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CHANGELOG.md

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Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

Unreleased

v0.3.2 - 2024-08-15

Added

  • stdin and formatter_class flags to pyrodigal_gv.cli.main as introduced in latest Pyrodigal version.

Changed

  • Update pyrodigal dependency to v3.5.1.

v0.3.1 - 2023-11-27

Fixed

  • Inconsistent behaviour introduced by 868bd18ad121ad59489f76da031c0cebc29ff53a (apcamargo/genomad#56).

v0.3.0 - 2023-11-27

Added

  • Command line interface based off the pyrodigal CLI.

Fixed

  • Avoid storing all-zero motif weights in meta.json file.

Changed

  • Update pyrodigal dependency version to v3.2.1.

v0.2.0 - 2023-10-24

Added

  • min_mask argument to ViralGeneFinder to control the minimum lenght of masked regions on mask=True.
  • Explicit support for Python 3.12.

Changed

  • pyrodigal dependency version to v3.1.

v0.1.0 - 2023-09-17

Initial release.