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New_scans_plot_all.m
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New_scans_plot_all.m
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% New_scans_plot_all
% Produce the updated plots (16/6/17)
% Uses the results from Run_single_variable_scan.m to make the computational result
% Also uses the results from a composition scan
% This is generated by the function Deconvolute_composition_scan.m (which extends Process_composition_scan.m)
% N.b. electron density is manually hard coded in in Process_composition_scan.m (line 36)
% All subroutines and results are saved in OutputPlots
Computational_line_width = 2;
Experimental_line_width = 2;
Experimental_marker_size = 10;
Close_after_save = true;
MATLAB_colours = [ 0 0.4470 0.7410; ...
0.8500 0.3250 0.0980; ...
0.9290 0.6940 0.1250; ...
0.4940 0.1840 0.5560; ...
0.4660 0.6740 0.1880; ...
0.3010 0.7450 0.9330; ...
0.6350 0.0780 0.1840];
% FullWidthStyle = hgexport('readstyle','FullWidthFigure');
CW = hgexport('readstyle','ColumnWidth');
% Save for replicability
save('OutputPlots/Outputs/ExportStyles_updated','CW');
% Composition scans
FigureWidth_control = 'Column';
Comp_scan_langmuir
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_langmuir.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_langmuir.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_langmuir.fig')
close(langmuir_figure);
clear('langmuir_figure');
Comp_scan_plot_neutrals
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_neutrals.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_neutrals.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_neutrals.fig')
close(neutral_figure);
clear('neutral_figure');
Comp_scan_plot_ions
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_ions.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_ions.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_ions.fig')
close(ion_figure);
clear('ion_figure');
Comp_scan_plot_surface
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_surface.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_surface.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_surface.fig')
close(surface_figure);
clear('surface_figure');
Comp_scan_plot_fractions
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_fraction.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_fraction.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_fraction.fig')
close(fractions_figure);
clear('fractions_figure');
Comp_scan_plot_reactions_prod
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_reaction_prod.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_reaction_prod.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_reaction_prod.fig')
close(reaction_figure);
clear('reaction_figure');
Comp_scan_plot_reactions_loss
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_reaction_loss.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_reaction_loss.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_reaction_loss.fig')
close(reaction_figure);
clear('reaction_figure');
Comp_scan_plot_reactions_prod_fTe
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_reaction_prod_fTe.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_reaction_prod_fTe.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_reaction_prod_fTe.fig')
close(reaction_figure);
clear('reaction_figure');
Comp_scan_plot_reactions_loss_fTe
CW.Format = 'eps';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_reaction_loss_fTe.eps',CW);
CW.Format = 'png';
hgexport(gcf,'OutputPlots/Outputs/Composition_scan_reaction_loss_fTe.png',CW);
savefig(gcf,'OutputPlots/Outputs/Composition_scan_reaction_loss_fTe.fig')
close(reaction_figure);
clear('reaction_figure');
% % Power scans
% Power_scan_plot_neutrals
% CW.Format = 'eps';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_neutrals.eps',CW);
% CW.Format = 'png';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_neutrals.png',CW);
% savefig(gcf,'OutputPlots/Outputs/Power_scan_neutrals.fig')
% close(neutral_figure_p);
% clear('neutral_figure_p');
% Power_scan_plot_ions
% CW.Format = 'eps';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_ions.eps',CW);
% CW.Format = 'png';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_ions.png',CW);
% savefig(gcf,'OutputPlots/Outputs/Power_scan_ions.fig')
% close(ion_figure_p);
% clear('ion_figure_p');
% Power_scan_plot_surface
% CW.Format = 'eps';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_surface.eps',CW);
% CW.Format = 'png';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_surface.png',CW);
% savefig(gcf,'OutputPlots/Outputs/Power_scan_surface.fig')
% close(surface_figure_p);
% clear('surface_figure_p');
% Power_scan_plot_fractions
% CW.Format = 'eps';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_fraction.eps',CW);
% CW.Format = 'png';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_fraction.png',CW);
% savefig(gcf,'OutputPlots/Outputs/Power_scan_fraction.fig')
% close(fractions_figure_p);
% clear('fractions_figure_p');
% Power_scan_plot_reactions_prod
% CW.Format = 'eps';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_reaction_prod.eps',CW);
% CW.Format = 'png';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_reaction_prod.png',CW);
% savefig(gcf,'OutputPlots/Outputs/Power_scan_reaction_prod.fig')
% close(reaction_figure);
% clear('reaction_figure');
% Power_scan_plot_reactions_loss
% CW.Format = 'eps';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_reaction_loss.eps',CW);
% CW.Format = 'png';
% hgexport(gcf,'OutputPlots/Outputs/Power_scan_reaction_loss.png',CW);
% savefig(gcf,'OutputPlots/Outputs/Power_scan_reaction_loss.fig')
% close(reaction_figure);
% clear('reaction_figure');
close hidden
clear('Controller')
disp('Done')
% clear('Close_after_save', 'CW', 'Computational_line_width', 'Experimental_line_width', 'Experimental_marker_size', 'FigureWidth_control', 'FullWidthStyle', 'MATLAB_colours')