752	1821518	1822273	756	-	1821518	1822273	756	ORF	lmo1752	hypothetical protein - RAST_Product: FIG00774698: hypothetical protein	FIG00774698: hypothetical protein	Operon_307	Not in COGs	ATG	 
lmo1753	1822421	1823353	933	-	1822421	1823353	933	ORF	similar to YegS from E. coli	putative lipid kinase	Transcription regulator [contains diacylglycerol kinase catalytic domain]		"Lipid transport and metabolism; General function prediction only;"	ATG	 
lmo1754	1823494	1824924	1431	-	1823494	1824924	1431	ORF	"allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA"	aspartyl/glutamyl-tRNA amidotransferase subunit B	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Operon_308	Translation	ATG	 
lmo1755	1824936	1826387	1452	-	1824936	1826387	1452	ORF	"allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA"	aspartyl/glutamyl-tRNA amidotransferase subunit A	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Operon_308	Translation	TTG	 
lmo1756	1826411	1826704	294	-	1826411	1826704	294	ORF	"allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain"	aspartyl/glutamyl-tRNA amidotransferase subunit C	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Operon_308	Translation	TTG	 
lmo1757	1826829	1827944	1116	-	1826829	1827944	1116	ORF		hypothetical protein - RAST_Product: Putative pheromone cAM373 precursor lipoprotein CamS	Putative pheromone cAM373 precursor lipoprotein CamS	Operon_308	General function prediction only	ATG	 
lmo1758	1827941	1829956	2016	-	1827941	1829956	2016	ORF	"similar to DNA ligase; this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB"	NAD-dependent DNA ligase LigA	DNA ligase (EC 6.5.1.2)	Operon_308	Replication, recombination and repair	ATG	 
lmo1759	1829982	1832177	2196	-	1829982	1832177	2196	ORF		ATP-dependent DNA helicase	ATP-dependent DNA helicase UvrD/PcrA	Operon_308	Replication, recombination and repair	TTG	 
lmo1760	1832242	1832919	678	-	1832242	1832919	678	ORF	"PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer"	geranylgeranylglyceryl phosphate synthase-like protein	(S)-3-O-geranylgeranylglyceryl phosphate synthase		General function prediction only	ATG	 
lmo1761	1833125	1834480	1356	+	1833125	1834480	1356	ORF	similar to putative sodium-dependent transporter	hypothetical protein	sodium-dependent transporter		General function prediction only	ATG	 
lmo1762	1834523	1834777	255	-	1834523	1834777	255	ORF	lmo1762	hypothetical protein - RAST_Product: FIG00774163: hypothetical protein	FIG00774163: hypothetical protein	Operon_309	Not in COGs	TTG	 
lmo1763	1834795	1835091	297	-	1834795	1835091	297	ORF		hypothetical protein - RAST_Product: His repressor	His repressor	Operon_309	Function unknown	ATG	 
lmo1764	1835229	1836491	1263	-	1835229	1836491	1263	ORF	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis	phosphoribosylamine--glycine ligase	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1765	1836516	1838045	1530	-	1836516	1838045	1530	ORF	involved in de novo purine biosynthesis	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1766	1838051	1838617	567	-	1838051	1838617	567	ORF	highly similar to phosphoribosylglycinamide formyltransferases	hypothetical protein - RAST_Product: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1767	1838614	1839663	1050	-	1838614	1839663	1050	ORF	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis	phosphoribosylaminoimidazole synthetase	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1768	1839682	1841109	1428	-	1839682	1841109	1428	ORF	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway	amidophosphoribosyltransferase	Amidophosphoribosyltransferase (EC 2.4.2.14)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1769	1841094	1843313	2220	-	1841094	1843313	2220	ORF	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis	phosphoribosylformylglycinamidine synthase II	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1770	1843306	1843989	684	-	1843306	1843989	684	ORF	"similar to phosphoribosylformylglycinamidine synthetase II; catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis"	phosphoribosylformylglycinamidine synthase I	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1771	1843993	1844238	246	-	1843993	1844238	246	ORF	With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway	phosphoribosylformylglycinamidine synthase subunit PurS	Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1772	1844250	1844963	714	-	1844250	1844963	714	ORF	"catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase"	phosphoribosylaminoimidazole-succinocarboxamide synthase	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	Operon_310	Nucleotide transport and metabolism	GTG	 
lmo1773	1845044	1846336	1293	-	1845044	1846336	1293	ORF	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide	adenylosuccinate lyase	Adenylosuccinate lyase (EC 4.3.2.2)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1774	1846355	1847479	1125	-	1846355	1847479	1125	ORF	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway	phosphoribosylaminoimidazole carboxylase ATPase subunit	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)	Operon_310	Nucleotide transport and metabolism	TTG	 
lmo1775	1847472	1847960	489	-	1847472	1847960	489	ORF	Catalyzes a step in the de novo purine nucleotide biosynthetic pathway	phosphoribosylaminoimidazole carboxylase catalytic subunit	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	Operon_310	Nucleotide transport and metabolism	ATG	 
lmo1776	1848166	1848690	525	-	1848166	1848690	525	ORF		hypothetical protein - RAST_Product: FIG00774849: hypothetical protein	FIG00774849: hypothetical protein		Function unknown	GTG	 
lmo1777	1854077	1854682	606	-	1854077	1854682	606	ORF		hypothetical protein - RAST_Product: HD domain protein	HD domain protein		General function prediction only	ATG	 
lmo1778	1854748	1855521	774	+	1854748	1855521	774	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_311	Inorganic ion transport and metabolism	ATG	 
lmo1779	1855571	1855933	363	+	1855571	1855933	363	ORF	lmo1779	hypothetical protein - RAST_Product: FIG00774618: hypothetical protein	FIG00774618: hypothetical protein	Operon_311	Not in COGs	TTG	 
lmo1780	1855952	1857184	1233	-	1855952	1857184	1233	ORF	"similar to aminotripeptidase (peptidase T); catalyzes the release of the N-terminal amino acid from a tripeptide"	peptidase T	Tripeptide aminopeptidase (EC 3.4.11.4)		Amino acid transport and metabolism	ATG	 
lmo1781	1857242	1857772	531	-	1857242	1857772	531	ORF	lmo1781	hypothetical protein - RAST_Product: FIG00775101: hypothetical protein	FIG00775101: hypothetical protein		Function unknown	ATG	 
lmo1782	1857856	1858611	756	+	1857856	1858611	756	ORF	similar to 3'-exo-deoxyribonuclease exoA	hypothetical protein - RAST_Product: Exodeoxyribonuclease III (EC 3.1.11.2)	Exodeoxyribonuclease III (EC 3.1.11.2)		Replication, recombination and repair	GTG	 
lmo1783	1858651	1859010	360	-	1858651	1859010	360	ORF	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit	50S ribosomal protein L20	LSU ribosomal protein L20p	Operon_312	Translation	ATG	 
lmo1784	1859050	1859250	201	-	1859050	1859250	201	ORF		50S ribosomal protein L35	LSU ribosomal protein L35p	Operon_312	Translation	ATG	 
lmo1785	1859272	1859787	516	-	1859272	1859787	516	ORF	"IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits"	translation initiation factor IF-3	Translation initiation factor 3	Operon_312	Translation	ATT	 
lmo1786	1860200	1861090	891	-	1860200	1861090	891	ORF		internalin C	Internalin C		Defense/virulence mechanisms	TTG	 
lmo1787	1861907	1862251	345	-	1861907	1862251	345	ORF	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	50S ribosomal protein L19	LSU ribosomal protein L19p		Translation	ATG	 
lmo1788	1862459	1862893	435	+	1862459	1862893	435	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, MerR family	Transcriptional regulator, MerR family	Operon_313	Transcription	ATG	 
lmo1789	1862893	1863480	588	+	1862893	1863480	588	ORF	weakly similar to Nad(P)h Oxidoreductase chain B	hypothetical protein - RAST_Product: flavodoxin-like fold domain protein	flavodoxin-like fold domain protein	Operon_313	General function prediction only	ATG	 
lmo1790	1863501	1864217	717	+	1863501	1864217	717	ORF		hypothetical protein	metallo-beta-lactamase family protein	Operon_313	General function prediction only	ATG	 
lmo1791	1864248	1864637	390	-	1864248	1864637	390	ORF	lmo1791	hypothetical protein - RAST_Product: FIG00774452: hypothetical protein	FIG00774452: hypothetical protein	Operon_314	Not in COGs	ATG	 
lmo1792	1864657	1865394	738	-	1864657	1865394	738	ORF	"similar to E. coli tRNA (guanine-N1) methyltransferase; methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA"	tRNA (guanine-N(1)-)-methyltransferase	tRNA (guanine-N1)-methyltransferase( EC:2.1.1.31 )	Operon_314	Translation	ATG	 
lmo1793	1865394	1865912	519	-	1865394	1865912	519	ORF	"similar to putative 16S rRNA processing protein RimM; Essential for efficient processing of 16S rRNA"	16S rRNA-processing protein RimM	16S rRNA processing protein RimM	Operon_314	Translation	ATG	 
lmo1794	1865922	1866308	387	-	1865922	1866308	387	ORF		hypothetical protein - RAST_Product: FIG00774277: hypothetical protein	FIG00774277: hypothetical protein	Operon_314	Not in COGs	GTG	 
lmo1795	1866336	1867070	735	-	1866336	1867070	735	ORF		hypothetical protein - RAST_Product: Glutamine amidotransferase, class I	Glutamine amidotransferase, class I	Operon_314	General function prediction only	ATG	 
lmo1796	1867180	1867410	231	-	1867180	1867410	231	ORF		hypothetical protein - RAST_Product: KH domain RNA binding protein YlqC	KH domain RNA binding protein YlqC	Operon_315	General function prediction only	ATG	 
lmo1797	1867427	1867699	273	-	1867427	1867699	273	ORF	"binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity"	30S ribosomal protein S16	SSU ribosomal protein S16p	Operon_315	Translation	ATG	 
lmo1798	1867802	1869460	1659	-	1867802	1869460	1659	ORF		hypothetical protein - RAST_Product: poly (glycerol-phosphate) alpha-glucosyltransferase	poly (glycerol-phosphate) alpha-glucosyltransferase	Operon_316	Not in COGs	ATG	 
lmo1799	1869532	1872243	2712	-	1869532	1872243	2712	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo1799 homolog	Operon_316	Not in COGs	ATG	 
lmo1800	1872724	1873620	897	-	1872724	1873620	897	ORF	similar to protein-tyrosine phosphatase	hypothetical protein - RAST_Product: Protein tyrosine phosphatase (EC 3.1.3.48)	Protein tyrosine phosphatase (EC 3.1.3.48)		Signal transduction mechanisms	ATG	 
lmo1801	1873764	1875116	1353	-	1873764	1875116	1353	ORF	similar to signal recognition particle protein Ffh	hypothetical protein - RAST_Product: Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	Operon_317	Intracellular trafficking and secretion	ATG	 
lmo1802	1875129	1875461	333	-	1875129	1875461	333	ORF		putative DNA-binding protein	Signal recognition particle associated protein	Operon_317	Function unknown	TTG	 
lmo1803	1875574	1876560	987	-	1875574	1876560	987	ORF	similar to FtsY of E. coli and SRP receptor alpha-subunit	hypothetical protein - RAST_Product: Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	Operon_318	Intracellular trafficking and secretion	ATG	 
lmo1804	1876575	1880135	3561	-	1876575	1880135	3561	ORF	similar to Smc protein essential for chromosome condensation and partition	hypothetical protein - RAST_Product: Chromosome partition protein smc	Chromosome partition protein smc	Operon_318	Cell cycle control, mitosis and meiosis	ATG	 
lmo1805	1880158	1880847	690	-	1880158	1880847	690	ORF	"similar to ribonuclease III; cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity"	ribonuclease III	Ribonuclease III (EC 3.1.26.3)	Operon_318	Transcription	ATG	 
lmo1806	1881041	1881274	234	-	1881041	1881274	234	ORF	"highly similar to acyl carrier proteins; carries the fatty acid chain in fatty acid biosynthesis"	acyl carrier protein	Acyl carrier protein		"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism;"	ATG	 
lmo1807	1881381	1882124	744	-	1881381	1882124	744	ORF	similar to 3-ketoacyl-acyl carrier protein reductase	hypothetical protein - RAST_Product: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	Operon_319	"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo1808	1882128	1883069	942	-	1882128	1883069	942	ORF	similar to malonyl CoA-acyl carrier protein transacylase	acyl-carrier-protein S-malonyltransferase	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	Operon_319	Lipid transport and metabolism	ATG	 
lmo1809	1883062	1884075	1014	-	1883062	1884075	1014	ORF	"similar to plsX protein involved in fatty acid/phospholipid synthesis; involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY"	putative glycerol-3-phosphate acyltransferase PlsX	Phosphate:acyl-ACP acyltransferase PlsX	Operon_319	Lipid transport and metabolism	ATG	 
lmo1810	1884096	1884665	570	-	1884096	1884665	570	ORF	negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria	fatty acid biosynthesis transcriptional regulator	Phosphate:acyl-ACP acyltransferase PlsX	Operon_319	Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo1811	1884846	1886894	2049	-	1884846	1886894	2049	ORF	"similar to ATP-dependent DNA helicase recG; catalyzes branch migration in Holliday junction intermediates"	ATP-dependent DNA helicase RecG	ATP-dependent DNA helicase RecG (EC 3.6.1.-)	Operon_320	"Transcription; Replication, recombination and repair;"	GTG	 
lmo1812	1886887	1887777	891	-	1886887	1887777	891	ORF	similar to L-serine dehydratase	hypothetical protein - RAST_Product: L-serine dehydratase, alpha subunit (EC 4.3.1.17)	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	Operon_320	Amino acid transport and metabolism	ATG	 
lmo1813	1887913	1888575	663	-	1887913	1888575	663	ORF	similar to phosphoglycerate dehydrogenase	hypothetical protein	L-serine dehydratase, beta subunit (EC 4.3.1.17)	Operon_321	Amino acid transport and metabolism	GTG	 
lmo1814	1888615	1890273	1659	-	1888615	1890273	1659	ORF		hypothetical protein - RAST_Product: Dihydroxyacetone kinase family protein	Dihydroxyacetone kinase family protein	Operon_321	General function prediction only	GTG	 
lmo1815	1890288	1890653	366	-	1890288	1890653	366	ORF		hypothetical protein - RAST_Product: FIG001802: Putative alkaline-shock protein	FIG001802: Putative alkaline-shock protein	Operon_321	Function unknown	ATG	 
lmo1816	1890951	1891139	189	+	1890951	1891139	189	ORF	required for 70S ribosome assembly	50S ribosomal protein L28	LSU ribosomal protein L28p		Translation	ATG	 
lmo1817	1891236	1891880	645	-	1891236	1891880	645	ORF	weakly similar to thiamin pyrophosphokinase	hypothetical protein - RAST_Product: Thiamin pyrophosphokinase (EC 2.7.6.2)	Thiamin pyrophosphokinase (EC 2.7.6.2)	Operon_322	Coenzyme transport and metabolism	ATG	 
lmo1818	1891944	1892600	657	-	1891944	1892600	657	ORF	"similar to ribulose-5-phosphate 3-epimerase; catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate"	ribulose-phosphate 3-epimerase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	Operon_322	Carbohydrate transport and metabolism	ATG	 
lmo1819	1892603	1893478	876	-	1892603	1893478	876	ORF	"EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity"	ribosome-associated GTPase	Ribosome small subunit-stimulated GTPase EngC	Operon_322	General function prediction only	GTG	 
lmo1820	1893497	1895464	1968	-	1893497	1895464	1968	ORF	similar to putative serine/threonine-specific protein kinase	hypothetical protein - RAST_Product: Serine/threonine protein kinase PrkC, regulator of stationary phase	Serine/threonine protein kinase PrkC, regulator of stationary phase	Operon_322	"General function prediction only; Signal transduction mechanisms; Transcription; Replication, recombination and repair; Function unknown;"	ATG	 
lmo1821	1895461	1896219	759	-	1895461	1896219	759	ORF	similar to putative phosphoprotein phosphatase	hypothetical protein - RAST_Product: Protein serine/threonine phosphatase PrpC, regulation of stationary phase	Protein serine/threonine phosphatase PrpC, regulation of stationary phase	Operon_322	Signal transduction mechanisms	ATG	 
lmo1822	1896242	1897576	1335	-	1896242	1897576	1335	ORF	similar to RNA-binding Sun protein	hypothetical protein - RAST_Product: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)	Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)	Operon_322	Translation	ATG	 
lmo1823	1897577	1898515	939	-	1897577	1898515	939	ORF	similar to methionyl-tRNA formyltransferase	hypothetical protein - RAST_Product: Methionyl-tRNA formyltransferase (EC 2.1.2.9)	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	Operon_322	Translation	ATG	 
lmo1824	1898529	1900922	2394	-	1898529	1900922	2394	ORF	"similar to primosomal replication factor Y; binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity"	primosome assembly protein PriA	Helicase PriA essential for oriC/DnaA-independent DNA replication	Operon_322	Replication, recombination and repair	ATG	 
lmo1825	1900927	1902126	1200	-	1900927	1902126	1200	ORF	similar to pantothenate metabolism flavoprotein homolog	hypothetical protein - RAST_Product: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	Operon_322	Coenzyme transport and metabolism	ATG	 
lmo1826	1902281	1902484	204	-	1902281	1902484	204	ORF	"lmo1826; Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits"	DNA-directed RNA polymerase subunit omega	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	Operon_323	Transcription	ATG	 
lmo1827	1902484	1903101	618	-	1902484	1903101	618	ORF	"similar to guanylate kinases; Essential for recycling GMP and indirectly, cGMP"	guanylate kinase	Guanylate kinase (EC 2.7.4.8)	Operon_323	Nucleotide transport and metabolism	ATG	 
lmo1828	1903120	1903995	876	-	1903120	1903995	876	ORF	similar to conserved hypothetical protein	hypothetical protein - RAST_Product: Protein YicC	Protein YicC	Operon_323	Function unknown	ATG	 
lmo1829	1904152	1905864	1713	+	1904152	1905864	1713	ORF	similar to fibronectin binding proteins	hypothetical protein - RAST_Product: Fibronectin/fibrinogen-binding protein	Fibronectin/fibrinogen-binding protein		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1830	1905952	1906551	600	+	1905952	1906551	600	ORF	similar to conserved hypotheticl proteins	short chain dehydrogenase	short chain dehydrogenase		"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo1831	1906592	1907221	630	-	1906592	1907221	630	ORF	"highly similar to orotate phosphoribosyltransferases; involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate"	orotate phosphoribosyltransferase	Orotate phosphoribosyltransferase (EC 2.4.2.10)	Operon_324	Nucleotide transport and metabolism	ATG	 
lmo1832	1907218	1907919	702	-	1907218	1907919	702	ORF	"highly similar to orotidine 5'-phosphate decarboxylases; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase"	orotidine 5'-phosphate decarboxylase	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Operon_324	Nucleotide transport and metabolism	ATG	 
lmo1833	1907916	1908830	915	-	1907916	1908830	915	ORF	"highly similar to dihydroorotase dehydrogenase; catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits"	dihydroorotate dehydrogenase 1B	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	Operon_324	Nucleotide transport and metabolism	ATG	 
lmo1834	1908827	1909591	765	-	1908827	1909591	765	ORF	highly similar to dihydroorotate dehydrogenase (electron transfer subunit)	hypothetical protein - RAST_Product: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	Operon_324	"Coenzyme transport and metabolism; Energy production and conversion;"	GTG	 
lmo1835	1909614	1912826	3213	-	1909614	1912826	3213	ORF	"highly similar to carbamoyl-phosphate synthetase (catalytic subunit); four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity"	carbamoyl phosphate synthase large subunit	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Operon_324	"Amino acid transport and metabolism; Nucleotide transport and metabolism;"	ATG	 
lmo1836	1912819	1913910	1092	-	1912819	1913910	1092	ORF	"highly similar to carbamoyl-phosphate synthetase (glutaminase subunit); catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers"	carbamoyl phosphate synthase small subunit	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Operon_324	"Amino acid transport and metabolism; Nucleotide transport and metabolism;"	ATG	 
lmo1837	1913907	1915187	1281	-	1913907	1915187	1281	ORF	"highly similar to dihydroorotase; catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis"	dihydroorotase	Dihydroorotase (EC 3.5.2.3)	Operon_324	Nucleotide transport and metabolism	ATG	 
lmo1838	1915175	1916086	912	-	1915175	1916086	912	ORF	"highly similar to aspartate carbamoyltransferase; catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis"	aspartate carbamoyltransferase catalytic subunit	Aspartate carbamoyltransferase (EC 2.1.3.2)	Operon_324	Nucleotide transport and metabolism	ATG	 
lmo1839	1916166	1917452	1287	-	1916166	1917452	1287	ORF	highly similar to uracil permease	hypothetical protein - RAST_Product: Uracil permease	Uracil permease	Operon_324	Nucleotide transport and metabolism	ATG	 
lmo1840	1917581	1918132	552	-	1917581	1918132	552	ORF	"highly similar to pyrimidine operon regulatory protein; regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity"	bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR	Operon_324	Nucleotide transport and metabolism	ATG	 
lmo1841	1918363	1918593	231	+	1918363	1918593	231	ORF	lmo1841	hypothetical protein - RAST_Product: FIG00774989: hypothetical protein	FIG00774989: hypothetical protein		Not in COGs	ATG	 
lmo1842	1918681	1919505	825	+	1918681	1919505	825	ORF		hypothetical protein - RAST_Product: STAS domain protein	STAS domain protein		Signal transduction mechanisms	ATG	 
lmo1843	1919525	1920436	912	-	1919525	1920436	912	ORF		hypothetical protein - RAST_Product: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	Operon_325	Translation	ATG	 
lmo1844	1920436	1920900	465	-	1920436	1920900	465	ORF	"highly similar to signal peptidase II; lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis"	lipoprotein signal peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	Operon_325	Cell wall/membrane biogenesis	ATG	 
lmo1845	1920982	1922265	1284	-	1920982	1922265	1284	ORF		hypothetical protein - RAST_Product: xanthine/uracil permease family protein	xanthine/uracil permease family protein	Operon_325	General function prediction only	ATG	 
lmo1846	1922439	1923809	1371	+	1922439	1923809	1371	ORF	"Probable multidrug resistance protein norM (Multidrug-efflux transporter); NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones"	multidrug efflux protein	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps		Defense/virulence mechanisms	TTG	 
lmo1847	1923825	1924757	933	-	1923825	1924757	933	ORF	similar to adhesion binding proteins and lipoproteins with multiple specificity for metal cations (ABC transporter)	hypothetical protein - RAST_Product: Manganese ABC transporter, periplasmic-binding protein SitA	Manganese ABC transporter, periplasmic-binding protein SitA	Operon_326	Cell wall/membrane biogenesis	ATG	 
lmo1848	1924754	1925596	843	-	1924754	1925596	843	ORF	similar metal cations ABC transporter (permease protein)	hypothetical protein - RAST_Product: Manganese ABC transporter, inner membrane permease protein SitD	Manganese ABC transporter, inner membrane permease protein SitD	Operon_326	Inorganic ion transport and metabolism	TTG	 
lmo1849	1925600	1926322	723	-	1925600	1926322	723	ORF	similar to metal cations ABC transporter, ATP-binding proteins	hypothetical protein - RAST_Product: Manganese ABC transporter, ATP-binding protein SitB	Manganese ABC transporter, ATP-binding protein SitB	Operon_326	Inorganic ion transport and metabolism	ATG	 
lmo1850	1926482	1926898	417	-	1926482	1926898	417	ORF	similar to transcriptional regulator (MarR family)	hypothetical protein - RAST_Product: Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Operon_327	Transcription	ATG	 
lmo1851	1926935	1928425	1491	-	1926935	1928425	1491	ORF	similar to carboxy-terminal processing proteinase	hypothetical protein - RAST_Product: Carboxyl-terminal protease (EC 3.4.21.102)	Carboxyl-terminal protease (EC 3.4.21.102)	Operon_327	Cell wall/membrane biogenesis	ATG	 
lmo1852	1928579	1928785	207	-	1928579	1928785	207	ORF	similar to putative mercuric ion binding proteins	hypothetical protein - RAST_Product: Copper chaperone	Copper chaperone	Operon_328	Inorganic ion transport and metabolism	ATG	 
lmo1853	1928798	1931011	2214	-	1928798	1931011	2214	ORF	similar to heavy metal-transporting ATPases	"hypothetical protein - RAST_Product: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)"	"Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)"	Operon_328	Inorganic ion transport and metabolism	ATG	 
lmo1854	1931026	1931319	294	-	1931026	1931319	294	ORF		hypothetical protein - RAST_Product: FIG00774268: hypothetical protein	FIG00774268: hypothetical protein	Operon_328	Function unknown	ATG	 
lmo1855	1931442	1932266	825	-	1931442	1932266	825	ORF	similar to similar to D-alanyl-D-alanine carboxypeptidases	hypothetical protein - RAST_Product: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	Operon_329	Cell wall/membrane biogenesis	ATG	 
lmo1856	1932324	1933025	702	-	1932324	1933025	702	ORF	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate	purine nucleoside phosphorylase	Purine nucleoside phosphorylase (EC 2.4.2.1)	Operon_329	Nucleotide transport and metabolism	ATG	 
lmo1857	1933037	1933270	234	-	1933037	1933270	234	ORF	similar to hypoyhetical protein	hypothetical protein - RAST_Product: FIG00774446: hypothetical protein	FIG00774446: hypothetical protein	Operon_329	Function unknown	TTG	 
lmo1858	1933333	1934238	906	-	1933333	1934238	906	ORF	similar to dehydogenases and hypothetical proteins	hypothetical protein - RAST_Product: oxidoreductase, Gfo/Idh/MocA family	oxidoreductase, Gfo/Idh/MocA family	Operon_330	General function prediction only	ATG	 
lmo1859	1934321	1934758	438	-	1934321	1934758	438	ORF	"similar to transcriptional regulator (PilB family); this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress"	methionine sulfoxide reductase B	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	Operon_330	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1860	1934765	1935298	534	-	1934765	1935298	534	ORF	"similar to peptidyl methionine sulfoxide reductases; this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress"	methionine sulfoxide reductase A	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	Operon_330	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo1861	1935334	1935948	615	-	1935334	1935948	615	ORF		hypothetical protein - RAST_Product: YfaA	YfaA	Operon_330	Function unknown	GTG	 
lmo1862	1935964	1936749	786	-	1935964	1936749	786	ORF		hypothetical protein - RAST_Product: FIG006988: Lipase/Acylhydrolase with GDSL-like motif	FIG006988: Lipase/Acylhydrolase with GDSL-like motif	Operon_330	Amino acid transport and metabolism	ATG	 
lmo1863	1936764	1937603	840	-	1936764	1937603	840	ORF		hypothetical protein - RAST_Product: Hypothetical protein DUF194, DegV family	Hypothetical protein DUF194, DegV family	Operon_330	Function unknown	ATG	 
lmo1864	1937783	1938415	633	+	1937783	1938415	633	ORF	similar to hemolysinIII proteins, putative integral membrane protein	hypothetical protein - RAST_Product: COG1272: Predicted membrane protein hemolysin III homolog	COG1272: Predicted membrane protein hemolysin III homolog		General function prediction only	ATG	 
lmo1865	1938538	1939155	618	+	1938538	1939155	618	ORF		hypothetical protein - RAST_Product: CBS domain protein, lmo1865 homolog	CBS domain protein, lmo1865 homolog	Operon_331	General function prediction only	GTG	 
lmo1866	1939168	1939980	813	+	1939168	1939980	813	ORF		hypothetical protein - RAST_Product: ATP/GTP-binding protein, SA1392 homolog	ATP/GTP-binding protein, SA1392 homolog	Operon_331	Function unknown	ATG	 
lmo1867	1939999	1942638	2640	+	1939999	1942638	2640	ORF	"similar to pyruvate phosphate dikinase; catalyzes the formation of phosphoenolpyruvate from pyruvate"	pyruvate phosphate dikinase	Pyruvate,phosphate dikinase (EC 2.7.9.1)	Operon_331	Carbohydrate transport and metabolism	GTG	 
lmo1868	1942687	1943064	378	-	1942687	1943064	378	ORF		hypothetical protein - RAST_Product: Lactoylglutathione lyase	Lactoylglutathione lyase	Operon_332	Amino acid transport and metabolism	ATG	 
lmo1869	1943068	1944051	984	-	1943068	1944051	984	ORF	similar to conserved hypothetical proteins, putative integral membrane protein	hypothetical protein - RAST_Product: FIG00774701: hypothetical protein	FIG00774701: hypothetical protein	Operon_332	Function unknown	ATG	 
lmo1870	1944145	1944768	624	-	1944145	1944768	624	ORF	similar to alkaline phosphatase	hypothetical protein - RAST_Product: FIG00774911: hypothetical protein	FIG00774911: hypothetical protein		Function unknown	TTG	 
lmo1871	1944908	1946419	1512	-	1944908	1946419	1512	ORF	similar to phosphoglucomutases	hypothetical protein - RAST_Product: Phosphoglucosamine mutase (EC 5.4.2.10)	Phosphoglucosamine mutase (EC 5.4.2.10)		Carbohydrate transport and metabolism	ATG	 
lmo1872	1946488	1947363	876	-	1946488	1947363	876	ORF	similar to methyltransferases	hypothetical protein - RAST_Product: Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)	Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51)		"Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	TTG	 
lmo1873	1947416	1947898	483	-	1947416	1947898	483	ORF	similar to dihydrofolate reductases	hypothetical protein - RAST_Product: Dihydrofolate reductase (EC 1.5.1.3)	Dihydrofolate reductase (EC 1.5.1.3)	Operon_333	Coenzyme transport and metabolism	ATG	 
lmo1874	1947914	1948858	945	-	1947914	1948858	945	ORF	"similar to thymidylate synthase; ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived"	thymidylate synthase	Thymidylate synthase (EC 2.1.1.45)	Operon_333	Nucleotide transport and metabolism	ATG	 
lmo1875	1948871	1950763	1893	-	1948871	1950763	1893	ORF	similar to putative ABC transporters (ATP-binding protein)	hypothetical protein - RAST_Product: COG0488: ATPase components of ABC transporters with duplicated ATPase domains	COG0488: ATPase components of ABC transporters with duplicated ATPase domains	Operon_333	General function prediction only	ATG	 
lmo1877	1951284	1952564	1281	-	1951284	1952564	1281	ORF	similar to formyl-tetrahydrofolate synthetase N-terminal part	hypothetical protein - RAST_Product: Formate--tetrahydrofolate ligase (EC 6.3.4.3)	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	Operon_334	Nucleotide transport and metabolism	ATG	 
lmo1878	1952721	1953149	429	-	1952721	1953149	429	ORF	"similar o transcriptional regulators; involved in manganese homeostasis; activates the transcription of the mntABCD operon"	manganese transport transcriptional regulator	Mn-dependent transcriptional regulator MntR	Operon_334	Transcription	ATG	 
lmo1879	1953513	1953713	201	+	1953513	1953713	201	ORF	similar to cold shock protein	hypothetical protein - RAST_Product: Cold shock protein CspB	Cold shock protein CspB		Transcription	ATG	 
lmo1880	1953836	1954237	402	+	1953836	1954237	402	ORF	similar to similar to RNase HI	hypothetical protein - RAST_Product: RNase H	RNase H		Replication, recombination and repair	ATG	 
lmo1881	1954255	1955127	873	-	1954255	1955127	873	ORF	similar to 5'-3' exonuclease	hypothetical protein - RAST_Product: DNA polymerase I (EC 2.7.7.7)	DNA polymerase I (EC 2.7.7.7)		Replication, recombination and repair	ATG	 
lmo1882	1955205	1955474	270	-	1955205	1955474	270	ORF	"similar to ribosomal protein S14; located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif"	30S ribosomal protein S14	SSU ribosomal protein S14p (S29e)		Translation	ATG	 
lmo1883	1955598	1956656	1059	-	1955598	1956656	1059	ORF	similar to chitinases	hypothetical protein - RAST_Product: Chitinase (EC 3.2.1.14)	Chitinase (EC 3.2.1.14)		Carbohydrate transport and metabolism	ATG	 
lmo1884	1956848	1958155	1308	-	1956848	1958155	1308	ORF	similar to xanthine permeases	hypothetical protein - RAST_Product: Xanthine permease	Xanthine permease	Operon_335	Nucleotide transport and metabolism	ATG	 
lmo1885	1958162	1958740	579	-	1958162	1958740	579	ORF	"similar to xanthine phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine"	xanthine phosphoribosyltransferase	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	Operon_335	Nucleotide transport and metabolism	TTG	 
lmo1886	1958968	1960476	1509	-	1958968	1960476	1509	ORF	similar to probable thermostable carboxypeptidases	hypothetical protein - RAST_Product: Thermostable carboxypeptidase 1 (EC 3.4.17.19)	Thermostable carboxypeptidase 1 (EC 3.4.17.19)	Operon_336	Amino acid transport and metabolism	TTG	 
lmo1887	1960496	1961644	1149	-	1960496	1961644	1149	ORF		hypothetical protein - RAST_Product: FIG001721: Predicted N6-adenine-specific DNA methylase	FIG001721: Predicted N6-adenine-specific DNA methylase	Operon_336	Replication, recombination and repair	ATG	 
lmo1888	1962225	1962566	342	-	1962225	1962566	342	ORF		hypothetical protein - RAST_Product: Cell division protein GpsB, coordinates the switch between cylindrical and septal cell wall synthesis by re-localization of PBP1	Cell division protein GpsB, coordinates the switch between cylindrical and septal cell wall synthesis by re-localization of PBP1		Cell cycle control, mitosis and meiosis	ATG	 
lmo1889	1962698	1963243	546	-	1962698	1963243	546	ORF		hypothetical protein - RAST_Product: FIG005686: hypothetical protein	FIG005686: hypothetical protein	Operon_337	Function unknown	GTG	 
lmo1890	1963240	1963605	366	-	1963240	1963605	366	ORF		hypothetical protein - RAST_Product: hyothetical protein	hyothetical protein	Operon_337	Not in COGs	ATG	 
lmo1891	1963852	1964457	606	+	1963852	1964457	606	ORF	"similar to DNA repair and homologous recombination protein; functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC"	Holliday junction-specific endonuclease	Recombination protein RecU	Operon_338	General function prediction only	ATG	 
lmo1892	1964489	1966972	2484	+	1964489	1966972	2484	ORF	similar to penicillin-binding protein 2A	hypothetical protein - RAST_Product: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) / Penicillin-binding protein 1A/1B (PBP1)	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) / Penicillin-binding protein 1A/1B (PBP1)	Operon_338	Cell wall/membrane biogenesis	ATG	 
lmo1893	1967015	1967506	492	-	1967015	1967506	492	ORF	lmo1893	hypothetical protein - RAST_Product: Hypothetical protein in cluster with penicillin-binding protein PBP1, Listerial type	Hypothetical protein in cluster with penicillin-binding protein PBP1, Listerial type	Operon_339	Not in COGs	ATG	 
lmo1894	1967499	1968158	660	-	1967499	1968158	660	ORF		endonuclease III (DNA repair)	Endonuclease III (EC 4.2.99.18)	Operon_339	Replication, recombination and repair	TTG	 
lmo1895	1968169	1968888	720	-	1968169	1968888	720	ORF	similar to chromosome replication initiation protein	hypothetical protein - RAST_Product: Chromosome replication initiation protein dnaD	Chromosome replication initiation protein dnaD	Operon_339	Replication, recombination and repair	ATG	 
lmo1896	1969037	1970329	1293	-	1969037	1970329	1293	ORF	"similar to asparaginyl-tRNA synthetases; catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA"	asparaginyl-tRNA synthetase	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	Operon_340	Translation	GTG	 
lmo1897	1970343	1971524	1182	-	1970343	1971524	1182	ORF	"similar to aspartate aminotransferases; catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate"	aspartate aminotransferase	Aspartate aminotransferase (EC 2.6.1.1)	Operon_340	Amino acid transport and metabolism	ATG	 
lmo1898	1971547	1972131	585	-	1971547	1972131	585	ORF		hypothetical protein - RAST_Product: hyothetical protein	hyothetical protein	Operon_340	Function unknown	ATG	 
lmo1899	1972176	1974962	2787	-	1972176	1974962	2787	ORF	"similar to ATP-dependent helicases; unwinds DNA"	bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon	DinG family ATP-dependent helicase YoaA		"Transcription; Replication, recombination and repair;"	ATG	 
lmo1900	1975059	1975442	384	-	1975059	1975442	384	ORF	"similar to aspartate 1-decarboxylases; Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)"	aspartate alpha-decarboxylase	Aspartate 1-decarboxylase (EC 4.1.1.11)	Operon_341	Coenzyme transport and metabolism	ATG	 
