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<!DOCTYPE html>
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<title>Interactive Visualization and Plotting with Julia</title>
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<body>
<div class="container-fluid">
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<a href="index_content.html" target="main-iframe"
class="d-flex pb-3 mb-3 link-dark text-decoration-none border-bottom">
<span class="fs-1 fw-semibold">Interactive Visualization and Plotting with Julia</span>
</a>
<ul class="list-unstyled ps-0">
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter01"
aria-expanded="false">
Chapter 01 — An Introduction to Julia for Data
Visualization and Analysis
</button>
<div class="collapse" id="chapter01">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter01/FirstNotebook.html" target="main-iframe"
class="link-dark rounded">Taking advantage of Jupyter notebooks through
IJulia</a></li>
<li><a href="Chapter01/JuliaTypes.jl.html" target="main-iframe"
class="link-dark rounded">Knowing the basic Julia types for
data visualization</a></li>
<li><a href="Chapter01/BasicPlots.jl.html" target="main-iframe"
class="link-dark rounded">Creating a basic
plot</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter02"
aria-expanded="false">
Chapter 02 — The Julia Plotting Ecosystem
</button>
<div class="collapse" id="chapter02">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter02/PlottingLibraries.html" target="main-iframe"
class="link-dark rounded">Plotting libraries</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter03"
aria-expanded="false">
Chapter 03 — Getting Interactive Plots with Julia
</button>
<div class="collapse" id="chapter03">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter03/Observables_arc.html" target="main-iframe"
class="link-dark rounded">Triggering actions using Observables</a></li>
<li><a href="Chapter03/Pluto_arc.jl.html" target="main-iframe"
class="link-dark rounded">Creating interactive visualizations with Pluto</a>
</li>
<li><a href="Chapter03/PlutoUI_arc.jl.html" target="main-iframe"
class="link-dark rounded">Creating interfaces with PlutoUI</a>
</li>
<li><a href="Chapter03/Pluto_WGLMakie_arc.jl.html" target="main-iframe"
class="link-dark rounded">Interactive plotting with WGLMakie and Pluto</a>
</li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter04"
aria-expanded="false">
Chapter 04 — An Introduction to Julia for Data
Visualization and Analysis
</button>
<div class="collapse" id="chapter04">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter04/Plots_animation_verbose.html" target="main-iframe"
class="link-dark rounded">Easy animation
using Plots (verbose)</a></li>
<li><a href="Chapter04/Plots_animation.jl.html" target="main-iframe"
class="link-dark rounded">Easy animation
using Plots</a></li>
<li><a href="Chapter04/Plots_and_Animations.jl.html" target="main-iframe"
class="link-dark rounded">Using the
Animations package</a></li>
<li><a href="Chapter04/Makie_animation.jl.html" target="main-iframe"
class="link-dark rounded">Animating Makie
plots</a></li>
<li><a href="Chapter04/Javis_animation.jl.html" target="main-iframe"
class="link-dark rounded">Getting started with Javis</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter05"
aria-expanded="false">
Chapter 05 — Introducing the Grammar of Graphics
</button>
<div class="collapse" id="chapter05">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter05/describe_iris_dataframe.jl.html" target="main-iframe"
class="link-dark rounded">Working with DataFrames and tidy data</a></li>
<li><a href="Chapter05/gadfly/gadfly.jl.html" target="main-iframe"
class="link-dark rounded">Exploring data with Gadfly</a></li>
<li><a href="Chapter05/vegalite/vegalite.jl.html" target="main-iframe"
class="link-dark rounded">Introducing the Grammar of Interactive Graphics
with VegaLite</a></li>
<li><a href="Chapter05/aog.jl.html" target="main-iframe"
class="link-dark rounded">Makie's Algebra of Graphics</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter06"
aria-expanded="false">
Chapter 06 — Creating Statistical Plots
</button>
<div class="collapse" id="chapter06">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter06/anscombe.jl.html" target="main-iframe"
