Failed to use CliWrap to run a docker command

[citystrawman]

Hi, I am trying to use CliWrap to run a docker command. Actually it is a docker wrapper named fmriprep-docker(it is based upon fmri-prep, and fmriprep-docker is a Python script that operates the Docker Engine seamlessly, see this ), when I execute it on powershell, it could run:

(the errors are because it requires some parameters, I do not use parameters for simplicity, but you can see it is able to run)
Then, I tried to implement it by CliWrap:

string workingDir = "C:\\Users\\PC\\AppData\\Roaming\\Python\\Python312\\Scripts";
string frmiprepDockerExe = Path.Combine(workingDir, "fmriprep-docker.exe");
var result = await Cli.Wrap(frmiprepDockerExe)
    .ExecuteBufferedAsync(cts.Token);

Howerver, when I run this code, it throws errors as follows:

I searched docker though the discussion panel and I found one says that it may be related to TTY, but I am not quite clear from that post. I appreciate if anyone could help me solve this issue. Thank you!

[Tyrrrz]

99% chance it's the same issue as here: #190

[citystrawman]

Does it work if you Cli.Wrap("pwsh").WithArguments(["-command", "fmriprep-docker"]) (or whatever is the right input to run your app via pwsh?

Currently I can run the code perfectly through this:

and I use CliWrap to simulate this:

var result = await Cli.Wrap(bashPath)
    .WithArguments(args => args
    .Add("-c")
    .Add(q))
    .ExecuteBufferedAsync(cts.Token);

where bashPath = "C:\Windows\System32\bash.exe"
and q is exactly the string from the above screenshot:

Then I got exceptions:

Then I tried another code:

var result = await Cli.Wrap(pwshPath)
    .WithArguments(args => args
    .Add("bash.exe")
    .Add("-c")
    .Add(q))
    .ExecuteBufferedAsync(cts.Token);

but here it returns result immediately and the result is successful. However , this command will actually execute about 50 minutes . I checked the output directory and it seems that it is producing the results, but I have to wait 50 minutes to check if it really doing OK.

BTW this discussion is too messy, some of my previous posts(for example, the "is not found" error) are due to my own fault. So may I close it and start another discussion?

[Tyrrrz]

The "input device is not a TTY" does seem like a standard input issue. It can happen when the underlying program does not check whether the standard input has been redirected before performing certain user interactions. With CliWrap all standard streams are always redirected, which is what makes the behavior different from running the command in a shell. If the underlying program (fmriprep in this case) doesn't provide a way to optionally disregard standard input (as it was possible with ripgrep in the linked issue), it might not be possible to properly wrap it. There is an open issue to support such scenarios (#225) but it's quite complex and hasn't been worked on.

BTW this discussion is too messy, some of my previous posts(for example, the "is not found" error) are due to my own fault. So may I close it and start another discussion?

Sure.

[citystrawman]

Hi Sir, I really appreciate your help and I want to sponsor you, however the only effective payment way that I can use is alipay. Is it possible for you to receive donation by alipay?

[Tyrrrz]

Thank you. Unfortunately I can't use Alipay :(

The only donation options I have are:

• GitHub Sponsors
• Patreon
• Buy Me a Coffee

If they don't work for you, don't worry about it :)

[citystrawman]

Thank you. Unfortunately I can't use Alipay :(

The only donation options I have are:

• GitHub Sponsors
• Patreon
• Buy Me a Coffee

If they don't work for you, don't worry about it :)

Oh sorry, I tried all 3 methods using my bank card but none of them work (I have no credit card but only bank card which support union pay). Wish someday you can support alipay or union pay!