From 99744cdce59171f87e8dd6cbf5512b8fbdd2d366 Mon Sep 17 00:00:00 2001 From: Tim Sears Date: Mon, 16 Mar 2020 13:26:35 -0700 Subject: [PATCH] bioconductor packages: 3.8 -> 3.10 --- .../development/libraries/bwidget/default.nix | 3 +- .../r-modules/bioc-annotation-packages.nix | 358 +- .../r-modules/bioc-experiment-packages.nix | 744 +-- pkgs/development/r-modules/bioc-packages.nix | 3446 ++++++------- .../r-modules/bioc-workflows-packages.nix | 36 + pkgs/development/r-modules/cran-packages.nix | 4302 +++++++++-------- pkgs/development/r-modules/default.nix | 323 +- .../r-modules/generate-r-packages.R | 11 +- .../r-modules/patches/EMCluster.patch | 6 - .../r-modules/patches/RAppArmor.patch | 20 - .../r-modules/patches/Rhdf5lib.patch | 15 +- .../r-modules/test-package-build.nix | 508 ++ 12 files changed, 5263 insertions(+), 4509 deletions(-) create mode 100644 pkgs/development/r-modules/bioc-workflows-packages.nix delete mode 100644 pkgs/development/r-modules/patches/EMCluster.patch delete mode 100644 pkgs/development/r-modules/patches/RAppArmor.patch create mode 100644 pkgs/development/r-modules/test-package-build.nix diff --git a/pkgs/development/libraries/bwidget/default.nix b/pkgs/development/libraries/bwidget/default.nix index 0279dc8f5efae..448f702903ad4 100644 --- a/pkgs/development/libraries/bwidget/default.nix +++ b/pkgs/development/libraries/bwidget/default.nix @@ -6,7 +6,8 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://sourceforge/tcllib/bwidget-${version}.tar.gz"; - sha256 = "0knlnpmwam74v0qa1h9gg4f32vzzz7ays2wbslflf51ilg7nw6jk"; + #sha256 = "0knlnpmwam74v0qa1h9gg4f32vzzz7ays2wbslflf51ilg7nw6jk"; + sha256 = "0wm6hk3rnqhnn2cyw24drqwbfnysp6jyfi8lc1vih5k704a955lf"; }; dontBuild = true; diff --git a/pkgs/development/r-modules/bioc-annotation-packages.nix b/pkgs/development/r-modules/bioc-annotation-packages.nix index 863d7c9fcfe04..62acd746f801d 100644 --- a/pkgs/development/r-modules/bioc-annotation-packages.nix +++ b/pkgs/development/r-modules/bioc-annotation-packages.nix @@ -4,10 +4,10 @@ # Rscript generate-r-packages.R bioc-annotation >new && mv new bioc-annotation-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.8"; }; +let derive2 = derive { biocVersion = "3.10"; }; in with self; { AHCytoBands = derive2 { name="AHCytoBands"; version="0.99.0"; sha256="0g92nz33rx14zl5can7s701bipdgz7rxqygvvc22c4a0qj52ijnq"; depends=[]; }; - AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.8"; sha256="1v1177l4y0l546mzp8ybhvhnjwrsck5bkic8w6n6n2xq07d6aahz"; depends=[AnnotationHubData ensembldb]; }; + AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.13"; sha256="0nfjhzji6v5kvg5qafffr5xbd9qc8gyyzc91c0hkgvrvw3784q4y"; depends=[AnnotationHubData ensembldb]; }; BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.0"; sha256="06549kkzy36n378zb61lrf9zardncp7i20r73rmmiq1pnfjp3gww"; depends=[BSgenome]; }; BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; }; BSgenome_Amellifera_UCSC_apiMel2 = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2"; version="1.4.0"; sha256="1967w7aly7qydykk7rar712kvgsav3zjr4kirybkj17nwiynd74g"; depends=[BSgenome]; }; @@ -22,6 +22,7 @@ in with self; { BSgenome_Btaurus_UCSC_bosTau6 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6"; version="1.4.0"; sha256="0waaf9wfmdl5jbi3la64vsiqb83lyw9fqg3sn90bf1q7k3k617p3"; depends=[BSgenome]; }; BSgenome_Btaurus_UCSC_bosTau6_masked = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6.masked"; version="1.3.99"; sha256="07isv0lcvlsl0aha1p474l0pps0j7bsh455m33vfxwahivqsfy27"; depends=[BSgenome BSgenome_Btaurus_UCSC_bosTau6]; }; BSgenome_Btaurus_UCSC_bosTau8 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau8"; version="1.4.2"; sha256="16wjy1aw9nvx03r7w8yh5w7sw3pn8i9nczd0n0728l6nnyqxlsz6"; depends=[BSgenome]; }; + BSgenome_Btaurus_UCSC_bosTau9 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau9"; version="1.4.3"; sha256="108s504l8bcifi544wnvfn2x0za367k04dx8xhc4rjkdmwdj1yfj"; depends=[BSgenome]; }; BSgenome_Carietinum_NCBI_v1 = derive2 { name="BSgenome.Carietinum.NCBI.v1"; version="1.0.0"; sha256="1asyyb1p1bzc7dv9s2igjxrf9f144vvz2xbv9qxg15w9qzzx7r33"; depends=[BSgenome]; }; BSgenome_Celegans_UCSC_ce10 = derive2 { name="BSgenome.Celegans.UCSC.ce10"; version="1.4.0"; sha256="1zaym97jk4npxk14ifvwz2rvhm4zx9xgs33r9vvx9rlynp0gydrk"; depends=[BSgenome]; }; BSgenome_Celegans_UCSC_ce11 = derive2 { name="BSgenome.Celegans.UCSC.ce11"; version="1.4.2"; sha256="0d4bxfglpqiv1f0n6imdgz101g9383hfj3ra91268wryzlm0yk5w"; depends=[BSgenome]; }; @@ -31,12 +32,14 @@ in with self; { BSgenome_Cfamiliaris_UCSC_canFam2_masked = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam2.masked"; version="1.3.99"; sha256="14108j73z7959d070xiqar5s14pac18cs8a22lcggbmp5x93hmqz"; depends=[BSgenome BSgenome_Cfamiliaris_UCSC_canFam2]; }; BSgenome_Cfamiliaris_UCSC_canFam3 = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam3"; version="1.4.0"; sha256="1ir092yh1h03ag1lnj2rh5hjp2mqrw7fcyb6mqyjm0h8g1pmpicr"; depends=[BSgenome]; }; BSgenome_Cfamiliaris_UCSC_canFam3_masked = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam3.masked"; version="1.3.99"; sha256="07y28g6b4sbp38yg5rwldda7s1cwcpil6rzsb4csskvs0xi5286l"; depends=[BSgenome BSgenome_Cfamiliaris_UCSC_canFam3]; }; + BSgenome_Cjacchus_UCSC_calJac3 = derive2 { name="BSgenome.Cjacchus.UCSC.calJac3"; version="1.4.2"; sha256="1s1srg6lr3dndbpv83bqlxz5lhyhxh431yrd919yl4fwmr5rvx0z"; depends=[BSgenome]; }; BSgenome_Dmelanogaster_UCSC_dm2 = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm2"; version="1.4.0"; sha256="1vnqbm1123zmpn1iwyygr1p4js0j6vifyz7iwzgkiw543yb1mwnl"; depends=[BSgenome]; }; BSgenome_Dmelanogaster_UCSC_dm2_masked = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm2.masked"; version="1.3.99"; sha256="1qclf62c3qrdhnrb6p4rhj7wrarlsbm716d37k0gbdzkfm2vhyr7"; depends=[BSgenome BSgenome_Dmelanogaster_UCSC_dm2]; }; BSgenome_Dmelanogaster_UCSC_dm3 = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm3"; version="1.4.0"; sha256="19bm3lkhhkag3gnwp419211fh0cnr0x6fa0r1lr0ycwrikxdxsv8"; depends=[BSgenome]; }; BSgenome_Dmelanogaster_UCSC_dm3_masked = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm3.masked"; version="1.3.99"; sha256="1756csb09f1br9rj1l3f08qyh4hlymdbd0cfn8x3fq39dn45m5ap"; depends=[BSgenome BSgenome_Dmelanogaster_UCSC_dm3]; }; BSgenome_Dmelanogaster_UCSC_dm6 = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm6"; version="1.4.1"; sha256="1bhj0rdgf7lspw4xby9y9mf7v7jxxz8001bc8vw8kf04rjsx6060"; depends=[BSgenome]; }; BSgenome_Drerio_UCSC_danRer10 = derive2 { name="BSgenome.Drerio.UCSC.danRer10"; version="1.4.2"; sha256="1grlxihdx65fwgb9gbp1jibbqan9a5667w4jgswhg0qsia608lzs"; depends=[BSgenome]; }; + BSgenome_Drerio_UCSC_danRer11 = derive2 { name="BSgenome.Drerio.UCSC.danRer11"; version="1.4.3"; sha256="0gam2ffjqins14z8asyxg2zhwqasp3gklrwl7n73x9d3x5i46896"; depends=[BSgenome]; }; BSgenome_Drerio_UCSC_danRer5 = derive2 { name="BSgenome.Drerio.UCSC.danRer5"; version="1.4.0"; sha256="1mxmy4ika192xvlrsynyvnb7kvcvbsl89g39q53vrkibhml1q0v5"; depends=[BSgenome]; }; BSgenome_Drerio_UCSC_danRer5_masked = derive2 { name="BSgenome.Drerio.UCSC.danRer5.masked"; version="1.3.99"; sha256="03y08jlknb52x37wg95xaf62n5fbsfpmx57bjyxz2gj0n8zhcdgv"; depends=[BSgenome BSgenome_Drerio_UCSC_danRer5]; }; BSgenome_Drerio_UCSC_danRer6 = derive2 { name="BSgenome.Drerio.UCSC.danRer6"; version="1.4.0"; sha256="0h2chcpdi2vy29fg43r6q37vvb7p4d4cpnszlsmiy7ax358sd5ji"; depends=[BSgenome]; }; @@ -51,6 +54,7 @@ in with self; { BSgenome_Ggallus_UCSC_galGal4 = derive2 { name="BSgenome.Ggallus.UCSC.galGal4"; version="1.4.0"; sha256="1qfl046akdf43azigprc13sssgbmxdz9dmlrvy13ag8fgfkjxign"; depends=[BSgenome]; }; BSgenome_Ggallus_UCSC_galGal4_masked = derive2 { name="BSgenome.Ggallus.UCSC.galGal4.masked"; version="1.3.99"; sha256="0fvqimjf1xvgka4nw66nd0rbyb7r93v8cyw33776lhfv68ny058v"; depends=[BSgenome BSgenome_Ggallus_UCSC_galGal4]; }; BSgenome_Ggallus_UCSC_galGal5 = derive2 { name="BSgenome.Ggallus.UCSC.galGal5"; version="1.4.2"; sha256="0gi82xr2b3fn3wi608nmqp3cgjx63rm82wy24p9l0s1qqh2z3jdb"; depends=[BSgenome]; }; + BSgenome_Ggallus_UCSC_galGal6 = derive2 { name="BSgenome.Ggallus.UCSC.galGal6"; version="1.4.3"; sha256="13da9fprwhi0aknrl41s7j48b2ipj8r6n110k3rywswmbwz090n5"; depends=[BSgenome]; }; BSgenome_Hsapiens_1000genomes_hs37d5 = derive2 { name="BSgenome.Hsapiens.1000genomes.hs37d5"; version="0.99.1"; sha256="1cg0g5fqmsvwyw2p9hp2yy4ilk21jkbbrnpgqvb5c36ihjwvc7sr"; depends=[BSgenome]; }; BSgenome_Hsapiens_NCBI_GRCh38 = derive2 { name="BSgenome.Hsapiens.NCBI.GRCh38"; version="1.3.1000"; sha256="0y75qdq578fh6420vbvsbwmdw8jvr3g06qli2h3vj3pxmjykh9c1"; depends=[BSgenome]; }; BSgenome_Hsapiens_UCSC_hg17 = derive2 { name="BSgenome.Hsapiens.UCSC.hg17"; version="1.3.1000"; sha256="1q8p0zp5xpp22znwnygl3jhc159db4q3kkpj5wfij5a6z19zs1w3"; depends=[BSgenome]; }; @@ -61,8 +65,10 @@ in with self; { BSgenome_Hsapiens_UCSC_hg19_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg19.masked"; version="1.3.99"; sha256="0452pyah0kv1vsrsjbrqw4k2rm8lc2vc771dzib45gnnfz86qxrr"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg19]; }; BSgenome_Hsapiens_UCSC_hg38 = derive2 { name="BSgenome.Hsapiens.UCSC.hg38"; version="1.4.1"; sha256="1ql08pvi4vv0ynvg4qs9kysw1c7s3crkgin6zxvgzqk6fray9mvi"; depends=[BSgenome]; }; BSgenome_Hsapiens_UCSC_hg38_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg38.masked"; version="1.3.99"; sha256="0plfrhkwgpgp22mj5n704k4ml0vl6hs5wb5vzqnw3vr8qwv0bli1"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg38]; }; + BSgenome_Mdomestica_UCSC_monDom5 = derive2 { name="BSgenome.Mdomestica.UCSC.monDom5"; version="1.4.2"; sha256="16kzb66kjpmf9j92pwh98ah5rhrnfyzdpr0rk659zham6dzga9ck"; depends=[BSgenome]; }; BSgenome_Mfascicularis_NCBI_5_0 = derive2 { name="BSgenome.Mfascicularis.NCBI.5.0"; version="1.4.2"; sha256="1lrdj7aibx4i60hpbaqgk3qir9zjs67mxdgp5jmgmw7gf2nwyn3x"; depends=[BSgenome]; }; BSgenome_Mfuro_UCSC_musFur1 = derive2 { name="BSgenome.Mfuro.UCSC.musFur1"; version="1.4.1"; sha256="0c0569a1k36sk0vzf7afhnfm0n2nwcdp3dc88s1hghpg7lwi9g9j"; depends=[BSgenome]; }; + BSgenome_Mmulatta_UCSC_rheMac10 = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac10"; version="1.4.3"; sha256="0y5khxwf8wzvfwpdv1dvd799v820jxxyhrryi79la66gm7dsd9s4"; depends=[BSgenome]; }; BSgenome_Mmulatta_UCSC_rheMac2 = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac2"; version="1.4.0"; sha256="15vswd1fq7a7g1dkm0wzkmclih8z373nfzjyc3zrn9l0nawdv9jj"; depends=[BSgenome]; }; BSgenome_Mmulatta_UCSC_rheMac2_masked = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac2.masked"; version="1.3.99"; sha256="1j4z4iy13n4qbi9a50qw1hn8z14xz0z8hbiwhy2bb9znykkf4chd"; depends=[BSgenome BSgenome_Mmulatta_UCSC_rheMac2]; }; BSgenome_Mmulatta_UCSC_rheMac3 = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac3"; version="1.4.0"; sha256="0r3v4p567rxcczwqi7zdz7pmdiffgrq83j488libdb4s0hdg5jmi"; depends=[BSgenome]; }; @@ -99,8 +105,9 @@ in with self; { BSgenome_Vvinifera_URGI_IGGP12Xv0 = derive2 { name="BSgenome.Vvinifera.URGI.IGGP12Xv0"; version="0.1"; sha256="1m8mqkiqs7291hccb8pfyf2yxpky45qr6j3d9wkvp9x3ra3h0yxf"; depends=[BSgenome]; }; BSgenome_Vvinifera_URGI_IGGP12Xv2 = derive2 { name="BSgenome.Vvinifera.URGI.IGGP12Xv2"; version="0.1"; sha256="1saavsi75gw33jphhm3qb5psyfrv850ss4cmqr4i7aw1kc0fvs1j"; depends=[BSgenome]; }; BSgenome_Vvinifera_URGI_IGGP8X = derive2 { name="BSgenome.Vvinifera.URGI.IGGP8X"; version="0.1"; sha256="0v0hi2pbbi5ynd92bvbv4bzr7bgv48kvyz62hdv7k9gh7s5pg0id"; depends=[BSgenome]; }; - ChemmineDrugs = derive2 { name="ChemmineDrugs"; version="1.0.0"; sha256="0h4jxcb6vkf9ijljas7yvcx6vmrd5rpjgj202cf2jb9hx8h9497i"; depends=[BiocGenerics ChemmineR RSQLite]; }; + ChemmineDrugs = derive2 { name="ChemmineDrugs"; version="1.0.2"; sha256="0l47ac6lkycmghra2cbcdcxcv47ari8xg6lxpzilvkf4n6ld6064"; depends=[BiocGenerics ChemmineR RSQLite]; }; DO_db = derive2 { name="DO.db"; version="2.9"; sha256="10bqqa124l61ivzy4mdd3z3ar9a6537qbxw23pc4y9w8a6dwnavn"; depends=[AnnotationDbi]; }; + ENCODExplorerData = derive2 { name="ENCODExplorerData"; version="0.99.4"; sha256="05fyb1ya21hip7bsb4h99ghbk5i7m58998n151p17kl6vrjhcksw"; depends=[data_table jsonlite RCurl tidyr]; }; EnsDb_Hsapiens_v75 = derive2 { name="EnsDb.Hsapiens.v75"; version="2.99.0"; sha256="0jx6rf6v0j8yr07q3c1h7s121901dc400nm6xaiv4i7kb5czjn9c"; depends=[ensembldb]; }; EnsDb_Hsapiens_v79 = derive2 { name="EnsDb.Hsapiens.v79"; version="2.99.0"; sha256="0k94iml0417m3k086d0bzd83fndyb2kn7pimsfzcdmafgy6sxwgg"; depends=[ensembldb]; }; EnsDb_Hsapiens_v86 = derive2 { name="EnsDb.Hsapiens.v86"; version="2.99.0"; sha256="1gp7xrzddpvmh2vrcp571wyy00skxgxfl39ksj4h0hm1qay0fb2m"; depends=[ensembldb]; }; @@ -108,7 +115,7 @@ in with self; { EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.99.0"; sha256="1zpmq7v55if6q9r0h883q9k8l70ym20b01m9hxf121wb256rl9f7"; depends=[ensembldb]; }; EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.99.0"; sha256="02sx9l1p67ihkn0dfzbi08cpp8x4k2mjdqn7hvzfiaibsbqp70bb"; depends=[ensembldb]; }; EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.99.0"; sha256="1ki2hrn0a55f3ipxny0hpgl5ld9pjkhcwmvvqwwd99f3sqbxf3br"; depends=[ensembldb]; }; - EuPathDB = derive2 { name="EuPathDB"; version="1.0.0"; sha256="08yl7zx5j6ywnrdcrrsvfkkxnvhrhrcddxw0g5sv90gy55zgv86n"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDbData GenomicRanges]; }; + EuPathDB = derive2 { name="EuPathDB"; version="1.0.1"; sha256="0k23f34hnvcf2ig9sic7gf7pypc2jmwymg605qym7x32bjhi6rlm"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDbData GenomicRanges]; }; FDb_FANTOM4_promoters_hg19 = derive2 { name="FDb.FANTOM4.promoters.hg19"; version="1.0.0"; sha256="04sn5x1r5fcbghzw6n1bvy0z8zyhrbk86wsqz1p5gk665vicz8rw"; depends=[AnnotationDbi Biostrings GenomicFeatures]; }; FDb_InfiniumMethylation_hg18 = derive2 { name="FDb.InfiniumMethylation.hg18"; version="2.2.0"; sha256="0vwzqzj49imjdsn8ssiwqi7qic7rqw5pbsiinyxgy7y10fn2i42a"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg18_knownGene]; }; FDb_InfiniumMethylation_hg19 = derive2 { name="FDb.InfiniumMethylation.hg19"; version="2.2.0"; sha256="0gq90fvph6kgrpjb89nvzq6hl1k24swn19rgjh5g98l86mja6nk0"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg19_knownGene]; }; @@ -116,8 +123,9 @@ in with self; { FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; }; FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; }; GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; }; - GO_db = derive2 { name="GO.db"; version="3.7.0"; sha256="0i3wcf5h3n0dawzc1hy0kv74f06j80c47n4p3g3fmrcxlhi3jpa5"; depends=[AnnotationDbi]; }; - GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.0"; sha256="0di6nlqpsyqf693k2na65ayqldih563x3zfrczpqc5q2hl5kg35c"; depends=[]; }; + GO_db = derive2 { name="GO.db"; version="3.10.0"; sha256="17vwn9hibb6qb78sy8r3b9ngkj0nxzxkzi61ffa9mwp1f2nv5vr4"; depends=[AnnotationDbi]; }; + GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.2"; sha256="04gp9a1yf55xqg5cwcc0s896a7j91hvydbnjlr8300wzsxlcjlv8"; depends=[]; }; + GenomicState = derive2 { name="GenomicState"; version="0.99.9"; sha256="0qpa77bsycm3y82jrxq7r27gsygb1qbhkakz3cln3jv3sfkf0aj7"; depends=[AnnotationDbi AnnotationHub bumphunter derfinder GenomeInfoDb GenomicFeatures IRanges org_Hs_eg_db rtracklayer]; }; Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; }; Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; }; HsAgilentDesign026652_db = derive2 { name="HsAgilentDesign026652.db"; version="3.2.3"; sha256="0x6nxvzmc8k4qp382ca32y58awkxpg0b3kc7m1mz9iag6sq7c5vx"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -140,115 +148,114 @@ in with self; { JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; }; KEGG_db = derive2 { name="KEGG.db"; version="3.2.3"; sha256="0qv9in1nmnqcbjxh0y45x33xyw9zdp4jf5hmlvcsh1pclcq4dsh2"; depends=[AnnotationDbi]; }; LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; }; - LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="0.99.1"; sha256="0v7zyp6mngdfrqgx0fb6lj0ara7q4ch2dahnwqjk5y9psmvi8m16"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="0.99.1"; sha256="14yl5d4vmm2hjrlxsflwvkw18j0kcz364b3mc3fnxzbk8phisy3l"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="0.99.1"; sha256="18w8ay874qjs4qgb3g1j77k2fspvvvbyy3p85wgzy1yl839ngy3b"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="0.99.1"; sha256="0qbc5942g57mjdlhqpnapwq58bmi5xbc0mrqbqkfbxpx881ka2v6"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="0.99.1"; sha256="0wpx9dg2nhw20f3vvmaqy5yip8xwg1niswspxs4jv9krd0z6h5d8"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="0.99.1"; sha256="0nycj3h69ca2gxxmc08zvf0jv5zylfayhd6sgzrmqz0zsr0n5fxk"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="0.99.1"; sha256="0g690d63sp5pb0i28zvi80y41n6b31mzza46invjvq9c1j2rijzd"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="0.99.1"; sha256="0kmd69a31hw8i2p8qg64m074ypa102cfa7qpyz2m7nr6gwb3ik3z"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="0.99.1"; sha256="0scycwpdmr6yvfyqsani1372pmyqxzvv30wsvy8hx3km7dcd4ypz"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="0.99.1"; sha256="1b5rzb9kpnak90fb55y380qmspd8gah3wxvsliv1lddab65m5ch3"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="0.99.1"; sha256="1p1crrh3wkinvhqmy9b1h4j9yfvwbsykhm6b0xlhn0kzdqxlizjf"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="0.99.1"; sha256="0aqzcll2ylzbbq42ns0hp7l9p6343l2qlsv5zkglla1bxdxl6m4h"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="1.2.0"; sha256="1y2dgmqhv0x4ydvxq6dcg5m0gzcvlzb9jq4hs3axdyy8d62i8flh"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="1.2.0"; sha256="04z4fmfyl1k6m3paab6ip9h015q90xpxxn5lccm03k3pcv7wf5mh"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="1.2.0"; sha256="1kdcm469qkvncw92c5wjlgnfc9fnqpn15nc124zv0ykpx34fd922"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="1.2.0"; sha256="1amsik0g0pl72jfi8v9jnqpfs8rdsrq1ybly79lyhq1rpdjicayk"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="1.2.0"; sha256="16c0fcw6y4nqgvwzx3v8h822dbw3cbmb8h4sd7g9zwmylibbl35g"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="1.2.0"; sha256="1rdamsg3gikh22sfkafacl0b8507z5hk28j1vcaxdscrwwyrc6bz"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="1.2.0"; sha256="1qdyh4i016i40zn72h1x7194x1wi8pddl6cyln658k334p60x86l"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="1.2.0"; sha256="1viw7vhy3m7b7fwkm38y7f26bzywl1n2i1cff7mp91czss26bq9s"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="1.2.0"; sha256="1s5i4167ygwq35j60ns4f1yf6llasxx6wad61xng5p8lgq3186nr"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="1.2.0"; sha256="08xnr1wlg3lkjdmjdvy2i12ki3ym7z4gr3zvyj2ghkyn0gyd73gp"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="1.2.0"; sha256="0hqns1c4xgay7aagbhl46b9zwf5hp1p33jf9f28l5mxvvc96zrbn"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="1.2.0"; sha256="0kl6f7a1fxxrchz8s5dsh2vqsa8ckigi4clpnr76qvhlcfn77hk7"; depends=[LRBaseDbi RSQLite]; }; LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; }; LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; }; - MafDb_1Kgenomes_phase1_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase1.GRCh38"; version="3.7.0"; sha256="160whyhwjspqji6ys19qgi4y3k7z1qqzr75nhpw0yl8h1rc6rfg0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.7.1"; sha256="1yxhb3kysgj95wdp7v5kq3bvn9xj09ywkfm2fdrkqxmzpan7q9q5"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_1Kgenomes_phase3_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase3.GRCh38"; version="3.7.0"; sha256="0z0v2kld7xqk2plrwb594q3al2kxi64k5phyknnpb0hhgddl688z"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.7.0"; sha256="0rg4vzk3ik2ikdr57fp1za37kfpci6ha0qn8wpnyf8qyc3h9q5xf"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_ESP6500SI_V2_SSA137_GRCh38 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.GRCh38"; version="3.7.0"; sha256="1iybhk64lqar1b8qv1rjxzf53mci9bq684m4l7zqrz8g91jx7myq"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_ESP6500SI_V2_SSA137_hs37d5 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.hs37d5"; version="3.7.0"; sha256="1nfcnlwcx1sr2z4icg893zv3j9c9gnhd0nbgnjrl1fh2nrl25wsd"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_ExAC_r1_0_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.GRCh38"; version="3.7.0"; sha256="1xs52xivxjzg14d0fr3ifb29shysxvw062c3wzb1nfmnydixcqmf"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_ExAC_r1_0_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.hs37d5"; version="3.7.0"; sha256="00b022hzwr0l6m9wzw76iirdq5szvi5z8a9yi2i44sydhwqsb4cy"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_ExAC_r1_0_nonTCGA_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.GRCh38"; version="3.7.0"; sha256="1dvzzwj9dhrls8caabdcgddsk64a6q9jqcya424h8n48fkx6fpjn"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_ExAC_r1_0_nonTCGA_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.hs37d5"; version="3.7.0"; sha256="10rn7nqrnhmhdqcygi8l3cwf1385jyy56qzqjgqyhvmi4g8dnjsn"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_TOPMed_freeze5_hg19 = derive2 { name="MafDb.TOPMed.freeze5.hg19"; version="3.7.1"; sha256="0a8rgh3lkbplg3y1yl0804f55dlw7v8lcb33ygg8kg39dk60m102"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.7.1"; sha256="1kxk3qqw1igkygqmj8yjl4cp99fan1w84gilh6q35nsaja0fapa8"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_gnomAD_r2_0_1_GRCh38 = derive2 { name="MafDb.gnomAD.r2.0.1.GRCh38"; version="3.7.0"; sha256="0dp82x6dag4ndizvppr2g5x1v8sbj08r6n7mi98c89fn4f7nvqqw"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_gnomAD_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.0.1.hs37d5"; version="3.8.0"; sha256="0kb50g4kmj1b4xm9p8q6j1yzpv5ygxf71vqhkb7c0ajqffqbyznm"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_gnomAD_r2_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.1.hs37d5"; version="3.8.0"; sha256="00ld23685xlrkx9rpgrcqaycq3zxbxqg734r99avrw8p3lmj4fvc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_gnomADex_r2_0_1_GRCh38 = derive2 { name="MafDb.gnomADex.r2.0.1.GRCh38"; version="3.7.0"; sha256="0hwyyqa4g3hp85hk4b6qfzm10yk6h20sh0f2mf09yr0hpmkjyl59"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_gnomADex_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.0.1.hs37d5"; version="3.8.0"; sha256="0xz6ayip0cdbal6gsc8wpjyg3rr1kadaddv8flw5k8ky84mckzbc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_gnomADex_r2_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.1.hs37d5"; version="3.8.0"; sha256="06vicw9z05j1pw30sw0f2nkcixc14yn3anq0g3317i3rb1kvmwid"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.11.0"; sha256="02ysykmbn1b6rv3fbq71g9lnv16gvxyvb9p9smvm0k9brb7s0q24"; depends=[MeSHDbi]; }; - MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.11.0"; sha256="13x69ki5g99hravrfdll98z2n7nghvf02v920q4g2bgjzzh68sks"; depends=[MeSHDbi]; }; - MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.11.0"; sha256="1sffv89v1vrlgy36kf7q7ixnc2iwfaa2h0dsxrg0pjmzsq669h9s"; depends=[MeSHDbi]; }; - MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.11.0"; sha256="0ssivaq31rjagw5sdjg9ai3bm73mdvdrkqz0snf3phdgxpvldqms"; depends=[MeSHDbi]; }; - MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.11.0"; sha256="0cl95vipqcjf1pb9bjzvxa4dc0d5rzac84n9f6l061vhifa2c3pn"; depends=[MeSHDbi]; }; - MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.11.0"; sha256="190h3pch16bzx0h674kwywcy3pr1y16jbzczbmmvsxg1l2j549zm"; depends=[MeSHDbi]; }; - MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.11.0"; sha256="0w6gq9xy1v84ksbd849jpj073s51fbhgss8wl6ax4ybxvfp22m0s"; depends=[MeSHDbi]; }; - MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.11.0"; sha256="0jdxvnhxrajhd5dr6hzfii7b1n6x874qfc8999pw8y8rwh8c4ln7"; depends=[MeSHDbi]; }; - MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.11.0"; sha256="0vqyanf9n9ji77zkck3vyrrhm87hx3yxiy9fpwal6a0vh31vrjb9"; depends=[MeSHDbi]; }; - MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.11.0"; sha256="11f9jibxf0amhixhs2pvmx6ir1530qkm9xcjrj09hwyx687bs3z8"; depends=[MeSHDbi]; }; - MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.11.0"; sha256="03nbmbnbfvpja1p9rnqy1mpamlab0fd2y4fkx456jmnl87m1zk0n"; depends=[MeSHDbi]; }; - MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.11.0"; sha256="0pd9gigwrckz9drh3x7n9nvvcq2q2wwmczkhhkqlpp4qhg85yp7g"; depends=[MeSHDbi]; }; - MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.11.0"; sha256="1rjb9ldrn2jg73p2j9mjn61ljw83bhr07yq7482lp4mglhwvqibm"; depends=[MeSHDbi]; }; - MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.11.0"; sha256="14ywqllqgynwfxyxrkw2d6r7m2n82znx9s15l62d7jb88pvaajn6"; depends=[MeSHDbi]; }; - MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.11.0"; sha256="0b5b5dyh99gykdp3whdz7rjz1862p3w4jigy7s1bjmhv4pm3bn2d"; depends=[MeSHDbi]; }; - MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.11.0"; sha256="1cbwqyb4ja10j0250lggbpxgpivf0xj1m7hn4l687rdidxgrmy4s"; depends=[MeSHDbi]; }; - MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.11.0"; sha256="0b5q8yclcx18f8aq45ikv7qyw0xfsksjf1fbl6fprflvzfz2cnir"; depends=[MeSHDbi]; }; - MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.11.0"; sha256="1rd90rzipaa480sahh7pqlv1qzj1wcx543gkshj6mcfkr6r08zci"; depends=[MeSHDbi]; }; - MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.11.0"; sha256="0xg2mi60qlg76g1zxmybcixci8nivw4ld91qxf13jybcr0mwf9xn"; depends=[MeSHDbi]; }; - MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.11.0"; sha256="0l80s6v7p2n7p17chbk6a7y5y2b02z38x034jwg3yvyfqy073r11"; depends=[MeSHDbi]; }; - MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.11.0"; sha256="187zq75qz7jysz8jg5k5sgvxkrpvdyyi8xlsidi774nyb7z5d96l"; depends=[MeSHDbi]; }; - MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.11.0"; sha256="1aicyzgw5nx6z9q339cd1iabi7a1yjswla0j94anqwh783lqrpxq"; depends=[MeSHDbi]; }; - MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.11.0"; sha256="03rvcxawyhckg693w2ngnk3sljgz7idha6iqyax8p8wagl2h5ipv"; depends=[MeSHDbi]; }; - MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.11.0"; sha256="17d3ankadjsvddfqxqm3hnqcmsr2rknkbvraq6zpdl7xw3r21yfn"; depends=[MeSHDbi]; }; - MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.11.0"; sha256="1j3wsmspg7w30y04l173pihac9xg633w8zj2scz6jnph6rgxw3p1"; depends=[MeSHDbi]; }; - MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.11.0"; sha256="0640jfik9qp15h5180rn1afd2kv2wh5s0nbv2zjiz6089csb2fnf"; depends=[MeSHDbi]; }; - MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.11.0"; sha256="1y058sma4p48fj5f8v2i79nak5892pkk7rmr3i18jv44c8246zzl"; depends=[MeSHDbi]; }; - MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.11.0"; sha256="03dybrs5zhnil83jp37hq4rh8ybvyjnqpkr2vwa7f1kd65mq33za"; depends=[MeSHDbi]; }; - MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.11.0"; sha256="032kjhsm39jck9gxlg15g4x6n4r2iyi339vm6b9v4xcays45h9hi"; depends=[MeSHDbi]; }; - MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.11.0"; sha256="0h60gqkc4cjkbqs8i3x6z774qq4ihp20bssi70wli6fvsiysgbly"; depends=[MeSHDbi]; }; - MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.11.0"; sha256="1c8rg4h6gcs4y5gxz1z66a0ma3xpg4sdp6zwzcyrq02r2vjwj6ls"; depends=[MeSHDbi]; }; - MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.11.0"; sha256="03aycm5222wkx6rh7x204rkcxnh6amghm2zpzqiy4c5a2a871y9d"; depends=[MeSHDbi]; }; - MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.11.0"; sha256="0qqwwa3hk8ds2nv7xndqx4z9s00524sqrpgxh690yhdczn1ridqd"; depends=[MeSHDbi]; }; - MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.11.0"; sha256="1v47a80lvhhbl7sqx881nx1m4pqi6mprmgd03cvk4vhrgv74ji8f"; depends=[MeSHDbi]; }; - MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.11.0"; sha256="0mpabfvji1y1irgm5wkbinabriwbbb6wg6a0rc4mq5vn6j8nia36"; depends=[MeSHDbi]; }; - MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.11.0"; sha256="1sb0b82ibvk2n22a88c7qkmb3wch6zcgaah54p920dih2xxx24nb"; depends=[MeSHDbi]; }; - MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.11.0"; sha256="1i65691h3w34kvqswfkg6klpj8gm39p6csa8da4hlbwc7q58zzpf"; depends=[MeSHDbi]; }; - MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.11.0"; sha256="12yrsy71g0r6w028i56kxknkb4gr34x4d6064m61023234j31j69"; depends=[MeSHDbi]; }; - MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.11.0"; sha256="19ihdqwlrifd6nyi1bbxnjbq7qqb535d47mm5h0f1pz2h6w6jps6"; depends=[MeSHDbi]; }; - MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.11.0"; sha256="1f2f9vqdaqi6iak6yg3rcgcpvhaz76zl4hywnlz1gi7aszxiff0k"; depends=[MeSHDbi]; }; - MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.11.0"; sha256="075hhjahc34bznvmqrlc6vnlq25c4ybsyd6ry5qmnzccpxyqhgv8"; depends=[MeSHDbi]; }; - MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.11.0"; sha256="0c7kb73jrr74a05jgyf903bvy92pn23aklflnl2cqqwxqjc6f9hm"; depends=[MeSHDbi]; }; - MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.11.0"; sha256="1zg7c08z6j02sg74ff1q3hnmy5bszd6g5dyr0hxxqivx28bmirya"; depends=[MeSHDbi]; }; - MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.11.0"; sha256="1p70v5bvhawsh954mmnxiy734n0z6b0mfl4j3i2g3jijwrds9f6v"; depends=[MeSHDbi]; }; - MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.11.0"; sha256="0997k7iwq49sf2fn88lgx5j3rhsv9g7mldsm2bpsqmw52d8j568f"; depends=[MeSHDbi]; }; - MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.11.0"; sha256="16pxwy7yycdp59j3nvz58jc8h2y251b4prpk4nn589z7pk37hw52"; depends=[MeSHDbi]; }; - MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.11.0"; sha256="0dmdfi983i2sf56b06p7q1w7n8ik3j1dkfw1x1cc207wmmns4916"; depends=[MeSHDbi]; }; - MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.11.0"; sha256="024076n31mpz2fr7dbf5di6gxn1w1gajx95065vl4555zx46i9n1"; depends=[MeSHDbi]; }; - MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.11.0"; sha256="0rbnysb12i2f1a9xz0869m5n031j60c8bxnj1cp0zxlnylamf7w0"; depends=[MeSHDbi]; }; - MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.11.0"; sha256="1h9jz00bgz54nknl95jf60qqgmn5iyq766sdkxn7r54h9315c9g9"; depends=[MeSHDbi]; }; - MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.11.0"; sha256="1b4nhix3ky4d0cm8hix9m7chcgdyskvd0h7fj3k13a4zxyxvfw9x"; depends=[MeSHDbi]; }; - MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.11.0"; sha256="16fcswjrv056g5d6ikf2g8af470djf02pyxhp5ib6gk932vl7kp0"; depends=[MeSHDbi]; }; - MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.11.0"; sha256="08cdkyvwss0cczd6j19j02950jpqhhzi79y9swqnzzh3nydb3aqj"; depends=[MeSHDbi]; }; - MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.11.0"; sha256="09nigd6hc3iy3s2r70ixfyj04la8cnaxhvr5i1k0adapjgf4q1mx"; depends=[MeSHDbi]; }; - MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.11.0"; sha256="1cwhbrpiznkfbkxchpddkr68jzcxzn0mvn8cy81dm0vj4x8dxjb8"; depends=[MeSHDbi]; }; - MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.11.0"; sha256="0psaqhdi4hicy5vkngkh7ig5ndsjl768n9fg36zlvqllww58kfis"; depends=[MeSHDbi]; }; - MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.11.0"; sha256="0jdwxkwinbnvap0mpirzcd4zgfvhsmca2r57s2lzh2i1x24hxa4c"; depends=[MeSHDbi]; }; - MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.11.0"; sha256="16qcm0d8m53dkwfbcsygbm3xj7x6hblwpa4agds5vnlkb26m48qn"; depends=[MeSHDbi]; }; - MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.11.0"; sha256="1w3zqynqjv79ixxnmn3khvj3p6586nq48dx00rap6vzirmhzigqv"; depends=[MeSHDbi]; }; - MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.11.0"; sha256="0ryxhk5g07fpnnk72q5a2847k6w509956fcxnrvwvp7f98p3z50x"; depends=[MeSHDbi]; }; - MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.11.0"; sha256="0i1772rpq95ppzxa809ms1r65d9rk5vqhcl36ndjs2lhzdydw8fz"; depends=[MeSHDbi]; }; - MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.11.0"; sha256="0xgi89vzhxkmqx0y84i58jkxikksqdi64r82p59ir6l1anpyvvc9"; depends=[MeSHDbi]; }; - MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.11.0"; sha256="0g0fnackq1yjaw0b3ppzbcj0sfx288wm6cv57ly69svfg1n0wlk5"; depends=[MeSHDbi]; }; - MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.11.0"; sha256="1z29d19is5lq8rqrkk1dyifgn0v2i68pbw8i7dlwnnicj2sfpynb"; depends=[MeSHDbi]; }; - MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.11.0"; sha256="0dcxjlpc9diz1lvrkpbrab5zjz96r837x7ij9786966a3x458xk0"; depends=[MeSHDbi]; }; - MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.11.0"; sha256="0gpj4i2mls1qkyivxy2gk3b8w9vkxnwf2b0cpmbv5bvpjcsbw47i"; depends=[MeSHDbi]; }; - MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.11.0"; sha256="14knm1h8mp5qfjbny2wwkj772x72laxgymhsa04m78mb38qhypwq"; depends=[MeSHDbi]; }; - MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.11.0"; sha256="0hwgkq669g99yrkbpk3pjpxbz7q0vwvkcx3rrvdk9dnjinlbcn54"; depends=[MeSHDbi]; }; - MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.11.0"; sha256="1mz986apgfd6sn62wws948yi46r87fzaszxnv450fgc42l23l0jx"; depends=[MeSHDbi]; }; - MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.11.0"; sha256="0dvz5xbx6vdmqibpq8xmpdjfvvqw7iqq3w4d350sxj5kaw2afp5s"; depends=[MeSHDbi]; }; - MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.11.0"; sha256="08hyvaqsvdpcizsqr53ab6bfh1fnlsj8d62pq03lpgr96rlyqi8q"; depends=[MeSHDbi]; }; - MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.11.0"; sha256="0mid3qmv7kxc7kn69vbhgchvrbv4fig97nw9zxsbd0rj66abzas2"; depends=[MeSHDbi]; }; - MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.11.0"; sha256="1pwq58mm7ripnzxcn13k1y157pjasrv30xxmrrqb4rv55nk61vbf"; depends=[MeSHDbi]; }; - MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.11.0"; sha256="0qd75lkyrs864sy3sci3bablipn9gabk24wbriis9bi0qf7hccv5"; depends=[MeSHDbi]; }; - MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.11.0"; sha256="0djsx876h0xz0h8jhs6yad8iqqjlr72b0fxasqgh89zpfp2hkvwd"; depends=[MeSHDbi]; }; - MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.11.0"; sha256="08b92lhq2gbvbm7y0q4zc991wi1fjhm68n03b782h2g6syczmlma"; depends=[MeSHDbi]; }; - MeSH_db = derive2 { name="MeSH.db"; version="1.11.0"; sha256="1l6hynwmhb8p666q8n9dnvd0nhjy1f9nz2jg3z2p13dc5jl6syiw"; depends=[MeSHDbi]; }; + MafDb_1Kgenomes_phase1_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase1.GRCh38"; version="3.10.0"; sha256="057531mvxip32lyqak4hh964ms0cil29p5cch5fpjw5vbbzidrlc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.10.0"; sha256="0vsjik59qa36w402bcrd5z27wc9vyp4gl0ffcwskd9iwjqim0phi"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_1Kgenomes_phase3_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase3.GRCh38"; version="3.10.0"; sha256="0ibww7ml5cfyx8h198fgrnf13vvsxxb5spf7hcmm6z3hha6j2ij0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.10.0"; sha256="1c2bxgy3bpbszfsqlk262lv45x1fgqyywk9i9nax7bpahlcpp68d"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ESP6500SI_V2_SSA137_GRCh38 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.GRCh38"; version="3.10.0"; sha256="0z33c0f8janzvlldmkcfzcmz4ymkw94m3qfjf75izc08xhyw1wx8"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ESP6500SI_V2_SSA137_hs37d5 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.hs37d5"; version="3.10.0"; sha256="1an0s5n4nwzmaqr57qydgkazbqf0gywcs2zhlbbr6nxk97zh8374"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ExAC_r1_0_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.GRCh38"; version="3.10.0"; sha256="02mlwkx9kal4h1q1h3c2pdragir9bh63vg1wyagmh8capf19zx5c"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ExAC_r1_0_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.hs37d5"; version="3.10.0"; sha256="18czbllphsccb2hs02g6jz517ylxsvx12czwh4xz7vym6q4br0cz"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ExAC_r1_0_nonTCGA_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.GRCh38"; version="3.10.0"; sha256="16rsm24nlz7jdnqk1p0avn9dlxkbbjd50nja5pcg0z18m30srlya"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_ExAC_r1_0_nonTCGA_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.hs37d5"; version="3.10.0"; sha256="1srwc9n9x0ilipqwvm95khy4w2dnn1fkxyrrlcqfwv96gl7141x5"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_TOPMed_freeze5_hg19 = derive2 { name="MafDb.TOPMed.freeze5.hg19"; version="3.10.0"; sha256="1fxq5jq4g6rys909v0a4lbrcgfdk844wgihn0ary509w8ifdkxdv"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.10.0"; sha256="0yd9r26l2s3ykw5d2lndnx4m1h401g7hsnkk0wywczdc1xa39y4n"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomAD_r2_1_GRCh38 = derive2 { name="MafDb.gnomAD.r2.1.GRCh38"; version="3.10.0"; sha256="1bshq6ncns7xdrpkkc84m4x6a1pnm3ssp02f0d23yhlkhh0h40zd"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomAD_r2_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.1.hs37d5"; version="3.10.0"; sha256="153dy3lx0islfdkmyik7lxp1w2yzb0bqmia673hlwi4rmvns112h"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomAD_r3_0_GRCh38 = derive2 { name="MafDb.gnomAD.r3.0.GRCh38"; version="3.10.0"; sha256="0f0sbfi6vlgqwhmipsvp59vi5npq33i5fa9g3ilhijsf2hb1xfb9"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomADex_r2_1_GRCh38 = derive2 { name="MafDb.gnomADex.r2.1.GRCh38"; version="3.10.0"; sha256="1v0sdjmn9z8gqn4yj4v04zycj3ngr32r04zqmkp6y41hcgdr8lxw"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomADex_r2_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.1.hs37d5"; version="3.10.0"; sha256="0y42ncmilijdxsgqsmskz7gff3il3fdf2kpflknmz1z9kybzaday"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.13.0"; sha256="0l55b03072s052ji52glqpqc8x0z7d4fkf392113bskmplgcg3ny"; depends=[MeSHDbi]; }; + MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.13.0"; sha256="061bp9y592h57y0i4y6aah9vln23f1mk1yzx9fxhimnd4rzmwzl4"; depends=[MeSHDbi]; }; + MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.13.0"; sha256="10253yy1gv96x6h92xz35qhz087ma6whr5pbi69mjdfc21pzyc7a"; depends=[MeSHDbi]; }; + MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.13.0"; sha256="19aw7vq6iafhjb1n7kgbyaib2di682dia0yjc4r3cnzv7k7kv8z0"; depends=[MeSHDbi]; }; + MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.13.0"; sha256="0ljijw7p5nxvgda2jb3gf6x03y046ihxz7nl2s90rgf4s1fjciaf"; depends=[MeSHDbi]; }; + MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.13.0"; sha256="1afv8yf2yggid12id0j5v5gf5qhcdmanfanp2d13cnkzgxkr88js"; depends=[MeSHDbi]; }; + MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.13.0"; sha256="1amgb9gr5aa1cgggf2x5ailzm4mfq78lfqnx1yzq1ix3nh5idajf"; depends=[MeSHDbi]; }; + MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.13.0"; sha256="0byxvlwcix154qbpvpgv9zblyn1wx6npn366303v81r6x5gh4qkh"; depends=[MeSHDbi]; }; + MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.13.0"; sha256="1v1f7b0qyii8nakn7lhckbyqyw43101i2y0dcamp5lds8m79691d"; depends=[MeSHDbi]; }; + MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.13.0"; sha256="1rr4yr0n2zdkcq2xj7cyv683sgv5mnjwcylz4r8wkrdhji28zyyh"; depends=[MeSHDbi]; }; + MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.13.0"; sha256="1nz96wyw99rz2wlsa59y36ddxg3i4vz116i4sjvm3ww2q71nimmr"; depends=[MeSHDbi]; }; + MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.13.0"; sha256="0irsxad7s1asllwajwy1bl2frs22sgwv60fdgnslgxmngg5v6jbc"; depends=[MeSHDbi]; }; + MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.13.0"; sha256="0qq08f245qsq6c9g38wcbn9gnhhx2wlsas3na1n5fycr5d19qbvz"; depends=[MeSHDbi]; }; + MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.13.0"; sha256="0mjg8dinlp1qqnf2h1lpyhig9ywa9x99isyvj2z37mrbk9mh6si6"; depends=[MeSHDbi]; }; + MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.13.0"; sha256="1xlcn55v3hyngdqmb5a3v64ll1cmm1yd8gbxw3sbbbnwp349w2jb"; depends=[MeSHDbi]; }; + MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.13.0"; sha256="13naakq86kgkbd8cif5gi7hzag64xkp8mddrwn4hc67i1dzlfyq0"; depends=[MeSHDbi]; }; + MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.13.0"; sha256="1b4sl5qiwh0vxm1svwqwsbrz2b88jmf7s14nwhb27431ml5lya03"; depends=[MeSHDbi]; }; + MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.13.0"; sha256="12qak3gzbr7hpg08nmpa69h0qw0v4kdplf10ilycc8ra1nrm9s8x"; depends=[MeSHDbi]; }; + MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.13.0"; sha256="1gp33ga0gdd09flz1c9q7hf3y8si238zb6hmn1v9pqmkww5pns3g"; depends=[MeSHDbi]; }; + MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.13.0"; sha256="0v3jlfg95fgh4f5gnqz1prb2lwj1bn7ggparxqzc63j0jws0wmgp"; depends=[MeSHDbi]; }; + MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.12.0"; sha256="1vhg07r0yk876zlzbn86nj6g91ilrnfrj3p5q2pkrcsic0m5nwcw"; depends=[MeSHDbi]; }; + MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.13.0"; sha256="12kc26wsg390hzhi4x2rmnm1s38sqs4nckkvrnmv70mjabg34w49"; depends=[MeSHDbi]; }; + MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.13.0"; sha256="171nrhd4nqpgcaaa62gj1di2xdsy3n8pp09lsbyq4slasmcd450w"; depends=[MeSHDbi]; }; + MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.13.0"; sha256="15nb1pbnfkhr83q06irghi4r7la5h6dn993la3sn1f8614hcr2wd"; depends=[MeSHDbi]; }; + MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.13.0"; sha256="1jgvbp0g4armmvg2w5rpxkx8zclll5nl6j6zbq9d1w7kk4lazw83"; depends=[MeSHDbi]; }; + MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.13.0"; sha256="0p3p4ld74hszgvv6xd5kmd7i9glv1l4mdqigglr1sk4vig1qwg47"; depends=[MeSHDbi]; }; + MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.13.0"; sha256="0pbd49s4n1mar58did4amrq5h78ic54gk6fnlyicddf7xg24qsp5"; depends=[MeSHDbi]; }; + MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.13.0"; sha256="1bga7nlfkyqqxq4m9c44l6hnswqa3dfbjzbnnyh8xmyp7m91kbj3"; depends=[MeSHDbi]; }; + MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.13.0"; sha256="0vaz520r54ydbb0why68hnigd924y3vk72357cms363qs6753dij"; depends=[MeSHDbi]; }; + MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.13.0"; sha256="1fjdb5h3dsgxk38c1fff30knnhav9w6pdl7vqdfdhq7642c6a1y4"; depends=[MeSHDbi]; }; + MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.13.0"; sha256="1vqwdf8sj0qid2df0qqhxlwbccmlmw63kmhdmz49fz3hxyr081z5"; depends=[MeSHDbi]; }; + MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.13.0"; sha256="1ixn62rn6vc17ks23hn9hkfyynp3p7mf9wq3rw9wiyyzpl6xgqw0"; depends=[MeSHDbi]; }; + MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.13.0"; sha256="118j864y3bn386cgjbwqwvdjflk7f510yzx451w9mcbfm7af8nqh"; depends=[MeSHDbi]; }; + MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.13.0"; sha256="094h4w8p0h81pqz4f1ykk0285fq5cayvkv01712bi85qqvyc8vh0"; depends=[MeSHDbi]; }; + MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.13.0"; sha256="19xj1x0bnxk8y3n7cjihp7aa1l6vvy6d3m949zv0cs9ia8mw5lrh"; depends=[MeSHDbi]; }; + MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.13.0"; sha256="1m2zi73d23hqa7dn8ab6bm3ynjc4mngakcba5wa3fkvv972kba26"; depends=[MeSHDbi]; }; + MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.13.0"; sha256="0sgp5hckh3waa1bp43rsnx6hlcvjr7a6yw46m6r3jzwdfpkmbh4v"; depends=[MeSHDbi]; }; + MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.13.0"; sha256="17k0h1jfiqwg6396m3mnsq3v042p8rck19wdhrgdasb6vp7rnk7w"; depends=[MeSHDbi]; }; + MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.13.0"; sha256="0z68zs190sv1v7r0059hf5c3mcrv2hil3hx3liycck2fiwarjw8d"; depends=[MeSHDbi]; }; + MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.13.0"; sha256="0nbc8710nwjlxxcslljcfj72qlq1k64i8p4jvyddjp8fj8anca9f"; depends=[MeSHDbi]; }; + MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.13.0"; sha256="0s45w1rnz79azqkk852knicviqc6jisxnpkzmm4j6ydjqibz4xv0"; depends=[MeSHDbi]; }; + MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.13.0"; sha256="1azm323gqax1ffixvqqghqbbmv7gfq5jhxhn1qr07raml1z56yiw"; depends=[MeSHDbi]; }; + MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.13.0"; sha256="0aix6k1lmdd4wms4dcmhw35gsyn07cvir60wslcabsvccjxbip4i"; depends=[MeSHDbi]; }; + MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.13.0"; sha256="1fb3xhwf08h91pmb7nmkz68zwrg8ac1sk55923baa6bn9bwli2ny"; depends=[MeSHDbi]; }; + MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.13.0"; sha256="0py8r05ix4k6xfm3jnzkgzk59gzc1bj43271rbgsmqlyh42abgay"; depends=[MeSHDbi]; }; + MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.13.0"; sha256="01mmn4021cscnp9wfz84rxckqqfn4p98bh4g1mlgwb7wsgf5nbc9"; depends=[MeSHDbi]; }; + MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.13.0"; sha256="1h4y7iqqb4fili8k4k11z5nmgd0hq8rw7p7awjwl6w5v4n9im0fs"; depends=[MeSHDbi]; }; + MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.13.0"; sha256="03rj89bmw4j2fc9lnpwx479j5m089jcj6iisf339bzcw1rgryi56"; depends=[MeSHDbi]; }; + MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.13.0"; sha256="1r2c422w1c88w4sh3s8mqpffx10322c3j44qz4ymxgvnarxc3fkh"; depends=[MeSHDbi]; }; + MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.13.0"; sha256="09s2d9hjzzhlig2bnnr5wkpxgf8pj4q9hwvs4sj3ylabvlg5ak09"; depends=[MeSHDbi]; }; + MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.13.0"; sha256="0l0w4px7wp58rqry4xbz2qh5jc97mmw7pvc1dnhkknr6n96fcpik"; depends=[MeSHDbi]; }; + MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.13.0"; sha256="1v4jcsdww7j0rnck3r30g8p57419ai676qlawmra1w6sdflqcpj9"; depends=[MeSHDbi]; }; + MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.13.0"; sha256="0a6mxwmvsh6zcyqw83y7y1axviqrzy2kdbalh2w8xa3yn72z65ln"; depends=[MeSHDbi]; }; + MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.13.0"; sha256="1n197svyc3p4xf3lc5qdjnhlkiadra43bxdqisk2w60jdijnxyh0"; depends=[MeSHDbi]; }; + MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.13.0"; sha256="1h7iqb9kcxcgslm8rab4469vvay3msd3w08bxv3h0mq7q870z0r8"; depends=[MeSHDbi]; }; + MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.13.0"; sha256="0mxs9bjs0pnj9aszfdydkw2kljcixwflvwcaz94my30444c1pi9l"; depends=[MeSHDbi]; }; + MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.13.0"; sha256="03fcidamz9x0xgyl5fsvphc7l5v2hvr4izf6ma2g34a1l1qhs0g1"; depends=[MeSHDbi]; }; + MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.13.0"; sha256="0vyi7awyy3v851ylc95xrn5wvbprq1qq3x1ypsb31qqny940m5rf"; depends=[MeSHDbi]; }; + MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.13.0"; sha256="18amkwn9wglj3a5hh9b0zfd23vizmj1nfa90jz93w1adksjlky7v"; depends=[MeSHDbi]; }; + MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.13.0"; sha256="1yrx8dj0lx77qny0dha68lwy3x3c9d4rkb8gng3by55zgp6hghms"; depends=[MeSHDbi]; }; + MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.13.0"; sha256="18x1q7md0zvb233qw1x6qs8k55hjkh1nd1cvizs2vhsbvzfw9yjz"; depends=[MeSHDbi]; }; + MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.13.0"; sha256="1fqi308z4psspykj1dkq76v94641wq9mnxwj3yzd9j49c8x45294"; depends=[MeSHDbi]; }; + MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.13.0"; sha256="0kakfkkmvmlk22g1aa86grahfbvk8hainar1760r5j8zrny8dvvr"; depends=[MeSHDbi]; }; + MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.13.0"; sha256="09gzlfp958bfkvas0hxaw6r319y02sygmb7ywxvdqj41sxyv63zp"; depends=[MeSHDbi]; }; + MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.13.0"; sha256="0cm3352chz3qaknq0an8gfsk2xbfn0jw5rqss3lrxcq35x1qk21a"; depends=[MeSHDbi]; }; + MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.13.0"; sha256="1hpj2cr8gixqlvfhnqvr5m3m1ngfdrvavqipf38m5cnm1wlqk9ll"; depends=[MeSHDbi]; }; + MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.13.0"; sha256="1ryrr1mr7w6h8xs4f79zmnnv8j4mkjckxjk4npcdiilfb2zg1y3j"; depends=[MeSHDbi]; }; + MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.13.0"; sha256="10ygdjx63ajd1vsgrn2f8isvaxdf2p6yg45yqrmjv3zhbvi1aav1"; depends=[MeSHDbi]; }; + MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.13.0"; sha256="153i3ln2m8rb0445hjplnim4h8dvvmf370zglcc5ww9dcx9m93nb"; depends=[MeSHDbi]; }; + MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.13.0"; sha256="0sm2sg246w35vfv9dam40x85mdv18fpi5j1k31432chrda867rf0"; depends=[MeSHDbi]; }; + MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.13.0"; sha256="0xqapk2fkaj719ih818rpb1ciiblw6zr6a83y0xpwrm8y29m3qh5"; depends=[MeSHDbi]; }; + MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.13.0"; sha256="0zfrjhrw2jrk6yzkmjnxfqws1a2sylpz1rz2im5n3xnlk6l5d0zn"; depends=[MeSHDbi]; }; + MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.13.0"; sha256="0v6g4wqsph3jhxziayijqn63cjp9z4i6jpm5wk431qp9zhr3vw4w"; depends=[MeSHDbi]; }; + MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.13.0"; sha256="1v2blabzcd1vdmc47m9rfknlf4865ppvfx8p2nm9cilrwp29w1pk"; depends=[MeSHDbi]; }; + MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.13.0"; sha256="0ymc65z935yzz0dxvrlx1wj40zmd7192jdav3736syhq6jrwmq3d"; depends=[MeSHDbi]; }; + MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.13.0"; sha256="1vnh6y9jr03cmncyka886wq59qnbpk1d3sqryxjd3d3hyhg7jz7b"; depends=[MeSHDbi]; }; + MeSH_db = derive2 { name="MeSH.db"; version="1.13.0"; sha256="1fdqzbka0bbpzphr64sjabddr1a7mrk310mzjfrwd6sll54am9q8"; depends=[MeSHDbi]; }; MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; }; MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; }; Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -256,8 +263,8 @@ in with self; { Mus_musculus = derive2 { name="Mus.musculus"; version="1.3.1"; sha256="143zdf83gbfqhy8jm9df7gzhw5q3a64jrjrxrzjf0zd76j8s8j6y"; depends=[AnnotationDbi GenomicFeatures GO_db org_Mm_eg_db OrganismDbi TxDb_Mmusculus_UCSC_mm10_knownGene]; }; Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; }; OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; }; - PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.4"; sha256="1vl8anixkhcb9axlszk479yaw48bz1hhgmff41nqk8k8w4jkyn1y"; depends=[AnnotationDbi RSQLite]; }; - PFAM_db = derive2 { name="PFAM.db"; version="3.7.0"; sha256="0ih3xz8vk80xzqwgv6ff3rp1a24qhwd1v1frkq1m6d981g7ymdap"; depends=[AnnotationDbi]; }; + PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.10"; sha256="05jyss22q68j7i773ss29g9z1yifi5xsp7qjaq3f5gwy3131x485"; depends=[AnnotationDbi AnnotationHub BiocFileCache RSQLite]; }; + PFAM_db = derive2 { name="PFAM.db"; version="3.10.0"; sha256="0n71xwg062pvlwvx882m8615d5h9rcxsl20b1sn314p6bkwqi203"; depends=[AnnotationDbi]; }; POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; }; PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; }; PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; @@ -282,35 +289,41 @@ in with self; { TxDb_Athaliana_BioMart_plantsmart22 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart22"; version="3.0.1"; sha256="0j2zr4cddad7z1lxx9m9kfgyy7jajjnblpk9j8igd39ia3ixrpzc"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart25 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart25"; version="3.1.3"; sha256="0a6v0l6p13zmiysi3k8dxzdlxng552qqj9rnlbdavdiidla0pvm3"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart28 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart28"; version="3.2.2"; sha256="1yjyvrbx55y024lqg3b2rlf8pngqw5xi3p83j5ipan05wf0aq6ir"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.4"; sha256="18gmx57savyvvdkgnrvmc4xj3xrakybyx4pkfmpabnqy29z6n71q"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.4"; sha256="04jcx40z2380x760wbl686zvm780y38kls1js215jhmw7hff8md5"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.10.0"; sha256="1pg08ks4nk5zqfmrjnf5cl46sfv7n4r1kvq31xvsgdl01lkq5yh1"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Btaurus_UCSC_bosTau9_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau9.refGene"; version="3.10.0"; sha256="1v7q9jaaj1n2vabjj6ij6pz0g89nqlyy4y4g65irz6cm5mvik4q9"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Celegans_UCSC_ce11_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce11.ensGene"; version="3.4.6"; sha256="0pnqmyi5v9gsk2b56pfxf9qam9nvdmg5j1zag166yzzx0hipasm8"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.6"; sha256="1aq4jhn2c67wibq02l8drrjscmicbj6z35d0jksq8mwhz8k30zn6"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Celegans_UCSC_ce6_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce6.ensGene"; version="3.2.2"; sha256="1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.4.4"; sha256="1rl7yc2csc3fs2iri0kkvpjv34jnhkzc0jhh2a3hnyvhv55lzmf0"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.10.0"; sha256="0n6zlaq9ysfsas75j9ysa3zdgy2y01phdq16gisqh1limsdwalky"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Dmelanogaster_UCSC_dm3_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm3.ensGene"; version="3.2.2"; sha256="1337x23rdmiiza83ms225kri37h16q5hw1lw0m577abcgip3d7c7"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.4"; sha256="18nwjnkbrvrkk6g5jns3h55874hk92fdbrfyjvvxk4daw0p7gii8"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.4"; sha256="1ck4ymlxj0fjrbgxzgdqgbyl3z4nqyc6bczw1cgwblmcv52h3cj0"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.4"; sha256="1cxdrdg3pqwi0rfk5bzik05r1hvxwsva862b7cf7pfcf202dkqg5"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.4.4"; sha256="15laq4kdm85755lk176lqsi2aryi9i85b4c1arrj4qgjkjrbylvq"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.6"; sha256="05nmvqshin09k0rzxr8kn38b7h6bv5g8ycdvi4bvq5pq0q5p59bw"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.6"; sha256="1isd4idvh9flvirrq760cw5lc1nwqjx0q76p9dp01wbbbsb3rfnk"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Drerio_UCSC_danRer11_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer11.refGene"; version="3.4.6"; sha256="0p5pr0fq1l9bp019w2214szf78y3nbw0p4819jcnba1v50y3336l"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.10.0"; sha256="05ssas7dgyz5zz6r5m1fs2pzcvgkzn5pjpw7lrka7jjghi4a4cfh"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.10.0"; sha256="1xlpxaay56mgnz03mm351xw1xdpc80d70dvvqmllwmnmq1p5s70m"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal6_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal6.refGene"; version="3.10.0"; sha256="0ddibdn6shlhqfmlajnq754z4vad7gi55vb5y8j89nc2k1sc5a3i"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_BioMart_igis = derive2 { name="TxDb.Hsapiens.BioMart.igis"; version="2.3.2"; sha256="0590a2hkrpm33hmjg5g0gm6sig3xvc09m0q6lwmafgaajf90h6ky"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg19.knownGene"; version="3.2.2"; sha256="1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.4.0"; sha256="0i0xw0mcn403r911ijqdnrwg9k5bspdnjibfjvnhxq4h8vcfprn5"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.4"; sha256="13nv7l71piwf0frnwplwbac82ad7vxbw31yrfnqvnd1knh7ns99x"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.4"; sha256="1qgm66hnhqb3jyal8s43yri96k1xwb3vamb83894n86bh2g6nlca"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.10.0"; sha256="0lqir16l8wphhpaizmvgmjzk40p90rzgqndgvbms7ickinrpg59s"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac10_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac10.refGene"; version="3.10.0"; sha256="1d1gvs6877649zwgja1z5x0mgci2kirbj7pzhb22xyinif3bhz26"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.10.0"; sha256="073w43cm09wj4y7xaml8f0wls7kskymlb4rw5cijhifjbp17kpyh"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.10.0"; sha256="08l242l9j6r17ghmlxgmz3chdq781kv5zaayhh487qp7rsyz3scg"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm10_ensGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.ensGene"; version="3.4.0"; sha256="0saxi1fdiwd38sfvy1rynd3v44rbp158jv6sjqcivvaqnd84zg9s"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.4.4"; sha256="01lgxc1fx5nhlpbwjd5zqghkkbmh6axd98ikx4b0spv0jdg6gf39"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.10.0"; sha256="0xs9npnhbwll7p62hibs02y4ac23jchdcr25i6a7qwq1kms82qk9"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm9_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm9.knownGene"; version="3.2.2"; sha256="16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.4.4"; sha256="12fdcs4vv4l0d3sksdq76nwwj88f8psiy84rd1jhfw8kbxqrhh8y"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ptroglodytes_UCSC_panTro5_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro5.refGene"; version="3.4.4"; sha256="00mirzp38iqm0l0py1a7mlslnbmkfzzk1krcg6jdyr8gan2sskpi"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.10.0"; sha256="18kqikxrcln4mbl216jrs4wx20a9l7x8v23kapy91svi2br900f5"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro5_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro5.refGene"; version="3.10.0"; sha256="05ydg49rh8idjqxyvrcfc3mwsb1xj4bnjww46gnpgm4hp9na9swy"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro6_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro6.refGene"; version="3.10.0"; sha256="0z4lq7wy48kkxnx29zmrbmrq4qjrj3digwxkw3x54qq80nvzxiza"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_BioMart_igis = derive2 { name="TxDb.Rnorvegicus.BioMart.igis"; version="2.3.2"; sha256="1099vkk8g3lxbgjxsm1p1m3mjj08nsw282mqxgzpnrxf7m6jll76"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_UCSC_rn4_ensGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn4.ensGene"; version="3.2.2"; sha256="0gv8bynfxxa471ap069mjvfrb1d7a0c4w5k8hxkr4hnsm44mschm"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.4.4"; sha256="1h9vmsp8lcr8yyvd1mjm81p8l660bjsx2kyhg3wm96izxgd4i7gn"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.4"; sha256="1k4g78kh52ppr4fd5z4bwzzgw8jg6j3zi129fnny4ks6zkadhlw6"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.10.0"; sha256="1n9x827chp71cv8jm3mm3srr2id4iifnpwmvmrd68a82j03pxljh"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.6"; sha256="1piqli0wdq3r289is8lmijnshm8rmx7rphp2qfymlvc0jmvgs9wr"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer2_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer2.sgdGene"; version="3.2.2"; sha256="0l5gcwhbvzx60p9hjhd31angamb0hkgdg2avga7341j77rd5pwza"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer3_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer3.sgdGene"; version="3.2.2"; sha256="1sjwl7fb3l3zxxbk8gkvzxwdsind0xjj7kmh7dachm6fi17hpb3d"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Sscrofa_UCSC_susScr11_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr11.refGene"; version="3.4.4"; sha256="1c6kbkp6iq6zzpg6wpnbgclp1vsdhh19g220va8b61jhgcccr2c6"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.4.4"; sha256="1yvjwsq9cn9kyjir53n20fbi8nyf1m64zim18w5mv05w9rn86gdl"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Sscrofa_UCSC_susScr11_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr11.refGene"; version="3.10.0"; sha256="02xfl6265wp5qbjnyj45w5lwlx2sfnarxy69cckpf5x0az910i52"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.10.0"; sha256="0kvnxzkvjra9a3wf2qgv3lq89h1hk6fa0x7v9afwwi99xhfww2yc"; depends=[AnnotationDbi GenomicFeatures]; }; XtraSNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.12"; sha256="0a27y0ngg760y5wwcja4dpd7cjd8h5zg1s2b3a1r54s21k65zny3"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.12"; sha256="0k823fvqjmdkmd47m7wyra6jxmv8lnk2i1xl4pp0mh3zgb87hgfb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.12"; sha256="0d4q32ij2x4726wvw06sgmivid0n94vfdmszdyh607xlcahqxa5z"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; @@ -320,22 +333,22 @@ in with self; { agprobe = derive2 { name="agprobe"; version="2.18.0"; sha256="1vnawamcpz16na8nmlq2czfxcr325fwdnngxl65mmnbd0f4lmy3k"; depends=[AnnotationDbi]; }; alternativeSplicingEvents_hg19 = derive2 { name="alternativeSplicingEvents.hg19"; version="1.0.1"; sha256="1v714abdpzhwa450zr66s1yjpxl6lkwi3wjbwn8phn87cgf8rj7q"; depends=[AnnotationHub]; }; alternativeSplicingEvents_hg38 = derive2 { name="alternativeSplicingEvents.hg38"; version="1.0.1"; sha256="0im87mrh1n6kv84q6lm4y15lb93rih88zdpa0jms5az91lyvsf25"; depends=[AnnotationHub]; }; - anopheles_db0 = derive2 { name="anopheles.db0"; version="3.7.1"; sha256="0f940ybh7kr30d9pkqhr0w2yrwsqa25yxbhzhlccn4a6a6svzcwb"; depends=[AnnotationDbi]; }; - arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.7.1"; sha256="1d7cnhbm44dv0g6mjv76sdr8dgni34fbffzkk95rqikdqag8s9cy"; depends=[AnnotationDbi]; }; + anopheles_db0 = derive2 { name="anopheles.db0"; version="3.10.0"; sha256="0rpani2ma6mg0nhlja67m2nm7jfb15c9nhrvjaa8i35z1hryhz6b"; depends=[AnnotationDbi]; }; + arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.10.0"; sha256="14hxvyz8xzkrsirpjy88lzfras99hchzggcs2lvhg2lx858sv0i2"; depends=[AnnotationDbi]; }; ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.3"; sha256="1zrf26cfhlmrb5pyfawwk4v8l1mflx8c43zsxrwkbmxzc1jnc7dv"; depends=[AnnotationDbi org_At_tair_db]; }; ath1121501cdf = derive2 { name="ath1121501cdf"; version="2.18.0"; sha256="1naq8f8dwgbmndx178nm2pw6hjx5ljx0w1wb4dfjifnl4bs5rqcc"; depends=[AnnotationDbi]; }; ath1121501probe = derive2 { name="ath1121501probe"; version="2.18.0"; sha256="0a2nd8zhp3ybis780l3rrmwcxskbl3a111g8w6m8qfwsw5vnlqg1"; depends=[AnnotationDbi]; }; barley1cdf = derive2 { name="barley1cdf"; version="2.18.0"; sha256="0rbij5cqr2sz33y5waybv85nrcgf70iwj5gk13g0xn9p1l1zxyn2"; depends=[AnnotationDbi]; }; barley1probe = derive2 { name="barley1probe"; version="2.18.0"; sha256="1kh5r748b4vkmvlfaclmrh07ypbrzgxn90liqfz1rwkabh6rfk71"; depends=[AnnotationDbi]; }; bovine_db = derive2 { name="bovine.db"; version="3.2.3"; sha256="1i8mgk60hlmvngb4c727wajix9mca9gfg0pzxrnfcjwi87rpw7fy"; depends=[AnnotationDbi org_Bt_eg_db]; }; - bovine_db0 = derive2 { name="bovine.db0"; version="3.7.1"; sha256="17q8hkfips8znwnkk062m8xsvcpaf6ynpf2jjszrcm02495vbw45"; depends=[AnnotationDbi]; }; + bovine_db0 = derive2 { name="bovine.db0"; version="3.10.0"; sha256="07dg88d10cb4b5cwr7la9lj4wmn6hmhl90ilhgd5i9ai1n4v925d"; depends=[AnnotationDbi]; }; bovinecdf = derive2 { name="bovinecdf"; version="2.18.0"; sha256="13mf0yy0dypkm5n2ghl04xm6ayb9bn9qijqhgynksghi7s2k34mb"; depends=[AnnotationDbi]; }; bovineprobe = derive2 { name="bovineprobe"; version="2.18.0"; sha256="0i4afa5dksnir2nfrfh2cynjm59sm6vfaqa9wyag8cxg7c2nlm1i"; depends=[AnnotationDbi]; }; bsubtiliscdf = derive2 { name="bsubtiliscdf"; version="2.18.0"; sha256="1rihrjim37b49rhqr4nxga8sp67qri9xqlqc141mhbngh6cw3iyl"; depends=[AnnotationDbi]; }; bsubtilisprobe = derive2 { name="bsubtilisprobe"; version="2.18.0"; sha256="0k99hvgaswn96x4yanvr9cy8bdy69sd5q7yp6dj9synxj7s1fcw9"; depends=[AnnotationDbi]; }; cMAP = derive2 { name="cMAP"; version="1.15.1"; sha256="0pzizm27rgcaic7wsh52z30v1jwarmz4cwh1mksbygp63k54mwiv"; depends=[]; }; canine_db = derive2 { name="canine.db"; version="3.2.3"; sha256="0wbyzhk827l49yxzimvznx9z6yag5nd4djm2hddysf5nk1ndapqs"; depends=[AnnotationDbi org_Cf_eg_db]; }; - canine_db0 = derive2 { name="canine.db0"; version="3.7.1"; sha256="1z691m0ap7x5sb7pbxlk8cs5s6hwvgvdbjjdxlfp8vilciwrsgwn"; depends=[AnnotationDbi]; }; + canine_db0 = derive2 { name="canine.db0"; version="3.10.0"; sha256="1zi3g22iagpxs4j9p07g5lss0bvxmhp0lkq3dwchzd0bddph8xnn"; depends=[AnnotationDbi]; }; canine2_db = derive2 { name="canine2.db"; version="3.2.3"; sha256="1gzd2x23dkfiwnwqz9pdn5lp4l8aby525mhscn3xakw633si4dvz"; depends=[AnnotationDbi org_Cf_eg_db]; }; canine2cdf = derive2 { name="canine2cdf"; version="2.18.0"; sha256="077cmmnhjdk0vxjzm1kqf3q5kgx6chwkm59dr4s5dy019rqb6sqr"; depends=[AnnotationDbi]; }; canine2probe = derive2 { name="canine2probe"; version="2.18.0"; sha256="1l849a1dqy4kpcsxs0lvb48ag81i0f0ys0w4757rw4kp8ry59z4b"; depends=[AnnotationDbi]; }; @@ -345,10 +358,10 @@ in with self; { celeganscdf = derive2 { name="celeganscdf"; version="2.18.0"; sha256="0a6w0a48azg0i21j3aqb7fnxck3ff9w3gsi89bnlfh0zx6pknx7p"; depends=[AnnotationDbi]; }; celegansprobe = derive2 { name="celegansprobe"; version="2.18.0"; sha256="05k7si3f8pzkyb8jv0r2vkavbrqxsn4nawl92gcphfsylrwcddqb"; depends=[AnnotationDbi]; }; chicken_db = derive2 { name="chicken.db"; version="3.2.3"; sha256="1rq9afkpcpv8qi75shvnsw8di3ycai4ylv7jq9zwj51zlwlw9cpq"; depends=[AnnotationDbi org_Gg_eg_db]; }; - chicken_db0 = derive2 { name="chicken.db0"; version="3.7.1"; sha256="0jib8pamnqzppk2x1i8c7szrwvhhilsxbk2x83ajzbzk3df3rvnd"; depends=[AnnotationDbi]; }; + chicken_db0 = derive2 { name="chicken.db0"; version="3.10.0"; sha256="0k4qwid7pf385l1q76hijmv79dwll1d84812l3hjcy40v7vn2x3k"; depends=[AnnotationDbi]; }; chickencdf = derive2 { name="chickencdf"; version="2.18.0"; sha256="09hhim5s9xj7n2b5rhn1svf5qly2mn0rr2v2ls25hfzyrqcbxlz1"; depends=[AnnotationDbi]; }; chickenprobe = derive2 { name="chickenprobe"; version="2.18.0"; sha256="1fdsiwfyg7fwslrr7xs3gny7sw24bzg5k1fvlyzb1477sgj0pid3"; depends=[AnnotationDbi]; }; - chimp_db0 = derive2 { name="chimp.db0"; version="3.7.1"; sha256="0bgn2yjj1jg0dswn5m4n78lydlzz7qb8fxpm8pl7909xrkcd1lpw"; depends=[AnnotationDbi]; }; + chimp_db0 = derive2 { name="chimp.db0"; version="3.10.0"; sha256="0yays3mn92k9b5ardq7bav9qd2v5pr6pm5zrsn0n26yqb585rhqv"; depends=[AnnotationDbi]; }; citruscdf = derive2 { name="citruscdf"; version="2.18.0"; sha256="1326mj1xf3k4v5iyyn46whx24qfng0x3cv6rvckdr1ycc1v887dn"; depends=[AnnotationDbi]; }; citrusprobe = derive2 { name="citrusprobe"; version="2.18.0"; sha256="0bf1wic136cxwgs4j13wsyqasnyvr0jw1hzg6qizndmy7g8hrb87"; depends=[AnnotationDbi]; }; clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.7.0"; sha256="039bsywnim0nr8b3w6vkj4m20j0pggnm6ajjz24bnlikm9zzrs6l"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -371,14 +384,14 @@ in with self; { ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.3"; sha256="07vc5fl2zq2f65ndcldyzvwfpl65snp6ygvw658j4036lbb7cpjl"; depends=[AnnotationDbi org_EcK12_eg_db]; }; ecoli2cdf = derive2 { name="ecoli2cdf"; version="2.18.0"; sha256="1rkxrwadq9kg9685z9pg6rgc4bblkx5p3c6snsl4gv2k188dva9r"; depends=[AnnotationDbi]; }; ecoli2probe = derive2 { name="ecoli2probe"; version="2.18.0"; sha256="11q4ka0ncjapahic49xdl9919vm9frrwlqgj101krgkg262lfm8n"; depends=[AnnotationDbi]; }; - ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.7.1"; sha256="075ngixclxh1qqgn5p1afxyx8610rfxj1ax3iqmbvqqlyq9nc9ar"; depends=[AnnotationDbi]; }; - ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.7.1"; sha256="1p3lvf92l44kqn47jhgwd6nqnjl0ksnvmsj1052lrbalh5xl3rcd"; depends=[AnnotationDbi]; }; + ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.10.0"; sha256="1vhb7dlva48arf1rqgnyzv9zk34sy1r1j4fhd7j1gyyhzgikih1x"; depends=[AnnotationDbi]; }; + ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.10.0"; sha256="1zcfpra075yqycfghmdplqsrw6ywwmzpjph5cxh2l7kar4pmir3c"; depends=[AnnotationDbi]; }; ecoliasv2cdf = derive2 { name="ecoliasv2cdf"; version="2.18.0"; sha256="16i6has9qgmzakcy24racc1h9j331wndv5c87qp5r1zrai61zyav"; depends=[AnnotationDbi]; }; ecoliasv2probe = derive2 { name="ecoliasv2probe"; version="2.18.0"; sha256="1hfrnal170cdigc2fmnynb75jjsiq77p4x6ws9gah558hvx87nk3"; depends=[AnnotationDbi]; }; ecolicdf = derive2 { name="ecolicdf"; version="2.18.0"; sha256="18g5prjykn356k35m131ifn128k5mhij2x26balqav0azigzjqsn"; depends=[AnnotationDbi]; }; ecoliprobe = derive2 { name="ecoliprobe"; version="2.18.0"; sha256="17g5zxfzsak7a0w51irc0w1w2i5ngdkx9db6rhv1fyp8mfjgaphd"; depends=[AnnotationDbi]; }; fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.7.1"; sha256="19isa4x8js0pdb4k8a11bw3bzmzv6jc4jphzrvav7piqkvrgykzx"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - fly_db0 = derive2 { name="fly.db0"; version="3.7.1"; sha256="0l617pksrcgb96bm25qsxlyjz7jp7hqk1sfba516l2gd2rvbp7rs"; depends=[AnnotationDbi]; }; + fly_db0 = derive2 { name="fly.db0"; version="3.10.0"; sha256="02n01bc14igh5raffv3q7wlhc4g4jcqff5ai09jhvgrrcrn6nflc"; depends=[AnnotationDbi]; }; geneplast_data_string_v91 = derive2 { name="geneplast.data.string.v91"; version="0.99.6"; sha256="0mc26d0sgmpmfmqsqinqv5k6vhg0hlc8hsjkcnvf369yav224nq1"; depends=[]; }; genomewidesnp5Crlmm = derive2 { name="genomewidesnp5Crlmm"; version="1.0.6"; sha256="06dmwnjy3gb53y6nr02dmp22qzfl5d63wppazrabcqbzwimhnvp8"; depends=[]; }; genomewidesnp6Crlmm = derive2 { name="genomewidesnp6Crlmm"; version="1.0.7"; sha256="16qcxa32fmbdcv5dck0grsnqyfcqql7wpxa1l6andv9hrvabv2jx"; depends=[]; }; @@ -453,6 +466,7 @@ in with self; { hom_Mm_inp_db = derive2 { name="hom.Mm.inp.db"; version="3.1.2"; sha256="034b9wiis7w7zj3647s0fh1jspyfn654yf0lm5ymp65sww965cxh"; depends=[AnnotationDbi]; }; hom_Rn_inp_db = derive2 { name="hom.Rn.inp.db"; version="3.1.2"; sha256="02smfm88y72dgmj2kna9v7sbcg5dxr8b4sqgy6i8b3zw3a6776yp"; depends=[AnnotationDbi]; }; hom_Sc_inp_db = derive2 { name="hom.Sc.inp.db"; version="3.1.2"; sha256="0l9nly3k7jnf6g1qnwyw22ga1hdyjdvn3hrlway8pb9rv7279bil"; depends=[AnnotationDbi]; }; + hpAnnot = derive2 { name="hpAnnot"; version="1.0.1"; sha256="16isg9byqc9ghipg7626mrijcs0bngz6n6hxz3m616v21cjyingj"; depends=[]; }; hs25kresogen_db = derive2 { name="hs25kresogen.db"; version="2.5.0"; sha256="1yp25ifm3bwzkzm8vimlxw5slini7drhvmh5ggh0z80sfrjyndyf"; depends=[AnnotationDbi org_Hs_eg_db]; }; hspeccdf = derive2 { name="hspeccdf"; version="0.99.1"; sha256="07azl9zpg552ic7li14p6n09ba3jbqqclwffjfpd2vc249x0n4fw"; depends=[AnnotationDbi]; }; hta20probeset_db = derive2 { name="hta20probeset.db"; version="8.7.0"; sha256="12m58w0av2b806w75df7spg72d0v7mr7vlhsgdc9h221r0g06vgx"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -509,7 +523,7 @@ in with self; { hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.7.0"; sha256="0ba3yvizj9ya61rr9ik2hdxhy0q67908x16n58jjjfq8wf96h7sp"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.7.0"; sha256="0chkxxpfl696qqiai3i30ylpsihyicbs0hbcni6nmnhfz9k5800g"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.7.0"; sha256="0wk2lg74zkgxh6frmikhk4bxndiyvc1j7mhvz65w8fxfqiwfyf5i"; depends=[AnnotationDbi org_Hs_eg_db]; }; - human_db0 = derive2 { name="human.db0"; version="3.7.1"; sha256="1vikw70n828prccs1vlnw3f4rwp5lsp5cb02f56hih4n3mapky9f"; depends=[AnnotationDbi]; }; + human_db0 = derive2 { name="human.db0"; version="3.10.0"; sha256="0wmp5rr41bdn2p9lna82sdfd0fy55l2c3i7ljijchsp1kb5hnlah"; depends=[AnnotationDbi]; }; human1mduov3bCrlmm = derive2 { name="human1mduov3bCrlmm"; version="1.0.4"; sha256="1p7qpzk6svafgdafljhh4k0z7pcs78qmwwfd80r0a1yhkssmp0v9"; depends=[]; }; human1mv1cCrlmm = derive2 { name="human1mv1cCrlmm"; version="1.0.3"; sha256="1qlph3qrjv52ddzlj8pwa93zzh70x4mbdrdr7q9pan427lpck9gx"; depends=[]; }; human370quadv3cCrlmm = derive2 { name="human370quadv3cCrlmm"; version="1.0.3"; sha256="1chjx9vsmqz2whslw1l7jn7nfn7zx6pcjfmqqm9mh81i74rzrdik"; depends=[]; }; @@ -547,7 +561,7 @@ in with self; { m20kcod_db = derive2 { name="m20kcod.db"; version="3.4.0"; sha256="1p2sm5j4b50iqzwcb984qrh74c3hf6yml7b8mvxlhhhvxz4iy1np"; depends=[AnnotationDbi org_Mm_eg_db]; }; maizecdf = derive2 { name="maizecdf"; version="2.18.0"; sha256="0yfz5gjhsq4wz6j63s1b1hxjz03gsmrlfs2cdc8smq6azp3zdid4"; depends=[AnnotationDbi]; }; maizeprobe = derive2 { name="maizeprobe"; version="2.18.0"; sha256="01h5dv5i0zaqlphkii9ipxy9wswv1srgprrpr5vmi01c9d98qsk0"; depends=[AnnotationDbi]; }; - malaria_db0 = derive2 { name="malaria.db0"; version="3.7.1"; sha256="1ljk5xfshp96pibw9k1yb5cl664iashb9rhc1y1bjalyidraznk7"; depends=[AnnotationDbi]; }; + malaria_db0 = derive2 { name="malaria.db0"; version="3.10.0"; sha256="12s4gyh0w0dsj47yxx1irm91ap4jgq8pgk57py1jwi8mnanjsk96"; depends=[AnnotationDbi]; }; medicagocdf = derive2 { name="medicagocdf"; version="2.18.0"; sha256="1clz679cc887x98c6jk93cphijkbg5r2nd9idrj5901yvh6p9n5q"; depends=[AnnotationDbi]; }; medicagoprobe = derive2 { name="medicagoprobe"; version="2.18.0"; sha256="0w6j1pfkvb3npc8srpjifq2ywnqxhc9q090jqzmkx22x36cw9cl5"; depends=[AnnotationDbi]; }; mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.3"; sha256="0xd2gbvry061409kiwq99i13641g8x6m9kbgg4yr0x6m9dh7hxa8"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -601,7 +615,7 @@ in with self; { mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.7.0"; sha256="1s7cdjglrc9qqf3gsmhsyycfa0h5qrbk28i4z3z4mb9g6242r1r4"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.7.0"; sha256="0l8y2zbhykzqs9hbjhj1cys1mzdjhmi4rjv4l3v0sv5969h6sl96"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.7.0"; sha256="1mkw3997mqr7ssa60zpwhlyajda51smcrnlnxwif78g99yj0nrxb"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mouse_db0 = derive2 { name="mouse.db0"; version="3.7.1"; sha256="1fyawqxf1m6cnl6p41q1bqb75k59n8ixn3kw8gf4kq34cldl0h9k"; depends=[AnnotationDbi]; }; + mouse_db0 = derive2 { name="mouse.db0"; version="3.10.0"; sha256="12780ydznzh1l5vdd6q92zaz7m27cb05giwm91x9ig9d1ilh6hhd"; depends=[AnnotationDbi]; }; mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.3"; sha256="1wdgqawqzkr39xwl32cap4ksr59p7r7i83g82h1ss4q3lm58gxpm"; depends=[AnnotationDbi org_Mm_eg_db]; }; mouse4302cdf = derive2 { name="mouse4302cdf"; version="2.18.0"; sha256="1mpyma4x8zfs2fmmx57xw4cfs2cf9lhw71nc3icl72d7vmwidswc"; depends=[AnnotationDbi]; }; mouse4302frmavecs = derive2 { name="mouse4302frmavecs"; version="1.5.0"; sha256="04clwkfz1gqqwrnqbavkka3hv480w6vi6c4q947qqnhw8j5jjp7s"; depends=[]; }; @@ -638,25 +652,26 @@ in with self; { nugomm1a520177cdf = derive2 { name="nugomm1a520177cdf"; version="3.4.0"; sha256="0skd5b76si0vydzk5qhg4f1a1j655alxflm9sqci8fi8safwj96a"; depends=[AnnotationDbi]; }; nugomm1a520177probe = derive2 { name="nugomm1a520177probe"; version="3.4.0"; sha256="1n70k0mhv146983myjgk1cgkr9rmmcpqdv8wpkcr320qcvgf9bn7"; depends=[AnnotationDbi]; }; oligoData = derive2 { name="oligoData"; version="1.8.0"; sha256="1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y"; depends=[oligo]; }; - org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.7.0"; sha256="101xvx62y1y2kbiv9j427879zhjindm1hzb9iscinmf10lwhyj8q"; depends=[AnnotationDbi]; }; - org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.7.0"; sha256="0i5dv4lc8dh27ipf37wk84y75fmnbja0bbllzbchb459c9bpwcf9"; depends=[AnnotationDbi]; }; - org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.7.0"; sha256="0vdfgh2yrawz8bbszgxl5vvq6iqvn25p5l01j7zhlmx035jcbfak"; depends=[AnnotationDbi]; }; - org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.7.0"; sha256="1w5br1ss4ha8wv4v2saj7cmbjc2jw0dyj2f2y269l078z31wcnaz"; depends=[AnnotationDbi]; }; - org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.7.0"; sha256="1y3kda375f327bv31cfp470546hvcdw5a8bl3z5h1dm6c556z7cl"; depends=[AnnotationDbi]; }; - org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.7.0"; sha256="1pqjrzlyg72bjpy8zsxvaglc7jsv176bnyi87xdajmkvsgxpm7b3"; depends=[AnnotationDbi]; }; - org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.7.0"; sha256="1xs5wsbcpy0iwbjyiv7fax57djqc529ai5fk1qfsdcvlja3cpglx"; depends=[AnnotationDbi]; }; - org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.7.0"; sha256="0ii3k9b0rr6bkb16m108if9liinw7md4mgh8fz4yd4gh8a7zcli7"; depends=[AnnotationDbi]; }; - org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.7.0"; sha256="1zcqbr4sds24mcggg71g4j6v0wp7fri75d1l0bhp0x245b9k5vnw"; depends=[AnnotationDbi]; }; - org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.7.0"; sha256="0lyzznrnyyw9lsdp58a0sc5jw2lrccsv44dvrza2ix8mx46gplis"; depends=[AnnotationDbi]; }; - org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.7.0"; sha256="1qxz9l80yg3qdqszs6dsscp7lrpfi1bgd0pxh9j7q34vprzwhdim"; depends=[AnnotationDbi]; }; - org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.7.0"; sha256="1i3nvrd3wjigf1rmgxq1p5xxc3p8v02h5gwi62s30rkrsyjjfjxx"; depends=[AnnotationDbi]; }; - org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.7.0"; sha256="1c6mwknyf8cq824qm3cax0a2l3wd2h9dw6pylhwm0x7viz2xf2iz"; depends=[AnnotationDbi]; }; - org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.7.0"; sha256="0s3ibaqvjw3sg1j22pfgzw1gcb9pv9b8a4livj9ph73jqhx03r5i"; depends=[AnnotationDbi]; }; - org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.7.0"; sha256="1n9qd34gjkjgbbz07h6ibzgbq9id81z6ni01vmaki3554gmfk3dl"; depends=[AnnotationDbi]; }; - org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.7.0"; sha256="10293py12jar1ab3s1b872c5gxpw9d2d5sxk4iq5g38i0gcf5gsc"; depends=[AnnotationDbi]; }; - org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.7.0"; sha256="0dwaw9v4c1d5wr6skaf97s013wqwqm31bybhggm1fm59aa6mkdwv"; depends=[AnnotationDbi]; }; - org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.7.0"; sha256="1s5zizma3ba00z8q1k9h4fajxwj3f2jg1034rfwqlhsscwrhv5ih"; depends=[AnnotationDbi]; }; - org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.7.0"; sha256="002i6aacrirvyzi14r26fgr6cqc0bfwn0wg83sbligp2dwqm0bb4"; depends=[AnnotationDbi]; }; + org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.10.0"; sha256="1hq037fbz2rgk2wisk9bky3gl5axicfrq9sk65bfnagr29x2hyr4"; depends=[AnnotationDbi]; }; + org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.10.0"; sha256="1lkicfq5k1924kn0l00qya358zshmw41zijzxiiaj51ilg84qlhh"; depends=[AnnotationDbi]; }; + org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.10.0"; sha256="0yaipiqrbnhd501b50icgig74a2943c40gpvfivs2jj33b1fwys8"; depends=[AnnotationDbi]; }; + org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.10.1"; sha256="0ixzdinb97ffhfsfrnyazb44n5082f0lhxb0zl6igabbnyl0fpm7"; depends=[AnnotationDbi]; }; + org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.10.0"; sha256="1hvg6xqzb4jkgf9647bphwm0yjjb7kkmryf5c70xp1m1x793dh00"; depends=[AnnotationDbi]; }; + org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.10.0"; sha256="1w9yxz3jcmq8dwi7xd0sqdvqp7vq4jp982nrdp5rsfxrjsmwypng"; depends=[AnnotationDbi]; }; + org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.10.0"; sha256="0j269mvdhsn6gj5g6gygi35cb3a8mlddn70bsk0hdsilyzfi0gyz"; depends=[AnnotationDbi]; }; + org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.10.0"; sha256="1bp3pbc2f4rknnzqwnj37l7ylmkld4gf6951v92dnbz2k9w5cmrz"; depends=[AnnotationDbi]; }; + org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.10.0"; sha256="09zxzr8l35wxrki9fn6w2sd58igvwws6naskkcqjymjcqzdqi21z"; depends=[AnnotationDbi]; }; + org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.10.0"; sha256="1gd2y2ggarj051wspf0gfmb2asa1q0xhxwswgy84iszfh8j8xr1h"; depends=[AnnotationDbi]; }; + org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.10.0"; sha256="1v3g2i5xvf2pmrirvhdm86z5298idcm2bgy50d16lqmpcnharj44"; depends=[AnnotationDbi]; }; + org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.10.0"; sha256="17s75fvwspbps4875wf7yv4snbls64z087l3rv6vj6m3g3jrsl34"; depends=[AnnotationDbi]; }; + org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.10.0"; sha256="16fkfqnq2g6l6li1nryv0nk0k2ifgwxj0ls7fcwnwn6q6x9k0naj"; depends=[AnnotationDbi]; }; + org_Mxanthus_db = derive2 { name="org.Mxanthus.db"; version="1.0.27"; sha256="1jqwsdjz1d8fwqhq26lavb2kq739ddlb8khsh4b096vhnwv3dxg5"; depends=[AnnotationDbi AnnotationHub BiocFileCache BiocStyle]; }; + org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.10.0"; sha256="0h434vpyrm2br2c8ahmswgw41ml9d6mq9sd6lga32kvk49wpapvc"; depends=[AnnotationDbi]; }; + org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.10.0"; sha256="0ibn8x8vywv1p8m36604jm4ibfvkplb6qwris91igms2d3fx6khb"; depends=[AnnotationDbi]; }; + org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.10.0"; sha256="11hwpz907300qc78f013kjrxm053qx6fxjc7m9qwx1rhlyar8049"; depends=[AnnotationDbi]; }; + org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.10.0"; sha256="1jkbbhrazg4zvxfshsm1m0i4fmajc52dnbz9w4rwxv691n30b08j"; depends=[AnnotationDbi]; }; + org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.10.0"; sha256="1yg6am15d38qxmwpvxxl077lna426hsv3hsx3gv0ykgywk9j061q"; depends=[AnnotationDbi]; }; + org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.10.0"; sha256="1m8zsfqqr3d5972257yr99kzp7wl13lyzdfgi22gyjjhdcpff552"; depends=[AnnotationDbi]; }; paeg1acdf = derive2 { name="paeg1acdf"; version="2.18.0"; sha256="127pgxxp5wp3hgmafbzdzsk4gqnllq1m1gcsfyzkvpkvmbn4aa9n"; depends=[AnnotationDbi]; }; paeg1aprobe = derive2 { name="paeg1aprobe"; version="2.18.0"; sha256="0hbyd402wf9nzy2g93nhnf2zsi9jvhgfk0llxlyfk0kqxs0y4byy"; depends=[AnnotationDbi]; }; pd_081229_hg18_promoter_medip_hx1 = derive2 { name="pd.081229.hg18.promoter.medip.hx1"; version="0.99.4"; sha256="1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite]; }; @@ -833,7 +848,7 @@ in with self; { phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.7.2"; sha256="1jmc4k4zgkx5vr2plnidnd9bidlwlb0kr7mjg60cqjw7dq7jl1fa"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.7.1"; sha256="0dka39rvx4d3wbcjypcgvc19s6cnxkkfywa4irv23kpibq1sjyv0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.7.1"; sha256="105isdrb3nsy30wd8yy9vrrv8b7c8izc11xqqixg6rcriacd0rl0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - pig_db0 = derive2 { name="pig.db0"; version="3.7.1"; sha256="06hwggby003y64mhrk4b48zxnh3csqi5hm9y42iccz17qs7j1jmi"; depends=[AnnotationDbi]; }; + pig_db0 = derive2 { name="pig.db0"; version="3.10.0"; sha256="1nc6sy09g3lvka71ph6h6imf4xmffklz8n7i9c80525a79jhxh4d"; depends=[AnnotationDbi]; }; plasmodiumanophelescdf = derive2 { name="plasmodiumanophelescdf"; version="2.18.0"; sha256="1vs36091djinn3g6rjhmy9xfdyi58365zbcjc9mf50adnp2i5fq9"; depends=[AnnotationDbi]; }; plasmodiumanophelesprobe = derive2 { name="plasmodiumanophelesprobe"; version="2.18.0"; sha256="03hfq51nrpmx8ihc48jiih6bk99irrgal9x7i7mgcv8xd508gcsy"; depends=[AnnotationDbi]; }; poplarcdf = derive2 { name="poplarcdf"; version="2.18.0"; sha256="0j28czs936j2wgwp63qbwl1mjcflcrx7ir88jzxkkw7411ch1gl1"; depends=[AnnotationDbi]; }; @@ -862,14 +877,15 @@ in with self; { ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.7.0"; sha256="135cgn92raa6f9yiw4k25rn04rpg5mdnf969l66x4s1jcc0rwscq"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.7.0"; sha256="0lp4prymrm3cp8yq1hba9bylw22hcvlx7piqpvjx51hj79yrwdig"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.7.0"; sha256="1b7s2r4w1yy2v3srs6n931zc64qf58nq4apmq2ag5nx50wspima1"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rat_db0 = derive2 { name="rat.db0"; version="3.7.1"; sha256="1k7vx0iihb5sgaicrxbv33fi7kjwqfskbwn37aj769nqxq66fx8h"; depends=[AnnotationDbi]; }; + rat_db0 = derive2 { name="rat.db0"; version="3.10.0"; sha256="0sj65idfspzc6crzhqmys5jk3zyx2hx3lkrggy4cn0giip5c9lvd"; depends=[AnnotationDbi]; }; rat2302_db = derive2 { name="rat2302.db"; version="3.2.3"; sha256="0vj4vkx091m34xqjh6gv6m2iqszvn5rq3kvnpyq3fin5v42wrsr1"; depends=[AnnotationDbi org_Rn_eg_db]; }; rat2302cdf = derive2 { name="rat2302cdf"; version="2.18.0"; sha256="1748rc6yypd7y8wgr1qg632pcsxx0fkxjz6b3z4fhblgdllhy9wk"; depends=[AnnotationDbi]; }; + rat2302frmavecs = derive2 { name="rat2302frmavecs"; version="0.99.11"; sha256="0qy5hf86lrkn20yg6d46kcw9fjc0qhsbzbyavaj1v2zl34xvr1ii"; depends=[affy frma]; }; rat2302probe = derive2 { name="rat2302probe"; version="2.18.0"; sha256="1zwjgbcb9d4ib6z1iyjz8x11lq0b5gqs08y6j3idb5wf3i2p521v"; depends=[AnnotationDbi]; }; ratCHRLOC = derive2 { name="ratCHRLOC"; version="2.1.6"; sha256="0mgk6lwvvdwjzjh4r1q1q6nfnx4vqx9iy6gmbrb9f31jf30hqnsb"; depends=[]; }; rattoxfxcdf = derive2 { name="rattoxfxcdf"; version="2.18.0"; sha256="0q84lfaxnnj2zbm5q8xswa1md15fjj4i0djnqr835ixzn7px4yqn"; depends=[AnnotationDbi]; }; rattoxfxprobe = derive2 { name="rattoxfxprobe"; version="2.18.0"; sha256="1kp159553rkcn9yh6x3yph3yjz2ja21wi9j5ax03qnhwlsl1x8ik"; depends=[AnnotationDbi]; }; - reactome_db = derive2 { name="reactome.db"; version="1.66.0"; sha256="18kh68sx9825bi92904xcygjh9jsbxyhsp4ghw1wh160na65gy3v"; depends=[AnnotationDbi]; }; + reactome_db = derive2 { name="reactome.db"; version="1.70.0"; sha256="05wc4fp0faq6h3kq5rwafnips043as31yq11mrjngfxvf5i10srg"; depends=[AnnotationDbi]; }; rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.3"; sha256="1s2sd5bqlj4qhamhrnb9byxn8nc7z265mqy7zzkgxcd6a2k472vp"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34acdf = derive2 { name="rgu34acdf"; version="2.18.0"; sha256="08z9f16xp1m2mwl9vlmbffxl4zyyl8cgzf6wp66rrm32lvl0nbwq"; depends=[AnnotationDbi]; }; rgu34aprobe = derive2 { name="rgu34aprobe"; version="2.18.0"; sha256="1gjxyq9128jgv3ic386f84rajgf3wz7yi2dja80y0ff4m0a48dlh"; depends=[AnnotationDbi]; }; @@ -883,7 +899,7 @@ in with self; { rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.3"; sha256="0lq8k95qm0q7j65nf16p3f09dn9zs87n3k561wxrgi2lb0pf6j40"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.3"; sha256="0zlcn9spw23bj3px9z1l2f5afn09zbr6rv0nbd2h6dd12wrvy1zk"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.3"; sha256="1r272jf9cflf1yf4bznp4d59h7bd7adh1i3rf890h5ffc0xzf5cq"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rhesus_db0 = derive2 { name="rhesus.db0"; version="3.7.1"; sha256="1k695lwbwznk4i03dqpfyk0nx4s9n1qlgh9ccfxjy591lraj7b4j"; depends=[AnnotationDbi]; }; + rhesus_db0 = derive2 { name="rhesus.db0"; version="3.10.0"; sha256="0ddrjv0xcz8c9kcp6gkqbsvfkvsn9cf5caggr5wlrvigl662fvgi"; depends=[AnnotationDbi]; }; rhesuscdf = derive2 { name="rhesuscdf"; version="2.18.0"; sha256="0q2alkxm80wkzaf0q80df27q30qkswybavz05x6ywsihbs9h0nb8"; depends=[AnnotationDbi]; }; rhesusprobe = derive2 { name="rhesusprobe"; version="2.18.0"; sha256="0fd8pvwvpcmx41k80nbccjxllh39fvjf7l9dr8facisl1x7gsfil"; depends=[AnnotationDbi]; }; ri16cod_db = derive2 { name="ri16cod.db"; version="3.4.0"; sha256="1xz533vxjdyxx1wkks0kgk6b90sxs44iqcsvyds0xcm573bx8c6q"; depends=[AnnotationDbi org_Rn_eg_db]; }; @@ -922,8 +938,8 @@ in with self; { vitisviniferaprobe = derive2 { name="vitisviniferaprobe"; version="2.18.0"; sha256="1ggz1s37dwvrkhj4vx2civyhap7bgqsshy33lk14z4fjsayfi39a"; depends=[AnnotationDbi]; }; wheatcdf = derive2 { name="wheatcdf"; version="2.18.0"; sha256="1gmbrdilqvm54h6nkb1cm01ki8aipiywd4qj8gpwlm2hqrimr8kr"; depends=[AnnotationDbi]; }; wheatprobe = derive2 { name="wheatprobe"; version="2.18.0"; sha256="1fifi3pvzdrg356idwz0kx7qlf5mssdxlyvwpn3cjgw0z7n7cnw8"; depends=[AnnotationDbi]; }; - worm_db0 = derive2 { name="worm.db0"; version="3.7.1"; sha256="0p5rzmkars7kl4y4mlq6jbmgp1mdfw3jcnvhl50dnpqc7h28y4xf"; depends=[AnnotationDbi]; }; - xenopus_db0 = derive2 { name="xenopus.db0"; version="3.7.1"; sha256="067vs7b2slmragqqnfpgy6m187cz1rx9r5agizrjycndzdzkpy3k"; depends=[AnnotationDbi]; }; + worm_db0 = derive2 { name="worm.db0"; version="3.10.1"; sha256="0chpahw95y05kvwkf5rvy0plfs7id40mly4i8fkm8wz9ikmc1jci"; depends=[AnnotationDbi]; }; + xenopus_db0 = derive2 { name="xenopus.db0"; version="3.10.0"; sha256="1vgmbbax4dc7fmd610zjmm4v26q04na0f5zd363kfbi5ilj050fr"; depends=[AnnotationDbi]; }; xenopuslaeviscdf = derive2 { name="xenopuslaeviscdf"; version="2.18.0"; sha256="1bcz1hr7gxw6ac4qvw0giph6hfcf5i9b11s274ypq512qc1d32iq"; depends=[AnnotationDbi]; }; xenopuslaevisprobe = derive2 { name="xenopuslaevisprobe"; version="2.18.0"; sha256="0prb14zn2gvgxq8w0y21x1ng51cn3bgjhkppf7zkmnq1xkzvq0pw"; depends=[AnnotationDbi]; }; xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.3"; sha256="0cdi71c8pflb8n4yfxc0wmfi51w6z0dlz7nw5hv0hkx547v79d53"; depends=[AnnotationDbi org_Xl_eg_db]; }; @@ -935,7 +951,7 @@ in with self; { ye6100subbcdf = derive2 { name="ye6100subbcdf"; version="2.18.0"; sha256="1169hv56981b915rlr5w5sn6ppyjd8as7f4k1hbjzadrdrl3glwp"; depends=[AnnotationDbi]; }; ye6100subccdf = derive2 { name="ye6100subccdf"; version="2.18.0"; sha256="0mhr4zd33gfvvivc17k7fb6nvmhq6h3q0xbx2zl09zd6qk09kizm"; depends=[AnnotationDbi]; }; ye6100subdcdf = derive2 { name="ye6100subdcdf"; version="2.18.0"; sha256="11b1fflgc34lrj4yf1p7way5n83cm9c7znsbxpzlwddwyy8qib30"; depends=[AnnotationDbi]; }; - yeast_db0 = derive2 { name="yeast.db0"; version="3.7.1"; sha256="1shjbflvlxipiyapwd6jpqs9mp8nyr3j63wcpnaznmxv0z5k0fw8"; depends=[AnnotationDbi]; }; + yeast_db0 = derive2 { name="yeast.db0"; version="3.10.1"; sha256="1iw5514n1k3gzqyywz99mljply5nz11fmpjv8rsjlq5mj6rc2sa3"; depends=[AnnotationDbi]; }; yeast2_db = derive2 { name="yeast2.db"; version="3.2.3"; sha256="1xns0129ifklipbardybkjyxfwnlklavq0k6s15wk2iwk7vxa33s"; depends=[AnnotationDbi org_Sc_sgd_db]; }; yeast2cdf = derive2 { name="yeast2cdf"; version="2.18.0"; sha256="0c68val9x8bfnv4xx0vag9dxwsx5q8dzbj0dpha3nshh12jw48w9"; depends=[AnnotationDbi]; }; yeast2probe = derive2 { name="yeast2probe"; version="2.18.0"; sha256="125nif693qcmxc0nnnz917f9avggcdr8g9rfvx2qdc54a2l7vdb7"; depends=[AnnotationDbi]; }; @@ -944,7 +960,7 @@ in with self; { ygs98frmavecs = derive2 { name="ygs98frmavecs"; version="1.3.0"; sha256="1xrm1209xnknwvad7nvg1a0mbxz15z12yd4x5bia3cq03zcmzf9m"; depends=[]; }; ygs98probe = derive2 { name="ygs98probe"; version="2.18.0"; sha256="0awf6z4j2vb2jk9a9j2r512yd3m31660y68pasa9mp488m270a3q"; depends=[AnnotationDbi]; }; zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.3"; sha256="1n6p04hlm5c32fnficx294s7n7izy5460avagw8hx1g5xryhdzqk"; depends=[AnnotationDbi org_Dr_eg_db]; }; - zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.7.1"; sha256="1x9s6sxxgijjnrvg4fggnqhv10zwsfw6hy1qa93rjmpgqpr7ad20"; depends=[AnnotationDbi]; }; + zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.10.0"; sha256="1q3wsns5dqjidqbn7hvhxqqyyrl3y8bfbfmalqdmbqjgnkr7rrs9"; depends=[AnnotationDbi]; }; zebrafishcdf = derive2 { name="zebrafishcdf"; version="2.18.0"; sha256="0sq1xqhblbilvaiabhqyl9gxdj3jg576vgq8v0cls1zvvx0isrx0"; depends=[AnnotationDbi]; }; zebrafishprobe = derive2 { name="zebrafishprobe"; version="2.18.0"; sha256="1pb8z2rdhq11hq391xyi236scyafbp56kbhhwsnha36yygz5drw0"; depends=[AnnotationDbi]; }; } diff --git a/pkgs/development/r-modules/bioc-experiment-packages.nix b/pkgs/development/r-modules/bioc-experiment-packages.nix index 04f4d25def24b..2977276e90f08 100644 --- a/pkgs/development/r-modules/bioc-experiment-packages.nix +++ b/pkgs/development/r-modules/bioc-experiment-packages.nix @@ -4,363 +4,391 @@ # Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.8"; }; +let derive2 = derive { biocVersion = "3.10"; }; in with self; { - ABAData = derive2 { name="ABAData"; version="1.11.0"; sha256="0ihr0av55kfg36igb1dn5q132q4gnyaf041xqi4rw7n67525qdap"; depends=[]; }; - ALL = derive2 { name="ALL"; version="1.23.0"; sha256="1m3bx001qngwx0h64kv187q7bsxm22prfm1npbjrfzhg4vjn8rnf"; depends=[Biobase]; }; - ALLMLL = derive2 { name="ALLMLL"; version="1.21.0"; sha256="14pwfwndrapk1h824hw6dyxlkicxqylx56kky9zg8q0qfm5w1ygf"; depends=[affy]; }; - ARRmData = derive2 { name="ARRmData"; version="1.17.0"; sha256="1y6lld8ijxw2g1qxs1bzvjppwfax6yv1ww18axn9553ibjznis7b"; depends=[]; }; - ASICSdata = derive2 { name="ASICSdata"; version="1.1.0"; sha256="050ihbi20chjd5gvyf5jcmjhb1kvdvz80nh5aw1yp8ydfgdnqqwg"; depends=[]; }; - Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.17.0"; sha256="1zcai5p4vgpmdv4zdnrqkdszg6wiq6ajj4vbas4hcyp5yglfby3h"; depends=[]; }; - Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.15.0"; sha256="144wb8sniifglqdryfvpnxx7hv1v2c6djqzbk4mq4lkrp64a251n"; depends=[]; }; - Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.19.0"; sha256="0glp22hqblylqc9n8jcx19k2p7ld9ykdnvqgr7nbipsvm4zgnkn1"; depends=[]; }; - AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.19.0"; sha256="0nf3260aqz4831q8i83nqlcf5hq9b988ly5rhrwyb8mv2ncs0z9k"; depends=[]; }; - Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.19.0"; sha256="05w1w7fqvhf2xi2d0d5rzigv3sriwy5jxak7j8bvmbwnx31inv5k"; depends=[]; }; - AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.21.0"; sha256="1k1qzxakbavm10bd0ybs1gk97w1y825iqvwimn0cr128qw2xxkyj"; depends=[affy]; }; - AneuFinderData = derive2 { name="AneuFinderData"; version="1.9.0"; sha256="0m3pvsdd2y1947zl582791bsip95j41fc6g9gbin3cg51y7lb6xr"; depends=[]; }; - AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.11.0"; sha256="08r5430gqsmkbh4n49ac2fl0m24zmqjnc9yxppw5mr0d4n5l26y5"; depends=[]; }; - AssessORFData = derive2 { name="AssessORFData"; version="0.99.2"; sha256="0yi2vxzg21nkqlywcpv6n2vzksl77cvkc42ii9p7gy9kpv56553k"; depends=[DECIPHER]; }; - BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.19.1"; sha256="08c7aqnh4wnhnalrvchcyhy5vmxq5xkq26pmp9xjn2x4zwf4156y"; depends=[beadarray GEOquery limma]; }; - BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.1.4"; sha256="1hh1l134cmbcmyc40fwfrwrbx6qyiv9a3bz8hp9vbdf1vslhcnpk"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; }; - CCl4 = derive2 { name="CCl4"; version="1.19.0"; sha256="1j4q7mm4lwi3rcf0y6zj36xc6n7c8y6l8iv9ac4avbgvr1rvlxaq"; depends=[Biobase limma]; }; - CLL = derive2 { name="CLL"; version="1.21.0"; sha256="103lmn87zw73sx30ln6g4382ydpi97b1zsm7www8bwlnw6zx7k7g"; depends=[affy Biobase]; }; - CLLmethylation = derive2 { name="CLLmethylation"; version="1.1.1"; sha256="1vbvxb3bnwx4ngxkk6vrhshcfyrv0fvs3vhlqk0j9q1mhxg8p3a9"; depends=[ExperimentHub SummarizedExperiment]; }; - COHCAPanno = derive2 { name="COHCAPanno"; version="1.17.0"; sha256="199xz5qwp06kr3smr25vx2w25hmzf7qbpaw18aj7bvccsdsyvky9"; depends=[]; }; - CONFESSdata = derive2 { name="CONFESSdata"; version="1.9.0"; sha256="091ydgxqldrcr3b73pqyk6555yyclnnr4yizi0kknqasx33sb802"; depends=[]; }; - COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.17.0"; sha256="1pgfqrp6cx94marm96swqq8c9nr00xdmlf62hvmacqwspsajbnya"; depends=[]; }; - COSMIC_67 = derive2 { name="COSMIC.67"; version="1.17.0"; sha256="0qd0xbc8hy25hyy8bilim2w5inhwz88rypbqc8vjlg54r2yl12nh"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; - CRCL18 = derive2 { name="CRCL18"; version="1.1.0"; sha256="1hxh7fldfy2v9sii5clwi9i568dcc742nd4da0048p4pm87qxcsv"; depends=[Biobase]; }; - CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.13.0"; sha256="1rjp3ybc0yx8sjqp4ahadgymlld2l2hn3dxxvpng06qpp5jch0zq"; depends=[Cardinal]; }; - CellMapperData = derive2 { name="CellMapperData"; version="1.7.0"; sha256="0zjssdm2z7i6bcp781x9lz09dmh5krvvxg5a0la79dj5vvs72cjp"; depends=[CellMapper ExperimentHub]; }; - ChAMPdata = derive2 { name="ChAMPdata"; version="2.13.0"; sha256="1xa5lcxf7npb8mykqpx84vpjavl9xzwl24nlsaaw3gk75cfrhpkx"; depends=[BiocGenerics GenomicRanges]; }; - ChIC_data = derive2 { name="ChIC.data"; version="1.1.4"; sha256="0s8nm65kwk2cbs8g66zc46q31nd66fdm0kk0d6gxl6zhv0p3d8dv"; depends=[caret]; }; - ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.19.0"; sha256="1f32hzqgpiclby25223ksp63xlhdk7d52sf2xc97hpjig0571630"; depends=[bigmemory]; }; - ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.5.0"; sha256="0y2s4hw7hbfspy1hjsqkaw72pm26k911699k6sw4jhvjh7mkvjbf"; depends=[]; }; - ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.19.0"; sha256="1i2aj1vxak6b53mpcd36q2xwgpddllqpqz3wii7rrsa9mg2gaaza"; depends=[affy hexbin limma qvalue statmod]; }; - ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.17.0"; sha256="1zz0vq192jfnp494mp61xmkxyd94bbh9xs268jd7ynnlpjp9phsx"; depends=[]; }; - CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="0.99.14"; sha256="1lvdacdazpp071grc75gjxmhwjzkm22lhwzjvf6baclq9qfjgqp2"; depends=[ExperimentHub Rdpack]; }; - CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.13.1"; sha256="014jissvpkj2d0sz3r1dr5c5qs29hbvs9jvm8bl86mld8ff3nlkc"; depends=[]; }; - DAPARdata = derive2 { name="DAPARdata"; version="1.11.4"; sha256="06qwja8qkbix6ial81yv1q3bxrdmqrgridina094p1xrxbfrn5sb"; depends=[knitr MSnbase]; }; - DLBCL = derive2 { name="DLBCL"; version="1.21.0"; sha256="0advvjkd6skynjjnz4s9mdnh0l9l2zhn4n9x0kg23dmsg4r8vqm7"; depends=[Biobase]; }; - DMRcatedata = derive2 { name="DMRcatedata"; version="1.17.0"; sha256="1a669jjvkjjklbh2kxrv3y2clfps067w6w19y1yr2a8wc7crbl4a"; depends=[GenomicRanges]; }; - DREAM4 = derive2 { name="DREAM4"; version="1.17.0"; sha256="0s3y3wgg487p5fswbin4237mrm9kzbq12a84jiixhql1j2ysbhcs"; depends=[SummarizedExperiment]; }; - DeSousa2013 = derive2 { name="DeSousa2013"; version="1.17.2"; sha256="1xz1l83my34kwr4wk6vq3q5yzd3i0ky5qm44wx65f4d92hn7k3v5"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; - DmelSGI = derive2 { name="DmelSGI"; version="1.13.1"; sha256="0v25rb5myhki1vvmmzyhpa8n0vv623zj6lh26a10iq4i5bvda9c5"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; - DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.19.1"; sha256="1sbhq0m67v5swyafrn74cjz4h3r6d1qmn2skkz3xwjgm70qpbjrb"; depends=[EBImage]; }; - DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.17.0"; sha256="05xykgmiakw6n8f1b86wbyjzs9v6b7qz8119pwvbfjgncgwqmcx9"; depends=[]; }; - DuoClustering2018 = derive2 { name="DuoClustering2018"; version="0.99.2"; sha256="0f4ps36wd1yll9w4zkx6n4kz0svqfajmb11a5c51b55572siq203"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; }; - DvDdata = derive2 { name="DvDdata"; version="1.17.0"; sha256="0x5crrym68rw2r9nmb33j1n1f5rxpj5rzn8b5j403ikxywfwxblh"; depends=[]; }; - EGSEAdata = derive2 { name="EGSEAdata"; version="1.9.0"; sha256="1bmxm535h9ilnpbm196rf40543kh1yf5ldqxilhiyx5k0qaaihmz"; depends=[]; }; - ELMER_data = derive2 { name="ELMER.data"; version="2.5.5"; sha256="192jdmxl17m8s1r95c2lizh2r5zpazvx0az8xj22dva0mrazql9c"; depends=[GenomicRanges]; }; - EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.19.0"; sha256="0w3bcssqpbzgb03ld9j9jv57bvn8yfpkglhb4minbkqbhslv4j52"; depends=[GenomicRanges rtracklayer ShortRead]; }; - FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.17.0"; sha256="0iz0f467d2wh5cly3cf2y7kkrv8pwihsccf6zsdrqpq4a1ijiml7"; depends=[]; }; - FIs = derive2 { name="FIs"; version="1.9.0"; sha256="135r3vc8rdjrhl0a6s85052mzranlxd5jkiwxbymsjg6mglsjyvh"; depends=[]; }; - Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.17.0"; sha256="05kvsbr46yjpkdnn7rwxhj3wnlrgz92fgg35b8i781131vpy4lzh"; depends=[Biobase gplots limma VennDiagram]; }; - Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.17.0"; sha256="1rfsb49fcn127nzykwndzp7gapd36j3r01dvvhn87w6ryy9yc98c"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; - FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.19.0"; sha256="0ngh5zwikm83rzv9aykhxijf7nj345nnak2207jn4frdq8qahh3l"; depends=[minfi]; }; - FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="0.99.37"; sha256="1kfh6x69r3vc7v3in1q1n8frbsha5z8gmds7dcgy39wvry16c6lm"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; }; - FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.9.0"; sha256="1ib9g4zy3zwk7m6hl9ggi030qwrjch9jnip6d7a4b27cjzlf0sdq"; depends=[minfi]; }; - FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.7.0"; sha256="04i701nl8w8sdc85z1y8gzg076n3znnd9fkp35a7pq7sczkfih90"; depends=[minfi]; }; - FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.17.0"; sha256="1d9xq8ha0p1injk8l16vggfkzk7xlsgaqb227gvl6xc49q8dmh5m"; depends=[minfi]; }; - FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.17.0"; sha256="1vp55zd2ifamxm248jskvf2y29cgjyx98jw41h2pbly31qxq4h49"; depends=[IRanges rtracklayer]; }; - GGdata = derive2 { name="GGdata"; version="1.19.0"; sha256="0mr6l11bgg8ncga9ivwdps6jp6zbcjs5jxvcpf834qaj92h63mrg"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; - GIGSEAdata = derive2 { name="GIGSEAdata"; version="0.99.11"; sha256="1rn6dmji5ja1p83gai18bcmdc9vi0fm4pq4yk7wdsbv6p334cqlq"; depends=[]; }; - GSBenchMark = derive2 { name="GSBenchMark"; version="1.1.0"; sha256="1a9hlgcz9m36gzkmxkq4i308hsm617hmsxmwq09yd5cxq8dl80g4"; depends=[]; }; - GSE62944 = derive2 { name="GSE62944"; version="1.9.0"; sha256="1s28rkr5nm91vnl6cx0gifib4nw70gs8bhmv003f9kbpiq420i8k"; depends=[Biobase GEOquery]; }; - GSVAdata = derive2 { name="GSVAdata"; version="1.17.0"; sha256="1gjc9psmx0i25bwki6l74d8jg3mrvfzjdnxs5bhbqnzab6fzdfh0"; depends=[Biobase GSEABase hgu95a_db]; }; - GWASdata = derive2 { name="GWASdata"; version="1.19.0"; sha256="0i09njrq0fzwvzj6lqsa7kdnwi35lm7z0akywh0mr87i6dlqj8sq"; depends=[GWASTools]; }; - GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.9.0"; sha256="1h6ghr75h1i87lbarsganiw6mgjyiha4zv4hbjdjljc464s11b0d"; depends=[]; }; - HD2013SGI = derive2 { name="HD2013SGI"; version="1.21.1"; sha256="1m3q08m21vim5j520wgiwszrp6nnkrsfqf6wac8cyzw1qs3cp1s6"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; - HDCytoData = derive2 { name="HDCytoData"; version="1.1.2"; sha256="1ay7r0aya0b6rxwscg3lwzlgl9iaj9ykii52lmzpxx40yc6szpnv"; depends=[ExperimentHub flowCore SummarizedExperiment]; }; - HEEBOdata = derive2 { name="HEEBOdata"; version="1.19.0"; sha256="1z8qb5xrzadg6fxg8cx04dpad3qiab5m8vhgdqw4xs8xdaqd4g1m"; depends=[]; }; - HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.21.0"; sha256="0pgb0r6zp6v0wq16c5zjxzjjwb6cjjp3cn8jnh4p91rwf43za4rh"; depends=[]; }; - HMP16SData = derive2 { name="HMP16SData"; version="1.1.4"; sha256="0qjqf7ipczv3rs4r4l5ynagi46ksb98b8mylgvbclrqp7ny2wcbq"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors SummarizedExperiment tibble]; }; - HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.1.0"; sha256="0fl3r3sdnnn3s9h5sn0bmgpi0hj965cwgca51qkwcvll4rjamyq2"; depends=[]; }; - HarmanData = derive2 { name="HarmanData"; version="1.9.0"; sha256="1c6avjny0fasj99q0a2dm8p3h68jalcglx51b90fnyjgvqgx3h2g"; depends=[]; }; - HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.3.0"; sha256="07fvdf6kzipa42r5dmmld7p2chbi074d248da0xmlm8lm1i0wkc9"; depends=[ExperimentHub]; }; - HelloRangesData = derive2 { name="HelloRangesData"; version="1.7.0"; sha256="05yr2mklxwfij6yzmhpk83mlrq7zfcn8finf2m4lrvdbdzl1bkki"; depends=[]; }; - HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.1.0"; sha256="0nmd7iqa6cg74xvz1a2x9ahyzs3kwd4fnhz5nkh62sgndj1pv62l"; depends=[]; }; - HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.17.0"; sha256="0hjhlq7vx71lwv37vidwlb819hm617dx7g39hgf20ggccmp310rh"; depends=[]; }; - Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.17.0"; sha256="17mnwnpsam62mc8bqdwjfh9fiayasbkx1gd3bbp0k82w3az9yzbf"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; - HumanAffyData = derive2 { name="HumanAffyData"; version="1.7.0"; sha256="02hp2a7h0ivzdfql3vsrvxrn4answlr7hrhw5azdjw8jh895dd1j"; depends=[Biobase ExperimentHub]; }; - IHWpaper = derive2 { name="IHWpaper"; version="1.9.6"; sha256="19fg4ca9hhlh4as0nyd3qkkgqphghgvlcs57279pl42nphzz1hw0"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; - ITALICSData = derive2 { name="ITALICSData"; version="2.19.0"; sha256="0i09g3dj3rz0yr4n35g9fhc5df957i928vbinsx2bl3jsj7xrf6f"; depends=[]; }; - Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.17.0"; sha256="1y219yqipskv3mzf7g75rmzwsp5sq2r9cqacbpyc2gk28z6dfnix"; depends=[]; }; - IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.19.0"; sha256="0b6zhvkhpjhz9wr3cfcvyy16l1kvd6aq9p58y78ql9rgpbhz7dcz"; depends=[]; }; - Iyer517 = derive2 { name="Iyer517"; version="1.23.0"; sha256="0986lrh1w5c1y3rlc0rx06046h0nw8cdqp1mbsddllpibnbj4ii3"; depends=[Biobase]; }; - JASPAR2014 = derive2 { name="JASPAR2014"; version="1.17.0"; sha256="13hrxj4q2r9bdzwnl0qm5ap92051483876rwq73bz6hy5xg73abx"; depends=[Biostrings]; }; - JASPAR2016 = derive2 { name="JASPAR2016"; version="1.9.0"; sha256="1gx14sjv9v5705h1763p5js37jrvvlkiqdm7nrawjs4n6y4cpsdf"; depends=[]; }; - JctSeqData = derive2 { name="JctSeqData"; version="1.11.0"; sha256="1zrnmvs1mmg07s5fi8m5yqb975kb1nkx98j0shpk9xi5jdbf7x0d"; depends=[]; }; - KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.1.0"; sha256="1d4qg0svrmfc6v7dhgxbsn0xfhyplizfh113n26z64y97nfhc21p"; depends=[Biobase BiocGenerics]; }; - KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.19.0"; sha256="0w2a3yjp5xhbxq0vhzyka8sx17a095ddnpm4jhac65s6zmndgqr3"; depends=[Biobase BiocGenerics]; }; - KOdata = derive2 { name="KOdata"; version="1.7.0"; sha256="0grvn2pc38zv133v60hvjh1jx9dsbrwxrz9c6fb977z1rznrkzz8"; depends=[]; }; - LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.19.0"; sha256="1i6rl8mziv8apxxa2hlmsg6ramq4aasbg9nxj963lsk9b6gnrzlf"; depends=[IRanges KernSmooth]; }; - ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.13.0"; sha256="1p3f67zdihy5prbgqm27bdpnz3gmag3jnya0y7gxaqn3lkdd1vns"; depends=[methylPipe]; }; - LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.17.0"; sha256="0rgbx36c4hdjc67jsmhrbzyhk3ib8vgmif2g131rly2057zs43f2"; depends=[]; }; - LungCancerLines = derive2 { name="LungCancerLines"; version="0.19.0"; sha256="11yycm8l0ykkb22h9rppaqrkvyyphz7q8k5zgha06c4h0lcf9zqi"; depends=[Rsamtools]; }; - M3DExampleData = derive2 { name="M3DExampleData"; version="1.7.0"; sha256="0iaaxz3k7kw2qfaq5c7nx8jbyy4lg3csvsgnci7aknm4iqdgzc7v"; depends=[]; }; - MAQCsubset = derive2 { name="MAQCsubset"; version="1.19.0"; sha256="1c9gng9mr56h0pqc6xsr489d8m6xixg1iyw6ivdjdm38yg9l5q8h"; depends=[affy Biobase lumi]; }; - MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.19.0"; sha256="1901vmaq8k8ip508w3s37bdvrhzbd1f36zgz4z7i2f93464yh188"; depends=[affy Biobase]; }; - MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.19.0"; sha256="1qknpl7k22rbn3v5m4jqs0xiiw2n8wz32qbqsdy13300ynwlvvkn"; depends=[Biobase lumi]; }; - MEDIPSData = derive2 { name="MEDIPSData"; version="1.17.0"; sha256="0pazyx7xsvxsv36yhhxjbiyfdmd19ifrbbbfj685hgdx0mpiz8qa"; depends=[]; }; - MEEBOdata = derive2 { name="MEEBOdata"; version="1.19.0"; sha256="1naapb5mskfr482lfs5z1ya2bbsz3jwcpm3mm15dhrxl7rrd7z98"; depends=[]; }; - MIGSAdata = derive2 { name="MIGSAdata"; version="1.5.0"; sha256="15v3gva9xprr24fv3p49lvwgnh56g9x3nj2qqdd410i1avwn6j8n"; depends=[]; }; - MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.17.0"; sha256="1bjkdyf0knkdbzdmlas81dhnm5k7yslq6km3yzffrvn1kssml47i"; depends=[]; }; - MSBdata = derive2 { name="MSBdata"; version="0.99.1"; sha256="1bgzzrynb4066xps7wagawb2pjd64qab7n9il2znsidfprm03bxj"; depends=[]; }; - MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.3.0"; sha256="10i3gg9fbhcj6fz4fz1jzmqmabdf9c39ys8yp40qs60glv9gj3qa"; depends=[]; }; - MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.1.0"; sha256="18y2ljddzk0g7cn5v8cpc151mrdfzhvj0ah4c988lmc6xlqcyjsv"; depends=[]; }; - MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.1.1"; sha256="1lzqv8alxccmfp6s4ylyam9ljwga9p9q5ndnhsljnfiyw820md78"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; - MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.1.1"; sha256="1djqlmms5a24g8n6mimp4fib3h6qd17p1cl9anzmvl3zscz23p8y"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; - MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.1.1"; sha256="17vjfnlxrkmdxifmbpfq81zqzzpdhkm5s1aagcnrhgzkv9prszms"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; - MethylAidData = derive2 { name="MethylAidData"; version="1.13.0"; sha256="157qvzvw8hhw25qnzv7xax3vzmq38bw4fp0k34jfwgq944srv0h5"; depends=[MethylAid]; }; - Mulder2012 = derive2 { name="Mulder2012"; version="0.21.1"; sha256="1ypxdys24g8k98jd50sldqggy28fmjy1cq7gc3pxa10rww6g9h57"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; - NCIgraphData = derive2 { name="NCIgraphData"; version="1.17.0"; sha256="090s04iwbnhdbgprcy15hl596vmgq8x97v34w2xvmsdld5b8z58d"; depends=[]; }; - NGScopyData = derive2 { name="NGScopyData"; version="1.1.0"; sha256="13dlsznbg3kk7pi0gdzwnh9i3qdk538qh4rnjbpxr6iw61hwl0zd"; depends=[]; }; - Neve2006 = derive2 { name="Neve2006"; version="0.19.0"; sha256="0fn77ic133wfdjrnh5vdk95rwx51nigfmznb7i94n8h5hddmpnbc"; depends=[annotate Biobase hgu133a_db]; }; - OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="0.99.11"; sha256="1w38ii5wsaiar4lbn5428pyinzg07zvw4c7fac6a3nx70mhpnxn5"; depends=[MultiAssayExperiment]; }; - OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.3.0"; sha256="0ih472qrzx183pyk0k8agwybn5bycx3hx1j2amjkp42p7hml4iqj"; depends=[rJava]; }; - PCHiCdata = derive2 { name="PCHiCdata"; version="1.9.0"; sha256="19cmbyhsi84pi89fy623f7r5yld7qifnqfpvwcb3n7ads5idq1qm"; depends=[Chicago]; }; - PGPC = derive2 { name="PGPC"; version="1.9.0"; sha256="10z8r98lp92dh14wpf2hs5n3jzw9y3dw6mf5ssx469368hhaypma"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; }; - PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.21.0"; sha256="1h7x57vvplxbmsxwalgnkbxwnl91qnfyrn1j6cwyak9pzh58aqh0"; depends=[affy annotate Biobase PREDA]; }; - PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.15.0"; sha256="1gq65gl4dkas9nl3k31k7xjwdry5c2bgj841w1llbb48wy9w06d8"; depends=[PWMEnrich]; }; - PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.15.0"; sha256="1ryrrw0fdi7bmw8h7pdi02yq9y39dkl0vppyf4ycasnbyn14ddrv"; depends=[PWMEnrich]; }; - PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.15.0"; sha256="1py3rsnd4s9x7r2mhzsp7hqaflg3ip2fgq3cf10f136fdrfcbf1k"; depends=[PWMEnrich]; }; - PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.9.0"; sha256="1lkqz0kp1jfsi1bvkqhvlqapp658qfm7b1p9kiwk9qakfl0nm7x6"; depends=[]; }; - PathNetData = derive2 { name="PathNetData"; version="1.17.0"; sha256="02wdp23y583p9sinhaqkv6lxp836m6kh7na8b2wv6qajanibzhl1"; depends=[]; }; - ProData = derive2 { name="ProData"; version="1.19.0"; sha256="0idv9icfzr52k96gij5mlyqyd48mjwka7jg1nhawiaj7g4c005yc"; depends=[Biobase]; }; - PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.7.1"; sha256="1ypwwrk643shfng4nqs7jpy25058ni2fqq4jhx2yc1j73bx8k834"; depends=[CAMERA LOBSTAHS xcms]; }; - QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.11.0"; sha256="134mzg2r3bpzcpag5vf2fq8g0xczb5qxyvqqcjzqw654mbafgczr"; depends=[QDNAseq]; }; - QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.11.0"; sha256="1j5qzwbc7a9h9hlda6c6f53pm6vqm4kdja4z144j4snyac88xclm"; depends=[QDNAseq]; }; - QUBICdata = derive2 { name="QUBICdata"; version="1.9.0"; sha256="1r1wcmd7s17gm5q682siy8ld65w6ylch9jamqjlbp8qiqqvfmzdd"; depends=[]; }; - RGMQLlib = derive2 { name="RGMQLlib"; version="1.1.0"; sha256="0ijyjgqnap1zmfh6jf4gz9xjiwyzzhyyghvydh6rwkyys46ci8zl"; depends=[]; }; - RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.17.0"; sha256="11hrk3cf86jgc7vf14wlyarar2vsnjs0i9wyzvmk76draq9frg30"; depends=[RIPSeeker]; }; - RITANdata = derive2 { name="RITANdata"; version="1.5.0"; sha256="0yn8nfvni9h4k9ngzccsqgbjrjvql5gp3haqyg9x334sjsi212c8"; depends=[]; }; - RMassBankData = derive2 { name="RMassBankData"; version="1.19.0"; sha256="172x6x7fnzjczi76ibmscbb51l8185lqgiypyyvlisp145mxssdn"; depends=[]; }; - RNASeqRData = derive2 { name="RNASeqRData"; version="0.99.8"; sha256="0mfgfmbngx87h9ymbqcdabla5rb26p1kh4rvp3g307rp3hraivcp"; depends=[]; }; - RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.19.1"; sha256="1c90s1vjp4w065zldlzrn64qakwnhfg3s6w3ddmx6hynbrc8lk8j"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; - RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.19.0"; sha256="0z1b986jvinzh3c1yl9q8wa66wgq8hp8rjbs23glxna77znvkp87"; depends=[]; }; - RRBSdata = derive2 { name="RRBSdata"; version="1.1.0"; sha256="18xm228jlpvv5z5r5k3nyjnnmizsyg5lkml4kdrkw8mv7gljgcyb"; depends=[BiSeq]; }; - RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.9.2"; sha256="19lwjkzs0wrvrgm5a81wq2qcqv2xa1irfnqbv6yrx9c3g3sk6zqi"; depends=[RTCGA]; }; - RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.9.2"; sha256="1ain3wscy6n1jjcb8wajpn9h7flhppih01mjjv6y3dxyyiqqchim"; depends=[RTCGA]; }; - RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.9.2"; sha256="0fisrp4mgl035lcwg4pj1zcrmfafsc0kgc6788h9nx9b1vh6s7w9"; depends=[RTCGA]; }; - RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.11.0"; sha256="1y63vnj59sv73zcrnwqd4ikdjx45y9sqb2pj1lnsrhvfbmjazi5z"; depends=[RTCGA]; }; - RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.9.2"; sha256="1bb9b83y3f9012gnr19c2wacj1fkqvbqnymdv3qyc2pn6qhzid93"; depends=[RTCGA]; }; - RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.9.2"; sha256="1a97cdwm7rn9mipw3v904r4j4ay6p26rv3f8lx2znhz5hg44gnaq"; depends=[RTCGA]; }; - RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.9.2"; sha256="1lkywq2nvpil8wi8nv73hfxs3hsi71d85n9if7ra4c6ib3frwiwb"; depends=[RTCGA]; }; - RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.11.0"; sha256="1wyiz22rw400hiqqnw41mqpvy8bbj1vxwx3v4vnz6x81drv2sc1n"; depends=[RTCGA]; }; - RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.11.0"; sha256="0z2k651pd0m9lxl3n62xf41xhk65n33cgf7d5zfwd03hbc07d0gq"; depends=[RTCGA]; }; - RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.1.0"; sha256="002q9rc6d0cr6gip9irlafi67ds4jlvxfnil2if30aw4h6l4apkn"; depends=[Biobase]; }; - RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.1.1"; sha256="08p1r5vpz92i7nmgdjsp0i5wzypb46lsdnlykci21nzf9ip12mc9"; depends=[data_table]; }; - RegParallel = derive2 { name="RegParallel"; version="0.99.9"; sha256="0n0qyiz2bqw5wi35f8rszrx668dl6hqw054lqakb2dpfpjlzz57y"; depends=[arm data_table doParallel foreach iterators MASS stringr survival]; }; - RforProteomics = derive2 { name="RforProteomics"; version="1.19.4"; sha256="1mm1cfsazajkhaim4grz2zi7ar4x2ljn5vq4rlv20gra3d4b82ca"; depends=[BiocManager biocViews MSnbase R_utils shiny]; }; - RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.13.1"; sha256="1l3za4hbrg38p9sh38qsj17hgg03cbgqga4zg0c4lcipifrpbbfj"; depends=[GenomicRanges]; }; - RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.13.0"; sha256="1wyy4m3p40i12hlwvz9ixqps8i4d5703gl0pcgl4i2485d78yv9v"; depends=[GenomicRanges]; }; - RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.13.0"; sha256="1kjvy1v0dbdm959cmsf2d5mnrbnisjpff12wl5gn44n2cg7bb65g"; depends=[GenomicRanges]; }; - RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.13.0"; sha256="1s1iy8x1x53ny1pyfgwwkiwc3jpjhdkcd9vpwyv2ix5g22jf8ag7"; depends=[GenomicRanges]; }; - RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.13.0"; sha256="1pp9y94rdk5wwapc4jbvs35x1z2agv4xvzxy3fl3h7hp22gaqr9p"; depends=[GenomicRanges]; }; - RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.13.1"; sha256="1cqannbgpr0s9qr1cx4d23rwjy6k63x25khdr7qx5939chz0r21a"; depends=[edgeR]; }; - SCLCBam = derive2 { name="SCLCBam"; version="1.13.1"; sha256="1b6da5i20w7w08jv3s2xdpp71qf7y1nxyv3qj3fz5jkw2aavds5f"; depends=[]; }; - SNAData = derive2 { name="SNAData"; version="1.27.0"; sha256="182pramjd14g1p0aawcjrv51xlyqkp9mhm84v3gnd9gnmkb69b31"; depends=[graph]; }; - SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.17.0"; sha256="15l23gw5ckxgr6pscl07jqwb1lz58g5893wnlzz4zpk3sd46d2p6"; depends=[]; }; - SNPhoodData = derive2 { name="SNPhoodData"; version="1.11.0"; sha256="1zm0zhf2987hls15b47jv6krn1cc8kp6jm64k4wqhp4dsjxwbaqd"; depends=[]; }; - SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.13.0"; sha256="0qhkhnxrcy5i7cs4cl5axc8y9dbzhzfl00c17qp9r4bf8292xf1d"; depends=[]; }; - Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.9.0"; sha256="1xnsilyjls3s048kl1jwqcs6sb4r33khga0z2zipsgk6aqnx81cc"; depends=[]; }; - SomatiCAData = derive2 { name="SomatiCAData"; version="1.19.0"; sha256="0aj84aljp7ih849qnyhmsibnsvg7cshj7xah67xhn5grzwk7v9hi"; depends=[]; }; - SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.17.0"; sha256="0bprp4cddjf9zlhv38q5y08zrzizqaxj4338wbzjq1ypnjyip2qj"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; - SpikeIn = derive2 { name="SpikeIn"; version="1.23.0"; sha256="1yjlljcy1wnxkxrcxaw26f96vkyvhqh9zq52l9s8d7gnrsfj44ak"; depends=[affy]; }; - SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.21.0"; sha256="1z6fbq2z2ry2v3sv48n20c07bi96gb1nfg81g5ylh4q7w79g8lvf"; depends=[affy Biobase]; }; - TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.17.0"; sha256="15521vpi6h1ydl8vw43h0plrgy7baj5bprzg8rs50yxgkphh9nns"; depends=[Rsamtools xtable]; }; - TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.17.0"; sha256="090y4vyipnlxxg78yxva7q5y81gawfpmkgjrsqiqr1smfalvx9yw"; depends=[]; }; - TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.5.0"; sha256="0kbab7fjy7waq5r6k2w0c8x811xd62v39p17acd5gk8gbw9gy919"; depends=[SummarizedExperiment]; }; - TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.1.1"; sha256="0lg2xmf9crcd3328sikjynicrapm32ffq8ay9p0r484rx0m5yvbp"; depends=[]; }; - TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.1.0"; sha256="160gj5q4n08l3llfqd0iim2054v8jd3a2pvvd7454amangnrrjd1"; depends=[Biobase]; }; - TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.1.0"; sha256="1njy5ab0a8p97gi8ci0bad1byl5k42a5shjrss8z9k3a0n9jzpxm"; depends=[Biobase]; }; - TENxBrainData = derive2 { name="TENxBrainData"; version="1.1.2"; sha256="1m4cajmp1h5mahlxbvyfvslqq3yfbcy8k46m5p0b73phvnw44846"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; - TENxPBMCData = derive2 { name="TENxPBMCData"; version="0.99.3"; sha256="00xjm8xr5f1dzghmr6p3mcjcir6a81gd99kgzznj5k90assggr45"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; - TabulaMurisData = derive2 { name="TabulaMurisData"; version="0.99.2"; sha256="185y3cxdkgj4gl4ai0nc0684nz357qscfsah559wdvvvqny25dmk"; depends=[ExperimentHub]; }; - TargetScoreData = derive2 { name="TargetScoreData"; version="1.17.0"; sha256="12bmw3qmkw9blmr5ikgx0qyfv1x6hda8d41fiy8gsb74fa4nifsv"; depends=[]; }; - TargetSearchData = derive2 { name="TargetSearchData"; version="1.19.1"; sha256="1hwfqsz1rivqq14x5z9d8nphxajfxhm70mgbi0pjzlzsravg487w"; depends=[]; }; - TimerQuant = derive2 { name="TimerQuant"; version="1.11.0"; sha256="1a49jaxgjhwl756a7wijswa90z03fz61ffp6w5h00v9qfzgnyf79"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; - VariantToolsData = derive2 { name="VariantToolsData"; version="1.5.0"; sha256="1kkz3zvba4mc237pxwj6z0c2jvbrgfaz3n5vm55bz6j47aas3i4j"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; }; - WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.13.0"; sha256="0f3llqwkc5d4av47871d45lfqghmncww9g5rgf58pydrnw7n93xv"; depends=[]; }; - XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.19.0"; sha256="1kac43fvng1pwa8hlbivd8pxan7agp9csp0nmh062x4kwamny3hm"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; - affycompData = derive2 { name="affycompData"; version="1.19.0"; sha256="14ss2b854dj36rzhx1z854r5hkxy0yqzlm5k0690gn5bwlah6rk6"; depends=[affycomp Biobase]; }; - affydata = derive2 { name="affydata"; version="1.29.0"; sha256="0sv5q59xfvlyk97ihki5sqdzy9nldjccxiscx3ii1xpp4xk44i3c"; depends=[affy]; }; - airway = derive2 { name="airway"; version="1.1.0"; sha256="0daywdjalqbqx6gxrg4fwiasa62h9jh8ibg9kh0vrd35mdazh7b4"; depends=[SummarizedExperiment]; }; - allenpvc = derive2 { name="allenpvc"; version="0.99.2"; sha256="04f6y2zk7c8prk22yl15qp9xf81dickn2ida8b5jdhzby6a4p1d1"; depends=[AnnotationHub ExperimentHub SingleCellExperiment]; }; - alpineData = derive2 { name="alpineData"; version="1.7.1"; sha256="1gdj474nc2s92i2m1f02ganr5vsv93315mk3dqdyyk05xr9banbw"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; }; - antiProfilesData = derive2 { name="antiProfilesData"; version="1.17.0"; sha256="0wyjfc02wm5x5d61fs6cs7g3s0j4aibpqkdiwx0d8cbbkl38ih3f"; depends=[Biobase]; }; - aracne_networks = derive2 { name="aracne.networks"; version="1.7.0"; sha256="1acngnqvg7vl402yfcw65rqs27a7sncl1xfz2893abfli2ccpbzx"; depends=[viper]; }; - bcellViper = derive2 { name="bcellViper"; version="1.17.0"; sha256="0rzzj4pla57z9825jcs2kx177xrcqfnh7jai41m8dwfxln6ccz25"; depends=[Biobase]; }; - beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.19.0"; sha256="13g7p6jrg9qa43zv8nhkgfz2pq7b3v6chgqmydyyz25q6jy28iqp"; depends=[beadarray Biobase]; }; - beta7 = derive2 { name="beta7"; version="1.19.0"; sha256="1gd1l8rh73k27sm1cjfy9rmsplrkji3zhzrzcldjmaaixl5nfjql"; depends=[marray]; }; - biotmleData = derive2 { name="biotmleData"; version="1.5.0"; sha256="0ccx398761qdnnsrjwrrg6qjrq01fv88999f2llyq9gpd3f43lgs"; depends=[]; }; - bladderbatch = derive2 { name="bladderbatch"; version="1.19.0"; sha256="0n9vwbj8cii67rhxvb1ps72k99rv251zcdr4w3r1jkbvcd61nvh0"; depends=[Biobase]; }; - blimaTestingData = derive2 { name="blimaTestingData"; version="1.1.0"; sha256="0r51zz7kh16zgadr2vzgrm5fywfs03mk2jk5qywb27agqbw5y40s"; depends=[]; }; - brainImageRdata = derive2 { name="brainImageRdata"; version="0.99.6"; sha256="0wbj8y1qskc23gqdwc815racv7kqplmh1v12y5y094fcgs6cq62p"; depends=[ExperimentHub]; }; - breakpointRdata = derive2 { name="breakpointRdata"; version="0.99.2"; sha256="13mfnd2ms1fnk6zmyz8l10qw8xhfmb8qjyc2r7hn1qmap6ld578f"; depends=[]; }; - breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.19.0"; sha256="0pn48n81vx2wq425q5wnga6n32apgajk0bwq78ri983plh7ik2b1"; depends=[]; }; - breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.19.0"; sha256="0b6z16m6kqkd8rfrdvjp6p4fbqs78s25fbiswnw0k8jzvz5yw5x7"; depends=[]; }; - breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.19.0"; sha256="0slagz3x2q1qykvjcfnh7k3ggpn2g34j4iqvnv7j3mdcc085hn1d"; depends=[]; }; - breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.19.0"; sha256="0470r0i59phz2rcnmi0sb2hvw87nvm5dq6s4dj6s6z5mn85g8hd4"; depends=[]; }; - breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.19.0"; sha256="0qgz0dsds0xd8d6assqd0715zfyk2y92251m3zq108ndqh5gn4bm"; depends=[]; }; - breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.19.0"; sha256="0ma62g72md7is365pbnqbdskacxqvvcnc65jzv8b7g1dwvayswp6"; depends=[]; }; - brgedata = derive2 { name="brgedata"; version="1.3.0"; sha256="0w9h12ns984h6k5zhz2x9ria4fa1wxp3k04f6qg5k1zw20v4q2d6"; depends=[Biobase SummarizedExperiment]; }; - bronchialIL13 = derive2 { name="bronchialIL13"; version="1.19.0"; sha256="1jg9jz03ab3fki6g293c0jclk8cfpj9qb6yzzskdpcz99xmhs2xv"; depends=[affy]; }; - bsseqData = derive2 { name="bsseqData"; version="0.19.1"; sha256="0gqwyx0l0xmd2aa46shq4kr11nfi1imj2pwfjc9026r47af5b84h"; depends=[bsseq]; }; - cMap2data = derive2 { name="cMap2data"; version="1.17.0"; sha256="11973w3gjz0qayxacx41mlbf4ji345js8jgjkn2aba0ahnyzb6vw"; depends=[]; }; - cancerdata = derive2 { name="cancerdata"; version="1.19.0"; sha256="02zi60lh6jsg6hlyyq6wzg9lzxjr8m9418kywlk3x3c6kkgkrh69"; depends=[Biobase]; }; - ccTutorial = derive2 { name="ccTutorial"; version="1.19.3"; sha256="1bghwfpdm2xzh6w1z2pinv9wxy3f5vx8aabyl5vj9smfmplgcmxx"; depends=[affy Biobase Ringo topGO]; }; - ccdata = derive2 { name="ccdata"; version="1.7.0"; sha256="1vdsldxl1xnjdi9ai346a1zx9jp6kw33884vwwy86xmj7799j3y1"; depends=[]; }; - celarefData = derive2 { name="celarefData"; version="0.99.0"; sha256="118rdgkz4vlhk5n5c683sl28xsjqds6m08w3nfsw8z7ki6kng9sx"; depends=[]; }; - ceu1kg = derive2 { name="ceu1kg"; version="0.19.0"; sha256="0vs60mflfc1pnc7s725wsyq2jrj44jrvxwzpw4bhlj0qbs602s8l"; depends=[Biobase GGBase GGtools]; }; - ceu1kgv = derive2 { name="ceu1kgv"; version="0.23.0"; sha256="10jnbc8y386racq3ac1hf1dp76wvzlfm8p66c94pk3f2m0w45psv"; depends=[Biobase GGBase]; }; - ceuhm3 = derive2 { name="ceuhm3"; version="0.19.0"; sha256="1qdp85ps5xrlx1pl769j91aig2rgxcix4pdzrsa249nyyq1avdym"; depends=[Biobase GGBase GGtools]; }; - cgdv17 = derive2 { name="cgdv17"; version="0.19.0"; sha256="1n67nx1har6mswv5p2cb1xfrawkkhzrzxy7fpc6091yy3ypw1s5w"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; - charmData = derive2 { name="charmData"; version="1.17.0"; sha256="0hgac6z9k3frw648479jf8m6n2wlljhln7n8y13lbsdv5wakln87"; depends=[charm pd_charm_hg18_example]; }; - chipenrich_data = derive2 { name="chipenrich.data"; version="2.5.0"; sha256="0j9zdc0xrxi7vjyl3dzkvr8g24cxc1kcvw52vplrd5njyyka5vw1"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; }; - chromstaRData = derive2 { name="chromstaRData"; version="1.7.0"; sha256="0arxcqr1yrs00i7a8xncprixzm8lc8ljrbh371ckjdr7641g63gq"; depends=[]; }; - cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.17.0"; sha256="1inxvj6sfl7n3cxzswkllbjbjwz0rm803hkycy4wxcsq7416sj21"; depends=[cnvGSA]; }; - colonCA = derive2 { name="colonCA"; version="1.23.0"; sha256="1mm0zb003izia6j502n4m91vad6iz3ymf8nn4f9wlj20di66fvx6"; depends=[Biobase]; }; - curatedBladderData = derive2 { name="curatedBladderData"; version="1.17.0"; sha256="14xwq55g83pvwyxm7kl6hq9c4j2bd6vp63afir619d5binl6i7ln"; depends=[affy]; }; - curatedBreastData = derive2 { name="curatedBreastData"; version="2.9.0"; sha256="024sx3am50vsaaixmj8gfp3f905rf7g7qyn47sdakpv6sx48k1zl"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; - curatedCRCData = derive2 { name="curatedCRCData"; version="2.13.0"; sha256="1f6m6sllbxzca27lwyvav2d4si65w7fs9mh4mksw2sn8n8x5452v"; depends=[BiocGenerics nlme]; }; - curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.11.5"; sha256="1rcznh6h7vrwicf545jfxabrjwqf1npxqpp6hdfnf5bylkfrc1d9"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; }; - curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.19.0"; sha256="0yvc1kpy4ql2sd467dggi6kpwxrvvqyasr0mgc61s1snmakvm06y"; depends=[affy BiocGenerics]; }; - curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.3.5"; sha256="01m4kld5cp0ff5wlwk2wln15vyjxgahzbk3xkzlg81yvs67ai2vr"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment S4Vectors]; }; - davidTiling = derive2 { name="davidTiling"; version="1.21.0"; sha256="18ivz1z0il8s9sk6c5mzgipsbs8xswbq7swwm422ji1yp75lkd9p"; depends=[Biobase GO_db tilingArray]; }; - derfinderData = derive2 { name="derfinderData"; version="1.99.0"; sha256="1dv6j91c9xs19pynza54gs127qqf5xk66rwin6rby0dcv58ng6s4"; depends=[]; }; - diffloopdata = derive2 { name="diffloopdata"; version="1.9.0"; sha256="12a5338djyhg94q7wdahij4c9dnrx5qx04a1g9304wpk5z6cmxni"; depends=[]; }; - diggitdata = derive2 { name="diggitdata"; version="1.13.0"; sha256="09b1mk68mg3jqf63c54xdh805vd79hbnnh02rf6qb3pq6w9b6z64"; depends=[Biobase viper]; }; - dressCheck = derive2 { name="dressCheck"; version="0.19.0"; sha256="0k3h5i86345xx0d31qim1d1aw25axwy48hiq717fbnz2mpwsggj7"; depends=[Biobase]; }; - dsQTL = derive2 { name="dsQTL"; version="0.19.0"; sha256="0lwgnkvzpipqnzfh3vlqgk568ys1bqjyfih97c7vb8mn57i100fz"; depends=[Biobase GGBase SummarizedExperiment]; }; - dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.21.0"; sha256="0k99wgjm4a7mjs76p48mwfp2y17xn4r2bral2c1hbyj2y4bl1ycz"; depends=[GEOquery marray]; }; - ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.21.0"; sha256="1pbindvfhr7lf01r0kncp23f6jxlwmkd362mix2gw2g006a83y4f"; depends=[affy ecolicdf]; }; - estrogen = derive2 { name="estrogen"; version="1.27.0"; sha256="1m0q2k6p6ydp7ykqwi9a079knxmp14xlrpcwncklsapibcvyz8lr"; depends=[]; }; - etec16s = derive2 { name="etec16s"; version="1.9.0"; sha256="0ljn90gf4sm7615xw25dil15kgf81gl0hvbp24snx4nbflnhns4q"; depends=[Biobase metagenomeSeq]; }; - faahKO = derive2 { name="faahKO"; version="1.21.0"; sha256="19dxcf3yfgy8h8xn76h7x2ihvgy90923a28j3b2k972r84zzy7gk"; depends=[xcms]; }; - fabiaData = derive2 { name="fabiaData"; version="1.19.0"; sha256="104c70pp9cnkx3y2mm6yxj4vj6k2mqrhw1n2cibhxnnqnl2lnwnr"; depends=[Biobase]; }; - facopy_annot = derive2 { name="facopy.annot"; version="1.1.0"; sha256="0snc9v8jy3dnxidk7g9lppxcp35flgdgp132sap8qkh6d1qc2rwd"; depends=[]; }; - facsDorit = derive2 { name="facsDorit"; version="1.23.0"; sha256="0xxdz1xfb661pnrqji6vxsmmr90h1v1i195k9gb4dll6hwbq0n11"; depends=[prada]; }; - ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.19.0"; sha256="0jjaj492k4akc30yvr4q8y31wdi152iq5s3pl5i10sl9xrbg80hj"; depends=[lumi]; }; - fibroEset = derive2 { name="fibroEset"; version="1.23.0"; sha256="1g22av8zj4nq9prnps7zgrzvva9d5a6h016llg0brpf9qjpg58p3"; depends=[Biobase]; }; - fission = derive2 { name="fission"; version="1.1.0"; sha256="04rwbx0dd6fjyg76jw62vimllq40lb432bzmpf051x9gjqfyx0v2"; depends=[SummarizedExperiment]; }; - flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.17.0"; sha256="1ahg5g9ypxbhm7jrsbq1hjk5r5fmgvirawfd2xqfiaw5x9pkmrai"; depends=[flowCore]; }; - flowPloidyData = derive2 { name="flowPloidyData"; version="1.7.0"; sha256="0f3cnq2s215a6wrz2cbp90219smvhr4zsvl02wbd40xb8902zhdc"; depends=[]; }; - flowQBData = derive2 { name="flowQBData"; version="1.7.0"; sha256="1xla98i06j1qi2w88x1v8agvqcljzwxfcxakw0fl6phwl07hz9na"; depends=[]; }; - flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.17.0"; sha256="058q46w84jd7rf50pn26fiyh1n312jvxbcdrm5i2mmzg358hrr6y"; depends=[]; }; - frmaExampleData = derive2 { name="frmaExampleData"; version="1.17.0"; sha256="10lr219ghj409himn3g080s5saln3k355x9jhrk9fx69r8g127d7"; depends=[]; }; - furrowSeg = derive2 { name="furrowSeg"; version="1.9.0"; sha256="1a4gwrbqliz3cwn9iqwsn27qhmq9l3rh9k59ca94vsjmkrqx7bjk"; depends=[abind dplyr EBImage locfit tiff]; }; - gageData = derive2 { name="gageData"; version="2.19.0"; sha256="1zrps414095nkc49f90a7f8zy224ll60dm6b46sfkajd35bprafj"; depends=[]; }; - gaschYHS = derive2 { name="gaschYHS"; version="1.19.0"; sha256="0alxcrnk8kyjrs73idgihwvz42hbn4d6laayl849rzcna1fp48sp"; depends=[Biobase]; }; - gatingMLData = derive2 { name="gatingMLData"; version="2.21.0"; sha256="16gwgign7bq4yccq36wav2w8xl193c6aca6bgh9l8fv0z0rdgxnv"; depends=[]; }; - gcspikelite = derive2 { name="gcspikelite"; version="1.19.0"; sha256="197lx2a6jlsrv5bg3ih28maikyb8jk91krifk80xys3yfhp9dhyb"; depends=[]; }; - geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.17.0"; sha256="0qxdhn5is2d47iv01z7in8gd3s2dzrgir8s8j4611f7sgy9s9px4"; depends=[GenomicFeatures rtracklayer]; }; - genomationData = derive2 { name="genomationData"; version="1.13.0"; sha256="02fq74q6vkraivdrka8l0hascvsxg2ys6p40774vjhrhrcvmnfkm"; depends=[]; }; - geuvPack = derive2 { name="geuvPack"; version="1.13.0"; sha256="07h53q19zg89rvzjk3aqgp52gynlxg5frxm5h2q3q5ihidp118cr"; depends=[SummarizedExperiment]; }; - geuvStore2 = derive2 { name="geuvStore2"; version="1.11.0"; sha256="1ggac70x9pblbnzm6wg6rpmbgrkf802b2vgnfah1516grx0dwrkd"; depends=[BatchJobs GenomicRanges gQTLBase]; }; - golubEsets = derive2 { name="golubEsets"; version="1.23.0"; sha256="1h45rwz6z4wgibbyafv8946vfs303km7ixcradml4ymbpwibp4ib"; depends=[Biobase]; }; - grndata = derive2 { name="grndata"; version="1.13.0"; sha256="1ybgk5nf9nqrmw4mchpf183zyik6szzsm2cxh619fv27f0i3hjzk"; depends=[]; }; - gskb = derive2 { name="gskb"; version="1.13.1"; sha256="1jpl7vm2r28bf70mv2sy0dkdn6yn27w96ja2a0yynbpd509v8fwg"; depends=[]; }; - h5vcData = derive2 { name="h5vcData"; version="2.1.0"; sha256="036bvqd8glpk2armbv42wxv28k6rqg301l7i04wp85d94ipgn6yk"; depends=[]; }; - hapmap100khind = derive2 { name="hapmap100khind"; version="1.23.0"; sha256="07r1nsl92awkkw41midkb9iv4c93my7c222li2f4mym8hn4ahn8p"; depends=[]; }; - hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.23.0"; sha256="0dvb3b2ls7g66vsv9qzl29kkjmdd6mwrhqxzj0a1d7qnkg48kgy1"; depends=[]; }; - hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.23.0"; sha256="0jqyvd1khz84l1qw31xk2szb9ycsp76yrs1h81ahg64sslygnfg0"; depends=[]; }; - hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.23.0"; sha256="128p97qmp7br5vwmn934akkh0h4xgirpzc4q7kaxh3w211rch7rm"; depends=[]; }; - hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.23.0"; sha256="0a1n93nin8hpqh0qswbl9phlwgllam0xxpa2qxr63dyd5k1liwz6"; depends=[]; }; - hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.23.0"; sha256="1m17r4va3vbiml0avlb7xp2qhh82vig934h3gpmz9190hy6ikds4"; depends=[]; }; - harbChIP = derive2 { name="harbChIP"; version="1.19.0"; sha256="1566kxfblk6z4dia4f3gl3v0dsz8lx343nlflbp2wfb6gd314dl6"; depends=[Biobase Biostrings IRanges]; }; - healthyFlowData = derive2 { name="healthyFlowData"; version="1.19.0"; sha256="052kvg8gvfbqc4fpr8np1q9li7f52daq1rndpg7zmc5zn4nqjzrn"; depends=[flowCore]; }; - hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.19.0"; sha256="1c113f0aj51mdvdizi6m2wmm0v7zxsa3pkp3bjq2426v449qr3ls"; depends=[]; }; - hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.1.1"; sha256="1h1n76j6l0nqqf18a5w5c8vmjd579jdh2ix84j70s30nkzbyxhyw"; depends=[Biobase]; }; - hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.19.0"; sha256="005llh7vpfc01qbq1wnq1nribqgh1kj7mw0rz59dsmr92czm7lbi"; depends=[]; }; - hgu2beta7 = derive2 { name="hgu2beta7"; version="1.21.0"; sha256="1d80nxbf8ffmh7ipvxw2smvhgq4xvjhnhmwpwmkwn30yghrm46wj"; depends=[]; }; - hmyriB36 = derive2 { name="hmyriB36"; version="1.17.0"; sha256="1s1gsysv8wsk9fzd34fjw2rp6jk8nysg1wd6dhay5mqphv92abkh"; depends=[Biobase GGBase]; }; - humanStemCell = derive2 { name="humanStemCell"; version="0.21.0"; sha256="02y71ydwlygn6yickjx3gjsmrhp6dnvqk5319is70gwd214466r1"; depends=[Biobase hgu133plus2_db]; }; - iontreeData = derive2 { name="iontreeData"; version="1.17.2"; sha256="1y3jawc5rs1fhv90yygkjghp1ir4zw540hi2ncml4lm003d42ghq"; depends=[]; }; - kidpack = derive2 { name="kidpack"; version="1.23.0"; sha256="1ib24nbvqgids10k1glvpswavnv0qd14nvx9bw13bk09vndagkyi"; depends=[Biobase]; }; - leeBamViews = derive2 { name="leeBamViews"; version="1.17.0"; sha256="1mldlpdpnivfi60rnsbz7466jf9ssyfgb2xv9ipwc8nlmszd6g45"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; - leukemiasEset = derive2 { name="leukemiasEset"; version="1.17.0"; sha256="15c31vzfn83pfjj8bmvg4sl0hynlvaz2wcg3fzlxmlpbf6b5rqd7"; depends=[Biobase]; }; - lumiBarnes = derive2 { name="lumiBarnes"; version="1.21.0"; sha256="043w39jdc35pgblprh2p4crpxcix39ya9kg3g4q8dcajasr13dag"; depends=[Biobase lumi]; }; - lungExpression = derive2 { name="lungExpression"; version="0.19.0"; sha256="1rbbkjv3vjrk6d22k7msnq124y47a8pb4vdf388f1a8j9403jfpi"; depends=[Biobase]; }; - lydata = derive2 { name="lydata"; version="1.7.0"; sha256="0lq17l0klsn081m2nd9hrx50nxksvf7186drby66qvq6bhw3vhms"; depends=[]; }; - mAPKLData = derive2 { name="mAPKLData"; version="1.13.0"; sha256="1h4x00a7rziqm3cqkddpp7ahrb36045yq71lskdjyp43k066jplw"; depends=[]; }; - mCSEAdata = derive2 { name="mCSEAdata"; version="1.1.0"; sha256="0rcfyk6mwlxgkk7q40djbcbd4kx4vyy79h6dxb37zd7mpzxj03nx"; depends=[]; }; - mammaPrintData = derive2 { name="mammaPrintData"; version="1.17.2"; sha256="0015cz3czxzzrx7ba8lqr1a5i4nh1mns114br660y9d32j1nsw0f"; depends=[]; }; - maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.25.0"; sha256="14m82492wb7jmqwjllnqak9rivyky1prcqgp1yn0g05c406fj0r9"; depends=[]; }; - mcsurvdata = derive2 { name="mcsurvdata"; version="0.99.4"; sha256="0kv2gq9vr0z2sg8v7mv0ky66gvwf2hbaisw2g02a81bzhjvyjky8"; depends=[AnnotationHub Biobase ExperimentHub]; }; - metaMSdata = derive2 { name="metaMSdata"; version="1.17.0"; sha256="0j6h0s75w50jp3lcfs5cilqaqhhinlfn9c6zlpki6906fj1q6dxx"; depends=[]; }; - methyvimData = derive2 { name="methyvimData"; version="1.3.0"; sha256="0jacj9jyqs5x11xds6bindab6q96br95r37dxmgxw5gxl9lcn6ql"; depends=[minfi]; }; - miRNATarget = derive2 { name="miRNATarget"; version="1.19.0"; sha256="05x4vl8x2brm3bj04kddzcqjnm72jw29prmcwr1ildbaadmzh3fg"; depends=[Biobase]; }; - miRcompData = derive2 { name="miRcompData"; version="1.11.0"; sha256="1qgzplmv16anh7c760nf51fh671z0lmxqmkn0qfmj55d54gfgfmh"; depends=[]; }; - microRNAome = derive2 { name="microRNAome"; version="1.3.0"; sha256="0hbs64bhd129cq098y5ijf6q2nvn2w382d29isws92q1ln12r36b"; depends=[SummarizedExperiment]; }; - minfiData = derive2 { name="minfiData"; version="0.27.0"; sha256="1h7mb52p73bw66rxwjjfmaan6scs9pc6rj2f9wb5hx9hddwz5xy4"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.7.0"; sha256="119sr9yb82dlcjgddlqwzgn72c7zghz26kzdda48s9zxlf31f9yp"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; }; - minionSummaryData = derive2 { name="minionSummaryData"; version="1.11.0"; sha256="1i5ilakb9a4w7zf4zwymmpxyqn8s4y7295gdw2spgafgny0ayvag"; depends=[]; }; - mitoODEdata = derive2 { name="mitoODEdata"; version="1.17.0"; sha256="1pabl518xj88hlpfdqsbg2178ac2in11ma3y0syvq7wr2nqdqj6s"; depends=[]; }; - mosaicsExample = derive2 { name="mosaicsExample"; version="1.19.0"; sha256="17xvlaxlw6jn7w81dyg74n84nny6apaxv8b7qbv7gcyil3h2xr7f"; depends=[]; }; - mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.19.0"; sha256="1y7vkiqp4mkf16mpl5yl1jzmh1fv67d6k4i8qfi1lm68q2av9ggv"; depends=[]; }; - msPurityData = derive2 { name="msPurityData"; version="1.9.0"; sha256="0z7gs75bci301mhhp9j8lxpivjns2bmr51vsz04d4k308j19w1wv"; depends=[]; }; - msd16s = derive2 { name="msd16s"; version="1.1.0"; sha256="09zjzad3blq6i1m6fnkfjpllnvjn9vlrlc075gcm2gpwcx4w775a"; depends=[Biobase metagenomeSeq]; }; - msdata = derive2 { name="msdata"; version="0.21.0"; sha256="1srm1djnzfrj6klzxm2s721glk75lakb2428arqn3bm8vzvqw5vy"; depends=[]; }; - msqc1 = derive2 { name="msqc1"; version="1.9.1"; sha256="041fz9md3q95p1cwc7bcqam2z555sin2ib7ryssp79hp8iibx50g"; depends=[lattice]; }; - mtbls2 = derive2 { name="mtbls2"; version="1.11.0"; sha256="1ismd5yp3vgj1cqp4y92gy5z856bs6sy3fgbigjjba2rrb3m4k1z"; depends=[]; }; - mvoutData = derive2 { name="mvoutData"; version="1.17.0"; sha256="13kakn04xrngx9m80m1gqwdx3f75qixy6h9y0jvh16jk49kdnxcd"; depends=[affy Biobase lumi]; }; - pRolocdata = derive2 { name="pRolocdata"; version="1.19.5"; sha256="0gci5k1wxmnwy76nhnpjm9hysxpzjz29xw8j8srp96zn1bskaayi"; depends=[Biobase MSnbase]; }; - parathyroidSE = derive2 { name="parathyroidSE"; version="1.19.0"; sha256="1dmnm348yxa9p6lnia4iiil1s4jkxj1n83frhml06brnqymbb9wn"; depends=[SummarizedExperiment]; }; - pasilla = derive2 { name="pasilla"; version="1.9.0"; sha256="09rzh3w8nki9gqsk3pznk867ipg7s7imz7ma67cl0rh8pz2vg05i"; depends=[]; }; - pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.19.0"; sha256="0d2b4qav1m0whr7gwn2h2962qd72i3fc0y9c36k6nxr7jyfmv1jj"; depends=[]; }; - pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.11.0"; sha256="1s5nilgzs1kgdjaqyq7warfg672qvd14m61bdvl0g12bkab61sv8"; depends=[]; }; - pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.17.0"; sha256="0wwd5cc8ywi5181q8hrxw6jx6pxyrfayfdpw7jzp3nkj8x222d31"; depends=[]; }; - pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.17.0"; sha256="0g5y5nsi99dsx6n1zfjlc6vi4ikmv2l1ba6sbdid9019k79v4495"; depends=[]; }; - pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.17.0"; sha256="1qz6saflpsa9naj536k7ciqks95hb6l1z2v6srclqq7b45465h1b"; depends=[]; }; - pcxnData = derive2 { name="pcxnData"; version="2.3.0"; sha256="1whw0wrfq1dfbxpfcz9z749dh27fadxmwp3dln945qh0nrjli6zc"; depends=[]; }; - pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.19.0"; sha256="1rfp34332p0fbx9yfb87rlhwwzjy1pm3zf372pvhv1r7qm8w3dyh"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pepDat = derive2 { name="pepDat"; version="1.1.0"; sha256="0yqlsdzjqwdvjfy7p6rls2xy5bph75pivkvizj575pmagdviv882"; depends=[GenomicRanges]; }; - plasFIA = derive2 { name="plasFIA"; version="1.9.0"; sha256="0ivyvrx2wmr9wsi852h3fdkbc8qrxhx1gf21aiazlygz3x796fml"; depends=[proFIA]; }; - ppiData = derive2 { name="ppiData"; version="0.19.0"; sha256="0hglfcyzlz7j090qylilqxx9jhivk3ipkq6q0zn2grydrj0g0xib"; depends=[AnnotationDbi graph]; }; - prebsdata = derive2 { name="prebsdata"; version="1.17.0"; sha256="1jccx76j7xqbl4660f0akh6bnvhcvpn1wkn2hchbv9w1s9ywy9pi"; depends=[]; }; - prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.9.0"; sha256="0wqm9wbqz15ls55mzvd6kfssix02pn2qaymin6s0b6w2imji85np"; depends=[Biobase]; }; - prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.9.0"; sha256="19r3gb718gll5fx03q1q0471r7fx25iix7ncff6v54pp4lvnjk9q"; depends=[Biobase]; }; - prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.9.0"; sha256="1y9pzi3w2k3fj6lnmlhzh5dvazb7vkqvchm1a6fi3lj3wdqv12lw"; depends=[Biobase]; }; - prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.9.0"; sha256="0pclqc7qzypwd4jvld3dmy43fc5hram1lzcfbdnp4vj8r86mw7il"; depends=[Biobase]; }; - prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.9.0"; sha256="02vg37vllda3yvw6lq7xggil6l3n7v4y37s2cqixqrrmnczzqb2z"; depends=[Biobase]; }; - pumadata = derive2 { name="pumadata"; version="2.17.0"; sha256="0ag7kv1k9jaj943l0szxlk2qfx5mlpspwsrnnyxxcpi3s8r8nyn4"; depends=[affy Biobase oligo puma]; }; - qPLEXdata = derive2 { name="qPLEXdata"; version="0.99.1"; sha256="05v19rlbskvy15504ys8x3s2hhbdzwnyz3dwjas6h0b7rs3d51p7"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; }; - rRDPData = derive2 { name="rRDPData"; version="1.1.0"; sha256="16xk33bry0203sr79lzs89pwzbqds29894fc2hjr9qs624wrzvnk"; depends=[rRDP]; }; - rcellminerData = derive2 { name="rcellminerData"; version="2.3.1"; sha256="1i149vpfm873nzykbxf93rkrmyjshri5xi7awmxf60yiwacbafkk"; depends=[Biobase]; }; - restfulSEData = derive2 { name="restfulSEData"; version="1.3.0"; sha256="01vbzdx354qpl58lznn9938jn93rf9nikwjfmy1w33z5cmirc7ad"; depends=[ExperimentHub SummarizedExperiment]; }; - rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.19.0"; sha256="1bcn3s36w3asb2di8851wg67dpx3rwalw9php1sklzrbh2f7jazs"; depends=[]; }; - sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.5.0"; sha256="06p4cq30diwx5flxc31lw3k6z66y6villf99qq99f4ab5x3gad94"; depends=[SummarizedExperiment]; }; - scRNAseq = derive2 { name="scRNAseq"; version="1.7.0"; sha256="15cxr52qakxhsbjnm8vl33qlwbvl3lghkrk4l2v0dih4mw4g65nb"; depends=[SummarizedExperiment]; }; - seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.13.0"; sha256="0z9dspkjvjn20q542bjq7xyc7fpy76y3ic01h14cvql42m0vhl53"; depends=[]; }; - seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.17.0"; sha256="0hz9vf8fplqm3gfrfiiirm0w6g9x6bjq7l96275aizbx3g6a80kb"; depends=[]; }; - seqc = derive2 { name="seqc"; version="1.15.2"; sha256="1bc4ibhb7wr08c794m1ljy3hz4fy0vikavg7g7y6l3rjfvlns7lk"; depends=[Biobase]; }; - serumStimulation = derive2 { name="serumStimulation"; version="1.17.0"; sha256="153zq6qpk02mkk31v5sl129j50wiw9n8c7n28f39w0mzg93yjyv5"; depends=[]; }; - sesameData = derive2 { name="sesameData"; version="0.99.5"; sha256="0y2xkxrbj5fla75rq4iysa5ckmvv6fnbi06nk372n0gyvi0v5w8d"; depends=[AnnotationHub curl ExperimentHub]; }; - seventyGeneData = derive2 { name="seventyGeneData"; version="1.17.3"; sha256="1aq5pzj70alv4kmi79kdyc9v0441gvfgibzf5j06zh6b2bc409x6"; depends=[]; }; - shinyMethylData = derive2 { name="shinyMethylData"; version="1.1.0"; sha256="1qd8193vvs22x8hfy70ih2m5gx4s46hd0fas9ann198vv4rhygxz"; depends=[]; }; - simpIntLists = derive2 { name="simpIntLists"; version="1.17.0"; sha256="1cgr86ibyz4xmhsrmrr0qx8f1xhclw7q4mrrbr5znvy4nvhbzpz6"; depends=[]; }; - stemHypoxia = derive2 { name="stemHypoxia"; version="1.17.0"; sha256="076h70m11z178q1v58rbb1731nskck64sr4w29x1jby8h87rqkvk"; depends=[]; }; - stjudem = derive2 { name="stjudem"; version="1.21.0"; sha256="1ccr0zcqwffizqbd624j980kn40hmic2497mj2ws19chwqxaz24j"; depends=[]; }; - synapterdata = derive2 { name="synapterdata"; version="1.19.0"; sha256="1yppixbw3pxsaag1zfsd39p78d5l8702ysxxjgnmi50ak0lrwb2w"; depends=[synapter]; }; - systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.9.4"; sha256="0k8nybycswz78l0v61nidnirw3i9k41f1150ssglxyhqsvxpn8xd"; depends=[BiocGenerics]; }; - tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="0.99.3"; sha256="16p36sailxw14f051c3k89gz2i9blky0vx961s36mmnd5sqn6skn"; depends=[bsseq ExperimentHub knitr]; }; - tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.19.0"; sha256="0mpj8j8s9380lf830b862k2rj1mpfa3vflkai5bacwnx9i3dbmnz"; depends=[]; }; - tinesath1probe = derive2 { name="tinesath1probe"; version="1.19.0"; sha256="07fyj1vdpzkz8iw6d9bqxgi4482rvq0r945p3rxa5a0cvwcsh1xi"; depends=[AnnotationDbi]; }; - tissueTreg = derive2 { name="tissueTreg"; version="1.1.0"; sha256="1whm1a9r5bmrdzqchv7qzgnxnclq1qbzqjv0p6f6d6y7mw3rr6f6"; depends=[]; }; - tofsimsData = derive2 { name="tofsimsData"; version="1.9.0"; sha256="17pwxdik4phg1cc10ycp2j38n63l1rfna8pzz16j05858ig24lif"; depends=[]; }; - topdownrdata = derive2 { name="topdownrdata"; version="1.3.0"; sha256="095mhjpni166p351k50y0605gb3ydsrhdnf8i92w6q84qnl9dapw"; depends=[topdownr]; }; - tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.19.0"; sha256="1gby12vp7b88h3g86r5r01lj86chs30q505qijv3zq769px7fd2g"; depends=[Biobase]; }; - tximportData = derive2 { name="tximportData"; version="1.9.2"; sha256="0j7nwkfrvli8wx3jvrfn1qygvzyzvmzlp5vq529ssqf6mka8i2r3"; depends=[]; }; - vulcandata = derive2 { name="vulcandata"; version="1.3.1"; sha256="1jgiryn6cpmbipaif5d5yhwrl692hc6nac5abjip31l0rqmf4qig"; depends=[]; }; - waveTilingData = derive2 { name="waveTilingData"; version="1.17.0"; sha256="1w0wvnk4r7vvg9xvqmpmwzbp1sr7plg214d6wgdwgmp9bm785vxf"; depends=[]; }; - yeastCC = derive2 { name="yeastCC"; version="1.21.0"; sha256="1kbhbqcab7p3p160xvgwka8gfhxnjl05p9hxb7jjixi4yr30dzvj"; depends=[Biobase]; }; - yeastExpData = derive2 { name="yeastExpData"; version="0.27.0"; sha256="13vz99brk9bb10swlrisiiwilyjn6pl1z3arw47sahm7grw4sgpc"; depends=[graph]; }; - yeastGSData = derive2 { name="yeastGSData"; version="0.19.0"; sha256="06gnrh6kll5rmdvhigrf7blyyap6dz517gkhx2ljvlbwwz1hd35l"; depends=[]; }; - yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.17.0"; sha256="0xq65383vmh1jnfxnfhrzfdhr5s0qzy0xb844d8lvmsn77mq7jpr"; depends=[]; }; - yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.19.0"; sha256="0sy72a0dvqq75hg599nfq6rv9frjwmvzqyissksa4dpbm8n3q086"; depends=[]; }; - yri1kgv = derive2 { name="yri1kgv"; version="0.23.0"; sha256="08i7iz0shrhh3pnn88x3fnkpqrics4nq43fcwzkk1582j1spg8yr"; depends=[Biobase GGBase]; }; - yriMulti = derive2 { name="yriMulti"; version="0.11.0"; sha256="0gsr2y94hfmjmpz37y7q80wnkhlz8q028qn7dwm15a5rvzvs8ccv"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; }; - zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.1.0"; sha256="1sfdzs0s0jjrm36v016zf4xbw2rl2gfibzbzvgj7vark30f8w960"; depends=[]; }; + ABAData = derive2 { name="ABAData"; version="1.16.0"; sha256="1mv8xvpb2086rnrzclpmb6wjfj68hyilx5k3mcwbkvgnhfn4j454"; depends=[]; }; + ALL = derive2 { name="ALL"; version="1.28.0"; sha256="16fq2bgp9c56mmc5a7y1wrfdak6fympmfr6yi7dzqsinigf1m17g"; depends=[Biobase]; }; + ALLMLL = derive2 { name="ALLMLL"; version="1.26.0"; sha256="0yv9wyq5q0dmwl9cj0rkncklsqa4il3a1vd2mvi9sr8rn4nrvkmi"; depends=[affy]; }; + ARRmData = derive2 { name="ARRmData"; version="1.22.0"; sha256="1s8cy24gjawi01x84lliir5101p49s6dbx5gnhl5ymsz60jpbpix"; depends=[]; }; + ASICSdata = derive2 { name="ASICSdata"; version="1.6.0"; sha256="1b14w929z75q4ihavj642sa176cj96m629yd9ga1733m8gj8hsg2"; depends=[]; }; + Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.22.0"; sha256="18n2gchvpaspdgpzdr9b06y96zmhkyprn3s4xr2pa140z2518sgx"; depends=[]; }; + Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.20.0"; sha256="0f4gqdhwn2n2gchwfxxylajps4ghj0s0q72schzxjvrd3p10rik4"; depends=[]; }; + Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.24.0"; sha256="1qy0p6ndva9j3lbfnpn3619x6kyyjbnbyw7qb4bdk6nfq63ddbk6"; depends=[]; }; + AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.24.0"; sha256="07i5ww735ixwiyahqx2r09xymvs23ni0vvbjmj0vryy0g247ix9s"; depends=[]; }; + Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.24.0"; sha256="0zzrx1bzg684hz7hvvf3dlvrc1jp2yi3jqy4yp3z4jn6vz6fnzb5"; depends=[]; }; + AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.26.0"; sha256="03gwffv5xjcm4zyp3rmfzqix6si5pyjwqxg4bq7w4pn7ayvn2ls4"; depends=[affy]; }; + AneuFinderData = derive2 { name="AneuFinderData"; version="1.14.0"; sha256="1ar2n45bhns0m651p6xlff5ja56s2a906c01qsyza348pjh5fmi7"; depends=[]; }; + AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.16.0"; sha256="11gz0wwbfk5v3kksw1bgl3vvqna4qcys9bs6x3sp4gffgm794lz7"; depends=[]; }; + AssessORFData = derive2 { name="AssessORFData"; version="1.4.0"; sha256="1wcgkn20iw2i914zyyndhan65biwcj2a9maqkx0w94h99fzdrjh7"; depends=[DECIPHER]; }; + BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.24.0"; sha256="1ykfm4w5dgdq5f6k807ma2fhchnqfrm1z35wvm8v0203amqbgmd2"; depends=[beadarray GEOquery limma]; }; + BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.6.2"; sha256="1ylbywkf20mgprbijxvxx2dfs0y8h3h10kg05xv0f7dkbaq6wlnw"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; }; + CCl4 = derive2 { name="CCl4"; version="1.24.0"; sha256="1bsrk06hbfh1fp5vqjzcn91y5bjj726040809hql61z2iz9r7269"; depends=[Biobase limma]; }; + CLL = derive2 { name="CLL"; version="1.26.0"; sha256="02h018zwkf357fa7rj94dz5lf8vl2synv4ngwf03q6gh7yggr479"; depends=[affy Biobase]; }; + CLLmethylation = derive2 { name="CLLmethylation"; version="1.6.1"; sha256="07fjzchdh4rf4dbqx54x2gq0a4jhikifqq498asv5ld0cjpvvljx"; depends=[ExperimentHub SummarizedExperiment]; }; + COHCAPanno = derive2 { name="COHCAPanno"; version="1.22.0"; sha256="07afc6cvbn3445ib68968wm9dqby1imwg8s30n2l91y94ak9ny2c"; depends=[]; }; + CONFESSdata = derive2 { name="CONFESSdata"; version="1.14.0"; sha256="04nzyv424fnwgr658yvwm80q1vmn66sqm0c2bf8dppdx86xm12xx"; depends=[]; }; + COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.22.0"; sha256="0ahifads1fird2rjvar8xqwfsn6rlq42p7dpa60ybhiyn4wl054w"; depends=[]; }; + COSMIC_67 = derive2 { name="COSMIC.67"; version="1.22.0"; sha256="0sick7wgv241bdp6f7828psfbzfdig2rqzdwf2qhmmflkdxd81cb"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; + CRCL18 = derive2 { name="CRCL18"; version="1.6.0"; sha256="0m3bpivjl1lgj7fpkqlg05cj9mvwpqrmd806jr9hfjh6xksd5c4q"; depends=[Biobase]; }; + CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.18.0"; sha256="0lzlxynbi66vnz8nisag88mcjfhmxwbaj2ghj65xf7lkb3cfr8rj"; depends=[Cardinal]; }; + CellMapperData = derive2 { name="CellMapperData"; version="1.12.0"; sha256="00yr36qv4mz0rbsdw9zfll8g915w5d41ys1kydpgax52cl0s68ip"; depends=[CellMapper ExperimentHub]; }; + ChAMPdata = derive2 { name="ChAMPdata"; version="2.18.0"; sha256="1p0i8a1akx6jmlk7a23f0hyzmlfychm6lkqzm5j2ygvdn20ylq2v"; depends=[BiocGenerics GenomicRanges]; }; + ChIC_data = derive2 { name="ChIC.data"; version="1.6.0"; sha256="05lqwv54032css4q4qigfi9bbq0vzkxd8hq41bk3sg0xcxiz7wwh"; depends=[caret]; }; + ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.24.0"; sha256="039wqv3qnsycw7zicf2ab03bgld8n0543iwc48hx90ybkwzpla5m"; depends=[bigmemory]; }; + ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.10.0"; sha256="1g4lhhprd5453q6q2m56x6ry8isx3rw08xdmvlq8mbxp0f86jwii"; depends=[]; }; + ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.24.0"; sha256="0frnrihjfmmks0vz30ynz8iq02sb40v6ncwc7hd9a1mhdlw2azb8"; depends=[affy hexbin limma qvalue statmod]; }; + CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.2.0"; sha256="0k4gdr9xgljb7ksbzyypdlagn2bs7v3znr053pd3zzlsc1wnrzj3"; depends=[]; }; + ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.22.0"; sha256="1jk85r0k4bn2l8sg6p5l3id4n559hkd1pyfdy2qw5x3jqz9m3bc2"; depends=[]; }; + CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.4.0"; sha256="01vb8f9ady8lnzhxg39nf1xgsjsv096bp3jdzb3q4ymw6qh8v95w"; depends=[ExperimentHub Rdpack]; }; + CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.18.0"; sha256="1da58cyfgpvdsysharn2d8xmjjvsgb757q89hasajwqn1fnf5bcd"; depends=[]; }; + DAPARdata = derive2 { name="DAPARdata"; version="1.16.0"; sha256="0r2dzhzdsfnxalq9g6gd126vavjcs30jddpv8yczqpz3rzg8ly1a"; depends=[knitr MSnbase]; }; + DLBCL = derive2 { name="DLBCL"; version="1.26.0"; sha256="04wjzzmjjh0f8idhj7hpr9vld04ilsa17iy70k5gqyv3fq9188z2"; depends=[Biobase]; }; + DMRcatedata = derive2 { name="DMRcatedata"; version="2.2.1"; sha256="1z5vyaj7vv0adsb2bjx0mrpi1wdkx7jsbgsahvvf37g895blibsy"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; }; + DREAM4 = derive2 { name="DREAM4"; version="1.22.0"; sha256="0bcby3wcwvqigldnv3kcgkds6a79f1qw18r080a9ajazmqi1fs0d"; depends=[SummarizedExperiment]; }; + DeSousa2013 = derive2 { name="DeSousa2013"; version="1.22.0"; sha256="1v4plygbdja5rnzavikbi3ks60zannkv3ld7w286n41dc9kwdmkp"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; + DmelSGI = derive2 { name="DmelSGI"; version="1.18.0"; sha256="016q7n5xqyz8iawajgjng750drrddnz7y76k5bs76k8g7k1krwnb"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; + DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.24.0"; sha256="1bc6mipbzpbjfd3r5ll62903avmwm4vc7s2nzx23a8xg15agmnbf"; depends=[EBImage]; }; + DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.22.0"; sha256="0g201qrvpxv1b8fx2xl6r3fai2sfv54s3y65n86q6mi8jf49m3lx"; depends=[]; }; + DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.4.0"; sha256="15zs1pinqbmbbwap8qpp1lkp2yva1mks6a1lp8yr8i8g3mkgjgrx"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; }; + DvDdata = derive2 { name="DvDdata"; version="1.22.0"; sha256="02rr69i3xkal2a551f56703lwzwjqzr50q0i6srlyri7ad2r8bix"; depends=[]; }; + EGSEAdata = derive2 { name="EGSEAdata"; version="1.14.0"; sha256="1vvvnrq58ilzr2rkjqky1n4f87f7k4grzgny58yms9wkz213ly9q"; depends=[]; }; + ELMER_data = derive2 { name="ELMER.data"; version="2.10.0"; sha256="0ffvvmyvyc6lalmwslvgmipjj6kvww459hz63fb047jc9z9m6g1f"; depends=[GenomicRanges]; }; + EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.24.0"; sha256="19yqjlh0x5w5590r63ykbpx6vbvcwsjfqq887vcywbzd5ky4w46q"; depends=[GenomicRanges rtracklayer ShortRead]; }; + FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.22.0"; sha256="0kb77dmyg1ry5dagrjpwg59icr79kxvn7dw0jm6420pf4axnr99v"; depends=[]; }; + FIs = derive2 { name="FIs"; version="1.14.0"; sha256="0sqdbyp9g5g6craxkbgyrmirr37lr9f3a2gw27m81mad2v3ajia4"; depends=[]; }; + Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.22.0"; sha256="119wab4xf1jldvyqhckkkky9l94hp9192c70mq4wm6mvqx3i11wi"; depends=[Biobase gplots limma VennDiagram]; }; + Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.22.0"; sha256="0j3hwx51rj8alfnwyfzvnbkjswwxj6jiysjq42fwp6z6ggpjn3f7"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; + FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.24.0"; sha256="0i93kgi1y3kppb08zyzpwphldn6j8511ca81lg8bsx4m0v20iihp"; depends=[minfi]; }; + FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="1.4.1"; sha256="0b6823h8j8f72fpf6wj3jdhk6zwz6qk3bmzbkiiqbw9fj6s36gvw"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; }; + FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.14.0"; sha256="1m1r0kb4zk7687mh17aqggv5fidzv2igx20j2bclmwffv64mzw3h"; depends=[minfi]; }; + FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.2.1"; sha256="1dzkcsn5lhmhrvi9g5mqlm5zw7w4kcm3vfrzyk61yhdhl4ysxz03"; depends=[ExperimentHub FlowSorted_Blood_EPIC IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; }; + FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.12.0"; sha256="1swpqi2626j8nyd2iilqx7b6qjjjr1qc9lamjgq46l06jb80gr79"; depends=[minfi]; }; + FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.22.0"; sha256="0jbwx5pd8g91qg80sibizpi6cnsv15x5w5675zxgj2l8v00dzqjx"; depends=[minfi]; }; + FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.22.0"; sha256="0hmrazvyh8yfwz9g23pfaf3y0l929h4yv1vmcrs44wbdva2jijwr"; depends=[IRanges rtracklayer]; }; + GGdata = derive2 { name="GGdata"; version="1.24.0"; sha256="03094j1pjjjb5z4qplsxlazca5vmpcifh154nbxp94sc7h5yskyi"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; + GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.4.0"; sha256="0d31pn4ra2nr5gk4bszyqakj8v1sya10aj2n044gn5zsspf4dkaw"; depends=[]; }; + GSBenchMark = derive2 { name="GSBenchMark"; version="1.6.0"; sha256="0rhgidjirz9i7n1f60jk1injifm1nacak29qz0wsw6vjwibr47sp"; depends=[]; }; + GSE62944 = derive2 { name="GSE62944"; version="1.14.0"; sha256="1p31cwwa1w01d2hxs2r9gsmsdfi1zr3wa2dsci9jwhxvm79hj5wz"; depends=[Biobase GEOquery]; }; + GSVAdata = derive2 { name="GSVAdata"; version="1.22.0"; sha256="0db7w860i98rrwramw8dp2p1a022a4hxqc71ypdhxcli5718hh7c"; depends=[Biobase GSEABase hgu95a_db]; }; + GWASdata = derive2 { name="GWASdata"; version="1.24.0"; sha256="0743q6ak2ncda0l1p6xd7g11052nz2jp3mjk0h89yklan931q06j"; depends=[GWASTools]; }; + GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.14.0"; sha256="0w44fghds8l2frdn2z2kyzc94ndr2pqd2lashsp4vradfpy5fvcm"; depends=[]; }; + HCAData = derive2 { name="HCAData"; version="1.2.0"; sha256="0gikkfizjh7k3rvk13rkpdf3wshajd9x146awk09syc4mm70p0sb"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + HD2013SGI = derive2 { name="HD2013SGI"; version="1.26.0"; sha256="04wl1yjc5lg5n33a0d9gxigx56g5dks1sh8x3ajkx73579ikwj6j"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; + HDCytoData = derive2 { name="HDCytoData"; version="1.6.6"; sha256="0zy7q8n6nh06y63aav1q5zvd3yhqxpn1rvlz8k3i24qjs192pi3c"; depends=[ExperimentHub flowCore SummarizedExperiment]; }; + HEEBOdata = derive2 { name="HEEBOdata"; version="1.24.0"; sha256="02dff6na4wq5pz7yh6w5bk407ydnlhcmzpxh5pa7gdrhsi94llyy"; depends=[]; }; + HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.26.0"; sha256="0426jz2r1lhn660lvkmqpfkg2yrramwj5kji547rq2c8flnhyjjx"; depends=[]; }; + HMP16SData = derive2 { name="HMP16SData"; version="1.6.0"; sha256="13k7rvnxykapsy5wnwl3k25ivb7hm51cv1hs5yry2jkdp0vpvmjr"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors SummarizedExperiment tibble]; }; + HMP2Data = derive2 { name="HMP2Data"; version="1.0.0"; sha256="15fxfwp0gi2hppk4v2gnk71inlqrw1f9d975gzf41iqcb10wjsax"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; }; + HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.6.0"; sha256="0mxsa8k4vxiimlpwc3y2p1n05wvp68y05pddb82yy15pdaghs2wj"; depends=[]; }; + HarmanData = derive2 { name="HarmanData"; version="1.14.0"; sha256="0rs7mjyg2mg5pmkl8529x9mwq8xl6fp3ngr6snfh478435lfjg23"; depends=[]; }; + HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.8.0"; sha256="1p1ghmcq5l1gqr8g3bw1n320dn6fv5ii9krp7vnqxx90igww0akn"; depends=[ExperimentHub]; }; + HelloRangesData = derive2 { name="HelloRangesData"; version="1.12.0"; sha256="1qbvj80gz4sbhg4h8r8hsza4jl06kmn9y91n1h48b0fvsxgk0zfn"; depends=[]; }; + HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.6.0"; sha256="0z568y0rqsmc0i2gjfg1fycsdyh1nixyk1cysr2c2714ijqh9ryi"; depends=[]; }; + HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.22.0"; sha256="1vq7q1ih9njvjfp7j1dmydfkdp9ch8adqrrzp17vi0nj0m2j9qdg"; depends=[]; }; + Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.22.0"; sha256="1n5li9q6s2xzibcl5vnmzx5jbyd2li37k8awm2fbz9jcs0ldw92v"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; + HumanAffyData = derive2 { name="HumanAffyData"; version="1.12.0"; sha256="1hwl32cp5hvfcq7740g60wzm1b99qrzb5vbmll8mh89dwcsr00n4"; depends=[Biobase ExperimentHub]; }; + IHWpaper = derive2 { name="IHWpaper"; version="1.14.0"; sha256="116kg6pffw5zh7zfmbgg8ar8jwwfxr806fs8kwwh9f0w9qk6s76g"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; + ITALICSData = derive2 { name="ITALICSData"; version="2.24.0"; sha256="1w31z51ipcfa7yj8pfcx2ff2rqxsqn17fydy6nmap5zmcbn2cbq3"; depends=[]; }; + Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.22.0"; sha256="1jld5lqb5dmy5yjq64rjymq9n4i4r5zjz230r6vyi1vka26isv1v"; depends=[]; }; + IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.24.0"; sha256="1nzzmdv212c83hi8l6swzk9dpq1v6xr5z5721zdckrxcl45zzccw"; depends=[]; }; + Iyer517 = derive2 { name="Iyer517"; version="1.28.0"; sha256="1w7f1j1wh087c4f7ssazybv9mg30vy2cy5ydgdzq0h7n49cpcq1h"; depends=[Biobase]; }; + JASPAR2014 = derive2 { name="JASPAR2014"; version="1.22.0"; sha256="0v6hm0sq2mri1b1ylsqyvffr1b1xadc730v0g1a34madk7ih9lg2"; depends=[Biostrings]; }; + JASPAR2016 = derive2 { name="JASPAR2016"; version="1.14.0"; sha256="1vd7zii62k47av9yqw5zqqzrr79s93xfdvyi4hp9qfbxqlkz2jr0"; depends=[]; }; + JctSeqData = derive2 { name="JctSeqData"; version="1.16.0"; sha256="10kp47cpkw01rnz817av3iz6j8zyjns6k54wd2mni18lhscxwq9f"; depends=[]; }; + KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.6.0"; sha256="1ixx5wvyfcah61acra8g5s16ibl514qasx5yw99asw88v2w58mmi"; depends=[Biobase BiocGenerics]; }; + KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.24.0"; sha256="1mb99j31zf5l0279r1qfayr4wk56ar4q6al55l57lb5rd9x8wlqb"; depends=[Biobase BiocGenerics]; }; + KOdata = derive2 { name="KOdata"; version="1.12.0"; sha256="1zwjxwrh75ymj2ln2nwm82ih2zk8rc0nz3pagcypawmci54fzpxb"; depends=[]; }; + LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.24.0"; sha256="1ar4v30a2bhcfcw2f2hpirwpmdiik517gj84j5l1n1wz60xh5xd1"; depends=[IRanges KernSmooth]; }; + ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.18.0"; sha256="09dsm8xwh1lzc65i4ryj928yfispdlzhbxmipkpv18dq07nq21km"; depends=[methylPipe]; }; + LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.22.0"; sha256="0dwf55y41dyv78hkzs3zs2243hh1la98n7dz4iq9jcy2r8gn42d4"; depends=[]; }; + LungCancerLines = derive2 { name="LungCancerLines"; version="0.24.0"; sha256="1l3pp2klcmd0di9myqa18qiyx23wkq0wai452k38ww9phjc15min"; depends=[Rsamtools]; }; + M3DExampleData = derive2 { name="M3DExampleData"; version="1.12.0"; sha256="045pqphqi3zbnibb32c8zwhg29ikvjrvcxrn4jbblp0162kv3v87"; depends=[]; }; + MAQCsubset = derive2 { name="MAQCsubset"; version="1.24.0"; sha256="11xbyj2320x6ng3yai85z6qn1awfpc3zmi0slg0jsfhf9y7bry0h"; depends=[affy Biobase lumi]; }; + MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.24.0"; sha256="0pg14y6p9589s1w82ngm64k0a272mwbqrwmfmfqi05mh1kg72z4f"; depends=[affy Biobase]; }; + MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.24.0"; sha256="129rfiz1z2wn3xvj0qqvcfwwkji60grdjwx14w11i30rg1waa5vi"; depends=[Biobase lumi]; }; + MEDIPSData = derive2 { name="MEDIPSData"; version="1.22.0"; sha256="08a8zqpkxh0vnw6yywd7m2y4c0crc5kamijjy4mvrcdrn7yvmf07"; depends=[]; }; + MEEBOdata = derive2 { name="MEEBOdata"; version="1.24.0"; sha256="05cp488r69wvqmk3znghrpnwiaq0bsclgffkrl7ab5r57128vb6g"; depends=[]; }; + MIGSAdata = derive2 { name="MIGSAdata"; version="1.10.0"; sha256="0kfy63v20qyfgk9w0ymszak89mmq6fgm91g9lkbqxrhzv36vvw7c"; depends=[]; }; + MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.0.0"; sha256="1pwqgxvkdhc0gk99f0c4kk1ypd3mlcm8z9k1sz6yia139yjz3fq4"; depends=[Rsamtools]; }; + MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.22.0"; sha256="0kl23870ndd7k6gn3svcgn7hz7ijwpnldhwsa1hza8kxvakqnwir"; depends=[]; }; + MOFAdata = derive2 { name="MOFAdata"; version="1.2.0"; sha256="0zpdwmxhniy7jqxfl1g019kc265ixs43s957l3va00r31hh6pl27"; depends=[]; }; + MSMB = derive2 { name="MSMB"; version="1.4.0"; sha256="0sfrbwsfj659k0426nlcwlf13rds4vj0wpcz3wrhmvzp4gp8y913"; depends=[]; }; + MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.8.0"; sha256="00f25dr1sdxz0s8wdzmjp6sxid587kvxvx24ln1x088381kh2awd"; depends=[]; }; + MTseekerData = derive2 { name="MTseekerData"; version="1.3.0"; sha256="042g0yg4ywpz0a1ajp5n8ns2qjhqaq9xrh1gljdjhs25r6pcybb7"; depends=[GenomeInfoDb GenomicFeatures GenomicRanges Homo_sapiens IRanges MTseeker VariantAnnotation]; }; + MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.6.0"; sha256="0wjjgnab1cm4vbf73lmyx0ybl8z2xrq8106abl88hi2j11vvyqjq"; depends=[]; }; + MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.6.0"; sha256="1v40pjb9bkjj0zhba8mpmikqzdygz6dgy50g2257bzx3vlw2pn6y"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; + MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.6.1"; sha256="17p6sxvifla2fp3011cqfaygjkxjb354x1gc99frgqjn03baf96z"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; + MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.6.0"; sha256="09s7vqabh1kf51m3fvxbgdvmg9jakrp2x4jsi0lic5399ia7ixn5"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; + MethylAidData = derive2 { name="MethylAidData"; version="1.18.0"; sha256="1qz2x0lzhpg6bag5s387ynw948d3c4vgljizfm1jg5q80nv8rh1p"; depends=[MethylAid]; }; + MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.0.0"; sha256="1238n954qbcy381rin127nikqsc4yazv7aix7yfj3ynswrn9zlki"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment]; }; + Mulder2012 = derive2 { name="Mulder2012"; version="0.26.0"; sha256="1i22jkxcv5fi3bhm9ff0gh4flgnvh4qkp8wzn9g5rfjawnawpr36"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; + NCIgraphData = derive2 { name="NCIgraphData"; version="1.22.0"; sha256="1jkkglhpqhgfmplz4ij410mxvkqgjfsgyn7my10bi7w10shfkqnr"; depends=[]; }; + NGScopyData = derive2 { name="NGScopyData"; version="1.6.0"; sha256="0pdag1wqbhg8rghs71va6rhnzwl2jwjjihlplz14f8i26h4k5cw4"; depends=[]; }; + NestLink = derive2 { name="NestLink"; version="1.2.0"; sha256="1cax1r0hlqh7ir6v716z2dl8rg9h9jh4mdm85hy9g3mwia8blmvz"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; }; + Neve2006 = derive2 { name="Neve2006"; version="0.24.0"; sha256="1bycs7n28gj348lxqcbvmp4ckicf7h28wnbly92r2snzkgia8al8"; depends=[annotate Biobase hgu133a_db]; }; + OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.4.0"; sha256="0g0p18iss8cnafzzm167sfjxzkryhps8xicfdda0fjjjjal0g5ng"; depends=[MultiAssayExperiment]; }; + OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.8.0"; sha256="1jq10cfrjjsr1bcj9v6ry2k25j7zyqfzn467k5l8x5dmfw7ix7y3"; depends=[rJava]; }; + PCHiCdata = derive2 { name="PCHiCdata"; version="1.14.0"; sha256="0rfll3i9k4ylxfchp6ah1vvhf39287dkz4hj44bpmxykzyddp740"; depends=[Chicago]; }; + PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.26.0"; sha256="0b5rs9vz7bi4fp0pwr2mxrhvghrgzkvs5fcdy98sb1vzps4gchsy"; depends=[affy annotate Biobase PREDA]; }; + PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.20.0"; sha256="0c7cbd9hq59ggw5x4q8x1s372p4nwkrypafcyx9kvlvcsyhcf1bz"; depends=[PWMEnrich]; }; + PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.20.0"; sha256="111s8wl6crzxbm86h3hlpaqw3x01ywf05c2zh83m0dmjympw88jj"; depends=[PWMEnrich]; }; + PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.20.0"; sha256="0fhq420zi9qbvpspg44yxsxckhlc43snf8hix85x9vhinmg1j73s"; depends=[PWMEnrich]; }; + PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.14.0"; sha256="18r0x2vr1da2rcqjga1i8f45a1afzj5as2ay8mmf3s8v5m7qm5za"; depends=[]; }; + PathNetData = derive2 { name="PathNetData"; version="1.22.0"; sha256="1qchahypywlqf5swwqxwlvhsqagc025pijgsmvm22m73gxzmymif"; depends=[]; }; + PepsNMRData = derive2 { name="PepsNMRData"; version="1.4.0"; sha256="04hws2wcf928sm5i0kxalpbcb0il7c5whssdw2nqnrghrnr7iwaq"; depends=[]; }; + PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.0.0"; sha256="03yljc9k2d26vjvzngalk5jay7pbm06rr1r171rfi7gvg9b3q563"; depends=[Biostrings ExperimentHub]; }; + ProData = derive2 { name="ProData"; version="1.24.0"; sha256="0swgyhc4pggfl1sr7fkr50kr66rzlcqvqmvfayldrw70mzh2682z"; depends=[Biobase]; }; + PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.12.0"; sha256="1z4zjqg2l7dvipsl6bz69hl8mkay1462h4vxs0zy372pg7q8can2"; depends=[CAMERA LOBSTAHS xcms]; }; + QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.16.0"; sha256="0gzyn1sg7pp8vngrdgz1s7r3dak11z700nx714wmihnj4kgsgsg2"; depends=[QDNAseq]; }; + QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.16.0"; sha256="1pyly8p9azjcz1c4rj0r2fdk9brd786mz6faaaviwy64c7ksrsj4"; depends=[QDNAseq]; }; + QUBICdata = derive2 { name="QUBICdata"; version="1.14.0"; sha256="1c44a7gs6v2jqxhafns9rnj7zgf97b0lxsfgxk8idi37nkpcdi4k"; depends=[]; }; + RGMQLlib = derive2 { name="RGMQLlib"; version="1.6.0"; sha256="1bd2zp8fhgf8ymixn7nv0q4i3ydsvls55grw1n7a1axr0lajkz7d"; depends=[]; }; + RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.22.0"; sha256="0d73c15b1kwvns9kblmqhrn07cjiazrl6mnms3cq79yi9jgzcw8v"; depends=[RIPSeeker]; }; + RITANdata = derive2 { name="RITANdata"; version="1.10.0"; sha256="0qyv5lpdjv62ql1wz35xnhms13ipir3ic42p00v78fqnzkyax8fs"; depends=[]; }; + RMassBankData = derive2 { name="RMassBankData"; version="1.24.0"; sha256="1cmmqhj1siff0l1ky6pysx9dlp7bm76wr2pd0x89zaayrrwy49hm"; depends=[]; }; + RNASeqRData = derive2 { name="RNASeqRData"; version="1.4.0"; sha256="1am1glxcg7vgski1fgvw2nnpwdibpjndq110rgwrvigvkbqrg0n5"; depends=[]; }; + RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.24.0"; sha256="0sijk7dhgkrh01yb2inl067gyiy2f737chwdd7zd7dd5si0vbw4v"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; + RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.0.0"; sha256="15i4srk594sxqwc8a6z7n1m5iqga5spaqvcc51frhsn9yna9wl5h"; depends=[ExperimentHub ExperimentHubData]; }; + RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.24.0"; sha256="13qx3xiyzf5v74jmqvn0ylr6yd0qwsi96immcszrhjwv3iwqq2xd"; depends=[]; }; + RRBSdata = derive2 { name="RRBSdata"; version="1.6.0"; sha256="0nms1h6hck6l6a742b00xrya1bybj4yqazb531a2hymzljc8g1kw"; depends=[BiSeq]; }; + RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.14.0"; sha256="0h8x0kk1cl648s36k57dshka89wrmbz7q7p5khvdrk01nl6s23rr"; depends=[RTCGA]; }; + RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.14.0"; sha256="0jwjax6m9l0m16jidiw3vl7380qwmlqki0b907a6482gby6863mp"; depends=[RTCGA]; }; + RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.14.0"; sha256="0n0f1cz4p34l59kd0g2xkajljf5bq6xm591kkp5jb24mv0i0g3ha"; depends=[RTCGA]; }; + RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.16.0"; sha256="1cijm9vqcl4vxahnii8xkckq69s50b53gya7x06v1nfp2614xr02"; depends=[RTCGA]; }; + RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.14.0"; sha256="1zqn72wvv6iylzqgj00ryj88hmzyw5rkp5sdghj4ivbvq6xjh0kl"; depends=[RTCGA]; }; + RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.14.0"; sha256="1idyscwrqs2scjan3hpy134jkzqingclqfjrbfy3ims3il5ll37s"; depends=[RTCGA]; }; + RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.14.0"; sha256="194p8zr5jcpfbcgfia32p24lbgz5qk1zlg5axlgxr4ac0fhvjss3"; depends=[RTCGA]; }; + RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.16.0"; sha256="01pjarhjq1jl0lnzajqvryyvzdz4dpn2gx68g2y4pszi6s3f0gyw"; depends=[RTCGA]; }; + RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.16.0"; sha256="1pdd1r18vaanhvqgm1dckcb4vmm3l8l89jsld2jy7sangbavpn13"; depends=[RTCGA]; }; + RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.6.0"; sha256="0vw1d4n01kz0lsymbacqm8wvb2ivhnxljx04hfy0sba3p3y9hxhf"; depends=[Biobase]; }; + RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.6.0"; sha256="0jx8y54c4m8a7i8j8m9r5m9bl3lcdknnwllbkf5njdfy24a20154"; depends=[data_table]; }; + ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.0.0"; sha256="0nfmh765zkni3qslhs86yyfqf2c5hdva7avndahv7d3yai4g60d5"; depends=[edgeR limma ReactomeGSA]; }; + RegParallel = derive2 { name="RegParallel"; version="1.4.0"; sha256="03rm37wbq4bmi8kmm97qliyqrzyyhkkh70zv2lpclmmw7afcwh4z"; depends=[arm data_table doParallel foreach iterators MASS stringr survival]; }; + RforProteomics = derive2 { name="RforProteomics"; version="1.24.0"; sha256="1cp7vyjccknyd58xwng7pbln4pk0idymrr657va5hbnclv17pqds"; depends=[BiocManager biocViews MSnbase R_utils shiny]; }; + RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.18.0"; sha256="087p4gydzsxp6fnmlxsaxb6542nb2bqvzf0dv098ypms20lvqhn5"; depends=[GenomicRanges]; }; + RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.18.0"; sha256="1p4ppxsgk1041gq49gpqiw7yz5l16qjx3sijvjcxywqasy2ckm71"; depends=[GenomicRanges]; }; + RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.18.0"; sha256="0iq41bi87107pk3qh3z4j15gsyfj5vbbplna71zkvjg2w65jz853"; depends=[GenomicRanges]; }; + RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.18.0"; sha256="0755bfmd30ab0gw1vyzmar1na3xm3j5dafvvw2mpg1b7pz8y9jyg"; depends=[GenomicRanges]; }; + RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.18.0"; sha256="1lg98j24arf104a0hnafmpd6hxbnz0fvq4mh4jb36y8392nrjrag"; depends=[GenomicRanges]; }; + RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.18.0"; sha256="0c2v1vrwx9ryb6zc37f19rx4blq1dqf5hfqdfsva1k484mny6nh2"; depends=[edgeR]; }; + SBGNview_data = derive2 { name="SBGNview.data"; version="1.0.0"; sha256="1ir98sfcsmsxh8s20z93qwlwv8hqx445s3pnb9bxnsni6zhddp6b"; depends=[knitr rmarkdown]; }; + SCLCBam = derive2 { name="SCLCBam"; version="1.18.0"; sha256="0mlv8lppdfr2l4l4af764q1ckm01x3fvrvp3n29wny691z6h47ym"; depends=[]; }; + SNAData = derive2 { name="SNAData"; version="1.32.0"; sha256="0nhxkdr1hxvp8b6bciqnjch20c5wg072wvcqsdy4qxh93s6kahwv"; depends=[graph]; }; + SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.22.0"; sha256="0rgcmzbbsyqrlxnw2x1aavvlz587x2362sg4db0w2dwc0hpi0v6i"; depends=[]; }; + SNPhoodData = derive2 { name="SNPhoodData"; version="1.16.0"; sha256="16flpjhksfqwjx14129331mjjjkv9rfmzlyddvpfhlqdcsplzgcg"; depends=[]; }; + SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.18.0"; sha256="0n421m4zrw50afxal8sa91wahc84mkkfifnf3acw9w9z1dqakm0c"; depends=[]; }; + Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.14.0"; sha256="08liqg5i7565j9y1i2pb1zs8i4al57f9mfgjvxjccak6kjy4z8zf"; depends=[]; }; + SomatiCAData = derive2 { name="SomatiCAData"; version="1.24.0"; sha256="0n2symnwiidmc2pw8w2xs3ppaxs1hbqac7gkqcs0j1japmif6nm4"; depends=[]; }; + SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.22.0"; sha256="0a4390vn69bhk29fca2zj3f4j26s5sdsiiai04h2wnvikj2pcmjx"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; + SpikeIn = derive2 { name="SpikeIn"; version="1.28.0"; sha256="08aw67jg6sgwjrv8pjnp139nl9xf0m8fvn7sdpy8cx19ia8l3ris"; depends=[affy]; }; + SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.26.0"; sha256="08ifkqjpqkcfyr8hfi6fz0rnil8qqafk8amps0r7dqha07hsv3pk"; depends=[affy Biobase]; }; + TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.22.0"; sha256="0qkw0ax17n9zs3n9gx38dpvwpvg93j4xxcqgpmcc76ajvmp1pa44"; depends=[Rsamtools xtable]; }; + TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.22.0"; sha256="1v947in2f5f6gp9298yiv194x2i7xhsnwgrvp2y06grgm19xb1z4"; depends=[]; }; + TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.10.0"; sha256="1sp01x69n05lrknzy30n1ym6hfvj8blwnpnvhlky0z24c8aarj3l"; depends=[SummarizedExperiment]; }; + TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.6.0"; sha256="1dyyr1h4i3v44l86lqsb284gq7vwxy7gvprcsgw29pp35pxpfxx4"; depends=[]; }; + TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.6.0"; sha256="0cqlhnmdzlqhymzfmsvl9f352iywq48i9jbzy3saaviwjnq3yxyw"; depends=[Biobase]; }; + TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.6.0"; sha256="1arc3n2bpzjrw2y1p5fj3gi66qysc3w9g7ywdsdsbf1cq3h3sbys"; depends=[Biobase]; }; + TENxBUSData = derive2 { name="TENxBUSData"; version="1.0.0"; sha256="07v2hz26jhrlh2bs1bnrk12cp7ldgq63mnsyvh392z1s9km0yyhg"; depends=[AnnotationHub BiocGenerics ExperimentHub]; }; + TENxBrainData = derive2 { name="TENxBrainData"; version="1.6.0"; sha256="04vrmgp9n1hd1xlx29596d253fwyi4mpalmi1ilqc7khki77pwd3"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.4.0"; sha256="0vwlk46dnwyyy16118rn97311mfllk8jrh05m3p779z670d0va0m"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.4.0"; sha256="1la7mk4rs0m1ql860rr0gwqpirsb29kwax1633r35z671a6rfgmp"; depends=[ExperimentHub]; }; + TargetScoreData = derive2 { name="TargetScoreData"; version="1.22.0"; sha256="0g0asxfrfky5nq6lr99cppwkg9gj1i6v3zy9v379pb4vmp1r4gkm"; depends=[]; }; + TargetSearchData = derive2 { name="TargetSearchData"; version="1.24.0"; sha256="0fpfqglgd07pdzriz2vhay1i5hkdzkhmn96f12b15jmwrx1y5ipa"; depends=[]; }; + TimerQuant = derive2 { name="TimerQuant"; version="1.16.0"; sha256="0swmnal3ns3n4xr7qsb83ig4sx9ynag6lmhy861njfb9s3ybaphg"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; + VariantToolsData = derive2 { name="VariantToolsData"; version="1.10.0"; sha256="00bk19fhxg9fgwfivsn9z7kmqdjbmrawa0m9h6n52hdayyv1645p"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; }; + WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.18.0"; sha256="08520csd9lz37m0bn1l9fd14z6gnhrl784lvfr4mxyp1lcnj3s22"; depends=[]; }; + XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.24.0"; sha256="122mh8nwfcq7i2k78asgssf43s4czsqnbl6bqi05dv513z2bwr86"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; + adductData = derive2 { name="adductData"; version="1.2.0"; sha256="0vadizqvla3dhc0c5ig97gd0v2spfg0mh27x2rn9nd1k8sadc65j"; depends=[AnnotationHub ExperimentHub]; }; + affycompData = derive2 { name="affycompData"; version="1.24.0"; sha256="1x5ccx0b1mvzd9kr3fg0mkkdqb42c7xp795s1325xyh7zigq1k3b"; depends=[affycomp Biobase]; }; + affydata = derive2 { name="affydata"; version="1.34.0"; sha256="004m8bzayg9sgqc2qi288yb2y52k1bq0bkapsa15zg6fcjqa8ngz"; depends=[affy]; }; + airway = derive2 { name="airway"; version="1.6.0"; sha256="0blyfgwczdbj6c180k45b08pv6lwfbzz6n782lsz7cywx2fqbyhp"; depends=[SummarizedExperiment]; }; + allenpvc = derive2 { name="allenpvc"; version="1.4.0"; sha256="0y1gz4364gzkjdrkqcgszxqzchhyg3ipgs4kwn8mf9x21hnacszz"; depends=[AnnotationHub ExperimentHub SingleCellExperiment]; }; + alpineData = derive2 { name="alpineData"; version="1.12.0"; sha256="1cf5ppmds6yx93z2rmfqa8aybg1rz28rzkxmy38i8kmqc9lv1g4x"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; }; + antiProfilesData = derive2 { name="antiProfilesData"; version="1.22.0"; sha256="1m8db6jgpxa88a10byff6shdfdnw6rcwny8xcf4jbrlisir0cl4w"; depends=[Biobase]; }; + aracne_networks = derive2 { name="aracne.networks"; version="1.12.0"; sha256="0cv6p2pf54g0cc1h0azhh8sb41p635r60zz7af61hnjx645gvq6s"; depends=[viper]; }; + bcellViper = derive2 { name="bcellViper"; version="1.22.0"; sha256="088ym3scwbnm2jlkgvjmxx1y13qa0hh02c773ndz5z08v2b4041k"; depends=[Biobase]; }; + beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.24.0"; sha256="11dqhljpr0zgdidxqdpn98ssvz3yhrlgfdwr46nzfyylrdym8m20"; depends=[beadarray Biobase]; }; + benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.0.0"; sha256="08c8xx97ls1vwipvnsx8apxqhcs0rrlixm07madam7lkk3s12yd8"; depends=[ExperimentHub SummarizedExperiment]; }; + beta7 = derive2 { name="beta7"; version="1.24.0"; sha256="1gdjyxw2ap5il68v94l6vxf75jnzlsp6dyksxhrnckxzspyd0r65"; depends=[marray]; }; + biotmleData = derive2 { name="biotmleData"; version="1.10.0"; sha256="1kf2c3x3s7yyk0wy5p8g8a7h0f33y0648misc7iabiwn0lx7dp84"; depends=[]; }; + biscuiteerData = derive2 { name="biscuiteerData"; version="1.0.0"; sha256="0y6k2vajibjh727ahy6fwvnky8na3bh0dwa0w2rvncr1mnh7qcdl"; depends=[AnnotationHub curl ExperimentHub]; }; + bladderbatch = derive2 { name="bladderbatch"; version="1.24.0"; sha256="1yick6zxsgz8i226ffyxfbi5nlvv19c01ij3dmb81bbj7acn0a2p"; depends=[Biobase]; }; + blimaTestingData = derive2 { name="blimaTestingData"; version="1.6.0"; sha256="0g13p528mpgq6lm03rs7n7di328c2gjfarb4apn7v0hxpf94f5gg"; depends=[]; }; + bodymapRat = derive2 { name="bodymapRat"; version="1.2.0"; sha256="0mlsxa59nq6nswabgi9i2lmzqdz1qw2da1802h8kl18zdiphfsik"; depends=[ExperimentHub SummarizedExperiment]; }; + brainImageRdata = derive2 { name="brainImageRdata"; version="1.4.0"; sha256="0ykldw89j4xl26bnhrkk506q1kxm3g6c0wxsla0ljrd145g1izhz"; depends=[ExperimentHub]; }; + breakpointRdata = derive2 { name="breakpointRdata"; version="1.4.0"; sha256="09h0vmp41ci31pppi86isi398wzdc9nrjqmqrkx82kbz0v1mkh5p"; depends=[]; }; + breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.24.0"; sha256="143wh4n0hcmv08rpz75vbi3qzbwapnqmi05g8smjgpr7m1nxigjw"; depends=[]; }; + breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.24.0"; sha256="13jch65wiyqj2gjr4xjbhr1jpf8yfgxm05ix14xc4z1bygf9xisx"; depends=[]; }; + breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.24.0"; sha256="1nvxrqlwfhx14jj5q1fqwm06vfaxsai4c5ficr32gack9lzf1snc"; depends=[]; }; + breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.24.0"; sha256="19qa9h72drjwcn1pl1d28lnpy6niyf4gpgd9k1vf8mq90y9wynm2"; depends=[]; }; + breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.24.0"; sha256="0i69ynj32xig34b25z3qf2883nbqq0m3r5cls708zf0nh97v5qyn"; depends=[]; }; + breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.24.0"; sha256="1jx30fsflfqvl5psy8mhr0p7vx2dimwm4hmb9l0ar64wr24y6ay4"; depends=[]; }; + brgedata = derive2 { name="brgedata"; version="1.8.0"; sha256="1d4h6a0w325iwjsymywsgibdfamk7gc8cwymbs49cihhnmz0bqdb"; depends=[Biobase SummarizedExperiment]; }; + bronchialIL13 = derive2 { name="bronchialIL13"; version="1.24.0"; sha256="12z8wacqdv31adm898idwzrhh4dlq569ljjxax7m0iihx7yk9j2g"; depends=[affy]; }; + bsseqData = derive2 { name="bsseqData"; version="0.24.0"; sha256="104s1h5s552nyrmbks4z343jxfzshxxddppyhl948f1aly4q22dd"; depends=[bsseq]; }; + cMap2data = derive2 { name="cMap2data"; version="1.22.0"; sha256="0aqhnacyjaixh9brn6vf87yzz99qrbvz8663j712b77c4s97ljsc"; depends=[]; }; + cancerdata = derive2 { name="cancerdata"; version="1.24.0"; sha256="00xkqgly6mlmkqlk4siyi47m6hayyi33sigq99pim7p6baabcz6h"; depends=[Biobase]; }; + ccTutorial = derive2 { name="ccTutorial"; version="1.24.0"; sha256="1ypzf3nsmdaynhr739yhbi7y26sinwnxzm689kdqzsadmkmag0fs"; depends=[affy Biobase Ringo topGO]; }; + ccdata = derive2 { name="ccdata"; version="1.12.0"; sha256="1m2b3aa5chl7kk3ckmpfpirjsnpfrisbd9b79y7kcigqhir8npi8"; depends=[]; }; + celarefData = derive2 { name="celarefData"; version="1.4.0"; sha256="1zrdh5c3q44amqf4b63vnak06ga12dy5wd0j4r3mi1wxg6jl4sp0"; depends=[]; }; + ceu1kg = derive2 { name="ceu1kg"; version="0.24.0"; sha256="042xvgr6vsdfjz86k7gskrlidm2kx2wfndgra0bdicpn0820y00a"; depends=[Biobase GGBase GGtools]; }; + ceu1kgv = derive2 { name="ceu1kgv"; version="0.28.0"; sha256="0r29k3lmzmk4qifzfnaa5slsan8dy4s52r55yldphx53n8q8qpl7"; depends=[Biobase GGBase]; }; + ceuhm3 = derive2 { name="ceuhm3"; version="0.24.0"; sha256="18zsz844qg3qy1if7z15658agbpiyd75h8jbc05mvj0fkqvgdrhb"; depends=[Biobase GGBase GGtools]; }; + cgdv17 = derive2 { name="cgdv17"; version="0.24.0"; sha256="1h3wqdwavxs565y2s4jf2fvirdpqvgghb5lv4szx58b1sbi1baba"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; + charmData = derive2 { name="charmData"; version="1.19.0"; sha256="1df933b5p187vblnv0q12n7l2fy69vdhr38hnj1019zw9vl62fnq"; depends=[pd_charm_hg18_example]; }; + chipenrich_data = derive2 { name="chipenrich.data"; version="2.10.0"; sha256="1vg1dqs7jzwnjm10vbd974bhpxq9533j2gqiyn78jj6pflpbamf5"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; }; + chipseqDBData = derive2 { name="chipseqDBData"; version="1.2.0"; sha256="100sj7fw82xs0n5s4hhfdf7g6p4k57yfhyp1xc2fmbfmf0n7z694"; depends=[AnnotationHub ExperimentHub S4Vectors]; }; + chromstaRData = derive2 { name="chromstaRData"; version="1.12.0"; sha256="02dsi4q143hxj04fvywkpx6kdafc3ccw74sqv5n2l5f7dc5v6nzy"; depends=[]; }; + cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.22.0"; sha256="1gv8hw7391nwzfd6cqh4b5ph69wzb9ghq9gq9g4knhrlrykf295x"; depends=[cnvGSA]; }; + colonCA = derive2 { name="colonCA"; version="1.28.0"; sha256="1d4b4wi5v102xw0kv3495zzhm32m6khg9krs6qw8513895law1gk"; depends=[Biobase]; }; + curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.2.0"; sha256="0nkxljkjxkqkqny0a39nds0gd59kr0qiqvrl9p5mzdpykappi1rl"; depends=[ExperimentHub SummarizedExperiment]; }; + curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.2.0"; sha256="16592i5w7fh1w5yjmmcwrk71j7yx3m33whjdm6yswfddq9rdy6jb"; depends=[SummarizedExperiment]; }; + curatedBladderData = derive2 { name="curatedBladderData"; version="1.22.0"; sha256="0pn3vsllrxpppzh5sv2nw3bqdhki3mn8iyssdklgghanlibmjdk0"; depends=[affy]; }; + curatedBreastData = derive2 { name="curatedBreastData"; version="2.14.0"; sha256="1mvf2cxvqa68vxiq3wxbq8xpk1yd5x1qyq9n1lrh34chnizmm5zi"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; + curatedCRCData = derive2 { name="curatedCRCData"; version="2.18.0"; sha256="068i4clz4v9frf3f8s42asahl814a73fidsdf53bwfizvmjgqdbs"; depends=[BiocGenerics nlme]; }; + curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.16.0"; sha256="0087z3dda9pjc4s2slw57x5fv9mllqyrpmpkagrs3v9pw6b7x7my"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; }; + curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.24.0"; sha256="1gn5p2hd3inafh45bjniskhya6nyja9birg7hgxmr5mi5g95fc4s"; depends=[affy BiocGenerics]; }; + curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.8.1"; sha256="0r579scg4f5hfd99wfpvgv62g0h57sc3w118lqgw8g3xhpbxnhcw"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; }; + davidTiling = derive2 { name="davidTiling"; version="1.26.0"; sha256="1qidyhjlkhn67llcmwx1wswyr0dm57ydzgwv9fz21mj8xmsc343l"; depends=[Biobase GO_db tilingArray]; }; + depmap = derive2 { name="depmap"; version="1.0.0"; sha256="1v6hhxfy0l1bw8nbkjjc9y6as5dbjlbq6znxjan5gpkll48a49p3"; depends=[AnnotationHub dplyr ExperimentHub]; }; + derfinderData = derive2 { name="derfinderData"; version="2.4.0"; sha256="18n9fmmq5n18c2blyjfxjrr9md175vkw9ldvldjjsjr4i1mdy2pr"; depends=[]; }; + diffloopdata = derive2 { name="diffloopdata"; version="1.14.0"; sha256="1sklif6b3arp1i2kcg6zfsf9rssn5cksk1p9hi3lygwv4h4x7jm1"; depends=[]; }; + diggitdata = derive2 { name="diggitdata"; version="1.18.0"; sha256="1yddn2zsfqixlp8pmmzm33ain877gvppwlr7imgasgyjc42g5r1q"; depends=[Biobase viper]; }; + dressCheck = derive2 { name="dressCheck"; version="0.24.0"; sha256="15wim7s96lkniyfiilhw7hwsjlaaz8vbi2cnnc42d44nxrfd9649"; depends=[Biobase]; }; + dsQTL = derive2 { name="dsQTL"; version="0.24.0"; sha256="1ygnsyzsqdpnvrxaa874xsj74rzk2117cfd1plajsnxcj3ak79hd"; depends=[Biobase GGBase SummarizedExperiment]; }; + dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.26.0"; sha256="0b2wjq2sw44j2qvyfhi7fc8ari9mj0v8a1cr0kr73b4k6khb47yr"; depends=[GEOquery marray]; }; + ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.26.0"; sha256="06mn8qfkdf9jr1hbadhv16dqv9q8w2q506p8qwy9jnjxx65vrwlg"; depends=[affy ecolicdf]; }; + estrogen = derive2 { name="estrogen"; version="1.32.0"; sha256="08h2f9pvzv7b7kv80yjfilcl77q7plb2bbg9yahadnaiaj4d58ix"; depends=[]; }; + etec16s = derive2 { name="etec16s"; version="1.14.0"; sha256="1m40gv1fi6bk2dj6ysp9dmbblfd06gx4f5gy44gfai696s1ll6xv"; depends=[Biobase metagenomeSeq]; }; + faahKO = derive2 { name="faahKO"; version="1.26.0"; sha256="05bsfr4svjgdsnz3h6x9dp2v4jpdjpxlhsk01izy739x2v5nqfqa"; depends=[xcms]; }; + fabiaData = derive2 { name="fabiaData"; version="1.24.0"; sha256="1g4zgf8v7yqgqakzxdwrlg9awxfz7s9yk0k6zs2mnn6b3r2yd8sf"; depends=[Biobase]; }; + facopy_annot = derive2 { name="facopy.annot"; version="1.6.0"; sha256="084zxksx2ar5h4827wb3w2k1490w1dzfxkzvshcs35z1fm18cjyj"; depends=[]; }; + facsDorit = derive2 { name="facsDorit"; version="1.28.0"; sha256="1xymidx155g97rhyrz9h8gikplkmm52188lzjyfxgvrx75b988h0"; depends=[prada]; }; + ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.24.0"; sha256="05ic4cjz4s4jckc61iciq1h4n4bkgdwvb79cnv2r1xdv3jyswsv4"; depends=[lumi]; }; + fibroEset = derive2 { name="fibroEset"; version="1.28.0"; sha256="0hyzrr05dpkvzhl3s3p2zq8vzlhs6d8rkh2vqrsz19r20vimb1ml"; depends=[Biobase]; }; + fission = derive2 { name="fission"; version="1.6.0"; sha256="0xhg88cypz2rp8m5njgp6ksgdc2hc6jykcikndkx3f88al6p67ap"; depends=[SummarizedExperiment]; }; + flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.22.0"; sha256="1isg55458bvcz6yy73b2iqyjiln34rh259862fiz004v1m2fk0dd"; depends=[flowCore]; }; + flowPloidyData = derive2 { name="flowPloidyData"; version="1.12.0"; sha256="02z5dzw5y5ngd4pi8am7yxxm8xad3za5hslqigvdv8sa51z4plm6"; depends=[]; }; + flowQBData = derive2 { name="flowQBData"; version="1.9.0"; sha256="0i9zgql9c8n45hwg28acvqknvxqfjs24irl2ijimklrdmgyd23gw"; depends=[]; }; + flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.22.0"; sha256="13r94xs6l55y9gdskwv2hf6jiz0qci6b5wzh1gp06v2l4rakabvc"; depends=[]; }; + frmaExampleData = derive2 { name="frmaExampleData"; version="1.22.0"; sha256="1ww894x9kbkgh13qysqhxd5awfqrz4pf99w5y4nfixp8w26j2rag"; depends=[]; }; + furrowSeg = derive2 { name="furrowSeg"; version="1.14.0"; sha256="1dvqfb8f4gqfi3jfqfc010z65qbi4nynyds08xa0bdh3kd9paqax"; depends=[abind dplyr EBImage locfit tiff]; }; + gageData = derive2 { name="gageData"; version="2.24.0"; sha256="0qslkcizal3p2d78lwpd46s6hzizhsmfyw3rplzx6r0cq3g05gsx"; depends=[]; }; + gaschYHS = derive2 { name="gaschYHS"; version="1.24.0"; sha256="10l1aqxbjyz7067k1hz09gxcgw0m9c5dxqmzx800s7w74w0jw5ni"; depends=[Biobase]; }; + gatingMLData = derive2 { name="gatingMLData"; version="2.26.0"; sha256="0gpp0ynz4q4pakvjp2gw3fxi7dfj7s96rf8sfzfyivgj37ygmc6q"; depends=[]; }; + gcspikelite = derive2 { name="gcspikelite"; version="1.24.0"; sha256="0k086fzmmrpzzlimy0xsy49l0r7f91a5dz5h3y0b83z4n5v2lb8m"; depends=[]; }; + geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.22.0"; sha256="0pygs8084kx3w4ngdijazfy4gj1fdcjda9jigfc4nmbivfa3bsny"; depends=[GenomicFeatures rtracklayer]; }; + genomationData = derive2 { name="genomationData"; version="1.18.0"; sha256="05ig82568q3zlyksg3izzdv0cpkyhz40jrdlkk4kh4mpfp6y90q2"; depends=[]; }; + geuvPack = derive2 { name="geuvPack"; version="1.18.0"; sha256="0nzj26bsji2pi81clcjbjm9wylsj9zjs2x7my2yjirzpgx5l5ia1"; depends=[SummarizedExperiment]; }; + geuvStore2 = derive2 { name="geuvStore2"; version="1.16.0"; sha256="0j40wasarcxm2x5k6vz892592c1d2wi5l1l61qk4yzyq0140hb0q"; depends=[BatchJobs GenomicRanges gQTLBase]; }; + golubEsets = derive2 { name="golubEsets"; version="1.28.0"; sha256="18w8d9m2li8qxd9bi26c1j7bjk7bzpdpi8znfyz5wqdq6h2yzrkx"; depends=[Biobase]; }; + grndata = derive2 { name="grndata"; version="1.18.0"; sha256="0zikyg5wn7q3bwd70gb4fwdw1ki2qvlkr5jn9rv0cjy2a5c2k97k"; depends=[]; }; + gskb = derive2 { name="gskb"; version="1.18.0"; sha256="02ghsd6jnqfji8rjzx1nz32mlvk1hw0s3ddhfbwirizyndjn4r4c"; depends=[]; }; + h5vcData = derive2 { name="h5vcData"; version="2.6.0"; sha256="0b9jf2qlb8a5xk59sbdjbblsh5psnyanci9r631sbddrc5pvszw2"; depends=[]; }; + hapmap100khind = derive2 { name="hapmap100khind"; version="1.28.0"; sha256="0qjzbp91vip9f1rf5hw8mq22w8fxy8a8gkyw58h03zbl5bqnzpvv"; depends=[]; }; + hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.28.0"; sha256="1gr5qkxfxkcmgdllx6k8znacjpcqx1bjqgpm4phvawarqk3hnbvz"; depends=[]; }; + hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.28.0"; sha256="1083m1zw88br0s8hglxv9lvzvpydyl6silgddh8z9y9h0xc02gv6"; depends=[]; }; + hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.28.0"; sha256="14xwg4gavrjb8b9iyw2dhdsj2xhywnq9d10yd3c1sliv1v5fdhma"; depends=[]; }; + hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.28.0"; sha256="0zhnmksx5anaa7wmxh8f06fixddrkj59b3m05db5swzbcijfa9zw"; depends=[]; }; + hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.28.0"; sha256="1ybx99zjy5g6xmwbnyvzms1wk0fm8jjz5f57mpw6m5x2pqj9w5am"; depends=[]; }; + harbChIP = derive2 { name="harbChIP"; version="1.24.0"; sha256="0rm4ai4mnxnmim7gxf0cmxpvrxx0v33wv6k0m3f47fb6barwdx8z"; depends=[Biobase Biostrings IRanges]; }; + healthyFlowData = derive2 { name="healthyFlowData"; version="1.24.0"; sha256="14iix2jzha8yr02qr4lb5x4c0k68jy5w0rps1vnaqx54v4lxvsff"; depends=[flowCore]; }; + hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.24.0"; sha256="0k7f57jvyl3l9n7jwm5mcdsvwn55l0mhjbcjd64hsq67f71942xf"; depends=[]; }; + hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.6.0"; sha256="19m1lyl7c5wfzlrws4cnaya984c69sy720wa96wb2v5syzmazvwb"; depends=[Biobase]; }; + hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.24.0"; sha256="0qnc220b42ls7193nilbhk0hm1awii8r735l9314d8kr5i0lb5vf"; depends=[]; }; + hgu2beta7 = derive2 { name="hgu2beta7"; version="1.26.0"; sha256="08ix30hrjqzdrjcaxr3x5svcsanxmxrqj4j8cwsbnkhjvb39lc29"; depends=[]; }; + hmyriB36 = derive2 { name="hmyriB36"; version="1.22.0"; sha256="174k3fk9gkrk592f3i1qwl4cdrjikdnywh7mla2yyj4qm187wslf"; depends=[Biobase GGBase]; }; + humanStemCell = derive2 { name="humanStemCell"; version="0.26.0"; sha256="1vg9la7av65rknvbvrhbfb0cjhvsfj7bsf0dxzmp3v5gg0mnmyrh"; depends=[Biobase hgu133plus2_db]; }; + kidpack = derive2 { name="kidpack"; version="1.28.0"; sha256="1v54hd2v25p8l5ly3p8wb7gaj6nw03as7kq9i07jivbmnlbvrvh3"; depends=[Biobase]; }; + leeBamViews = derive2 { name="leeBamViews"; version="1.22.0"; sha256="0fcabcsc1crjsd8m6h2lzzrfrl7pjzksp59v991jaimfs5cp8sgw"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; + leukemiasEset = derive2 { name="leukemiasEset"; version="1.22.0"; sha256="0hk48p3nw1fasxww5pac9jm3xr3xx1lk7cj9gyvaf63r9qag28d8"; depends=[Biobase]; }; + lumiBarnes = derive2 { name="lumiBarnes"; version="1.26.0"; sha256="0b6i4az6a3nj9c0x68nfprazdkm2qlcw09mggwi888zqqx4iga9c"; depends=[Biobase lumi]; }; + lungExpression = derive2 { name="lungExpression"; version="0.24.0"; sha256="0py7jingivvk9pshvl607lzyvyln3ff4b91j85jb67n4a6bivln4"; depends=[Biobase]; }; + lydata = derive2 { name="lydata"; version="1.12.0"; sha256="1z0nw736lz1f2papciajqdqbblgsrv26lkk6ww2vq7h9gxxjsyhp"; depends=[]; }; + mAPKLData = derive2 { name="mAPKLData"; version="1.18.0"; sha256="04dapbb66qbzy5xdz8c43hbq2phvvw86mghkc2pmqphiyjc9z3ky"; depends=[]; }; + mCSEAdata = derive2 { name="mCSEAdata"; version="1.6.0"; sha256="0a4zjil92fql45np0n6b90j55p2yrz7j2pkb65vgm9s3fqpk8pz1"; depends=[]; }; + macrophage = derive2 { name="macrophage"; version="1.2.0"; sha256="0axlys1i2hpzx7w5q1nf18vwipgqnqcbzrwysjffkj6mb9cs57zr"; depends=[]; }; + mammaPrintData = derive2 { name="mammaPrintData"; version="1.22.0"; sha256="11fjkclzmxjbx91pwpbaah2l2frdn3v5a44d592jbw2pahyd81sg"; depends=[]; }; + maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.30.0"; sha256="0lrgr2qzg2mm07xffpqkl4ppkmcwaiay0kjr5jgsl0df1pb3z5pp"; depends=[]; }; + mcsurvdata = derive2 { name="mcsurvdata"; version="1.4.0"; sha256="10b8g3c50hw4jp3rbsmz8smvyf6k3d1hff6w77xhy3ly92s9jgg6"; depends=[AnnotationHub Biobase ExperimentHub]; }; + metaMSdata = derive2 { name="metaMSdata"; version="1.22.0"; sha256="1vsn42xj3xxz854i1yhd77lm16v8z4g9r0f7d9wyvq5pwcak44hd"; depends=[]; }; + methyvimData = derive2 { name="methyvimData"; version="1.8.0"; sha256="08w7vzb28s5x5zlwrlj9l0k8iq45zpf1g6mgzwr6p6b43xva5dg9"; depends=[minfi]; }; + miRNATarget = derive2 { name="miRNATarget"; version="1.24.0"; sha256="1ch761d9sfi890sljardrmjm1h0p6x4ii0lj89jg78jdhprl8xgq"; depends=[Biobase]; }; + miRcompData = derive2 { name="miRcompData"; version="1.16.0"; sha256="1izvvglzbqf291wdd9qg3qh834snhcyzdz7mcqvgi1qgw1ri96fm"; depends=[]; }; + microRNAome = derive2 { name="microRNAome"; version="1.8.0"; sha256="0m2iwpx7qblibqlm207ml41imjixc2jgsiq6zqgsa7zrl56wbnfp"; depends=[SummarizedExperiment]; }; + minfiData = derive2 { name="minfiData"; version="0.32.0"; sha256="01fdw5pi8qg03mbc1skvrlmddazmcihyrv7jw70kvq1pv01zxd6n"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; + minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.12.0"; sha256="1kkymjrj34w7sdq057ngsfjbi3h1f2vcncszarybzh0qabh17agg"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; }; + minionSummaryData = derive2 { name="minionSummaryData"; version="1.16.0"; sha256="0bdrrzcrvd7h9cb231hi29b9hrvv5cnmd8h5161sij2mdh3rwbwl"; depends=[]; }; + mitoODEdata = derive2 { name="mitoODEdata"; version="1.22.0"; sha256="0wn118bchr3z679nqk3fa1wrlkqvlh213nh88z1caga7k0vqjsin"; depends=[]; }; + mosaicsExample = derive2 { name="mosaicsExample"; version="1.24.0"; sha256="136kh8r8yh7rfkjszjgxz682r3jhw64ic46jykbdnhhypg8jvj2x"; depends=[]; }; + mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.24.0"; sha256="0g7zsy0j34gbad4ijkj90x1z2w6azvkdgm1q9wqbdypl5gbj0zl4"; depends=[]; }; + msPurityData = derive2 { name="msPurityData"; version="1.14.0"; sha256="19mp4fxjbcw76rwyb1bvkc79qlqda1i1sd41s82m04k5wfwsrvz5"; depends=[]; }; + msd16s = derive2 { name="msd16s"; version="1.6.0"; sha256="1dhnscmc477919ylvzb1qp6bvkrk6yrqi3cwvxhwn650jx5cgyhg"; depends=[Biobase metagenomeSeq]; }; + msdata = derive2 { name="msdata"; version="0.26.0"; sha256="0bb53k29jzx0jwzbnrhjilj8prfrrvniy81x47i4qjpva8aqi71x"; depends=[]; }; + msqc1 = derive2 { name="msqc1"; version="1.14.0"; sha256="0sa27px1nnwnbpmab64xiivvy48dicg3xnkz6adyg0k2wbgb0qza"; depends=[lattice]; }; + mtbls2 = derive2 { name="mtbls2"; version="1.16.0"; sha256="1z0b8dh1acpwnqc8hrnlpzb99qd88pcymnz28nkdar8ww0zjddxv"; depends=[]; }; + muscData = derive2 { name="muscData"; version="1.0.0"; sha256="0x1gsj2hp3cqs6r3x3b4gw3jrw8w5s9wyhfc85sacnzq7r9hbp2x"; depends=[ExperimentHub SingleCellExperiment]; }; + mvoutData = derive2 { name="mvoutData"; version="1.22.0"; sha256="0abd9jv57k52lvckxxhg32hdd9999v24nsnc7il9ynl86prisa1m"; depends=[affy Biobase lumi]; }; + nanotubes = derive2 { name="nanotubes"; version="1.2.0"; sha256="1mxg25wfqh2v5n5vg2z5m26xai6blyh9kh9hlzra5pz02kfazkyx"; depends=[]; }; + oct4 = derive2 { name="oct4"; version="1.2.0"; sha256="02w5ccvx9p4bb3pq7w1y85gn58afl30nw1sakhg302rimmx1109n"; depends=[]; }; + pRolocdata = derive2 { name="pRolocdata"; version="1.24.0"; sha256="1gyd6jmha72qpw4lzmnb51z0c992bj2fxjai3pk12lnhpyyk1qqy"; depends=[Biobase MSnbase]; }; + parathyroidSE = derive2 { name="parathyroidSE"; version="1.24.0"; sha256="06vyxzjdfxn6964sv13c4mhxqgrxm5idjcx3c40v0bwys93cgkxm"; depends=[SummarizedExperiment]; }; + pasilla = derive2 { name="pasilla"; version="1.14.0"; sha256="0h124i2fb2lbj2k48zzf1n7ldqa471bs26fbd9vw50299aqx28x0"; depends=[]; }; + pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.24.0"; sha256="05simp2qbnpisxwdwl59ydjjyphmhy51w4jaq3iapwmwz5qzkbss"; depends=[]; }; + pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.16.0"; sha256="1iargpnk8calgy24nihgxz04w5w4wx9sr5yrl6kzjzwqvxskkkrq"; depends=[]; }; + pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.22.0"; sha256="00dkclj6vcwjr3zc0fsfga4lpr4b96v2ilasl9mx6f7z3hmn379x"; depends=[]; }; + pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.22.0"; sha256="03128h4aq839c9ywaxjpb64pjigz5qcmm0v1cnf6zqyj572qk7a6"; depends=[]; }; + pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.22.0"; sha256="106jrp8b17d2zdvi6384v16pni1hw3ngn7l8l0vzm1wignr3g41i"; depends=[]; }; + pcxnData = derive2 { name="pcxnData"; version="2.8.0"; sha256="08rpca2v3505r8b8lb2yqrz7736cdkx99ahk161h2fjkyzrl4v27"; depends=[]; }; + pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.24.0"; sha256="0njvki7j1vqnckvqj8xn9lnkw9vnc2z1zr02x3rzvl21slkq2nan"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + pepDat = derive2 { name="pepDat"; version="1.6.0"; sha256="1zcim2l4qvp6ym8325586r6hv4f69dnqykyv5n2kjpa7rwjwmphr"; depends=[GenomicRanges]; }; + plasFIA = derive2 { name="plasFIA"; version="1.14.0"; sha256="02yga7szrxhz9sbwpd3g0khm3mrpgfd8hzfj0mdrzlcx455kyjgd"; depends=[proFIA]; }; + ppiData = derive2 { name="ppiData"; version="0.24.0"; sha256="0d3j7w8af4q6hf8ggrzh0jgk7ddd6jkp80n9w2mvw8b648b42m5r"; depends=[AnnotationDbi graph]; }; + prebsdata = derive2 { name="prebsdata"; version="1.22.0"; sha256="0sgl74pxpc4mxqyjvj4ghgk9y1vgy5rj75253xpjmhfz4pyimflk"; depends=[]; }; + prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.14.0"; sha256="1a7rhm6n016zvs0kmy2sr419liq26fjgailmyiwbjc0x556vdww9"; depends=[Biobase]; }; + prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.14.0"; sha256="1grdrjdznnzq3dfgblfa1d79l2wayhsv9hkzk7cw2pzpyb39ramr"; depends=[Biobase]; }; + prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.14.0"; sha256="07k2vwrmnhs9c44d6lsslmcajmid55ldsbcwqw1l8073jczmhfab"; depends=[Biobase]; }; + prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.14.0"; sha256="15kfwdyzwyr2bbi7g98q6khkbkk0bisp602if1dnipbmak9f0jdp"; depends=[Biobase]; }; + prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.14.0"; sha256="14pz58b1g8kq3sx2fc61zlhy1r25hdzcr8xv179pfjnqslfgqbrp"; depends=[Biobase]; }; + pumadata = derive2 { name="pumadata"; version="2.22.0"; sha256="1pw6j2r23x4r0623c8fdhflgfxy66qf0r8khdgljh86xiyc03scs"; depends=[Biobase oligo puma]; }; + pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.0.0"; sha256="08k1p5pn0rhvh4zb9cylqxwk3z3s5cbgn5fi06x8nsgh0xhijn6s"; depends=[ExperimentHub]; }; + qPLEXdata = derive2 { name="qPLEXdata"; version="1.4.0"; sha256="069fpjlkynd6rvqcb4hfg2rh092jz8jl2sdsfr066mbywkv4dj1r"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; }; + rRDPData = derive2 { name="rRDPData"; version="1.6.0"; sha256="12ba30ni912anz10n8hqd7cj6bgn0fpzlgzzyvdrl483dhvswla0"; depends=[rRDP]; }; + rcellminerData = derive2 { name="rcellminerData"; version="2.8.0"; sha256="0w1rvdkbwvva5zhciw68207cci2krkwx0vavrsgcm1dhbl4983f7"; depends=[Biobase]; }; + restfulSEData = derive2 { name="restfulSEData"; version="1.8.0"; sha256="1657mp19f5pgdzyl9iiq4cg6n03zz616qkx01xp6q5yfidhc9wml"; depends=[ExperimentHub SummarizedExperiment]; }; + rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.24.0"; sha256="1nbnvz89b7620qdb5dmrxr1pwjdpbg53m3bb2lqykqrfg8rlgsnx"; depends=[]; }; + sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.10.0"; sha256="1dpnqh9i0wjwzmhvb990nckasdzj1in1ma5v1rcvkfi8vspwf19f"; depends=[SummarizedExperiment]; }; + scRNAseq = derive2 { name="scRNAseq"; version="2.0.2"; sha256="1fpfpim7fiy2b0n3y5k11z0s6kaqf5x3wk6lw4crhp23pfgx34h7"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; }; + seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.18.0"; sha256="1qywb8433q0bm1f7c3hfxxnnj721ijjmapanlid87hrh0aqvg68h"; depends=[]; }; + seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.22.0"; sha256="0l180zki5mm2ajapbq7nlivg3287b0i9srgk5r331glh65ly8x6d"; depends=[]; }; + seqc = derive2 { name="seqc"; version="1.20.0"; sha256="1w0ymj9f993mb6380yr40gl56xqhbbcnm5f2ijsjg40bmih4hhv2"; depends=[Biobase]; }; + serumStimulation = derive2 { name="serumStimulation"; version="1.22.0"; sha256="1g0sx594hsivk98a2x9pgrxhffl8nwwbp0k58fbn5vl4fba2f4jv"; depends=[]; }; + sesameData = derive2 { name="sesameData"; version="1.4.0"; sha256="0v9rd407ayvbr8g5b63kh3kc1m90mw25qm8i8k7bpyq4f3lp8aqi"; depends=[AnnotationHub curl ExperimentHub]; }; + seventyGeneData = derive2 { name="seventyGeneData"; version="1.22.0"; sha256="0kp1zp8ncc7w60a961p8r8b27rnmwdzipdjj38bpg110c0p79sz3"; depends=[]; }; + shinyMethylData = derive2 { name="shinyMethylData"; version="1.6.0"; sha256="1lilbg2lh6adyik24d9hv2hazfs9rp1zranb4pjz8mp144qbpc9p"; depends=[]; }; + signatureSearchData = derive2 { name="signatureSearchData"; version="1.0.0"; sha256="1gz3054j796czr98wd38c9xj6lzjpfdpp75kcs9ckfdspaaa5g4m"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5 signatureSearch]; }; + simpIntLists = derive2 { name="simpIntLists"; version="1.22.0"; sha256="0lilbk76djq5kfsiwjbzdy1lsws635yp38rijgdr2z9zgj8fh6jr"; depends=[]; }; + stemHypoxia = derive2 { name="stemHypoxia"; version="1.22.0"; sha256="13b533qwr05zs5qqyq6ciaxki5dkl5i1kbvzyhpg1fzyyh3k5bwb"; depends=[]; }; + stjudem = derive2 { name="stjudem"; version="1.26.0"; sha256="0amds4vmd3lzlhbsw9rfd7awx66gwb85g7v0jis40x2dxz8669hr"; depends=[]; }; + synapterdata = derive2 { name="synapterdata"; version="1.24.0"; sha256="1xm3pi0ya8alb7qj57kg0naf981q3hfqp892waql209kf866zchb"; depends=[synapter]; }; + systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.14.2"; sha256="0xrq82hinzxy325r2flrif8c0wn5m0kx7mv0jc95gzy0lvp52y9q"; depends=[BiocGenerics]; }; + tartare = derive2 { name="tartare"; version="1.0.0"; sha256="0cvmy89gbsspp5pl0jp3w8q6raza4w1pmm2cmcp9c5hfbiiszj8b"; depends=[AnnotationHub ExperimentHub]; }; + tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="1.4.0"; sha256="1nsig05z8y7ya81i4siiny6058873n227c5isbjw0fkbgkkpbi8d"; depends=[bsseq ExperimentHub knitr]; }; + tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.24.0"; sha256="0sbs1zl6xgnlkcnw955sgzyfcgc76idvys34fwlps6rbpxischmf"; depends=[]; }; + tinesath1probe = derive2 { name="tinesath1probe"; version="1.24.0"; sha256="1sk219jh25lr5nqgv8qgj75xdljgij1j8m2cykr74sssawg375z1"; depends=[AnnotationDbi]; }; + tissueTreg = derive2 { name="tissueTreg"; version="1.6.0"; sha256="1zpn5w5kawr320s578sa1sm5a7rqp180mpa1rcb74zym0qz9qksj"; depends=[]; }; + tofsimsData = derive2 { name="tofsimsData"; version="1.14.0"; sha256="1ydasd2xw3c2gryvhlj9818i0y49n6njk6m65zn9an3csrhv5dc6"; depends=[]; }; + topdownrdata = derive2 { name="topdownrdata"; version="1.8.0"; sha256="1kwcs06w38s41pp4yl4wqv09ag22vamv13v508261razjg8rbya0"; depends=[topdownr]; }; + tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.24.0"; sha256="1ik0bxdiliwmpgrwi2075il0spwzql61fhx18axg3k1dy3zjhd6d"; depends=[Biobase]; }; + tximportData = derive2 { name="tximportData"; version="1.14.0"; sha256="1496m83dv4adzw0r62fbj9ydsrni82c7lacfpmzg7jasbma3asvy"; depends=[]; }; + vulcandata = derive2 { name="vulcandata"; version="1.8.0"; sha256="18il2kqzfr472jndyraxx5kcy63chgc96cs2bdb2wjlgkkr1fg9v"; depends=[]; }; + waveTilingData = derive2 { name="waveTilingData"; version="1.22.0"; sha256="1vxbswac7zhlb1yg3n7k89rdbxry4ps8hxn4xr4idl7ydiap6igk"; depends=[]; }; + yeastCC = derive2 { name="yeastCC"; version="1.26.0"; sha256="1nbvkg74qh96akq4h950xx4va2bfmm13ri3p4fzhvw8imh5gg59f"; depends=[Biobase]; }; + yeastExpData = derive2 { name="yeastExpData"; version="0.32.0"; sha256="13g7kffkwazasjgfyw5np3aq9j2hlcxskxpl0lchclpczfrnn9g6"; depends=[graph]; }; + yeastGSData = derive2 { name="yeastGSData"; version="0.24.0"; sha256="0npmsfvxlrfiz27lwnij7y41kj8zc1v3vv8cc4nk58xkwypczjza"; depends=[]; }; + yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.22.0"; sha256="08byj2pw9sfdkq3bcnzhhxv8ik87wa852as11fsph49h886dgd4h"; depends=[]; }; + yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.24.0"; sha256="0rnlx2qsz5dsx9midfk81avlvjn0bjmybj6278ia8s0l83lbqdgh"; depends=[]; }; + yri1kgv = derive2 { name="yri1kgv"; version="0.28.0"; sha256="1wg086rld5ranrb9wd55pwri95qa323wzp2x4vm3bqa7q4xbbk4v"; depends=[Biobase GGBase]; }; + yriMulti = derive2 { name="yriMulti"; version="0.16.0"; sha256="1j1xll3w2v68xp2gfh0xmdr35w71i4g1g4q3v0a73qn8zw4b17r8"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; }; + zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.6.0"; sha256="1dk0ijlc6cg0jwn20z125i2zfiayx3bvgwjq974cfxcbv9l0pl7b"; depends=[]; }; } diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index a85290708fc57..f923130c64403 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -4,1642 +4,1814 @@ # Rscript generate-r-packages.R bioc >new && mv new bioc-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.8"; }; +let derive2 = derive { biocVersion = "3.10"; }; in with self; { - ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.12.0"; sha256="0bvanqmg1smyckh16m2qn7d68zq4j7n74sgsnbgms5jngbp9158v"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; }; - ABSSeq = derive2 { name="ABSSeq"; version="1.36.0"; sha256="0nfz9l6zfnxm7lgq39nyzlhgh55kdnq8rgvjx33rn1ybcn63frsw"; depends=[limma locfit]; }; - ABarray = derive2 { name="ABarray"; version="1.50.0"; sha256="06gy96ppfrix6w9vjfljsj1j0hs7k67j0awzx8hkw301z281akxs"; depends=[Biobase multtest]; }; - ACE = derive2 { name="ACE"; version="1.0.0"; sha256="0ry6yfpzi6g0qnimnpzf3iibhm2bsblhi3604hiy76hl6mz20qg8"; depends=[Biobase ggplot2 QDNAseq]; }; - ACME = derive2 { name="ACME"; version="2.38.0"; sha256="17vr6ifjnmpcclifnzpbz538bmvs4xfym6rq9ndkh9xbjfacfcdm"; depends=[Biobase BiocGenerics]; }; - ADaCGH2 = derive2 { name="ADaCGH2"; version="2.22.0"; sha256="121vjv6xbinkkl6zq7gg3pgqwk1068rh2fpd16w5c7pcslkr7n1q"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; - AGDEX = derive2 { name="AGDEX"; version="1.30.0"; sha256="0l16sfmm3j9lhyjbl0bcghhkmr77a2rrscfd3ry93z7q0gki0fw8"; depends=[Biobase GSEABase]; }; - AIMS = derive2 { name="AIMS"; version="1.14.1"; sha256="1np7r3982i3l5pwakmjmg7c326f47bsr9sbp5c5b6mhz500s5mrb"; depends=[Biobase e1071]; }; - ALDEx2 = derive2 { name="ALDEx2"; version="1.14.1"; sha256="190kcvfqhh1rg67kggdvp4pd6i3dicnqclrri0y06zrnl1c8cnlw"; depends=[BiocParallel GenomicRanges IRanges multtest S4Vectors SummarizedExperiment]; }; - AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.8.0"; sha256="0w8h7a8skvwd8ass98y8sx733hz23kczpxsbwi7cdmpx8b0wxqaq"; depends=[]; }; - ANF = derive2 { name="ANF"; version="1.4.0"; sha256="08kd394kz7x0hjb8js9xpz8f1b7rg4yzghgys0il0w1z335ivb8c"; depends=[Biobase igraph MASS RColorBrewer survival]; }; - ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.22.0"; sha256="09wfd4vqfvmkpqn9dwqly1dz4h1ckh621jbwj1dab6q4z0dfmzmd"; depends=[ARRmData]; }; - ASAFE = derive2 { name="ASAFE"; version="1.8.0"; sha256="0fjiz98cr83cjfakqq7q3prqha5gzr2k6741327jgjibmhbzpyz3"; depends=[]; }; - ASEB = derive2 { name="ASEB"; version="1.26.0"; sha256="0hyi0yncxwqydwcdmw265k6zip5ahry5yx4na3fiz1n6ivi7dxq2"; depends=[]; }; - ASGSCA = derive2 { name="ASGSCA"; version="1.16.0"; sha256="0sbyvwmjsfsrlc4gymzjb3aqs1k600w2zwnz7ih1gspgj4h6yi6l"; depends=[MASS Matrix]; }; - ASICS = derive2 { name="ASICS"; version="1.2.0"; sha256="12dq0ydn35zyjfspaxpn6k8wk8443a666v5ql4d4x5nf5vy39sk7"; depends=[BiocParallel ggplot2 gridExtra plyr quadprog ropls speaq SummarizedExperiment zoo]; }; - ASSET = derive2 { name="ASSET"; version="2.0.0"; sha256="05d788w7l6sd63xzay8yv0zxjbibm6dfm9rm8shihzn74c9wk7i9"; depends=[MASS msm rmeta]; }; - ASSIGN = derive2 { name="ASSIGN"; version="1.18.0"; sha256="1mcjz9nksk0a5jgd4wyjpf7af6c883idllkx4z14w651840sd6lr"; depends=[ggplot2 gplots msm Rlab sva yaml]; }; - ASpli = derive2 { name="ASpli"; version="1.8.1"; sha256="1lzfmnhpy94q9rj4qsgd7hy031y62jgfs4650ijs3agzb674z1ji"; depends=[AnnotationDbi BiocGenerics BiocStyle edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rsamtools S4Vectors]; }; - ATACseqQC = derive2 { name="ATACseqQC"; version="1.6.4"; sha256="1rblvqar11fib6ip2hq0756vqi6qmncf90jw6i5p5lrgzmaxy8hn"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; }; - AUCell = derive2 { name="AUCell"; version="1.4.1"; sha256="1kdrs0521cyb8wlc4i3idfprrcy2f9w6kl56hfa94n0brmx62ya9"; depends=[data_table GSEABase mixtools R_utils shiny SummarizedExperiment]; }; - AffiXcan = derive2 { name="AffiXcan"; version="1.0.0"; sha256="1y07gf8f94s2i080a3bh0gam2fx2n4hmbznddkcxv7rkqgcq0adx"; depends=[BiocParallel MultiAssayExperiment SummarizedExperiment]; }; - AffyCompatible = derive2 { name="AffyCompatible"; version="1.42.0"; sha256="1vkjlpxpckmpgpf2svz866sa2pjpkhp4nc06vzpjfa8sqj5dl6n4"; depends=[Biostrings RCurl XML]; }; - AffyExpress = derive2 { name="AffyExpress"; version="1.48.0"; sha256="0zkk74dnbihc3xna4hlypyyqg3arhdsjqbc7q3dji8j9kz76kmcw"; depends=[affy limma]; }; - AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.28.0"; sha256="04lvkd8m1arzilgs0i9f8f52f3yc7himhv4igbxhvhqmz4fln3xi"; depends=[affy]; }; - AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.32.0"; sha256="0iqns14hihxr2rf4g3x47k9sniy6qsfmqq1r4jd8alcis22pl4gx"; depends=[affy affycoretools Biobase limma preprocessCore]; }; - AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.20.0"; sha256="03524lj6aw9cskbpxzjmi9g708x6p94mf26yz4j941g1d0mc3z91"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; - AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.16.0"; sha256="088f4h87bvlckf4s4q8iy9n9d9hw9njj6y4wwr3f62xax264glj0"; depends=[Biobase graph log4r rjson]; }; - Anaquin = derive2 { name="Anaquin"; version="2.6.1"; sha256="1p01bgfx5i82x6541q3479fgwln5ri8pyqrm2hbg0hlgl25w3v4d"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; }; - AneuFinder = derive2 { name="AneuFinder"; version="1.10.2"; sha256="0j25syzlnyq8c8pxc5yfm6k4dzvprpna08gg6117v4k3sdmgcz4p"; depends=[AneuFinderData bamsignals Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; - AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.44.0"; sha256="1954vimkx5yb9irppq8vssq0f3yjkg36w38b9r0rqmijx1ps7x5d"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; - AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.6.0"; sha256="0wrr10cxjzmxx46vjzq2nsf6xlqz1sqwx4xm0sk3d77ff8wmph4x"; depends=[GenomicRanges lazyeval]; }; - AnnotationForge = derive2 { name="AnnotationForge"; version="1.24.0"; sha256="13yvhf3yskmvhs8szs6rkw93h81h5xqa3h19h91pp6nprhc8s3ll"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; - AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.32.0"; sha256="1x11mfabh7kbp39y5rkmrpjkaawx7ab5anfmciamrmrcw1kddbss"; depends=[AnnotationDbi DBI]; }; - AnnotationHub = derive2 { name="AnnotationHub"; version="2.14.5"; sha256="0iyrxaijl4614iz5c1j53227xy2g756p3bx7hcwglcybh0k30nki"; depends=[AnnotationDbi BiocGenerics BiocManager curl httr interactiveDisplayBase RSQLite S4Vectors yaml]; }; - AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.12.0"; sha256="1xim76sxldx70h13fpkhz7fxr5rcq0gp7558w4v1iqjjzd4gp3mh"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; - ArrayExpress = derive2 { name="ArrayExpress"; version="1.42.0"; sha256="1a61miwsyqghmqnfnfpd7b0p712mz9cpcrq00p9b7jr8j4jd5vla"; depends=[Biobase limma oligo XML]; }; - ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.32.1"; sha256="0gv3f1ynyl52ab7zvmfi9s34ns6nwqyayh5imv6b31l92rw5ifdm"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; - ArrayTV = derive2 { name="ArrayTV"; version="1.20.0"; sha256="00azibnfaa7w9gzlx8l21l9xlkzagwb0zbd70f95wvbr5qiq9w93"; depends=[DNAcopy foreach IRanges oligoClasses S4Vectors]; }; - ArrayTools = derive2 { name="ArrayTools"; version="1.42.0"; sha256="08wklnb3wi0yzxis5nic5g7w8shn9n3j6h7vbvxjv8n92bqmc0y1"; depends=[affy Biobase limma xtable]; }; - AssessORF = derive2 { name="AssessORF"; version="1.0.2"; sha256="1kkdds8mmrnh72j267xhyfn40i5czdfwhy8zlxxlm376mxipxwgj"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; }; - BAC = derive2 { name="BAC"; version="1.42.0"; sha256="02r74rwsn59b1f9l3n51xh6jj5bwjcg9qp63i1jczfnglwga01av"; depends=[]; }; - BADER = derive2 { name="BADER"; version="1.20.1"; sha256="114xy8yynfncnrlsi1v44gsiq2a8jyh9q7ssb3f3rhb7rw8v0k4l"; depends=[]; }; - BAGS = derive2 { name="BAGS"; version="2.22.0"; sha256="13zlmffg8y1vrkpj62wawfzx9h68q1p42bizrwzq0cdh6jyafp3z"; depends=[Biobase breastCancerVDX]; }; - BASiCS = derive2 { name="BASiCS"; version="1.4.7"; sha256="1i0ynbc6grg28w8wsibrcfyncdipacb1lprnw11fvgkd0d429mg2"; depends=[BiocGenerics coda data_table ggplot2 KernSmooth MASS matrixStats Rcpp RcppArmadillo S4Vectors scran SingleCellExperiment SummarizedExperiment testthat]; }; - BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.12.0"; sha256="0k49ad1k3szjawsn7s97k7y2j7c03cqjcg8kmx8wmypjivjv1nv0"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; - BCRANK = derive2 { name="BCRANK"; version="1.44.0"; sha256="0zrmrc4dsz9jl0n7a0fsnmfws54hpda21sxpdqdq86qhj4ljz2nd"; depends=[Biostrings]; }; - BDMMAcorrect = derive2 { name="BDMMAcorrect"; version="1.0.1"; sha256="1i4d9qk4iw8m1p590fg85qg6w55982mn41zp8bqinygx5vzvq8i2"; depends=[ape ellipse ggplot2 Rcpp RcppArmadillo RcppEigen SummarizedExperiment vegan]; }; - BEARscc = derive2 { name="BEARscc"; version="1.2.1"; sha256="0zhf8l789yhp4fx75s3955r0m809r9lilrd57y5qkcpya9vq8fxb"; depends=[data_table ggplot2 SingleCellExperiment]; }; - BEAT = derive2 { name="BEAT"; version="1.20.1"; sha256="1xrfgfw91fdyx2dpkbc6xvwg266ym623mbmqzlg879lh0pny0400"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; - BEclear = derive2 { name="BEclear"; version="1.14.0"; sha256="0xwmq59hbkxki573brhp2rvmn06dyysk64n4fs0vna0h729d8lhj"; depends=[BiocParallel data_table futile_logger Matrix Rdpack]; }; - BGmix = derive2 { name="BGmix"; version="1.42.0"; sha256="19n8cqdfrp8br20g7gw787w2sa3sgs41vfnic6l9gdbqphb702d1"; depends=[KernSmooth]; }; - BHC = derive2 { name="BHC"; version="1.34.0"; sha256="0wsz5ak60fd69mds7f3siv4g3hygbzwdapm6jkldnph2x3sv0f2w"; depends=[]; }; - BLMA = derive2 { name="BLMA"; version="1.6.0"; sha256="12fxafyyffgmbnqqpq15wfawa5s1lmygkjxbh08sl34a9d5g2apf"; depends=[Biobase graph GSA limma PADOG ROntoTools]; }; - BPRMeth = derive2 { name="BPRMeth"; version="1.8.1"; sha256="10dsww7bhad59i3667iy2kq40bxd34ikbl8bhbczgwm2pfp0pq9f"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; }; - BRAIN = derive2 { name="BRAIN"; version="1.28.1"; sha256="0nz3ci9jyckbwpvarjmc5k19qspv5xpkks83ys3zz24j1v828z2d"; depends=[Biostrings lattice PolynomF]; }; - BSgenome = derive2 { name="BSgenome"; version="1.50.0"; sha256="07z4zxx0khrc86qqvc7vxww8df9fh6pyks9ajxkc9gdqr5nn79j7"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; }; - BUMHMM = derive2 { name="BUMHMM"; version="1.6.2"; sha256="0vna27h3g86dba5l94s74vjzswds95vsxaiw51da283436g2c2pn"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; }; - BUS = derive2 { name="BUS"; version="1.38.0"; sha256="04lk2rq8cv6hw64ssl1v64gqg7fz2jm7hd4hwkf6q6nhivr7skpi"; depends=[infotheo minet]; }; - BUScorrect = derive2 { name="BUScorrect"; version="1.0.0"; sha256="1z841bjyyqah232dhdpm7j77irjim09h3lpy2659n5llgzr7cdi2"; depends=[gplots SummarizedExperiment]; }; - BaalChIP = derive2 { name="BaalChIP"; version="1.8.0"; sha256="0xscwx5afwcyrg8pcq3fd80m9h8mqiswyvnk3x13r020r1jgxr9l"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; - BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.10.0"; sha256="1d29hnaxyvlpdbzadnjp3x1jba1d4vis797iak81b217wrq34g1z"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; - BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.26.0"; sha256="1w7iz4nhgpx25004s9bd6mw9pm1z8dr8p7nxr6ck8wbdv19j1srp"; depends=[RCurl RJSONIO]; }; - Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.18.1"; sha256="1vn9lwyjmhs09cpagiycvcyync54xfyv7id8y597p4i8p2nk6c26"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; - BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.10.0"; sha256="03micn3sy861i7218vcx7fpzflvlh5rsgx0gnc4irzvi1xh478j9"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; - BatchQC = derive2 { name="BatchQC"; version="1.10.1"; sha256="1clsabpfnaiy0dlb0m88z72kmwslny9rinrgzcb9ljjma3yarx8q"; depends=[corpcor d3heatmap ggvis gplots knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; - BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.8.0"; sha256="0ziaciznv926xq6xjj22afcwpvz6ha0g93fgyw0y6cr4kx8mlphd"; depends=[Biobase]; }; - BayesPeak = derive2 { name="BayesPeak"; version="1.34.0"; sha256="0zj06b8r0hqjczhlryfy8z7jf799gglisv4cxszlzw4wj7byyi9x"; depends=[IRanges]; }; - BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.34.0"; sha256="0scdvj7d6gh78h6l1iv6nrd100i0n51a5dki9nvb7sk76sw06zzk"; depends=[]; }; - BgeeDB = derive2 { name="BgeeDB"; version="2.8.0"; sha256="1bhin7h1bd3wc74af1fms0ha3fy9drij26d1np27knpjs95wygiq"; depends=[Biobase data_table digest dplyr graph RCurl tidyr topGO]; }; - BiFET = derive2 { name="BiFET"; version="1.2.1"; sha256="0wxyy5y1i06x6q6s89iq9mx7lz84pxx3s20za5r3gydrwphgkc9i"; depends=[GenomicRanges poibin]; }; - BiGGR = derive2 { name="BiGGR"; version="1.18.0"; sha256="0p42i0j2sqz9kc79nh0wi7hb7r8y01cs5gczanza59q3amhjidqq"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; - BiRewire = derive2 { name="BiRewire"; version="3.14.0"; sha256="0zawg7gjywf8bsxmr33dj4x0xxy06rxcmimdmwx6flx0igf8xrx0"; depends=[igraph Matrix slam tsne]; }; - BiSeq = derive2 { name="BiSeq"; version="1.22.0"; sha256="0bvq2qn4pn632x8ppqx99ar44xh1nazn34f2jqzhg3m8mc7q5h7c"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; - BicARE = derive2 { name="BicARE"; version="1.40.0"; sha256="1dl1jv927l1ywsccmf662j3dl7m4pnkw8v1lpv47nq49pns0qqsw"; depends=[Biobase GSEABase multtest]; }; - BioCor = derive2 { name="BioCor"; version="1.6.1"; sha256="1zli54qjdywwfjzjkwhldy5ma9k6q5fn52vzzfllhwwkxba6ggn7"; depends=[BiocParallel GSEABase Matrix]; }; - BioMVCClass = derive2 { name="BioMVCClass"; version="1.50.0"; sha256="0kkjj1c0s443agk7kaa1dxda4d1bsmlkxmivz2gvf5bhnbaxjn13"; depends=[Biobase graph MVCClass Rgraphviz]; }; - BioNet = derive2 { name="BioNet"; version="1.42.0"; sha256="1hxlwh3jwgnhs8ma0ky6nk9hm2yphd0g7a7ic32vibmw1xcs8znd"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; - BioNetStat = derive2 { name="BioNetStat"; version="1.2.2"; sha256="0d2kh6bbvbxwd48c9wa6nbaj12mmgikknrsdm13r4va7218d24f5"; depends=[BiocParallel ggplot2 Hmisc igraph knitr pathview pheatmap plyr psych RColorBrewer RJSONIO shiny shinyBS whisker yaml]; }; - BioQC = derive2 { name="BioQC"; version="1.10.0"; sha256="0ip0vvq6ln8ci14g2ynxi2ipz60df6bll3ynk5dchz2zybj9l2c2"; depends=[Biobase