lmo1901	1975446	1976303	858	-	1975446	1976303	858	ORF	"similar to panthotenate synthetases; catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine"	pantoate--beta-alanine ligase	Pantoate--beta-alanine ligase (EC 6.3.2.1)	Operon_341	Coenzyme transport and metabolism	ATG	 
lmo1902	1976307	1977140	834	-	1976307	1977140	834	ORF	"similar to ketopantoate hydroxymethyltransferases; catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate"	3-methyl-2-oxobutanoate hydroxymethyltransferase	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	Operon_341	Coenzyme transport and metabolism	ATG	 
lmo1903	1977307	1977780	474	-	1977307	1977780	474	ORF	similar to thioredoxin	hypothetical protein - RAST_Product: bacteriocin transport accessory protein	bacteriocin transport accessory protein		"Posttranslational modification, protein turnover, chaperones; Energy production and conversion;"	ATG	 
lmo1904	1977928	1978905	978	-	1977928	1978905	978	ORF	similar to transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase	hypothetical protein - RAST_Product: Biotin-protein ligase (EC 6.3.4.15) / Biotin operon repressor	Biotin-protein ligase (EC 6.3.4.15) / Biotin operon repressor	Operon_342	"Transcription; Coenzyme transport and metabolism;"	ATG	 
lmo1905	1978895	1980076	1182	-	1978895	1980076	1182	ORF	"similar to tRNA CCA-adding enzyme; catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity"	tRNA CCA-pyrophosphorylase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	Operon_342	Translation	ATG	 
lmo1906	1980091	1980495	405	-	1980091	1980495	405	ORF	"similar to methylglyoxal synthase; catalyzes the formation of methylglyoxal from glycerone phosphate"	methylglyoxal synthase	Methylglyoxal synthase (EC 4.2.3.3)	Operon_342	Carbohydrate transport and metabolism	ATG	 
lmo1907	1980511	1981302	792	-	1980511	1981302	792	ORF	"similar to dihydrodipicolinate reductase; catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis"	dihydrodipicolinate reductase	Dihydrodipicolinate reductase (EC 1.3.1.26)	Operon_342	Amino acid transport and metabolism	ATG	 
lmo1908	1981299	1981634	336	-	1981299	1981634	336	ORF		hypothetical protein - RAST_Product: MazG nucleotide pyrophosphohydrolase	MazG nucleotide pyrophosphohydrolase	Operon_342	General function prediction only	ATG	 
lmo1909	1981774	1982640	867	+	1981774	1982640	867	ORF		hypothetical protein - RAST_Product: hypothetical protein BH3604	hypothetical protein BH3604		Function unknown	ATG	 
lmo1910	1982630	1983736	1107	-	1982630	1983736	1107	ORF	similar to oxidoreductases	hypothetical protein - RAST_Product: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)	D-amino acid dehydrogenase small subunit (EC 1.4.99.1)		Amino acid transport and metabolism	ATG	 
lmo1911	1984056	1985192	1137	+	1984056	1985192	1137	ORF	similar to unknown proteins (hypothetical sensory transduction histidine kinase)	hypothetical protein - RAST_Product: GGDEF domain protein	GGDEF domain protein	Operon_343	Signal transduction mechanisms	ATG	 
lmo1912	1985218	1986345	1128	+	1985218	1986345	1128	ORF	similar to unknown proteins (hypothetical sensory transduction histidine kinase)	hypothetical protein - RAST_Product: GGDEF domain protein	GGDEF domain protein	Operon_343	Signal transduction mechanisms	TTG	 
lmo1913	1986342	1987346	1005	+	1986342	1987346	1005	ORF		hypothetical protein - RAST_Product: Lmo1913 protein	Lmo1913 protein	Operon_343	Not in COGs	ATG	 
lmo1914	1987365	1988048	684	+	1987365	1988048	684	ORF		hypothetical protein - RAST_Product: EAL domain protein	EAL domain protein	Operon_343	Signal transduction mechanisms	ATG	 
lmo1915	1988159	1989802	1644	+	1988159	1989802	1644	ORF	"similar to malolactic enzyme (malate dehydrogenase); malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate"	malate dehydrogenase	NAD-dependent malic enzyme (EC 1.1.1.38)	Operon_344	Energy production and conversion	ATG	 
lmo1916	1989805	1990812	1008	+	1989805	1990812	1008	ORF	similar to peptidase	hypothetical protein - RAST_Product: putative esterase	putative esterase	Operon_344	Defense/virulence mechanisms	ATG	 
lmo1917	1991047	1993326	2280	+	1991047	1993326	2280	ORF	similar to pyruvate formate-lyase	hypothetical protein - RAST_Product: Pyruvate formate-lyase (EC 2.3.1.54)	Pyruvate formate-lyase (EC 2.3.1.54)		Energy production and conversion	ATG	 
lmo1918	1993372	1994637	1266	-	1993372	1994637	1266	ORF		hypothetical protein - RAST_Product: NAD(FAD)-utilizing dehydrogenases	NAD(FAD)-utilizing dehydrogenases		General function prediction only	ATG	 
lmo1919	1994751	1995434	684	-	1994751	1995434	684	ORF		hypothetical protein - RAST_Product: probable metal-dependent peptidase	probable metal-dependent peptidase		General function prediction only	ATG	 
lmo1920	1995520	1996116	597	-	1995520	1996116	597	ORF		hypothetical protein - RAST_Product: Hypothetical transmembrane protein CDS_ID OB1773	Hypothetical transmembrane protein CDS_ID OB1773		Function unknown	TTG	 
lmo1921	1996204	1996749	546	-	1996204	1996749	546	ORF		hypothetical protein - RAST_Product: BH1670 unknown conserved protein in B. subtilis	BH1670 unknown conserved protein in B. subtilis	Operon_345	Function unknown	ATG	 
lmo1922	1996784	1998037	1254	-	1996784	1998037	1254	ORF		hypothetical protein	TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase	Operon_345	General function prediction only	ATG	 
lmo1923	1998168	1999454	1287	-	1998168	1999454	1287	ORF	"similar to 5-enolpyruvylshikimate-3-phosphate synthase; catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis"	3-phosphoshikimate 1-carboxyvinyltransferase	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	Operon_346	Amino acid transport and metabolism	ATG	 
lmo1924	1999468	2000571	1104	-	1999468	2000571	1104	ORF	"similar to prephenate dehydrogenase; catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate"	prephenate dehydrogenase	Prephenate dehydrogenase (EC 1.3.1.12)	Operon_346	Amino acid transport and metabolism	ATG	 
lmo1925	2000592	2001674	1083	-	2000592	2001674	1083	ORF	"similar to histidinol-phosphate aminotransferase and tyrosine/phenylalanine aminotransferase; catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis"	histidinol-phosphate aminotransferase	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9)	Operon_346	Amino acid transport and metabolism	ATG	 
lmo1926	2001674	2002048	375	-	2001674	2002048	375	ORF	similar to chorismate mutase	hypothetical protein - RAST_Product: Chorismate mutase II (EC 5.4.99.5)	Chorismate mutase II (EC 5.4.99.5)	Operon_346	Amino acid transport and metabolism	TTG	 
lmo1927	2002045	2003142	1098	-	2002045	2003142	1098	ORF	"similar to 3-dehydroquinate synthase; catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis"	3-dehydroquinate synthase	3-dehydroquinate synthase (EC 4.2.3.4)	Operon_346	Amino acid transport and metabolism	ATG	 
lmo1928	2003145	2004311	1167	-	2003145	2004311	1167	ORF	"similar to chorismate synthase; catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis"	chorismate synthase	Chorismate synthase (EC 4.2.3.5)	Operon_346	Amino acid transport and metabolism	ATG	 
lmo1929	2004515	2004958	444	-	2004515	2004958	444	ORF	"similar to nucleoside diphosphate kinase; catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate"	nucleoside diphosphate kinase	Nucleoside diphosphate kinase (EC 2.7.4.6)	Operon_347	Nucleotide transport and metabolism	ATG	 
lmo1930	2004977	2005942	966	-	2004977	2005942	966	ORF	similar to heptaprenyl diphosphate synthase component II (menaquinone biosynthesis)	hypothetical protein - RAST_Product: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)	Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)	Operon_347	Coenzyme transport and metabolism	ATG	 
lmo1931	2005953	2006666	714	-	2005953	2006666	714	ORF	"similar to 2-heptaprenyl-1,4-naphthoquinone methyltransferase; Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone"	ubiquinone/menaquinone biosynthesis methyltransferase	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	Operon_347	Coenzyme transport and metabolism	ATG	 
lmo1932	2006689	2007456	768	-	2006689	2007456	768	ORF	similar to heptaprenyl diphosphate synthase component I	hypothetical protein - RAST_Product: Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	Operon_347	Not in COGs	ATG	 
lmo1933	2007515	2008084	570	-	2007515	2008084	570	ORF	"similar to GTP cyclohydrolase I; involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer"	GTP cyclohydrolase I	GTP cyclohydrolase I (EC 3.5.4.16) type 1	Operon_347	Coenzyme transport and metabolism	ATG	 
lmo1934	2008319	2008594	276	-	2008319	2008594	276	ORF	similar to non-specific DNA-binding protein HU	hypothetical protein - RAST_Product: DNA-binding protein HBsu	DNA-binding protein HBsu		Replication, recombination and repair	ATG	 
lmo1935	2009006	2009986	981	-	2009006	2009986	981	ORF	similar to protein-tyrosine/serine phosphatase	hypothetical protein - RAST_Product: Protein tyrosine phosphatase (EC 3.1.3.48)	Protein tyrosine phosphatase (EC 3.1.3.48)		Signal transduction mechanisms	ATG	 
lmo1936	2010089	2011105	1017	-	2010089	2011105	1017	ORF	"similar to NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate"	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	Operon_348	Energy production and conversion	ATG	 
lmo1937	2011128	2012438	1311	-	2011128	2012438	1311	ORF	"EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains"	GTP-binding protein EngA	GTP-binding protein EngA	Operon_348	General function prediction only	ATG	 
lmo1938	2012582	2013727	1146	-	2012582	2013727	1146	ORF	"similar to similar to ribosomal protein S1 like protein; in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins"	30S ribosomal protein S1	SSU ribosomal protein S1p		Translation	ATG	 
lmo1939	2014086	2014760	675	-	2014086	2014760	675	ORF	"similar to cytidylate kinase; Catalyzes the formation of (d)CDP from ATP and (d)CMP"	cytidylate kinase	Cytidylate kinase (EC 2.7.4.14)	Operon_349	Nucleotide transport and metabolism	ATG	 
lmo1940	2014776	2015738	963	-	2014776	2015738	963	ORF	similar to asparaginase	hypothetical protein - RAST_Product: L-asparaginase (EC 3.5.1.1)	L-asparaginase (EC 3.5.1.1)	Operon_349	"Amino acid transport and metabolism; Translation;"	ATG	 
lmo1941	2015819	2016538	720	-	2015819	2016538	720	ORF		hypothetical protein - RAST_Product: FIG00774028: hypothetical protein	FIG00774028: hypothetical protein	Operon_349	Cell wall/membrane biogenesis	GTG	 
lmo1942	2016858	2018261	1404	-	2016858	2018261	1404	ORF	similar to ATP-dependent DNA helicase	hypothetical protein - RAST_Product: ATP-dependent DNA helicase, RecQ family	ATP-dependent DNA helicase, RecQ family	Operon_350	Replication, recombination and repair	GTG	 
lmo1943	2018258	2019265	1008	-	2018258	2019265	1008	ORF		hypothetical protein - RAST_Product: hypothetical protein YpbB	hypothetical protein YpbB	Operon_350	Function unknown	TTG	 
lmo1944	2019420	2019644	225	+	2019420	2019644	225	ORF	similar to ferredoxin	hypothetical protein - RAST_Product: Ferredoxin	Ferredoxin		Energy production and conversion	TTG	 
lmo1945	2019686	2020297	612	-	2019686	2020297	612	ORF		hypothetical protein - RAST_Product: Substrate-specific component RibU of riboflavin ECF transporter	Substrate-specific component RibU of riboflavin ECF transporter		Function unknown	ATG	 
lmo1946	2020738	2021256	519	-	2020738	2021256	519	ORF	similar to similar to acyl-CoA hydrolase	hypothetical protein	Acyl-CoA hydrolase (EC 3.1.2.20)	Operon_351	Lipid transport and metabolism	ATG	 
lmo1947	2021272	2023062	1791	-	2021272	2023062	1791	ORF	similar to two-component sensor histidine kinase (ResE)	hypothetical protein - RAST_Product: Sensor histidine kinase ResE (EC 2.7.3.-)	Sensor histidine kinase ResE (EC 2.7.3.-)	Operon_351	Signal transduction mechanisms	ATG	 
lmo1948	2023163	2023879	717	-	2023163	2023879	717	ORF	similar to two-component response regulator (ResD)	hypothetical protein - RAST_Product: DNA-binding response regulator ResD	DNA-binding response regulator ResD	Operon_351	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo1949	2024062	2024796	735	-	2024062	2024796	735	ORF		hypothetical protein - RAST_Product: ribosomal large subunit pseudouridine synthase B( EC:4.2.1.70 )	ribosomal large subunit pseudouridine synthase B( EC:4.2.1.70 )	Operon_351	Translation	ATG	 
lmo1950	2024799	2025395	597	-	2024799	2025395	597	ORF		hypothetical protein - RAST_Product: Segregation and condensation protein B	Segregation and condensation protein B	Operon_351	Transcription	GTG	 
lmo1951	2025392	2026141	750	-	2025392	2026141	750	ORF	"functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB"	segregation and condensation protein A	Segregation and condensation protein A	Operon_351	Function unknown	ATG	 
lmo1952	2026157	2027467	1311	-	2026157	2027467	1311	ORF	similar to diaminopimelate decarboxylase	hypothetical protein - RAST_Product: Diaminopimelate decarboxylase (EC 4.1.1.20)	Diaminopimelate decarboxylase (EC 4.1.1.20)	Operon_351	Amino acid transport and metabolism	GTG	 
lmo1953	2027648	2028466	819	-	2027648	2028466	819	ORF	"similar to purine-nucleoside phosphorylase; catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation"	purine nucleoside phosphorylase	"Purine nucleoside phosphorylase (EC 2.4.2.1); N-Ribosylnicotinamide phosphorylase (EC 2.4.2.1) ## possible"	Operon_352	Nucleotide transport and metabolism	ATG	 
lmo1954	2028485	2029669	1185	-	2028485	2029669	1185	ORF	"similar to phosphopentomutase; catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose"	phosphopentomutase	Phosphopentomutase (EC 5.4.2.7)	Operon_352	Carbohydrate transport and metabolism	ATG	 
lmo1955	2029698	2030591	894	-	2029698	2030591	894	ORF	similar to integrase/recombinase	hypothetical protein - RAST_Product: Tyrosine recombinase XerD	Tyrosine recombinase XerD	Operon_352	Replication, recombination and repair	ATG	 
lmo1956	2030744	2031196	453	-	2030744	2031196	453	ORF	similar to transcriptional regulator (Fur family)	hypothetical protein - RAST_Product: Ferric uptake regulation protein FUR	Ferric uptake regulation protein FUR		Inorganic ion transport and metabolism	ATG	 
lmo1957	2031438	2032460	1023	-	2031438	2032460	1023	ORF	similar to ferrichrome ABC transporter (permease)	hypothetical protein - RAST_Product: ABC-type Fe3+-siderophore transport system, permease 2 component	ABC-type Fe3+-siderophore transport system, permease 2 component	Operon_353	Inorganic ion transport and metabolism	ATG	 
lmo1958	2032460	2033485	1026	-	2032460	2033485	1026	ORF	similar to ferrichrome ABC transporter (permease)	hypothetical protein - RAST_Product: ABC-type Fe3+-siderophore transport system, permease component	ABC-type Fe3+-siderophore transport system, permease component	Operon_353	Inorganic ion transport and metabolism	ATG	 
lmo1959	2033587	2034528	942	-	2033587	2034528	942	ORF	similar to ferrichrome binding protein	hypothetical protein - RAST_Product: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)	Operon_353	Inorganic ion transport and metabolism	TTG	 
lmo1960	2034693	2035517	825	+	2034693	2035517	825	ORF	similar to ferrichrome ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC-type Fe3+-siderophore transport system, ATPase component	ABC-type Fe3+-siderophore transport system, ATPase component	Operon_354	"Inorganic ion transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo1961	2035507	2036505	999	+	2035507	2036505	999	ORF	similar to oxidoreductases	hypothetical protein - RAST_Product: Thioredoxin reductase (EC 1.8.1.9)	Thioredoxin reductase (EC 1.8.1.9)	Operon_354	Posttranslational modification, protein turnover, chaperones	TTG	 
lmo1962	2036521	2037141	621	-	2036521	2037141	621	ORF	similar to transcription regulators (TetR family)	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Operon_355	Transcription	ATG	 
lmo1963	2037141	2037956	816	-	2037141	2037956	816	ORF		hypothetical protein	ABC transporter, permease protein	Operon_355	General function prediction only	GTG	 
lmo1964	2037953	2038840	888	-	2037953	2038840	888	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_355	Defense/virulence mechanisms	ATG	 
lmo1965	2039441	2039998	558	-	2039441	2039998	558	ORF		hypothetical protein - RAST_Product: ADP-ribose pyrophosphatase (EC 3.6.1.13)	ADP-ribose pyrophosphatase (EC 3.6.1.13)		"Replication, recombination and repair; General function prediction only;"	ATG	 
lmo1966	2040274	2040933	660	+	2040274	2040933	660	ORF		hypothetical protein - RAST_Product: 5-bromo-4-chloroindolyl phosphate hydrolysis protein	5-bromo-4-chloroindolyl phosphate hydrolysis protein	Operon_356	General function prediction only	ATG	 
lmo1967	2040911	2042110	1200	+	2040911	2042110	1200	ORF	similar to toxic ion resistance proteins	hypothetical protein - RAST_Product: Tellurite resistance protein	Tellurite resistance protein	Operon_356	Inorganic ion transport and metabolism	ATG	 
lmo1968	2042157	2042900	744	-	2042157	2042900	744	ORF	similar to creatinine amidohydrolases	hypothetical protein - RAST_Product: Creatinine amidohydrolase (EC 3.5.2.10)	Creatinine amidohydrolase (EC 3.5.2.10)		General function prediction only	ATG	 
lmo1969	2042913	2043521	609	-	2042913	2043521	609	ORF	similar to 2-keto-3-deoxygluconate-6-phosphate aldolase	hypothetical protein - RAST_Product: FIG00774803: hypothetical protein	FIG00774803: hypothetical protein		Carbohydrate transport and metabolism	TTG	 
lmo1970	2043540	2044457	918	-	2043540	2044457	918	ORF	similar to putative phosphotriesterase related proteins	hypothetical protein - RAST_Product: FIG00775016: hypothetical protein	FIG00775016: hypothetical protein		General function prediction only	ATG	 
lmo1971	2044481	2045749	1269	-	2044481	2045749	1269	ORF	"similar to pentitol PTS system enzyme II C component; membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr"	PTS system ascorbate-specific transporter subunit IIC	Putative integral membrane protein		Function unknown	ATG	 
lmo1972	2045765	2046046	282	-	2045765	2046046	282	ORF	similar to pentitol PTS system enzyme II B component	hypothetical protein - RAST_Product: PTS system IIB component	PTS system IIB component		Carbohydrate transport and metabolism	GTG	 
lmo1973	2046046	2046489	444	-	2046046	2046489	444	ORF	similar to PTS system enzyme II A component	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	TTG	 
lmo1974	2046507	2047256	750	-	2046507	2047256	750	ORF	similar to transcription regulators, (GntR family)	hypothetical protein - RAST_Product: transcriptional regulator, GntR family, putative	transcriptional regulator, GntR family, putative		Transcription	ATG	 
lmo1975	2047444	2048514	1071	-	2047444	2048514	1071	ORF	"similar to E. coli DNA-damage-inducible protein dinP; involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function"	DNA polymerase IV	DNA polymerase IV (EC 2.7.7.7)		Replication, recombination and repair	ATG	 
lmo1976	2048623	2049414	792	-	2048623	2049414	792	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: Oxidoreductase, short-chain dehydrogenase/reductase family	Oxidoreductase, short-chain dehydrogenase/reductase family	Operon_357	General function prediction only	ATG	 
lmo1977	2049419	2050339	921	-	2049419	2050339	921	ORF		hypothetical protein - RAST_Product: Ribonuclease Z (EC 3.1.26.11)	Ribonuclease Z (EC 3.1.26.11)	Operon_357	General function prediction only	ATG	 
lmo1978	2050639	2052114	1476	+	2050639	2052114	1476	ORF	"similar to glucose-6-phosphate 1-dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate"	glucose-6-phosphate 1-dehydrogenase	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)		Carbohydrate transport and metabolism	ATG	 
lmo1979	2052233	2052664	432	+	2052233	2052664	432	ORF		hypothetical protein - RAST_Product: DUF1694 domain-containing protein	DUF1694 domain-containing protein	Operon_358	Function unknown	ATG	 
lmo1980	2052696	2052833	138	+	2052696	2052833	138	ORF	lmo1980	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_358	Not in COGs	ATG	 
lmo1981	2052816	2053301	486	-	2052816	2053301	486	ORF		hypothetical protein - RAST_Product: FIG00775001: hypothetical protein	FIG00775001: hypothetical protein	Operon_359	Not in COGs	GTG	 
lmo1982	2053274	2053801	528	-	2053274	2053801	528	ORF		hypothetical protein - RAST_Product: GNAT family acetyltransferase BA4593	GNAT family acetyltransferase BA4593	Operon_359	Translation	GTG	 
lmo1983	2054493	2056187	1695	+	2054493	2056187	1695	ORF	"similar to dihydroxy-acid dehydratase; catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis"	dihydroxy-acid dehydratase	Dihydroxy-acid dehydratase (EC 4.2.1.9)	Operon_360	"Amino acid transport and metabolism; Carbohydrate transport and metabolism;"	ATG	 
lmo1984	2056205	2057926	1722	+	2056205	2057926	1722	ORF	similar to acetolactate synthase (acetohydroxy-acid synthase) (large subunit)	hypothetical protein - RAST_Product: Acetolactate synthase large subunit (EC 2.2.1.6)	Acetolactate synthase large subunit (EC 2.2.1.6)	Operon_360	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	GTG	 
lmo1985	2057927	2058418	492	+	2057927	2058418	492	ORF	"similar to acetolactate synthase (acetohydroxy-acid synthase) (small subunit); with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit"	acetolactate synthase 3 regulatory subunit	Acetolactate synthase small subunit (EC 2.2.1.6)	Operon_360	Amino acid transport and metabolism	ATG	 
lmo1986	2058516	2059511	996	+	2058516	2059511	996	ORF	"similar to ketol-acid reductoisomerase (acetohydroxy-acid isomeroreductase); catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis"	ketol-acid reductoisomerase	Ketol-acid reductoisomerase (EC 1.1.1.86)	Operon_360	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo1987	2059669	2061207	1539	+	2059669	2061207	1539	ORF	"similar to 2-isopropylmalate synthase; catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis"	2-isopropylmalate synthase	2-isopropylmalate synthase (EC 2.3.3.13)	Operon_360	Amino acid transport and metabolism	ATG	 
lmo1988	2061209	2062261	1053	+	2061209	2062261	1053	ORF	"similar to 3-isopropylmalate dehydrogenase; catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis"	3-isopropylmalate dehydrogenase	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Operon_360	"Energy production and conversion; Amino acid transport and metabolism;"	GTG	 
lmo1989	2062263	2063651	1389	+	2062263	2063651	1389	ORF	"similar to 3-isopropylmalate dehydratase (large subunit); dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate"	isopropylmalate isomerase large subunit	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Operon_360	Amino acid transport and metabolism	ATG	 
lmo1990	2063638	2064219	582	+	2063638	2064219	582	ORF	"similar to 3-isopropylmalate dehydratase (small subunit); catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D"	isopropylmalate isomerase small subunit	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Operon_360	Amino acid transport and metabolism	GTG	 
lmo1991	2064238	2065506	1269	+	2064238	2065506	1269	ORF	"similar to threonine dehydratase; catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic"	threonine dehydratase	Threonine dehydratase (EC 4.3.1.19)	Operon_360	Amino acid transport and metabolism	ATG	 
lmo1992	2065698	2066417	720	+	2065698	2066417	720	ORF	similar to alpha-acetolactate decarboxylase	hypothetical protein - RAST_Product: Alpha-acetolactate decarboxylase (EC 4.1.1.5)	Alpha-acetolactate decarboxylase (EC 4.1.1.5)		Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo1993	2066455	2067756	1302	-	2066455	2067756	1302	ORF	"similar to pyrimidine-nucleoside phosphorylase; Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway"	pyrimidine-nucleoside phosphorylase	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)		Nucleotide transport and metabolism	ATG	 
lmo1994	2067887	2068897	1011	-	2067887	2068897	1011	ORF	similar to transcription regulators (LacI family)	hypothetical protein - RAST_Product: Transcriptional regulator, LacI family	Transcriptional regulator, LacI family		Transcription	ATG	 
lmo1995	2068977	2069648	672	-	2068977	2069648	672	ORF	"similar to deoxyribose-phosphate aldolase; catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate"	deoxyribose-phosphate aldolase	Deoxyribose-phosphate aldolase (EC 4.1.2.4)		Nucleotide transport and metabolism	ATG	 
lmo1996	2069710	2070657	948	-	2069710	2070657	948	ORF	similar to transcription repressor of dra/nupC/pdp operon DeoR	hypothetical protein - RAST_Product: Deoxyribonucleoside regulator DeoR (transcriptional repressor)	Deoxyribonucleoside regulator DeoR (transcriptional repressor)		Transcription	ATG	 
lmo1997	2070754	2071170	417	-	2070754	2071170	417	ORF	similar to PTS mannose-specific enzyme IIA component	hypothetical protein - RAST_Product: PTS system, mannose-specific IIA component (EC 2.7.1.69)	PTS system, mannose-specific IIA component (EC 2.7.1.69)	Operon_361	Carbohydrate transport and metabolism	ATG	 
lmo1998	2071187	2072182	996	-	2071187	2072182	996	ORF	similar to opine catabolism protein	hypothetical protein - RAST_Product: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	Operon_361	Cell wall/membrane biogenesis	GTG	 
lmo1999	2072205	2073269	1065	-	2072205	2073269	1065	ORF	weakly similar to glucosamine-fructose-6-phosphate aminotransferase	hypothetical protein - RAST_Product: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	Operon_361	Cell wall/membrane biogenesis	ATG	 
lmo2000	2073282	2074103	822	-	2073282	2074103	822	ORF	similar to PTS mannose-specific enzyme IID component	hypothetical protein - RAST_Product: PTS system, mannose-specific IID component (EC 2.7.1.69)	PTS system, mannose-specific IID component (EC 2.7.1.69)	Operon_361	Carbohydrate transport and metabolism	ATG	 
lmo2001	2074084	2074902	819	-	2074084	2074902	819	ORF	similar to PTS mannose-specific enzyme IIC component	hypothetical protein - RAST_Product: PTS system, mannose-specific IIC component (EC 2.7.1.69)	PTS system, mannose-specific IIC component (EC 2.7.1.69)	Operon_361	Carbohydrate transport and metabolism	ATG	 
lmo2002	2074925	2075392	468	-	2074925	2075392	468	ORF	similar to PTS mannose-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, mannose-specific IIB component (EC 2.7.1.69)	PTS system, mannose-specific IIB component (EC 2.7.1.69)	Operon_361	Carbohydrate transport and metabolism	ATG	 
lmo2003	2075412	2076113	702	-	2075412	2076113	702	ORF	similar to transcription regulator GntR family	hypothetical protein - RAST_Product: transcriptional regulator, GntR family	transcriptional regulator, GntR family	Operon_361	Transcription	ATG	 
lmo2004	2076115	2076846	732	-	2076115	2076846	732	ORF	similar to transcription regulator GntR family	hypothetical protein - RAST_Product: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family	Operon_361	Transcription	ATG	 
lmo2005	2077019	2078014	996	-	2077019	2078014	996	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: putative oxidoreductase	putative oxidoreductase		Energy production and conversion	ATG	 
lmo2006	2078132	2079829	1698	-	2078132	2079829	1698	ORF	"similar to alpha-acetolactate synthase protein, AlsS; catalyzes the formation of 2-acetolactate from pyruvate in stationary phase"	acetolactate synthase	Acetolactate synthase, catabolic (EC 2.2.1.6)		"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo2007	2080027	2081484	1458	-	2080027	2081484	1458	ORF	weakly similar to putative sugar-binding lipoproteins	hypothetical protein - RAST_Product: Multiple sugar ABC transporter, substrate-binding protein	Multiple sugar ABC transporter, substrate-binding protein	Operon_362	Carbohydrate transport and metabolism	ATG	 
lmo2008	2081505	2082476	972	-	2081505	2082476	972	ORF	similar to putative ABC transporter, permease protein	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_362	Carbohydrate transport and metabolism	TTG	 
lmo2009	2082495	2083424	930	-	2082495	2083424	930	ORF	similar to putative transport system integral membrane protein	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_362	Carbohydrate transport and metabolism	TTG	 
lmo2010	2083537	2085021	1485	-	2083537	2085021	1485	ORF	similar to two-component response regulator	hypothetical protein - RAST_Product: DNA-binding response regulator	DNA-binding response regulator		Signal transduction mechanisms	ATG	 
lmo2011	2085021	2086760	1740	-	2085021	2086760	1740	ORF	similar to two-component sensor histidine kinase	hypothetical protein - RAST_Product: Two-component sensor kinase YesM (EC 2.7.3.-)	Two-component sensor kinase YesM (EC 2.7.3.-)		Signal transduction mechanisms	ATG	 
lmo2012	2086817	2087428	612	-	2086817	2087428	612	ORF		hypothetical protein - RAST_Product: FIG00774045: hypothetical protein	FIG00774045: hypothetical protein		Function unknown	ATG	 
lmo2013	2087489	2088793	1305	-	2087489	2088793	1305	ORF		hypothetical protein - RAST_Product: FIG00774529: hypothetical protein	FIG00774529: hypothetical protein	Operon_363	Function unknown	ATG	 
lmo2014	2088797	2091454	2658	-	2088797	2091454	2658	ORF	similar to putative sugar hydrolases	hypothetical protein - RAST_Product: Alpha-mannosidase (EC 3.2.1.24)	Alpha-mannosidase (EC 3.2.1.24)	Operon_363	Carbohydrate transport and metabolism	ATG	 
lmo2015	2091698	2094808	3111	+	2091698	2094808	3111	ORF	similar to alpha-mannosidase	hypothetical protein	Alpha-mannosidase (EC 3.2.1.24)		Carbohydrate transport and metabolism	ATG	 
lmo2016	2094877	2095077	201	-	2094877	2095077	201	ORF	similar to major cold-shock protein	hypothetical protein - RAST_Product: Cold shock protein CspD	Cold shock protein CspD		Transcription	ATG	 
lmo2017	2095366	2096061	696	-	2095366	2096061	696	ORF		hypothetical protein - RAST_Product: Acid phosphatase	Acid phosphatase	Operon_364	Lipid transport and metabolism	ATG	 
lmo2018	2096075	2097064	990	-	2096075	2097064	990	ORF	"similar to diaminopimelate epimerase; involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate"	diaminopimelate epimerase	Diaminopimelate epimerase (EC 5.1.1.7)	Operon_364	Amino acid transport and metabolism	ATG	 
lmo2019	2097176	2099941	2766	-	2097176	2099941	2766	ORF	"IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme"	isoleucyl-tRNA synthetase	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	Operon_364	Translation	ATG	 
lmo2020	2100224	2100751	528	-	2100224	2100751	528	ORF	similar to cell-division initiation protein (septum placement)	hypothetical protein - RAST_Product: Cell division initiation protein DivIVA	Cell division initiation protein DivIVA		Cell cycle control, mitosis and meiosis	ATG	 
lmo2021	2100845	2101366	522	-	2100845	2101366	522	ORF		hypothetical protein - RAST_Product: Transcriptional repressor for NAD biosynthesis in gram-positives	Transcriptional repressor for NAD biosynthesis in gram-positives		General function prediction only	ATG	 
lmo2022	2101371	2102477	1107	-	2101371	2102477	1107	ORF	similar to a NifS-like protein required for NAD biosynthesis	hypothetical protein - RAST_Product: Cysteine desulfurase (EC 2.8.1.7)	Cysteine desulfurase (EC 2.8.1.7)		Amino acid transport and metabolism	ATG	 
lmo2023	2102608	2104062	1455	+	2102608	2104062	1455	ORF	"similar to L-aspartate oxidase; catalyzes the formation of oxaloacetate from L-aspartate"	L-aspartate oxidase	L-aspartate oxidase (EC 1.4.3.16)	Operon_365	Coenzyme transport and metabolism	ATG	 
lmo2024	2104059	2104904	846	+	2104059	2104904	846	ORF	"similar to nicotinate-nucleotide pyrophosphorylase; catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide"	nicotinate-nucleotide pyrophosphorylase	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	Operon_365	Coenzyme transport and metabolism	ATG	 
lmo2025	2104901	2106001	1101	+	2104901	2106001	1101	ORF	"similar to quinolinate synthetase; 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate"	quinolinate synthetase	Quinolinate synthetase (EC 2.5.1.72)	Operon_365	Coenzyme transport and metabolism	ATG	 
lmo2026	2106329	2108209	1881	-	2106329	2108209	1881	ORF		peptidoglycan binding protein	Internalin-like protein (LPXTG motif) Lmo2026 homolog		Function unknown	GTG	 
lmo2027	2108500	2109603	1104	-	2108500	2109603	1104	ORF		putative cell surface protein, internalin proteins	Internalin-like protein Lmo2470 homolog		Function unknown	TTG	 
lmo2028	2110009	2110785	777	-	2110009	2110785	777	ORF		hypothetical protein	FIG001583: hypothetical protein, contains S4-like RNA binding domain		Function unknown	ATG	 
lmo2029	2110909	2111199	291	-	2110909	2111199	291	ORF		hypothetical protein - RAST_Product: Cell division protein YlmG/Ycf19 (putative), YggT family	Cell division protein YlmG/Ycf19 (putative), YggT family	Operon_366	Function unknown	TTG	 
lmo2030	2111222	2111680	459	-	2111222	2111680	459	ORF		hypothetical protein - RAST_Product: FIG001960: FtsZ-interacting protein related to cell division	FIG001960: FtsZ-interacting protein related to cell division	Operon_366	Function unknown	ATG	 
lmo2031	2111684	2112373	690	-	2111684	2112373	690	ORF		hypothetical protein - RAST_Product: Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	Operon_366	General function prediction only	ATG	 
lmo2032	2112492	2113667	1176	-	2112492	2113667	1176	ORF	"highly similar to cell-division initiation protein FtsZ; GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function"	cell division protein FtsZ	Cell division protein FtsZ (EC 3.4.24.-)	Operon_366	Cell cycle control, mitosis and meiosis	ATG	 
lmo2033	2113734	2115014	1281	-	2113734	2115014	1281	ORF	highly similar to cell-division protein FtsA	hypothetical protein - RAST_Product: Cell division protein FtsA	Cell division protein FtsA	Operon_366	Cell cycle control, mitosis and meiosis	ATG	 
lmo2034	2115381	2116193	813	-	2115381	2116193	813	ORF	similar to cell-division initiation protein divIB	hypothetical protein - RAST_Product: Cell division protein FtsQ	Cell division protein FtsQ	Operon_367	Cell wall/membrane biogenesis	ATG	 
lmo2035	2116216	2117307	1092	-	2116216	2117307	1092	ORF	"similar to peptidoglycan synthesis enzymes, putative phospho-N-acetylmuramoyl-pentapeptide-transferase; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis"	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	Operon_367	Cell wall/membrane biogenesis	ATG	 
lmo2036	2117304	2118671	1368	-	2117304	2118671	1368	ORF	"similar to UDP-N-acetylmuramoylalanine D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation"	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	Operon_367	Cell wall/membrane biogenesis	ATG	 
lmo2037	2118812	2119786	975	-	2118812	2119786	975	ORF	"similar to phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan"	phospho-N-acetylmuramoyl-pentapeptide-transferase	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	Operon_367	Cell wall/membrane biogenesis	GTG	 
lmo2038	2119833	2121308	1476	-	2119833	2121308	1476	ORF	"similar to UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate"	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	Operon_367	Cell wall/membrane biogenesis	ATG	 
lmo2039	2121483	2123738	2256	-	2121483	2123738	2256	ORF	similar to penicillin-binding protein 2B	hypothetical protein	penicillin-binding protein	Operon_368	Cell wall/membrane biogenesis	ATG	 
lmo2040	2123735	2124097	363	-	2123735	2124097	363	ORF	similar to cell-division protein FtsL	hypothetical protein - RAST_Product: Cell division protein FtsL	Cell division protein FtsL	Operon_368	Cell cycle control, mitosis and meiosis	GTG	 
lmo2041	2124114	2125052	939	-	2124114	2125052	939	ORF		S-adenosyl-methyltransferase MraW	rRNA small subunit methyltransferase H	Operon_368	Cell wall/membrane biogenesis	ATG	 
lmo2042	2125065	2125496	432	-	2125065	2125496	432	ORF	"MraZ; UPF0040; crystal structure shows similarity to AbrB"	cell division protein MraZ	Cell division protein MraZ	Operon_368	Function unknown	ATG	 
lmo2043	2125699	2126946	1248	-	2125699	2126946	1248	ORF	similar to integral membrane proteins	hypothetical protein - RAST_Product: FIG00774440: hypothetical protein	FIG00774440: hypothetical protein		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2044	2127062	2128876	1815	+	2127062	2128876	1815	ORF	similar to transporter binding proteins	hypothetical protein - RAST_Product: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)		General function prediction only	ATG	 
lmo2045	2128806	2129192	387	-	2128806	2129192	387	ORF	lmo2045	hypothetical protein		Operon_369	Not in COGs	ATG	 
