Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

¡Stop this chromosome discrimination! #4

Closed
ghost opened this issue Feb 24, 2020 · 1 comment
Closed

¡Stop this chromosome discrimination! #4

ghost opened this issue Feb 24, 2020 · 1 comment

Comments

@ghost
Copy link

ghost commented Feb 24, 2020

Yo man, your tool here is nice - but I can no longer accept the discriminatory nature of your code against organisms with large chromosomes!

I mean really large chromosomes, larger than yours. Think about marsupials, for example. Plants, big genome plants. Or what would the Marbled lungfish say if you can't run somatypus on him? "Speciesism!"

CSI indexing on VCFs and BAM files is the future, I tell ya bro. Check out my brand new golden changes to your core bash script, here attached.

No questions. Peace out.

somatypus_1.3_big_chromosomes.zip

@baezortega
Copy link
Owner

Thank you for your interest in Somatypus. Unfortunately this tool is no longer maintained. I wish you best of luck in your future variant calling efforts.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant