tools.yml

chunk: 0
tools:
- name: sra_tools
  owner: iuc
  revisions:
  - e08a7ad4378b
  tool_panel_section_label: Get Data
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: split_file_on_column
  owner: bgruening
  revisions:
  - 37a53100b67e
  tool_panel_section_label: Text Manipulation
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: fastq_filter
  owner: devteam
  revisions:
  - 81a9090d6df3
  tool_panel_section_label: FASTA/FASTQ
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: samtools_view
  owner: iuc
  revisions:
  - b72793637686
  tool_panel_section_label: SAM/BAM
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: samtools_split
  owner: devteam
  revisions:
  - 135c85f4cfaf
  tool_panel_section_label: SAM/BAM
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: sam_merge
  owner: devteam
  revisions:
  - 1977f1637890
  tool_panel_section_label: SAM/BAM
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: bcftools_concat
  owner: iuc
  revisions:
  - d40d4bf05718
  tool_panel_section_label: VCF/BCF
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: bcftools_annotate
  owner: iuc
  revisions:
  - 403553ae19f6
  tool_panel_section_label: VCF/BCF
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: vcffixup
  owner: devteam
  revisions:
  - 11f62f071125
  tool_panel_section_label: VCF/BCF
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: vcftools_annotate
  owner: devteam
  revisions:
  - 57a6550df582
  tool_panel_section_label: VCF/BCF
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: porechop
  owner: iuc
  revisions:
  - 93d623d9979c
  tool_panel_section_label: Nanopore
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: deeptools_compute_gc_bias
  owner: bgruening
  revisions:
  - 2bc10a9ca58b
  tool_panel_section_label: deepTools
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: bwa
  owner: devteam
  revisions:
  - 3fe632431b68
  tool_panel_section_label: Mapping
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: snpsift_dbnsfp
  owner: iuc
  revisions:
  - 4e21e4f2bc48
  tool_panel_section_label: Variant Calling
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: limma_voom
  owner: iuc
  revisions:
  - 0921444c832d
  tool_panel_section_label: RNA-seq
  tool_shed_url: toolshed.g2.bx.psu.edu
- name: mummer_delta_filter
  owner: iuc
  revisions:
  - b3acbb3a6af0
  tool_panel_section_label: Multiple Alignments
  tool_shed_url: toolshed.g2.bx.psu.edu