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Yo man, your tool here is nice - but I can no longer accept the discriminatory nature of your code against organisms with large chromosomes!
I mean really large chromosomes, larger than yours. Think about marsupials, for example. Plants, big genome plants. Or what would the Marbled lungfish say if you can't run somatypus on him? "Speciesism!"
Thank you for your interest in Somatypus. Unfortunately this tool is no longer maintained. I wish you best of luck in your future variant calling efforts.
Yo man, your tool here is nice - but I can no longer accept the discriminatory nature of your code against organisms with large chromosomes!
I mean really large chromosomes, larger than yours. Think about marsupials, for example. Plants, big genome plants. Or what would the Marbled lungfish say if you can't run somatypus on him? "Speciesism!"
CSI indexing on VCFs and BAM files is the future, I tell ya bro. Check out my brand new golden changes to your core bash script, here attached.
No questions. Peace out.
somatypus_1.3_big_chromosomes.zip
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