cluster.json

{
    "__default__" :
    {
        "account" : "BIOL-CHONG-2019",
        "time" : "04:00:00",
        "threads" : 1,
        "partition" : "nodes",
        "mem" : "4g"
    },
    "bwa_index" :
    {
        "time" : "2-00:00:00",
        "threads" : 20,
        "mem" : "2g"
    },
    "bwa_mem" :
    {
        "time" : "2-00:00:00",
        "threads" : 6
    },
    "bwa_mem_pair" :
    {
        "time" : "2-00:00:00",
        "threads" : 6
    },
    "bin_feeder" :
    {
        "time" : "6-23:59:00",
        "partition" : "week"
    },
    "norm_counts" :
    {
        "time" : "01:00:00",
        "threads" : 8
    },
    "merge_filecounts" :
    {
        "time" : "01:00:00",
        "threads" : 8
    },
    "checkm_unbin" :
    {
        "time" : "08:00:00",
        "threads" : 20,
        "mem" : "2g"
    },
    "file_parser" :
    {
        "time" : "02:00:00",
        "threads" : 8
    },
    "kraken" :
    {
        "threads" : 20,
        "mem" : "4g"
    },
    "prokka" :
    {
        "threads" : 10,
        "mem" : "1g"
    },
    "checkm" :
    {
        "time" : "08:00:00",
        "threads" : 20
    }
}