lmo2046	2129185	2130078	894	-	2129185	2130078	894	ORF	"weakly similar to ketopantoate reductase involved in thiamin biosynthesis; ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis"	2-dehydropantoate 2-reductase	2-dehydropantoate 2-reductase (EC 1.1.1.169)	Operon_369	Coenzyme transport and metabolism	ATG	 
lmo2047	2130228	2130401	174	-	2130228	2130401	174	ORF	some L32 proteins have zinc finger motifs consisting of CXXC while others do not	50S ribosomal protein L32	LSU ribosomal protein L32p		Translation	ATG	 
lmo2048	2130492	2131028	537	-	2130492	2131028	537	ORF		hypothetical protein - RAST_Product: COG1399 protein in cluster with ribosomal protein L32p, Firmicutes subfamily	COG1399 protein in cluster with ribosomal protein L32p, Firmicutes subfamily		General function prediction only	ATG	 
lmo2049	2131158	2132330	1173	+	2131158	2132330	1173	ORF		hypothetical protein - RAST_Product: FIG007079: UPF0348 protein family	FIG007079: UPF0348 protein family	Operon_370	General function prediction only	ATG	 
lmo2050	2132412	2134652	2241	+	2132412	2134652	2241	ORF	similar to excinuclease ABC (subunit A)	hypothetical protein - RAST_Product: Excinuclease ABC subunit A paralog of unknown function	Excinuclease ABC subunit A paralog of unknown function	Operon_370	Replication, recombination and repair	ATG	 
lmo2051	2134695	2135735	1041	-	2134695	2135735	1041	ORF	weakly similar to proteases	hypothetical protein - RAST_Product: Lon-like protease with PDZ domain	Lon-like protease with PDZ domain	Operon_371	Signal transduction mechanisms	ATG	 
lmo2052	2135754	2136236	483	-	2135754	2136236	483	ORF	"similar to phosphopantetheine adenylyltransferase; Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA"	phosphopantetheine adenylyltransferase	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	Operon_371	Coenzyme transport and metabolism	ATG	 
lmo2053	2136239	2136796	558	-	2136239	2136796	558	ORF		hypothetical protein - RAST_Product: Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)	Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)	Operon_371	Replication, recombination and repair	ATG	 
lmo2054	2136893	2137174	282	-	2136893	2137174	282	ORF		hypothetical protein	hypothetical Cytosolic Protein	Operon_372	Function unknown	ATG	 
lmo2055	2137205	2137654	450	-	2137205	2137654	450	ORF		hypothetical protein - RAST_Product: ComK regulator	ComK regulator	Operon_372	Function unknown	TTG	 
lmo2056	2137702	2138757	1056	-	2137702	2138757	1056	ORF		hypothetical protein - RAST_Product: Allergen V5/Tpx-1 related	Allergen V5/Tpx-1 related		Function unknown	GTG	 
lmo2057	2138904	2139809	906	-	2138904	2139809	906	ORF	"highly similar to heme A farnesyltransferase; converts protoheme IX and farnesyl diphosphate to heme O"	protoheme IX farnesyltransferase	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB		Posttranslational modification, protein turnover, chaperones	GTG	 
lmo2058	2140046	2140963	918	+	2140046	2140963	918	ORF	similar to heme O oxygenase	hypothetical protein - RAST_Product: Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA	Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2059	2141071	2141814	744	+	2141071	2141814	744	ORF	similar to potassium channel subunit	"hypothetical protein - RAST_Product: Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family"	"Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family"		Inorganic ion transport and metabolism	TTG	 
lmo2060	2141820	2142461	642	-	2141820	2142461	642	ORF		hypothetical protein - RAST_Product: Uncharacterized protein conserved in bacteria	Uncharacterized protein conserved in bacteria	Operon_373	Function unknown	ATG	 
lmo2061	2142480	2143097	618	-	2142480	2143097	618	ORF		hypothetical protein - RAST_Product: FIG00774218: hypothetical protein	FIG00774218: hypothetical protein	Operon_373	Function unknown	ATG	 
lmo2062	2143109	2144734	1626	-	2143109	2144734	1626	ORF	similar to copper export proteins	hypothetical protein - RAST_Product: Copper resistance protein D	Copper resistance protein D	Operon_373	"Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2063	2144874	2145065	192	+	2144874	2145065	192	ORF	lmo2063	hypothetical protein - RAST_Product: FIG00774238: hypothetical protein	FIG00774238: hypothetical protein	Operon_374	Not in COGs	ATG	 
lmo2064	2145127	2145513	387	+	2145127	2145513	387	ORF	"similar to large conductance mechanosensitive channel protein; homopentamer; channel that opens in response to pressure or hypoosmotic shock"	large-conductance mechanosensitive channel	Large-conductance mechanosensitive channel	Operon_374	Cell wall/membrane biogenesis	ATG	 
lmo2065	2145652	2146044	393	-	2145652	2146044	393	ORF	lmo2065	hypothetical protein - RAST_Product: FIG00774550: hypothetical protein	FIG00774550: hypothetical protein		Not in COGs	ATG	 
lmo2066	2146089	2146298	210	-	2146089	2146298	210	ORF	lmo2066	hypothetical protein - RAST_Product: FIG00774898: hypothetical protein	FIG00774898: hypothetical protein		Not in COGs	ATG	 
lmo2067	2146449	2147426	978	-	2146449	2147426	978	ORF	similar to conjugated bile acid hydrolase	hypothetical protein - RAST_Product: Choloylglycine hydrolase (EC 3.5.1.24)	Choloylglycine hydrolase (EC 3.5.1.24)		Defense/virulence mechanisms	ATG	 
lmo2068	2147684	2149312	1629	-	2147684	2149312	1629	ORF	"60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth"	chaperonin GroEL	Heat shock protein 60 family chaperone GroEL	Operon_375	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2069	2149348	2149632	285	-	2149348	2149632	285	ORF	"10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring"	co-chaperonin GroES	Heat shock protein 60 family co-chaperone GroES	Operon_375	Posttranslational modification, protein turnover, chaperones	TTG	 
lmo2070	2149868	2150554	687	+	2149868	2150554	687	ORF		hypothetical protein - RAST_Product: CAAX amino terminal protease family protein	CAAX amino terminal protease family protein	Operon_376	General function prediction only	TTG	 
lmo2071	2150556	2150759	204	+	2150556	2150759	204	ORF	lmo2071	hypothetical protein - RAST_Product: FIG00774125: hypothetical protein	FIG00774125: hypothetical protein	Operon_376	Not in COGs	ATG	 
lmo2072	2150786	2151433	648	-	2150786	2151433	648	ORF	"similar to a putative DNA binding proteins; modulates transcription in response to the NADH/NAD(+) redox state"	redox-sensing transcriptional repressor Rex	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)		General function prediction only	ATG	 
lmo2073	2151744	2153696	1953	+	2151744	2153696	1953	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter ATP-binding protein uup	ABC transporter ATP-binding protein uup	Operon_377	General function prediction only	ATG	 
lmo2074	2153720	2154679	960	+	2153720	2154679	960	ORF		hypothetical protein - RAST_Product: FIG00774466: hypothetical protein	FIG00774466: hypothetical protein	Operon_377	General function prediction only	ATG	 
lmo2075	2155223	2156245	1023	-	2155223	2156245	1023	ORF	"similar to glycoprotein endopeptidase; in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity"	putative DNA-binding/iron metalloprotein/AP endonuclease	YgjD/Kae1/Qri7 family, required for N6-threonylcarbamoyl adenosine t(6)A37 modification in tRNA	Operon_378	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2076	2156242	2156697	456	-	2156242	2156697	456	ORF	similar to ribosomal protein alanine acetyltransferase	hypothetical protein	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	Operon_378	General function prediction only	GTG	 
lmo2077	2156694	2157386	693	-	2156694	2157386	693	ORF	similar to glycoprotease	hypothetical protein - RAST_Product: Inactive homolog of metal-dependent proteases, putative molecular chaperone	Inactive homolog of metal-dependent proteases, putative molecular chaperone	Operon_378	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2078	2157383	2157844	462	-	2157383	2157844	462	ORF		hypothetical protein - RAST_Product: ATPase YjeE, predicted to have essential role in cell wall biosynthesis	ATPase YjeE, predicted to have essential role in cell wall biosynthesis	Operon_378	General function prediction only	ATG	 
lmo2079	2157949	2159094	1146	-	2157949	2159094	1146	ORF	lmo2079	hypothetical protein	FIG00774850: hypothetical protein		Not in COGs	ATG	 
lmo2080	2159224	2159604	381	-	2159224	2159604	381	ORF	lmo2080	hypothetical protein - RAST_Product: FIG00774784: hypothetical protein	FIG00774784: hypothetical protein	Operon_379	Not in COGs	ATG	 
lmo2081	2159697	2160053	357	-	2159697	2160053	357	ORF	"may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling"	camphor resistance protein CrcB	Protein crcB homolog 1	Operon_379	Cell cycle control, mitosis and meiosis	GTG	 
lmo2082	2160043	2160432	390	-	2160043	2160432	390	ORF	"similar to unknown proetin; may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling"	camphor resistance protein CrcB	CrcB protein	Operon_379	Cell cycle control, mitosis and meiosis	ATG	 
lmo2083	2160538	2161164	627	-	2160538	2161164	627	ORF	lmo2083	hypothetical protein - RAST_Product: FIG00774914: hypothetical protein	FIG00774914: hypothetical protein	Operon_379	Function unknown	ATG	 
lmo2084	2161161	2162054	894	-	2161161	2162054	894	ORF	lmo2084	hypothetical protein - RAST_Product: Aminoglycoside phosphotransferase	Aminoglycoside phosphotransferase		General function prediction only	ATG	 
lmo2085	2162323	2164011	1689	-	2162323	2164011	1689	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo2085 homolog		Cell wall/membrane biogenesis	ATG	 
lmo2086	2164106	2165377	1272	-	2164106	2165377	1272	ORF	weakly similar to transcription regulators	hypothetical protein - RAST_Product: DNA-binding protein	DNA-binding protein		"Transcription; General function prediction only;"	ATG	 
lmo2087	2166012	2167343	1332	-	2166012	2167343	1332	ORF		hypothetical protein - RAST_Product: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	Operon_380	Defense/virulence mechanisms	ATG	 
lmo2088	2167353	2167943	591	-	2167353	2167943	591	ORF	similar to transcription regulators	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Operon_380	Transcription	ATG	 
lmo2089	2168054	2169097	1044	-	2168054	2169097	1044	ORF	similar to lipases	hypothetical protein - RAST_Product: Esterase/lipase	Esterase/lipase		Lipid transport and metabolism	GTG	 
lmo2090	2169312	2170526	1215	+	2169312	2170526	1215	ORF	"similar to argininosuccinate synthase; catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming"	argininosuccinate synthase	Argininosuccinate synthase (EC 6.3.4.5)	Operon_381	Amino acid transport and metabolism	ATG	 
lmo2091	2170530	2171900	1371	+	2170530	2171900	1371	ORF	"similar to argininosuccinate lyase; catalyzes the formation of arginine from (N-L-arginino)succinate"	argininosuccinate lyase	Argininosuccinate lyase (EC 4.3.2.1)	Operon_381	Amino acid transport and metabolism	ATG	 
lmo2092	2172068	2173591	1524	+	2172068	2173591	1524	ORF		glycine betaine transporter BetL	Glycine betaine transporter OpuD		Amino acid transport and metabolism	TTG	 
lmo2093	2173635	2173832	198	-	2173635	2173832	198	ORF	lmo2093	hypothetical protein - RAST_Product: FIG00774187: hypothetical protein	FIG00774187: hypothetical protein		Not in COGs	ATG	 
lmo2094	2173836	2174486	651	-	2173836	2174486	651	ORF	similar to L-fuculose-phosphate aldolase	hypothetical protein - RAST_Product: class II aldolase/adducin domain protein	class II aldolase/adducin domain protein		Carbohydrate transport and metabolism	ATG	 
lmo2095	2174488	2175420	933	-	2174488	2175420	933	ORF	similar to 1-phosphofructokinase	hypothetical protein - RAST_Product: Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56)	Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56)		Carbohydrate transport and metabolism	ATG	 
lmo2096	2175438	2176787	1350	-	2175438	2176787	1350	ORF	similar to PTS system galactitol-specific enzyme IIC component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIC component (EC 2.7.1.69)	PTS system, galactitol-specific IIC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2097	2176815	2177090	276	-	2176815	2177090	276	ORF	similar to PTS system galactitol-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIB component (EC 2.7.1.69)	PTS system, galactitol-specific IIB component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2098	2177096	2177563	468	-	2177096	2177563	468	ORF	similar to PTS system galactitol-specific enzyme IIA component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIA component (EC 2.7.1.69)	PTS system, galactitol-specific IIA component (EC 2.7.1.69)		"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	GTG	 
lmo2099	2177571	2179577	2007	-	2177571	2179577	2007	ORF	similar to transcription antiterminator	hypothetical protein - RAST_Product: Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component (EC 2.7.1.69)	Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component (EC 2.7.1.69)		"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2100	2179758	2181203	1446	-	2179758	2181203	1446	ORF	similar to transcriptional regulator (GntR family) and to aminotransferase (MocR-like)	hypothetical protein - RAST_Product: Predicted transcriptional regulator of pyridoxine metabolism	Predicted transcriptional regulator of pyridoxine metabolism		"Transcription; Amino acid transport and metabolism;"	ATG	 
lmo2101	2181329	2182216	888	+	2181329	2182216	888	ORF	"similar to a protein required for pyridoxine synthesis; with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate"	pyridoxal biosynthesis lyase PdxS	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)	Operon_382	Coenzyme transport and metabolism	ATG	 
lmo2102	2182218	2182784	567	+	2182218	2182784	567	ORF	"lmo2102; with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate"	glutamine amidotransferase subunit PdxT	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)	Operon_382	Coenzyme transport and metabolism	ATG	 
lmo2103	2182823	2183800	978	-	2182823	2183800	978	ORF	"similar to phosphotransacetylase; in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta"	phosphotransacetylase	Phosphate acetyltransferase (EC 2.3.1.8)		Energy production and conversion	ATG	 
lmo2104	2184120	2184347	228	+	2184120	2184347	228	ORF	lmo2104	hypothetical protein - RAST_Product: Hypothetical protein FIG016644	Hypothetical protein FIG016644	Operon_383	Inorganic ion transport and metabolism	ATG	 
lmo2105	2184344	2186338	1995	+	2184344	2186338	1995	ORF	similar to ferrous iron transport protein B	hypothetical protein - RAST_Product: Ferrous iron transport protein B	Ferrous iron transport protein B	Operon_383	Inorganic ion transport and metabolism	ATG	 
lmo2106	2186557	2187411	855	-	2186557	2187411	855	ORF		hypothetical protein	Ser/Thr protein phosphatase family protein		General function prediction only	ATG	 
lmo2107	2187663	2188424	762	+	2187663	2188424	762	ORF	similar to transcriptional regulator (DeoR family)	hypothetical protein - RAST_Product: Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Operon_384	"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo2108	2188430	2189563	1134	+	2188430	2189563	1134	ORF	similar to N-acetylglucosamine-6-phosphate deacetylase	hypothetical protein - RAST_Product: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	Operon_384	Carbohydrate transport and metabolism	ATG	 
lmo2109	2189605	2190402	798	+	2189605	2190402	798	ORF	similar to hydrolase	hypothetical protein - RAST_Product: hydrolase, alpha/beta fold family	hydrolase, alpha/beta fold family	Operon_384	General function prediction only	ATG	 
lmo2110	2190489	2191445	957	-	2190489	2191445	957	ORF	similar to mannnose-6 phospate isomerase	hypothetical protein - RAST_Product: Mannose-6-phosphate isomerase (EC 5.3.1.8)	Mannose-6-phosphate isomerase (EC 5.3.1.8)	Operon_385	Carbohydrate transport and metabolism	ATG	 
lmo2111	2191525	2192256	732	-	2191525	2192256	732	ORF	similar to FMN-containing NADPH-linked nitro/flavin reductase	hypothetical protein - RAST_Product: Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-)	Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-)	Operon_385	Energy production and conversion	ATG	 
lmo2112	2192379	2192609	231	+	2192379	2192609	231	ORF	lmo2112	hypothetical protein - RAST_Product: DNA-binding protein	DNA-binding protein	Operon_386	Not in COGs	GTG	 
lmo2113	2192693	2193448	756	+	2192693	2193448	756	ORF		putative heme peroxidase	Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria	Operon_386	Function unknown	ATG	 
lmo2114	2193645	2194412	768	+	2193645	2194412	768	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Bacitracin export ATP-binding protein BceA	Bacitracin export ATP-binding protein BceA	Operon_387	Defense/virulence mechanisms	ATG	 
lmo2115	2194399	2196339	1941	+	2194399	2196339	1941	ORF	similar to ABC transporter (permease)	hypothetical protein - RAST_Product: Bacitracin export permease protein BceB	Bacitracin export permease protein BceB	Operon_387	Defense/virulence mechanisms	ATG	 
lmo2116	2196382	2197206	825	-	2196382	2197206	825	ORF	lmo2116	hypothetical protein	FIG00774020: hypothetical protein		Not in COGs	TTG	 
lmo2117	2197267	2197728	462	+	2197267	2197728	462	ORF		hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family		"Transcription; General function prediction only;"	ATG	 
lmo2118	2197763	2199115	1353	-	2197763	2199115	1353	ORF	"similar to phosphoglucomutase; catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate"	phosphoglucosamine mutase	Phosphoglucosamine mutase (EC 5.4.2.10)		Carbohydrate transport and metabolism	ATG	 
lmo2119	2199365	2200723	1359	-	2199365	2200723	1359	ORF		hypothetical protein	uncharacterized secreted protein, YBBR Bacillus subtilis homolog	Operon_388	Function unknown	ATG	 
lmo2120	2200723	2201544	822	-	2200723	2201544	822	ORF		hypothetical protein - RAST_Product: Hypothetical protein YbbP, contains nucleotide-binding domain of DisA bacterial checkpoint controller	Hypothetical protein YbbP, contains nucleotide-binding domain of DisA bacterial checkpoint controller	Operon_388	Function unknown	ATG	 
lmo2121	2201719	2203980	2262	-	2201719	2203980	2262	ORF	similar to maltosephosphorylase	maltose phosphorylase	Maltose phosphorylase (EC 2.4.1.8)	Operon_389	Carbohydrate transport and metabolism	ATG	 
lmo2122	2203996	2204829	834	-	2203996	2204829	834	ORF	similar to maltodextrose utilization protein MalA	hypothetical protein - RAST_Product: Maltodextrose utilization protein MalA	Maltodextrose utilization protein MalA	Operon_389	Function unknown	ATG	 
lmo2123	2204857	2205708	852	-	2204857	2205708	852	ORF	similar to maltodextrin ABC-transport system (permease)	hypothetical protein - RAST_Product: Maltose/maltodextrin ABC transporter, permease protein MalG	Maltose/maltodextrin ABC transporter, permease protein MalG	Operon_389	Carbohydrate transport and metabolism	ATG	 
lmo2124	2205709	2207016	1308	-	2205709	2207016	1308	ORF	similar to maltodextrin ABC-transport system (permease)	hypothetical protein - RAST_Product: Maltose/maltodextrin ABC transporter, permease protein MalF	Maltose/maltodextrin ABC transporter, permease protein MalF	Operon_389	Carbohydrate transport and metabolism	ATG	 
lmo2125	2207103	2208362	1260	-	2207103	2208362	1260	ORF	similar to maltose/maltodextrin ABC-transporter (binding protein)	hypothetical protein - RAST_Product: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	Operon_389	Carbohydrate transport and metabolism	ATG	 
lmo2126	2208576	2210351	1776	-	2208576	2210351	1776	ORF	similar to maltogenic amylase	hypothetical protein - RAST_Product: Neopullulanase (EC 3.2.1.135)	Neopullulanase (EC 3.2.1.135)	Operon_389	Carbohydrate transport and metabolism	ATG	 
lmo2127	2210609	2211244	636	+	2210609	2211244	636	ORF	lmo2127	hypothetical protein - RAST_Product: CAAX amino terminal protease family protein	CAAX amino terminal protease family protein		General function prediction only	ATG	 
lmo2128	2211280	2212245	966	-	2211280	2212245	966	ORF	similar to transcription regulator, LacI family	hypothetical protein - RAST_Product: Maltose operon transcriptional repressor MalR, LacI family	Maltose operon transcriptional repressor MalR, LacI family		Transcription	ATG	 
lmo2129	2212384	2212620	237	-	2212384	2212620	237	ORF	lmo2129	hypothetical protein	FIG00774447: hypothetical protein		Not in COGs	ATG	 
lmo2130	2213218	2215041	1824	-	2213218	2215041	1824	ORF		hypothetical protein - RAST_Product: Amino acid permease	Amino acid permease		Amino acid transport and metabolism	ATG	 
lmo2131	2216054	2216743	690	-	2216054	2216743	690	ORF	lmo2131	hypothetical protein - RAST_Product: FIG00774656: hypothetical protein	FIG00774656: hypothetical protein		Signal transduction mechanisms	ATG	 
lmo2132	2217222	2217953	732	+	2217222	2217953	732	ORF	lmo2132	hypothetical protein - RAST_Product: FIG00774113: hypothetical protein	FIG00774113: hypothetical protein		Signal transduction mechanisms	ATG	 
lmo2133	2217963	2218862	900	-	2217963	2218862	900	ORF	similar to fructose-1,6-biphosphate aldolase type II	hypothetical protein - RAST_Product: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)		Carbohydrate transport and metabolism	ATG	 
lmo2134	2218879	2219733	855	-	2218879	2219733	855	ORF	similar to fructose-1,6-biphosphate aldolase type II	hypothetical protein - RAST_Product: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) homolog	Fructose-bisphosphate aldolase class II (EC 4.1.2.13) homolog		Carbohydrate transport and metabolism	ATG	 
lmo2135	2219751	2220845	1095	-	2219751	2220845	1095	ORF	similar to PTS system, fructose-specific enzyme IIC component	hypothetical protein	PTS system, fructose-specific IIBC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2136	2220862	2221173	312	-	2220862	2221173	312	ORF	similar to PTS system, fructose-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIB component (EC 2.7.1.69)	PTS system, fructose-specific IIB component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2137	2221186	2221659	474	-	2221186	2221659	474	ORF	similar to PTS system, fructose-specific enzyme IIA component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIA component (EC 2.7.1.69)	PTS system, fructose-specific IIA component (EC 2.7.1.69)		"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2138	2221671	2223128	1458	-	2221671	2223128	1458	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional antiterminator of lichenan operon, BglG family	Transcriptional antiterminator of lichenan operon, BglG family		Transcription	ATG	 
lmo2139	2223324	2224226	903	+	2223324	2224226	903	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_390	General function prediction only	GTG	 
lmo2140	2224219	2225454	1236	+	2224219	2225454	1236	ORF	similar to ABC transporter (membrane protein)	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_390	"Energy production and conversion; Inorganic ion transport and metabolism;"	ATG	 
lmo2141	2225471	2225944	474	+	2225471	2225944	474	ORF		hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_390	"Transcription; General function prediction only;"	ATG	 
lmo2142	2226533	2227198	666	-	2226533	2227198	666	ORF	lmo2142	hypothetical protein - RAST_Product: FIG00774386: hypothetical protein	FIG00774386: hypothetical protein		Transcription	ATG	 
lmo2143	2227412	2229154	1743	+	2227412	2229154	1743	ORF	weakly similar to mannose-6-phosphate isomerase	hypothetical protein - RAST_Product: mannose-6-phosphate isomerase, class I	mannose-6-phosphate isomerase, class I		Carbohydrate transport and metabolism	TTG	 
lmo2144	2229193	2229927	735	-	2229193	2229927	735	ORF	similar to transcription regulator GntR family	hypothetical protein - RAST_Product: transcriptional regulator, GntR family	transcriptional regulator, GntR family		Transcription	ATG	 
lmo2145	2230042	2231058	1017	-	2230042	2231058	1017	ORF		hypothetical protein - RAST_Product: Predicted nicotinate-regulated transporter BH3254	Predicted nicotinate-regulated transporter BH3254		General function prediction only	ATG	 
lmo2146	2231127	2231981	855	-	2231127	2231981	855	ORF	similar to transcription regulator LysR family	hypothetical protein - RAST_Product: LysR family transcriptional regulator YeiE	LysR family transcriptional regulator YeiE		Transcription	ATG	 
lmo2147	2232087	2233094	1008	+	2232087	2233094	1008	ORF		hypothetical protein - RAST_Product: Putative membrane protein YeiH	Putative membrane protein YeiH	Operon_391	Function unknown	ATG	 
lmo2148	2233150	2233791	642	+	2233150	2233791	642	ORF		hypothetical protein - RAST_Product: FIG00774416: hypothetical protein	FIG00774416: hypothetical protein	Operon_391	Function unknown	ATG	 
lmo2149	2233841	2234158	318	-	2233841	2234158	318	ORF		hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		General function prediction only	ATG	 
lmo2150	2234357	2234533	177	+	2234357	2234533	177	ORF	lmo2150	hypothetical protein - RAST_Product: FIG00774336: hypothetical protein	FIG00774336: hypothetical protein		Not in COGs	ATG	 
lmo2151	2234575	2234874	300	-	2234575	2234874	300	ORF		hypothetical protein - RAST_Product: FIG00774036: hypothetical protein	FIG00774036: hypothetical protein		General function prediction only	GTG	 
lmo2152	2234982	2235308	327	-	2234982	2235308	327	ORF	similar to thioredoxin	hypothetical protein - RAST_Product: thioredoxin, putative	thioredoxin, putative	Operon_392	"Posttranslational modification, protein turnover, chaperones; Energy production and conversion;"	ATG	 
lmo2153	2235305	2235742	438	-	2235305	2235742	438	ORF	"similar to flavodoxin; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group"	flavodoxin	flavodoxin	Operon_392	Energy production and conversion	ATG	 
lmo2154	2235739	2236788	1050	-	2235739	2236788	1050	ORF	"similar to ribonucleoside-diphosphate reductase, subunit beta; B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE"	ribonucleotide-diphosphate reductase subunit beta	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	Operon_392	Nucleotide transport and metabolism	ATG	 
lmo2155	2236844	2239135	2292	-	2236844	2239135	2292	ORF	"similar to ribonucleoside-diphosphate reductase, subunit alpha; Catalyzes the rate-limiting step in dNTP synthesis"	ribonucleotide-diphosphate reductase subunit alpha	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	Operon_392	Nucleotide transport and metabolism	ATG	 
lmo2156	2239672	2240013	342	+	2239672	2240013	342	ORF	lmo2156	hypothetical protein - RAST_Product: FIG00774317: hypothetical protein	FIG00774317: hypothetical protein		Function unknown	ATG	 
lmo2157	2240068	2241969	1902	-	2240068	2241969	1902	ORF		hypothetical protein - RAST_Product: alkyl sulfatase (EC 3.1.6.-)	alkyl sulfatase (EC 3.1.6.-)		Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo2158	2242097	2242282	186	-	2242097	2242282	186	ORF	similar to B. subtilis YwmG protein	hypothetical protein - RAST_Product: FIG00774237: hypothetical protein	FIG00774237: hypothetical protein		Function unknown	ATG	 
lmo2159	2242376	2243425	1050	-	2242376	2243425	1050	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: Myo-inositol 2-dehydrogenase (EC 1.1.1.18)	Myo-inositol 2-dehydrogenase (EC 1.1.1.18)	Operon_393	General function prediction only	ATG	 
lmo2160	2243448	2244416	969	-	2243448	2244416	969	ORF		hypothetical protein - RAST_Product: Inosose isomerase (EC 5.3.99.-)	Inosose isomerase (EC 5.3.99.-)	Operon_393	Carbohydrate transport and metabolism	ATG	 
lmo2161	2244419	2245141	723	-	2244419	2245141	723	ORF	lmo2161	hypothetical protein - RAST_Product: FIG00774369: hypothetical protein	FIG00774369: hypothetical protein	Operon_393	Carbohydrate transport and metabolism	ATG	 
lmo2162	2245143	2245883	741	-	2245143	2245883	741	ORF		hypothetical protein - RAST_Product: Inosose dehydratase (EC 4.2.1.44)	Inosose dehydratase (EC 4.2.1.44)	Operon_393	Carbohydrate transport and metabolism	ATG	 
lmo2163	2245899	2246975	1077	-	2245899	2246975	1077	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	Operon_393	General function prediction only	ATG	 
lmo2164	2247050	2247928	879	-	2247050	2247928	879	ORF	similar to transcriptional regulator (AraC/XylS family)	hypothetical protein - RAST_Product: Transcriptional regulator, AraC family	Transcriptional regulator, AraC family		Transcription	ATG	 
lmo2165	2247998	2248693	696	-	2247998	2248693	696	ORF	similar to transcription regulator CRP/FNR family	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_394	Signal transduction mechanisms	ATG	 
lmo2166	2248946	2249617	672	-	2248946	2249617	672	ORF	lmo2166	hypothetical protein - RAST_Product: cyclic nucleotide-binding protein	cyclic nucleotide-binding protein	Operon_394	Signal transduction mechanisms	ATG	 
lmo2167	2249683	2250300	618	-	2249683	2250300	618	ORF		hypothetical protein	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	Operon_394	General function prediction only	ATG	 
lmo2168	2250431	2250820	390	+	2250431	2250820	390	ORF	similar to glyoxalase I	hypothetical protein - RAST_Product: Lactoylglutathione lyase (EC 4.4.1.5)	Lactoylglutathione lyase (EC 4.4.1.5)	Operon_395	Amino acid transport and metabolism	ATG	 
lmo2169	2250846	2251004	159	+	2250846	2251004	159	ORF	lmo2169	hypothetical protein - RAST_Product: FIG00774182: hypothetical protein	FIG00774182: hypothetical protein	Operon_395	Not in COGs	ATG	 
lmo2170	2251050	2251979	930	-	2251050	2251979	930	ORF		hypothetical protein - RAST_Product: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)		General function prediction only	ATG	 
lmo2171	2252001	2253224	1224	-	2252001	2253224	1224	ORF	similar to antiporter proteins	hypothetical protein - RAST_Product: Oxalate/formate antiporter	Oxalate/formate antiporter		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2172	2253221	2254804	1584	-	2253221	2254804	1584	ORF	similar to propionate CoA-transferase	hypothetical protein - RAST_Product: Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8)	Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8)		Lipid transport and metabolism	TTG	 
lmo2173	2255034	2256401	1368	-	2255034	2256401	1368	ORF	similar to sigma-54-dependent transcriptional activator	hypothetical protein - RAST_Product: Sigma-54 dependent transcriptional regulator	Sigma-54 dependent transcriptional regulator		"Transcription; Signal transduction mechanisms;"	ATG	 
lmo2174	2256507	2257580	1074	-	2256507	2257580	1074	ORF		hypothetical protein - RAST_Product: GGDEF domain protein	GGDEF domain protein		Signal transduction mechanisms	TTG	 
lmo2175	2257754	2258515	762	-	2257754	2258515	762	ORF	"similar to dehydrogenase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis"	3-ketoacyl-(acyl-carrier-protein) reductase	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)		"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo2176	2258697	2259260	564	+	2258697	2259260	564	ORF	similar to transcriptional regulator (tetR family)	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family		Transcription	ATG	 
lmo2177	2259366	2259713	348	+	2259366	2259713	348	ORF		hypothetical protein - RAST_Product: FIG01225675: hypothetical protein	FIG01225675: hypothetical protein		Not in COGs	ATG	 
lmo2178	2259753	2264591	4839	-	2259753	2264591	4839	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo2178 homolog		Cell wall/membrane biogenesis	GTG	 
lmo2179	2264772	2268230	3459	-	2264772	2268230	3459	ORF		peptidoglycan binding protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo2179 homolog		Not in COGs	GTG	 
lmo2180	2268424	2268900	477	-	2268424	2268900	477	ORF		hypothetical protein - RAST_Product: FIG00774300: hypothetical protein	FIG00774300: hypothetical protein		Not in COGs	ATG	 
lmo2181	2268961	2269701	741	-	2268961	2269701	741	ORF		hypothetical protein - RAST_Product: NPQTN specific sortase B	NPQTN specific sortase B	Operon_396	Cell wall/membrane biogenesis	GTG	 
lmo2182	2269705	2270484	780	-	2269705	2270484	780	ORF	similar to ferrichrome ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Heme transporter analogous to IsdDEF, ATP-binding protein	Heme transporter analogous to IsdDEF, ATP-binding protein	Operon_396	"Inorganic ion transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo2183	2270465	2271454	990	-	2270465	2271454	990	ORF	similar to ferrichrome ABC transporter (permease)	hypothetical protein - RAST_Product: Heme transporter IsdDEF, permease component IsdF	Heme transporter IsdDEF, permease component IsdF	Operon_396	Inorganic ion transport and metabolism	ATG	 
lmo2184	2271444	2272316	873	-	2271444	2272316	873	ORF	similar to ferrichrome ABC transporter (binding protein)	hypothetical protein - RAST_Product: Heme transporter IsdDEF, lipoprotein IsdE	Heme transporter IsdDEF, lipoprotein IsdE	Operon_396	Inorganic ion transport and metabolism	ATG	 
lmo2185	2272403	2274112	1710	-	2272403	2274112	1710	ORF	lmo2185	hypothetical protein - RAST_Product: Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC	Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC	Operon_396	Cell wall/membrane biogenesis	ATG	 
lmo2186	2274127	2274750	624	-	2274127	2274750	624	ORF	lmo2186	hypothetical protein - RAST_Product: NPQTN cell wall anchored protein IsdC	NPQTN cell wall anchored protein IsdC	Operon_396	Cell wall/membrane biogenesis	ATG	 
lmo2187	2274961	2275221	261	-	2274961	2275221	261	ORF	lmo2187	hypothetical protein - RAST_Product: FIG00774205: hypothetical protein	FIG00774205: hypothetical protein		Not in COGs	ATG	 
lmo2188	2275520	2277325	1806	-	2275520	2277325	1806	ORF	similar to oligoendopeptidase	hypothetical protein - RAST_Product: Oligoendopeptidase F	Oligoendopeptidase F		Amino acid transport and metabolism	TTG	 
lmo2189	2277398	2278513	1116	-	2277398	2278513	1116	ORF	similar to a putative competence protein from streptococcus pneumoniae	hypothetical protein	Competence protein CoiA		General function prediction only	GTG	 
lmo2190	2278639	2279292	654	-	2278639	2279292	654	ORF	enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence	adaptor protein	Negative regulator of genetic competence MecA		"Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms; Cell motility;"	ATG	 
lmo2191	2279524	2279919	396	-	2279524	2279919	396	ORF	"the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress"	transcriptional regulator Spx	Arsenate reductase and related proteins, glutaredoxin family		Inorganic ion transport and metabolism	ATG	 
lmo2192	2280238	2281206	969	-	2280238	2281206	969	ORF	similar to oligopeptide ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Operon_397	Amino acid transport and metabolism	ATG	 
lmo2193	2281203	2282279	1077	-	2281203	2282279	1077	ORF	similar to oligopeptide ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Operon_397	"Amino acid transport and metabolism; Inorganic ion transport and metabolism;"	ATG	 
lmo2194	2282297	2283331	1035	-	2282297	2283331	1035	ORF	similar to oligopeptide ABC transporter (permease)	hypothetical protein - RAST_Product: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Operon_397	"Amino acid transport and metabolism; Inorganic ion transport and metabolism;"	ATG	 
lmo2195	2283331	2284260	930	-	2283331	2284260	930	ORF	similar to oligopeptide ABC transporter (permease)	hypothetical protein - RAST_Product: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Operon_397	"Amino acid transport and metabolism; Inorganic ion transport and metabolism;"	ATG	 
lmo2196	2284539	2286215	1677	-	2284539	2286215	1677	ORF	similar to pheromone ABC transporter (binding protein)	hypothetical protein - RAST_Product: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Operon_397	Amino acid transport and metabolism	GTG	 
lmo2197	2286839	2287183	345	+	2286839	2287183	345	ORF	lmo2197	hypothetical protein - RAST_Product: FIG00774927: hypothetical protein	FIG00774927: hypothetical protein		Energy production and conversion	ATG	 
lmo2198	2287518	2288513	996	+	2287518	2288513	996	ORF	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA	tryptophanyl-tRNA synthetase	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)		Translation	ATG	 
lmo2199	2288571	2288987	417	-	2288571	2288987	417	ORF		hypothetical protein - RAST_Product: Organic hydroperoxide resistance protein	Organic hydroperoxide resistance protein	Operon_398	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2200	2288971	2289423	453	-	2288971	2289423	453	ORF	similar to transcription regulator	hypothetical protein	Organic hydroperoxide resistance transcriptional regulator	Operon_398	Transcription	TTG	 