class="link-dark rounded"><em>Anscombe’s
quartet</em></a></li>
<li><a href="Chapter06/statsplots.jl.html" target="main-iframe"
class="link-dark rounded">Introducing
StatsPlots</a></li>
<li><a href="Chapter06/histogram_statsplots.jl.html" target="main-iframe"
class="link-dark rounded">Drawing histograms
(StatsPlots)</a></li>
<li><a href="Chapter06/histogram_gadfly.jl.html" target="main-iframe"
class="link-dark rounded">Drawing histograms
(Gadfly)</a></li>
<li><a href="Chapter06/histogram_makie.jl.html" target="main-iframe"
class="link-dark rounded">Drawing histograms
(Makie)</a></li>
<li><a href="Chapter06/density_statsplots.jl.html" target="main-iframe"
class="link-dark rounded">Approximating density functions
(StatsPlots)</a></li>
<li><a href="Chapter06/density_gadfly.jl.html" target="main-iframe"
class="link-dark rounded">Approximating density functions
(Gadfly)</a></li>
<li><a href="Chapter06/density_makie.jl.html" target="main-iframe"
class="link-dark rounded">Approximating density functions
(Makie)</a></li>
<li><a href="Chapter06/boxplot_statsplots.jl.html" target="main-iframe"
class="link-dark rounded">Introducing boxplots
(StatsPlots)</a></li>
<li><a href="Chapter06/boxplot_gadfly.jl.html" target="main-iframe"
class="link-dark rounded">Introducing boxplots
(Gadfly)</a></li>
<li><a href="Chapter06/boxplot_makie.jl.html" target="main-iframe"
class="link-dark rounded">Introducing boxplots
(Makie)</a></li>
<li><a href="Chapter06/violin_statsplots.jl.html" target="main-iframe"
class="link-dark rounded">Visualizing distribution shapes with violin plots
(StatsPlots)</a></li>
<li><a href="Chapter06/violin_gadfly.jl.html" target="main-iframe"
class="link-dark rounded">Visualizing distribution shapes with violin plots
(Gadfly)</a></li>
<li><a href="Chapter06/violin_makie.jl.html" target="main-iframe"
class="link-dark rounded">Visualizing distribution shapes with violin plots
(Makie)</a></li>
<li><a href="Chapter06/qqplot_statsplots.jl.html" target="main-iframe"
class="link-dark rounded">Comparing distributions with Q-Q plots
(StatsPlots)</a></li>
<li><a href="Chapter06/qqplot_gadfly.jl.html" target="main-iframe"
class="link-dark rounded">Comparing distributions with Q-Q plots
(Gadfly)</a></li>
<li><a href="Chapter06/qqplot_makie.jl.html" target="main-iframe"
class="link-dark rounded">Comparing distributions with Q-Q plots
(Makie)</a></li>
<li><a href="Chapter06/bidimensional_statsplots.jl.html" target="main-iframe"
class="link-dark rounded">Plotting bivariate
distributions and regressions</a></li>
<li><a href="Chapter06/regression_gadfly.jl.html" target="main-iframe"
class="link-dark rounded">Drawing regression lines
(Gadfly)</a></li>
<li><a href="Chapter06/regression_makie.jl.html" target="main-iframe"
class="link-dark rounded">Drawing regression lines
(Makie)</a></li>
<li><a href="Chapter06/marginal_plots.jl.html" target="main-iframe"
class="link-dark rounded">Creating marginal
plots</a></li>
<li><a href="Chapter06/clustering.jl.html" target="main-iframe"
class="link-dark rounded">Visualizing clustering results</a></li>
<li><a href="Chapter06/groups.jl.html" target="main-iframe"
class="link-dark rounded">Comparing between
groups</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter07"
aria-expanded="false">
Chapter 07 — Visualizing Graphs
</button>
<div class="collapse" id="chapter07">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter07/graphs_basics.jl.html" target="main-iframe"
class="link-dark rounded">Working with graphs in Julia</a></li>
<li><a href="Chapter07/directed_graph_basics.jl.html" target="main-iframe"
class="link-dark rounded">Working with
graphs in Julia (directed graphs)</a></li>
<li><a href="Chapter07/metagraphs.jl.html" target="main-iframe"
class="link-dark rounded">Working with MetaGraph</a></li>
<li><a href="Chapter07/save_load_graphs.jl.html" target="main-iframe"
class="link-dark rounded">Saving and loading
graphs</a></li>
<li><a href="Chapter07/graphplot.jl.html" target="main-iframe"
class="link-dark rounded">Visualizing graphs
with GraphPlot</a></li>
<li><a href="Chapter07/graphrecipes.jl.html" target="main-iframe"
class="link-dark rounded">Exploring
GraphRecipes</a></li>
