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FastQC hangs forever on Travis CI #701

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maxulysse opened this issue Dec 13, 2018 · 1 comment
Closed

FastQC hangs forever on Travis CI #701

maxulysse opened this issue Dec 13, 2018 · 1 comment

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@maxulysse
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Describe the bug

  • FastQC hangs forever on Travis CI (or at least more than 10 min)

To Reproduce

  • Relaunch any Travis CI jobs that is currently failing

Expected behavior

  • FastQC should finish in just a couple of minutes (or even less)

System (please complete the following information):

  • Hardware: TravisCI
  • Executor: local
  • OS: TravisCI
  • Version TravisCI

Nextflow (please complete the following information):

  • Version: 0.32.0

Container engine (please complete the following information):

  • Engine: Docker
  • version: TravisCI

Container (please complete the following information):

  • tag: latest

Sarek (please complete the following information):

  • version: dev

Additional context

[30/4e318f] Submitted process > RunFastQC (1234-1234N_M1)
No output has been received in the last 10m0s, this potentially indicates a stalled build or something wrong with the build itself.
Check the details on how to adjust your build configuration on: https://docs.travis-ci.com/user/common-build-problems/#Build-times-out-because-no-output-was-received
The build has been terminated
@apeltzer
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Here you go: bioconda/bioconda-recipes#12616

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