lmo2201	2289545	2290786	1242	-	2289545	2290786	1242	ORF	similar to 3-oxoacyl-acyl-carrier protein synthase	hypothetical protein - RAST_Product: 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	Operon_399	"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism;"	ATG	 
lmo2202	2290989	2291927	939	-	2290989	2291927	939	ORF	"similar to 3-oxoacyl- acyl-carrier protein synthase; FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs"	3-oxoacyl-(acyl carrier protein) synthase III	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	Operon_399	Lipid transport and metabolism	ATG	 
lmo2203	2292047	2293174	1128	-	2292047	2293174	1128	ORF	similar to N-acetylmuramoyl-L-alanine amidase and to internalin B	hypothetical protein	N-acetylmuramoyl-L-alanine amidase, family 4		"Cell motility; Intracellular trafficking and secretion;"	TTG	 
lmo2204	2293497	2293685	189	+	2293497	2293685	189	ORF		hypothetical protein	FIG00774676: hypothetical protein		Not in COGs	ATG	 
lmo2205	2293775	2294464	690	-	2293775	2294464	690	ORF	similar to phosphoglyceromutase 1	hypothetical protein - RAST_Product: Phosphoglycerate mutase (EC 5.4.2.1)	Phosphoglycerate mutase (EC 5.4.2.1)	Operon_400	Carbohydrate transport and metabolism	ATG	 
lmo2206	2294555	2297155	2601	-	2294555	2297155	2601	ORF	similar to endopeptidase Clp ATP-binding chain B (ClpB)	hypothetical protein - RAST_Product: ClpB protein	ClpB protein	Operon_400	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2207	2297304	2297981	678	-	2297304	2297981	678	ORF		hypothetical protein - RAST_Product: FIG01231219: hypothetical protein	FIG01231219: hypothetical protein		General function prediction only	ATG	 
lmo2208	2298093	2298863	771	-	2298093	2298863	771	ORF		hypothetical protein - RAST_Product: hydrolase, haloacid dehalogenase-like family	hydrolase, haloacid dehalogenase-like family	Operon_401	General function prediction only	GTG	 
lmo2209	2298927	2299712	786	-	2298927	2299712	786	ORF	lmo2209	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_401	General function prediction only	ATG	 
lmo2210	2299833	2300177	345	-	2299833	2300177	345	ORF	lmo2210	hypothetical protein - RAST_Product: FIG00774091: hypothetical protein	FIG00774091: hypothetical protein		Not in COGs	ATG	 
lmo2211	2300334	2301263	930	-	2300334	2301263	930	ORF	"similar to ferrochelatase; protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic"	ferrochelatase	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	Operon_402	Coenzyme transport and metabolism	ATG	 
lmo2212	2301260	2302321	1062	-	2301260	2302321	1062	ORF	"similar to uroporphyrinogen III decarboxylase; catalyzes the formation of coproporphyrinogen from uroporphyrinogen III"	uroporphyrinogen decarboxylase	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	Operon_402	Coenzyme transport and metabolism	ATG	 
lmo2213	2302518	2303021	504	+	2302518	2303021	504	ORF		hypothetical protein	Uncharacterized protein, homolog of B.subtilis yhgC		General function prediction only	ATG	 
lmo2214	2303060	2304283	1224	-	2303060	2304283	1224	ORF	similar to ABC transporter (membrane protein)	hypothetical protein	ABC transporter, permease protein EscB	Operon_403	Intracellular trafficking and secretion	ATG	 
lmo2215	2304267	2305019	753	-	2304267	2305019	753	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein EcsA	ABC transporter, ATP-binding protein EcsA	Operon_403	Defense/virulence mechanisms	ATG	 
lmo2216	2305180	2305602	423	+	2305180	2305602	423	ORF	similar to histidine triad (HIT) protein	hypothetical protein - RAST_Product: Histidine triad (HIT) nucleotide-binding protein, similarity with At5g48545 and yeast YDL125C (HNT1)	Histidine triad (HIT) nucleotide-binding protein, similarity with At5g48545 and yeast YDL125C (HNT1)	Operon_404	"Nucleotide transport and metabolism; Carbohydrate transport and metabolism; General function prediction only;"	ATG	 
lmo2217	2305632	2305994	363	+	2305632	2305994	363	ORF		hypothetical protein - RAST_Product: Hypothetical protein SAV1839	Hypothetical protein SAV1839	Operon_404	General function prediction only	ATG	 
lmo2218	2306177	2306716	540	+	2306177	2306716	540	ORF	lmo2218	hypothetical protein - RAST_Product: Hypothetical protein SAV1840	Hypothetical protein SAV1840		Not in COGs	ATG	 
lmo2219	2306833	2307714	882	+	2306833	2307714	882	ORF	similar to post-translocation molecular chaperone	hypothetical protein - RAST_Product: Foldase protein PrsA precursor (EC 5.2.1.8) @ Foldase clustered with pyrimidine conversion	Foldase protein PrsA precursor (EC 5.2.1.8) @ Foldase clustered with pyrimidine conversion		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2220	2307755	2308696	942	-	2307755	2308696	942	ORF	"similar to S. aureus Cbf1 protein; catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates"	3'-5' exoribonuclease YhaM	CMP-binding-factor 1	Operon_405	General function prediction only	ATG	 
lmo2221	2308741	2311464	2724	-	2308741	2311464	2724	ORF		hypothetical protein - RAST_Product: DNA double-strand break repair Rad50 ATPase	DNA double-strand break repair Rad50 ATPase	Operon_405	Function unknown	ATG	 
lmo2222	2311461	2312696	1236	-	2311461	2312696	1236	ORF		hypothetical protein - RAST_Product: DNA double-strand break repair protein Mre11	DNA double-strand break repair protein Mre11	Operon_405	Replication, recombination and repair	ATG	 
lmo2223	2312839	2313192	354	-	2312839	2313192	354	ORF		hypothetical protein - RAST_Product: putative transcriptional regulator	putative transcriptional regulator		Function unknown	ATG	 
lmo2224	2313274	2314407	1134	-	2313274	2314407	1134	ORF		hypothetical protein - RAST_Product: Hypothetical protein SAV1846	Hypothetical protein SAV1846		Function unknown	ATG	 
lmo2225	2314511	2315878	1368	-	2314511	2315878	1368	ORF	"similar to fumarate hydratase; class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle"	fumarate hydratase	Fumarate hydratase class II (EC 4.2.1.2)		Energy production and conversion	ATG	 
lmo2226	2315948	2316742	795	-	2315948	2316742	795	ORF		hypothetical protein - RAST_Product: FIG00774511: hypothetical protein	FIG00774511: hypothetical protein	Operon_406	Not in COGs	ATG	 
lmo2227	2316739	2317644	906	-	2316739	2317644	906	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_406	Defense/virulence mechanisms	ATG	 
lmo2228	2317644	2317841	198	-	2317644	2317841	198	ORF		hypothetical protein - RAST_Product: FIG00774397: hypothetical protein	FIG00774397: hypothetical protein	Operon_406	Not in COGs	TTG	 
lmo2229	2317950	2320094	2145	-	2317950	2320094	2145	ORF	similar to penicillin-binding protein	hypothetical protein - RAST_Product: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)		Cell wall/membrane biogenesis	ATG	 
lmo2230	2320416	2320841	426	+	2320416	2320841	426	ORF	similar to arsenate reductase	hypothetical protein - RAST_Product: arsenate reductase	arsenate reductase		Signal transduction mechanisms	ATG	 
lmo2231	2320906	2321775	870	+	2320906	2321775	870	ORF		hypothetical protein - RAST_Product: Cobalt-zinc-cadmium resistance protein	Cobalt-zinc-cadmium resistance protein		Inorganic ion transport and metabolism	ATG	 
lmo2232	2322031	2323335	1305	+	2322031	2323335	1305	ORF		hypothetical protein - RAST_Product: Hemolysins and related proteins containing CBS domains	Hemolysins and related proteins containing CBS domains		General function prediction only	TTG	 
lmo2233	2323375	2324253	879	-	2323375	2324253	879	ORF	similar to transcriptional regulators (LysR family)	hypothetical protein - RAST_Product: transcriptional regulator, LysR family	transcriptional regulator, LysR family		Transcription	ATG	 
lmo2234	2324554	2325408	855	+	2324554	2325408	855	ORF		hypothetical protein - RAST_Product: Inosose isomerase (EC 5.3.99.-)	Inosose isomerase (EC 5.3.99.-)	Operon_407	Carbohydrate transport and metabolism	ATG	 
lmo2235	2325477	2327402	1926	+	2325477	2327402	1926	ORF	similar to NADH oxidase	hypothetical protein	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)	Operon_407	"Energy production and conversion; General function prediction only;"	TTG	 
lmo2236	2327461	2328330	870	+	2327461	2328330	870	ORF	"similar to oxidoreductase; catalyzes the conversion of shikimate to 3-dehydroshikimate"	shikimate 5-dehydrogenase	Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)	Operon_407	Amino acid transport and metabolism	ATG	 
lmo2237	2328363	2329571	1209	+	2328363	2329571	1209	ORF	similar to transport system permease protein	hypothetical protein - RAST_Product: transport protein	transport protein	Operon_407	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2238	2329731	2330921	1191	+	2329731	2330921	1191	ORF	similar to transport system permease protein	hypothetical protein - RAST_Product: major facilitator family transporter	major facilitator family transporter	Operon_407	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2239	2330959	2332023	1065	-	2330959	2332023	1065	ORF	lmo2239	hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_408	Not in COGs	ATG	 
lmo2240	2332020	2332898	879	-	2332020	2332898	879	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: FIG00775611: hypothetical protein	FIG00775611: hypothetical protein	Operon_408	Defense/virulence mechanisms	TTG	 
lmo2241	2332888	2333283	396	-	2332888	2333283	396	ORF	similar to transcriptional regulators (GntR family)	hypothetical protein	Transcriptional regulator, GntR family	Operon_408	Transcription	ATG	 
lmo2242	2333375	2333857	483	-	2333375	2333857	483	ORF	similar to O6-methylguanine-DNA methyltransferase	hypothetical protein - RAST_Product: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)		Replication, recombination and repair	ATG	 
lmo2243	2334003	2334569	567	+	2334003	2334569	567	ORF	similar to methylphosphotriester-DNA alkyltransferase and transcriptional regulator	hypothetical protein - RAST_Product: ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Operon_409	Nucleotide transport and metabolism	TTG	 
lmo2244	2334586	2335455	870	+	2334586	2335455	870	ORF	similar to putative ribosomal large subunit pseudouridine synthase	hypothetical protein - RAST_Product: Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type	Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type	Operon_409	Translation	ATG	 
lmo2245	2335468	2335860	393	-	2335468	2335860	393	ORF		hypothetical protein - RAST_Product: glyoxalase family protein	glyoxalase family protein	Operon_410	Amino acid transport and metabolism	ATG	 
lmo2246	2335862	2336518	657	-	2335862	2336518	657	ORF		hypothetical protein - RAST_Product: DNA alkylation repair enzyme	DNA alkylation repair enzyme	Operon_410	Replication, recombination and repair	ATG	 
lmo2247	2336515	2337399	885	-	2336515	2337399	885	ORF	similar to oxidoreductase	hypothetical protein - RAST_Product: oxidoreductase of aldo/keto reductase family, subgroup 2	oxidoreductase of aldo/keto reductase family, subgroup 2	Operon_410	General function prediction only	TTG	 
lmo2248	2337786	2338406	621	+	2337786	2338406	621	ORF		hypothetical protein - RAST_Product: Phosphate transport regulator (distant homolog of PhoU)	Phosphate transport regulator (distant homolog of PhoU)	Operon_411	Inorganic ion transport and metabolism	ATG	 
lmo2249	2338420	2339418	999	+	2338420	2339418	999	ORF	similar to low-affinity inorganic phosphate transporter	hypothetical protein - RAST_Product: Probable low-affinity inorganic phosphate transporter	Probable low-affinity inorganic phosphate transporter	Operon_411	Inorganic ion transport and metabolism	ATG	 
lmo2250	2339611	2341071	1461	+	2339611	2341071	1461	ORF	similar to amino acid ABC transporter, permease protein	hypothetical protein - RAST_Product: Amino acid ABC transporter, amino acid-binding/permease protein	Amino acid ABC transporter, amino acid-binding/permease protein	Operon_412	"Amino acid transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2251	2341064	2341789	726	+	2341064	2341789	726	ORF	similar to amino acid ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: amino acid ABC transporter, ATP-binding protein	amino acid ABC transporter, ATP-binding protein	Operon_412	Amino acid transport and metabolism	GTG	 
lmo2252	2341865	2343013	1149	+	2341865	2343013	1149	ORF	"similar to aspartate aminotransferase; catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate"	aspartate aminotransferase	Aspartate aminotransferase (EC 2.6.1.1)	Operon_412	Amino acid transport and metabolism	ATG	 
lmo2253	2343056	2343685	630	-	2343056	2343685	630	ORF	similar to phosphoglucomutase	hypothetical protein - RAST_Product: hydrolase, haloacid dehalogenase-like family	hydrolase, haloacid dehalogenase-like family		General function prediction only	GTG	 
lmo2254	2343858	2345150	1293	+	2343858	2345150	1293	ORF		hypothetical protein - RAST_Product: Xanthine/uracil/thiamine/ascorbate permease family protein	Xanthine/uracil/thiamine/ascorbate permease family protein		General function prediction only	ATG	 
lmo2255	2345260	2345526	267	+	2345260	2345526	267	ORF	lmo2255	hypothetical protein - RAST_Product: FIG00774062: hypothetical protein	FIG00774062: hypothetical protein		Not in COGs	GTG	 
lmo2256	2345567	2346088	522	-	2345567	2346088	522	ORF		hypothetical protein - RAST_Product: ThiJ/PfpI family protein	ThiJ/PfpI family protein		General function prediction only	ATG	 
lmo2257	2346252	2346596	345	-	2346252	2346596	345	ORF		hypothetical protein			Not in COGs	TTG	 
lmo2258	2346593	2346784	192	-	2346593	2346784	192	ORF	lmo2258	hypothetical protein - RAST_Product: ribulose-phosphate 3-epimerase family protein	ribulose-phosphate 3-epimerase family protein		Not in COGs	ATG	 
lmo2259	2346935	2347285	351	+	2346935	2347285	351	ORF	similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIA	hypothetical protein - RAST_Product: PTS system, beta-glucoside-specific, IIA component	PTS system, beta-glucoside-specific, IIA component		Carbohydrate transport and metabolism	ATG	 
lmo2260	2347276	2348151	876	-	2347276	2348151	876	ORF		hypothetical protein - RAST_Product: Acetyltransferase, GNAT family, potentially associated with YqeK	Acetyltransferase, GNAT family, potentially associated with YqeK		"Transcription; General function prediction only;"	ATG	 
lmo2261	2348231	2348539	309	-	2348231	2348539	309	ORF		hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		General function prediction only	ATG	 
lmo2262	2348604	2349356	753	-	2348604	2349356	753	ORF		hypothetical protein - RAST_Product: Putative hydrolase of the alpha/beta superfamily	Putative hydrolase of the alpha/beta superfamily		General function prediction only	ATG	 
lmo2263	2349475	2350320	846	+	2349475	2350320	846	ORF	similar to unkown proteins	hypothetical protein	FIG002540: Haloacid dehalogenase-like hydrolase		General function prediction only	TTG	 
lmo2264	2350398	2351300	903	-	2350398	2351300	903	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_413	Function unknown	ATG	 
lmo2265	2351384	2351746	363	-	2351384	2351746	363	ORF		hypothetical protein - RAST_Product: Uncharacterized protein UPF0344	Uncharacterized protein UPF0344	Operon_413	Not in COGs	ATG	 
lmo2266	2351767	2352615	849	-	2351767	2352615	849	ORF		hypothetical protein - RAST_Product: Fumarylacetoacetate hydrolase family protein	Fumarylacetoacetate hydrolase family protein	Operon_413	Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo2267	2352616	2356323	3708	-	2352616	2356323	3708	ORF	similar to ATP-dependent deoxyribonuclease (subunit A)	hypothetical protein - RAST_Product: ATP-dependent nuclease, subunit A	ATP-dependent nuclease, subunit A	Operon_413	Replication, recombination and repair	ATG	 
lmo2268	2356325	2359798	3474	-	2356325	2359798	3474	ORF	similar to ATP-dependent deoxyribonuclease (subunit B)	hypothetical protein	ATP-dependent nuclease, subunit B	Operon_413	Replication, recombination and repair	ATG	 
lmo2269	2359948	2360184	237	-	2359948	2360184	237	ORF	lmo2269	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein	Operon_413	Not in COGs	GTG	 
lmo2270	2360435	2360713	279	+	2360435	2360713	279	A118 phage	similar to competence transcription factor ComK, N terminal part	hypothetical protein - RAST_Product: Competence transcription factor	Competence transcription factor		Transcription	ATG	 
lmo2271	2360908	2361141	234	-	2360908	2361141	234	A118 phage	lmo2271	hypothetical protein - RAST_Product: FIG00775160: hypothetical protein	FIG00775160: hypothetical protein		Not in COGs	ATG	 
lmo2272	2361582	2361791	210	+	2361582	2361791	210	A118 phage	lmo2272	hypothetical protein - RAST_Product: Lmo2272 protein	Lmo2272 protein		Not in COGs	ATG	 
lmo2273	2361897	2362274	378	+	2361897	2362274	378	A118 phage	protein gp30 [Bacteriophage A118]	protein gp30	Protein gp30 [Bacteriophage A118]	Operon_414	Not in COGs	ATG	 
lmo2274	2362306	2362656	351	+	2362306	2362656	351	A118 phage	protein gp29 [Bacteriophage A118]	protein gp29	Protein gp29 [Bacteriophage A118]	Operon_414	Not in COGs	ATG	 
lmo2275	2362661	2363110	450	+	2362661	2363110	450	A118 phage	Portein gp28 [Bacteriophage A118]	protein gp28	Protein gp28 [Bacteriophage A118]	Operon_414	Not in COGs	ATG	 
lmo2276	2363135	2363632	498	+	2363135	2363632	498	A118 phage	similar to an unknown bacteriophage protein	hypothetical protein - RAST_Product: Hypothetical protein, Lmo2276 homolog	Hypothetical protein, Lmo2276 homolog	Operon_414	Not in COGs	GTG	 
lmo2277	2363709	2364260	552	-	2363709	2364260	552	A118 phage	lmo2277	hypothetical protein - RAST_Product: Lmo2277 protein	Lmo2277 protein		Nucleotide transport and metabolism	GTG	 
lmo2278	2364754	2365599	846	-	2364754	2365599	846	A118 phage		L-alanoyl-D-glutamate peptidase	Endolysin, L-alanyl-D-glutamate peptidase (EC 3.4.-.-) [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2279	2365599	2365880	282	-	2365599	2365880	282	A118 phage	holin [Bacteriophage A118]	holin	Holin [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2280	2365893	2366258	366	-	2365893	2366258	366	A118 phage	protein gp23 [Bacteriophage A118]	protein gp23	Protein gp23 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2281	2366288	2366446	159	-	2366288	2366446	159	A118 phage	protein gp22 [Bacteriophage A118]	protein gp22	Protein gp22 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2282	2366451	2366768	318	-	2366451	2366768	318	A118 phage	protein gp21 [Bacteriophage A118]	protein gp21	Putative short tail fibre [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2283	2366780	2367853	1074	-	2366780	2367853	1074	A118 phage	protein gp20 [Bacteriophage A118]	protein gp20	Putative long tail fibre [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2284	2367853	2368881	1029	-	2367853	2368881	1029	A118 phage	Protein gp19 [Bacteriophage A118]	protein gp19	Putative tail or base plate protein gp19 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2285	2368882	2369907	1026	-	2368882	2369907	1026	A118 phage	Protein gp18 [Bacteriophage A118]	protein gp18	Putative tail or base plate protein gp18 [Bacteriophage A118]	Operon_415	Translation	ATG	 
lmo2286	2369916	2370734	819	-	2369916	2370734	819	A118 phage	Protein gp17 [Bacteriophage A118]	protein gp17	Putative tail or base plate protein gp17 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2287	2370736	2376099	5364	-	2370736	2376099	5364	A118 phage	putative tape-measure [Bacteriophage A118]	putative tape-measure	Tail tape-measure protein [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2288	2376110	2376715	606	-	2376110	2376715	606	A118 phage	Protein gp15 [Bacteriophage A118]	protein gp15	Protein gp15 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2289	2376721	2377143	423	-	2376721	2377143	423	A118 phage	Protein gp14 [Bacteriophage A118]	protein gp14	Protein gp14 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2290	2377198	2377530	333	-	2377198	2377530	333	A118 phage	Portein gp13 [Bacteriophage A118]	protein gp13	Protein gp13 [Bacteriophage A118]	Operon_415	Cell motility	ATG	 
lmo2291	2377460	2377894	435	-	2377460	2377894	435	A118 phage	major tail shaft protein [Bacteriophage A118]	major tail shaft protein	Phage major tail shaft protein	Operon_415	Not in COGs	ATG	 
lmo2292	2377897	2378304	408	-	2377897	2378304	408	A118 phage	Portein gp11 [Bacteriophage A118]	protein gp11	Protein gp11 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2293	2378304	2378642	339	-	2378304	2378642	339	A118 phage	Protein gp10 [Bacteriophage A118]	protein gp10	Protein gp10 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2294	2378642	2379004	363	-	2378642	2379004	363	A118 phage	Protein gp9 [Bacteriophage A118]	protein gp9	Protein gp9 [Bacteriophage A118]	Operon_415	Signal transduction mechanisms	ATG	 
lmo2295	2379004	2379399	396	-	2379004	2379399	396	A118 phage	Protein gp8 [Bacteriophage A118]	protein gp8	Protein gp8 [Bacteriophage A118]	Operon_415	Not in COGs	ATG	 
lmo2296	2379418	2380419	1002	-	2379418	2380419	1002	A118 phage	similar to coat protein [Bacteriophage SPP1]	hypothetical protein - RAST_Product: Phage capsid protein	Phage capsid protein	Operon_415	Not in COGs	ATG	 
lmo2297	2380419	2381009	591	-	2380419	2381009	591	A118 phage	putative scaffolding protein [Bacteriophage A118]	putative scaffolding protein	Phage capsid scaffolding protein	Operon_415	"Cell motility; Signal transduction mechanisms;"	ATG	 
lmo2298	2381088	2382227	1140	-	2381088	2382227	1140	A118 phage	Protein gp4 [Bacteriophage A118]	protein gp4	Minor capsid protein [Bacteriophage A118] / Phage minor capsid protein	Operon_415	Not in COGs	ATG	 
lmo2299	2382228	2383988	1761	-	2382228	2383988	1761	A118 phage	putative portal protein [Bacteriophage A118]	putative portal protein	Portal protein [Bacteriophage A118]	Operon_415	Not in COGs	TTG	 
lmo2300	2384001	2385332	1332	-	2384001	2385332	1332	A118 phage		putative terminase large subunit from bacteriophage A118	Terminase large subunit [Bacteriophage A118]	Operon_415	General function prediction only	ATG	 
lmo2301	2385301	2386095	795	-	2385301	2386095	795	A118 phage	similar to putative terminase small subunit from Bacteriophage A118	hypothetical protein - RAST_Product: Terminase small subunit [Bacteriophage A118]	Terminase small subunit [Bacteriophage A118]	Operon_415	Replication, recombination and repair	GTG	 
lmo2302	2386141	2386680	540	-	2386141	2386680	540	A118 phage	lmo2302	hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo2303	2387046	2387480	435	-	2387046	2387480	435	A118 phage	Protein gp66 [Bacteriophage A118]	protein gp66	LmaC, associated with virulence in Listeria		Not in COGs	ATG	 
lmo2304	2387499	2387663	165	-	2387499	2387663	165	A118 phage		bacteriophage A118 gp65 protein	Protein gp65 [Bacteriophage A118]		Not in COGs	ATG	 
lmo2305	2387792	2388175	384	-	2387792	2388175	384	A118 phage	lmo2305	hypothetical protein - RAST_Product: Hypothetical protein, Lmo2305 homolog [Bacteriophage A118]	Hypothetical protein, Lmo2305 homolog [Bacteriophage A118]		Not in COGs	ATG	 
lmo2306	2388179	2388583	405	-	2388179	2388583	405	A118 phage	similar to phage protein	hypothetical protein	Hypothetical protein, Lmo2306 homolog [Bacteriophage A118]		Not in COGs	TTG	 
lmo2307	2388528	2388710	183	-	2388528	2388710	183	A118 phage		hypothetical protein	Hypothetical protein, Lmo2307 homolog [Bacteriophage A118]		Not in COGs	ATG	 
lmo2308	2388729	2389211	483	-	2388729	2389211	483	A118 phage	similar to single-stranded DNA-binding protein	hypothetical protein - RAST_Product: Single-stranded DNA-binding protein (prophage associated)	Single-stranded DNA-binding protein (prophage associated)		Replication, recombination and repair	ATG	 
lmo2309	2389208	2389387	180	-	2389208	2389387	180	A118 phage	lmo2309	hypothetical protein - RAST_Product: FIG00775316: hypothetical protein	FIG00775316: hypothetical protein		Not in COGs	ATG	 
lmo2310	2389491	2389658	168	-	2389491	2389658	168	A118 phage	lmo2310	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo2311	2389655	2390116	462	-	2389655	2390116	462	A118 phage	lmo2311	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo2312	2390113	2390583	471	-	2390113	2390583	471	A118 phage	lmo2312	hypothetical protein - RAST_Product: conserved hypothetical protein	conserved hypothetical protein		Function unknown	ATG	 
lmo2313	2390580	2391023	444	-	2390580	2391023	444	A118 phage	similar to a bacteriophage protein	hypothetical protein - RAST_Product: Hypothetical protein, Lmo2313 homolog [Bacteriophage A118]	Hypothetical protein, Lmo2313 homolog [Bacteriophage A118]		Not in COGs	ATG	 
lmo2314	2391020	2391217	198	-	2391020	2391217	198	A118 phage	lmo2314	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo2315	2391220	2391816	597	-	2391220	2391816	597	A118 phage	similar to protein gp51 [Bacteriophage A118]	hypothetical protein - RAST_Product: Protein gp51 [Bacteriophage A118]	Protein gp51 [Bacteriophage A118]		Not in COGs	ATG	 
lmo2316	2391813	2392625	813	-	2391813	2392625	813	A118 phage	similar to site-specific DNA-methyltransferase	hypothetical protein - RAST_Product: Methyltransferase	Methyltransferase		Replication, recombination and repair	GTG	 
lmo2317	2392622	2393596	975	-	2392622	2393596	975	A118 phage	similar to protein gp49 [Bacteriophage A118]	hypothetical protein - RAST_Product: Protein gp49, replication initiation [Bacteriophage A118]	Protein gp49, replication initiation [Bacteriophage A118]		Replication, recombination and repair	ATG	 
lmo2318	2393613	2394311	699	-	2393613	2394311	699	A118 phage	lmo2318	hypothetical protein - RAST_Product: putative recombination protein / Single-stranded DNA-binding protein	putative recombination protein / Single-stranded DNA-binding protein		Not in COGs	ATG	 
lmo2319	2394317	2394793	477	-	2394317	2394793	477	A118 phage	similar to bacteriophage proteins	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo2320	2394790	2394984	195	-	2394790	2394984	195	A118 phage	lmo2320	hypothetical protein - RAST_Product: FIG00774562: hypothetical protein	FIG00774562: hypothetical protein		Not in COGs	ATG	 
lmo2321	2395290	2395478	189	-	2395290	2395478	189	A118 phage	lmo2321	hypothetical protein - RAST_Product: Protein gp45 [Bacteriophage A118]	Protein gp45 [Bacteriophage A118]		Not in COGs	ATG	 
lmo2322	2395586	2395801	216	-	2395586	2395801	216	A118 phage	gp44 [Bacteriophage A118]	gp44	Protein gp44 [Bacteriophage A118]		Not in COGs	ATG	 
lmo2323	2395798	2396331	534	-	2395798	2396331	534	A118 phage	gp43 [Bacteriophage A118]	hypothetical protein - RAST_Product: Protein gp43 [Bacteriophage A118]	Protein gp43 [Bacteriophage A118]		Not in COGs	ATG	 
lmo2324	2396454	2397230	777	-	2396454	2397230	777	A118 phage	similar to anti-repressor [Bacteriophage A118]	hypothetical protein - RAST_Product: Phage antirepressor protein / Antirepressor [Bacteriophage A118]	Phage antirepressor protein / Antirepressor [Bacteriophage A118]		"Transcription; Function unknown;"	ATG	 
lmo2325	2397212	2397487	276	-	2397212	2397487	276	A118 phage	lmo2325	hypothetical protein			Not in COGs	TTG	 
lmo2326	2397493	2397774	282	-	2397493	2397774	282	A118 phage	similar to protein gp41 [Bacteriophage A118]	hypothetical protein - RAST_Product: Protein gp41 [Bacteriophage A118]	Protein gp41 [Bacteriophage A118]		Not in COGs	ATG	 
lmo2327	2397800	2398084	285	-	2397800	2398084	285	A118 phage	lmo2327	hypothetical protein - RAST_Product: FIG00774252: hypothetical protein	FIG00774252: hypothetical protein		Not in COGs	ATG	 
lmo2328	2398287	2398529	243	-	2398287	2398529	243	A118 phage	similar to transcription regulator	hypothetical protein - RAST_Product: Repressor (cro-like) [Bacteriophage A118]	Repressor (cro-like) [Bacteriophage A118]		Transcription	ATG	 
lmo2329	2398685	2399161	477	+	2398685	2399161	477	A118 phage	similar to a putative repressor protein [Bacteriophage A118]	hypothetical protein	Repressor (CI-like) [Bacteriophage A118]		Transcription	ATG	 
lmo2330	2399542	2400243	702	+	2399542	2400243	702	A118 phage	similar to protein gp33 [Bacteriophage A118]	hypothetical protein - RAST_Product: Protein gp33 [Bacteriophage A118]	Protein gp33 [Bacteriophage A118]	Operon_416	Amino acid transport and metabolism	ATG	 
lmo2331	2400264	2400944	681	+	2400264	2400944	681	A118 phage	weakly similar to gp32_Bacteriophage A118 protein	hypothetical protein - RAST_Product: FIG00775112: hypothetical protein	FIG00775112: hypothetical protein	Operon_416	Not in COGs	ATG	 
lmo2332	2401008	2402366	1359	+	2401008	2402366	1359	A118 phage	putative integrase [Bacteriophage A118]	putative integrase	Integrase [Bacteriophage A118]		Replication, recombination and repair	ATG	 
lmo2334	2402888	2403235	348	-	2402888	2403235	348	ORF	similar to transcriptional regulator	hypothetical protein - RAST_Product: DNA-binding protein	DNA-binding protein		Transcription	TTG	 
lmo2335	2403341	2405239	1899	-	2403341	2405239	1899	ORF	highly similar to phosphotransferase system (PTS) fructose-specific enzyme IIABC component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)	PTS system, fructose-specific IIA component (EC 2.7.1.69) / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)	Operon_417	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2336	2405241	2406164	924	-	2405241	2406164	924	ORF		fructose-1-phosphate kinase	1-phosphofructokinase( EC:2.7.1.56 )	Operon_417	Carbohydrate transport and metabolism	ATG	 
lmo2337	2406161	2406913	753	-	2406161	2406913	753	ORF	similar to regulatory protein DeoR family	hypothetical protein - RAST_Product: Transcriptional repressor of the fructose operon, DeoR family	Transcriptional repressor of the fructose operon, DeoR family	Operon_417	"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo2338	2407128	2408453	1326	+	2407128	2408453	1326	ORF		aminopeptidase C	Aminopeptidase C (EC 3.4.22.40)		Amino acid transport and metabolism	ATG	 
lmo2339	2408450	2408893	444	-	2408450	2408893	444	ORF		hypothetical protein - RAST_Product: FIG00774084: hypothetical protein	FIG00774084: hypothetical protein		Function unknown	ATG	 
lmo2340	2408967	2409878	912	-	2408967	2409878	912	ORF	similar to Erwinia chrysanthemi IndA protein	hypothetical protein - RAST_Product: Pseudouridine 5'-phosphate glycosidase	Pseudouridine 5'-phosphate glycosidase	Operon_418	Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo2341	2409875	2410993	1119	-	2409875	2410993	1119	ORF	similar to carbohydrate kinases	hypothetical protein - RAST_Product: Pseudouridine kinase (EC 2.7.1.83)	Pseudouridine kinase (EC 2.7.1.83)	Operon_418	"Transcription; Carbohydrate transport and metabolism;"	GTG	 
lmo2342	2411126	2411827	702	-	2411126	2411827	702	ORF	similar to 16S pseudouridylate synthase	hypothetical protein - RAST_Product: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)		Translation	ATG	 
lmo2343	2411900	2413222	1323	-	2411900	2413222	1323	ORF	similar to nitrilotriacetate monooxygenase	hypothetical protein - RAST_Product: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	Operon_419	Energy production and conversion	ATG	 
lmo2344	2413219	2413485	267	-	2413219	2413485	267	ORF	similar to B. subtilis YtnI protein	hypothetical protein - RAST_Product: glutaredoxin family protein	glutaredoxin family protein	Operon_419	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2345	2413478	2414473	996	-	2413478	2414473	996	ORF		hypothetical protein - RAST_Product: Bacterial luciferase family protein YtmO, in cluster with L-cystine ABC transporter	Bacterial luciferase family protein YtmO, in cluster with L-cystine ABC transporter	Operon_419	Energy production and conversion	ATG	 
lmo2346	2414470	2415249	780	-	2414470	2415249	780	ORF	similar to amino acid ABC-transporter, ATP-binding protein	hypothetical protein - RAST_Product: L-Cystine ABC transporter, ATP-binding protein TcyN	L-Cystine ABC transporter, ATP-binding protein TcyN	Operon_419	Amino acid transport and metabolism	ATG	 
lmo2347	2415246	2415953	708	-	2415246	2415953	708	ORF	similar to amino acid ABC transporter (permease)	hypothetical protein	L-Cystine ABC transporter, permease protein TcyM	Operon_419	Amino acid transport and metabolism	ATG	 
lmo2348	2415967	2416683	717	-	2415967	2416683	717	ORF	similar to amino acid ABC-transporter (permease)	hypothetical protein - RAST_Product: L-Cystine ABC transporter, permease protein TcyL	L-Cystine ABC transporter, permease protein TcyL	Operon_419	Amino acid transport and metabolism	ATG	 
lmo2349	2416705	2417514	810	-	2416705	2417514	810	ORF	similar to amino acid ABC transporter (binding protein)	hypothetical protein - RAST_Product: L-Cystine ABC transporter, periplasmic cystine-binding protein TcyK	L-Cystine ABC transporter, periplasmic cystine-binding protein TcyK	Operon_419	"Amino acid transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2350	2417531	2418067	537	-	2417531	2418067	537	ORF	similar to B. subtilis YtmI protein	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_419	"Transcription; General function prediction only;"	ATG	 
lmo2351	2418083	2418628	546	-	2418083	2418628	546	ORF	similar to NADH-dependent FMN reductase	hypothetical protein - RAST_Product: FMN reductase (EC 1.5.1.29)	FMN reductase (EC 1.5.1.29)	Operon_419	General function prediction only	ATG	 
lmo2352	2418871	2419770	900	+	2418871	2419770	900	ORF	similar to LysR family transcription regulator	hypothetical protein - RAST_Product: HTH-type transcriptional regulator YtlI, LysR family	HTH-type transcriptional regulator YtlI, LysR family		Transcription	TTG	 
lmo2353	2419797	2421749	1953	-	2419797	2421749	1953	ORF	similar to putative Na+/H+ antiporter	hypothetical protein - RAST_Product: Na+/H+ antiporter	Na+/H+ antiporter	Operon_420	Inorganic ion transport and metabolism	ATG	 
lmo2354	2421878	2423476	1599	-	2421878	2423476	1599	ORF		hypothetical protein - RAST_Product: Exoenzymes regulatory protein AepA precursor	Exoenzymes regulatory protein AepA precursor	Operon_420	General function prediction only	ATG	 
lmo2355	2423480	2424721	1242	-	2423480	2424721	1242	ORF	Similar to multidrug resistance protein	hypothetical protein - RAST_Product: Multidrug resistance protein B	Multidrug resistance protein B	Operon_420	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2356	2424922	2425533	612	-	2424922	2425533	612	ORF	lmo2356	hypothetical protein - RAST_Product: FIG00774030: hypothetical protein	FIG00774030: hypothetical protein		Not in COGs	ATG	 
lmo2357	2425723	2426253	531	-	2425723	2426253	531	ORF		hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_421	Function unknown	ATG	 
lmo2358	2426270	2427001	732	-	2426270	2427001	732	ORF	similar to N-acetylglucosamine-6-phosphate isomerase	hypothetical protein - RAST_Product: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Operon_421	Carbohydrate transport and metabolism	ATG	 
lmo2359	2427045	2427890	846	-	2427045	2427890	846	ORF		hypothetical protein - RAST_Product: Cof-like hydrolase	Cof-like hydrolase	Operon_421	General function prediction only	ATG	 
lmo2360	2428010	2430793	2784	-	2428010	2430793	2784	ORF		transmembrane protein	FIG00774521: hypothetical protein	Operon_422	Function unknown	ATG	 
lmo2361	2430826	2431296	471	-	2430826	2431296	471	ORF		hypothetical protein	Rrf2 family transcriptional regulator	Operon_422	Transcription	ATG	 
lmo2362	2431688	2433211	1524	+	2431688	2433211	1524	ORF	similar to amino acid antiporter (acid resistance)	hypothetical protein - RAST_Product: Probable glutamate/gamma-aminobutyrate antiporter	Probable glutamate/gamma-aminobutyrate antiporter		Amino acid transport and metabolism	ATG	 
lmo2363	2433224	2434618	1395	+	2433224	2434618	1395	ORF	similar to glutamate decarboxylase	hypothetical protein - RAST_Product: Glutamate decarboxylase (EC 4.1.1.15)	Glutamate decarboxylase (EC 4.1.1.15)		Amino acid transport and metabolism	ATG	 
lmo2364	2434627	2434866	240	-	2434627	2434866	240	ORF		hypothetical protein	Listeria RofA-like transcriptional regulator	Operon_423	Not in COGs	GTG	 
lmo2365	2435023	2436141	1119	-	2435023	2436141	1119	ORF	similar to S. pyogenes RofA regulatory protein	hypothetical protein - RAST_Product: Listeria RofA-like transcriptional regulator	Listeria RofA-like transcriptional regulator	Operon_423	"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo2366	2443368	2444126	759	-	2443368	2444126	759	ORF	similar to transcription regulator DeoR family	hypothetical protein - RAST_Product: Transcriptional regulator of rhamnose utilization, DeoR family	Transcriptional regulator of rhamnose utilization, DeoR family		"Transcription; Carbohydrate transport and metabolism;"	GTG	 
