.gitignore

.DS_Store

_cache
_site
generation_report.html

# data (remove everything by default)
*.tar.gz
*.bz2
*.csv
*.zip
*xlsx
*txt
*.DS_Store
*.jpg
._images
*.dat
*.png
*.ply
*.prg
*.opf
*.html

1-code_old/
12-simulations/
11-outputs/

# Data to keep:
!00-data/picarro_flux/data_mean_flux.csv
!00-data/picarro_flux/outliers.csv
!02-time-synchronization/match_scale_camera_time.csv
!00-data/door_opening/Mic3_door_opening.csv
!00-data/climate/climate.zip
!00-data/scale_weight/weights.tar.bz2
!00-data/scenario_sequence/SequencePlanteMicro3.csv
!00-data/scenario_sequence/SequenceScenarioMicro3.csv
!00-data/thermal_camera_roi_coordinates/coordinates.tar.bz2
!00-data/walz/walz.tar.bz2
!00-data/spad/SPAD_all_plants.csv
!00-data/spad/SPAD.csv
!00-data/morphology_and_biomass/leaves_weight.csv
!00-data/morphology_and_biomass/bulbs_weight.csv
!00-data/morphology_and_biomass/roots_weight.csv
!00-data/lidar/reconstructions.tar.bz2

!01-climate/climate_mic3_5min.csv
!01-climate/climate_mic3_10min.csv
!02-time-synchronization/time_synchronization.csv
!03-CO2/CO2_fluxes.csv
!04-thermal_camera_measurements/leaf_temperature.csv.bz2
!05-transpiration/transpiration_first_5min.csv.bz2
!05-transpiration/transpiration_10min.csv.bz2
!05-transpiration/plant_sequence_delayed_corrected.csv
!06-walz/photosynthetic_and_stomatal_parameters.csv
!07-spad/SPAD_models.csv
!09-database/database_5min.csv.bz2
!09-database/database_10min.csv.bz2
!09-database/columns.csv
!09-database/plant_surface.csv
!08-reconstruction/translations.csv
!08-reconstruction/reconstructions.tar.bz2
!11-outputs/Reconstructions_LiDAR_all.png
!website/content/assets/github_clone.png
!website/content/assets/github_download.png
.Rproj.user
04-thermal_camera_measurements/1-compute_leaf_temperature backup 2.jl
05-transpiration/transpiration_10min.csv.bz2
paper/.Rhistory
.Rhistory
paper/2-figuresTables/LightSpectrum.pdf