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Error in get_lp_data(maf = m1, geneID = gene, AACol = AACol1, refSeqID = refSeqID, : Structure for protein BAGE3 not found. #1033

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libiqing77 opened this issue Jun 19, 2024 · 3 comments
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@libiqing77
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Hi guys,

when I used lollipopPlot2 to plot figure for BAGE3 gene, I got the following error.
Gene: BAGE3
Error in get_lp_data(maf = m1, geneID = gene, AACol = AACol1, refSeqID = refSeqID, :
Structure for protein BAGE3 not found.

Could you help update the database.
Thanks.

@libiqing77 libiqing77 changed the title Structure for protein BAGE3 not found Error in get_lp_data(maf = m1, geneID = gene, AACol = AACol1, refSeqID = refSeqID, : Structure for protein BAGE3 not found. Jun 19, 2024
@PoisonAlien
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Hi,

Thanks for the issue. Unfortunately, this gene seems to have no transcripts or protein structures available. Unirot says its a 109 aa length protein with no domains.
Please confirm or point me to the structure example (from any publication), I am happy to include it.

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This issue is stale because it has been open for 60 days with no activity.

@github-actions github-actions bot added the stale label Aug 19, 2024
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github-actions bot commented Sep 2, 2024

This issue was closed because it has been inactive for 14 days since being marked as stale.

@github-actions github-actions bot closed this as completed Sep 2, 2024
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