lmo2367	2444231	2445583	1353	-	2444231	2445583	1353	ORF	"functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family"	glucose-6-phosphate isomerase	Glucose-6-phosphate isomerase (EC 5.3.1.9)		Carbohydrate transport and metabolism	ATG	 
lmo2368	2445685	2446092	408	-	2445685	2446092	408	ORF	lmo2368	hypothetical protein	MutT/nudix family protein		Nucleotide transport and metabolism	GTG	 
lmo2369	2446240	2446593	354	-	2446240	2446593	354	ORF	"similar to B. subtilis general stress protein 13 containing a ribosomal S1 protein domain; induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation"	general stress protein 13	SSU ribosomal protein S1p		Translation	ATG	 
lmo2370	2446747	2447913	1167	+	2446747	2447913	1167	ORF	similar to aminotransferase	hypothetical protein - RAST_Product: Aspartate aminotransferase (EC 2.6.1.1) @ Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	Aspartate aminotransferase (EC 2.6.1.1) @ Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)		Amino acid transport and metabolism	TTG	 
lmo2371	2448052	2449155	1104	+	2448052	2449155	1104	ORF	similar to putative ABC-transporter transmembrane subunit	hypothetical protein - RAST_Product: ABC transporter, permease protein	ABC transporter, permease protein	Operon_424	Defense/virulence mechanisms	ATG	 
lmo2372	2449155	2449835	681	+	2449155	2449835	681	ORF	similar to ABC-transporter ATP binding proteins	hypothetical protein - RAST_Product: ABC transporter ATP-binding protein YvcR	ABC transporter ATP-binding protein YvcR	Operon_424	Defense/virulence mechanisms	ATG	 
lmo2373	2449878	2450192	315	-	2449878	2450192	315	ORF	similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2374	2450437	2451798	1362	+	2450437	2451798	1362	ORF	"similar to aspartate kinase; catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive"	aspartate kinase	Aspartokinase (EC 2.7.2.4)		Amino acid transport and metabolism	ATG	 
lmo2375	2451840	2452235	396	-	2451840	2452235	396	ORF	lmo2375	hypothetical protein - RAST_Product: FIG00774641: hypothetical protein	FIG00774641: hypothetical protein		Not in COGs	GTG	 
lmo2376	2452322	2452906	585	-	2452322	2452906	585	ORF	similar to peptidyl-prolyl cis-trans isomerase	hypothetical protein - RAST_Product: Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2377	2453138	2454349	1212	+	2453138	2454349	1212	ORF	similar to multi-drug resistance efflux pump	hypothetical protein	transporter		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2378	2454695	2457103	2409	+	2454695	2457103	2409	ORF	"similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis; subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali"	monovalent cation/H+ antiporter subunit A	Na(+) H(+) antiporter subunit A	Operon_425	"Energy production and conversion; Inorganic ion transport and metabolism;"	TTG	 
lmo2379	2457087	2457512	426	+	2457087	2457512	426	ORF	"similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis; subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport"	putative monovalent cation/H+ antiporter subunit B	Na(+) H(+) antiporter subunit B	Operon_425	Inorganic ion transport and metabolism	ATG	 
lmo2380	2457512	2457859	348	+	2457512	2457859	348	ORF	"similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis; subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali"	putative monovalent cation/H+ antiporter subunit C	Na(+) H(+) antiporter subunit C	Operon_425	Inorganic ion transport and metabolism	ATG	 
lmo2381	2457852	2459336	1485	+	2457852	2459336	1485	ORF	"similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis; subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone"	putative monovalent cation/H+ antiporter subunit D	Na(+) H(+) antiporter subunit D	Operon_425	"Energy production and conversion; Inorganic ion transport and metabolism;"	ATG	 
lmo2382	2459343	2459822	480	+	2459343	2459822	480	ORF	"similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis; subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali"	putative monovalent cation/H+ antiporter subunit E	Na(+) H(+) antiporter subunit E	Operon_425	Inorganic ion transport and metabolism	ATG	 
lmo2383	2459819	2460106	288	+	2459819	2460106	288	ORF	"similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis; subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali"	putative monovalent cation/H+ antiporter subunit F	Na(+) H(+) antiporter subunit F	Operon_425	Inorganic ion transport and metabolism	ATG	 
lmo2384	2460090	2460683	594	+	2460090	2460683	594	ORF	"similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis; subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali"	putative monovalent cation/H+ antiporter subunit G	Na(+) H(+) antiporter subunit G	Operon_425	Inorganic ion transport and metabolism	GTG	 
lmo2385	2460720	2461091	372	-	2460720	2461091	372	ORF	similar to B. subtilis YuxO protein	hypothetical protein - RAST_Product: thioesterase family protein	thioesterase family protein		Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo2386	2461219	2461692	474	+	2461219	2461692	474	ORF	similar to B. subtilis YuiD protein	hypothetical protein - RAST_Product: membrane protein	membrane protein		Function unknown	ATG	 
lmo2387	2461803	2463029	1227	+	2461803	2463029	1227	ORF		hypothetical protein	FIG00774264: hypothetical protein		Inorganic ion transport and metabolism	GTG	 
lmo2388	2463066	2463884	819	-	2463066	2463884	819	ORF	similar to B. subtilis YwqG protein	hypothetical protein - RAST_Product: FIG00774533: hypothetical protein	FIG00774533: hypothetical protein		Function unknown	ATG	 
lmo2389	2463969	2465180	1212	-	2463969	2465180	1212	ORF	similar to NADH dehydrogenase	hypothetical protein - RAST_Product: NADH dehydrogenase (EC 1.6.99.3)	NADH dehydrogenase (EC 1.6.99.3)		Energy production and conversion	ATG	 
lmo2390	2465630	2466625	996	+	2465630	2466625	996	ORF	similar to hypothetical thioredoxine reductase	hypothetical protein - RAST_Product: Thioredoxin reductase (EC 1.8.1.9)	Thioredoxin reductase (EC 1.8.1.9)		Posttranslational modification, protein turnover, chaperones	TTG	 
lmo2391	2466713	2467342	630	+	2466713	2467342	630	ORF	conserved hypothetical protein similar to B. subtilis YhfK protein	hypothetical protein - RAST_Product: oxidoreductase ylbE	oxidoreductase ylbE		"Cell wall/membrane biogenesis; Carbohydrate transport and metabolism;"	ATG	 
lmo2392	2467388	2467621	234	-	2467388	2467621	234	ORF	similar to B. subtilis YuzB protein	hypothetical protein - RAST_Product: FIG00774402: hypothetical protein	FIG00774402: hypothetical protein	Operon_426	Function unknown	ATG	 
lmo2393	2467643	2467969	327	-	2467643	2467969	327	ORF	similar to B. subtilis YuzD protein	hypothetical protein - RAST_Product: YuzD-like protein	YuzD-like protein	Operon_426	Function unknown	ATG	 
lmo2394	2468210	2468392	183	-	2468210	2468392	183	ORF		hypothetical protein			Not in COGs	TTG	 
lmo2395	2468545	2468703	159	-	2468545	2468703	159	ORF	lmo2395	hypothetical protein - RAST_Product: FIG00775207: hypothetical protein	FIG00775207: hypothetical protein		Not in COGs	ATG	 
lmo2396	2469093	2471915	2823	+	2469093	2471915	2823	ORF	similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo2396 homolog	Internalin-like protein (LPXTG motif) Lmo2396 homolog		Function unknown	ATG	 
lmo2397	2472089	2472325	237	+	2472089	2472325	237	ORF	similar to NifU protein	hypothetical protein - RAST_Product: Nitrogen-fixing NifU domain protein	Nitrogen-fixing NifU domain protein	Operon_427	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2398	2472438	2472938	501	+	2472438	2472938	501	ORF		hypothetical protein - RAST_Product: Low temperature requirement C protein	Low temperature requirement C protein	Operon_427	Lipid transport and metabolism	ATG	 
lmo2399	2472963	2474273	1311	-	2472963	2474273	1311	ORF		hypothetical protein - RAST_Product: CBS-domain containing protein	CBS-domain containing protein	Operon_428	General function prediction only	ATG	 
lmo2400	2474309	2474752	444	-	2474309	2474752	444	ORF	similar to acetyltransferase	hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family	Operon_428	"Transcription; General function prediction only;"	ATG	 
lmo2401	2474801	2475568	768	-	2474801	2475568	768	ORF	similar to conserved hypothetical protein and to B. subtilis YutF protein	hypothetical protein	Hypothetical NagD-like phosphatase	Operon_428	Carbohydrate transport and metabolism	TTG	 
lmo2402	2475588	2475863	276	-	2475588	2475863	276	ORF	similar to B. subtilis YutD protein	hypothetical protein - RAST_Product: Hypothetical DUF1027 domain protein	Hypothetical DUF1027 domain protein	Operon_428	Function unknown	GTG	 
lmo2403	2475860	2477251	1392	-	2475860	2477251	1392	ORF	similar to B. subtilis YunD protein	hypothetical protein	5'-nucleotidase family protein in cluster with NagD-like phosphatase	Operon_428	Nucleotide transport and metabolism	TTG	 
lmo2404	2477385	2478224	840	+	2477385	2478224	840	ORF		hypothetical protein - RAST_Product: FIG00774214: hypothetical protein	FIG00774214: hypothetical protein	Operon_429	General function prediction only	TTG	 
lmo2405	2478225	2478590	366	+	2478225	2478590	366	ORF	lmo2405	hypothetical protein - RAST_Product: FIG00774730: hypothetical protein	FIG00774730: hypothetical protein	Operon_429	Function unknown	ATG	 
lmo2406	2478623	2479465	843	-	2478623	2479465	843	ORF	similar to B. subtilis YunF protein	hypothetical protein - RAST_Product: COG1801: Uncharacterized conserved protein	COG1801: Uncharacterized conserved protein		Function unknown	ATG	 
lmo2407	2479607	2479921	315	-	2479607	2479921	315	ORF	lmo2407	hypothetical protein - RAST_Product: FIG00774515: hypothetical protein	FIG00774515: hypothetical protein		Not in COGs	ATG	 
lmo2408	2480325	2480528	204	+	2480325	2480528	204	ORF	similar to repressor protein	hypothetical protein - RAST_Product: DNA-binding protein	DNA-binding protein		Transcription	GTG	 
lmo2409	2480531	2480944	414	+	2480531	2480944	414	ORF	lmo2409	hypothetical protein - RAST_Product: FIG00775866: hypothetical protein	FIG00775866: hypothetical protein		Not in COGs	ATG	 
lmo2410	2481023	2481574	552	-	2481023	2481574	552	ORF	lmo2410	hypothetical protein - RAST_Product: hypothetical protein	hypothetical protein		Not in COGs	ATG	 
lmo2411	2481732	2483126	1395	-	2481732	2483126	1395	ORF		hypothetical protein - RAST_Product: Iron-sulfur cluster assembly protein SufB	Iron-sulfur cluster assembly protein SufB	Operon_430	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2412	2483149	2483592	444	-	2483149	2483592	444	ORF		hypothetical protein - RAST_Product: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	Operon_430	Energy production and conversion	ATG	 
lmo2413	2483589	2484815	1227	-	2483589	2484815	1227	ORF	similar to aminotransferase	hypothetical protein - RAST_Product: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Operon_430	Amino acid transport and metabolism	ATG	 
lmo2414	2484816	2486117	1302	-	2484816	2486117	1302	ORF	similar to aminotransferase	hypothetical protein - RAST_Product: Iron-sulfur cluster assembly protein SufD	Iron-sulfur cluster assembly protein SufD	Operon_430	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2415	2486136	2486921	786	-	2486136	2486921	786	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Iron-sulfur cluster assembly ATPase protein SufC	Iron-sulfur cluster assembly ATPase protein SufC	Operon_430	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2416	2487261	2488337	1077	+	2487261	2488337	1077	ORF	lmo2416	hypothetical protein - RAST_Product: FIG00774895: hypothetical protein	FIG00774895: hypothetical protein		Not in COGs	ATG	 
lmo2417	2488379	2489209	831	-	2488379	2489209	831	ORF	conserved lipoprotein (putative ABC transporter binding protein)	hypothetical protein - RAST_Product: Methionine ABC transporter substrate-binding protein	Methionine ABC transporter substrate-binding protein	Operon_431	Inorganic ion transport and metabolism	ATG	 
lmo2418	2489274	2489948	675	-	2489274	2489948	675	ORF	similar to ABC transporter, permease protein	hypothetical protein - RAST_Product: Methionine ABC transporter permease protein	Methionine ABC transporter permease protein	Operon_431	Inorganic ion transport and metabolism	ATG	 
lmo2419	2489945	2490967	1023	-	2489945	2490967	1023	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Methionine ABC transporter ATP-binding protein	Methionine ABC transporter ATP-binding protein	Operon_431	Inorganic ion transport and metabolism	ATG	 
lmo2420	2491285	2491473	189	-	2491285	2491473	189	ORF	lmo2420	hypothetical protein - RAST_Product: FIG00774101: hypothetical protein	FIG00774101: hypothetical protein	Operon_432	Not in COGs	ATG	 
lmo2421	2491552	2492694	1143	-	2491552	2492694	1143	ORF	similar to two-component sensor histidine kinase	hypothetical protein	sensor histidine kinase	Operon_432	Signal transduction mechanisms	TTG	 
lmo2422	2492684	2493379	696	-	2492684	2493379	696	ORF	similar to two-component response regulator	hypothetical protein	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	Operon_432	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo2423	2493454	2494329	876	-	2493454	2494329	876	ORF		hypothetical protein - RAST_Product: Cobalt-zinc-cadmium resistance protein	Cobalt-zinc-cadmium resistance protein		Inorganic ion transport and metabolism	ATG	 
lmo2424	2494522	2494806	285	-	2494522	2494806	285	ORF	similar to thioredoxin	hypothetical protein - RAST_Product: FIG00774099: hypothetical protein	FIG00774099: hypothetical protein		"Posttranslational modification, protein turnover, chaperones; Energy production and conversion;"	TTG	 
lmo2425	2494891	2495268	378	-	2494891	2495268	378	ORF	"similar to glycine cleavage system protein H; part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor"	glycine cleavage system protein H	Glycine cleavage system H protein		Amino acid transport and metabolism	ATG	 
lmo2426	2495309	2495662	354	-	2495309	2495662	354	ORF		hypothetical protein - RAST_Product: Arsenate reductase (EC 1.20.4.1)	Arsenate reductase (EC 1.20.4.1)		Inorganic ion transport and metabolism	ATG	 
lmo2427	2495818	2496993	1176	-	2495818	2496993	1176	ORF	similar to cell division proteins RodA, FtsW	hypothetical protein - RAST_Product: Cell division protein FtsW	Cell division protein FtsW		Cell cycle control, mitosis and meiosis	ATG	 
lmo2428	2497069	2498238	1170	-	2497069	2498238	1170	ORF	similar to cell division proteins RodA, FtsW	hypothetical protein - RAST_Product: Cell division protein FtsW	Cell division protein FtsW		Cell cycle control, mitosis and meiosis	ATG	 
lmo2429	2498381	2499172	792	-	2498381	2499172	792	ORF	similar to B. subtilis ferrichrome ABC transporter (ATP-binding protein) FhuC	hypothetical protein - RAST_Product: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)		"Inorganic ion transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo2430	2499169	2500179	1011	-	2499169	2500179	1011	ORF	similar to B. subtilis ferrichrome ABC transporter (permease) FhuG	hypothetical protein - RAST_Product: ABC-type Fe3+-siderophore transport system, permease component	ABC-type Fe3+-siderophore transport system, permease component		Inorganic ion transport and metabolism	ATG	 
lmo2431	2500179	2501150	972	-	2500179	2501150	972	ORF	similar to B. subtilis ferrichrome ABC transporter fhuD precursor (ferrichrome-binding protein)	hypothetical protein - RAST_Product: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)		Inorganic ion transport and metabolism	ATG	 
lmo2432	2501306	2501470	165	+	2501306	2501470	165	ORF	lmo2432	hypothetical protein - RAST_Product: FIG00774636: hypothetical protein	FIG00774636: hypothetical protein		Not in COGs	ATG	 
lmo2433	2501603	2502361	759	+	2501603	2502361	759	ORF	similar to acetylesterase	hypothetical protein - RAST_Product: putative esterase	putative esterase		General function prediction only	TTG	 
lmo2434	2502401	2503804	1404	-	2502401	2503804	1404	ORF	highly similar to glutamate decarboxylases	hypothetical protein - RAST_Product: Glutamate decarboxylase (EC 4.1.1.15)	Glutamate decarboxylase (EC 4.1.1.15)		Amino acid transport and metabolism	ATG	 
lmo2435	2503931	2504236	306	+	2503931	2504236	306	ORF	similar to B. subtilis YfhL protein	hypothetical protein - RAST_Product: FIG00774157: hypothetical protein	FIG00774157: hypothetical protein		Function unknown	ATG	 
lmo2436	2504300	2505157	858	-	2504300	2505157	858	ORF	similar to transcription antiterminator	hypothetical protein	Beta-glucoside bgl operon antiterminator, BglG family		Transcription	ATG	 
lmo2437	2505425	2505835	411	+	2505425	2505835	411	ORF	lmo2437	hypothetical protein - RAST_Product: FIG00774650: hypothetical protein	FIG00774650: hypothetical protein		General function prediction only	ATG	 
lmo2438	2505858	2506370	513	-	2505858	2506370	513	ORF	lmo2438	hypothetical protein - RAST_Product: FIG00774362: hypothetical protein	FIG00774362: hypothetical protein		Function unknown	ATG	 
lmo2439	2506494	2506835	342	+	2506494	2506835	342	ORF	lmo2439	hypothetical protein - RAST_Product: FIG00774520: hypothetical protein	FIG00774520: hypothetical protein		Function unknown	ATG	 
lmo2440	2506867	2507250	384	-	2506867	2507250	384	ORF	lmo2440	hypothetical protein - RAST_Product: FIG00774812: hypothetical protein	FIG00774812: hypothetical protein	Operon_433	Function unknown	ATG	 
lmo2441	2507306	2508202	897	-	2507306	2508202	897	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, DeoR family	Transcriptional regulator, DeoR family	Operon_433	Transcription	GTG	 
lmo2442	2508247	2508816	570	-	2508247	2508816	570	ORF	lmo2442	hypothetical protein - RAST_Product: FIG00774622: hypothetical protein	FIG00774622: hypothetical protein		Function unknown	ATG	 
lmo2443	2508992	2509411	420	-	2508992	2509411	420	ORF	lmo2443	hypothetical protein - RAST_Product: FIG00774986: hypothetical protein	FIG00774986: hypothetical protein		Not in COGs	ATG	 
lmo2444	2510361	2514293	3933	-	2510361	2514293	3933	ORF	similar to glycosidase	hypothetical protein	alpha-glucosidase		Carbohydrate transport and metabolism	ATG	 
lmo2445	2514308	2515210	903	-	2514308	2515210	903	ORF	similar to internalin	hypothetical protein	Internalin-like protein Lmo2445 homolog		Function unknown	ATT	 
lmo2446	2515312	2518587	3276	-	2515312	2518587	3276	ORF	similar to glycosidase	hypothetical protein - RAST_Product: glycosyl hydrolase, family 31	glycosyl hydrolase, family 31		Carbohydrate transport and metabolism	ATG	 
lmo2447	2518971	2519879	909	+	2518971	2519879	909	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: transcriptional activator	transcriptional activator		Transcription	ATG	 
lmo2448	2519935	2520399	465	-	2519935	2520399	465	ORF	"binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation"	SsrA-binding protein	tmRNA-binding protein SmpB	Operon_434	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2449	2520415	2522796	2382	-	2520415	2522796	2382	ORF	similar to exoribonuclease RNase-R	hypothetical protein - RAST_Product: 3'-to-5' exoribonuclease RNase R	3'-to-5' exoribonuclease RNase R	Operon_434	Transcription	GTG	 
lmo2450	2522830	2523576	747	-	2522830	2523576	747	ORF	similar to carboxylesterase	hypothetical protein - RAST_Product: Carboxylesterase (EC 3.1.1.1)	Carboxylesterase (EC 3.1.1.1)	Operon_434	General function prediction only	ATG	 
lmo2451	2523835	2524068	234	-	2523835	2524068	234	ORF	similar to preprotein translocase subunit SecG	preprotein translocase subunit SecG	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	Operon_434	Intracellular trafficking and secretion	ATG	 
lmo2452	2524168	2524911	744	-	2524168	2524911	744	ORF	similar to carboxylesterase	hypothetical protein - RAST_Product: Carboxylesterase (EC 3.1.1.1)	Carboxylesterase (EC 3.1.1.1)	Operon_434	General function prediction only	ATG	 
lmo2453	2525094	2525813	720	-	2525094	2525813	720	ORF	similar to lipolytic enzyme	hypothetical protein - RAST_Product: Menaquinone biosynthesis related protein MenX	Menaquinone biosynthesis related protein MenX	Operon_434	General function prediction only	ATG	 
lmo2454	2525946	2526119	174	-	2525946	2526119	174	ORF	lmo2454	hypothetical protein	hypothetical protein	Operon_434	Not in COGs	ATG	 
lmo2455	2526222	2527514	1293	-	2526222	2527514	1293	ORF	"highly similar to enolase; enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis"	phosphopyruvate hydratase	Enolase (EC 4.2.1.11)	Operon_435	Carbohydrate transport and metabolism	ATG	 
lmo2456	2527650	2529182	1533	-	2527650	2529182	1533	ORF	"highly similar to phosphoglycerate mutase; catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate"	phosphoglyceromutase	2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)	Operon_435	Carbohydrate transport and metabolism	ATG	 
lmo2457	2529184	2529939	756	-	2529184	2529939	756	ORF	"highly similar to triose phosphate isomerase; Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate"	triosephosphate isomerase	Triosephosphate isomerase (EC 5.3.1.1)	Operon_435	Carbohydrate transport and metabolism	ATG	 
lmo2458	2529985	2531175	1191	-	2529985	2531175	1191	ORF	"highly similar to phosphoglycerate kinase; Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway"	phosphoglycerate kinase	Phosphoglycerate kinase (EC 2.7.2.3)	Operon_435	Carbohydrate transport and metabolism	ATG	 
lmo2459	2531310	2532320	1011	-	2531310	2532320	1011	ORF	"highly similar to glyceraldehyde 3-phosphate dehydrogenase; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate"	glyceraldehyde-3-phosphate dehydrogenase	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Operon_435	Carbohydrate transport and metabolism	ATG	 
lmo2460	2532352	2533398	1047	-	2532352	2533398	1047	ORF	similar to B. subtilis CggR hypothetical transcriptional regulator	hypothetical protein - RAST_Product: transcriptional regulator, putative	transcriptional regulator, putative	Operon_435	Transcription	ATG	 
lmo2461	2533840	2535183	1344	-	2533840	2535183	1344	ORF	"sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen"	RNA polymerase factor sigma-54	RNA polymerase sigma-54 factor RpoN		Transcription	GTG	 
lmo2462	2535342	2536268	927	-	2535342	2536268	927	ORF	similar to dipeptidases	hypothetical protein - RAST_Product: dipeptidase	dipeptidase		Amino acid transport and metabolism	ATG	 
lmo2463	2536347	2538581	2235	-	2536347	2538581	2235	ORF	similar to transport protein	hypothetical protein	FIG00774322: hypothetical protein	Operon_436	General function prediction only	GTG	 
lmo2464	2538588	2539196	609	-	2538588	2539196	609	ORF	similar to transcription regulator	hypothetical protein	Transcriptional regulator, TetR family	Operon_436	Transcription	ATG	 
lmo2465	2539213	2539611	399	-	2539213	2539611	399	ORF	lmo2465	hypothetical protein - RAST_Product: FIG00774204: hypothetical protein	FIG00774204: hypothetical protein	Operon_436	Not in COGs	TTG	 
lmo2466	2539838	2540173	336	+	2539838	2540173	336	ORF	lmo2466	hypothetical protein	hypothetical protein		Function unknown	ATG	 
lmo2467	2540421	2541857	1437	-	2540421	2541857	1437	ORF	similar to chitinase and chitin binding protein	hypothetical protein - RAST_Product: Chitin binding protein	Chitin binding protein		"General function prediction only; Function unknown;"	ATG	 
lmo2468	2542014	2542610	597	+	2542014	2542610	597	ORF	"hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates"	ATP-dependent Clp protease proteolytic subunit	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)		"Posttranslational modification, protein turnover, chaperones; Intracellular trafficking and secretion;"	ATG	 
lmo2469	2542658	2544049	1392	-	2542658	2544049	1392	ORF	similar to amino acid transporter	hypothetical protein - RAST_Product: Amino acid permease	Amino acid permease		Amino acid transport and metabolism	ATG	 
lmo2470	2544267	2545433	1167	+	2544267	2545433	1167	ORF	similar to internalin proteins	hypothetical protein - RAST_Product: Internalin-like protein Lmo2470 homolog	Internalin-like protein Lmo2470 homolog		Function unknown	TTG	 
lmo2471	2545487	2546503	1017	-	2545487	2546503	1017	ORF	"similar to NADH oxidase; catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds"	NADPH dehydrogenase NamA	NADH:flavin oxidoreductase	Operon_437	Energy production and conversion	ATG	 
lmo2472	2546530	2547501	972	-	2546530	2547501	972	ORF		hypothetical protein - RAST_Product: FIG001886: Cytoplasmic hypothetical protein	FIG001886: Cytoplasmic hypothetical protein	Operon_437	Function unknown	ATG	 
lmo2473	2547509	2548477	969	-	2547509	2548477	969	ORF		hypothetical protein - RAST_Product: FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like	FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like	Operon_437	Function unknown	ATG	 
lmo2474	2548479	2549354	876	-	2548479	2549354	876	ORF		hypothetical protein - RAST_Product: FIG000506: Predicted P-loop-containing kinase	FIG000506: Predicted P-loop-containing kinase	Operon_437	General function prediction only	ATG	 
lmo2475	2549462	2551192	1731	-	2549462	2551192	1731	ORF	similar to phosphomannomutase and phosphoglucomutase	hypothetical protein - RAST_Product: Phosphomannomutase (EC 5.4.2.8)	Phosphomannomutase (EC 5.4.2.8)	Operon_438	Carbohydrate transport and metabolism	ATG	 
lmo2476	2551234	2552295	1062	-	2551234	2552295	1062	ORF	similar to aldose 1-epimerase (mutarotase)	hypothetical protein - RAST_Product: Aldose 1-epimerase (EC 5.1.3.3)	Aldose 1-epimerase (EC 5.1.3.3)	Operon_438	Carbohydrate transport and metabolism	GTG	 
lmo2477	2552312	2553295	984	-	2552312	2553295	984	ORF		UDP-glucose 4-epimerase	UDP-glucose 4-epimerase (EC 5.1.3.2)	Operon_438	Cell wall/membrane biogenesis	ATG	 
lmo2478	2553414	2554373	960	-	2553414	2554373	960	ORF		thioredoxin reductase	Thioredoxin reductase (EC 1.8.1.9)	Operon_439	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2479	2554452	2555927	1476	-	2554452	2555927	1476	ORF	lmo2479	hypothetical protein - RAST_Product: TPR domain protein	TPR domain protein	Operon_439	General function prediction only	ATG	 
lmo2480	2556013	2556510	498	-	2556013	2556510	498	ORF	similar to acetyltransferase	hypothetical protein	acetyltransferase	Operon_440	General function prediction only	TTG	 
lmo2481	2556514	2557167	654	-	2556514	2557167	654	ORF	"similar to B. subtilis P-Ser-HPr phosphatase; hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation"	pyrophosphatase PpaX	Inorganic pyrophospatase PpaX (EC 3.1.3.18)	Operon_440	General function prediction only	ATG	 
lmo2482	2557211	2558044	834	-	2557211	2558044	834	ORF	"highly similar to prolipoprotein diacylglyceryl transferase; transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein"	prolipoprotein diacylglyceryl transferase	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	Operon_440	Cell wall/membrane biogenesis	ATG	 
lmo2483	2558130	2559068	939	-	2558130	2559068	939	ORF	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system	HPr kinase/phosphorylase	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Operon_440	Signal transduction mechanisms	ATG	 
lmo2484	2559255	2559608	354	-	2559255	2559608	354	ORF	similar to B. subtilis YvlD protein	hypothetical protein - RAST_Product: membrane protein	membrane protein	Operon_441	Function unknown	ATG	 
lmo2485	2559617	2559817	201	-	2559617	2559817	201	ORF	similar to B. subtilis yvlC protein	hypothetical protein - RAST_Product: PspC domain protein, truncated	PspC domain protein, truncated	Operon_441	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo2486	2559841	2561052	1212	-	2559841	2561052	1212	ORF	lmo2486	hypothetical protein - RAST_Product: FIG00774998: hypothetical protein	FIG00774998: hypothetical protein	Operon_441	"Transcription; Signal transduction mechanisms; Function unknown;"	ATG	 
lmo2487	2561120	2562382	1263	-	2561120	2562382	1263	ORF	similar to B. subtilis YvlB protein	hypothetical protein - RAST_Product: Hypothetical protein, homolog of fig|393130.3.peg.2627	Hypothetical protein, homolog of fig|393130.3.peg.2627	Operon_441	Function unknown	ATG	 
lmo2488	2562591	2565461	2871	-	2562591	2565461	2871	ORF	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate	excinuclease ABC subunit A	Excinuclease ABC subunit A	Operon_442	Replication, recombination and repair	TTG	 
lmo2489	2565469	2567445	1977	-	2565469	2567445	1977	ORF	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion	excinuclease ABC subunit B	Excinuclease ABC subunit B	Operon_442	Replication, recombination and repair	TTG	 
lmo2490	2567696	2567935	240	-	2567696	2567935	240	ORF	similar to B. subtilis CsbA protein	hypothetical protein - RAST_Product: FIG00774798: hypothetical protein	FIG00774798: hypothetical protein	Operon_443	Function unknown	ATG	 
lmo2491	2567956	2568603	648	-	2567956	2568603	648	ORF	lmo2491	hypothetical protein - RAST_Product: Nucleotidase YfbR, HD superfamily	Nucleotidase YfbR, HD superfamily	Operon_443	General function prediction only	ATG	 
lmo2492	2568625	2569011	387	-	2568625	2569011	387	ORF	lmo2492	hypothetical protein - RAST_Product: FIG00774298: hypothetical protein	FIG00774298: hypothetical protein	Operon_443	Not in COGs	TTG	 
lmo2493	2569117	2569422	306	-	2569117	2569422	306	ORF	similar to transcription regulator ArsR family	hypothetical protein - RAST_Product: Transcriptional regulator, ArsR family	Transcriptional regulator, ArsR family	Operon_443	Transcription	ATG	 
lmo2494	2569690	2570349	660	-	2569690	2570349	660	ORF	similar to negative regulator of phosphate regulon	hypothetical protein - RAST_Product: Phosphate transport system regulatory protein PhoU	Phosphate transport system regulatory protein PhoU		Inorganic ion transport and metabolism	ATG	 
lmo2495	2570362	2571141	780	-	2570362	2571141	780	ORF	"similar to phosphate ABC transporter (ATP-binding protein); ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation"	phosphate transporter ATP-binding protein	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)		Inorganic ion transport and metabolism	ATG	 
lmo2496	2571156	2571971	816	-	2571156	2571971	816	ORF	"similar to phosphate ABC transporter (ATP-binding protein); ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation"	phosphate transporter ATP-binding protein	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)		Inorganic ion transport and metabolism	ATG	 
lmo2497	2571999	2572883	885	-	2571999	2572883	885	ORF	similar to phosphate ABC transporter (permease protein)	hypothetical protein - RAST_Product: Phosphate transport system permease protein PstA (TC 3.A.1.7.1)	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)		Inorganic ion transport and metabolism	ATG	 
lmo2498	2572880	2573803	924	-	2572880	2573803	924	ORF	similar to phosphate ABC transporter (permease protein)	hypothetical protein	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)		Inorganic ion transport and metabolism	TTG	 
lmo2499	2573897	2574805	909	-	2573897	2574805	909	ORF	similar to phosphate ABC transporter (binding protein)	hypothetical protein - RAST_Product: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)		Inorganic ion transport and metabolism	ATG	 
lmo2500	2575061	2576836	1776	-	2575061	2576836	1776	ORF		two-component sensor histidine kinase	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)	Operon_444	Signal transduction mechanisms	ATG	 
lmo2501	2576836	2577546	711	-	2576836	2577546	711	ORF		two-component response phosphate regulator	Alkaline phosphatase synthesis transcriptional regulatory protein PhoP	Operon_444	"Transcription; Signal transduction mechanisms;"	TTG	 
lmo2502	2577696	2578871	1176	-	2577696	2578871	1176	ORF	lmo2502	hypothetical protein - RAST_Product: Cell division topological determinant MinJ	Cell division topological determinant MinJ	Operon_445	Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2503	2578899	2580347	1449	-	2578899	2580347	1449	ORF	similar to cardiolipin synthase	hypothetical protein - RAST_Product: Cardiolipin synthetase (EC 2.7.8.-)	Cardiolipin synthetase (EC 2.7.8.-)	Operon_445	Lipid transport and metabolism	ATG	 
lmo2504	2580470	2581780	1311	-	2580470	2581780	1311	ORF	similar to cell wall binding proteins	hypothetical protein - RAST_Product: peptidoglycan lytic protein P45	peptidoglycan lytic protein P45		"Cell wall/membrane biogenesis; Function unknown;"	ATG	 
lmo2505	2581900	2583105	1206	-	2581900	2583105	1206	ORF		peptidoglycan lytic protein P45	NLP/P60 family protein	Operon_446	"Cell wall/membrane biogenesis; Function unknown;"	TTG	 
lmo2506	2583181	2584065	885	-	2583181	2584065	885	ORF	highly similar to cell-division protein FtsX	hypothetical protein - RAST_Product: Cell division protein FtsX	Cell division protein FtsX	Operon_446	Cell cycle control, mitosis and meiosis	ATG	 
lmo2507	2584055	2584741	687	-	2584055	2584741	687	ORF	highly similar to the cell-division ATP-binding protein FtsE	hypothetical protein - RAST_Product: Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	Operon_446	Cell cycle control, mitosis and meiosis	ATG	 
lmo2508	2585245	2586108	864	-	2585245	2586108	864	ORF		hypothetical protein - RAST_Product: hypothetical protein BH3604	hypothetical protein BH3604	Operon_447	Function unknown	ATG	 
lmo2509	2586114	2587097	984	-	2586114	2587097	984	ORF	"highly similar to peptide chain release factor 2; recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1"	peptide chain release factor 2	"Peptide chain release factor 2; programmed frameshift-containing"	Operon_447	Translation	ATG	 
lmo2510	2587300	2589813	2514	-	2587300	2589813	2514	ORF	"functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins"	preprotein translocase subunit SecA	Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)		Intracellular trafficking and secretion	ATG	 
lmo2511	2590044	2590607	564	-	2590044	2590607	564	ORF	similar to conserved hypothetical proteins like to B. subtilis YvyD protein	hypothetical protein - RAST_Product: Ribosomal subunit interface protein	Ribosomal subunit interface protein		Translation	ATG	 
lmo2512	2590802	2591458	657	-	2590802	2591458	657	ORF	similar to late competence protein comFC	hypothetical protein - RAST_Product: ComF operon protein C	ComF operon protein C		General function prediction only	ATG	 
lmo2513	2591451	2592770	1320	-	2591451	2592770	1320	ORF	similar to late competence protein comFA	hypothetical protein	ComF operon protein A, DNA transporter ATPase		Replication, recombination and repair	ATG	 
lmo2514	2592965	2593816	852	-	2592965	2593816	852	ORF	similar to B. subtilis YviA (DegV) protein	hypothetical protein - RAST_Product: FIG005590: DegV family protein	FIG005590: DegV family protein	Operon_448	Function unknown	ATG	 
lmo2515	2593837	2594523	687	-	2593837	2594523	687	ORF	similar to B. subtilis two-component response regulator DegU	hypothetical protein - RAST_Product: Transcriptional regulator DegU, LuxR family	Transcriptional regulator DegU, LuxR family	Operon_448	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo2516	2594908	2595543	636	+	2594908	2595543	636	ORF		hypothetical protein - RAST_Product: FIG000605: protein co-occurring with transport systems (COG1739)	FIG000605: protein co-occurring with transport systems (COG1739)	Operon_449	Function unknown	ATG	 
lmo2517	2595485	2596090	606	+	2595485	2596090	606	ORF	lmo2517	hypothetical protein	FIG009148: Acetyltransferase, GNAT family	Operon_449	Translation	ATG	 
lmo2518	2596266	2597324	1059	+	2596266	2597324	1059	ORF	similar to B. subtilis putative transcriptional regulator LytR	hypothetical protein - RAST_Product: Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 (as in PMID19099556)	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 (as in PMID19099556)		Transcription	ATG	 
lmo2519	2597363	2598415	1053	-	2597363	2598415	1053	ORF	similar to B. subtilis TagO teichoic acid linkage unit synthesis protein	hypothetical protein	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	Operon_450	Cell wall/membrane biogenesis	TTG	 
lmo2520	2598423	2599547	1125	-	2598423	2599547	1125	ORF	similar to B. subtilis O-succinylbenzoate-CoA synthase (MenC)	hypothetical protein - RAST_Product: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)	O-succinylbenzoate-CoA synthase (EC 4.2.1.-)	Operon_450	"Cell wall/membrane biogenesis; General function prediction only;"	ATG	 
lmo2521	2599548	2600282	735	-	2599548	2600282	735	ORF	similar to B. subtilis TagA protein involved in polyglycerol phosphate biosynthesis	hypothetical protein - RAST_Product: N-acetylmannosaminyltransferase (EC 2.4.1.187)	N-acetylmannosaminyltransferase (EC 2.4.1.187)	Operon_450	Cell wall/membrane biogenesis	ATG	 
lmo2522	2600408	2601241	834	-	2600408	2601241	834	ORF	similar to hypothetical cell wall binding protein from B. subtilis	hypothetical protein - RAST_Product: Cell wall-binding protein	Cell wall-binding protein		"Cell wall/membrane biogenesis; Function unknown;"	ATG	 
lmo2523	2601632	2601997	366	-	2601632	2601997	366	ORF	similar to single-strand DNA-binding protein	hypothetical protein - RAST_Product: Single-stranded DNA-binding protein	Single-stranded DNA-binding protein		Replication, recombination and repair	ATG	 
lmo2524	2602249	2602683	435	-	2602249	2602683	435	ORF	"similar to hydroxymyristoyl-(acyl carrier protein) dehydratase; in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP"	(3R)-hydroxymyristoyl-ACP dehydratase	(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-)	Operon_451	Lipid transport and metabolism	ATG	 
lmo2525	2602705	2603700	996	-	2602705	2603700	996	ORF	similar to MreB-like protein	rod shape-determining protein MreB	mbl	Operon_451	Cell cycle control, mitosis and meiosis	ATG	 
lmo2526	2603863	2605155	1293	-	2603863	2605155	1293	ORF	"adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active"	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)		Cell wall/membrane biogenesis	TTG	 
lmo2527	2605337	2605573	237	-	2605337	2605573	237	ORF	similar to B. subtilis YwzB protein	hypothetical protein - RAST_Product: FIG00774319: hypothetical protein	FIG00774319: hypothetical protein		Function unknown	ATG	 
lmo2528	2605697	2606101	405	-	2605697	2606101	405	ORF	"highly similar to H+-transporting ATP synthase chain epsilon; part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane"	F0F1 ATP synthase subunit epsilon	ATP synthase epsilon chain (EC 3.6.3.14)	Operon_452	Energy production and conversion	ATG	 
lmo2529	2606123	2607544	1422	-	2606123	2607544	1422	ORF	"highly similar to H+-transporting ATP synthase chain beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit"	F0F1 ATP synthase subunit beta	ATP synthase beta chain (EC 3.6.3.14)	Operon_452	Energy production and conversion	ATG	 
lmo2530	2607605	2608477	873	-	2607605	2608477	873	ORF	"highly similar to H+-transporting ATP synthase chain gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit"	F0F1 ATP synthase subunit gamma	ATP synthase gamma chain (EC 3.6.3.14)	Operon_452	Energy production and conversion	TTG	 
lmo2531	2608515	2610029	1515	-	2608515	2610029	1515	ORF	"highly similar to H+-transporting ATP synthase chain alpha; produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit"	F0F1 ATP synthase subunit alpha	ATP synthase alpha chain (EC 3.6.3.14)	Operon_452	Energy production and conversion	ATG	 
lmo2532	2610056	2610595	540	-	2610056	2610595	540	ORF	"highly similar to H+-transporting ATP synthase chain delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex"	F0F1 ATP synthase subunit delta	ATP synthase delta chain (EC 3.6.3.14)	Operon_452	Energy production and conversion	ATG	 
lmo2533	2610592	2611104	513	-	2610592	2611104	513	ORF	"highly similar to H+-transporting ATP synthase chain b; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel"	F0F1 ATP synthase subunit B	ATP synthase B chain (EC 3.6.3.14)	Operon_452	Energy production and conversion	GTG	 
lmo2534	2611192	2611410	219	-	2611192	2611410	219	ORF	"highly similar to H+-transporting ATP synthase chain c; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0"	F0F1 ATP synthase subunit C	ATP synthase C chain (EC 3.6.3.14)	Operon_452	Energy production and conversion	ATG	 
lmo2535	2611482	2612198	717	-	2611482	2612198	717	ORF	"highly similar to H+-transporting ATP synthase chain a; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0"	F0F1 ATP synthase subunit A	ATP synthase A chain (EC 3.6.3.14)	Operon_452	Energy production and conversion	TTG	 
lmo2536	2612205	2612603	399	-	2612205	2612603	399	ORF	highly similar to ATP synthase subunit i	hypothetical protein	FIG048548: ATP synthase protein I2	Operon_452	Not in COGs	ATG	 
lmo2537	2613435	2614574	1140	-	2613435	2614574	1140	ORF	similar to UDP-N-acetylglucosamine 2-epimerase	hypothetical protein - RAST_Product: UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	Operon_453	Cell wall/membrane biogenesis	TTG	 
lmo2538	2614692	2615321	630	-	2614692	2615321	630	ORF	"highly similar to uracil phosphoribosyltransferase; Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate"	uracil phosphoribosyltransferase	Uracil phosphoribosyltransferase (EC 2.4.2.9)	Operon_453	Nucleotide transport and metabolism	ATG	 
lmo2539	2615458	2616699	1242	-	2615458	2616699	1242	ORF	"highly similar to glycine hydroxymethyltransferase; catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate"	serine hydroxymethyltransferase	Serine hydroxymethyltransferase (EC 2.1.2.1)		Amino acid transport and metabolism	ATG	 
lmo2540	2616835	2617242	408	-	2616835	2617242	408	ORF	similar to phosphatases	hypothetical protein - RAST_Product: Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	Operon_454	Signal transduction mechanisms	ATG	 
lmo2541	2617239	2618276	1038	-	2617239	2618276	1038	ORF	similar to yeast translation initiation protein	hypothetical protein - RAST_Product: COG0009 Sua5 subfamily, required for N6-threonylcarbamoyl adenosine t(6)A37 modification in tRNA	COG0009 Sua5 subfamily, required for N6-threonylcarbamoyl adenosine t(6)A37 modification in tRNA	Operon_454	Translation	ATG	 
lmo2542	2618577	2619428	852	-	2618577	2619428	852	ORF	similar to protoporphyrinogen oxidase	hypothetical protein - RAST_Product: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	Operon_455	Translation	ATG	 
lmo2543	2619415	2620491	1077	-	2619415	2620491	1077	ORF	"highly similar to peptide chain release factor 1; recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2"	peptide chain release factor 1	Peptide chain release factor 1	Operon_455	Translation	ATG	 
lmo2544	2620514	2621089	576	-	2620514	2621089	576	ORF	"similar to thymidine kinase; catalyzes the formation of thymidine 5'-phosphate from thymidine"	thymidine kinase	Thymidine kinase (EC 2.7.1.21)	Operon_455	Nucleotide transport and metabolism	ATG	 
lmo2545	2621201	2622067	867	-	2621201	2622067	867	ORF	"highly similar to homoserine kinase; catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate"	homoserine kinase	Homoserine kinase (EC 2.7.1.39)	Operon_456	Amino acid transport and metabolism	ATG	 
lmo2546	2622067	2623122	1056	-	2622067	2623122	1056	ORF	"highly similar to threonine synthase; catalyzes the formation of L-threonine from O-phospho-L-homoserine"	threonine synthase	Threonine synthase (EC 4.2.3.1)	Operon_456	Amino acid transport and metabolism	ATG	 
lmo2547	2623125	2624411	1287	-	2623125	2624411	1287	ORF	"highly similar to homoserine dehydrogenase; catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine"	homoserine dehydrogenase	Homoserine dehydrogenase (EC 1.1.1.3)	Operon_456	Amino acid transport and metabolism	GTG	 
lmo2548	2624633	2624878	246	-	2624633	2624878	246	ORF	"RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome"	50S ribosomal protein L31 type B	LSU ribosomal protein L31p		Translation	ATG	 
lmo2549	2624980	2625417	438	-	2624980	2625417	438	ORF		wall teichoic acid glycosylation protein GtcA	cell wall teichoic acid glycosylation protein GtcA		Function unknown	ATG	 
lmo2550	2625414	2626361	948	-	2625414	2626361	948	ORF	similar to glycosyl transferases	hypothetical protein - RAST_Product: Dolichol-phosphate mannosyltransferase MtrA	Dolichol-phosphate mannosyltransferase MtrA	Operon_457	Cell wall/membrane biogenesis	ATG	 
lmo2551	2626442	2627713	1272	-	2626442	2627713	1272	ORF	"highly similar to transcription terminator factor rho; An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes"	transcription termination factor Rho	Transcription termination factor Rho	Operon_457	Transcription	ATG	 
lmo2552	2627816	2629087	1272	-	2627816	2629087	1272	ORF	"highly similar to UDP-N-acetylglucosamine 1-carboxyvinyltransferase; adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active"	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	Operon_458	Cell wall/membrane biogenesis	GTG	 
lmo2553	2629208	2630278	1071	-	2629208	2630278	1071	ORF		hypothetical protein - RAST_Product: Integral membrane protein LafC, accessory function in glycolipid and LTA synthesis	Integral membrane protein LafC, accessory function in glycolipid and LTA synthesis	Operon_458	Function unknown	ATG	 
lmo2554	2630285	2631310	1026	-	2630285	2631310	1026	ORF	similar to galactosyltransferase	hypothetical protein	Glycosyltransferase LafB, responsible for the formation of Gal-Glc-DAG	Operon_458	Cell wall/membrane biogenesis	GTG	 
lmo2555	2631303	2632586	1284	-	2631303	2632586	1284	ORF	weakly similar to human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein	hypothetical protein - RAST_Product: Glycosyltransferase LafA, responsible for the formation of Glc-DAG	Glycosyltransferase LafA, responsible for the formation of Glc-DAG	Operon_458	Cell wall/membrane biogenesis	ATG	 
lmo2556	2632907	2633761	855	-	2632907	2633761	855	ORF	similar to fructose-1,6-bisphosphate aldolase	hypothetical protein - RAST_Product: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)		Carbohydrate transport and metabolism	ATG	 
lmo2557	2633930	2634850	921	-	2633930	2634850	921	ORF	similar to YegS from E. coli	putative lipid kinase	Transcription regulator [contains diacylglycerol kinase catalytic domain]		"Lipid transport and metabolism; General function prediction only;"	TTG	 
lmo2558	2635167	2637920	2754	+	2635167	2637920	2754	ORF		autolysin, amidase	Internalin B (GW modules)		Cell wall/membrane biogenesis	TTG	 
lmo2559	2637964	2639562	1599	-	2637964	2639562	1599	ORF	"CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer"	CTP synthetase	CTP synthase (EC 6.3.4.2)		Nucleotide transport and metabolism	ATG	 
lmo2560	2639930	2640466	537	-	2639930	2640466	537	ORF	"similar to B. subtilis RNA polymerase delta subunit; participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling"	DNA-directed RNA polymerase subunit delta	DNA-directed RNA polymerase delta subunit (EC 2.7.7.6)	Operon_459	Transcription	TTG	 
lmo2561	2640832	2642502	1671	-	2640832	2642502	1671	ORF	"catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase"	arginyl-tRNA synthetase	Arginyl-tRNA synthetase (EC 6.1.1.19)	Operon_459	Translation	ATG	 
lmo2562	2642499	2642948	450	-	2642499	2642948	450	ORF	lmo2562	hypothetical protein - RAST_Product: hypothetical fig|282458.1.peg.583 homolog	hypothetical fig|282458.1.peg.583 homolog	Operon_459	Function unknown	ATG	 
lmo2563	2643026	2643679	654	-	2643026	2643679	654	ORF		hypothetical protein - RAST_Product: FIG004556: membrane metalloprotease	FIG004556: membrane metalloprotease		General function prediction only	ATG	 
lmo2564	2643753	2643938	186	+	2643753	2643938	186	ORF	similar to 4-oxalocrotonate isomerase	"hypothetical protein - RAST_Product: 4-oxalocrotonate tautomerase (EC 5.3.2.-); Xylose transport system permease protein xylH"	"4-oxalocrotonate tautomerase (EC 5.3.2.-); Xylose transport system permease protein xylH"		General function prediction only	ATG	 
lmo2565	2643973	2645295	1323	-	2643973	2645295	1323	ORF		hypothetical protein - RAST_Product: dNTP triphosphohydrolase, putative	dNTP triphosphohydrolase, putative	Operon_460	General function prediction only	ATG	 
lmo2566	2645310	2646146	837	-	2645310	2646146	837	ORF	lmo2566	hypothetical protein - RAST_Product: Lipoate-protein ligase A	Lipoate-protein ligase A	Operon_460	Coenzyme transport and metabolism	ATG	 
lmo2567	2646464	2646664	201	-	2646464	2646664	201	ORF	lmo2567	hypothetical protein - RAST_Product: FIG00774296: hypothetical protein	FIG00774296: hypothetical protein		Not in COGs	ATG	 
lmo2568	2646686	2647009	324	-	2646686	2647009	324	ORF	lmo2568	hypothetical protein - RAST_Product: FIG00774092: hypothetical protein	FIG00774092: hypothetical protein		Not in COGs	ATG	 
lmo2569	2647164	2648825	1662	-	2647164	2648825	1662	ORF	similar to dipeptide ABC transporter (dipeptide-binding protein)	hypothetical protein - RAST_Product: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)		Amino acid transport and metabolism	TTG	 
lmo2570	2648960	2649574	615	-	2648960	2649574	615	ORF	lmo2570	hypothetical protein - RAST_Product: FIG00774889: hypothetical protein	FIG00774889: hypothetical protein	Operon_461	Function unknown	ATG	 
lmo2571	2649598	2650230	633	-	2649598	2650230	633	ORF	similar to nicotinamidase	hypothetical protein - RAST_Product: Nicotinamidase (EC 3.5.1.19)	Nicotinamidase (EC 3.5.1.19)	Operon_461	Secondary metabolites biosynthesis, transport and catabolism	ATG	 
lmo2572	2650231	2650755	525	-	2650231	2650755	525	ORF	similar to Chain A, Dihydrofolate Reductase	hypothetical protein	Dihydrofolate reductase (EC 1.5.1.3)	Operon_461	Coenzyme transport and metabolism	ATG	 
lmo2573	2650758	2651756	999	-	2650758	2651756	999	ORF	similar to zinc-binding dehydrogenase	"hypothetical protein - RAST_Product: Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase"	"Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase"	Operon_461	"Energy production and conversion; General function prediction only;"	ATG	 
lmo2574	2651853	2652125	273	-	2651853	2652125	273	ORF	lmo2574	hypothetical protein - RAST_Product: FIG00774193: hypothetical protein	FIG00774193: hypothetical protein	Operon_462	Not in COGs	ATG	 
lmo2575	2652174	2653085	912	-	2652174	2653085	912	ORF	similar to cation transport protein (efflux)	hypothetical protein - RAST_Product: Cobalt-zinc-cadmium resistance protein CzcD	Cobalt-zinc-cadmium resistance protein CzcD	Operon_462	Inorganic ion transport and metabolism	ATG	 
lmo2576	2653211	2657803	4593	-	2653211	2657803	4593	ORF		pepdidoglycan bound protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo2576 homolog		Cell wall/membrane biogenesis	ATG	 
lmo2577	2658024	2658851	828	-	2658024	2658851	828	ORF		hypothetical protein - RAST_Product: Cof-like hydrolase, HAD-superfamily, subfamily IIB	Cof-like hydrolase, HAD-superfamily, subfamily IIB		General function prediction only	TTG	 
lmo2578	2658966	2659841	876	+	2658966	2659841	876	ORF	lmo2578	hypothetical protein - RAST_Product: cell surface hydrolase (putative)	cell surface hydrolase (putative)	Operon_463	General function prediction only	GTG	 
lmo2579	2659852	2660145	294	+	2659852	2660145	294	ORF		hypothetical protein - RAST_Product: FIG00774991: hypothetical protein	FIG00774991: hypothetical protein	Operon_463	Function unknown	ATG	 
lmo2580	2660408	2661076	669	-	2660408	2661076	669	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Heme efflux system ATPase HrtA	Heme efflux system ATPase HrtA		Defense/virulence mechanisms	ATG	 
lmo2581	2661076	2662164	1089	-	2661076	2662164	1089	ORF		hypothetical protein - RAST_Product: Heme efflux system permease HrtB	Heme efflux system permease HrtB		Defense/virulence mechanisms	ATG	 
lmo2582	2662243	2663622	1380	-	2662243	2663622	1380	ORF	similar to two-component sensor histidine kinase	hypothetical protein - RAST_Product: Sensor histidine kinase colocalized with HrtAB transporter	Sensor histidine kinase colocalized with HrtAB transporter	Operon_464	Signal transduction mechanisms	ATG	 
lmo2583	2663619	2664296	678	-	2663619	2664296	678	ORF	similar to two-component response regulator	hypothetical protein - RAST_Product: Two-component response regulator colocalized with HrtAB transporter	Two-component response regulator colocalized with HrtAB transporter	Operon_464	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo2584	2664343	2665128	786	-	2664343	2665128	786	ORF	"similar to formate dehydrogenase associated protein; involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth"	formate dehydrogenase accessory protein	Formate dehydrogenase chain D (EC 1.2.1.2)		Energy production and conversion	ATG	 
lmo2585	2665190	2665666	477	-	2665190	2665666	477	ORF	similar to B. subtilis YrhD protein	hypothetical protein - RAST_Product: Hypothetical protein YrhD	Hypothetical protein YrhD	Operon_465	Function unknown	ATG	 
lmo2586	2665666	2668653	2988	-	2665666	2668653	2988	ORF	similar to formate dehydrogenase alpha chain	hypothetical protein - RAST_Product: Formate dehydrogenase related protein	Formate dehydrogenase related protein	Operon_465	General function prediction only	ATG	 
lmo2587	2669152	2669994	843	+	2669152	2669994	843	ORF		hypothetical protein - RAST_Product: FIG00774290: hypothetical protein	FIG00774290: hypothetical protein		Function unknown	ATG	 
lmo2588	2670042	2671523	1482	-	2670042	2671523	1482	ORF	similar to drug-export proteins	hypothetical protein - RAST_Product: lincomycin resistance protein LmrB	lincomycin resistance protein LmrB		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	TTG	 
lmo2589	2671624	2672511	888	-	2671624	2672511	888	ORF	similar to transcription regulator TetR/AcrR family	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family		Transcription	TTG	 
lmo2590	2678302	2679330	1029	-	2678302	2679330	1029	ORF	similar to ATP binding proteins	hypothetical protein - RAST_Product: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like	Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like		Cell cycle control, mitosis and meiosis	ATG	 
lmo2591	2679599	2681125	1527	+	2679599	2681125	1527	ORF		GW repeat-containing surface protein	N-acetylmuramoyl-L-alanine amidase, family 4		"Cell motility; Intracellular trafficking and secretion;"	TTG	 
lmo2592	2681167	2682018	852	-	2681167	2682018	852	ORF	similar to oxidoreductase, aldo/keto reductase family	hypothetical protein - RAST_Product: oxidoreductase, aldo/keto reductase family	oxidoreductase, aldo/keto reductase family	Operon_466	General function prediction only	ATG	 
lmo2593	2682040	2682462	423	-	2682040	2682462	423	ORF	similar to transcription regulators (MerR family)	hypothetical protein - RAST_Product: transcriptional regulator, MerR family	transcriptional regulator, MerR family	Operon_466	Transcription	ATG	 
lmo2594	2682584	2682943	360	-	2682584	2682943	360	ORF	lmo2594	hypothetical protein - RAST_Product: FIG00774023: hypothetical protein	FIG00774023: hypothetical protein		Not in COGs	ATG	 
lmo2595	2683187	2684056	870	+	2683187	2684056	870	ORF		hypothetical protein - RAST_Product: lipoprotein	lipoprotein		Not in COGs	ATG	 
lmo2596	2684251	2684643	393	-	2684251	2684643	393	ORF	forms a direct contact with the tRNA during translation	30S ribosomal protein S9	SSU ribosomal protein S9p (S16e)	Operon_467	Translation	GTG	 
lmo2597	2684665	2685102	438	-	2684665	2685102	438	ORF	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit	50S ribosomal protein L13	LSU ribosomal protein L13p (L13Ae)	Operon_467	Translation	ATG	 
lmo2598	2685297	2686043	747	-	2685297	2686043	747	ORF	"highly similar to pseudouridylate synthase I; mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability"	tRNA pseudouridine synthase A	tRNA pseudouridine synthase A (EC 4.2.1.70)	Operon_468	Translation	ATG	 
lmo2599	2686049	2686846	798	-	2686049	2686846	798	ORF	highly similar to B. subtilis YbaF protein	hypothetical protein - RAST_Product: Transmembrane component of general energizing module of ECF transporters	Transmembrane component of general energizing module of ECF transporters	Operon_468	Inorganic ion transport and metabolism	ATG	 
lmo2600	2686849	2687715	867	-	2686849	2687715	867	ORF	"similar to ABC transporter (ATP-binding protein); with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene"	cobalt transporter ATP-binding subunit	ATPase component of general energizing module of ECF transporters	Operon_468	Inorganic ion transport and metabolism	ATG	 
lmo2601	2687691	2688530	840	-	2687691	2688530	840	ORF	"similar to ABC transporter (ATP-binding protein); with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene"	cobalt transporter ATP-binding subunit	ATPase component of general energizing module of ECF transporters	Operon_468	Inorganic ion transport and metabolism	GTG	 
lmo2602	2688661	2689323	663	+	2688661	2689323	663	ORF		hypothetical protein - RAST_Product: FIG00774355: hypothetical protein	FIG00774355: hypothetical protein	Operon_469	Function unknown	ATG	 
lmo2603	2689442	2690332	891	+	2689442	2690332	891	ORF	lmo2603	hypothetical protein - RAST_Product: acetamidase/formamidase family protein	acetamidase/formamidase family protein	Operon_469	Energy production and conversion	ATG	 
lmo2604	2690371	2691465	1095	-	2690371	2691465	1095	ORF	lmo2604	hypothetical protein - RAST_Product: FIG00775033: hypothetical protein	FIG00775033: hypothetical protein		Not in COGs	ATG	 
lmo2605	2691673	2692080	408	-	2691673	2692080	408	ORF	is a component of the macrolide binding site in the peptidyl transferase center	50S ribosomal protein L17	LSU ribosomal protein L17p		Translation	ATG	 
lmo2606	2692097	2693041	945	-	2692097	2693041	945	ORF	"highly similar to RNA polymerase (alpha subunit); catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme"	DNA-directed RNA polymerase subunit alpha	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	Operon_470	Transcription	ATG	 
lmo2607	2693151	2693540	390	-	2693151	2693540	390	ORF	"located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3"	30S ribosomal protein S11	SSU ribosomal protein S11p (S14e)	Operon_470	Translation	ATG	 
lmo2608	2693563	2693928	366	-	2693563	2693928	366	ORF	"located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA"	30S ribosomal protein S13	SSU ribosomal protein S13p (S18e)	Operon_470	Translation	ATG	 
lmo2609	2693947	2694060	114	-	2693947	2694060	114	ORF	"smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif"	50S ribosomal protein L36	LSU ribosomal protein L36p	Operon_470	Translation	ATG	 
lmo2610	2694164	2694382	219	-	2694164	2694382	219	ORF	"highly similar to initiation factor IF-I; stimulates the activities of the other two initiation factors, IF-2 and IF-3"	translation initiation factor IF-1	Translation initiation factor 1	Operon_470	Translation	ATG	 
lmo2611	2694769	2695416	648	-	2694769	2695416	648	ORF	"highly similar to adenylate kinases; essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP"	adenylate kinase	Adenylate kinase (EC 2.7.4.3)	Operon_470	Nucleotide transport and metabolism	TTG	 
lmo2612	2695476	2696771	1296	-	2695476	2696771	1296	ORF	"highly similar to preprotein translocase subunit; forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase"	preprotein translocase subunit SecY	Preprotein translocase secY subunit (TC 3.A.5.1.1)	Operon_470	Intracellular trafficking and secretion	ATG	 
lmo2613	2696771	2697211	441	-	2696771	2697211	441	ORF	late assembly protein	50S ribosomal protein L15	LSU ribosomal protein L15p (L27Ae)	Operon_470	Translation	ATG	 
lmo2614	2697267	2697446	180	-	2697267	2697446	180	ORF	"L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7"	50S ribosomal protein L30	LSU ribosomal protein L30p (L7e)	Operon_470	Translation	ATG	 
lmo2615	2697463	2697966	504	-	2697463	2697966	504	ORF	"located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance"	30S ribosomal protein S5	SSU ribosomal protein S5p (S2e)	Operon_470	Translation	ATG	 
lmo2616	2697988	2698347	360	-	2697988	2698347	360	ORF	binds 5S rRNA along with protein L5 and L25	50S ribosomal protein L18	LSU ribosomal protein L18p (L5e)	Operon_470	Translation	GTG	 
lmo2617	2698387	2698923	537	-	2698387	2698923	537	ORF	"ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance"	50S ribosomal protein L6	LSU ribosomal protein L6p (L9e)	Operon_470	Translation	ATG	 
lmo2618	2698954	2699352	399	-	2698954	2699352	399	ORF	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit	30S ribosomal protein S8	SSU ribosomal protein S8p (S15Ae)	Operon_470	Translation	ATG	 
lmo2619	2699383	2699568	186	-	2699383	2699568	186	ORF	"located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif"	30S ribosomal protein S14	SSU ribosomal protein S14p (S29e)	Operon_470	Translation	GTG	 
lmo2620	2699600	2700139	540	-	2699600	2700139	540	ORF	"part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13"	50S ribosomal protein L5	LSU ribosomal protein L5p (L11e)	Operon_470	Translation	ATG	 
lmo2621	2700166	2700477	312	-	2700166	2700477	312	ORF	"assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel"	50S ribosomal protein L24	LSU ribosomal protein L24p (L26e)	Operon_470	Translation	ATG	 
lmo2622	2700515	2700883	369	-	2700515	2700883	369	ORF	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase	50S ribosomal protein L14	LSU ribosomal protein L14p (L23e)	Operon_470	Translation	ATG	 
lmo2623	2700963	2701226	264	-	2700963	2701226	264	ORF	"primary binding protein; helps mediate assembly; involved in translation fidelity"	30S ribosomal protein S17	SSU ribosomal protein S17p (S11e)	Operon_470	Translation	ATG	 
lmo2624	2701254	2701445	192	-	2701254	2701445	192	ORF	one of the stabilizing components for the large ribosomal subunit	50S ribosomal protein L29	LSU ribosomal protein L29p (L35e)	Operon_470	Translation	ATG	 
lmo2625	2701435	2701869	435	-	2701435	2701869	435	ORF	"located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e"	50S ribosomal protein L16	LSU ribosomal protein L16p (L10e)	Operon_470	Translation	ATG	 
lmo2626	2701872	2702528	657	-	2701872	2702528	657	ORF	"forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation"	30S ribosomal protein S3	SSU ribosomal protein S3p (S3e)	Operon_470	Translation	GTG	 
lmo2627	2702532	2702888	357	-	2702532	2702888	357	ORF	"binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center"	50S ribosomal protein L22	LSU ribosomal protein L22p (L17e)	Operon_470	Translation	ATG	 
lmo2628	2702909	2703187	279	-	2702909	2703187	279	ORF	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA	30S ribosomal protein S19	SSU ribosomal protein S19p (S15e)	Operon_470	Translation	ATG	 
lmo2629	2703275	2704108	834	-	2703275	2704108	834	ORF	"one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation"	50S ribosomal protein L2	LSU ribosomal protein L2p (L8e)	Operon_470	Translation	ATG	 
lmo2630	2704149	2704433	285	-	2704149	2704433	285	ORF	"binds third domain of 23S rRNA and protein L29; part of exit tunnel"	50S ribosomal protein L23	LSU ribosomal protein L23p (L23Ae)	Operon_470	Translation	ATG	 
lmo2631	2704433	2705056	624	-	2704433	2705056	624	ORF	"L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA"	50S ribosomal protein L4	LSU ribosomal protein L4p (L1e)	Operon_470	Translation	ATG	 
lmo2632	2705082	2705711	630	-	2705082	2705711	630	ORF	"binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin"	50S ribosomal protein L3	LSU ribosomal protein L3p (L3e)	Operon_470	Translation	ATG	 
lmo2633	2705746	2706054	309	-	2705746	2706054	309	ORF	"NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex"	30S ribosomal protein S10	SSU ribosomal protein S10p (S20e)	Operon_470	Translation	ATG	 
lmo2634	2706415	2707215	801	-	2706415	2707215	801	ORF	similar to B. subtilis YbaF protein	hypothetical protein - RAST_Product: Transmembrane component of general energizing module of ECF transporters	Transmembrane component of general energizing module of ECF transporters	Operon_471	Inorganic ion transport and metabolism	ATG	 
lmo2635	2707235	2708194	960	-	2707235	2708194	960	ORF	"weakly similar to E. coli MenA protein; catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate"	1,4-dihydroxy-2-naphthoate octaprenyltransferase	Putative prenyltransferase, contains 1,4-dihydroxy-2-naphthoate octaprenyltransferase domain	Operon_471	Coenzyme transport and metabolism	ATG	 
lmo2636	2708276	2709358	1083	-	2708276	2709358	1083	ORF	conserved hypothetical lipoprotein	hypothetical protein - RAST_Product: Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	Operon_471	Coenzyme transport and metabolism	ATG	 
lmo2637	2709522	2710421	900	-	2709522	2710421	900	ORF	conserved lipoprotein	hypothetical protein - RAST_Product: Putative pheromone precursor lipoprotein, related to Cad	Putative pheromone precursor lipoprotein, related to Cad		Function unknown	ATG	 
lmo2638	2710869	2712755	1887	+	2710869	2712755	1887	ORF	similar to NADH dehydrogenase	hypothetical protein - RAST_Product: pyridine nucleotide-disulfide oxidoreductase family protein	pyridine nucleotide-disulfide oxidoreductase family protein		Energy production and conversion	ATG	 
lmo2639	2712931	2713365	435	+	2712931	2713365	435	ORF	lmo2639	hypothetical protein - RAST_Product: FIG00774441: hypothetical protein	FIG00774441: hypothetical protein	Operon_472	Function unknown	GTG	 
lmo2640	2713398	2713940	543	+	2713398	2713940	543	ORF	lmo2640	hypothetical protein - RAST_Product: Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	Operon_472	Function unknown	ATG	 
lmo2641	2713962	2714942	981	+	2713962	2714942	981	ORF	similar to heptaprenyl diphosphate synthase component II	hypothetical protein - RAST_Product: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)	Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)	Operon_472	Coenzyme transport and metabolism	ATG	 
lmo2642	2715032	2716363	1332	+	2715032	2716363	1332	ORF	lmo2642	hypothetical protein	serine/threonine protein phosphatase family protein	Operon_472	General function prediction only	GTG	 
lmo2643	2716408	2717394	987	-	2716408	2717394	987	ORF	lmo2643	hypothetical protein - RAST_Product: FIG00774025: hypothetical protein	FIG00774025: hypothetical protein	Operon_473	Not in COGs	ATG	 
lmo2644	2717422	2718234	813	-	2717422	2718234	813	ORF	lmo2644	hypothetical protein - RAST_Product: FIG00774078: hypothetical protein	FIG00774078: hypothetical protein	Operon_473	Not in COGs	ATG	 
lmo2646	2719056	2719775	720	-	2719056	2719775	720	ORF	lmo2646	hypothetical protein	Protein of unknown function DUF1341	Operon_474	Not in COGs	TTG	 
lmo2647	2719735	2720484	750	-	2719735	2720484	750	ORF	similar to creatinine amidohydrolase	hypothetical protein - RAST_Product: Creatinine amidohydrolase (EC 3.5.2.10)	Creatinine amidohydrolase (EC 3.5.2.10)	Operon_474	General function prediction only	GTG	 
lmo2648	2720497	2721489	993	-	2720497	2721489	993	ORF	similar to Phosphotriesterase	hypothetical protein - RAST_Product: phosphotriesterase family protein	phosphotriesterase family protein	Operon_474	General function prediction only	ATG	 
lmo2649	2721559	2722857	1299	-	2721559	2722857	1299	ORF	"similar to hypothetical PTS enzyme IIC component; membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr"	PTS system ascorbate-specific transporter subunit IIC	Transport protein SgaT, putative	Operon_474	Function unknown	ATG	 
lmo2650	2722884	2723156	273	-	2722884	2723156	273	ORF	similar to hypothetical PTS enzyme IIB component	hypothetical protein - RAST_Product: PTS system, lactose/cellobiose specific IIB subunit	PTS system, lactose/cellobiose specific IIB subunit	Operon_474	Carbohydrate transport and metabolism	ATG	 
lmo2651	2723159	2723593	435	-	2723159	2723593	435	ORF	similar to mannitol-specific PTS enzyme IIA component	hypothetical protein - RAST_Product: PTS system, IIA component	PTS system, IIA component	Operon_474	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2652	2723786	2725852	2067	-	2723786	2725852	2067	ORF	similar to transcriptional antiterminator	hypothetical protein - RAST_Product: PTS system, IIA component	PTS system, IIA component		"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2653	2726008	2727195	1188	-	2726008	2727195	1188	ORF	"highly similar to translation elongation factor EF-Tu; EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu"	elongation factor Tu	Translation elongation factor Tu	Operon_475	Translation	ATG	 
lmo2654	2727304	2729391	2088	-	2727304	2729391	2088	ORF	"highly similar to translation elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene"	elongation factor G	Translation elongation factor G	Operon_475	Translation	ATG	 
lmo2655	2729457	2729927	471	-	2729457	2729927	471	ORF	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit	30S ribosomal protein S7	SSU ribosomal protein S7p (S5e)	Operon_475	Translation	ATG	 
lmo2656	2729958	2730371	414	-	2729958	2730371	414	ORF	"interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance"	30S ribosomal protein S12	SSU ribosomal protein S12p (S23e)	Operon_475	Translation	ATG	 
lmo2657	2730564	2731961	1398	-	2730564	2731961	1398	ORF	"similar to dGTP triphosphohydrolase; dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate"	deoxyguanosinetriphosphate triphosphohydrolase-like protein	deoxyguanosinetriphosphate triphosphohydrolase	Operon_476	Nucleotide transport and metabolism	ATG	 
lmo2658	2731976	2732455	480	-	2731976	2732455	480	ORF	similar to spermidine/spermine N1-acetyl transferase	hypothetical protein - RAST_Product: Histone acetyltransferase HPA2 and related acetyltransferases	Histone acetyltransferase HPA2 and related acetyltransferases	Operon_476	"Transcription; General function prediction only;"	ATG	 
lmo2659	2732589	2733233	645	-	2732589	2733233	645	ORF	similar to ribulose-phosphate 3-epimerase	hypothetical protein - RAST_Product: Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	Operon_477	Carbohydrate transport and metabolism	ATG	 
lmo2660	2733230	2735245	2016	-	2733230	2735245	2016	ORF	similar to transketolase	hypothetical protein - RAST_Product: Transketolase (EC 2.2.1.1)	Transketolase (EC 2.2.1.1)	Operon_477	Carbohydrate transport and metabolism	TTG	 
lmo2661	2735279	2735953	675	-	2735279	2735953	675	ORF	similar to ribulose-5-phosphate 3-epimerase	hypothetical protein - RAST_Product: Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	Operon_477	Carbohydrate transport and metabolism	ATG	 
lmo2662	2735962	2736402	441	-	2735962	2736402	441	ORF	similar to ribose 5-phosphate epimerase	hypothetical protein - RAST_Product: Ribose 5-phosphate isomerase B (EC 5.3.1.6)	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	Operon_477	Carbohydrate transport and metabolism	ATG	 
lmo2663	2736597	2737628	1032	-	2736597	2737628	1032	ORF	similar to polyol dehydrogenase	hypothetical protein - RAST_Product: Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	Operon_477	"Amino acid transport and metabolism; General function prediction only;"	TTG	 
lmo2664	2737630	2738682	1053	-	2737630	2738682	1053	ORF	similar to sorbitol dehydrogenase	hypothetical protein - RAST_Product: Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	Operon_477	"Amino acid transport and metabolism; General function prediction only;"	ATG	 
lmo2665	2738719	2739990	1272	-	2738719	2739990	1272	ORF	similar to PTS system galactitol-specific enzyme IIC component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIC component (EC 2.7.1.69)	PTS system, galactitol-specific IIC component (EC 2.7.1.69)	Operon_477	Carbohydrate transport and metabolism	ATG	 
lmo2666	2740052	2740333	282	-	2740052	2740333	282	ORF	similar to PTS system galactitol-specific enzyme IIB component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIB component (EC 2.7.1.69)	PTS system, galactitol-specific IIB component (EC 2.7.1.69)	Operon_477	Carbohydrate transport and metabolism	ATG	 
lmo2667	2740390	2740854	465	-	2740390	2740854	465	ORF	similar to PTS system galactitol-specific enzyme IIA component	hypothetical protein - RAST_Product: PTS system, galactitol-specific IIA component (EC 2.7.1.69)	PTS system, galactitol-specific IIA component (EC 2.7.1.69)	Operon_477	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2668	2740888	2742957	2070	-	2740888	2742957	2070	ORF	similar to transcriptional antiterminator (BglG family)	hypothetical protein - RAST_Product: Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component (EC 2.7.1.69)	Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component (EC 2.7.1.69)	Operon_477	"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2669	2743326	2744138	813	-	2743326	2744138	813	ORF	lmo2669	hypothetical protein - RAST_Product: membrane protein	membrane protein		Function unknown	ATG	 
lmo2670	2744212	2744574	363	-	2744212	2744574	363	ORF		hypothetical protein - RAST_Product: FIG00774199: hypothetical protein	FIG00774199: hypothetical protein	Operon_478	Function unknown	ATG	 
lmo2671	2744571	2744939	369	-	2744571	2744939	369	ORF	lmo2671	hypothetical protein - RAST_Product: FIG00774356: hypothetical protein	FIG00774356: hypothetical protein	Operon_478	Amino acid transport and metabolism	ATG	 
