Command line: /SPAdes-3.15.4-Linux/bin/spades.py	--metaviral	-1	/home/watersn/GitHub/vdblab-shotgun/.test/SRR18369973/SRR18369973_1.fastq.gz	-2	/home/watersn/GitHub/vdblab-shotgun/.test/SRR18369973/SRR18369973_2.fastq.gz	--assembly-graph	/home/watersn/GitHub/vdblab-shotgun/tmpassembly/spades_473.assembly_graph.gfa	--only-assembler	-o	/home/watersn/GitHub/vdblab-shotgun/tmpsp	

System information:
  SPAdes version: 3.15.4
  Python version: 3.8.10
  OS: Linux-3.10.0-957.12.2.el7.x86_64-x86_64-with-glibc2.29

Output dir: /home/watersn/GitHub/vdblab-shotgun/tmpsp
Mode: ONLY assembling (without read error correction)
Debug mode is turned OFF

Dataset parameters:
  Metagenomic mode
  Reads:
    Library number: 1, library type: paired-end
      orientation: fr
      left reads: ['/home/watersn/GitHub/vdblab-shotgun/.test/SRR18369973/SRR18369973_1.fastq.gz']
      right reads: ['/home/watersn/GitHub/vdblab-shotgun/.test/SRR18369973/SRR18369973_2.fastq.gz']
      interlaced reads: not specified
      single reads: not specified
      merged reads: not specified
    Library number: 2, library type: assembly-graph
      left reads: not specified
      right reads: not specified
      interlaced reads: not specified
      single reads: ['/home/watersn/GitHub/vdblab-shotgun/tmpassembly/spades_473.assembly_graph.gfa']
      merged reads: not specified
Assembly parameters:
  k: automatic selection based on read length
  Extrachromosomal mode is turned ON
  Repeat resolution is enabled
  Mismatch careful mode is turned OFF
  MismatchCorrector will be SKIPPED
  Coverage cutoff is turned OFF
Other parameters:
  Dir for temp files: /home/watersn/GitHub/vdblab-shotgun/tmpsp/tmp
  Threads: 16
  Memory limit (in Gb): 125