<li><a href="Chapter07/graphmakie.jl.html" target="main-iframe"
class="link-dark rounded">Creating interactive graphs with GraphMakie</a>
</li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter08"
aria-expanded="false">
Chapter 08 — Visualizing Geographically Distributed Data
</button>
<div class="collapse" id="chapter08">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter08/choropleth_map_plots.jl.html" target="main-iframe"
class="link-dark rounded">Creating a choropleth map with Plots</a></li>
<li><a href="Chapter08/choropleth_map_geomakie.jl.html" target="main-iframe"
class="link-dark rounded">Creating a choropleth map with GeoMakie</a></li>
<li><a href="Chapter08/openstreetmap.jl.html" target="main-iframe"
class="link-dark rounded">Introducing OpenStreetMapX</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter09"
aria-expanded="false">
Chapter 09 — Plotting Biological Data
</button>
<div class="collapse" id="chapter09">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter09/phylo.jl.html" target="main-iframe"
class="link-dark rounded">Visualizing phylogenetic trees</a></li>
<li><a href="Chapter09/msa.jl.html" target="main-iframe"
class="link-dark rounded">Exploring multiple sequence alignments</a></li>
<li><a href="Chapter09/structure.jl.html" target="main-iframe"
class="link-dark rounded">Visualizing protein structures</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter10"
aria-expanded="false">
Chapter 10 — The Anatomy of a Plot
</button>
<div class="collapse" id="chapter10">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter10/plots.jl.html" target="main-iframe"
class="link-dark rounded">The anatomy of a Plots plot</a></li>
<li><a href="Chapter10/makie.jl.html" target="main-iframe"
class="link-dark rounded">Knowing the components of Makie’s figures</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter11"
aria-expanded="false">
Chapter 11 — Defining Plot Layouts to Create Figure Panels
</button>
<div class="collapse" id="chapter11">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter11/plots.jl.html" target="main-iframe"
class="link-dark rounded">Creating layouts with Plots</a></li>
<li><a href="Chapter11/makie.jl.html" target="main-iframe"
class="link-dark rounded">Understanding Makie’s layout system</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter12"
aria-expanded="false">
Chapter 12 — Customizing Plot Attributes – Axes, Legends, and Colors
</button>
<div class="collapse" id="chapter12">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter12/plots_attributes.jl.html" target="main-iframe"
class="link-dark rounded">Exploring plot
attributes</a></li>
<li><a href="Chapter12/latex_plots.jl.html" target="main-iframe"
class="link-dark rounded">Using LaTeX equations</a></li>
<li><a href="Chapter12/plots_legends.jl.html" target="main-iframe"
class="link-dark rounded">Tailoring
legends</a></li>
<li><a href="Chapter12/plots_colorschemes.jl.html" target="main-iframe"
class="link-dark rounded">Coloring our figures</a></li>
<li><a href="Chapter12/plots_color_attributes.jl.html" target="main-iframe"
class="link-dark rounded">Color attributes</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter13"
aria-expanded="false">
Chapter 13 — Designing Plot Themes
</button>
<div class="collapse" id="chapter13">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter13/plots_themes.jl.html" target="main-iframe"
class="link-dark rounded">Using and defining themes with Plots</a></li>
<li><a href="Chapter13/makie_themes.jl.html" target="main-iframe"
class="link-dark rounded">Theming with Makie</a></li>
</ul>
</div>
</li>
<li class="mb-1">
<button class="btn btn-toggle align-items-center
rounded collapsed" data-bs-toggle="collapse" data-bs-target="#chapter14"
aria-expanded="false">
Chapter 14 — Designing Your Own Plots – Plot Recipes
</button>
<div class="collapse" id="chapter14">
<ul class="btn-toggle-nav list-unstyled
fw-normal pb-1 small">
<li><a href="Chapter14/plots_shapes.jl.html" target="main-iframe"
class="link-dark rounded">Drawing shapes</a></li>
<li><a href="Chapter14/plots_custom_markers.jl.html" target="main-iframe"
class="link-dark rounded">Drawing shapes (custom marker shapes)</a></li>
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