lmo2672	2744985	2745791	807	-	2744985	2745791	807	ORF	weakly similar to transcription regulator	hypothetical protein - RAST_Product: Transcriptional regulator, AraC family	Transcriptional regulator, AraC family	Operon_478	Transcription	ATG	 
lmo2673	2745907	2746377	471	+	2745907	2746377	471	ORF		hypothetical protein - RAST_Product: Universal stress protein family	Universal stress protein family	Operon_479	Signal transduction mechanisms	ATG	 
lmo2674	2746423	2746878	456	+	2746423	2746878	456	ORF	"similar to ribose 5-phosphate epimerase; catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity"	ribose-5-phosphate isomerase B	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	Operon_479	Carbohydrate transport and metabolism	ATG	 
lmo2675	2747073	2747414	342	+	2747073	2747414	342	ORF	lmo2675	hypothetical protein - RAST_Product: FIG00774830: hypothetical protein	FIG00774830: hypothetical protein	Operon_480	Not in COGs	ATG	 
lmo2676	2747427	2748683	1257	+	2747427	2748683	1257	ORF	similar to UV-damage repair protein	hypothetical protein	ImpB/MucB/SamB family protein	Operon_480	Replication, recombination and repair	GTG	 
lmo2677	2748685	2749497	813	-	2748685	2749497	813	ORF	similar to hydrolase (esterase)	hypothetical protein - RAST_Product: hydrolase, alpha/beta fold family	hydrolase, alpha/beta fold family	Operon_481	General function prediction only	ATG	 
lmo2678	2749538	2750233	696	-	2749538	2750233	696	ORF	similar to two components response regulator	hypothetical protein - RAST_Product: DNA-binding response regulator KdpE	DNA-binding response regulator KdpE	Operon_481	"Transcription; Signal transduction mechanisms;"	ATG	 
lmo2679	2750230	2752920	2691	-	2750230	2752920	2691	ORF	similar to the two components sensor protein kdpD	hypothetical protein - RAST_Product: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	Operon_481	Signal transduction mechanisms	ATG	 
lmo2680	2752936	2753508	573	-	2752936	2753508	573	ORF		potassium-transporting atpase c chain	Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)	Operon_481	Inorganic ion transport and metabolism	ATG	 
lmo2681	2753523	2755568	2046	-	2753523	2755568	2046	ORF	One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions	potassium-transporting ATPase subunit B	Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)	Operon_481	Inorganic ion transport and metabolism	ATG	 
lmo2682	2755580	2757265	1686	-	2755580	2757265	1686	ORF	"highly similar to potassium-transporting atpase a chain; catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions"	potassium-transporting ATPase subunit A	Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)	Operon_481	Inorganic ion transport and metabolism	ATG	 
lmo2683	2757606	2757911	306	+	2757606	2757911	306	ORF	similar to cellobiose phosphotransferase enzyme IIB component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Operon_482	Carbohydrate transport and metabolism	ATG	 
lmo2684	2758046	2759353	1308	+	2758046	2759353	1308	ORF	similar to cellobiose phosphotransferase enzyme IIC component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Operon_482	Carbohydrate transport and metabolism	ATG	 
lmo2685	2759390	2759692	303	+	2759390	2759692	303	ORF	similar to cellobiose phosphotransferase enzyme IIA component	"hypothetical protein - RAST_Product: PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69); PTS system, cellobiose-specific IIA component (EC 2.7.1.69)"	"PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69); PTS system, cellobiose-specific IIA component (EC 2.7.1.69)"	Operon_482	Carbohydrate transport and metabolism	ATG	 
lmo2686	2760147	2760680	534	-	2760147	2760680	534	ORF	lmo2686	hypothetical protein - RAST_Product: FIG00775116: hypothetical protein	FIG00775116: hypothetical protein	Operon_483	Not in COGs	ATG	 
lmo2687	2760845	2761954	1110	-	2760845	2761954	1110	ORF	similar to cell division protein FtsW	hypothetical protein - RAST_Product: Cell division protein FtsW	Cell division protein FtsW	Operon_483	Cell cycle control, mitosis and meiosis	ATG	 
lmo2688	2761951	2763081	1131	-	2761951	2763081	1131	ORF	similar to cell division protein FtsW	hypothetical protein - RAST_Product: Cell division protein FtsW	Cell division protein FtsW	Operon_483	Cell cycle control, mitosis and meiosis	ATG	 
lmo2689	2763082	2765652	2571	-	2763082	2765652	2571	ORF	highly similar to Mg2+ transport ATPase	hypothetical protein - RAST_Product: Mg(2+) transport ATPase, P-type (EC 3.6.3.2)	Mg(2+) transport ATPase, P-type (EC 3.6.3.2)	Operon_483	Inorganic ion transport and metabolism	ATG	 
lmo2690	2766207	2766773	567	-	2766207	2766773	567	ORF	similar to transcription regulator, TetR family	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family		Transcription	ATG	 
lmo2691	2766935	2768707	1773	+	2766935	2768707	1773	ORF	"similar to autolysin, N-acetylmuramidase; cell wall hydrolase; muramidase-2 like protein in Enterococcus faecalis; in Enterococcus faecalis a mutant in this gene has no effect on virulence in mouse models; Listeria monocytogenes MurA in involved in general autolysis; contains an N-terminal muramidase domain and C-terminal LysM repeats for cell wall-anchoring"	autolysin	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)		"Cell wall/membrane biogenesis; Cell motility; Intracellular trafficking and secretion;"	ATG	 
lmo2692	2768944	2769273	330	-	2768944	2769273	330	ORF	lmo2692	hypothetical protein - RAST_Product: protein from nitrogen regulatory protein P-II (GLNB) family, ortholog YAAQ B. subtilis	protein from nitrogen regulatory protein P-II (GLNB) family, ortholog YAAQ B. subtilis	Operon_484	Function unknown	TTG	 
lmo2693	2769381	2770007	627	-	2769381	2770007	627	ORF	"similar to thymidylate kinase; catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)"	thymidylate kinase	Thymidylate kinase (EC 2.7.4.9)	Operon_484	Nucleotide transport and metabolism	ATG	 
lmo2694	2770060	2771439	1380	-	2770060	2771439	1380	ORF	similar to lysine decarboxylase	hypothetical protein - RAST_Product: Arginine decarboxylase (EC 4.1.1.19) / Lysine decarboxylase (EC 4.1.1.18)	Arginine decarboxylase (EC 4.1.1.19) / Lysine decarboxylase (EC 4.1.1.18)	Operon_484	Amino acid transport and metabolism	ATG	 
lmo2695	2771623	2772612	990	+	2771623	2772612	990	ORF	"similar to dihydroxyacetone kinase; with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase"	dihydroxyacetone kinase subunit DhaK	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK	Operon_485	Carbohydrate transport and metabolism	ATG	 
lmo2696	2772634	2773230	597	+	2772634	2773230	597	ORF	similar to hypothetical dihydroxyacetone kinase	hypothetical protein - RAST_Product: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL	Operon_485	Carbohydrate transport and metabolism	ATG	 
lmo2697	2773234	2773608	375	+	2773234	2773608	375	ORF	lmo2697	phosphotransferase mannnose-specific family component IIA	"Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component"	Operon_485	Function unknown	ATG	 
lmo2698	2773714	2774565	852	+	2773714	2774565	852	ORF	similar to putative transcription regulator	hypothetical protein - RAST_Product: Sialic acid utilization regulator, RpiR family	Sialic acid utilization regulator, RpiR family	Operon_486	Transcription	ATG	 
lmo2699	2774684	2775523	840	+	2774684	2775523	840	ORF	similar to conserved hypothetical protein	hypothetical protein - RAST_Product: Cof-like hydrolase	Cof-like hydrolase	Operon_486	General function prediction only	ATG	 
lmo2700	2775644	2776486	843	+	2775644	2776486	843	ORF	similar to aldo/keto reductase	hypothetical protein - RAST_Product: oxidoreductase of aldo/keto reductase family, subgroup 1	oxidoreductase of aldo/keto reductase family, subgroup 1		General function prediction only	ATG	 
lmo2701	2776532	2776777	246	-	2776532	2776777	246	ORF	similar to B. subtilis YaaL protein	hypothetical protein - RAST_Product: FIG015094: hypothetical protein	FIG015094: hypothetical protein	Operon_487	Not in COGs	ATG	 
lmo2702	2776792	2777388	597	-	2776792	2777388	597	ORF	"highly similar to recombination protein recR; involved in a recombinational process of DNA repair, independent of the recBC complex"	recombination protein RecR	Recombination protein RecR	Operon_487	Replication, recombination and repair	ATG	 
lmo2703	2777497	2777814	318	-	2777497	2777814	318	ORF	highly similar to B. subtilis YaaK protein	hypothetical protein - RAST_Product: FIG000557: hypothetical protein co-occurring with RecR	FIG000557: hypothetical protein co-occurring with RecR	Operon_487	Function unknown	ATG	 
lmo2704	2777844	2779583	1740	-	2777844	2779583	1740	ORF	highly similar to DNA polymerase III (gamma and tau subunits)	hypothetical protein - RAST_Product: DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	Operon_487	Replication, recombination and repair	ATG	 
lmo2705	2779910	2780374	465	-	2779910	2780374	465	ORF	lmo2705	hypothetical protein - RAST_Product: FIG00774196: hypothetical protein	FIG00774196: hypothetical protein	Operon_488	Not in COGs	GTG	 
lmo2706	2780392	2780574	183	-	2780392	2780574	183	ORF	lmo2706	hypothetical protein - RAST_Product: FIG00774825: hypothetical protein	FIG00774825: hypothetical protein	Operon_488	Not in COGs	ATG	 
lmo2707	2780577	2780798	222	-	2780577	2780798	222	ORF	lmo2707	hypothetical protein - RAST_Product: FIG00774270: hypothetical protein	FIG00774270: hypothetical protein	Operon_488	Not in COGs	ATG	 
lmo2708	2780933	2782297	1365	-	2780933	2782297	1365	ORF	similar to PTS system, cellobiose-specific enzyme IIC	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2709	2782739	2782894	156	+	2782739	2782894	156	ORF	lmo2709	hypothetical protein - RAST_Product: FIG00774121: hypothetical protein	FIG00774121: hypothetical protein		Not in COGs	ATG	 
lmo2710	2783466	2784107	642	-	2783466	2784107	642	ORF	lmo2710	hypothetical protein - RAST_Product: FIG00774282: hypothetical protein	FIG00774282: hypothetical protein		Coenzyme transport and metabolism	ATG	 
lmo2711	2784354	2784674	321	+	2784354	2784674	321	ORF		hypothetical protein			Not in COGs	ATG	 
lmo2712	2784805	2786319	1515	-	2784805	2786319	1515	ORF	highly similar to gluconate kinase	hypothetical protein	Gluconokinase (EC 2.7.1.12)		Carbohydrate transport and metabolism	TTG	 
lmo2713	2786435	2787373	939	-	2786435	2787373	939	ORF		GW repeat-containing protein	secreted protein with 1 GW repeat	Operon_489	Function unknown	ATG	 
lmo2714	2787416	2788363	948	-	2787416	2788363	948	ORF		pepdidoglycan bound protein	Putative peptidoglycan bound protein (LPXTG motif) Lmo2714 homolog	Operon_489	Not in COGs	ATG	 
lmo2715	2788504	2790243	1740	-	2788504	2790243	1740	ORF	highly similar to ABC transporter (ATP-binding protein) required for expression of cytochrome BD	hypothetical protein - RAST_Product: Transport ATP-binding protein CydD	Transport ATP-binding protein CydD	Operon_490	"Energy production and conversion; Posttranslational modification, protein turnover, chaperones;"	ATG	 
lmo2716	2790243	2791967	1725	-	2790243	2791967	1725	ORF	highly similar to ABC transporter required for expression of cytochrome BD	hypothetical protein - RAST_Product: Transport ATP-binding protein CydC	Transport ATP-binding protein CydC	Operon_490	"Energy production and conversion; Posttranslational modification, protein turnover, chaperones;"	ATG	 
lmo2717	2791967	2792980	1014	-	2791967	2792980	1014	ORF	highly similar to cytochrome D ubiquinol oxidase subunit II	hypothetical protein - RAST_Product: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	Operon_490	Energy production and conversion	TTG	 
lmo2718	2792967	2794373	1407	-	2792967	2794373	1407	ORF	highly similar to cytochrome D ubiquinol oxidase subunit I	hypothetical protein - RAST_Product: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	Operon_490	Energy production and conversion	GTG	 
lmo2719	2794755	2795225	471	-	2794755	2795225	471	ORF		hypothetical protein - RAST_Product: tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)		"Nucleotide transport and metabolism; Translation;"	ATG	 
lmo2720	2795420	2796997	1578	+	2795420	2796997	1578	ORF	similar to acetate-CoA ligase	hypothetical protein - RAST_Product: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI homolog	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI homolog		Lipid transport and metabolism	ATG	 
lmo2721	2797039	2797758	720	-	2797039	2797758	720	ORF	similar to glucosamine-6-phosphate isomerase	putative 6-phosphogluconolactonase	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)		Carbohydrate transport and metabolism	ATG	 
lmo2722	2797838	2798572	735	+	2797838	2798572	735	ORF	similar to merR-family transcriptional regulator	hypothetical protein - RAST_Product: multidrug efflux transporter transcriptional regulatory protein	multidrug efflux transporter transcriptional regulatory protein		Transcription	GTG	 
lmo2723	2798626	2799087	462	+	2798626	2799087	462	ORF		hypothetical protein - RAST_Product: acetyltransferase, GNAT family	acetyltransferase, GNAT family		"Transcription; General function prediction only;"	GTG	 
lmo2724	2799108	2799551	444	-	2799108	2799551	444	ORF		"hypothetical protein - RAST_Product: PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"	"PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"	Operon_491	Function unknown	ATG	 
lmo2725	2799609	2800961	1353	-	2799609	2800961	1353	ORF		hypothetical protein - RAST_Product: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	Operon_491	Defense/virulence mechanisms	ATG	 
lmo2726	2800958	2801407	450	-	2800958	2801407	450	ORF	similar to transcription regulators	hypothetical protein - RAST_Product: Transcriptional regulator, MarR family	Transcriptional regulator, MarR family	Operon_491	Transcription	ATG	 
lmo2727	2801577	2802458	882	+	2801577	2802458	882	ORF		hypothetical protein	leucine-rich protein	Operon_492	"Signal transduction mechanisms; Secondary metabolites biosynthesis, transport and catabolism;"	GTG	 
lmo2728	2802543	2802998	456	+	2802543	2802998	456	ORF	similar to transcription regulator MerR family	hypothetical protein - RAST_Product: transcriptional regulator, MerR family	transcriptional regulator, MerR family	Operon_492	Transcription	ATG	 
lmo2729	2802998	2803402	405	+	2802998	2803402	405	ORF		hypothetical protein - RAST_Product: Transcriptional regulator	Transcriptional regulator	Operon_492	Function unknown	ATG	 
lmo2730	2803445	2804056	612	-	2803445	2804056	612	ORF	similar to phosphatase	hypothetical protein - RAST_Product: Haloacid dehalogenase-like hydrolase	Haloacid dehalogenase-like hydrolase	Operon_493	General function prediction only	ATG	 
lmo2731	2804070	2804438	369	-	2804070	2804438	369	ORF	similar to transcription regulator (RpiR family)	hypothetical protein - RAST_Product: Transcription regulator, RpiR family	Transcription regulator, RpiR family	Operon_493	Not in COGs	ATG	 
lmo2732	2804522	2805274	753	-	2804522	2805274	753	ORF	lmo2732	hypothetical protein - RAST_Product: phosphosugar-binding protein	phosphosugar-binding protein	Operon_493	Transcription	ATG	 
lmo2733	2805440	2807398	1959	+	2805440	2807398	1959	ORF	similar to PTS system, fructose-specific IIABC component	hypothetical protein - RAST_Product: PTS system, fructose-specific IIABC component (EC 2.7.1.69)	PTS system, fructose-specific IIABC component (EC 2.7.1.69)	Operon_494	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	TTG	 
lmo2734	2807459	2810107	2649	+	2807459	2810107	2649	ORF	weakly similar to sugar hydrolase	hypothetical protein - RAST_Product: Alpha-mannosidase (EC 3.2.1.24)	Alpha-mannosidase (EC 3.2.1.24)	Operon_494	Carbohydrate transport and metabolism	ATG	 
lmo2735	2810109	2811791	1683	+	2810109	2811791	1683	ORF	similar to Sucrose phosphorylase	hypothetical protein - RAST_Product: Putative sucrose phosphorylase (EC 2.4.1.7)	Putative sucrose phosphorylase (EC 2.4.1.7)	Operon_494	Carbohydrate transport and metabolism	ATG	 
lmo2736	2811788	2812921	1134	+	2811788	2812921	1134	ORF		hypothetical protein - RAST_Product: Glycerate kinase (EC 2.7.1.31)	Glycerate kinase (EC 2.7.1.31)	Operon_494	Carbohydrate transport and metabolism	ATG	 
lmo2737	2812925	2813881	957	-	2812925	2813881	957	ORF	similar to transcriptional regulator (LacI family)	hypothetical protein - RAST_Product: Bacillus subtilis catabolite repression transcription factor CcpB	Bacillus subtilis catabolite repression transcription factor CcpB	Operon_495	Transcription	ATG	 
lmo2738	2813949	2815283	1335	-	2813949	2815283	1335	ORF	conserved hypothetical protein similar to hypothetical hemolysin	hypothetical protein - RAST_Product: Hemolysins and related proteins containing CBS domains	Hemolysins and related proteins containing CBS domains	Operon_495	General function prediction only	ATG	 
lmo2739	2815401	2816090	690	-	2815401	2816090	690	ORF	"similar to regulatory proteins of the SIR2 family; Modulates the activities of several enzymes which are inactive in their acetylated form"	NAD-dependent deacetylase	NAD-dependent protein deacetylase of SIR2 family		Transcription	ATG	 
lmo2740	2816083	2816373	291	-	2816083	2816373	291	ORF	lmo2740	hypothetical protein - RAST_Product: FIG00774732: hypothetical protein	FIG00774732: hypothetical protein		"Transcription; Replication, recombination and repair;"	ATG	 
lmo2741	2816363	2817571	1209	-	2816363	2817571	1209	ORF	similar to drug-efflux transporters	"hypothetical protein - RAST_Product: Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1); Efflux pump Lde"	"Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1); Efflux pump Lde"	Operon_496	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2742	2817688	2818035	348	-	2817688	2818035	348	ORF	lmo2742	hypothetical protein - RAST_Product: FIG00774929: hypothetical protein	FIG00774929: hypothetical protein	Operon_496	Not in COGs	ATG	 
lmo2743	2818054	2818698	645	-	2818054	2818698	645	ORF	"similar to transaldolase; similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity"	putative translaldolase	Transaldolase (EC 2.2.1.2)	Operon_496	Carbohydrate transport and metabolism	ATG	 
lmo2744	2818841	2819530	690	-	2818841	2819530	690	ORF	weakly similar to transcription regulators CRP/FNR family	hypothetical protein - RAST_Product: cyclic nucleotide-binding protein	cyclic nucleotide-binding protein		Signal transduction mechanisms	ATG	 
lmo2745	2819860	2821587	1728	+	2819860	2821587	1728	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: Lipid A export ATP-binding/permease protein MsbA	Lipid A export ATP-binding/permease protein MsbA		Defense/virulence mechanisms	ATG	 
lmo2746	2821641	2821892	252	-	2821641	2821892	252	ORF	lmo2746	hypothetical protein	FIG00774856: hypothetical protein	Operon_498	Transcription	ATG	 
lmo2747	2821912	2823195	1284	-	2821912	2823195	1284	ORF	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA	seryl-tRNA synthetase	Seryl-tRNA synthetase (EC 6.1.1.11)	Operon_498	Translation	ATG	 
lmo2748	2823530	2823949	420	-	2823530	2823949	420	ORF	similar to B. subtilis stress protein YdaG	hypothetical protein - RAST_Product: general stress protein 26	general stress protein 26		General function prediction only	ATG	 
lmo2749	2824079	2824651	573	+	2824079	2824651	573	ORF	similar to glutamine amidotransferase	hypothetical protein - RAST_Product: Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	Operon_499	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	GTG	 
lmo2750	2824648	2826354	1707	+	2824648	2826354	1707	ORF	similar to para-aminobenzoate synthase component I	hypothetical protein - RAST_Product: Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) / Aminodeoxychorismate lyase (EC 4.1.3.38)	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) / Aminodeoxychorismate lyase (EC 4.1.3.38)	Operon_499	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	ATG	 
lmo2751	2826515	2828236	1722	+	2826515	2828236	1722	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Lipid A export ATP-binding/permease protein MsbA	Lipid A export ATP-binding/permease protein MsbA	Operon_500	Defense/virulence mechanisms	ATG	 
lmo2752	2828236	2830008	1773	+	2828236	2830008	1773	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: Lipid A export ATP-binding/permease protein MsbA	Lipid A export ATP-binding/permease protein MsbA	Operon_500	Defense/virulence mechanisms	ATG	 
lmo2753	2830284	2830523	240	+	2830284	2830523	240	ORF	lmo2753	hypothetical protein - RAST_Product: Lin2896 protein	Lin2896 protein		Not in COGs	ATG	 
lmo2754	2830542	2831879	1338	-	2830542	2831879	1338	ORF	similar to D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)	hypothetical protein - RAST_Product: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	Operon_501	Cell wall/membrane biogenesis	GTG	 
lmo2755	2832058	2833725	1668	-	2832058	2833725	1668	ORF	similar to acylase and diesterase	hypothetical protein - RAST_Product: hydrolase, CocE/NonD family	hydrolase, CocE/NonD family	Operon_501	General function prediction only	GTG	 
lmo2756	2833834	2835987	2154	-	2833834	2835987	2154	ORF	"similar to DNA topoisomerase III; decatenates replicating daughter chromosomes"	DNA topoisomerase III	DNA topoisomerase III (EC 5.99.1.2)	Operon_502	Replication, recombination and repair	ATG	 
lmo2757	2836011	2837783	1773	-	2836011	2837783	1773	ORF	similar to ATP-dependent DNA helicases	hypothetical protein - RAST_Product: ATP-dependent DNA helicase RecQ	ATP-dependent DNA helicase RecQ	Operon_502	Replication, recombination and repair	ATG	 
lmo2758	2837944	2839410	1467	-	2837944	2839410	1467	ORF	similar to inosine-monophosphate dehydrogenase	hypothetical protein - RAST_Product: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)		"Nucleotide transport and metabolism; General function prediction only;"	ATG	 
lmo2759	2839698	2840228	531	-	2839698	2840228	531	ORF		hypothetical protein - RAST_Product: COG2110, Macro domain, possibly ADP-ribose binding module	COG2110, Macro domain, possibly ADP-ribose binding module		General function prediction only	ATG	 
lmo2760	2840286	2841896	1611	-	2840286	2841896	1611	ORF	similar to ABC transporter (ATP-binding protein)	hypothetical protein - RAST_Product: ABC transporter ATP-binding protein uup	ABC transporter ATP-binding protein uup		General function prediction only	ATG	 
lmo2761	2842413	2843867	1455	+	2842413	2843867	1455	ORF	similar to beta-glucosidase	"hypothetical protein - RAST_Product: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)"	"Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)"	Operon_503	Carbohydrate transport and metabolism	ATG	 
lmo2762	2843914	2844216	303	+	2843914	2844216	303	ORF	similar to PTS cellobiose-specific enzyme IIB	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Operon_503	Carbohydrate transport and metabolism	ATG	 
lmo2763	2844249	2845601	1353	+	2844249	2845601	1353	ORF	similar to PTS cellobiose-specific enzyme IIC	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	Operon_503	Carbohydrate transport and metabolism	ATG	 
lmo2764	2845613	2846497	885	+	2845613	2846497	885	ORF	similar to xylose operon regulatory protein and to glucose kinase	hypothetical protein - RAST_Product: N-acetylmannosamine kinase (EC 2.7.1.60)	N-acetylmannosamine kinase (EC 2.7.1.60)	Operon_503	"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo2765	2846490	2846798	309	+	2846490	2846798	309	ORF	similar to PTS cellobiose-specific enzyme IIA	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	Operon_503	Carbohydrate transport and metabolism	ATG	 
lmo2766	2846839	2847573	735	-	2846839	2847573	735	ORF	similar to hypothetical transcriptional regulator	hypothetical protein - RAST_Product: Phosphosugar-binding transcriptional regulator, RpiR family	Phosphosugar-binding transcriptional regulator, RpiR family	Operon_504	Transcription	ATG	 
lmo2767	2847673	2848335	663	-	2847673	2848335	663	ORF	lmo2767	hypothetical protein - RAST_Product: FIG00774139: hypothetical protein	FIG00774139: hypothetical protein	Operon_504	Function unknown	TTG	 
lmo2768	2848406	2849536	1131	-	2848406	2849536	1131	ORF	hypothetical membrane protein	hypothetical protein	membrane protein	Operon_504	Not in COGs	ATG	 
lmo2769	2849563	2850450	888	-	2849563	2850450	888	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein	Operon_504	Defense/virulence mechanisms	ATG	 
lmo2770	2850620	2852950	2331	+	2850620	2852950	2331	ORF	"similar to gamma-glutamylcysteine synthetase (for the N_terminal part) and to cyanophycin synthetase (C-terminal part); Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine"	bifunctional glutamate--cysteine ligase/glutathione synthetase	Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3)		"Cell wall/membrane biogenesis; Coenzyme transport and metabolism;"	ATG	 
lmo2771	2852988	2854436	1449	-	2852988	2854436	1449	ORF	similar to beta-glucosidase	hypothetical protein - RAST_Product: 6-phospho-beta-glucosidase (EC 3.2.1.86)	6-phospho-beta-glucosidase (EC 3.2.1.86)		Carbohydrate transport and metabolism	ATG	 
lmo2772	2854429	2856282	1854	-	2854429	2856282	1854	ORF	similar to beta-glucoside-specific enzyme IIABC	hypothetical protein - RAST_Product: PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)	PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2773	2856379	2857218	840	-	2856379	2857218	840	ORF	similar to transcription antiterminator	hypothetical protein - RAST_Product: Beta-glucoside bgl operon antiterminator, BglG family	Beta-glucoside bgl operon antiterminator, BglG family		Transcription	TTG	 
lmo2774	2857580	2858203	624	-	2857580	2858203	624	ORF	similar to ABC transporter, ATP-binding protein	hypothetical protein - RAST_Product: ABC transporter ATP-binding protein YvcR	ABC transporter ATP-binding protein YvcR		Defense/virulence mechanisms	ATG	 
lmo2775	2858196	2860364	2169	-	2858196	2860364	2169	ORF	hypothetical membrane protein	hypothetical protein - RAST_Product: bacteriocin immunity protein	bacteriocin immunity protein		Function unknown	ATG	 
lmo2776	2860426	2860821	396	-	2860426	2860821	396	ORF	lmo2776	hypothetical protein - RAST_Product: FIG00774543: hypothetical protein	FIG00774543: hypothetical protein		Not in COGs	ATG	 
lmo2777	2861424	2862614	1191	+	2861424	2862614	1191	ORF	similar to efflux protein	hypothetical protein - RAST_Product: drug resistance transporter, Bcr/CflA family	drug resistance transporter, Bcr/CflA family		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2778	2862774	2863283	510	-	2862774	2863283	510	ORF	lmo2778	hypothetical protein - RAST_Product: FIG00774119: hypothetical protein	FIG00774119: hypothetical protein		Not in COGs	TTG	 
lmo2779	2863561	2864661	1101	-	2863561	2864661	1101	ORF	"similar to probable GTP-binding protein; translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1"	GTP-dependent nucleic acid-binding protein EngD	GTP-binding and nucleic acid-binding protein YchF		Translation	ATG	 
lmo2780	2864813	2865121	309	-	2864813	2865121	309	ORF	similar to cellobiose PTS enzyme IIA	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)	PTS system, cellobiose-specific IIA component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2781	2865127	2867397	2271	-	2865127	2867397	2271	ORF	similar to beta-glucosidase	hypothetical protein - RAST_Product: Beta-glucosidase (EC 3.2.1.21)	Beta-glucosidase (EC 3.2.1.21)		Carbohydrate transport and metabolism	ATG	 
lmo2782	2867432	2867731	300	-	2867432	2867731	300	ORF	similar to PTS, cellobiose-specific IIB component	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	PTS system, cellobiose-specific IIB component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2783	2867746	2869041	1296	-	2867746	2869041	1296	ORF	similar to cellobiose phosphotransferase system enzyme IIC	hypothetical protein - RAST_Product: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)		Carbohydrate transport and metabolism	TTG	 
lmo2784	2869191	2871107	1917	-	2869191	2871107	1917	ORF	similar to lichenan operon transcription antiterminator licR	hypothetical protein - RAST_Product: Transcriptional antiterminator of lichenan operon, BglG family	Transcriptional antiterminator of lichenan operon, BglG family		"Transcription; Carbohydrate transport and metabolism; Signal transduction mechanisms;"	GTG	 
lmo2785	2871318	2872784	1467	-	2871318	2872784	1467	ORF		catalase	Catalase (EC 1.11.1.6)		Inorganic ion transport and metabolism	ATG	 
lmo2786	2872932	2873915	984	-	2872932	2873915	984	ORF		hypothetical protein - RAST_Product: ADP-ribosylglycohydrolase YegU (EC 3.2.-.-)	ADP-ribosylglycohydrolase YegU (EC 3.2.-.-)		Posttranslational modification, protein turnover, chaperones	ATG	 
lmo2787	2873915	2875837	1923	-	2873915	2875837	1923	ORF		beta-glucoside-specific phosphotransferase enzyme II ABC component	PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69)		Carbohydrate transport and metabolism	ATG	 
lmo2788	2875945	2876775	831	-	2875945	2876775	831	ORF		transcription antiterminator	Beta-glucoside bgl operon antiterminator, BglG family		Transcription	TTG	 
lmo2789	2876947	2877153	207	-	2876947	2877153	207	ORF	lmo2789	hypothetical protein	FIG00774326: hypothetical protein	Operon_505	Function unknown	ATG	 
lmo2790	2877160	2878011	852	-	2877160	2878011	852	ORF		partition protein ParB homolg	Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J	Operon_505	Transcription	ATG	 
lmo2791	2878004	2878765	762	-	2878004	2878765	762	ORF		partition protein, ParA-like protein	Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj	Operon_505	Cell cycle control, mitosis and meiosis	TTG	 
lmo2792	2878989	2879747	759	-	2878989	2879747	759	ORF	lmo2792	hypothetical protein	DNA-binding protein		Transcription	GTG	 
lmo2793	2879906	2880205	300	-	2879906	2880205	300	ORF	lmo2793	hypothetical protein	FIG00774406: hypothetical protein	Operon_506	Not in COGs	GTG	 
lmo2794	2880217	2881071	855	-	2880217	2881071	855	ORF	highly similar to B. subtilis DNA-binding protein Spo0J-like homolog YyaA	hypothetical protein - RAST_Product: Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J	Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J	Operon_506	Transcription	ATG	 
lmo2795	2881243	2882049	807	-	2881243	2882049	807	ORF	similar to E. coli RpiR transcription regulator	hypothetical protein - RAST_Product: Sialic acid utilization regulator, RpiR family	Sialic acid utilization regulator, RpiR family	Operon_507	Transcription	ATG	 
lmo2796	2882033	2882938	906	-	2882033	2882938	906	ORF	similar to transcription regulator	hypothetical protein - RAST_Product: N-acetylmannosamine kinase (EC 2.7.1.60)	N-acetylmannosamine kinase (EC 2.7.1.60)	Operon_507	"Transcription; Carbohydrate transport and metabolism;"	ATG	 
lmo2797	2882963	2883409	447	-	2882963	2883409	447	ORF	similar to phosphotransferase system mannitol-specific enzyme IIA	hypothetical protein - RAST_Product: PTS system, mannitol-specific IIA component (EC 2.7.1.69)	PTS system, mannitol-specific IIA component (EC 2.7.1.69)	Operon_507	"Carbohydrate transport and metabolism; Signal transduction mechanisms;"	ATG	 
lmo2798	2883422	2884078	657	-	2883422	2884078	657	ORF	similar to phosphatase	hypothetical protein - RAST_Product: hydrolase, haloacid dehalogenase-like family	hydrolase, haloacid dehalogenase-like family	Operon_507	General function prediction only	ATG	 
lmo2799	2884141	2885547	1407	-	2884141	2885547	1407	ORF	similar to phosphotransferase system mannitol-specific enzyme IIBC	hypothetical protein - RAST_Product: PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIC component (EC 2.7.1.69)	PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIC component (EC 2.7.1.69)	Operon_507	Carbohydrate transport and metabolism	ATG	 
lmo2800	2885581	2886582	1002	-	2885581	2886582	1002	ORF	similar to dehydrogenase	hypothetical protein - RAST_Product: oxidoreductase, Gfo/Idh/MocA family	oxidoreductase, Gfo/Idh/MocA family	Operon_507	General function prediction only	ATG	 
lmo2801	2886584	2887297	714	-	2886584	2887297	714	ORF	"similar to a putative N-acetylmannosamine-6-phosphate epimerase; Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate"	N-acetylmannosamine-6-phosphate 2-epimerase	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	Operon_507	Carbohydrate transport and metabolism	GTG	 
lmo2802	2887499	2888215	717	-	2887499	2888215	717	ORF	"glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA"	16S rRNA methyltransferase GidB	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB		Cell wall/membrane biogenesis	ATG	 
lmo2803	2888639	2889001	363	-	2888639	2889001	363	ORF	lmo2803	hypothetical protein - RAST_Product: FIG00774592: hypothetical protein	FIG00774592: hypothetical protein	Operon_508	Not in COGs	ATG	 
lmo2804	2888994	2890277	1284	-	2888994	2890277	1284	ORF	lmo2804	hypothetical protein - RAST_Product: FIG00774232: hypothetical protein	FIG00774232: hypothetical protein	Operon_508	Not in COGs	ATG	 
lmo2805	2890274	2890666	393	-	2890274	2890666	393	ORF	hypothetical secreted protein	hypothetical protein	hypothetical protein	Operon_508	Not in COGs	TTG	 
lmo2806	2890779	2891171	393	-	2890779	2891171	393	ORF	hypothetical secreted protein	hypothetical protein	hypothetical secreted protein		Not in COGs	TTG	 
lmo2807	2891269	2891652	384	-	2891269	2891652	384	ORF	hypothetical secreted protein	hypothetical protein	hypothetical secreted protein		Not in COGs	TTG	 
lmo2808	2891649	2892032	384	-	2891649	2892032	384	ORF	hypothetical secreted protein	hypothetical protein	hypothetical secreted protein		Not in COGs	TTG	 
lmo2809	2892057	2892437	381	-	2892057	2892437	381	ORF	hypothetical secreted protein	hypothetical protein	hypothetical secreted protein		Cell wall/membrane biogenesis	GTG	 
lmo2810	2892596	2894485	1890	-	2892596	2894485	1890	ORF	"highly similar to GidA protein; GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs"	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	Operon_509	Cell cycle control, mitosis and meiosis	ATG	 
lmo2811	2894510	2895883	1374	-	2894510	2895883	1374	ORF	"similar to GTPase; in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE"	tRNA modification GTPase TrmE	GTPase and tRNA-U34 5-formylation enzyme TrmE	Operon_509	General function prediction only	ATG	 
lmo2812	2896241	2897059	819	+	2896241	2897059	819	ORF	similar to D-alanyl-D-alanine carboxypeptidase	hypothetical protein - RAST_Product: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)		Cell wall/membrane biogenesis	ATG	 
lmo2813	2897116	2897823	708	-	2897116	2897823	708	ORF	lmo2813	hypothetical protein - RAST_Product: FIG00774137: hypothetical protein	FIG00774137: hypothetical protein	Operon_510	Not in COGs	ATG	 
lmo2814	2897847	2898374	528	-	2897847	2898374	528	ORF	similar to transcriptional regulator	hypothetical protein - RAST_Product: Transcriptional regulator, TetR family	Transcriptional regulator, TetR family	Operon_510	Transcription	ATG	 
lmo2815	2898535	2899266	732	+	2898535	2899266	732	ORF	"similar to reductases; catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis"	3-ketoacyl-(acyl-carrier-protein) reductase	oxidoreductase, short-chain dehydrogenase/reductase family		"Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism; General function prediction only;"	ATG	 
lmo2816	2899313	2900506	1194	-	2899313	2900506	1194	ORF	similar to transport protein	hypothetical protein - RAST_Product: major facilitator family transporter	major facilitator family transporter		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2817	2900594	2901784	1191	-	2900594	2901784	1191	ORF	similar to peptidases	hypothetical protein - RAST_Product: Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A	Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A	Operon_511	General function prediction only	ATG	 
lmo2818	2901800	2903200	1401	-	2901800	2903200	1401	ORF	similar to transmembrane efflux protein	hypothetical protein - RAST_Product: putative transporter	putative transporter	Operon_511	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2819	2903200	2904402	1203	-	2903200	2904402	1203	ORF	similar to carboxypeptidase	hypothetical protein	Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A	Operon_511	General function prediction only	ATG	 
lmo2820	2904598	2906940	2343	-	2904598	2906940	2343	ORF		amino-terminal domain-containing protein	Transcriptional regulator, AraC family / Glycoside hydrolase		"Transcription; Carbohydrate transport and metabolism;"	GTG	 
lmo2821	2907153	2909708	2556	+	2907153	2909708	2556	ORF	similar to internalin, Unknown, putative peptidoglycan bound protein (LPXTG motif)	hypothetical protein - RAST_Product: Internalin-like protein (LPXTG motif) Lmo2821 homolog	Internalin-like protein (LPXTG motif) Lmo2821 homolog		Cell wall/membrane biogenesis	TTG	 
lmo2822	2909753	2910076	324	-	2909753	2910076	324	ORF	lmo2822	hypothetical protein	FIG00774271: hypothetical protein	Operon_512	Not in COGs	ATG	 
lmo2823	2910085	2911326	1242	-	2910085	2911326	1242	ORF	similar to an hypothetical protein from Thermotoga maritima	hypothetical protein - RAST_Product: FIG00774031: hypothetical protein	FIG00774031: hypothetical protein	Operon_512	Function unknown	ATG	 
lmo2824	2911415	2912602	1188	-	2911415	2912602	1188	ORF	similar to D-3-phosphoglycerate dehydrogenase	hypothetical protein - RAST_Product: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	Operon_512	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	GTG	 
lmo2825	2912595	2913686	1092	-	2912595	2913686	1092	ORF	"highly similar to phosphoserine aminotransferase; catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine"	phosphoserine aminotransferase	Phosphoserine aminotransferase (EC 2.6.1.52)	Operon_512	"Amino acid transport and metabolism; Coenzyme transport and metabolism;"	GTG	 
lmo2826	2914057	2915205	1149	-	2914057	2915205	1149	ORF	similar to efflux proteins	hypothetical protein	transporter	Operon_513	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	TTG	 
lmo2827	2915219	2915641	423	-	2915219	2915641	423	ORF	similar to transcriptional regulator (MarR family)	hypothetical protein	Transcriptional regulator, MarR family	Operon_513	Transcription	ATG	 
lmo2828	2915744	2916097	354	-	2915744	2916097	354	ORF	lmo2828	hypothetical protein - RAST_Product: FIG00774082: hypothetical protein	FIG00774082: hypothetical protein		Not in COGs	ATG	 
lmo2829	2916291	2916890	600	+	2916291	2916890	600	ORF	similar to yeast protein Frm2p involved in fatty acid signaling	hypothetical protein - RAST_Product: Nitroreductase family protein	Nitroreductase family protein		General function prediction only	ATG	 
lmo2830	2916946	2917266	321	-	2916946	2917266	321	ORF	similar to thioredoxin	hypothetical protein - RAST_Product: Thioredoxin	Thioredoxin	Operon_514	"Posttranslational modification, protein turnover, chaperones; Energy production and conversion;"	ATG	 
lmo2831	2917389	2918051	663	-	2917389	2918051	663	ORF	similar to phosphoglucomutase	hypothetical protein - RAST_Product: Beta-phosphoglucomutase (EC 5.4.2.6)	Beta-phosphoglucomutase (EC 5.4.2.6)	Operon_514	General function prediction only	ATG	 
lmo2832	2918048	2919169	1122	-	2918048	2919169	1122	ORF		hypothetical protein - RAST_Product: Glycerate kinase (EC 2.7.1.31)	Glycerate kinase (EC 2.7.1.31)	Operon_514	Carbohydrate transport and metabolism	ATG	 
lmo2833	2919166	2921343	2178	-	2919166	2921343	2178	ORF	similar to a maltose phosphorylase	hypothetical protein - RAST_Product: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)	Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)		Carbohydrate transport and metabolism	ATG	 
lmo2834	2921340	2922371	1032	-	2921340	2922371	1032	ORF	similar to oxidoreductases	hypothetical protein - RAST_Product: Putative oxidoreductase YcjS (EC 1.-.-.-), NADH-binding	Putative oxidoreductase YcjS (EC 1.-.-.-), NADH-binding		General function prediction only	ATG	 
lmo2835	2922429	2923223	795	-	2922429	2923223	795	ORF	highly similar to an E. coli protein	hypothetical protein - RAST_Product: Sugar phosphate isomerases/epimerases family protein YcjR	Sugar phosphate isomerases/epimerases family protein YcjR		Carbohydrate transport and metabolism	ATG	 
lmo2836	2923236	2924288	1053	-	2923236	2924288	1053	ORF	similar to alcohol dehydrogenase	hypothetical protein - RAST_Product: Zinc-type alcohol dehydrogenase YcjQ	Zinc-type alcohol dehydrogenase YcjQ		"Amino acid transport and metabolism; General function prediction only;"	ATG	 
lmo2837	2924307	2925158	852	-	2924307	2925158	852	ORF	similar to sugar ABC transporter permease protein	hypothetical protein - RAST_Product: Inner membrane ABC transporter permease protein YcjP	Inner membrane ABC transporter permease protein YcjP		Carbohydrate transport and metabolism	ATG	 
lmo2838	2925145	2926026	882	-	2925145	2926026	882	ORF	similar to sugar ABC transporter permease protein	hypothetical protein - RAST_Product: Inner membrane ABC transporter permease protein YcjO	Inner membrane ABC transporter permease protein YcjO		Carbohydrate transport and metabolism	ATG	 
lmo2839	2926101	2927393	1293	-	2926101	2927393	1293	ORF	similar to sugar binding protein (ABC transporter)	hypothetical protein - RAST_Product: ABC-type sugar transport system, periplasmic binding protein YcjN	ABC-type sugar transport system, periplasmic binding protein YcjN		Carbohydrate transport and metabolism	ATG	 
lmo2840	2927390	2928631	1242	-	2927390	2928631	1242	ORF	similar to Sucrose phosphorylase	hypothetical protein	Putative sucrose phosphorylase (EC 2.4.1.7)		Carbohydrate transport and metabolism	GTG	 
lmo2841	2928668	2929090	423	-	2928668	2929090	423	ORF	weakly similar to sucrose phosphorylase	hypothetical protein - RAST_Product: Putative sucrose phosphorylase (EC 2.4.1.7)	Putative sucrose phosphorylase (EC 2.4.1.7)		Carbohydrate transport and metabolism	ATG	 
lmo2842	2929315	2930340	1026	+	2929315	2930340	1026	ORF	similar to transcriptional regulator	hypothetical protein - RAST_Product: Transcriptional regulator YcjW, LacI family, possibly involved in maltodextrin utilization pathway	Transcriptional regulator YcjW, LacI family, possibly involved in maltodextrin utilization pathway		Transcription	TTG	 
lmo2843	2930479	2932473	1995	-	2930479	2932473	1995	ORF	lmo2843	hypothetical protein - RAST_Product: FIG00774131: hypothetical protein	FIG00774131: hypothetical protein	Operon_515	"Transcription; Amino acid transport and metabolism;"	ATG	 
lmo2844	2932609	2933148	540	-	2932609	2933148	540	ORF		hypothetical protein - RAST_Product: spermidine N1-acetyltransferase	spermidine N1-acetyltransferase	Operon_515	Translation	ATG	 
lmo2845	2933303	2934715	1413	+	2933303	2934715	1413	ORF	similar to transmembrane efflux proteins	hypothetical protein - RAST_Product: putative transmembrane efflux protein	putative transmembrane efflux protein		"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2846	2934756	2935070	315	-	2934756	2935070	315	ORF	highly similar to B. subtilis YulD protein	hypothetical protein - RAST_Product: L-rhamnose mutarotase	L-rhamnose mutarotase	Operon_516	Function unknown	ATG	 
lmo2847	2935083	2935904	822	-	2935083	2935904	822	ORF	highly similar to rhamnulose-1-phosphate aldolase	rhamnulose-1-phosphate aldolase	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)	Operon_516	Carbohydrate transport and metabolism	ATG	 
lmo2848	2935917	2937179	1263	-	2935917	2937179	1263	ORF	"highly similar to L-rhamnose isomerase; catalyzes the formation of L-rhamnulose from L-rhamnose"	L-rhamnose isomerase	L-rhamnose isomerase (EC 5.3.1.14)	Operon_516	Carbohydrate transport and metabolism	ATG	 
lmo2849	2937192	2938643	1452	-	2937192	2938643	1452	ORF	similar to rhamnulokinase	hypothetical protein - RAST_Product: Rhamnulokinase (EC 2.7.1.5)	Rhamnulokinase (EC 2.7.1.5)	Operon_516	Carbohydrate transport and metabolism	GTG	 
lmo2850	2938662	2939930	1269	-	2938662	2939930	1269	ORF	similar to sugar transport proteins	hypothetical protein - RAST_Product: Predicted L-rhamnose permease RhaY	Predicted L-rhamnose permease RhaY	Operon_516	"Carbohydrate transport and metabolism; Amino acid transport and metabolism; Inorganic ion transport and metabolism; General function prediction only;"	ATG	 
lmo2851	2940053	2941033	981	+	2940053	2941033	981	ORF	similar to AraC-type regulatory protein	hypothetical protein - RAST_Product: Transcriptional regulator of rhamnose utilization, AraC family	Transcriptional regulator of rhamnose utilization, AraC family		Transcription	ATG	 
lmo2852	2941083	2941544	462	-	2941083	2941544	462	ORF	lmo2852	hypothetical protein - RAST_Product: FIG00774123: hypothetical protein	FIG00774123: hypothetical protein		Function unknown	GTG	 
lmo2853	2941599	2942219	621	-	2941599	2942219	621	ORF	highly similar to B. subtilis Jag protein	hypothetical protein - RAST_Product: RNA-binding protein Jag	RNA-binding protein Jag	Operon_517	General function prediction only	GTG	 
lmo2854	2942216	2943079	864	-	2942216	2943079	864	ORF	highly similar to B. subtilis SpoIIIJ protein	hypothetical protein - RAST_Product: Inner membrane protein translocase component YidC, short form OxaI-like	Inner membrane protein translocase component YidC, short form OxaI-like	Operon_517	Intracellular trafficking and secretion	TTG	 
lmo2855	2943120	2943479	360	-	2943120	2943479	360	ORF	"protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates"	ribonuclease P	Ribonuclease P protein component (EC 3.1.26.5)	Operon_517	Translation	ATG	 
lmo2856	2943569	2943703	135	-	2943569	2943703	135	ORF	in Escherichia coli transcription of this gene is enhanced by polyamines	50S ribosomal protein L34	LSU ribosomal protein L34p		Translation	ATG	 
lmo2857	2943871	2944341	471	-	2943871	2944341	471	ORF		hypothetical protein - RAST_Product: FIG00774274: hypothetical protein	FIG00774274: hypothetical protein		Not in COGs	ATG	 
lmor01	237466	239020	1555	+	237466	239020	1555	rRNA	16S ribosomal RNA						
lmor02	239265	242195	2931	+	239265	242195	2931	rRNA	23S ribosomal RNA						
lmor03	242276	242385	110	+	242276	242385	110	rRNA	5S ribosomal RNA						
lmor04	243556	245041	1486	+	243556	245041	1486	rRNA	16S ribosomal RNA						
lmor05	245286	248216	2931	+	245286	248216	2931	rRNA	23S ribosomal RNA						
lmor06	248297	248406	110	+	248297	248406	110	rRNA	5S ribosomal RNA						
lmor07	1742900	1743009	110	-	1742900	1743009	110	rRNA	5S ribosomal RNA						
lmor08	1743091	1746021	2931	-	1743091	1746021	2931	rRNA	23S ribosomal RNA						
lmor09	1746266	1747811	1546	-	1746266	1747811	1546	rRNA	16S ribosomal RNA						
lmor10	1848821	1848930	110	-	1848821	1848930	110	rRNA	5S ribosomal RNA						
lmor11	1849012	1851942	2931	-	1849012	1851942	2931	rRNA	23S ribosomal RNA						
lmor12	1852187	1853732	1546	-	1852187	1853732	1546	rRNA	16S ribosomal RNA						
lmor13	2437842	2437951	110	-	2437842	2437951	110	rRNA	5S ribosomal RNA						
lmor14	2438032	2440962	2931	-	2438032	2440962	2931	rRNA	23S ribosomal RNA						
lmor15	2441458	2443003	1546	-	2441458	2443003	1546	rRNA	16S ribosomal RNA						
lmor16	2672851	2672960	110	-	2672851	2672960	110	rRNA	5S ribosomal RNA						
lmor17	2673041	2675971	2931	-	2673041	2675971	2931	rRNA	23S ribosomal RNA						
lmor18	2676467	2678012	1546	-	2676467	2678012	1546	rRNA	16S ribosomal RNA						
lmot01	82705	82777	73	+	82705	82777	73	tRNA	tRNA-Lys	tRNAscan-SE vs 1.3 result - Cove score = 78.43					
lmot02	242399	242471	73	+	242399	242471	73	tRNA	tRNA-Val	tRNAscan-SE vs 1.3 result - Cove score = 86.53					
lmot03	242480	242555	76	+	242480	242555	76	tRNA	tRNA-Thr	tRNAscan-SE vs 1.3 result - Cove score = 95.38					
lmot04	242597	242669	73	+	242597	242669	73	tRNA	tRNA-Lys	tRNAscan-SE vs 1.3 result - Cove score = 88.37					
lmot05	242675	242756	82	+	242675	242756	82	tRNA	tRNA-Leu	tRNAscan-SE vs 1.3 result - Cove score = 69.82					
lmot06	242771	242842	72	+	242771	242842	72	tRNA	tRNA-Gly	tRNAscan-SE vs 1.3 result - Cove score = 79.58					
lmot07	242864	242949	86	+	242864	242949	86	tRNA	tRNA-Leu	tRNAscan-SE vs 1.3 result - Cove score = 66.88					
lmot08	242962	243035	74	+	242962	243035	74	tRNA	tRNA-Arg	tRNAscan-SE vs 1.3 result - Cove score = 74.21					
lmot09	243046	243119	74	+	243046	243119	74	tRNA	tRNA-Pro	tRNAscan-SE vs 1.3 result - Cove score = 86.85					
lmot10	243139	243214	76	+	243139	243214	76	tRNA	tRNA-Ala	tRNAscan-SE vs 1.3 result - Cove score = 92.94					
lmot11	677464	677553	90	-	677464	677553	90	tRNA	tRNA-Ser	tRNAscan-SE vs 1.3 result - Cove score = 65.56					
lmot12	936656	936728	73	+	936656	936728	73	tRNA	tRNA-Asn	tRNAscan-SE vs 1.3 result - Cove score = 85.46					
lmot13	936732	936819	88	+	936732	936819	88	tRNA	tRNA-Ser	tRNAscan-SE vs 1.3 result - Cove score = 53.95					
lmot14	940017	940088	72	+	940017	940088	72	tRNA	tRNA-Glu	tRNAscan-SE vs 1.3 result - Cove score = 70.15					
lmot15	940116	940188	73	+	940116	940188	73	tRNA	tRNA-Asp	tRNAscan-SE vs 1.3 result - Cove score = 65.02					
lmot16	970867	970937	71	+	970867	970937	71	tRNA	tRNA-Gly	tRNAscan-SE vs 1.3 result - Cove score = 73.1					
lmot17	1266675	1266748	74	+	1266675	1266748	74	tRNA	tRNA-Arg	tRNAscan-SE vs 1.3 result - Cove score = 82.37					
lmot18	1740916	1740987	72	-	1740916	1740987	72	tRNA	tRNA-Glu	tRNAscan-SE vs 1.3 result - Cove score = 70.15					
lmot19	1740993	1741083	91	-	1740993	1741083	91	tRNA	tRNA-Ser	tRNAscan-SE vs 1.3 result - Cove score = 63.76					
lmot20	1741118	1741190	73	-	1741118	1741190	73	tRNA	tRNA-Asn	tRNAscan-SE vs 1.3 result - Cove score = 85.46					
lmot21	1741197	1741270	74	-	1741197	1741270	74	tRNA	tRNA-Ile	tRNAscan-SE vs 1.3 result - Cove score = 92.91					
lmot22	1741296	1741366	71	-	1741296	1741366	71	tRNA	tRNA-Gly	tRNAscan-SE vs 1.3 result - Cove score = 73.1					
lmot23	1741390	1741462	73	-	1741390	1741462	73	tRNA	tRNA-His	tRNAscan-SE vs 1.3 result - Cove score = 72.11					
lmot24	1741491	1741563	73	-	1741491	1741563	73	tRNA	tRNA-Phe	tRNAscan-SE vs 1.3 result - Cove score = 79.39					
lmot25	1741568	1741643	76	-	1741568	1741643	76	tRNA	tRNA-Asp	tRNAscan-SE vs 1.3 result - Cove score = 73.32					
lmot26	1741648	1741721	74	-	1741648	1741721	74	tRNA	tRNA-Met	tRNAscan-SE vs 1.3 result - Cove score = 78.6					
lmot27	1741764	1741853	90	-	1741764	1741853	90	tRNA	tRNA-Ser	tRNAscan-SE vs 1.3 result - Cove score = 66.89					
lmot28	1741876	1741949	74	-	1741876	1741949	74	tRNA	tRNA-Met	tRNAscan-SE vs 1.3 result - Cove score = 90.88					
lmot29	1741961	1742034	74	-	1741961	1742034	74	tRNA	tRNA-Met	tRNAscan-SE vs 1.3 result - Cove score = 76.18					
lmot30	1742077	1742149	73	-	1742077	1742149	73	tRNA	tRNA-Ala	tRNAscan-SE vs 1.3 result - Cove score = 84.64					
lmot31	1742172	1742245	74	-	1742172	1742245	74	tRNA	tRNA-Pro	tRNAscan-SE vs 1.3 result - Cove score = 86.85					
lmot32	1742256	1742329	74	-	1742256	1742329	74	tRNA	tRNA-Arg	tRNAscan-SE vs 1.3 result - Cove score = 74.21					
lmot33	1742339	1742424	86	-	1742339	1742424	86	tRNA	tRNA-Leu	tRNAscan-SE vs 1.3 result - Cove score = 66.88					
lmot34	1742439	1742513	75	-	1742439	1742513	75	tRNA	tRNA-Gly	tRNAscan-SE vs 1.3 result - Cove score = 87.88					
lmot35	1742529	1742610	82	-	1742529	1742610	82	tRNA	tRNA-Leu	tRNAscan-SE vs 1.3 result - Cove score = 69.82					
lmot36	1742616	1742688	73	-	1742616	1742688	73	tRNA	tRNA-Lys	tRNAscan-SE vs 1.3 result - Cove score = 88.37					
lmot37	1742730	1742805	76	-	1742730	1742805	76	tRNA	tRNA-Thr	tRNAscan-SE vs 1.3 result - Cove score = 95.38					
lmot38	1742814	1742886	73	-	1742814	1742886	73	tRNA	tRNA-Val	tRNAscan-SE vs 1.3 result - Cove score = 86.53					
lmot39	1776112	1776183	72	+	1776112	1776183	72	tRNA	tRNA-Arg	tRNAscan-SE vs 1.3 result - Cove score = 58.15					
lmot40	2162187	2162273	87	+	2162187	2162273	87	tRNA	tRNA-Leu	tRNAscan-SE vs 1.3 result - Cove score = 59.49					
lmot41	2215375	2215446	72	+	2215375	2215446	72	tRNA	tRNA-Glu	tRNAscan-SE vs 1.3 result - Cove score = 70.15					
lmot42	2215604	2215677	74	+	2215604	2215677	74	tRNA	tRNA-Thr	tRNAscan-SE vs 1.3 result - Cove score = 78.67					
lmot43	2215687	2215770	84	+	2215687	2215770	84	tRNA	tRNA-Tyr	tRNAscan-SE vs 1.3 result - Cove score = 78.87					
lmot44	2215782	2215856	75	+	2215782	2215856	75	tRNA	tRNA-Gln	tRNAscan-SE vs 1.3 result - Cove score = 68.97					
lmot45	2215863	2215935	73	+	2215863	2215935	73	tRNA	tRNA-Lys	tRNAscan-SE vs 1.3 result - Cove score = 88.37					
lmot46	2436493	2436576	84	-	2436493	2436576	84	tRNA	tRNA-Leu	tRNAscan-SE vs 1.3 result - Cove score = 65.94					
lmot47	2436622	2436695	74	-	2436622	2436695	74	tRNA	tRNA-Cys	tRNAscan-SE vs 1.3 result - Cove score = 79.62					
lmot48	2436715	2436786	72	-	2436715	2436786	72	tRNA	tRNA-Gly	tRNAscan-SE vs 1.3 result - Cove score = 78.73					
lmot49	2436792	2436863	72	-	2436792	2436863	72	tRNA	tRNA-Gln	tRNAscan-SE vs 1.3 result - Cove score = 67.55					
lmot50	2436893	2436965	73	-	2436893	2436965	73	tRNA	tRNA-His	tRNAscan-SE vs 1.3 result - Cove score = 72.91					
lmot51	2436981	2437054	74	-	2436981	2437054	74	tRNA	tRNA-Trp	tRNAscan-SE vs 1.3 result - Cove score = 61.92					
lmot52	2437062	2437145	84	-	2437062	2437145	84	tRNA	tRNA-Tyr	tRNAscan-SE vs 1.3 result - Cove score = 78.87					
lmot53	2437166	2437238	73	-	2437166	2437238	73	tRNA	tRNA-Phe	tRNAscan-SE vs 1.3 result - Cove score = 79.39					
lmot54	2437243	2437318	76	-	2437243	2437318	76	tRNA	tRNA-Asp	tRNAscan-SE vs 1.3 result - Cove score = 73.32					
lmot55	2437325	2437398	74	-	2437325	2437398	74	tRNA	tRNA-Met	tRNAscan-SE vs 1.3 result - Cove score = 78.6					
lmot56	2437420	2437495	76	-	2437420	2437495	76	tRNA	tRNA-Val	tRNAscan-SE vs 1.3 result - Cove score = 94.83					
lmot57	2437552	2437623	72	-	2437552	2437623	72	tRNA	tRNA-Glu	tRNAscan-SE vs 1.3 result - Cove score = 70.15					
lmot58	2437657	2437745	89	-	2437657	2437745	89	tRNA	tRNA-Ser	tRNAscan-SE vs 1.3 result - Cove score = 56.77					
lmot59	2437752	2437827	76	-	2437752	2437827	76	tRNA	tRNA-Asn	tRNAscan-SE vs 1.3 result - Cove score = 93.76					
lmot60	2441135	2441210	76	-	2441135	2441210	76	tRNA	tRNA-Ala	tRNAscan-SE vs 1.3 result - Cove score = 92.94					
lmot61	2441257	2441330	74	-	2441257	2441330	74	tRNA	tRNA-Ile	tRNAscan-SE vs 1.3 result - Cove score = 92.91					
lmot62	2540230	2540301	72	-	2540230	2540301	72	tRNA	tRNA-Arg	tRNAscan-SE vs 1.3 result - Cove score = 57.38					
lmot63	2672664	2672736	73	-	2672664	2672736	73	tRNA	tRNA-Thr	tRNAscan-SE vs 1.3 result - Cove score = 79.98					
lmot64	2672761	2672836	76	-	2672761	2672836	76	tRNA	tRNA-Asn	tRNAscan-SE vs 1.3 result - Cove score = 93.76					
lmot65	2676144	2676219	76	-	2676144	2676219	76	tRNA	tRNA-Ala	tRNAscan-SE vs 1.3 result - Cove score = 92.94					
lmot66	2676266	2676339	74	-	2676266	2676339	74	tRNA	tRNA-Ile	tRNAscan-SE vs 1.3 result - Cove score = 92.91					
lmot67	2930362	2930434	73	+	2930362	2930434	73	tRNA	tRNA-Val	tRNAscan-SE vs 1.3 result - Cove score = 68.03					
pan	1977152	1977238	87	-	1977152	1977238	87	CisReg	Rfam		"Rfam 2012;"				
rli1 - LhrC-1	231884	231994	111	+	231884	231994	111	Srna	Christiansen et al. 2006	LhrC-1, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli10 - rliD	1359202	1359529	328	-	1359202	1359529	328	Srna	Mandin et al. 2007	rliD, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli100	2424807	2424866	60	-	2424807	2424866	60	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli101	2452913	2452994	82	-	2452913	2452994	82	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli102	2454489	2454690	202	+	2454489	2454690	202	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli103	2498270	2498344	75	-	2498270	2498344	75	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli104	2505181	2505340	160	-	2505181	2505340	160	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli105	2533481	2533615	135	-	2533481	2533615	135	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli106	2594561	2594785	225	-	2594561	2594785	225	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli107	2632700	2632770	71	-	2632700	2632770	71	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli108	2639710	2639789	80	-	2639710	2639789	80	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli109	2694509	2694694	186	-	2694509	2694694	186	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli11 - sbrA	1399365	1399616	252	+	1399365	1399616	252	Srna	Nielsen et al. 2008	Rli11-sbrA, sbrA, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;Oliver et al. 2009;"				
rli110	2730489	2730555	67	+	2730489	2730555	67	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli111	2736457	2736640	184	+	2736457	2736640	184	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli112	2782958	2783091	134	+	2782958	2783091	134	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;Wurtzel et al. 2012;"				
rli113	2839401	2839573	173	-	2839401	2839573	173	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli114	2857252	2857320	69	-	2857252	2857320	69	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli115	77597	77863	267	+	77597	77863	267	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;"				
rli116	143795	144000	206	+	143795	144000	206	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;"				
rli117	145571	145841	271	+	145571	145841	271	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;"				
rli118	199775	199884	110	+	199775	199884	110	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;"				
rli119	215458	215587	130	-	215458	215587	130	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli12 - ssrS-6S	1546336	1546531	196	-	1546336	1546531	196	Srna	Mandin et al. 2007	ssrS, ssrS-6S, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
rli120	226546	226640	95	+	226546	226640	95	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli121	495786	496381	596	+	495786	496381	596	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli122	507021	507161	141	-	507021	507161	141	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli123	862938	863241	304	+	862938	863241	304	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli124	1057361	1057621	261	-	1057361	1057621	261	Srna	Wurtzel et al. 2012	rli66, 	"Wurtzel et al. 2012;Oliver et al. 2009;"				
rli125	1154319	1154671	353	-	1154319	1154671	353	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli126	1159877	1160115	239	+	1159877	1160115	239	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli127	1473701	1473829	129	-	1473701	1473829	129	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli128	1575917	1575995	79	-	1575917	1575995	79	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli129	1613300	1613451	152	-	1613300	1613451	152	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli13 - rliE	1584586	1584808	223	+	1584586	1584808	223	Srna	Mandin et al. 2007	rliE, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli130	2008753	2008871	119	-	2008753	2008871	119	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli131	2031272	2031354	83	-	2031272	2031354	83	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli132	2109721	2109972	252	-	2109721	2109972	252	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli133	2145524	2145648	125	-	2145524	2145648	125	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli134	2151510	2151605	96	-	2151510	2151605	96	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli135	2213168	2213213	46	-	2213168	2213213	46	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli136	2286256	2286586	331	-	2286256	2286586	331	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli137	2293286	2293472	187	+	2293286	2293472	187	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli138	2321818	2322026	209	+	2321818	2322026	209	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli139	2321818	2321967	150	-	2321818	2321967	150	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli14 - LhrB	1859870	1860017	148	-	1859870	1860017	148	Srna	Christiansen et al. 2006	LhrB, LhrB-L20, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
rli140	2395032	2395244	213	-	2395032	2395244	213	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli141	2399283	2399512	230	+	2399283	2399512	230	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli142	2569572	2569681	110	+	2569572	2569681	110	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli143	2584861	2585032	172	-	2584861	2585032	172	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli144	2640531	2640819	289	-	2640531	2640819	289	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli145	2794580	2794741	162	-	2794580	2794741	162	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli146	318784	318834	51	+	318784	318834	51	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli147	2784594	2784775	182	-	2784594	2784775	182	Srna	Wurtzel et al. 2012		"Wurtzel et al. 2012;"				
rli148 - sbrB	1275554	1275719	166	+	1275554	1275719	166	Srna	Oliver et al. 2009	sbrB, 	"Oliver et al. 2009;"				
rli149 - sbrD	2613033	2613100	68	+	2613033	2613100	68	Srna	Oliver et al. 2009	sbrD, 	"Oliver et al. 2009;"				
rli15 - rnpB	1961807	1962188	382	-	1961807	1962188	382	Srna	Mandin et al. 2007	RNaseP_bact_b, rnpB, rnpB-RNase P, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;Mraheil et al. 2011;"				
rli16 - rliF	2106073	2106292	220	-	2106073	2106292	220	Srna	Mandin et al. 2007	rliF, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli17 - LhrA	2346166	2346382	217	-	2346166	2346382	217	Srna	Christiansen et al. 2006	LhrA, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli18 - rliG	2386715	2386992	278	-	2386715	2386992	278	Srna	Mandin et al. 2007	rliG, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
rli19 - ssrA	2509852	2510220	369	-	2509852	2510220	369	Srna	Mandin et al. 2007	ssrA, ssrA-tmRNA, tmRNA, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;Mraheil et al. 2011;"				
rli2 - LhrC-2	232086	232197	112	+	232086	232197	112	Srna	Christiansen et al. 2006	LhrC-2, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli20 - SRP	2784311	2784413	103	-	2784311	2784413	103	Srna	Barry et al. 1999	Bacteria_large_SRP, Bacteria_small_SRP, SRP, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;Rfam 2012-2;"				
rli21 - rliI	2841962	2842199	238	-	2841962	2842199	238	Srna	Mandin et al. 2007	rliI, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli22	31997	32107	111	+	31997	32107	111	Srna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;Rfam 2012;"				
rli23	172171	172268	98	+	172171	172268	98	Srna	Toledo-Arana et al. 2009	rli23-1, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli24	271014	271201	188	+	271014	271201	188	Srna	Toledo-Arana et al. 2009		"Mraheil et al. 2011;Toledo-Arana et al. 2009;Wurtzel et al. 2012;Rfam 2012;Oliver et al. 2009;"				
rli25	357516	357618	103	-	357516	357618	103	Srna	Toledo-Arana et al. 2009	rli23-2, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli26	388590	388707	118	-	388590	388707	118	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;"				
rli27	434817	434929	113	+	434817	434929	113	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli28	507141	507372	232	-	507141	507372	232	Srna	Toledo-Arana et al. 2009	rli28-1, 	"Wurtzel et al. 2012;Mraheil et al. 2011;Toledo-Arana et al. 2009;Rfam 2012;"				
rli28-2	2039064	2039248	185	+	2039064	2039248	185	Srna	Toledo-Arana et al. 2009		"Rfam 2012;"				
rli28-3	2154893	2155080	188	-	2154893	2155080	188	Srna	Toledo-Arana et al. 2009		"Rfam 2012;"				
rli29	507450	507632	183	-	507450	507632	183	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
rli3 - LhrC-3	232289	232400	112	+	232289	232400	112	Srna	Christiansen et al. 2006	LhrC-3, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli30	540670	540785	116	-	540670	540785	116	Srna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;"				
rli31	597806	597926	121	+	597806	597926	121	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;Oliver et al. 2009;"				
rli32	600604	600750	147	-	600604	600750	147	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli33	708618	708860	243	+	708618	708860	243	Srna	Toledo-Arana et al. 2009	rli33-2, 	"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli33-2	708309	708494	186	+	708309	708494	186	Srna	Toledo-Arana et al. 2009	rli33-1, 	"Mraheil et al. 2011;"				
rli33-3	708326	708860	535	+	708326	708860	535	Srna	Toledo-Arana et al. 2009	rli33, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli34	802948	803031	84	-	802948	803031	84	Srna	Toledo-Arana et al. 2009	rli34-2, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli34-2	678220	678303	84	-	678220	678303	84	Srna	Toledo-Arana et al. 2009	rli34-1, 	"Rfam 2012;"				
rli35	855393	855495	103	-	855393	855495	103	Srna	Toledo-Arana et al. 2009	rli23-3, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli36	859412	859521	110	-	859412	859521	110	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;"				
rli37	907526	907832	307	+	907526	907832	307	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;"				
rli38	1152549	1152917	369	+	1152549	1152917	369	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Rfam 2012;Toledo-Arana et al. 2009;"				
rli39	1179807	1179993	187	+	1179807	1179993	187	Srna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;Oliver et al. 2009;"				
rli4 - LhrC-4	232492	232605	114	+	232492	232605	114	Srna	Christiansen et al. 2006	LhrC-4, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli40	1275547	1275794	248	-	1275547	1275794	248	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;"				
rli41	1276713	1277206	494	-	1276713	1277206	494	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Toledo-Arana et al. 2009;Rfam 2012;"				
rli42	1399461	1399616	156	-	1399461	1399616	156	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli43	1861377	1861533	157	-	1861377	1861533	157	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;"				
rli44	2039087	2039375	289	+	2039087	2039375	289	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Oliver et al. 2009;"				
rli45	2154765	2154852	88	+	2154765	2154852	88	Srna	Toledo-Arana et al. 2009	RatA-3, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli45-2	2153775	2153852	78	+	2153775	2153852	78	Srna	Toledo-Arana et al. 2009	rli45, 	"Rfam 2012;"				
rli46	2154765	2155058	294	-	2154765	2155058	294	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
rli47	2226036	2226481	446	+	2226036	2226481	446	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;Oliver et al. 2009;Mraheil et al. 2011;"				
rli48	2361274	2361405	132	-	2361274	2361405	132	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli49	2660210	2660364	155	+	2660210	2660364	155	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;"				
rli5 - rliA	513584	513807	224	+	513584	513807	224	Srna	Mandin et al. 2007	rliA, 	"Toledo-Arana et al. 2009;Rfam 2012;"				
rli50	2782981	2783264	284	-	2782981	2783264	284	Srna	Toledo-Arana et al. 2009	rli28-4, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;Mraheil et al. 2011;"				
rli51	207589	207709	121	+	207589	207709	121	Srna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;Mraheil et al. 2011;Oliver et al. 2009;Rfam 2012;"				
rli52	552327	552421	95	-	552327	552421	95	Srna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;Mraheil et al. 2011;Wurtzel et al. 2012;Rfam 2012;"				
rli53	955824	956021	198	+	955824	956021	198	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Oliver et al. 2009;Toledo-Arana et al. 2009;Rfam 2012;"				
rli54	1078584	1079111	528	+	1078584	1079111	528	Srna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;Rfam 2012;"				
rli55	1198108	1198561	454	+	1198108	1198561	454	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Toledo-Arana et al. 2009;"				
rli56	1199848	1199937	90	+	1199848	1199937	90	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Toledo-Arana et al. 2009;Rfam 2012;"				
rli57	1216658	1216957	300	+	1216658	1216957	300	Srna	Toledo-Arana et al. 2009		"Toledo-Arana et al. 2009;"				
rli58	1639915	1640132	218	-	1639915	1640132	218	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Toledo-Arana et al. 2009;"				
rli59	1702361	1702543	183	-	1702361	1702543	183	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Rfam 2012;Toledo-Arana et al. 2009;"				
rli6 - rliB	544238	544716	479	+	544238	544716	479	Srna	Mandin et al. 2007	rliB, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;Oliver et al. 2009;"				
rli60	2054162	2054501	340	+	2054162	2054501	340	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Toledo-Arana et al. 2009;"				
rli61	2275297	2275362	66	-	2275297	2275362	66	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Rfam 2012;Mraheil et al. 2011;"				
rli62	2364321	2364439	119	-	2364321	2364439	119	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Rfam 2012;Mraheil et al. 2011;"				
rli63	2612921	2613300	380	-	2612921	2613300	380	Srna	Toledo-Arana et al. 2009		"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;"				
rli65	531148	531266	119	+	531148	531266	119	Srna	Oliver et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;Oliver et al. 2009;"				
rli66	1057315	1057642	328	-	1057315	1057642	328	Srna	Oliver et al. 2009	rli124, 	"Oliver et al. 2009;Wurtzel et al. 2012;"				
rli67	1535169	1535409	241	-	1535169	1535409	241	Srna	Oliver et al. 2009		"Oliver et al. 2009;"				
rli68	2174995	2175265	271	+	2174995	2175265	271	Srna	Oliver et al. 2009		"Oliver et al. 2009;"				
rli69	2468115	2468289	175	+	2468115	2468289	175	Srna	Oliver et al. 2009		"Oliver et al. 2009;"				
rli7 - LhrC-5	981621	981731	111	+	981621	981731	111	Srna	Christiansen et al. 2006	LhrC-5, 	"Wurtzel et al. 2012;Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"				
rli70	2533504	2533732	229	+	2533504	2533732	229	Srna	Oliver et al. 2009		"Oliver et al. 2009;"				
rli71	28964	29061	98	+	28964	29061	98	Srna	Oliver et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli72	200410	200519	110	+	200410	200519	110	Srna	Oliver et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli73	200942	201217	276	+	200942	201217	276	Srna	Oliver et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli74	209321	209453	133	+	209321	209453	133	Srna	Oliver et al. 2009		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli75	321290	321363	74	+	321290	321363	74	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli76	344675	344771	97	-	344675	344771	97	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli77	454095	454227	133	+	454095	454227	133	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli78	507068	507473	406	+	507068	507473	406	Srna	Mraheil et al. 2011	RatA-1, 	"Wurtzel et al. 2012;Mraheil et al. 2011;Rfam 2012;"				
rli79	696818	696880	63	+	696818	696880	63	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli8 - rliC	1154414	1154674	261	+	1154414	1154674	261	Srna	Mandin et al. 2007	rliC, 	"Mraheil et al. 2011;Toledo-Arana et al. 2009;"				
rli80	787038	787254	217	+	787038	787254	217	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli81	905685	905801	117	+	905685	905801	117	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli82	910875	910942	68	-	910875	910942	68	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli83	926922	927039	118	+	926922	927039	118	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli84	1093855	1093954	100	+	1093855	1093954	100	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli85	1154617	1154762	146	-	1154617	1154762	146	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli86	1272592	1272662	71	+	1272592	1272662	71	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli87	1301287	1301551	265	+	1301287	1301551	265	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli88	1320429	1320501	73	+	1320429	1320501	73	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli89	1399490	1399656	167	+	1399490	1399656	167	Srna	Mraheil et al. 2011	rli42, 	"Mraheil et al. 2011;Oliver et al. 2009;"				
rli9 - rliH	1180826	1181254	429	+	1180826	1181254	429	Srna	Mandin et al. 2007	rliH, 	"Toledo-Arana et al. 2009;Rfam 2012;Oliver et al. 2009;"				
rli90	1527941	1528048	108	-	1527941	1528048	108	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli91	1575830	1575917	88	-	1575830	1575917	88	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli92	1638942	1639091	150	+	1638942	1639091	150	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli93	1641179	1641239	61	+	1641179	1641239	61	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli94	2039079	2039375	297	-	2039079	2039375	297	Srna	Mraheil et al. 2011	RatA-2, 	"Wurtzel et al. 2012;Mraheil et al. 2011;Rfam 2012;"				
rli95	2106222	2106324	103	+	2106222	2106324	103	Srna	Mraheil et al. 2011		"Mraheil et al. 2011;"				
rli96	2239222	2239295	74	-	2239222	2239295	74	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli97	2279995	2280110	116	-	2279995	2280110	116	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli98	2361329	2361581	253	+	2361329	2361581	253	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
rli99	2395032	2395236	205	+	2395032	2395236	205	Srna	Mraheil et al. 2011		"Wurtzel et al. 2012;Mraheil et al. 2011;"				
yybP-ykoY	1021463	1021588	126	+	1021463	1021588	126	CisReg	Rfam		"Toledo-Arana et al. 2009;Mraheil et al. 2011;Rfam 2012;"