Rcpp]; }; - BioSeqClass = derive2 { name="BioSeqClass"; version="1.40.0"; sha256="1wx8pc9xv23w1lh1lz5qgv911yh38dz9h1wa3lp1jwb5hsk1lkzv"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; - Biobase = derive2 { name="Biobase"; version="2.42.0"; sha256="10nr6nrkj5vlq8hsgbhbhv669z0dbpz4m3vz9k32rx1czbrrqwin"; depends=[BiocGenerics]; }; - BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.44.0"; sha256="0sidi2rynhbxmjwd90nccgximv4c60qdw4lc6yrgfi00928xms8d"; depends=[Biobase]; }; - BiocCheck = derive2 { name="BiocCheck"; version="1.18.0"; sha256="0zamvs5jar38293ff27imvwy0ra25y64ls9z8w3q1y4jcp8p8pg7"; depends=[BiocManager biocViews codetools graph httr knitr optparse stringdist]; }; - BiocFileCache = derive2 { name="BiocFileCache"; version="1.6.0"; sha256="0ykcr9saxs0sd03ng6g6r6dzqx28rc6590vfa2jq5sq84w95lxr0"; depends=[curl DBI dbplyr dplyr httr rappdirs RSQLite]; }; - BiocGenerics = derive2 { name="BiocGenerics"; version="0.28.0"; sha256="0cvpsrhg7sn7lpqgxvqrsagv6j7xj5rafq5xdjfd8zc4gxrs5rb8"; depends=[]; }; - BiocNeighbors = derive2 { name="BiocNeighbors"; version="1.0.0"; sha256="1fsb96acidlxwf0h65xv7fnwdi58ckmq00gmwykrlawh88wgn1ll"; depends=[BiocParallel Rcpp RcppAnnoy S4Vectors]; }; - BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.2.1"; sha256="0w0hqdyv580j2lxp0ma74swi0cmzf6z6v5zqnhss8qawmm90cc9x"; depends=[bigrquery ComplexHeatmap DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 httr IRanges magrittr rjson S4Vectors shiny SummarizedExperiment]; }; - BiocParallel = derive2 { name="BiocParallel"; version="1.16.6"; sha256="1iv2xzm6lz371z0llhcxl8hmc5jfw0hjwnf1qc8d7jk9djgcaks2"; depends=[BH futile_logger snow]; }; - BiocPkgTools = derive2 { name="BiocPkgTools"; version="1.0.3"; sha256="0mfxcabkdxsbkk1j3kncn5jhm08b0zi1jjsz7ajkhhw7c9w85gvm"; depends=[BiocManager dplyr DT gh htmltools htmlwidgets httr igraph jsonlite readr rex rvest stringr tibble tidyr xml2]; }; - BiocSklearn = derive2 { name="BiocSklearn"; version="1.4.0"; sha256="08a1jaxhqaxqrhbgkm11isi3d83sbpfjh02nki7rbwffcjim3fy0"; depends=[BBmisc knitr reticulate SummarizedExperiment]; }; - BiocStyle = derive2 { name="BiocStyle"; version="2.10.0"; sha256="01lm8xljilj666fcl3wnw82dxkcxnlr294lddr553rm8xr5nwg31"; depends=[BiocManager bookdown knitr rmarkdown yaml]; }; - BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.8.0"; sha256="1wpihkd5j3v2qls2n67dwydvxk2mjb6cx27if5vxh7v99x3vph04"; depends=[BiocStyle bookdown devtools git2r httr knitr rmarkdown rstudioapi stringr]; }; - Biostrings = derive2 { name="Biostrings"; version="2.50.2"; sha256="16cqqc8i6gb0jcz0lizfqqxsq7g0yb0ll2s9qzmb45brp07dg8f7"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; - BitSeq = derive2 { name="BitSeq"; version="1.26.1"; sha256="19z785hbgal81vywgvxbyr8k99fvyn434f1pzsh67rm8w47gnmv9"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; }; - BrainStars = derive2 { name="BrainStars"; version="1.26.0"; sha256="0ki6jm4ycm3dzdv5fhv7nflpy4zifx364mlq02fq701hjgm36fwf"; depends=[Biobase RCurl RJSONIO]; }; - BridgeDbR = derive2 { name="BridgeDbR"; version="1.16.1"; sha256="09xfcbf9ix25zm7djp306iz6vyx73giamslsndzzpsgcbmg0wadb"; depends=[RCurl rJava]; }; - BrowserViz = derive2 { name="BrowserViz"; version="2.4.0"; sha256="09rdysgw9dxk5qpg7sxw0w3rpcrqjdibvwj3chcpgk6kv5ysfwgj"; depends=[BiocGenerics httpuv jsonlite]; }; - BubbleTree = derive2 { name="BubbleTree"; version="2.12.0"; sha256="0g40mh7b6awdvhqy70mamb33p2qn93z64p770phr8ccyi91dd93j"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; }; - BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.46.0"; sha256="0llfqpjbb4q8m6gjx0jq6nxpylqi7r715srkk41rx1bjs0ykbksg"; depends=[]; }; - BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.46.0"; sha256="089wh0rvcvagfx1v3y3r2k8ncm14j9cls2yaywlza8damlz4fbb5"; depends=[BufferedMatrix]; }; - CAFE = derive2 { name="CAFE"; version="1.18.0"; sha256="0x3hn8c7p3p5m215kjbcgxak4c7807ikxs7k4b1immqzz8m5rfqd"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; - CAGEfightR = derive2 { name="CAGEfightR"; version="1.2.0"; sha256="1xnsbwjnirhh4dsfpxc8f16wxnvabr07yzbbizxqyna0h3hr61s0"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges grr Gviz InteractionSet IRanges Matrix Matrix_utils pryr rtracklayer S4Vectors SummarizedExperiment]; }; - CAGEr = derive2 { name="CAGEr"; version="1.24.0"; sha256="1vin6inq3rlj365bhxpx28rp28isi7967r1plpdyi2lwx2f2d4im"; depends=[beanplot BiocGenerics BiocParallel BSgenome data_table DelayedArray formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; }; - CALIB = derive2 { name="CALIB"; version="1.48.0"; sha256="118sy35hi5p1nkm7ygh4pn7m3855vhywsj66j0v74iis00blpv1z"; depends=[limma]; }; - CAMERA = derive2 { name="CAMERA"; version="1.38.1"; sha256="0mz6ahdyv3334v8fbqan8i6plkyz20smfq4p7hjphcybjfxxsizv"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; - CAMTHC = derive2 { name="CAMTHC"; version="1.0.0"; sha256="1n2hn4snmlfrwr5c9di214sqvgmmihyxnbzbf0n2hx99rrjlzvpg"; depends=[apcluster Biobase BiocParallel corpcor DMwR geometry NMF pcaPP rJava SummarizedExperiment]; }; - CATALYST = derive2 { name="CATALYST"; version="1.6.7"; sha256="08dfjyay6b2ja9jykpzfycnyd9y20pysmshbw5vd5fb69mcjii8q"; depends=[Biobase circlize ComplexHeatmap ConsensusClusterPlus data_table dplyr drc DT flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra htmltools limma magrittr matrixStats nnls plotly purrr RColorBrewer reshape2 Rtsne S4Vectors scales scater shiny shinyBS shinydashboard shinyjs SingleCellExperiment SummarizedExperiment]; }; - CAnD = derive2 { name="CAnD"; version="1.14.0"; sha256="0h1ry4z9g4daga7jqnm2wh631d4yzp738yf1vpxvf2d3f2qci8dv"; depends=[ggplot2 reshape]; }; - CCPROMISE = derive2 { name="CCPROMISE"; version="1.8.0"; sha256="1kpz5cwx0bk55w8paldvmvmgprxsrgyqf8r3vxns136ksv1a1zhx"; depends=[Biobase CCP GSEABase PROMISE]; }; - CEMiTool = derive2 { name="CEMiTool"; version="1.6.11"; sha256="1wypc50kq5y6bnwrfkqz50wckb65bxw294472hnzk4vmaiyymvck"; depends=[clusterProfiler data_table dplyr DT ff ffbase fgsea GeneOverlap ggdendro ggplot2 ggpmisc ggrepel ggthemes gRbase gridExtra gtable htmltools igraph intergraph knitr limma matrixStats network plyr pracma RColorBrewer rmarkdown scales sna stringr tidyr WGCNA]; }; - CFAssay = derive2 { name="CFAssay"; version="1.16.1"; sha256="1l8l157df163cy4i6qc1q95x1pqc80y7dp5jf9nfssgbkls2dpfv"; depends=[]; }; - CGEN = derive2 { name="CGEN"; version="3.18.0"; sha256="0p0c05axpj94v3gksy065244vlxh9q4g6ifv07jxrvl23ji4bnyi"; depends=[mvtnorm survival]; }; - CGHbase = derive2 { name="CGHbase"; version="1.42.0"; sha256="0ghxp49xdi09p3f2qwrdrq2p4qjafj4z1rr08ycgbf11gb22h1sc"; depends=[Biobase marray]; }; - CGHcall = derive2 { name="CGHcall"; version="2.44.0"; sha256="1k65kaiqvjyllzbpa2367n6f6kkmsy463kpflzs66hqhx2fshsmi"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; - CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.36.0"; sha256="1j92x5dyxp6hjj87g1hgw5q8fd4k2q5rb97ir47xkalkcskg0ddh"; depends=[Biobase CGHbase CGHcall]; }; - CGHregions = derive2 { name="CGHregions"; version="1.40.0"; sha256="04j87bd2ygda6np72vs1bx857y5mbaga19ky6pgyxv9lahi62xyw"; depends=[Biobase CGHbase]; }; - CHARGE = derive2 { name="CHARGE"; version="1.2.0"; sha256="0230pvgsf775lq4n9cpxb95bqq438f4z0wx9mmbj4yir8bljy0mk"; depends=[cluster diptest factoextra FactoMineR GenomicRanges IRanges matrixStats modes plyr SummarizedExperiment]; }; - CHRONOS = derive2 { name="CHRONOS"; version="1.10.1"; sha256="03j4qcak7bpgw80gzxb2mj6k134jqp5frzd5ls6b5290lkknj720"; depends=[biomaRt circlize doParallel foreach graph igraph openxlsx RBGL RCurl XML]; }; - CINdex = derive2 { name="CINdex"; version="1.10.0"; sha256="0c4p3v9a0njf28gdhvdbnydlhjgpnwzakhnvkvngs3mhbwpy9ih5"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; - CMA = derive2 { name="CMA"; version="1.40.0"; sha256="1v77yiqmvd90pxbs64xfpglwy006w88b4zrb5rk90r0vasnvdl5n"; depends=[Biobase]; }; - CNAnorm = derive2 { name="CNAnorm"; version="1.28.0"; sha256="050yhjqqqm5kqjpw2ar8gf0yjqzmr0xzwa0c10dfry6hml63d6m3"; depends=[DNAcopy]; }; - CNEr = derive2 { name="CNEr"; version="1.18.1"; sha256="1h8p7fibhyn7117qwjrl9f7y5cczv50qihzfd83pj76z5k5ylzry"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; - CNORdt = derive2 { name="CNORdt"; version="1.24.1"; sha256="1frvylz88524nac6wk4r9j0wfvywzf8dq998pfnl9km7q4f888i0"; depends=[abind CellNOptR]; }; - CNORfeeder = derive2 { name="CNORfeeder"; version="1.22.1"; sha256="1h6l5lq0xqzh4y7mrq2kvnj3gpv3ni9c8qdn1wnrsa8q0i8xcs9v"; depends=[CellNOptR graph]; }; - CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.24.0"; sha256="140a42s9h7li597y45z3dmb8y1nf53xxl7vnipi8k0rgcix465dl"; depends=[CellNOptR nloptr]; }; - CNORode = derive2 { name="CNORode"; version="1.24.1"; sha256="04zf8cidpw1f7zdyd7ns4x84jpdvbvkg5zifw0w1hri70n8yl8r4"; depends=[CellNOptR genalg]; }; - CNPBayes = derive2 { name="CNPBayes"; version="1.12.0"; sha256="1vlbnlr63vv2s5nyndiqcb3kh737apswqqygwqn5pz6973nvlcl3"; depends=[BiocGenerics coda combinat dplyr GenomeInfoDb GenomicRanges ggplot2 gtools IRanges magrittr matrixStats mclust purrr RColorBrewer Rcpp reshape2 S4Vectors scales SummarizedExperiment tibble tidyr]; }; - CNTools = derive2 { name="CNTools"; version="1.38.0"; sha256="038nbqgjahc9b646s9avxgccxz1qsly8vqj84dzqwgpyvx7hxqpi"; depends=[genefilter]; }; - CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.14.0"; sha256="0fh94iv66li3zsnadxyxwzhs1jcz63vpmc6khp0srac2kzvc1kcs"; depends=[exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; }; - CNVrd2 = derive2 { name="CNVrd2"; version="1.20.0"; sha256="10141xwwkzrkgkad8x5y1ha779b47vp7b2qk32hgw19ys4lraj79"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; - CNVtools = derive2 { name="CNVtools"; version="1.76.0"; sha256="0xmqqq3j3xxm1pnldw6l3vnww9lfjlghvkrfzfbwxmq8gkxmyzji"; depends=[survival]; }; - COCOA = derive2 { name="COCOA"; version="1.0.2"; sha256="1y7y3zjzpljfqdhal87xir9z50xg8p96n0yx98qz1lqairbdkcpj"; depends=[Biobase BiocGenerics ComplexHeatmap data_table GenomicRanges ggplot2 IRanges MIRA S4Vectors tidyr]; }; - CODEX = derive2 { name="CODEX"; version="1.14.1"; sha256="0k8x1k1m11r69dbzrxqx9b1pqi5x3pf1cxyf5j4hz7qsk8fncsnq"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; - COHCAP = derive2 { name="COHCAP"; version="1.28.1"; sha256="1zn0skpi7h2nws877bj1van3358cmh88prvj9691kwcwj47h1zny"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; }; - COMPASS = derive2 { name="COMPASS"; version="1.20.1"; sha256="0jhi9dhyfdnc9fmybj2q9vcshkikn9rhcdzfr9hi2jizh7pa4w8z"; depends=[abind BiocStyle clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; }; - CONFESS = derive2 { name="CONFESS"; version="1.10.1"; sha256="0w32gz85balsy88q17g303nbn1c8b2gp7cxqqx9vwsvzvd7d78p1"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; - CORREP = derive2 { name="CORREP"; version="1.48.0"; sha256="1jg2j61f3cz7c7xf9wm96gvl5ykc8vbb14vhrbcmibjzxf7zfd1r"; depends=[e1071]; }; - COSNet = derive2 { name="COSNet"; version="1.16.0"; sha256="1bw979xx2g17p3pisvbvskv8xq26pqrn9lcq8jh6av8m592b90gp"; depends=[]; }; - CRISPRseek = derive2 { name="CRISPRseek"; version="1.22.1"; sha256="0lpvq8bjjcqz6zn4dnlxjs7vynqmq0cy7jcg9nypmrgjcn0pgc6l"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; }; - CRImage = derive2 { name="CRImage"; version="1.30.0"; sha256="11pzsg1bjsg12ad4vrp8slzr53nynb93i6j9zqgcvzh0dl004ss9"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; - CSAR = derive2 { name="CSAR"; version="1.34.0"; sha256="0r8rqgz95bk7piwhgh4ljr8zvnvgxz7w7h7cjwqywsg259sf54sj"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - CSSP = derive2 { name="CSSP"; version="1.20.0"; sha256="06yzh3kgxwg512ycncxj0ann0m918wyij6xwyz0kskln2vsq84jm"; depends=[]; }; - CTDquerier = derive2 { name="CTDquerier"; version="1.2.0"; sha256="0lpf49gdp5bj83sqv3hnaa4l3lib112m0h4k8zbjvjgkw6inn9wb"; depends=[BiocFileCache ggplot2 gridExtra igraph rappdirs RCurl S4Vectors stringdist stringr]; }; - CVE = derive2 { name="CVE"; version="1.8.0"; sha256="0fjisya8iipc4ghslaw3di62mmi93v34w1c39a57mqk5gng2pzr7"; depends=[ape ConsensusClusterPlus ggplot2 gplots jsonlite plyr RColorBrewer shiny tidyverse WGCNA]; }; - CancerInSilico = derive2 { name="CancerInSilico"; version="2.2.1"; sha256="1irbgmwfpsjyl8an06qs7x0nh4jrljhklkm3ak2sd13fgg88j73s"; depends=[BH Rcpp]; }; - CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.24.0"; sha256="10768i5ijrwr7hcshk60r5w6ckqacqk3f9jhs3qkm2ic0g47vgwb"; depends=[AnnotationDbi limma qvalue]; }; - CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.8.0"; sha256="1cg1im5p53n5afz0pzfg7l7wp6lm8cl0dr5x8di62va71n9qdk77"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust SNFtool survival]; }; - Cardinal = derive2 { name="Cardinal"; version="2.0.4"; sha256="1119r8993msnldilkp7qv3mslbbv3bfypidnm52cl9ybznlj757r"; depends=[Biobase BiocGenerics BiocParallel dplyr EBImage irlba lattice magrittr matter ProtGenerics S4Vectors signal sp]; }; - Category = derive2 { name="Category"; version="2.48.1"; sha256="18rsxlwa1l06i635cnznb9b2zssqcgb71pihky29gl2gwp7a654b"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; - CausalR = derive2 { name="CausalR"; version="1.14.1"; sha256="0v4k8nbxjf9q092d029pvpy1f29zby8j60b89x559cr2m78zw870"; depends=[igraph]; }; - CellMapper = derive2 { name="CellMapper"; version="1.8.0"; sha256="0qaw5pf3lgdkfcki0z2hp9g0b07j2khinwh9r0ajvji4j7hiwrw5"; depends=[S4Vectors]; }; - CellNOptR = derive2 { name="CellNOptR"; version="1.28.1"; sha256="0ygpryc9sbj031lznlmhr23vgdqgyyyzjx6zbyv2nx703x9vrj3l"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; }; - CellScore = derive2 { name="CellScore"; version="1.2.0"; sha256="0rc77c7z9nsid22yrdny6kd4yg6031njznsdvk6n82mv2sadk51b"; depends=[Biobase gplots lsa RColorBrewer squash]; }; - CellTrails = derive2 { name="CellTrails"; version="1.0.1"; sha256="1x64c4fdwlbf57s4s6zjvpjy8jga7sz790gs6ll1d79smsw3ahql"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; }; - CexoR = derive2 { name="CexoR"; version="1.20.0"; sha256="1pwjq3r7l9hinab38g2v5sjrnbhxva1jfjvh20wh75l2hzfjs62j"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - ChAMP = derive2 { name="ChAMP"; version="2.12.4"; sha256="197b3k61panvxw0vxf8qjj8l86q95mf9al055scpcf7sc6xwz0db"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel FEM GenomicRanges globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva kpmt limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; }; - ChIC = derive2 { name="ChIC"; version="1.2.0"; sha256="190jc1k318bk1xh93h726bxl0711qzn672lri3lwsrbjm76w8m1g"; depends=[BiocGenerics caret caTools ChIC_data GenomicRanges IRanges progress S4Vectors spp]; }; - ChIPComp = derive2 { name="ChIPComp"; version="1.12.0"; sha256="1sypdsvwzssraanlhddhzpf9p0xs3qlflc0hp7yfbp0aplsifx85"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; - ChIPQC = derive2 { name="ChIPQC"; version="1.18.2"; sha256="0khm2y36f92zpwqcqrd8jkrsbgfcir70dwi8zk7pq0hpbpnpl0bm"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; - ChIPSeqSpike = derive2 { name="ChIPSeqSpike"; version="1.2.1"; sha256="0cy2099pc3vcjw47xigiq7qs8czfgaizlqyb5hy4j1lpr5c8qpia"; depends=[BiocGenerics corrplot GenomicRanges ggplot2 IRanges LSD Rsamtools rtracklayer S4Vectors seqplots stringr]; }; - ChIPXpress = derive2 { name="ChIPXpress"; version="1.26.0"; sha256="1b5ss7s8chjm8zgpxkwmghgf2dh1xn225y1qfad838gs0d2rmd5h"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; - ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.4.0"; sha256="115ycr6s5lb9888sz9xxdsip22vnbj1gfavrm61ks12rqf0ch2b6"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RcppRoll ROCR rtracklayer S4Vectors]; }; - ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.6.0"; sha256="1773bpiybn4g9jlv46z29x19q4dpcvn7lairr3lq5pdqbqmz5hnp"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; - ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.16.1"; sha256="1x98d8iwrxjwdz1s5cnvi6flynw9gdkmara9gwf205qxgmy7j3a3"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager biomaRt Biostrings BSgenome DBI DelayedArray ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools S4Vectors seqinr SummarizedExperiment VennDiagram]; }; - ChIPseeker = derive2 { name="ChIPseeker"; version="1.18.0"; sha256="08d8m4svnyki4pg0mwy17p7wi7anw9ba347ck36x8lzbjb8xcmwg"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; }; - ChIPseqR = derive2 { name="ChIPseqR"; version="1.36.0"; sha256="0m9xrb1aksmrh0zm6sa0nklwbn0mydz70dydhycfknv96l0rrxqn"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; - ChIPsim = derive2 { name="ChIPsim"; version="1.36.0"; sha256="096dlqis3mcbhz837ys0n9yimgrh5fw5cpx16kjg9hfs48253nxs"; depends=[Biostrings IRanges ShortRead XVector]; }; - ChemmineOB = derive2 { name="ChemmineOB"; version="1.20.0"; sha256="037j2hwmrbk0k2abygkrkmdshsh1c434dj0iqdmqsnbyyvv34q2m"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; - ChemmineR = derive2 { name="ChemmineR"; version="3.34.1"; sha256="0pzvwaycvz61156ypqf24a42nhhmlhx2hccyra3g0jm97adm69iw"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra png Rcpp RCurl rjson rsvg]; }; - Chicago = derive2 { name="Chicago"; version="1.10.1"; sha256="0m3fv8qgxaysnc02ndmk0bx0rk8ly02nivhn0hzgdh6vbrgqgzdr"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; - ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.36.0"; sha256="0ah133mzrwxdhfazpw41h2h0bz555al9yjlyhahm249d4wbdzr8d"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; - ClassifyR = derive2 { name="ClassifyR"; version="2.2.6"; sha256="1crw7qn6c4h1gx324wgyzjh1z49zb5c43jrl4kiqva8cmds11h46"; depends=[BiocParallel locfit MultiAssayExperiment plyr S4Vectors]; }; - Clomial = derive2 { name="Clomial"; version="1.18.1"; sha256="0m1s90syqm6ll61ii1zms1phrycfngl7r2s7d9lxck19imdg8svz"; depends=[matrixStats permute]; }; - Clonality = derive2 { name="Clonality"; version="1.30.0"; sha256="0nhlrzy6z8kcfghw3ciy4ymbnmwb7y68bb1ikz7fxi4d5pywzm03"; depends=[DNAcopy]; }; - ClusterJudge = derive2 { name="ClusterJudge"; version="1.4.0"; sha256="1yi3hcbk8ka9krrc2q8jv0sq5szpwp3iw3wnn8x9ibn1qyimzwc5"; depends=[httr infotheo jsonlite lattice latticeExtra]; }; - ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.10.0"; sha256="1jwl2v9qja11rrdllqkc2hlqiirzcav7s6343d66qaajq02iagzj"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; - CoCiteStats = derive2 { name="CoCiteStats"; version="1.54.0"; sha256="0ar66vhlw6zhrrf6bpd82hqwxh4g6apic56mx9xir40302ikc1h4"; depends=[AnnotationDbi org_Hs_eg_db]; }; - CoGAPS = derive2 { name="CoGAPS"; version="3.2.40"; sha256="05d8av4q3nvdyf976i9ninb5h3lxk3nr7b327jj7v9qvg9hlmzqh"; depends=[BiocParallel cluster data_table gplots RColorBrewer Rcpp rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - CoRegNet = derive2 { name="CoRegNet"; version="1.20.0"; sha256="1z8ihzn4i9zzn7cw2376j92cx1b0w543vr9f47xkhnsj871f2v6c"; depends=[arules igraph shiny]; }; - CompGO = derive2 { name="CompGO"; version="1.18.0"; sha256="1hzps1isfpdmcxdlpfqhanl0qafydgsgjc5xqxgd8zvib4zb28za"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.20.0"; sha256="0s01dzcfj1lmpqfpsbqw7r4858krfzy499lz4cwx4fq3mbyvy2aj"; depends=[circlize colorspace GetoptLong GlobalOptions RColorBrewer]; }; - ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.46.0"; sha256="00q1xbi7znfvvcqb1szqlw7zh4vvpf1si80k5zylys512ixg9sns"; depends=[ALL Biobase cluster]; }; - CopywriteR = derive2 { name="CopywriteR"; version="2.14.1"; sha256="1hbiw0m9hmx4na9v502pxf8y5wvxzr68r4d3fqr2755gxx86qck6"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; - CorMut = derive2 { name="CorMut"; version="1.24.0"; sha256="1p4xj8f5hf1z31943s51inc0mc28bphzy5qs4ay2nccwshbypq0l"; depends=[igraph seqinr]; }; - Cormotif = derive2 { name="Cormotif"; version="1.28.0"; sha256="0lb691mvr9zim7z5yplncmlzyr799jym1wvrgfm1diqjz2daixai"; depends=[affy limma]; }; - CountClust = derive2 { name="CountClust"; version="1.10.1"; sha256="1b129r97wv3gm25pk3ccg5bmp2476jyhz1pphapqlrb1im3fixq6"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; }; - CoverageView = derive2 { name="CoverageView"; version="1.20.1"; sha256="164lla4v6ll0kqzapm3kmwz39k5shl0cwwashpbwiixrrxhcy8d2"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; - CrispRVariants = derive2 { name="CrispRVariants"; version="1.10.1"; sha256="0n1mw3ybbdaybbcms12cj4vy21wahq5srny0qnbxjlzyl1zjbpr0"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; - CytoDx = derive2 { name="CytoDx"; version="1.2.1"; sha256="05apvaf4dmkdfsp2aary14i7znjyzk0k6rqcbsk6m98fkp3d9r8b"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; }; - CytoML = derive2 { name="CytoML"; version="1.8.1"; sha256="18isg4kjdn975q8vpziisnyxj1jxm4lkq7hi9jy4imf7bffc234i"; depends=[base64enc Biobase data_table flowCore flowUtils flowWorkspace ggcyto graph jsonlite ncdfFlow openCyto plyr RBGL Rgraphviz XML]; }; - DAPAR = derive2 { name="DAPAR"; version="1.14.5"; sha256="0s09y5kpivaichzmfchksaayxchdmqgldcba0waxfxzsapwfb9p1"; depends=[AnnotationDbi Cairo clusterProfiler cp4p DAPARdata doParallel dplyr factoextra FactoMineR foreach ggplot2 gplots graph highcharter imp4p impute knitr lattice limma lme4 Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer readxl reshape2 scales siggenes stringr tidyr tidyverse tmvtnorm vioplot vsn]; }; - DART = derive2 { name="DART"; version="1.30.0"; sha256="0dxwy95p43c0shx30y95sj1pl64kqkh2bsnj680q196zgyg937s6"; depends=[igraph]; }; - DBChIP = derive2 { name="DBChIP"; version="1.26.0"; sha256="1wk8nvfcfhsymhbi6id0kd1jzcykh6hhikl2040g0v6gi252gv2v"; depends=[DESeq edgeR]; }; - DChIPRep = derive2 { name="DChIPRep"; version="1.12.0"; sha256="1avcjr7r54grh3yn5pjbzji3syc8vvah9as7asv3cwmyqzaya4r0"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; }; - DECIPHER = derive2 { name="DECIPHER"; version="2.10.2"; sha256="191s87akdjfqdbq4xvz42s10fpq3w7jm6962ndhcibm8kzgz241r"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; - DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.2.0"; sha256="1a4m4xs8dd0459vh5bhi96w6vchmqgap3snrj8x6jjlpvkkhwl8l"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; }; - DEDS = derive2 { name="DEDS"; version="1.56.0"; sha256="1zfgaar3bpss49zhs81mwlfzkx5lv92j8a64xd12ig88is24cw2c"; depends=[]; }; - DEFormats = derive2 { name="DEFormats"; version="1.10.1"; sha256="01zhxi2gpbdbfxxh8myq7930rk2zcwdchdj7xa2p4hrl2mzhr7c8"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; }; - DEGraph = derive2 { name="DEGraph"; version="1.34.0"; sha256="1vrv3lkda2dhcb9ig38xv0bvnk68z9bpsxr4846fq31dvxp6b5al"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; - DEGreport = derive2 { name="DEGreport"; version="1.18.1"; sha256="0fzxlx1bqcggya5bf7s0w2g368hzcjamq33z8mfj23c1d4dm0jmy"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr lasso2 logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; }; - DEGseq = derive2 { name="DEGseq"; version="1.36.1"; sha256="1p4ldk2wagsnjbxrq3s6fa3l6phqp77hjwv43gbdsh7ph8rzd33g"; depends=[qvalue]; }; - DEP = derive2 { name="DEP"; version="1.4.1"; sha256="0adwq2lgnqf29p1ylq4mvqx16g45bcs79nhsknkl9ph3i7g2slgj"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; - DEScan2 = derive2 { name="DEScan2"; version="1.2.1"; sha256="0l47x2yrxcyj0mfz972acyw2v9n08ib859jb3v9qasrbw04qnvwk"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; }; - DESeq = derive2 { name="DESeq"; version="1.34.1"; sha256="0bpiixczbhlyaiinpbl6xrpmv72k2bq76bxnw06gl35m4pgs94p2"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; - DESeq2 = derive2 { name="DESeq2"; version="1.22.2"; sha256="0n5ah84mxn87p45drzy0wh2yknmzj1q5i6gv0v9vgg1lj7awb91r"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; - DEXSeq = derive2 { name="DEXSeq"; version="1.28.3"; sha256="1wsj1kqfrakmjnlplxmrv17r2spzcdkmwdkhggyjbf8mdhqs3w16"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; - DEqMS = derive2 { name="DEqMS"; version="1.0.1"; sha256="1869msy07xh9y0yr0mskrkpmzmf4x3vdarvn8wi78hk1scq1zk71"; depends=[ggplot2 limma]; }; - DEsingle = derive2 { name="DEsingle"; version="1.2.1"; sha256="0w3b7pz04l60hrbw4k7rkp4xmf8hzxca7pgrjyalf946z6yvky0s"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; }; - DEsubs = derive2 { name="DEsubs"; version="1.8.1"; sha256="0whs5q02lgis04zyf6abd9b5phv3bw508k4ngp197ka02pbpvxxz"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; }; - DFP = derive2 { name="DFP"; version="1.40.0"; sha256="12kb7cjsfdscdwanjbzvwgp1ra0kmijrp1qyx87sxsk4hxk236ml"; depends=[Biobase]; }; - DMCHMM = derive2 { name="DMCHMM"; version="1.4.0"; sha256="12jn77dxbcbzbfdsy4l1vycf68bnw2wdhrwnnjc3829arcz2mkph"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; - DMRScan = derive2 { name="DMRScan"; version="1.8.0"; sha256="0vwmkw3abs0v8z49qdkrqxia0kn5i3pl7yqzv42l5xz7d2498s7q"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; - DMRcaller = derive2 { name="DMRcaller"; version="1.14.2"; sha256="13x59irimrjff2pa9vw9yw341xm13wxfzhrfv4ylw60jpzbz71i1"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; - DMRcate = derive2 { name="DMRcate"; version="1.18.0"; sha256="0930rrz2aps91mcqihap9830km9x7if6vgpvjplmacvs1x2k3wyh"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors]; }; - DMRforPairs = derive2 { name="DMRforPairs"; version="1.18.0"; sha256="11gbnxlkgkx9ynmslxvinfnq39rpg392zbff6g36fd5nsr3dppxd"; depends=[GenomicRanges Gviz R2HTML]; }; - DNABarcodes = derive2 { name="DNABarcodes"; version="1.12.0"; sha256="0g6j7ish0fk9jcib94wssjgp1m8ldcp42hyyg1ypr945fa3xghx0"; depends=[BH Matrix Rcpp]; }; - DNAcopy = derive2 { name="DNAcopy"; version="1.56.0"; sha256="04cqdqxhva66xwh1s2vffi56b9fcrqd4slcrvqasj5lp2rkjli82"; depends=[]; }; - DNAshapeR = derive2 { name="DNAshapeR"; version="1.10.0"; sha256="1rplgi36jn33npihhmk0vdsiali814y5v1wz5fdna3k9b47id6b6"; depends=[Biostrings fields GenomicRanges Rcpp]; }; - DOQTL = derive2 { name="DOQTL"; version="1.18.0"; sha256="0ligqm4l2x5dz794djapri770j27rhibhdzc48y980768gjpkm8k"; depends=[annotate annotationTools Biobase BiocGenerics biomaRt BSgenome_Mmusculus_UCSC_mm10 corpcor doParallel foreach fpc GenomicRanges hwriter IRanges iterators mclust QTLRel regress rhdf5 Rsamtools RUnit VariantAnnotation XML]; }; - DOSE = derive2 { name="DOSE"; version="3.8.2"; sha256="1gh7dhvfc71kawxcfx8xqlir7mwvg5mmz4lqrdrvw5knvi2h3mfa"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim qvalue reshape2 S4Vectors]; }; - DRIMSeq = derive2 { name="DRIMSeq"; version="1.10.1"; sha256="021xzx7ndvjdahi715qvq2xxnnhdsn9h8g6imps5ls3qmk5024d2"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; - DSS = derive2 { name="DSS"; version="2.30.1"; sha256="0m18793vqaqamx3rj3pwrirc7ygmmg4774il8d59qmwinlppyxqw"; depends=[Biobase bsseq DelayedArray]; }; - DTA = derive2 { name="DTA"; version="2.28.0"; sha256="1gsc6sbi1awi92w1wnqddybz2n2n8f8pvsg95sp90xp11sjrnvvx"; depends=[LSD scatterplot3d]; }; - DaMiRseq = derive2 { name="DaMiRseq"; version="1.6.2"; sha256="0kllq3wndg7p96lqls4xsqdnhrwryry96qxbz5myvdrzywmfppkv"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; }; - DeMAND = derive2 { name="DeMAND"; version="1.12.0"; sha256="06hip99jzi5z89v1mprmqxrziv1zf6lysmg6ixsxaq8f0l9x2m38"; depends=[KernSmooth]; }; - DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.24.0"; sha256="1j5mlnx0n3xn2agnp2wwdbyyf36lh277giapz0sknlnpfdhzc4jn"; depends=[ggplot2 limSolve pcaMethods]; }; - DeepBlueR = derive2 { name="DeepBlueR"; version="1.8.1"; sha256="0vsyndijwax7za0kfp51db73b74blj5hd67jar2icp9fsl02x10a"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; - DelayedArray = derive2 { name="DelayedArray"; version="0.8.0"; sha256="0cl5anqkjwvqx19snjhz0zj8cp8ibckiifl28h821h50g62nvb2f"; depends=[BiocGenerics BiocParallel IRanges matrixStats S4Vectors]; }; - DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.4.0"; sha256="03fk2avl1vyjv2wslczkc82qr0zmp1ra8iimd47pbmnnm839ly4w"; depends=[BiocParallel DelayedArray HDF5Array IRanges Matrix matrixStats S4Vectors]; }; - DiffBind = derive2 { name="DiffBind"; version="2.10.0"; sha256="0j8pal40lr1gv8sss96hhkj7l1qn9sy4q4l2kqd4rfwl7qrcnfw5"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges ggplot2 ggrepel gplots IRanges lattice limma locfit RColorBrewer Rcpp Rsamtools S4Vectors SummarizedExperiment systemPipeR zlibbioc]; }; - DiffLogo = derive2 { name="DiffLogo"; version="2.6.0"; sha256="1an8c2h0vsy8x3q90bgy7gfigz11k460gpi4wlyj6gq8h6bd1fmy"; depends=[cba]; }; - Director = derive2 { name="Director"; version="1.8.0"; sha256="0xzds7gi9bp6hp8dpw9c4ls6b1rcfk4w4my1wacf0z9hnwpd60r3"; depends=[htmltools]; }; - DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.24.1"; sha256="0vazfjzqy78p5g7dnv30lbqbj4bhq4zafd2wh6gdwy2il1fd78xa"; depends=[BiocGenerics IRanges S4Vectors]; }; - DominoEffect = derive2 { name="DominoEffect"; version="1.2.1"; sha256="0lb3s9lzscnqvs3vq6ah1fib5day98y0fnh1gdjrf49fl8fkgx3r"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; }; - Doscheda = derive2 { name="Doscheda"; version="1.4.1"; sha256="01k95cbkwswpnzc53rszsnk55bx6xisdj5i8211h8zgwjsikryik"; depends=[affy calibrate corrgram d3heatmap drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; }; - DriverNet = derive2 { name="DriverNet"; version="1.22.0"; sha256="13yd9inyqkaw363m6apiyclkjpb3f5khbi0vwc90whi8q9wvsl8f"; depends=[]; }; - DropletUtils = derive2 { name="DropletUtils"; version="1.2.2"; sha256="0kxfhd7r2r1p0bmzps0d965l84fk63lc1shqywll5rx0scnhlcsw"; depends=[beachmat BiocParallel edgeR HDF5Array Matrix Rcpp rhdf5 Rhdf5lib S4Vectors SingleCellExperiment]; }; - DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.24.2"; sha256="17x0smsb1kdj87ndw0dakqjb4c2dq2kkv5z8cs3i4x87hz56yrbd"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; - DupChecker = derive2 { name="DupChecker"; version="1.20.0"; sha256="114g9qx4v2lz521pndha3gk0cl2pq1jxqw1z9pzijgdj9lyj0jzv"; depends=[R_utils RCurl]; }; - DynDoc = derive2 { name="DynDoc"; version="1.60.0"; sha256="0k18f07mg7hg085l0pi5j6l8c04m5zd6jx3ha6cpjv6nd0m2lljw"; depends=[]; }; - EBImage = derive2 { name="EBImage"; version="4.24.0"; sha256="18v2zr7xh0d0xbs7mxa2b6xjqlqiml0hji27gq1351xp5bf2pxvx"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; - EBSEA = derive2 { name="EBSEA"; version="1.10.0"; sha256="1cbc21a6habvlslavdpn5v1nxkdhcpqp27fwg5y7hy9c8fqixqq0"; depends=[edgeR limma plyr]; }; - EBSeq = derive2 { name="EBSeq"; version="1.22.1"; sha256="1gzbk1hbwdan0j131ah88yryfvsiq0wqjnb09qbr4qaczpgvbad0"; depends=[blockmodeling gplots testthat]; }; - EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.16.1"; sha256="12ml7qlsf7mnib88lm3q6lb3b34yfj4fgvp9c4vmfj62m88m17xw"; depends=[EBSeq]; }; - EBarrays = derive2 { name="EBarrays"; version="2.46.0"; sha256="1qz1z9v3dc0rdwm33v47avvgvqfxhbzw34idcxa1ap7ynx9c2sqs"; depends=[Biobase cluster lattice]; }; - EBcoexpress = derive2 { name="EBcoexpress"; version="1.26.0"; sha256="12hh2qvv0jfpsd8jz41jvzs605mccj35c5rz54697lgi7pdhwm4l"; depends=[EBarrays mclust minqa]; }; - EDASeq = derive2 { name="EDASeq"; version="2.16.3"; sha256="0559ph606ps2g9bwbl0a2knkcs5w581n9igngpjxvk5p56k24gb5"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics BiocManager biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; - EDDA = derive2 { name="EDDA"; version="1.20.1"; sha256="1psyzqsksmv9w3wwj8h4x1ywkkhk05z71afdxh57lhlh0y4vf6fw"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; - EGAD = derive2 { name="EGAD"; version="1.10.0"; sha256="1krwqspyw63zddgksvjvcidfzcxv9165p5dl3cgh1qsb3s427gla"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; }; - EGSEA = derive2 { name="EGSEA"; version="1.10.1"; sha256="0mimy2k7z3zyxksyax8xbl4yk48986b88x7vnfd2hlhibdcc1wg2"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; - ELBOW = derive2 { name="ELBOW"; version="1.18.1"; sha256="03jk906v6my6xf85ki2af8kd540bjjgn76xq4w38xc4dpfmpypla"; depends=[]; }; - ELMER = derive2 { name="ELMER"; version="2.6.3"; sha256="0x9v0z2b649nwnxaj9fkyrlgqdlxl4cmdm5wmpw8nzn6r432wfmi"; depends=[biomaRt circlize ComplexHeatmap DelayedArray doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr progress purrr readr reshape rmarkdown rtracklayer rvest S4Vectors stringr SummarizedExperiment TCGAbiolinks tibble tidyr xml2]; }; - EMDomics = derive2 { name="EMDomics"; version="2.12.0"; sha256="1savm8vh1cl8s9rw5jy341a6azx1d8pm0935jvl10ai0cs6q1f22"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; - ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.8.0"; sha256="1836v5yj5rr3mvmsakbz5ccqc0h3dngipigszbrzcb2qb9m55gqf"; depends=[data_table dplyr DT jsonlite RCurl shiny shinythemes stringi stringr tidyr]; }; - ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.30.0"; sha256="0ciilgg8mw4lzclfqqgfrc6crig15m418qfpcfk9s4ykcnjzzial"; depends=[rJava XML]; }; - ENmix = derive2 { name="ENmix"; version="1.18.2"; sha256="0fw4bwdi9yax34r50xclzxgjvq2g02ynz9pxyack20xycn3vn3zn"; depends=[doParallel foreach geneplotter impute MASS minfi preprocessCore SummarizedExperiment sva wateRmelon]; }; - ERSSA = derive2 { name="ERSSA"; version="1.0.1"; sha256="02g7kp2g3jxk9fy9fv2b1pkzc46067jwzq4p340w9c8ss8hrpqwh"; depends=[BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; }; - EasyqpcR = derive2 { name="EasyqpcR"; version="1.24.0"; sha256="1znawlhb44j21jhspn703d62pi1zknv1khklmsdlspn5db67wpin"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; }; - EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.10.0"; sha256="05n0984x77kvxjj80vx4sh7sz2v90wzf4vqsgbkn7wm45ly6x3h0"; depends=[]; }; - EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="1.0.1"; sha256="1z7rv5na9j9s95zx0l61ncxxv5a452p0xqfk7p1bdvl3x8ags4mq"; depends=[ggplot2 ggrepel]; }; - EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.12.0"; sha256="1bg3nrlsbfqvkrmwnwyilaniqzkaf2mirdjq58bwvz2022lwyzyg"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; - EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.12.1"; sha256="1jpmwlhdq99rgfk24pj0q72rnsi216i0yzwfc1v959v3p9132qq7"; depends=[AnnotationDbi BiocFileCache biocGraph BiocManager ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview rappdirs ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; - EpiDISH = derive2 { name="EpiDISH"; version="1.4.1"; sha256="1qd4sglib4852igc1hxrrxsr108mil4mj4xxmf61fz45cxq0v262"; depends=[e1071 MASS quadprog]; }; - EventPointer = derive2 { name="EventPointer"; version="2.0.1"; sha256="0rx31xj13m340m1jfms4bzb5c6shmnh4rrzlv3qcjf6zfgh3n118"; depends=[affxparser cobs doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph IRanges limma MASS Matrix matrixStats nnls prodlim qvalue RBGL rhdf5 S4Vectors SGSeq stringr SummarizedExperiment]; }; - ExCluster = derive2 { name="ExCluster"; version="1.0.1"; sha256="0msz6fd81gyvix0jmh5mnpp4kfhkj6whl0q5l905abnncn2mfgpr"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; }; - ExiMiR = derive2 { name="ExiMiR"; version="2.24.0"; sha256="1nyyvznjvp9rrgzdp63klq3gah8w1qvgi4hkjf9icwc5liszr48j"; depends=[affy affyio Biobase limma preprocessCore]; }; - ExperimentHub = derive2 { name="ExperimentHub"; version="1.8.0"; sha256="1cxdkzkb4rkzsxcva9ich7p9ysdhijqrmacq1hvciyjrj0ql69w4"; depends=[AnnotationHub BiocGenerics BiocManager curl S4Vectors]; }; - ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.8.0"; sha256="09b64x0rh6j83cwvv0hbwydlcxyp032c8m3h20k8kylkpiyx3csq"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocManager biocViews curl DBI ExperimentHub graph httr S4Vectors]; }; - ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.10.0"; sha256="0ll7nhzqn25jwfkxg7cq156hhaiwdcm3fbbwy4891fb8pl4fj81a"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; - ExpressionView = derive2 { name="ExpressionView"; version="1.34.0"; sha256="0rar2h2qfhqbxs4haxfm6gfvhdmlr1wdp8ashkxkpx97svd4pa3x"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; - FCBF = derive2 { name="FCBF"; version="1.0.1"; sha256="0j5znaw4v0mcz5jyqfm9v599sn472x73x6b9a2jxgynzhnvkbyiq"; depends=[ggplot2 gridExtra SummarizedExperiment]; }; - FELLA = derive2 { name="FELLA"; version="1.2.0"; sha256="09ljq7wfmm30h93k3ig4iqa7hq13lv961s446wiq0b5yi9s0y72g"; depends=[igraph KEGGREST Matrix plyr]; }; - FEM = derive2 { name="FEM"; version="3.10.0"; sha256="1cqba4j2ajyrjyqwp3q2f89afx74603m5pbsjgflc8zfpf498rgl"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; - FGNet = derive2 { name="FGNet"; version="3.16.0"; sha256="12wv1r60nga4llvrx6blv9s6vlpcy22rz72qbf0ixpf16g16yc1x"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; - FISHalyseR = derive2 { name="FISHalyseR"; version="1.16.0"; sha256="0gkghipxbdpb3x55j9n583mi1z9cai8g8xcmyj5337dccx91lfag"; depends=[abind EBImage]; }; - FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.18.0"; sha256="0pw7r0w4ppv7jkjrx88a3bj85d96si1f0hqh7a5gpfb2593fd14k"; depends=[fda MASS]; }; - FamAgg = derive2 { name="FamAgg"; version="1.10.4"; sha256="0fkpcamaav0nlsg0j5dl6l7zfn9z6nrrm8avk8waxnxsghanbc6h"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; - FastqCleaner = derive2 { name="FastqCleaner"; version="1.0.0"; sha256="0v18zhzh8xd5b7828nnvlxc8gzwjgc9hnhznjd3w62js2yg9xv4l"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; }; - FindMyFriends = derive2 { name="FindMyFriends"; version="1.12.0"; sha256="1yyzqw9hzyxh2sjw8wj3xi5cvkcr9ssnahhwaqrln5zsiq72kn70"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; - FitHiC = derive2 { name="FitHiC"; version="1.8.0"; sha256="15xd8mz7660q4zr9p74mq1pqps4iz7pxp8f9ifn21gwg94aq1avn"; depends=[data_table fdrtool Rcpp]; }; - FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.14.1"; sha256="1j059f4hl41kwi6dcjmk8q0hlas7szlzgrvpjvjjcc466c074jhl"; depends=[jsonlite RCurl XML]; }; - FlowSOM = derive2 { name="FlowSOM"; version="1.14.1"; sha256="1s0yjg3jz4v7h60agwzchxa7xzmxszxawcqip4yhspihjpldiw0q"; depends=[BiocGenerics ConsensusClusterPlus flowCore flowUtils igraph tsne XML]; }; - FoldGO = derive2 { name="FoldGO"; version="1.0.2"; sha256="0wgb2zmn3ag2wj752r7gs066dpfdvwk6h87clz414iwp6gi480hq"; depends=[ggplot2 tidyr topGO]; }; - FourCSeq = derive2 { name="FourCSeq"; version="1.16.0"; sha256="1mknsjif4rv1wg5whv8dvkam2fblm2mnvj4qzv12ypnay0hdj8jq"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; - FunChIP = derive2 { name="FunChIP"; version="1.8.0"; sha256="1b8a2hd5i4zwq28i7zwz8g3b9w2wgrhdrghr70z5n62cxdrbdwd9"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; }; - FunciSNP = derive2 { name="FunciSNP"; version="1.26.0"; sha256="1l3p3s9l56ivgwzkixxr51n86s2p91rqayhz605iqpfpxyywyxzg"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - GA4GHclient = derive2 { name="GA4GHclient"; version="1.6.0"; sha256="03jk92nrd8n34z0kb88qsv7pxwwrwy7vjhczxz4a9mqwsb2gv891"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; }; - GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.4.0"; sha256="18g9bhn9wkmfw4f55lly97hf00f6ngh560b87nxyx0c9ls0a6wyg"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; }; - GARS = derive2 { name="GARS"; version="1.2.0"; sha256="1i9dfh9g4sx40r8jdwiv81609jgpaby38hvrvgcf6bw06hip6da4"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; }; - GAprediction = derive2 { name="GAprediction"; version="1.8.1"; sha256="1aybcbaxbwfd9fd1ivkfmhwsm3w9237bf1kph40kdis4zhvf7g1d"; depends=[glmnet Matrix]; }; - GDCRNATools = derive2 { name="GDCRNATools"; version="1.2.1"; sha256="0gwf534xkdg9ajlmhaicpl51kyk74hy7inp83nq4l6gr238x0q85"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; }; - GDSArray = derive2 { name="GDSArray"; version="1.2.0"; sha256="1yjrdnkbgxdfs5i2s10idy3szc9p6fcq6mv246hbsibl6zxxlqlh"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; }; - GEM = derive2 { name="GEM"; version="1.8.0"; sha256="008y135dahsrbk2ik5b7hrsjkhg23cxmsfnbyggm000dap6j4a3w"; depends=[ggplot2]; }; - GENESIS = derive2 { name="GENESIS"; version="2.12.4"; sha256="0ij4cmh01khyqxvv5y5n3h53xhhlm5qj8ijcqqg5mp7byn9nzvvc"; depends=[Biobase BiocGenerics data_table dplyr foreach gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; }; - GENIE3 = derive2 { name="GENIE3"; version="1.4.3"; sha256="1wbgfmv2266djrl71cnhgs89ariw9fncf0kbmz3ps6rc4cm0cj77"; depends=[reshape2]; }; - GEOmetadb = derive2 { name="GEOmetadb"; version="1.44.0"; sha256="05iwq2qglkc3xdkvc1049m1mzyiw91dmfb41vkqbqkyw7jc4561h"; depends=[GEOquery RSQLite]; }; - GEOquery = derive2 { name="GEOquery"; version="2.50.5"; sha256="074dl00c8yi1ihpjkw7vl9vy2hggvipib0jn0hli0wrw7x1h9hg6"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; - GEOsubmission = derive2 { name="GEOsubmission"; version="1.34.0"; sha256="1wiaik74yr84jppvq3hqijha2z4m3jr77q2k9zsr6kw0d82ianvw"; depends=[affy Biobase]; }; - GEWIST = derive2 { name="GEWIST"; version="1.26.0"; sha256="0gdq54rjfwlriv61sn0d9v08cfiz1p80p4asb13r05paa25w7vkm"; depends=[car]; }; - GGBase = derive2 { name="GGBase"; version="3.44.0"; sha256="023yzz4sin86fmkl2d0855mkn7iffhvinnz1hchx88f17rn8ysgz"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; - GGtools = derive2 { name="GGtools"; version="5.18.0"; sha256="1iqzqmcz8v4gmbcmxmla60848pmwlsbhrj9g8skxfclg7w21qx1m"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; - GIGSEA = derive2 { name="GIGSEA"; version="1.0.0"; sha256="08q4askg07y6pz4j04rd4l1rralx22z4nfw6r2y8b79lcm6svawl"; depends=[locfdr MASS Matrix]; }; - GISPA = derive2 { name="GISPA"; version="1.6.0"; sha256="0xdqfv6ihn4qm1mv1xixyav921scvi406jz00n92jb7lwqm4aadw"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; }; - GLAD = derive2 { name="GLAD"; version="2.46.0"; sha256="0mj250k9q78z9s5xy2jra3lazv8nva6ngln8pqxdxhlcnrsrw0nk"; depends=[aws]; }; - GMRP = derive2 { name="GMRP"; version="1.10.1"; sha256="187h6fqy5rcrfb5wnvyg078bzxlb5fhbb4xs34r27pyj8xzbza9r"; depends=[diagram GenomicRanges plotrix]; }; - GOFunction = derive2 { name="GOFunction"; version="1.30.0"; sha256="1rsx1nkxyxd4dv4bn4mm1wyq6l0qn7a1gm60j03y9h4idp3hrgr8"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; }; - GOSemSim = derive2 { name="GOSemSim"; version="2.8.0"; sha256="0ckihpy8jmgn2np1avprz76v9z7i5hqm2gj514c6dmmq3csbc7ib"; depends=[AnnotationDbi GO_db Rcpp]; }; - GOSim = derive2 { name="GOSim"; version="1.20.0"; sha256="00pl7xhs7mskkkmv45fcr448gbvr92v7xc43y0wyj3zrjh1fdm11"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; - GOTHiC = derive2 { name="GOTHiC"; version="1.18.1"; sha256="12gagxspz8d0w9yng6bvkckvws428m36589drj4mz7pjv3gyy2j3"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; - GOexpress = derive2 { name="GOexpress"; version="1.16.1"; sha256="1fh91vh3q6wzgnc71arpl7ahsk868sc3k4h6y9asch4dlhm9qzvh"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; }; - GOfuncR = derive2 { name="GOfuncR"; version="1.2.0"; sha256="021kgcbm8n2yalhzab11cyppwznlkglynnh45wsgy9i2vi2n2znk"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; }; - GOpro = derive2 { name="GOpro"; version="1.8.0"; sha256="1z2lyhnzqvrqfjzavwriaxxzbvbjhjaciyr9azkq296mj3cdih3v"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; - GOstats = derive2 { name="GOstats"; version="2.48.0"; sha256="0wlqqgfynwqnqhckhsfjwg9zkj6hkmzwd5y76dhqz720vy21rcln"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; }; - GOsummaries = derive2 { name="GOsummaries"; version="2.18.0"; sha256="0cmb08w5xjqpdjqjkrwqdfiyf1sfj1xqqlyjq9hv0ynjab6skhvm"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; - GRENITS = derive2 { name="GRENITS"; version="1.34.0"; sha256="0a2wdsaga0k5x37qad53fdvpp4smmpkfp9f7vy8r9mvr69j3ji9n"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; - GRmetrics = derive2 { name="GRmetrics"; version="1.8.1"; sha256="1ak5n76ig3f1bl60in01dbz07vgs2gd65dq18qgrd07dyd20f6xs"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; - GRridge = derive2 { name="GRridge"; version="1.6.0"; sha256="0l6r36kzdmgcamjzzrjchz0q4k9dsxvmdvrrnq1br1xlhgscqc85"; depends=[glmnet graph Iso mvtnorm penalized survival]; }; - GSALightning = derive2 { name="GSALightning"; version="1.10.0"; sha256="0d1zfxzhcgb6h6p8pcfra9ck031n4yb309m17zbql1ld911nv297"; depends=[data_table Matrix]; }; - GSAR = derive2 { name="GSAR"; version="1.16.0"; sha256="1jdjr432i0njpfmymzbv4irf786hrp1wk4vy4sk2x0hcbjigds5z"; depends=[igraph]; }; - GSCA = derive2 { name="GSCA"; version="2.12.0"; sha256="08j8n9hjaf872c1n7ilzhm96d0hb4qa6l30qq516jpynxf326g2w"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; - GSEABase = derive2 { name="GSEABase"; version="1.44.0"; sha256="110al7x0ig8plzrprvhwc7xshi1jzpj2n8llhhg2fh6v6k0k6awr"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; - GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.2.1"; sha256="142x3mx8cknca82hj93l397566rliqmq9z888v1b4ip0vd87qk4l"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub GEOquery KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO rappdirs S4Vectors SummarizedExperiment]; }; - GSEAlm = derive2 { name="GSEAlm"; version="1.42.0"; sha256="16xflz0ad07qy3cl9r4qvi98hlxs2j9wm7dsbw518qkacynpc29g"; depends=[Biobase]; }; - GSRI = derive2 { name="GSRI"; version="2.30.0"; sha256="16zxia3ksgx14rafkjbxbic2rnskh7hql7ifi45n8gg0mkhw535c"; depends=[Biobase fdrtool genefilter GSEABase les]; }; - GSReg = derive2 { name="GSReg"; version="1.16.0"; sha256="08fasaa8inivgs3li8z0yhs2qaa878lrjymk67f8622wlskvmqcd"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; - GSVA = derive2 { name="GSVA"; version="1.30.0"; sha256="0q8jwmxv2w5m7z4i7ggdzm2z627484vn5rm0qfxkkqna3hpjnl4i"; depends=[Biobase BiocGenerics geneplotter GSEABase shiny shinythemes]; }; - GUIDEseq = derive2 { name="GUIDEseq"; version="1.12.1"; sha256="1z6y53z58rmvhaw0qd69xfh45fjcmz0r5m02l3lxkxr7b2ca3vcf"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; - GWASTools = derive2 { name="GWASTools"; version="1.28.0"; sha256="1g039bg6pcbxnz9zyzknrl9qx6wzncqjw4lpiy1lq4pc91lqzjln"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; - GateFinder = derive2 { name="GateFinder"; version="1.2.1"; sha256="1figmf8cpz1mfrcz69jfrxprl88aw01jb30pq3bi2n1r3dyvyxzp"; depends=[diptest flowCore flowFP mvoutlier splancs]; }; - GenRank = derive2 { name="GenRank"; version="1.10.0"; sha256="1fs9kfpm1xcdkyfc52hyysxwdb86aghcgig0jam3cvvfgnpm4xk9"; depends=[matrixStats reshape2 survcomp]; }; - GenVisR = derive2 { name="GenVisR"; version="1.14.2"; sha256="1sidsnzz6hfw072fk5n4i2v7ib9p0fm77p1vf26kgm0xi32ld679"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI FField GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; }; - GeneAccord = derive2 { name="GeneAccord"; version="1.0.0"; sha256="1g1rjgvqnf3bqa4phj0q4gzrm3y6ijbxzyjz83ilwdmwxd4vs5rw"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; }; - GeneAnswers = derive2 { name="GeneAnswers"; version="2.24.0"; sha256="0cx6k2m3cllj0hvfmznkydwnw96q5a6k4781jiix7n9j97ys1rf5"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; - GeneBreak = derive2 { name="GeneBreak"; version="1.12.0"; sha256="049876x0665zv2apxf48hc5yqi7nbh89sqxlgyfqc2vk4knjgkbj"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; - GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.28.0"; sha256="12ww6hlgpxchlvrcc0va4x0ayb3119kakmm4yfscbp2xiy1dlinj"; depends=[Biobase PGSEA]; }; - GeneGA = derive2 { name="GeneGA"; version="1.32.0"; sha256="1z83rrlp82q56wp3ywbacrh8ws5rhqn572p94hqj895jb3b2w3km"; depends=[hash seqinr]; }; - GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.8.0"; sha256="12bx94xw3pmsnwqb4ksgz9ydn8581x2pdvbdba8p7cwcwbkp2lfk"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm plspm rioja Rsamtools snpStats]; }; - GeneMeta = derive2 { name="GeneMeta"; version="1.54.0"; sha256="0cwnhr98sc2xb9y7k4c502r1s1pwlwimpajfp7q34qs3w10sj8my"; depends=[Biobase genefilter]; }; - GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.24.1"; sha256="1hjaqw2zzyszkrp38mki04bljcpsxbdxf93bkcccq9x4yrv0lgas"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; - GeneOverlap = derive2 { name="GeneOverlap"; version="1.18.0"; sha256="1p87ngk0lfbb86hwx63x4xjnw77xslh5a7136l1dwia24r9dccls"; depends=[gplots RColorBrewer]; }; - GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.38.0"; sha256="1f266nq1179gyxqwn0pbbwia04hsshs4653flgm2730cyczq58ki"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; - GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.26.0"; sha256="1kv81bn9kr3lf41zhixr56ipsxf2ig1zny742494r3j8d4wi947p"; depends=[Biobase limma MASS survival]; }; - GeneSelector = derive2 { name="GeneSelector"; version="2.32.0"; sha256="0hjrwj7z67j6rmfvcd44j4284v3dq7qjcm24arnfskja5zk8zb6j"; depends=[Biobase limma multtest samr siggenes]; }; - GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.2.1"; sha256="1rqw74rj3x9f4sslsamsz7g1k835qp76qhxz7i7sxvgi3gv21m9g"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; }; - GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.50.0"; sha256="1pzqdrny4hx6sxnc9glhb5plgrahfdckmcr7symykcc8d896payl"; depends=[gmodels gtools mvtnorm]; }; - GeneticsPed = derive2 { name="GeneticsPed"; version="1.44.0"; sha256="00v32167gl0kkglrzl3xm5bw7p8mfc933k074mf9lpbbf9s1liy7"; depends=[gdata genetics MASS]; }; - GenoGAM = derive2 { name="GenoGAM"; version="2.0.3"; sha256="09c7bk6jmfslr5clnrxp8f9s1fkq83w51nbj25akl3b8p5y5nagh"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; }; - GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.42.0"; sha256="0n3nbhgwnd09fnn7pyaa8n46hhjrz1gkvzbjjf7p9clv6p937y18"; depends=[biomaRt]; }; - GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.18.2"; sha256="07bm35jcczpyxap0b3gky4b28z38z423sngzsm19d9krjxr76b5p"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; - GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.18.1"; sha256="1maslav2r34wjyzh2nlwa862in1ir7i5xk57nw2nlfh5gqy112jd"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; - GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.6.0"; sha256="00xlskvrcjmj28mqkdi2d4ksqsb603g6wckqvzqyjr417xyyanrl"; depends=[dplyr GenomicRanges httr IRanges jsonlite lazyeval magrittr rappdirs readr S4Vectors SummarizedExperiment xml2]; }; - GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.34.8"; sha256="1sxp86hdsg32l2c85jgic65gy92d8kxsm01264hrx6yikdhicjax"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; - GenomicFiles = derive2 { name="GenomicFiles"; version="1.18.0"; sha256="0qf2yj4lfnnk64fk125n8sqms01shfqiik04nasx2z3k129ykpxp"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.16.0"; sha256="0zy5isp2lqpjm0n0n1gly5bs4izn22yciibyqrnlrr60rmn5s67q"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; - GenomicRanges = derive2 { name="GenomicRanges"; version="1.34.0"; sha256="0bgh14d15dpf2iy36qinw45r6n45rqkf0ghazrdl3jfva6vbrb29"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; - GenomicScores = derive2 { name="GenomicScores"; version="1.6.0"; sha256="0lrhkcblvnki6kncwpavs01gbcz22yza6ma8zvfmbrrkfaxqzh8n"; depends=[AnnotationHub Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors XML]; }; - GenomicTuples = derive2 { name="GenomicTuples"; version="1.16.0"; sha256="1d5bdsrs521rxnwiy2xg09d95p45n68dsqq17m4xw3xnfyfzpn3s"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; - Genominator = derive2 { name="Genominator"; version="1.36.0"; sha256="0lv8ar4z086k8hfjl187klv4yqsb2dawp0xvly6bz6pj3prrih50"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; }; - Glimma = derive2 { name="Glimma"; version="1.10.1"; sha256="1ihrww55sa7ipi1rpp0rmn081sbqdwdmm5mz30zfrjr1xxqcdbcv"; depends=[edgeR jsonlite S4Vectors]; }; - GlobalAncova = derive2 { name="GlobalAncova"; version="4.0.0"; sha256="1fzd5122z8d68f4brsp2cv8bqcz9yjh5p41pgn6phqkkzjwj9ivg"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; }; - GoogleGenomics = derive2 { name="GoogleGenomics"; version="2.4.0"; sha256="0xcj10r85hxh5qy43cjb6ypd849b5wphhhv528simxq4glhgrhxp"; depends=[Biobase Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; }; - GraphAT = derive2 { name="GraphAT"; version="1.54.0"; sha256="1xfd0i0j1fai58c15mc3lrg2jc4iwswyfpyg0ff5hnyhmgr3wnsa"; depends=[graph MCMCpack]; }; - GraphAlignment = derive2 { name="GraphAlignment"; version="1.46.0"; sha256="1qql33ikps9x0dkvc31sxvyf8w119ax7519v5bv35s3i5yxh16i6"; depends=[]; }; - GraphPAC = derive2 { name="GraphPAC"; version="1.24.0"; sha256="0dwh3xshp74isq3rljlivks04mw4r0vgzg74qwyc2ar5b2j96bbg"; depends=[igraph iPAC TSP]; }; - GreyListChIP = derive2 { name="GreyListChIP"; version="1.14.0"; sha256="1hsjv4r88ldb7pgl5a3im8vdhmbiaj0rrn0clij7jfh5p5r81r1r"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; - Guitar = derive2 { name="Guitar"; version="1.20.1"; sha256="1d4j54jdnsi8gi6p0kk6zxkk6kzd1r1k77mw142xlvh8b6zrl3nq"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer]; }; - Gviz = derive2 { name="Gviz"; version="1.26.5"; sha256="1dpkcaar7qgzg3vgafvkplprhwmhzpb7ph009kr6ajm36hx4z81c"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; - HDF5Array = derive2 { name="HDF5Array"; version="1.10.1"; sha256="1qwdsygcadl58qj598hfyvs8hp0hqcl9ghnhknahrlhmb7k2bd2d"; depends=[BiocGenerics DelayedArray IRanges rhdf5 S4Vectors]; }; - HDTD = derive2 { name="HDTD"; version="1.16.0"; sha256="1girysaq3w4vfmrdb4vx2g0z9f4nb7ly44b72yhvw9fxsdjzbsc5"; depends=[Rcpp RcppArmadillo]; }; - HELP = derive2 { name="HELP"; version="1.40.0"; sha256="0l6ysv1wdivimvn895alshz6v6avvp7y2gmdphg4iqrmvmjzsd36"; depends=[Biobase]; }; - HEM = derive2 { name="HEM"; version="1.54.0"; sha256="0nkxr9kihihmvap24ir3mgzyq5zq2ng484z9byq5yrbm69wrk887"; depends=[Biobase]; }; - HIBAG = derive2 { name="HIBAG"; version="1.18.1"; sha256="0wgkvqkyv526hdq5n3z27qfk1axbpj5ab6rdlrvjf4fw1v54whmv"; depends=[]; }; - HIREewas = derive2 { name="HIREewas"; version="1.0.2"; sha256="1l0q9x8c4fapa3qkcb3ny3bfvlwwmyl1mvv1hmxqw514ch5ylaiy"; depends=[gplots quadprog]; }; - HMMcopy = derive2 { name="HMMcopy"; version="1.24.0"; sha256="0kn9cqslx6hf70r2gr8x7dwcmvgnf9c3hxrwmvr4vbkl4d3xg8ic"; depends=[geneplotter IRanges]; }; - HPAanalyze = derive2 { name="HPAanalyze"; version="1.0.0"; sha256="1z17384m893wyf7a9v31ghcmsfvly8llbzh98kjz91a6mlqj2aqf"; depends=[cowplot dplyr ggplot2 hpar magrittr readr reshape2 tibble tidyr XLConnect xml2]; }; - HTSFilter = derive2 { name="HTSFilter"; version="1.22.1"; sha256="18fb3xl39n4n6n98bw2lbfrncg1m226yyx6v8cmrcgz88k0wqjrc"; depends=[Biobase BiocParallel DESeq DESeq2 edgeR]; }; - HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.34.1"; sha256="1c9qajkfnhpn5a2lywn8bh467pwzzqx7gc4f2pns0jr911fq6fyb"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; }; - HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.12.0"; sha256="1rj81n21y6n4zlh0ck2i5zxani6hryb7xzf8azl03qk6q9yy09c5"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; - HTqPCR = derive2 { name="HTqPCR"; version="1.36.0"; sha256="15raybys2fks10a5w1084yy5sx7r4n61rran7xk7yp0cifg9k8ji"; depends=[affy Biobase gplots limma RColorBrewer]; }; - Harman = derive2 { name="Harman"; version="1.10.0"; sha256="0j116k1gkxxbg210y4knc0wdbqjmb2ql72pzsh9r07zcaw2y8fzj"; depends=[Rcpp]; }; - Harshlight = derive2 { name="Harshlight"; version="1.54.0"; sha256="133b98p7b9shxz4nf6qg9qs5bb8yqxdw83cljjblxh5nngpm0s5b"; depends=[affy altcdfenvs Biobase]; }; - Heatplus = derive2 { name="Heatplus"; version="2.28.0"; sha256="0drspjzgb23ra2kdvpxhsd8mdifsf97fcf668llyz2hr0r39fc48"; depends=[RColorBrewer]; }; - HelloRanges = derive2 { name="HelloRanges"; version="1.8.0"; sha256="1brx8bj4xxn63iwfv7ys1fzw7aa1ir8k6jhdq26rzpk973nl6cyy"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - HiCBricks = derive2 { name="HiCBricks"; version="1.0.0"; sha256="0w3qw22jln44qxx635miaa807q08w010gad7bnqwr0z0zpwrw769"; depends=[BiocFileCache curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges R6 rappdirs RColorBrewer reshape2 rhdf5 S4Vectors scales stringr viridis]; }; - HiCcompare = derive2 { name="HiCcompare"; version="1.4.0"; sha256="08sk4sgjnjchyl1p3dbgr0yjbxl5qg35k4l5gzs08xa9pypw9jjq"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq S4Vectors]; }; - HiTC = derive2 { name="HiTC"; version="1.26.0"; sha256="11f96k1707g6milpjgnrjf3b5r42hsrxhb5d8znkcr3y3mrskdbj"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; - HilbertCurve = derive2 { name="HilbertCurve"; version="1.12.0"; sha256="1yagxajf5paj45a35d1l9aqb5mxwrh06b5jcrw2gldgndmxss9a8"; depends=[circlize GenomicRanges HilbertVis IRanges png]; }; - HilbertVis = derive2 { name="HilbertVis"; version="1.40.0"; sha256="1b6cfzycskklhxp4fw8hyxgnxdrzx047n2igrqdhbh8pv59cdsfa"; depends=[lattice]; }; - HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.40.0"; sha256="1qjfbgzzhj54fvgbvzlk37n1p32bc2vbf2yqkbn5y5ml6hsnmccw"; depends=[HilbertVis]; }; - HybridMTest = derive2 { name="HybridMTest"; version="1.26.0"; sha256="1xjykw1j81bai77nhxhxyib5z118isfr755q700934zh8zmsra61"; depends=[Biobase fdrtool MASS survival]; }; - IHW = derive2 { name="IHW"; version="1.10.1"; sha256="10wqasl8k2j3y5qvak3xr2xj6symk656xww1y5n2l22nz832j19n"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; - IMAS = derive2 { name="IMAS"; version="1.6.1"; sha256="0dy56awxbjkqx3xlafdz9p8prh5qk5ivgh1cp1gp69aph99xyrkf"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; - IMMAN = derive2 { name="IMMAN"; version="1.2.0"; sha256="1z8bxi7szjqzp630yg1hh1jkswy4iqnly325f11bhkaj8d04df21"; depends=[BiocFileCache Biostrings igraph seqinr STRINGdb]; }; - IMPCdata = derive2 { name="IMPCdata"; version="1.18.0"; sha256="0qqdpi4g29kf3y2cj7y3db40myacl368alc72lrv1qbw3qncjyjd"; depends=[rjson]; }; - INDEED = derive2 { name="INDEED"; version="1.0.1"; sha256="0w5h7zjalvz595fgz5ds5y4vxmny00psg60rwhjdjsh3z5rh6hwm"; depends=[devtools glasso]; }; - INPower = derive2 { name="INPower"; version="1.18.0"; sha256="074fylal7rn880vidi10d78s4zcxakq8f4gcxlgpq2hg0ivhd8rk"; depends=[mvtnorm]; }; - INSPEcT = derive2 { name="INSPEcT"; version="1.12.2"; sha256="1ykkr15b4bc2carwppf9yxzpl2n6lqpc6z6i2qy37vc6xffzgdx4"; depends=[Biobase BiocGenerics BiocParallel DESeq2 deSolve GenomicAlignments GenomicFeatures GenomicRanges IRanges plgem preprocessCore pROC rootSolve Rsamtools S4Vectors shiny SummarizedExperiment TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - IONiseR = derive2 { name="IONiseR"; version="2.6.0"; sha256="01lqisdlsvym8nhgpzn7lpcddk9lv9253dy9v65r2dicb5xqhj00"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; }; - IPO = derive2 { name="IPO"; version="1.8.1"; sha256="0az0wvbnanaaviv4z91q4qa2zh7rjbmgybh4s78z9426cfk2yz7g"; depends=[BiocParallel CAMERA rsm xcms]; }; - IPPD = derive2 { name="IPPD"; version="1.30.0"; sha256="19g39k2cxfrbfh8hzmwk6hh67mp3na8447kd7jrdshd6zd2raaas"; depends=[bitops digest MASS Matrix XML]; }; - IRanges = derive2 { name="IRanges"; version="2.16.0"; sha256="0ljppsk611xi72gc8mbdx1311b63b1ijd401jz5xmxk5frla1nc1"; depends=[BiocGenerics S4Vectors]; }; - ISoLDE = derive2 { name="ISoLDE"; version="1.10.1"; sha256="1iv32al2z01dgaqfiawx03ga1b380qkhxwi82r9aav3ry42brpmg"; depends=[]; }; - ITALICS = derive2 { name="ITALICS"; version="2.42.0"; sha256="1k55pd3zz9zzwc04m1cjlv1ib3w78n8qzxdhzhpw0pwaw6bzfpmr"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; - IVAS = derive2 { name="IVAS"; version="2.2.1"; sha256="1spqlmlgrdcw1679g1j15rycwadnhwkwbaqag9wcn5prnn27xx88"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; }; - IWTomics = derive2 { name="IWTomics"; version="1.6.0"; sha256="0xn12qjac2kxpyvpm8ly58q41cqz0v3q6pl6cn7hb0lvxcplp86s"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; - Icens = derive2 { name="Icens"; version="1.54.0"; sha256="0l70vj53cnvgp5ls205ign47zhl12xbaxl5hdkjs73gbdvx2aagk"; depends=[survival]; }; - IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.26.0"; sha256="0s6s02awa5i86rcp12ijaqb8cga00kpwiap2nj6s2jdg3kh1ady6"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; }; - IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.30.0"; sha256="1knaavzdvm1iz6crhqhxsxhvlrpa9k6n6d82q21w6qag8lkvwc2x"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; }; - IdeoViz = derive2 { name="IdeoViz"; version="1.18.0"; sha256="067bd18pb3xyw58xxl0fxa09kcyh4dhdzxbci6i7b82fa17s9hkb"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; - Imetagene = derive2 { name="Imetagene"; version="1.12.0"; sha256="0lh15nqjxwgjlhhzrrjj9bpbbkxnq2nlgx3v4fik6q4d5rqx0zbb"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; - ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.10.5"; sha256="15j5f8vxl0j135kcc69g9xpkgdcipjhj0slgd52c818hgdbyj4zk"; depends=[Biobase curl data_table digest flowCore flowWorkspace ggplot2 gplots gtools heatmaply httr pheatmap plotly preprocessCore R6 reshape2 rjson Rlabkey rmarkdown scales]; }; - ImpulseDE = derive2 { name="ImpulseDE"; version="1.8.0"; sha256="0jiqclcm0w6nh7j3w5wqv0c6lw0pyn4wczld2fmkqyv71mshmakn"; depends=[amap boot]; }; - ImpulseDE2 = derive2 { name="ImpulseDE2"; version="1.6.1"; sha256="0zbrkwaspwaq9aa9il4ahn5lnhbyz8cair5lx354pr1whm3wn8v3"; depends=[Biobase BiocParallel circlize ComplexHeatmap cowplot DESeq2 ggplot2 knitr Matrix S4Vectors SummarizedExperiment]; }; - InPAS = derive2 { name="InPAS"; version="1.14.2"; sha256="1z0lk2a5wfaykq4r7rmfrc4d4kcg4icygxri4y96i467a3v48m2i"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; - InTAD = derive2 { name="InTAD"; version="1.2.3"; sha256="1vahq4rh8icka1qqwnqvw3y5hbrss0nnpyll5bvwnm9514sp030w"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; }; - IntEREst = derive2 { name="IntEREst"; version="1.6.2"; sha256="1y9ilxlqi71hy0jzar5bbdn9y9xx7nbfzi6rgkdmf8mpdin5r62f"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; - InterMineR = derive2 { name="InterMineR"; version="1.4.1"; sha256="1v11h22nw3chxkscdmbc9z4186x885lpnh537yyijp9429bab44l"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; - InteractionSet = derive2 { name="InteractionSet"; version="1.10.0"; sha256="0wirfhmpmkmnmhbqslw4bzvi2msqyqpjy1rrwr5qbd9k5rhx3bzb"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; - IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.4.0"; sha256="0cv7g8cca447gvzy13xpx7h5sxg2w9n3pmj74rfqpbcpd1m9h2p4"; depends=[FGNet igraph knitr]; }; - IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="1.0.5"; sha256="0qvcck4ky4mlib49xfmmkhmv4ndxnbfn8bssim8m5c7xl5zqxj7a"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; }; - IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.18.0"; sha256="0k7l3h56m4l7l9d7c1vg06dg6a986n4v7v0w6yrmpspajkx302ar"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; - IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.4.0"; sha256="1fbrbshan00r8qidz1yran84hj4higf1g4iw1qx58h13laqs1yi0"; depends=[Biostrings BSgenome DBI DEXSeq dplyr DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr plyr RColorBrewer readr reshape2 rtracklayer stringr tximport VennDiagram]; }; - JunctionSeq = derive2 { name="JunctionSeq"; version="1.12.1"; sha256="1azc7sb3yga6v98x4g97g9pj90yk9kzj6m8s4zfaz3ggsrz62m6w"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix Rcpp RcppArmadillo S4Vectors statmod stringr SummarizedExperiment]; }; - KCsmart = derive2 { name="KCsmart"; version="2.40.0"; sha256="1jhw1w964hvjxcxxzyx03mm5w98a15x4hak9r1bbhi1q38x0vs6p"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; - KEGGREST = derive2 { name="KEGGREST"; version="1.22.0"; sha256="0blpd5a7whd2sswfhqd17h58hg06ymaf80gapdr9ja43hnnlj309"; depends=[Biostrings httr png]; }; - KEGGgraph = derive2 { name="KEGGgraph"; version="1.42.0"; sha256="0ry0pfqc61r0cz98j6zlyhh4qh6568l0w0j61xmysayyp046mgy3"; depends=[graph XML]; }; - KEGGlincs = derive2 { name="KEGGlincs"; version="1.8.0"; sha256="188c5cq2yrcwd991cicgh9ivh5xingdd6d46hahvwmvz3y9qyi7a"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; }; - KEGGprofile = derive2 { name="KEGGprofile"; version="1.24.0"; sha256="140f834dlwry5h6kl3z2zm8ch31syl72l4jkmri4vwy5cyvin5bg"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png RCurl TeachingDemos XML]; }; - KinSwingR = derive2 { name="KinSwingR"; version="1.0.3"; sha256="156ins4fqr4kdc5pnikl71pn2ppqknfxf1dcl3ffk82sby1xclkd"; depends=[BiocParallel data_table sqldf]; }; - LBE = derive2 { name="LBE"; version="1.50.0"; sha256="1padaxr7hdqrbwgkma4r64ndxhig7ygl7dvbixziz4qdl7cwi869"; depends=[]; }; - LEA = derive2 { name="LEA"; version="2.4.0"; sha256="1bbcsk6k2w8bbjksbnvd7zi4m1zldmjj5pwspjcciqssk10abwn9"; depends=[]; }; - LINC = derive2 { name="LINC"; version="1.10.0"; sha256="1lbpqdhiyh52m3jrsqlwshaz0ncflx5gpyp7lknw4z1vgyvi4ad5"; depends=[ape Biobase clusterProfiler DOSE ggplot2 ggtree gridExtra org_Hs_eg_db png Rcpp ReactomePA reshape2 sva]; }; - LMGene = derive2 { name="LMGene"; version="2.38.0"; sha256="0ynyknm86lvcimva5krmy3xwi2ni7js6jrvkkjsy7w3q90cr2q6q"; depends=[affy Biobase multtest survival]; }; - LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.8.1"; sha256="0q416vx4frw1dm29yfg06laxkp8ns4mk17p1fw2ir96l44awam7y"; depends=[CAMERA xcms]; }; - LOLA = derive2 { name="LOLA"; version="1.12.0"; sha256="1ysdxkaarwwzw06c9d5xh617g284wk57wpj9lbkfv8rrxkla33d0"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; - LPE = derive2 { name="LPE"; version="1.56.0"; sha256="0ryvbkjx9x394a9za4wyy6rk9avjpwqsgdz6rywp9rr4di551a4h"; depends=[]; }; - LPEadj = derive2 { name="LPEadj"; version="1.42.0"; sha256="11pvvh42idpi7636wrm52whaavl4wnbwki1p82p196m0rvac1jy5"; depends=[LPE]; }; - LRBaseDbi = derive2 { name="LRBaseDbi"; version="1.0.0"; sha256="0idf0gn593b6k0fnpkaphh59cpr6a8582namxrvik1b6zpi5kfzl"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; - LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.32.0"; sha256="14880gimbgw7lmvdq965nm3jgkss1qfakl8xnf66kx4f8mczrvps"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; }; - LedPred = derive2 { name="LedPred"; version="1.16.0"; sha256="1nimsxm841fnqn0v0x0laq5dcwrp46k9vxaxwd86ayn9sdlgx6fj"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; - LineagePulse = derive2 { name="LineagePulse"; version="1.2.1"; sha256="1632g54pyip4dvsq6m08qhfl4xgcfphcw5rix7mr9nf8qh1hrbns"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; }; - Linnorm = derive2 { name="Linnorm"; version="2.6.1"; sha256="1qgk8m5kc409flqxs3vnf228v3z0112q8py9hgfgyiwvi6yzdbp6"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; }; - LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.36.0"; sha256="0hz60m9m0098mqwajw83xkraajlbh4q8617d85mfjcbdgmc483a1"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; - Logolas = derive2 { name="Logolas"; version="1.6.0"; sha256="0asi528yb65vwdkxxlsdv9g06fr2y5mzxa3m1669byjb6fjzzs1y"; depends=[Biostrings ggplot2 gridBase LaplacesDemon SQUAREM]; }; - LoomExperiment = derive2 { name="LoomExperiment"; version="1.0.4"; sha256="18pqixrnln5d60g6a5nay2zw4984bnllqzrpylwx2nrxsindp9n1"; depends=[DelayedArray GenomicRanges HDF5Array rhdf5 rtracklayer S4Vectors SingleCellExperiment SummarizedExperiment]; }; - LowMACA = derive2 { name="LowMACA"; version="1.12.1"; sha256="08lh0q88ixad11hgkxs0y1bc7pi3a8f1a70nqxmdwkgghcfziirp"; depends=[BiocParallel Biostrings cgdsr data_table httr LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; - LymphoSeq = derive2 { name="LymphoSeq"; version="1.10.0"; sha256="024d13hrw0s0zmza9bd8nm9s79imwajqvzxiaxj5348pj2d212hr"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; - M3C = derive2 { name="M3C"; version="1.4.1"; sha256="0l9063bn0sfcq5qxghaj8f98x0pg91fwsd8l64ga8d7pnlm8i5fm"; depends=[cluster dendextend doParallel doSNOW foreach ggplot2 Matrix matrixcalc NMF RColorBrewer Rtsne sigclust survival]; }; - M3D = derive2 { name="M3D"; version="1.16.0"; sha256="0a7xs3kqvyxswsa4zcdakij4rvpv1pr4fmplnvxyskhh2zps7xyl"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; }; - M3Drop = derive2 { name="M3Drop"; version="1.8.1"; sha256="0bzxv4lnmbz4d7y1c2w7i013rfjscnj1ndb05k9n1i4c9gsknqya"; depends=[bbmle gplots numDeriv RColorBrewer statmod]; }; - MACPET = derive2 { name="MACPET"; version="1.2.0"; sha256="0799d3pr5b6g7xbi75pf693768nspdc73qay72naghyql6g91s96"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; - MADSEQ = derive2 { name="MADSEQ"; version="1.8.0"; sha256="1b7d6niz8lhvd17xjl4hy1yyki049cg6wd3g8wp38bm3zs6dzfd1"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; - MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.2.3"; sha256="1d2lllsz2jdqma1ifdg7xj9fby85az7bifn0h0hj705m6dyla42z"; depends=[biomaRt bladderbatch clusterProfiler data_table DOSE ggExtra ggplot2 ggrepel ggsci gridExtra pathview pheatmap png sva]; }; - MAIT = derive2 { name="MAIT"; version="1.16.1"; sha256="0fg3cah81c4gzm3hw590h4grrja2qgfs8mrpkbifrgsclbybnp95"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; - MANOR = derive2 { name="MANOR"; version="1.54.0"; sha256="102s71adp93n47sz2hcqs5ihykwcvha6sz7v24p409a7rj8ary38"; depends=[GLAD]; }; - MAST = derive2 { name="MAST"; version="1.8.2"; sha256="0rhx655dza0m6yg9jcfz2nmxqahvxx2l91kqgyp7qai0bzz9d9ix"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr progress reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; - MBASED = derive2 { name="MBASED"; version="1.16.0"; sha256="0046yjpjdczxjqkpvsdsj8fnah1kmz4m038k49laqlrricyl6f2f"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; - MBAmethyl = derive2 { name="MBAmethyl"; version="1.16.0"; sha256="05jwqlvmjhcfqjqxv6m5mmc72q8lfv2qqwm0f8j1dddpvvyh8fzd"; depends=[]; }; - MBCB = derive2 { name="MBCB"; version="1.36.0"; sha256="0yizhggn77arg1pnl3qd25xc5awwv1f1hi3mk6p2c5pdk48mz679"; depends=[preprocessCore tcltk2]; }; - MBttest = derive2 { name="MBttest"; version="1.10.0"; sha256="05cwwqj8qjj66ndy2hdx2jxna07xjqg7qv4z1gar6r91p482zsp0"; depends=[gplots gtools]; }; - MCRestimate = derive2 { name="MCRestimate"; version="2.38.0"; sha256="1hl5bqibajwscir94dla23544sg866hqx1h793fj7m38xcjhxlzn"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; }; - MCbiclust = derive2 { name="MCbiclust"; version="1.6.1"; sha256="1zjhviz3n0w72kwd0czkxddm23jj8876174lbjc85fd8piqf7x6f"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; - MDTS = derive2 { name="MDTS"; version="1.2.0"; sha256="1h0vpbi62j0g1cdp06xkp0y4aymnqqhp7frhwi6f7hsiviaz2c0p"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; }; - MEAL = derive2 { name="MEAL"; version="1.12.0"; sha256="05cfyq3fffxj802cyh3bghfn2gg6z0yhy2spii9n8pxmsfcsr7pn"; depends=[Biobase BiocGenerics DMRcate GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; }; - MEDIPS = derive2 { name="MEDIPS"; version="1.34.0"; sha256="1bb8k0jzxfji79qxb4v6pdp9jyf6hv83g5mmqj74k3x2cglycwia"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; - MEDME = derive2 { name="MEDME"; version="1.42.0"; sha256="0yg04lghqc3sfyakf8id3dc5gd0bfhaf9lp903g5jpiai5779byy"; depends=[Biostrings drc MASS]; }; - MEIGOR = derive2 { name="MEIGOR"; version="1.16.0"; sha256="1jxl2bcsbrlab6ss66388l64k5xcjr5g3gpgya2rk4yq237mghl6"; depends=[CNORode deSolve Rsolnp snowfall]; }; - MGFM = derive2 { name="MGFM"; version="1.16.0"; sha256="08ngcr1a979amjdl8x5a7mn1zdvrpa4h35rkhimi9kr0fn68kj34"; depends=[annotate AnnotationDbi]; }; - MGFR = derive2 { name="MGFR"; version="1.8.1"; sha256="1v85b82algx79kbk25inan96kymnpchplbl5r15vyxavvkqzd66a"; depends=[annotate biomaRt]; }; - MIGSA = derive2 { name="MIGSA"; version="1.6.0"; sha256="19gfb98qmb8wbi343lw92sf7d29xliyzb3wz095pd2npsjr69qkl"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz RJSONIO vegan]; }; - MIMOSA = derive2 { name="MIMOSA"; version="1.20.1"; sha256="0vj7z95pjq62glg1akipydbybxsxc69yjpqrffpc33kqhf46nhfb"; depends=[Biobase coda data_table Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; - MIRA = derive2 { name="MIRA"; version="1.4.1"; sha256="0wy4iisp6c0kfns34pr5am055b1x7wdnbdh8lgr5ll91wxz48sg9"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; - MLInterfaces = derive2 { name="MLInterfaces"; version="1.62.1"; sha256="1h0x1p2h8x1h276wxx6kcnb4c4s5sglnmd58iigl81a224x8gxwp"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rpart sfsmisc shiny threejs]; }; - MLP = derive2 { name="MLP"; version="1.30.0"; sha256="03h7k5v620x2hw6k3gddaba40fwh6zvpmlnhf6mcml7ldsni95y9"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; - MLSeq = derive2 { name="MLSeq"; version="2.0.1"; sha256="1jaw2blnl7jsd2px069af7zqk69d04bma8m5vpqb941vx6yhk095"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma plyr sSeq SummarizedExperiment xtable]; }; - MMDiff2 = derive2 { name="MMDiff2"; version="1.10.0"; sha256="0ljdr6y3plzpf9j70ghw41x3jpb8p52lqb9987gm1mw7lxw9iraf"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; - MODA = derive2 { name="MODA"; version="1.8.0"; sha256="0jarqlyfx81pamdl5z1kx96ri6kjq59lv144ifw8ga6kzs5bng58"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; }; - MPFE = derive2 { name="MPFE"; version="1.18.0"; sha256="02lnymmsl1k770jh41sak6dxkzsb0c38934aslbd890dibc2c04i"; depends=[]; }; - MPRAnalyze = derive2 { name="MPRAnalyze"; version="1.0.1"; sha256="0nwd28jcr8dkhi3v71l9dd83dfl4k51sjdnjmml9vbdcznps1ffg"; depends=[BiocParallel progress SummarizedExperiment]; }; - MSGFgui = derive2 { name="MSGFgui"; version="1.16.1"; sha256="0qy7k9l88qna24kmrc2ikg326dk1jwcrl3908p74lh42sr5wxlzj"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; - MSGFplus = derive2 { name="MSGFplus"; version="1.16.1"; sha256="0qbyb4wycf6qbkx83rh1n8hc664mw542x6jw658aqhdnfl3gsvxq"; depends=[mzID ProtGenerics]; }; - MSnID = derive2 { name="MSnID"; version="1.16.1"; sha256="077n6ljcnnl7q4w0qj8v46vm4sjk9vzzfqf7wsc6lz0wmyzqdng3"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; }; - MSnbase = derive2 { name="MSnbase"; version="2.8.3"; sha256="1kl1d7byphnfpmbl5fzbgs68dxskhpsdyx7ka51bpfn0nv3pp492"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors scales vsn XML]; }; - MSstats = derive2 { name="MSstats"; version="3.14.1"; sha256="1bgvdq1mfq6rxjf5ag2slrhy4056906wghsirrymf53nw3qz5g6s"; depends=[data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm preprocessCore randomForest reshape2 snow stringr survival tidyr]; }; - MSstatsQC = derive2 { name="MSstatsQC"; version="2.0.1"; sha256="1f6gv1fqm5h6xs91wc1bamyri47qggb872qzriwzvff7ydn0q1ag"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics RecordLinkage]; }; - MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.2.1"; sha256="1k7dhiayf885ax1mg03yg1w4mamk3j1gsm7phszxl3i0j3c2gks7"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly RecordLinkage shiny]; }; - MSstatsTMT = derive2 { name="MSstatsTMT"; version="1.1.2"; sha256="0aaw3qillcfrjczdmd7s21v551hclnq8fn2zvn91wyr4i82q43rr"; depends=[data_table dplyr ggplot2 limma lme4 matrixStats MSstats nlme reshape2 tidyr]; }; - MTseeker = derive2 { name="MTseeker"; version="1.0.6"; sha256="0fsb7k6pkl15q8csygpsjrz4jvy20mfd5rfmhl7q7ffj4d7sprxh"; depends=[Biobase BiocGenerics Biostrings circlize GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR Homo_sapiens IRanges jsonlite Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VariantTools viridis xml2]; }; - MVCClass = derive2 { name="MVCClass"; version="1.56.0"; sha256="1hw36gd1z19dir6fl7j3dzqzi5p1668zbwpcz7l21hbyycv27l0j"; depends=[]; }; - MWASTools = derive2 { name="MWASTools"; version="1.6.0"; sha256="0bkl7vgyac6xhjj636vlmynq75zyp6smvjvzg1ymkgg800wylg4c"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; - MantelCorr = derive2 { name="MantelCorr"; version="1.52.0"; sha256="1z0f6g5zbxl1sqcl6rdx7y6vh637i6209ya9fsan6wi5r8rcsamn"; depends=[]; }; - MassArray = derive2 { name="MassArray"; version="1.34.1"; sha256="0hdydbpg7arsxl0v7zz7w6zrczb44ff2dap4vgwqxdk5jgh1mm4b"; depends=[]; }; - MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.48.1"; sha256="1xcr568a36b570rldy27wq4a2jn7yf5f6fddlzgx6x944jdn3ckz"; depends=[waveslim]; }; - MatrixRider = derive2 { name="MatrixRider"; version="1.14.0"; sha256="17n3s0gdj3jjlf4pangnbdb00ak62j5wvdqd8yhackhs4z9zbchb"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; - MaxContrastProjection = derive2 { name="MaxContrastProjection"; version="1.6.1"; sha256="103aqb89g5ca9vp0j3763dypwjqnzvf1dh8s6v03nrisfslwa85s"; depends=[EBImage]; }; - MeSHDbi = derive2 { name="MeSHDbi"; version="1.18.0"; sha256="1if3jrrxlrsrza7404d7banrdfbz5g1v69wydxglldzfim3g9jw3"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; - MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.54.0"; sha256="0s39wlfcqag15y73dapmnz0zrywsnd9flz1n7yl20r9p8dfmhv12"; depends=[]; }; - MergeMaid = derive2 { name="MergeMaid"; version="2.54.0"; sha256="07cgcfvppdvyrb0hhi24126ysdcal8vjyplqxfkqxxyjpv0p8ap8"; depends=[Biobase MASS survival]; }; - Mergeomics = derive2 { name="Mergeomics"; version="1.10.0"; sha256="16xv75q790r0apdb1yb10j6mcjs67a891av1kjf21xyp5g5bgpja"; depends=[]; }; - MetCirc = derive2 { name="MetCirc"; version="1.12.1"; sha256="07y7r4y01v26mxgfivxrhq9r80w228lxicsbxvsbb2xbb8vvjz7j"; depends=[amap circlize scales shiny]; }; - MetID = derive2 { name="MetID"; version="1.0.0"; sha256="12nrbdq4xracd6p7xz3l0dvqp4xlj34jr7wj90wmk09i89h7sfjj"; depends=[ChemmineR devtools igraph Matrix stringr]; }; - MetNet = derive2 { name="MetNet"; version="1.0.1"; sha256="0s45l7y43bhc1sha4wmhch9vfyw7xza95lyyl5ixfz28z99k08vr"; depends=[BiocParallel bnlearn mpmi parmigene ppcor rfPermute sna stabs WGCNA]; }; - MetaCyto = derive2 { name="MetaCyto"; version="1.4.1"; sha256="1yi04zy7kmikac22msynnnm3wqhy9d59qz2v8m54w8h3rn49c1c0"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; - MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.2.1"; sha256="007y4dz3mfww6vwmm5d99flgzw372hjkbbv36n8hz1gqrwy52yvp"; depends=[beanplot gplots RColorBrewer SummarizedExperiment]; }; - Metab = derive2 { name="Metab"; version="1.16.1"; sha256="0m7wd4rw0q7y53gpzi0bgn0gwf83kbdx1pjvfblnirkgwyq69f6c"; depends=[pander svDialogs xcms]; }; - MetaboSignal = derive2 { name="MetaboSignal"; version="1.12.0"; sha256="1wgpcn25cpql6dwgwpxw16w8hizny92xfbgs4rjz4dpssg9n1qq3"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; }; - MethPed = derive2 { name="MethPed"; version="1.10.1"; sha256="1vcy4x7p2bhpyfpj5lxwjzfm09lc3c0rkzam83837b7apz3j9sqn"; depends=[Biobase randomForest]; }; - MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.14.0"; sha256="0by77378lml6ncz53c7xkh29dayach31p3fn0jrf31x947larnzy"; depends=[Biostrings gplots seqinr stringr]; }; - MethylAid = derive2 { name="MethylAid"; version="1.16.0"; sha256="03qf2j12nq6nqfs96lsdk7jny2ak6258j5bq0brp7wmpijlnjrak"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; }; - MethylMix = derive2 { name="MethylMix"; version="2.12.0"; sha256="062jr6qskp3psmpirqn5aiq5mhw3k1ipyb0m16ds2i95n8v3ky5p"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; - MethylSeekR = derive2 { name="MethylSeekR"; version="1.22.0"; sha256="1nqwza5bqkn0k664j1a2p518a3pj27zwlc5pkvjbh09cjvfibyf0"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; - Mfuzz = derive2 { name="Mfuzz"; version="2.42.0"; sha256="105xk52hxc2d5yy0fy4cb0zhrpnansvyb0dzx9jc1dfjvxzq4vjg"; depends=[Biobase e1071 tkWidgets]; }; - MiChip = derive2 { name="MiChip"; version="1.36.0"; sha256="10v9vvyr4bs7l0x6cb6frhni8sa16sdllykjsbnjxd3jynvzrpy9"; depends=[Biobase]; }; - MiPP = derive2 { name="MiPP"; version="1.54.0"; sha256="08g19yw9hbrwsm630rz907dqlfs7qg2xvaby9bx3mjiwlr7d15wx"; depends=[Biobase e1071 MASS]; }; - MiRaGE = derive2 { name="MiRaGE"; version="1.24.1"; sha256="1jak07j4kfnyjhcdik4a4ihbb87sqx7mh3yajjbrm13zpvh9vyf3"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; }; - MineICA = derive2 { name="MineICA"; version="1.22.0"; sha256="1n10x9y5x1h06k1kv2jv3ym5n950dhcd20g34rarx0zyihd2ln4j"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; - MinimumDistance = derive2 { name="MinimumDistance"; version="1.26.0"; sha256="0rv7pgzbrscc8raa49x1nbvbp3ivr8kwdr8rf6hvfw8y1xk3rnba"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; - Mirsynergy = derive2 { name="Mirsynergy"; version="1.18.0"; sha256="19nw7yapcxvidzzdbhjzplajfmss65drqq5xrsz1ycr87jgh8h5b"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; - MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.32.0"; sha256="045089yfj5aakabxhpjld9fa62sfr48xqb88j8m3xm7561ml20ql"; depends=[Biobase lattice limma statmod vsn xtable]; }; - MoPS = derive2 { name="MoPS"; version="1.16.0"; sha256="0wypkl5kdjmwf78pwbgdsin8fxiycfwkf3kwrbqxc7r27lplgwyj"; depends=[Biobase]; }; - MoonlightR = derive2 { name="MoonlightR"; version="1.8.0"; sha256="16jhqygppfy82h3jnldigf1mgirbh6wcrqd61nn335kgj1d016p0"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; - MotIV = derive2 { name="MotIV"; version="1.38.0"; sha256="1qrpydwc5bn8f0843qkyhw6920xk8kvq452ird0ij96g6faiv9a8"; depends=[BiocGenerics Biostrings IRanges lattice rGADEM S4Vectors]; }; - MotifDb = derive2 { name="MotifDb"; version="1.24.1"; sha256="1q454k3p4ib2z79rcgwyx9s9s7gg5j0vlhca1b579qzi3692m8xi"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors splitstackshape]; }; - Mulcom = derive2 { name="Mulcom"; version="1.32.0"; sha256="0k3illh3dchd5nwa4y87v1n0lkil7p5yiqzg9v65nxv35mhkg0vv"; depends=[Biobase fields]; }; - MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.8.3"; sha256="04q1y3gkmf6s6ksd3jvxr0r13gzacrxcdgr1zd3ign0zq2ab5bli"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; }; - MultiDataSet = derive2 { name="MultiDataSet"; version="1.10.0"; sha256="1sr93zdirjqgsffmkv9plaqbg3rfsz8lh96mqv7xrnc3nmhmm65y"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; - MultiMed = derive2 { name="MultiMed"; version="2.4.0"; sha256="1dfcqh7px0zzgrg96r3930jxzcgvc91xlfm4q9fnn3w85nzgdnrb"; depends=[]; }; - MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.8.0"; sha256="0w9lg1zs106h6rqvy8mhikq6q6q9syw6c1prcxr38ssh85rcih12"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; }; - NADfinder = derive2 { name="NADfinder"; version="1.6.1"; sha256="0kz7dz95kdz5dz05bh7x6czrwdr1imaq1mv6bncxxhv1mffhmb9v"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; - NBSplice = derive2 { name="NBSplice"; version="1.0.6"; sha256="1nalcpj7n4qghmkrfq65xd4i0aack2yq4l2wwsy4z0sfi7gh6m49"; depends=[BiocParallel car edgeR ggplot2 MASS mppa reshape2]; }; - NCIgraph = derive2 { name="NCIgraph"; version="1.30.0"; sha256="16mxxrq6g4szig29cah2a13qp1ybsh8ci37izlq6gpxn0h00maym"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; - NGScopy = derive2 { name="NGScopy"; version="1.16.1"; sha256="1zfasfbzzay402igag1ynffz2v9ad70wdy5vs02q0api3rkkn406"; depends=[changepoint Xmisc]; }; - NOISeq = derive2 { name="NOISeq"; version="2.26.1"; sha256="1wyhhi9ydlbjlz427093mdp5ppby77n37w5c2iyxlpsdk2m2nqsn"; depends=[Biobase Matrix]; }; - NTW = derive2 { name="NTW"; version="1.32.0"; sha256="10ndg6mina5wz3w87wpv4mnbxdyj6rhvc9jqf954wmh6gj04vyin"; depends=[mvtnorm]; }; - NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.12.0"; sha256="1927ry931ckjrci6yfk3fh774bizh4yb5f7p7x1ra1yxzfizq7k3"; depends=[Biobase matrixStats Rcpp]; }; - NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.14.0"; sha256="1kisr7j27iwyxjxsylnlrqz9ac5kbwr4indg0qkc3ycdlqqxbqvl"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; - NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.26.0"; sha256="06lppn4pbp0f3yb3lbpqmk7fqw6i754h9c8v1akvhg22wgb8428x"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; }; - NeighborNet = derive2 { name="NeighborNet"; version="1.0.0"; sha256="16fmsh71sx65g505mwbhkv9sf1y7niy24zpygxv3aqklqqrnk97r"; depends=[graph]; }; - NetPathMiner = derive2 { name="NetPathMiner"; version="1.18.0"; sha256="1pyqplxzmdd3sjwlr3dzhb39gfhkbd5a550inrvxh4gqnw9r2lpl"; depends=[igraph]; }; - NetSAM = derive2 { name="NetSAM"; version="1.22.0"; sha256="10wmq1vgzdsp6iyia7gqh1d685cj1nikgvygpl69hgciabn3kzz5"; depends=[graph igraph seriation]; }; - NormalyzerDE = derive2 { name="NormalyzerDE"; version="1.0.0"; sha256="1ql62i9mgnr3vafz0yfi8zxxlkccjlrjkb4lnrxv0sshhs5kw4di"; depends=[ape Biobase car ggplot2 limma MASS matrixStats preprocessCore raster RcmdrMisc SummarizedExperiment vsn]; }; - NormqPCR = derive2 { name="NormqPCR"; version="1.28.0"; sha256="1b4j0ngqlkpc1fhfnkmk6h917has6ldi1876rsincl28yfvghz25"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; - NuPoP = derive2 { name="NuPoP"; version="1.32.0"; sha256="0p1v7v5shvcbiwgi6fy1fkh55ikks6svh17f2h7biw5j29zwg878"; depends=[]; }; - OCplus = derive2 { name="OCplus"; version="1.56.0"; sha256="0brkcx3vapi7gnw8v6023j56pi6mgki26hx71fq4ldwchwrg4pxr"; depends=[akima multtest]; }; - OGSA = derive2 { name="OGSA"; version="1.12.0"; sha256="0qcnc6658ggv4is9a0s9lid41ns9845qbwd5m0l8r9qjzgmix2s7"; depends=[Biobase gplots limma]; }; - OLIN = derive2 { name="OLIN"; version="1.60.0"; sha256="0vmmxx74i3ch00xsaw60b82h7nbh8rgv6xzbzmcnpa79anaamv3l"; depends=[limma locfit marray]; }; - OLINgui = derive2 { name="OLINgui"; version="1.56.0"; sha256="03n5xlh6fhcw7mvsdaihxn0b39zyhf3f2fayql40nkcinfmbmr50"; depends=[marray OLIN tkWidgets widgetTools]; }; - OMICsPCA = derive2 { name="OMICsPCA"; version="1.0.1"; sha256="17sm8vk96z25q1mdybq6al82yrbb28sjrr40lpwc1syzjabhns2b"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; }; - OPWeight = derive2 { name="OPWeight"; version="1.4.1"; sha256="00xwam4vpa7jpdqz8jy66kckl92sawd2m60qwlp96l8dpm5f7kxv"; depends=[MASS qvalue tibble]; }; - ORFik = derive2 { name="ORFik"; version="1.2.1"; sha256="0x8pj6j3g8gq3i6fqgnd85s60kadq4shjr4hykf00f9zzkj3gnv9"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rcpp Rsamtools rtracklayer S4Vectors]; }; - OSAT = derive2 { name="OSAT"; version="1.30.0"; sha256="12cswkscavbkx8cxj0kzk6gz1h8xwp24mwy53dgyr771sch76k7j"; depends=[]; }; - OTUbase = derive2 { name="OTUbase"; version="1.32.0"; sha256="0xhwa9yd0qd86j03190riff5z64h93pn7q0b6qb2awwf5zrda8fs"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; - OUTRIDER = derive2 { name="OUTRIDER"; version="1.0.4"; sha256="0wivnc4dd8zlz7305jjps3iid5sjcy3z1q6sb5yj56i81hz5734j"; depends=[BBmisc Biobase BiocGenerics BiocParallel data_table DESeq2 GenomicFeatures GenomicRanges ggplot2 ggpubr gplots IRanges matrixStats pcaMethods plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo reticulate S4Vectors scales SummarizedExperiment]; }; - OmaDB = derive2 { name="OmaDB"; version="1.2.2"; sha256="16qy6p36mkw4fkyp9yis56zyn88x780767ahnqhnyzqlm9g5kv5w"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; }; - OmicCircos = derive2 { name="OmicCircos"; version="1.20.0"; sha256="1akb3djkq0waq1f81zi3nnv8svqf2i8w9agaac732vbdr4cf821d"; depends=[GenomicRanges]; }; - OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.14.0"; sha256="00a8wwk0z73ipdhjlwkwz4nqpjpyylafds88g8dhz0imk8f24gnj"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; - Onassis = derive2 { name="Onassis"; version="1.4.5"; sha256="17s3d2wb6mnckpxaq4ppll6fwc6fag4mg9921bf3islkb7vrbxfz"; depends=[AnnotationDbi data_table DT GEOmetadb knitr OnassisJavaLibs RCurl rJava RSQLite]; }; - OncoScore = derive2 { name="OncoScore"; version="1.10.0"; sha256="1q5xirwr184fn3fbkldp5v4cwmkkpggp2xnnh3s3prl4masdf6pk"; depends=[biomaRt]; }; - OncoSimulR = derive2 { name="OncoSimulR"; version="2.12.0"; sha256="0pbq9qbxx35zzpzsc3b18qhcdwskkg5xk6pf4kgbzisa8jkjyxfd"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph nem RColorBrewer Rcpp Rgraphviz smatr]; }; - OrderedList = derive2 { name="OrderedList"; version="1.54.0"; sha256="1hvw6lc39gq867gvz426qyj79yz85k2shwlw4mnk6xaib652gqwf"; depends=[Biobase twilight]; }; - Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.10.0"; sha256="1s2rqzdmzmbif92466x2mgmbjism68c62590pj8swx853f9x668s"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges RSQLite S4Vectors]; }; - OrganismDbi = derive2 { name="OrganismDbi"; version="1.24.0"; sha256="11pyv56cy4iy095h40k6k0mpjdlh6gsb4ld3s57nfa9nd4ypx3yi"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; - Oscope = derive2 { name="Oscope"; version="1.12.1"; sha256="0dxdif1zw8vw6p8ci1nlgr6pwh6gf27r6c9q1lng79gi6x2ipv75"; depends=[BiocParallel cluster EBSeq testthat]; }; - OutlierD = derive2 { name="OutlierD"; version="1.46.0"; sha256="1xbkasaf47qmfqqrm1k3mgnjj63rv30094r0f968q7rxfpdmq90f"; depends=[Biobase quantreg]; }; - PAA = derive2 { name="PAA"; version="1.16.0"; sha256="03hd7vvkqfr369wp8r0i9y29li9q91s76wzvbh9scvqd0ngmh9cv"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; - PADOG = derive2 { name="PADOG"; version="1.24.0"; sha256="0xia09m11j70n2gfmka620pk66vjvzr1376y2lb0g18k5n6k2zxv"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; }; - PANR = derive2 { name="PANR"; version="1.28.1"; sha256="00ymf82kdgc4pqnmz9hgi9b4pk8cidg8n6icx40rcs5dmlkhl24d"; depends=[igraph MASS pvclust RedeR]; }; - PAPi = derive2 { name="PAPi"; version="1.22.1"; sha256="12hv5cf0mc243w7a95hlbgfvll7qs6wcc3vqkpg7k5giy24n8i1q"; depends=[KEGGREST svDialogs]; }; - PCAN = derive2 { name="PCAN"; version="1.10.0"; sha256="08im6jwzbnnb4z01ayiv1jk8yqna8ncg6z65bfh0ba4jjvjwywfi"; depends=[BiocParallel]; }; - PCpheno = derive2 { name="PCpheno"; version="1.44.0"; sha256="1svdqnfp7ggi29rm5la35p96vmr7nzcfy5a458f1ra0kd4a6nd5l"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; - PECA = derive2 { name="PECA"; version="1.18.0"; sha256="10hhwvlr5gzcal0g62zimr79a3v2cpp95cb7nafnlq8v3ndg69hd"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; - PGA = derive2 { name="PGA"; version="1.12.1"; sha256="0ss057198960hig0kdc9hgn850830cmjx48n3lbq4nk2y887grcf"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer S4Vectors stringr VariantAnnotation]; }; - PGSEA = derive2 { name="PGSEA"; version="1.56.0"; sha256="0nmgjfw32flc42qj0vih8r4nsc01qv01cnqrr2nxv30zdwbnfk7w"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; }; - PICS = derive2 { name="PICS"; version="2.26.0"; sha256="10djnd38jdbyk18yqsypkpxqwnfiy8441zpmx1bhzzn8p5q2jpsv"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; - PING = derive2 { name="PING"; version="2.26.0"; sha256="16iygwjsk8n40jp4giik0d4ypd8i4dmd8xdl7dhh81jmjpmycd92"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; - PLPE = derive2 { name="PLPE"; version="1.42.0"; sha256="1i5a9nzravs4qzlxz4byvrcg0jnhcfd56ir4bm33056l4ymbia9r"; depends=[Biobase LPE MASS]; }; - POST = derive2 { name="POST"; version="1.6.0"; sha256="1grwyy2lisix5iv7brw85vii04yyhqhfkp8srirb0wh6i4q07wwf"; depends=[Biobase CompQuadForm GSEABase Matrix survival]; }; - PPInfer = derive2 { name="PPInfer"; version="1.8.1"; sha256="1ifp7gxvdlvn7wh6aizjfkaj53bcg4hbq2m54ksk2a7n86fympr5"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; }; - PREDA = derive2 { name="PREDA"; version="1.28.0"; sha256="1bm08y242hikgxh8icld6mvnydq2hg4wh6m3km5j3hw3hzv5qmv5"; depends=[annotate Biobase lokern multtest]; }; - PROMISE = derive2 { name="PROMISE"; version="1.34.0"; sha256="0g4qkk7yc7b4idhy78xnwplfwg5ng7y9qwhap90hhw7nnxdvvb3i"; depends=[Biobase GSEABase]; }; - PROPER = derive2 { name="PROPER"; version="1.14.1"; sha256="1wcvpfvj9c1g4yqj02lia3kchf080y81nvl9rb9mls5h6117dmbi"; depends=[edgeR]; }; - PROPS = derive2 { name="PROPS"; version="1.4.0"; sha256="150apwa4c80741kavf2ilz62575pbmjqkwnbgb095ddfqb2wp4ly"; depends=[Biobase bnlearn reshape2 sva]; }; - PROcess = derive2 { name="PROcess"; version="1.58.1"; sha256="0b8simjv3g1dn0dsxa11fzif24z9cmlvczzxzm354m6bkfanl1f0"; depends=[Icens]; }; - PSEA = derive2 { name="PSEA"; version="1.16.0"; sha256="0zw1jrrdl17fmdn3z18rdr86lb9lmpqrsdf9ilm172cxhjbq7iba"; depends=[Biobase MASS]; }; - PSICQUIC = derive2 { name="PSICQUIC"; version="1.20.0"; sha256="0h42hsvh2n0hib9gw4fqpri9lqdnaz6ivzcf406x54zdsgwalyzd"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; - PWMEnrich = derive2 { name="PWMEnrich"; version="4.18.0"; sha256="1v8yqczf5784w7a9d21jp3p2dcirrkg6ydccd8k8i0355x8yxxc9"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; }; - PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.10.0"; sha256="0rkkrriik0l010vzn46zm2zm87k38aihz6l5llp1wawwkyac8cla"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; - Path2PPI = derive2 { name="Path2PPI"; version="1.12.0"; sha256="1yc4hqycjd2zc87wiq9rrswb5f0x33vsd6d23gckn1sqvam2clqj"; depends=[igraph]; }; - PathNet = derive2 { name="PathNet"; version="1.22.0"; sha256="1n4g960m0j38snignsahaq7nr6bahln0cbqhgx530vwzsdv2xzx3"; depends=[]; }; - PathoStat = derive2 { name="PathoStat"; version="1.8.4"; sha256="15n8lmv9vgwh1ain21gfgyl5bfnkfs7rnjdjbz69bvy1k2nmgl3y"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; }; - PathwaySplice = derive2 { name="PathwaySplice"; version="1.6.1"; sha256="09glsv0hj8yzg79hjjpnfn59w12i7l0n2fpwzg98wiqx7yyza5pk"; depends=[annotate AnnotationDbi AnnotationHub BiasedUrn Biobase BiocGenerics DOSE dplyr EnrichmentBrowser ensembldb gdata geneLenDataBase GO_db goseq gplots gridExtra htmlwidgets igraph JunctionSeq KEGGREST mgcv org_Hs_eg_db org_Mm_eg_db plotly RColorBrewer reshape2 S4Vectors tibble VennDiagram webshot]; }; - Pbase = derive2 { name="Pbase"; version="0.22.1"; sha256="0z5g2wbjzzqfw0sjb537j84d4l8bvf8pjav5z39ypzx2inq2zzb5"; depends=[AnnotationFilter Biobase BiocGenerics BiocParallel biomaRt Biostrings cleaver ensembldb GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; }; - PepsNMR = derive2 { name="PepsNMR"; version="1.0.2"; sha256="0x7n8faxrczqwn1kkcp22vwag905pswvr2q198kqbh4fjkxgkmrx"; depends=[ggplot2 gridExtra Matrix matrixStats ptw reshape2]; }; - PharmacoGx = derive2 { name="PharmacoGx"; version="1.12.0"; sha256="1ddh6bmrddbdmqdpmyy5mlkqvhrk39c19lzybrirfclq6cydfh5g"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer reshape2]; }; - PhenStat = derive2 { name="PhenStat"; version="2.18.1"; sha256="1fq01k4cb4gyzh9knbidcqds2qm1wvlz114s6nldzhl3h0x5h6x5"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; - Pi = derive2 { name="Pi"; version="1.10.0"; sha256="03wzmcz57kdflicjb2wmnxg0fvfmbgizvql5164cf24fsi2lvbgi"; depends=[caret dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel glmnet Gviz igraph lattice MASS Matrix plot3D randomForest ROCR scales supraHex XGR]; }; - Pigengene = derive2 { name="Pigengene"; version="1.8.1"; sha256="13pmw7nf8fvn9bnnh7fwqgrlg589796nqv83snanqwqsp4fcklid"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; - Polyfit = derive2 { name="Polyfit"; version="1.16.1"; sha256="0nlclhj5ni09blwf5prpcp2iiflqk17ca3gqjl5shvl9y9v8nbqb"; depends=[DESeq]; }; - PowerExplorer = derive2 { name="PowerExplorer"; version="1.2.2"; sha256="14dzv3p79x95w6185r2srnmw1i8n6x2b1fd2chbx42b3xa65xliy"; depends=[Biobase BiocParallel data_table DESeq2 ggplot2 gridExtra MASS ROTS S4Vectors SummarizedExperiment vsn]; }; - Prize = derive2 { name="Prize"; version="1.12.1"; sha256="046wvhjqyyc79q88lzcx1jfg73f4sr83japiapzgm5gqnri1hs8r"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; - Prostar = derive2 { name="Prostar"; version="1.14.12"; sha256="0700nkpjmlw7540qms407mm94nsch1jzk8sf30k4qk7fn5rfl1wb"; depends=[BiocManager colourpicker DAPAR DAPARdata data_table DT future highcharter htmlwidgets later promises R_utils rclipboard rhandsontable shiny shinyAce shinyBS shinycssloaders shinyjqui shinyjs shinythemes shinyTree shinyWidgets webshot XML]; }; - ProtGenerics = derive2 { name="ProtGenerics"; version="1.14.0"; sha256="053mmxhzncqgigl2iqjlq56qzimlw2zzw31wpzw19rf7rld1vi3b"; depends=[]; }; - ProteoMM = derive2 { name="ProteoMM"; version="1.0.1"; sha256="0gyx7pfswxa7p6whyi2d10341vgc9yr3vvi7a2wj1padas9cm0m1"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; }; - ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.12.0"; sha256="049c0g20kbf12hs3r4il3gpr9chi2w2d2l0s7pkgc1sxyb0aydvs"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; - PureCN = derive2 { name="PureCN"; version="1.12.2"; sha256="109riqxc46f7x2psy096rhhpjzpk75j5i00x2842c4drps86bzy3"; depends=[BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; - Pviz = derive2 { name="Pviz"; version="1.16.0"; sha256="1qgavdwqp2zvixbvpm2mjqcbwcz2gw8kfj6zk9064m7zmh4qg3iz"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; - QDNAseq = derive2 { name="QDNAseq"; version="1.18.0"; sha256="04ff9nbckzrlb45mr2j0c3mlh1wcggq5bbl81zklhq203c5x1wc2"; depends=[Biobase BiocParallel CGHbase CGHcall DNAcopy GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; - QSutils = derive2 { name="QSutils"; version="1.0.0"; sha256="1z06c7f2jgr60j9rbarjx310mhy4n91chb3azvw0050z01rgxi02"; depends=[ape BiocGenerics Biostrings psych]; }; - QUALIFIER = derive2 { name="QUALIFIER"; version="1.26.1"; sha256="0656ffwvaiapj4jyksfmqrmwwjs5s9av8lpmy8d31x7iins2kps6"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; }; - QUBIC = derive2 { name="QUBIC"; version="1.10.0"; sha256="08yp8y6rcggrx69326f8gpx3arg9b6hq9fh1f2ngnd409lhlfxdn"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; - QuartPAC = derive2 { name="QuartPAC"; version="1.14.0"; sha256="0bm18r4yfz3z8dr8hhb1a9issggbrw3x3galvmar0wdr1is5mcfk"; depends=[data_table GraphPAC iPAC SpacePAC]; }; - QuasR = derive2 { name="QuasR"; version="1.22.1"; sha256="15lnrj8m8p1ns7iv5f2j0xshma3gpjp3lwry1s0axsxsk9khzrl0"; depends=[Biobase BiocGenerics BiocManager BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; }; - QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.16.0"; sha256="0ww0k2akcpzfxq454g3lcr34270pq6kxxngx23lyanbfqqffhzmr"; depends=[dplyr Rcpp yaml]; }; - R3CPET = derive2 { name="R3CPET"; version="1.14.0"; sha256="0ifvifwilpski32pp1z904s97f5g109b8d4l5yds6alpl9663hls"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; - R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.32.0"; sha256="15a9jfb5c9mnpas3qvq7ca90y8y1yfqbvhgz7k51rzyynzh5nkx8"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; - R4RNA = derive2 { name="R4RNA"; version="1.10.0"; sha256="1n6fhlj0rmk67gdzknx3fysyg46r5lcqrilqq5rhdzrr4gacwx3j"; depends=[Biostrings]; }; - RBGL = derive2 { name="RBGL"; version="1.58.2"; sha256="0vhnh47pswnp27c0zqcbnnsayfmq3cxcgrs9g860555ldqfl4cyl"; depends=[graph]; }; - RBM = derive2 { name="RBM"; version="1.14.0"; sha256="1yr1qjc7flgxxjngd55i9xjjc8r7gdhn8j8hwyhd4p5358z2qaqg"; depends=[limma marray]; }; - RBioinf = derive2 { name="RBioinf"; version="1.42.0"; sha256="1l2vqnrc6ilsi50zn9f1p174hwc63qhbn05z1ng3d2va3x3qb9hm"; depends=[graph]; }; - RCAS = derive2 { name="RCAS"; version="1.8.0"; sha256="0ss5hcg2m7gjji6dd23zxa5bd5a7knwcnada4qs5q2l4clgk39ad"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DBI DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo knitr motifRG org_Hs_eg_db pbapply pheatmap plotly plotrix proxy rmarkdown RSQLite rtracklayer S4Vectors topGO]; }; - RCASPAR = derive2 { name="RCASPAR"; version="1.28.0"; sha256="1d5mr6j7yfv9amdjyyysw79n4yr57ryxybbccc97jbkmqhijp806"; depends=[]; }; - RCy3 = derive2 { name="RCy3"; version="2.2.9"; sha256="04n73hgh2brfrl9rqmiq1afg7hpvq0l6zbl2h1yqzrgmxgzrx0cv"; depends=[BiocGenerics graph httr igraph R_utils RJSONIO XML]; }; - RCyjs = derive2 { name="RCyjs"; version="2.4.0"; sha256="1m5zxa5r9kjcfacgv8ny6pa2a5xd94kajmb054074r7av4ymig5z"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; }; - RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.20.0"; sha256="0agdz7r7qcrxmvcm3d6zs36p239ldhc01qa4c4b4dxvlsq5gh6wk"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; - RDRToolbox = derive2 { name="RDRToolbox"; version="1.32.0"; sha256="01dpaniy2chd7kim6q9lqq65pfs3y1z05jrhgjmrmc7hg0yp1zb1"; depends=[MASS rgl]; }; - REBET = derive2 { name="REBET"; version="1.0.0"; sha256="1m2czya7af35xqy9cgrdwwwvfqdq2g8s02jbwv5wl6r6lwhcgid2"; depends=[ASSET]; }; - REDseq = derive2 { name="REDseq"; version="1.28.0"; sha256="1kp7nl3z1w27vmcqkvwbyi6d7dsd125zih8zbzlh96axankcqsck"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; - REMP = derive2 { name="REMP"; version="1.6.1"; sha256="1q3011zbglgy2wrsampwslaf5wiz03ly62qf47mhi5pdngnsb6cn"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 caret doParallel foreach GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b2_hg19 impute IRanges iterators kernlab minfi org_Hs_eg_db ranger S4Vectors settings SummarizedExperiment]; }; - RGMQL = derive2 { name="RGMQL"; version="1.2.0"; sha256="0rvlsl9acjkpva4x1wxg7pyscr3pzdr9mw2k7yzy429ad0lpk81s"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; }; - RGSEA = derive2 { name="RGSEA"; version="1.16.0"; sha256="02df90fjqynw4r9jx55na6ky1g814463ipb4ag1f4605hhdnbhmq"; depends=[BiocGenerics]; }; - RGalaxy = derive2 { name="RGalaxy"; version="1.26.0"; sha256="1a0bswfqdv2z7kml32c42h7zv5ayam96ka9frndvkba36zlzysrw"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; }; - RGraph2js = derive2 { name="RGraph2js"; version="1.10.0"; sha256="0c53c4rrpqyna8yxcc0cgyx6b2fhd6fkwi2g7a4a8hsspja1qhcv"; depends=[digest graph rjson whisker]; }; - RIPSeeker = derive2 { name="RIPSeeker"; version="1.22.0"; sha256="1x2n1iyik4s67bxq0fl6fpf602k51g4pxjpjpxkgx1a5fsk61f2i"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - RITAN = derive2 { name="RITAN"; version="1.6.0"; sha256="16w7ypvchhl6ljaq2hga790ycg3hznvr7pc5mf0bah8kk524z6a6"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; - RIVER = derive2 { name="RIVER"; version="1.6.0"; sha256="1a7i2zdin9znp9z48wnlj4g9y0bmm6anaphhrihkfqmf0s9lcqwy"; depends=[Biobase ggplot2 glmnet pROC]; }; - RImmPort = derive2 { name="RImmPort"; version="1.10.0"; sha256="1gws1zkh5gzw0drw7c21wp2g8wskaagw0f3g1p41z91sffv8vvrm"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; - RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.6.0"; sha256="1kzsmglxq7lriz5vblprj7g1kbwzgcxjd2l1w12npb6j7vw8s598"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; - RLMM = derive2 { name="RLMM"; version="1.44.0"; sha256="17lmjhb0c5w4pp68z4h5ij93n9f31dy7aic40xd958zwxm5gnwyq"; depends=[MASS]; }; - RMassBank = derive2 { name="RMassBank"; version="2.10.1"; sha256="020ilicbbn9rs5pb5mc3dva862jsx1arxbpq45vxig9bbvk2gq73"; depends=[Biobase digest httr MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; }; - RNASeqPower = derive2 { name="RNASeqPower"; version="1.22.1"; sha256="15x78z3a6j462h4cp93qzrvajnq71p81bn9y6qj4kjv94wdx9v02"; depends=[]; }; - RNASeqR = derive2 { name="RNASeqR"; version="1.0.3"; sha256="07nj0iz25czfvywgl8pp1isd5vnskwnhw9w1mjjkn71sk8q5vxdc"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; }; - RNAdecay = derive2 { name="RNAdecay"; version="1.2.1"; sha256="1hpmr9nip3immkhdzq5qfxf00cdghyhhv8a7bvnan4m7l5c0q509"; depends=[ggplot2 gplots nloptr TMB]; }; - RNAinteract = derive2 { name="RNAinteract"; version="1.30.1"; sha256="14c9h9jqn4h6y28bacvhaib27cr64fljyiw8h7anrlfgqmn9v7hd"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; - RNAither = derive2 { name="RNAither"; version="2.30.1"; sha256="0n2wj8gldiiqpyl7i8i8ys6z4kcv076wyhsc5kirmvrzy031g7ls"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; - RNAprobR = derive2 { name="RNAprobR"; version="1.14.0"; sha256="0p2cs5ybkj2yjqkcpmrxggm874y05nnz85milx8hix2vdsx6snc7"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; }; - ROC = derive2 { name="ROC"; version="1.58.0"; sha256="1qxmxhx5dqnrvp2076512p64rdanaa7cd95zrs783255ifq5jb0v"; depends=[]; }; - ROTS = derive2 { name="ROTS"; version="1.10.1"; sha256="1d5ggkk47xybcaizfy756qimbf2falg9cld46mhqjp3xfbfvzsg6"; depends=[Biobase Rcpp]; }; - ROntoTools = derive2 { name="ROntoTools"; version="2.10.0"; sha256="0v0g4kpz3sc1aikwn59vjy75g0vdblw1nz0qrcwz48glh11qpzdz"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; - RPA = derive2 { name="RPA"; version="1.38.0"; sha256="04spiv0wp7wm6yx0c4qra148n381k9488j79i91by1qi79zm746z"; depends=[affy BiocGenerics phyloseq]; }; - RProtoBufLib = derive2 { name="RProtoBufLib"; version="1.4.0"; sha256="12r2i9dla3ids1ycfdm670qz61fkf9h5mdzq0q65jaw311dbnspq"; depends=[]; }; - RRHO = derive2 { name="RRHO"; version="1.22.0"; sha256="1p84kgin1vf6vy7la5v0d10l3kv2mnhbjxjykw7yk9faf8xnmsah"; depends=[VennDiagram]; }; - RSVSim = derive2 { name="RSVSim"; version="1.22.0"; sha256="0d99cmazqlsqy58hjs2x9ziyqs7qg084rrp05vnq7ncki7a6bfm1"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; - RSeqAn = derive2 { name="RSeqAn"; version="1.2.0"; sha256="0jphw3yadhgg0c93sywb7fblv2z54nq6lqrb4p7qx9v2rsv5dvqz"; depends=[]; }; - RTCA = derive2 { name="RTCA"; version="1.34.1"; sha256="0hhk3py6d1r4rl8xim2z3j266dx1bnxk1pxc24k61k5ni05nxjpw"; depends=[Biobase gtools RColorBrewer]; }; - RTCGA = derive2 { name="RTCGA"; version="1.12.1"; sha256="15ibhz60z2fgvpji8kdmpvsdprzqnc0wk4gd6kdrkr4m2s0jgw4j"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; - RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.12.1"; sha256="05gmj49hz4mdpsmp1brzha3swybgm1sqf6jyhnj8w2arwc0bh72y"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges IRanges limma RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; }; - RTN = derive2 { name="RTN"; version="2.6.3"; sha256="1g0xpm31h9yj68cl0pqhlr386hjg0781gp4wcr4hcf52s812wvw5"; depends=[data_table igraph IRanges limma minet mixtools RedeR S4Vectors snow SummarizedExperiment viper]; }; - RTNduals = derive2 { name="RTNduals"; version="1.6.2"; sha256="13f9gw0nrmcznyjcixgk615c1zfyf8w8j30psq66fnsiyjr45p8x"; depends=[RTN]; }; - RTNsurvival = derive2 { name="RTNsurvival"; version="1.6.2"; sha256="0npmn1x5w8g15m14br44zc9vivxlbvgfa74gsa07gbsvlsm466dn"; depends=[RColorBrewer RTN RTNduals scales survival viper]; }; - RTopper = derive2 { name="RTopper"; version="1.28.0"; sha256="0blpza1kq7qh9yb15hrmkfrc7awljafwxkr5kq368yk2gkvjny91"; depends=[Biobase limma multtest]; }; - RUVSeq = derive2 { name="RUVSeq"; version="1.16.1"; sha256="0qk7q3ab7k133divfkp54zsmvsmb9p8r09pkh2caswrzrn8achzv"; depends=[Biobase EDASeq edgeR MASS]; }; - RUVcorr = derive2 { name="RUVcorr"; version="1.14.0"; sha256="05lg37rmf9skqcpnd08v6wnh7sfs449hwwq6nw2hkgy9faip14lz"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; - RUVnormalize = derive2 { name="RUVnormalize"; version="1.16.0"; sha256="1habqdv35v9ypvfmfaxjqpka67bs6hzf4ph9b0gqd67mbfnb49dv"; depends=[Biobase RUVnormalizeData]; }; - RVS = derive2 { name="RVS"; version="1.4.4"; sha256="1zvbin60p81qyk2c0m88dl94ivzyf4cpjdf2hnw8igmvlxszmb8k"; depends=[GENLIB gRain kinship2 snpStats]; }; - RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.6.0"; sha256="1w02nnxpmx05gn6d9kjnahdn9kynbg1szm96c03gh4961zknn3r3"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.2.0"; sha256="022vckcc46bkhfhi2fzgawhf54hi6y2p5ia4v3x3lj221d7hcaax"; depends=[dnet igraph Matrix]; }; - RankProd = derive2 { name="RankProd"; version="3.8.0"; sha256="0jmpwpmj3y13ylk7riyicywpring14dhq4862jgalsjjwa22zzd0"; depends=[gmp Rmpfr]; }; - RareVariantVis = derive2 { name="RareVariantVis"; version="2.10.0"; sha256="0fb59a5568h0wz92blr6m3w01jnzh3kkil2p82fh2b8n2rv40s66"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - Rariant = derive2 { name="Rariant"; version="1.18.0"; sha256="1wzm0qn8ar6k6fgp8hv79qncc0gca9hks3vzzkqq8ac2ml07zl37"; depends=[BiocGenerics dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; - RbcBook1 = derive2 { name="RbcBook1"; version="1.50.0"; sha256="1900prjqspn5zripf9h9jd5zkdrcc5477rsrflal6n5jdf9lqz3v"; depends=[Biobase graph rpart]; }; - Rbowtie = derive2 { name="Rbowtie"; version="1.22.0"; sha256="00vpszsjkvid25sjrpzw1dylwmgv27z67njvg8h1axnb09a7gnjw"; depends=[]; }; - Rbowtie2 = derive2 { name="Rbowtie2"; version="1.4.0"; sha256="045cmfwqzcj4zn6r16hkpmr5sd5y0mxvrs5yynf460fdz2p418cr"; depends=[]; }; - Rcade = derive2 { name="Rcade"; version="1.24.0"; sha256="0xx19zxrfjawny75cmp75f1aarngmz8p0vy2ryw0v1qdfm1aby87"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; - Rchemcpp = derive2 { name="Rchemcpp"; version="2.20.1"; sha256="00sb9xaj51vna030c6nkb27r3ymj98a27kl97ksa86di3a8n4162"; depends=[ChemmineR Rcpp]; }; - RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.22.0"; sha256="10kk9h1cknpdgbmn5k7aabrfr60n66i5yjxbj81x7ji6yk1ramcg"; depends=[flowType graph Rgraphviz sfsmisc]; }; - RcisTarget = derive2 { name="RcisTarget"; version="1.2.1"; sha256="0ggwhfm5yl68qapbr3sxz206mpc8vqi9g4x3isxvrcf94q9jb7iq"; depends=[AUCell BiocGenerics data_table feather GSEABase R_utils SummarizedExperiment]; }; - Rcpi = derive2 { name="Rcpi"; version="1.18.2"; sha256="0kd61ajb4lm5b974476204kw9pkavi2l2n7m6zynblpdccpp913f"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; - Rdisop = derive2 { name="Rdisop"; version="1.42.1"; sha256="0pir401z19wx433sxr2r01a5ckd4myygyv0jxj4wfq1fkfpmi1kl"; depends=[Rcpp RcppClassic]; }; - ReQON = derive2 { name="ReQON"; version="1.28.0"; sha256="1llklca4bz2plkmwgvpw7xrn8hxh1vnf6sk91z1yzld49w1b6rxc"; depends=[rJava Rsamtools seqbias]; }; - ReactomePA = derive2 { name="ReactomePA"; version="1.26.0"; sha256="1kglvgn1sjnx9rm45lxp0ji19vzb8qlvjs01agsdbvkn19im5nkm"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; }; - ReadqPCR = derive2 { name="ReadqPCR"; version="1.28.0"; sha256="1c1l7nmnv6bcgnamjja423w5lmfsz8wiv4gv0x22ym1mv3293776"; depends=[Biobase]; }; - RedeR = derive2 { name="RedeR"; version="1.30.0"; sha256="1fq3x0sf146pn0ksddachisrd4782d7qyk1vk96dk7h0knvj9jl9"; depends=[igraph]; }; - RefNet = derive2 { name="RefNet"; version="1.18.0"; sha256="0z7k4f38gphmxqjwvwhp2q0l6ljlpzhl69v1yja0c7gfmhr1lq55"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; }; - RefPlus = derive2 { name="RefPlus"; version="1.52.0"; sha256="1myrgsxh9713hrzzhzln20iabq520xqdmm8narg79wla5rh3vcq7"; depends=[affy affyPLM Biobase preprocessCore]; }; - Repitools = derive2 { name="Repitools"; version="1.28.0"; sha256="1v08fmn4al3rh20zr3afafmxyapdxylbbsf5s8j1wwfz60ysv557"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; - ReportingTools = derive2 { name="ReportingTools"; version="2.22.1"; sha256="1g9pw6gjc6a81758zd1c1ci9q2wy7jcg3kn3iq77cb0kgbqdb5ia"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; - Rgin = derive2 { name="Rgin"; version="1.2.0"; sha256="0jj8asqp7p45rlag34m0x2lasw6mdj4rdi4ywnm5bk2cim50pji6"; depends=[RcppEigen]; }; - Rgraphviz = derive2 { name="Rgraphviz"; version="2.26.0"; sha256="0bp6517xsih0wng2rgkh9z4r1afqhwl3h04z6ssm7p4cdj0ahm4y"; depends=[graph]; }; - Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.4.3"; sha256="0hjhjvg2kss71fkmxlbgnyyy1agwzgq57rxkgkm4riw82x2rvw7q"; depends=[]; }; - Rhtslib = derive2 { name="Rhtslib"; version="1.14.1"; sha256="13fv78sk5g0gqfl3ks3rps3zc1k66a4lzxvgn36r7ix43yxk7hnr"; depends=[zlibbioc]; }; - RiboProfiling = derive2 { name="RiboProfiling"; version="1.12.0"; sha256="1njvkd1khmf3rbp3dkz5z63wp79z4wmk4kzd3p3amky3w5by070z"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; - Ringo = derive2 { name="Ringo"; version="1.46.0"; sha256="1zg8sq4hqq3yldghfs1m2jn15qmdk6i1pr7c3aq73a6k99qyzihd"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; - Risa = derive2 { name="Risa"; version="1.24.0"; sha256="1ln68rxv7wx96b3p2fh70jva07j9hj1cfflxyw34i32qkp2840hm"; depends=[affy Biobase biocViews Rcpp xcms]; }; - Rmagpie = derive2 { name="Rmagpie"; version="1.38.0"; sha256="0di8vf3cj7y2srydjq74r7gmksqhjh3r8wmffq1k96knd68nx0sx"; depends=[Biobase e1071 kernlab pamr]; }; - RmiR = derive2 { name="RmiR"; version="1.38.0"; sha256="0gv6cm5mh54xh2n25mpy6ak849rcppnajq04y7nw9hjv1i66g125"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; - Rmmquant = derive2 { name="Rmmquant"; version="1.0.4"; sha256="085yn4qg5sn7cbl7gj3b56n7mxiagdj4k8zqqd131dsd5kzwlylc"; depends=[BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - RnBeads = derive2 { name="RnBeads"; version="2.0.1"; sha256="0lfvl0k138dhniffb4c8wdicsihajr6rnrfmmmcgxk2wh6ciibi5"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; - RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.14.1"; sha256="1gxsp3nr5ww3xlqyac704lczsa5xxyz748lpfpkghj4mi3h0lwa8"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; - Rnits = derive2 { name="Rnits"; version="1.16.0"; sha256="1l96jvyq0afkv2k3gasf0420wbhrs1nv1f5xx0h9f4mhcx81hr7q"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; - Roleswitch = derive2 { name="Roleswitch"; version="1.20.0"; sha256="15cb4gbwgkjvidfdlvc2qf62jf3nvddqni9bbymcyi2pnpd1n6lr"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; }; - RpsiXML = derive2 { name="RpsiXML"; version="2.24.0"; sha256="1l9p5mi7b78cwh4pvwqwxx15rr4hms11m5r0vp0d2krfp7ih9m8h"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; - Rqc = derive2 { name="Rqc"; version="1.16.2"; sha256="1cxa6c9k9ahcji2c979hr0xz9hv7m8w4l6aiczfdhcnjraa4k2qq"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; - Rsamtools = derive2 { name="Rsamtools"; version="1.34.1"; sha256="02paq7klabdkaf1b8pmmbpmyqsj3yncnfsz62rgka6r4dpsilwk9"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; }; - Rsubread = derive2 { name="Rsubread"; version="1.32.4"; sha256="1d0gc3pa7zjz2sa4689xxzppikv7xd6k1d8f1x7h973cyiq5iaj3"; depends=[]; }; - Rtreemix = derive2 { name="Rtreemix"; version="1.44.0"; sha256="013x6rdxsxynr8s0x8a1nk7xcanvgkm2lid9bip3v240bg9wwha4"; depends=[Biobase graph Hmisc]; }; - S4Vectors = derive2 { name="S4Vectors"; version="0.20.1"; sha256="18whrw67nxn82xshckl2pjy7d14sa3c27h3n9naqyqwz88lr6dzg"; depends=[BiocGenerics]; }; - SAGx = derive2 { name="SAGx"; version="1.56.0"; sha256="0p81jfm7fr907npbl1qrl4yswbz2a2pgmng5ww68xwmkayxkns79"; depends=[Biobase multtest]; }; - SANTA = derive2 { name="SANTA"; version="2.20.0"; sha256="1x4sq1vxvgrngq5aahbc2sgn1vw8l3d4b24fm0lldvn2b8jprzx7"; depends=[igraph Matrix snow]; }; - SBMLR = derive2 { name="SBMLR"; version="1.78.0"; sha256="02xcsaq2zlsvxj1zs2v4syw0k7fsiq826nny8kazvirkzpqmi446"; depends=[deSolve XML]; }; - SC3 = derive2 { name="SC3"; version="1.10.1"; sha256="04hqbw8k3f2nki5c9brkjlqm072cyw1ppgwlr7id3xqmg4w38l6w"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; }; - SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.24.1"; sha256="00sfnc9pdw8j7gbrc6z4v9ji8kwndabr8zxw8agkbf2zz8pmq4jx"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; - SCBN = derive2 { name="SCBN"; version="1.0.0"; sha256="0cfmpwpp9drz13rrrwg030db1jprxfw2nkxlwlwscaj1vb4q69fv"; depends=[]; }; - SCnorm = derive2 { name="SCnorm"; version="1.4.7"; sha256="1jlfxwqy1gm1v0a40dd3p5zicr0wa4m7k4nqnf5ypbkngf31zfv9"; depends=[BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; }; - SDAMS = derive2 { name="SDAMS"; version="1.2.1"; sha256="0cr1mazrbq4hc2gql7bj4pvqd1vdzvpmg6r3dhvybb4prpdl25ys"; depends=[qvalue SummarizedExperiment trust]; }; - SELEX = derive2 { name="SELEX"; version="1.14.0"; sha256="1hcsngnxv4q0ig80nr91x1qlxi2swcx9xlvayng25izzjc6yj1k8"; depends=[Biostrings rJava]; }; - SEPA = derive2 { name="SEPA"; version="1.12.0"; sha256="04dl578fm1zdd30q9d5dxhcm1xvkn19ijda07yxdsxifik4297fp"; depends=[ggplot2 org_Hs_eg_db org_Mm_eg_db reshape2 segmented shiny topGO]; }; - SEPIRA = derive2 { name="SEPIRA"; version="1.2.0"; sha256="1lvbx621kspl3ry8hbqgf2chins420vn26x81x5q1skvhk9s6h03"; depends=[corpcor limma]; }; - SGSeq = derive2 { name="SGSeq"; version="1.16.2"; sha256="1s4pipdzppnixqx4x6xcy5pz1ps9mhjjxy1zj5h5dy2wi13mnsfs"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; - SIAMCAT = derive2 { name="SIAMCAT"; version="1.2.1"; sha256="1gpcir6lcfg5q3m2zisvbnva8vx8mq1pml8na9nmkg92rdv42hwk"; depends=[beanplot corrplot glmnet gridBase gridExtra infotheo LiblineaR matrixStats mlr ParamHelpers phyloseq pROC PRROC RColorBrewer scales stringr]; }; - SICtools = derive2 { name="SICtools"; version="1.12.0"; sha256="06ypc7xqn8rpdyp16rlwsaw37gb94z9c980fwadbjvf2bzga5xwd"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; - SIM = derive2 { name="SIM"; version="1.52.0"; sha256="16rkh4nnpm1bzq9z85s64fl09ymrwifmdcanwg4q8vnasqdcyp01"; depends=[globaltest quantreg quantsmooth]; }; - SIMAT = derive2 { name="SIMAT"; version="1.14.1"; sha256="096cmj3xbcddyphy5z5ikwm459fqkibdxzqd24815z6yxld8bmf6"; depends=[ggplot2 mzR Rcpp reshape2]; }; - SIMD = derive2 { name="SIMD"; version="1.0.0"; sha256="15ivvgjhsabg9lvdfylqv4640jvmk65kj1lb3z8h7fwc24qhr6aj"; depends=[edgeR methylMnM statmod]; }; - SIMLR = derive2 { name="SIMLR"; version="1.8.1"; sha256="1j6v950dgbxbmwmn0yhb69six4cs1hlzr24dz7rxpdf84r63zsls"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; - SISPA = derive2 { name="SISPA"; version="1.12.0"; sha256="1vqgm6wiymvy83zj71anqknvya0h03pwcavc0gn6dfmxc2rhhk85"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; - SLGI = derive2 { name="SLGI"; version="1.42.0"; sha256="09665cxx7rl5aai10pcj5wwq90psygwpj5776vp8fjmv1bq8lgx8"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; - SLqPCR = derive2 { name="SLqPCR"; version="1.48.0"; sha256="1izzqzn42pzfxx28qj5nviwqd63jicw9gifk1m9w2r3j7asqwpqy"; depends=[]; }; - SMAP = derive2 { name="SMAP"; version="1.46.0"; sha256="0aqlqq0q5f5n9q8xfharzy55gx7p0gzijndbljj656jpy5dq6l9v"; depends=[]; }; - SMITE = derive2 { name="SMITE"; version="1.10.1"; sha256="1hmsv8i1np9m4dgskwjjzmprdixvx9yakx6y2p2icsjsppvqd69l"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGG_db org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; - SNAGEE = derive2 { name="SNAGEE"; version="1.22.0"; sha256="1r9bvjc9l3xs1i9hrfzajhv6yb25qgnjgh1wyxrg0lky0n00z93m"; depends=[SNAGEEdata]; }; - SNPRelate = derive2 { name="SNPRelate"; version="1.16.0"; sha256="0p6lrjj0v63f2y31727my72c4pnqmyb22d6rpi3yk556d21nlbyr"; depends=[gdsfmt]; }; - SNPchip = derive2 { name="SNPchip"; version="2.28.0"; sha256="0vlrgraczyv4si4mrgssh6ijvq02qnb5h186rzqz0ssscjndh111"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses S4Vectors SummarizedExperiment]; }; - SNPediaR = derive2 { name="SNPediaR"; version="1.8.0"; sha256="124nw9ncf2mlkrw11v0azl69hhvj7cc8zyd78i16n8biw8pcphb7"; depends=[jsonlite RCurl]; }; - SNPhood = derive2 { name="SNPhood"; version="1.12.0"; sha256="1f6rhlkisdx8psl7d2anxm03l205aas2iwr2par2q4bl3v10aqky"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - SPEM = derive2 { name="SPEM"; version="1.22.0"; sha256="1qy92c8hjlxiji8bwzfmwf2nndnafqfmxpkxxwz3xsa9nvbsy22j"; depends=[Biobase Rsolnp]; }; - SPIA = derive2 { name="SPIA"; version="2.34.0"; sha256="1x9rkhza6wky0wfy5bb4bjlmwlhpap9l7mc2svk15nv6r7dwr0v8"; depends=[KEGGgraph]; }; - SPLINTER = derive2 { name="SPLINTER"; version="1.8.1"; sha256="0s9cr79xarry5g2s1qp0dp0lp6y49asnbc4dcdrm9j7gqmd78s3l"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr S4Vectors seqLogo stringr]; }; - SPONGE = derive2 { name="SPONGE"; version="1.4.0"; sha256="15f7n452nn0avkylvrh49c2s9k2bnfzn4i6d58k8dp71vld0n07i"; depends=[Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; - SQUADD = derive2 { name="SQUADD"; version="1.32.0"; sha256="02z9mcbwaprjpwbbbyxi50hkhi13zm4sa9qy43bkha98i2r2flkn"; depends=[RColorBrewer]; }; - SRAdb = derive2 { name="SRAdb"; version="1.44.0"; sha256="1d2fbgzz9vrv1z8wj5pgi8f31dbd6zh8kn76qw972b3s3zd9apni"; depends=[GEOquery graph RCurl RSQLite]; }; - SRGnet = derive2 { name="SRGnet"; version="1.8.0"; sha256="0xcnkdnh7ihjay60fig6vq3xs5953m9ar3pysrka8yi1pfk9j4xx"; depends=[DMwR EBcoexpress gbm Hmisc igraph limma MASS matrixStats pvclust]; }; - SSPA = derive2 { name="SSPA"; version="2.22.1"; sha256="0540i0yfpxzyx2cvsfmd6ymsc4shalpvx134fs9rhaw9l9y17c9n"; depends=[lattice limma qvalue]; }; - STAN = derive2 { name="STAN"; version="2.10.1"; sha256="0fm0y4nks74rqn5fwq8mrg687mnikjhf2rg7fk815l2d52zpsqgk"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; - STATegRa = derive2 { name="STATegRa"; version="1.18.0"; sha256="0928yjgaqgx0axiwfrff1dhqcqbjh5hqdsf8607da4ncf58qcglk"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; - STRINGdb = derive2 { name="STRINGdb"; version="1.22.0"; sha256="0xfcxq1h4c756rfz1pkcq8zigf0lacrskxzid28lzawd047l224h"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; - STROMA4 = derive2 { name="STROMA4"; version="1.6.1"; sha256="1iw5q8mz8fgjx9prgdp5y11gnrz37rjllbb2xmlvvk92xc06s3f3"; depends=[Biobase BiocParallel cluster matrixStats]; }; - SVAPLSseq = derive2 { name="SVAPLSseq"; version="1.8.1"; sha256="0sd2bhx19pynwm2k4811k0l846cc9vdhf9g7h73kjipmh8fq42lg"; depends=[edgeR ggplot2 limma lmtest pls SummarizedExperiment]; }; - SVM2CRM = derive2 { name="SVM2CRM"; version="1.14.0"; sha256="0m8x176kaf7k4zfb7cyxan4if42v4g3w3yr24a35d3a0yhn9lkgb"; depends=[AnnotationDbi GenomicRanges IRanges LiblineaR mclust pls ROCR rtracklayer squash SVM2CRMdata verification zoo]; }; - SWATH2stats = derive2 { name="SWATH2stats"; version="1.12.1"; sha256="1j92121a48lz5bvxa9p3k1h7j1qi0za7z1vqmi683afn15j7cbmb"; depends=[biomaRt data_table ggplot2 reshape2]; }; - SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.36.1"; sha256="19mmpn10m1vr9c13c9s26jmfhi2ha3w8nkldw2r6ci61vwldicrx"; depends=[]; }; - ScISI = derive2 { name="ScISI"; version="1.54.0"; sha256="1xs5vwgvcq72jiir5sl99z9pa4kh28jaidj1h31cvfsz0yjkfsl9"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; - Scale4C = derive2 { name="Scale4C"; version="1.4.0"; sha256="12d8l6j57gwnrigzyprfw03rzgsni7n75ws2hi1ldybx7bx3nlag"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; }; - Sconify = derive2 { name="Sconify"; version="1.2.1"; sha256="141iq9k1psyc25vf1i8hh52i3dckas1l928yjr59p25qng0z4hfy"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; }; - SemDist = derive2 { name="SemDist"; version="1.16.0"; sha256="086lparkzxssz78dn67x4f7c3pw45y7gj2ldvhmkfqyynfm57giq"; depends=[annotate AnnotationDbi GO_db]; }; - SeqArray = derive2 { name="SeqArray"; version="1.22.6"; sha256="1aj6k5vr1rcjavm8q65cw93wwb3kjb1hg74r7nwc5rl94sg0gsan"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - SeqGSEA = derive2 { name="SeqGSEA"; version="1.22.1"; sha256="1c4lfs9bfdmbq732c13fvph5gwp6ac0fxa489al9lghwxnbkjpqf"; depends=[Biobase biomaRt DESeq doParallel]; }; - SeqSQC = derive2 { name="SeqSQC"; version="1.4.0"; sha256="1dg4dm45s7l5dgq2cr6g9a5a65jlpf801z3a1x42h36ybgs7gg3j"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; - SeqVarTools = derive2 { name="SeqVarTools"; version="1.20.2"; sha256="03z40cmymq6agbmp061kvk4xm4cgilb3gyls5ymwyn4p56m0ks2a"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix rlang S4Vectors SeqArray tidyr]; }; - ShortRead = derive2 { name="ShortRead"; version="1.40.0"; sha256="0iks123i1adkb9i2q4wvfqdmmj9dy867jvngj9757y8gj6xbcpy1"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; - SigCheck = derive2 { name="SigCheck"; version="2.14.0"; sha256="0k00lrzpjfdcp3yvjbd1bc3710pa0dd884k4yyq43nv0cv9f4szp"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; - SigFuge = derive2 { name="SigFuge"; version="1.20.0"; sha256="0z78yg43wklzrpqawpprgb6nm1wngkd97g09aa9nzv91p05k85dp"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; - SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.20.0"; sha256="0n5awvsjz215g6h0kz6mzhzxw3vnhbf16b1n3bkqb7kv4cdrd4vq"; depends=[Biobase limma mclust Ringo]; }; - SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.4.1"; sha256="12139kk9cqgzpm6f3cwdsq31gj5lxamz2q939dy9fa0fa54gdaq4"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; }; - SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.18.0"; sha256="013dslbyq55a41d3n842brjk2bq1kxw0r18mb6drgbxx2sflzc02"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; - SpacePAC = derive2 { name="SpacePAC"; version="1.20.0"; sha256="1qm71d11ggwhkfk1rlq8zx2mjz7942ixcda1pgrd9m537zhjy469"; depends=[iPAC]; }; - SparseSignatures = derive2 { name="SparseSignatures"; version="1.2.0"; sha256="0wvlsdr75na5zi92hgj2bnxcxm8z9p8f99nfg6x3jzi39binwfr8"; depends=[Biostrings BSgenome BSgenome_Hsapiens_1000genomes_hs37d5 data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls]; }; - SpeCond = derive2 { name="SpeCond"; version="1.36.0"; sha256="0xx3wdfadw3jgmvvhsd2irdgqdd8pwlprcy07i3j2vja9ji0cx5f"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; - SpidermiR = derive2 { name="SpidermiR"; version="1.12.1"; sha256="1xz6rygpdc6f78dcg56fqblair1dswn2r6afycny94m3kllhc4hb"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; - SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.22.2"; sha256="19isf8wxy7lpaqr4zy5319sx9r2bm6mh8djgcbabg6ns198iy0kq"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; - StarBioTrek = derive2 { name="StarBioTrek"; version="1.8.5"; sha256="1z79ylbjsy78ziji641h9jyqdv042csqmvr9wwhwz410xvqmh8ri"; depends=[AnnotationDbi e1071 ggplot2 graphite igraph MLmetrics reshape2 ROCR SpidermiR]; }; - Starr = derive2 { name="Starr"; version="1.38.0"; sha256="1rrs366d8yr02077v34l6yr8w361s94zira2gcf935kkmfrclgij"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; }; - Streamer = derive2 { name="Streamer"; version="1.28.1"; sha256="0spqdjmfz1iaa6rcmbzn9d8z60cs1k0smvnnsdjlg7frdh039ra8"; depends=[BiocGenerics graph RBGL]; }; - SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="2.0.1"; sha256="18gmzwxjwg8j63z213x8r0j6jpmgx4yca29495c2hp4r9gv6hbzr"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; }; - SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.12.0"; sha256="07805572xhpj5mfwq6kw1ha21wgalqvhh4ydvafyl1bnf3r20vps"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; }; - Sushi = derive2 { name="Sushi"; version="1.20.0"; sha256="0dv5di0hgbvk9cxnqhyf18mdjl50k6bk00a89r6zgp83rbxwr1r8"; depends=[biomaRt zoo]; }; - SwathXtend = derive2 { name="SwathXtend"; version="2.4.0"; sha256="0986srxbi3f7pfnhghh9dznwrl9k5qrcmcf1vqa3lg06bwz7pbsc"; depends=[e1071 lattice openxlsx VennDiagram]; }; - SwimR = derive2 { name="SwimR"; version="1.20.0"; sha256="0sgci3rs4kak79yibcvxw3mjb30y9q8hacqykrpav2sjyqc6fcy1"; depends=[gplots heatmap_plus R2HTML signal]; }; - TCC = derive2 { name="TCC"; version="1.22.1"; sha256="0yfjlr5pgdnkrcv97cqhkm5xdn7dlspbf3fd60ai8zm2iw62x031"; depends=[baySeq DESeq DESeq2 edgeR ROC]; }; - TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.10.5"; sha256="1p73950jyvnbilpr4rzwmxw2bdi3h7lb2qiaqvm4rahmxmymy9nj"; depends=[biomaRt circlize ComplexHeatmap ConsensusClusterPlus data_table doParallel downloader dplyr EDASeq edgeR genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel ggthemes gridExtra httr IRanges jsonlite knitr limma matlab plyr R_utils RColorBrewer readr rvest S4Vectors scales selectr sesame stringr SummarizedExperiment survival survminer sva tibble tidyr XML xml2]; }; - TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.8.1"; sha256="1bj4pvchg0fj6gifbkg79fi314ssl8zp4rylp2ib0jfliqjx5199"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr sesame sesameData shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; }; - TCGAutils = derive2 { name="TCGAutils"; version="1.2.2"; sha256="00wi93lxq06aczjj9g5drs4jy6c4md550hbqxf6p11f07mh7kqcy"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; }; - TCseq = derive2 { name="TCseq"; version="1.6.1"; sha256="01lakq59skdivgyb613x4rwxfap9iiccwi2ixd0nl7vw97wsjfc3"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; - TDARACNE = derive2 { name="TDARACNE"; version="1.32.0"; sha256="0b7p7pl9sn2g3f7wv405nwng2xknxqhdwqm2bkr4czxcrmwdal5f"; depends=[Biobase GenKern Rgraphviz]; }; - TEQC = derive2 { name="TEQC"; version="4.4.0"; sha256="16aj8nadcpnv1lqqz7pfss7vc2s5h0k79ahxb4l4405j8yrf16hl"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; - TFARM = derive2 { name="TFARM"; version="1.4.0"; sha256="1bi7j7x8libijsf7c144fbf456f5vhaj8b3avdil49qa4k78623w"; depends=[arules fields GenomicRanges stringr]; }; - TFBSTools = derive2 { name="TFBSTools"; version="1.20.0"; sha256="18iqr2xsmgkmm5x4dz1vm9ig13x9vb1kvqxc0gpc4pzanf3w6jrp"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; - TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.2.3"; sha256="04qhwx6kmgyiasm2kynacwmd0i17b1bxr3ivg7jw3nr2dmg21h4g"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - TFHAZ = derive2 { name="TFHAZ"; version="1.4.0"; sha256="18mfmcbb5vfr2c96gai3hdzvbb3jzfnmmrclcdp9shrpwg6l1ipd"; depends=[GenomicRanges IRanges S4Vectors]; }; - TFutils = derive2 { name="TFutils"; version="1.2.0"; sha256="1gppabscwfbqyvwrnl7mppw9wp528plp3bxq7g73hhgackfwnwkc"; depends=[dplyr magrittr miniUI shiny]; }; - TIN = derive2 { name="TIN"; version="1.14.0"; sha256="0n5lx8pg066z9adjsfnslxw6fv0w0ibv7nk2yz8qaiq6zivvcc1y"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; - TMixClust = derive2 { name="TMixClust"; version="1.4.0"; sha256="03i9fgq29xr3h72c2scb4fa6305l7bpwj6hgk0j1v7ark6xz5xqz"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; - TPP = derive2 { name="TPP"; version="3.10.1"; sha256="00rfxhzamz45phav239xki8jy9bj7f0r03wrl9d09ir5amis271p"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown stringr tidyr VennDiagram VGAM]; }; - TRONCO = derive2 { name="TRONCO"; version="2.14.2"; sha256="1cqkk6zsfsjpq8iidvmpfvkfak3ryp2bl9p04in0sn8sl9is6nsq"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; - TSCAN = derive2 { name="TSCAN"; version="1.20.0"; sha256="1yas32djld4dlsmzi65dflmnrff48m7vb6j7wgr44jip416mh7l1"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; - TSRchitect = derive2 { name="TSRchitect"; version="1.8.9"; sha256="0i5i7m2rfqgnr2n39hfdgbvlhm8aqa6c77i7jvp66lapskww4rgb"; depends=[AnnotationHub BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - TSSi = derive2 { name="TSSi"; version="1.28.0"; sha256="1i0qcp5nygfny8pq6x70miig8gcf0an91rckci602m8il2x66rmp"; depends=[Biobase BiocGenerics Hmisc IRanges minqa plyr S4Vectors]; }; - TTMap = derive2 { name="TTMap"; version="1.4.0"; sha256="0cwajx9kfgs4dz10j88fbg5jlzj3yr6im23972swab58kl2n30vz"; depends=[Biobase colorRamps rgl SummarizedExperiment]; }; - TVTB = derive2 { name="TVTB"; version="1.8.0"; sha256="058h38x6x69jsp8qsdy7mz9wjjvhw4dwbph14qgqvagbaiaj7v19"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; - TarSeqQC = derive2 { name="TarSeqQC"; version="1.12.0"; sha256="1p1fwmkikh6a6sff3hmdxc3z4ypxz2iv1j544gfmsq47pibn8cgp"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; - TargetScore = derive2 { name="TargetScore"; version="1.20.0"; sha256="0kxiv5rghq3fw416gg3z7gfram146hjaf5pjd5hbyvy7rydilvbz"; depends=[Matrix pracma]; }; - TargetSearch = derive2 { name="TargetSearch"; version="1.38.2"; sha256="1vad4kxsanmjk78wjqq6lq3mjif01b89f09mhg0rwp902bdqlk35"; depends=[ncdf4]; }; - TimeSeriesExperiment = derive2 { name="TimeSeriesExperiment"; version="1.0.4"; sha256="03ny8w0z29jblph8nsysrqm7l2m2qpij52415vv1an4wpv821pgd"; depends=[DESeq2 dplyr dynamicTreeCut edgeR ggplot2 Hmisc limma magrittr proxy S4Vectors SummarizedExperiment tibble tidyr vegan viridis]; }; - TissueEnrich = derive2 { name="TissueEnrich"; version="1.2.1"; sha256="13nbcrj441wrbjn8xbrb8fn802bimhnaxjb980bn55l0ix7npy1c"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; }; - TitanCNA = derive2 { name="TitanCNA"; version="1.20.1"; sha256="0vp5i30n3f8kschal06i3v4szl1vl3lvry522csxdax3pram90g8"; depends=[data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges Rsamtools VariantAnnotation]; }; - TnT = derive2 { name="TnT"; version="1.4.0"; sha256="0cza7l550ly35w0c1xjvixgxwdl53v90q0rnb6i7jj6yxgq4ppwq"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; }; - ToPASeq = derive2 { name="ToPASeq"; version="1.16.1"; sha256="0j54fvcs7ynd6n81x07r2xra3l1fr1yfv8gf46r77gzmcn1y39vs"; depends=[graph graphite Rcpp]; }; - TransView = derive2 { name="TransView"; version="1.26.1"; sha256="1y2cdyg0hixm3zxasib18ql9917vnf43cjn9wpkx52fqfwa62ly3"; depends=[BiocGenerics GenomicRanges gplots IRanges Rsamtools S4Vectors zlibbioc]; }; - Trendy = derive2 { name="Trendy"; version="1.4.6"; sha256="0xk3xyx9094ymwfxabgqd0pykwhi8izjpck6dfm16chjlq3hik69"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; }; - TurboNorm = derive2 { name="TurboNorm"; version="1.30.0"; sha256="0a3f1zgj914rklrdilcnqfcr4g3mhg1bzfzxr6nn2cqin47hlakp"; depends=[affy convert lattice limma marray]; }; - TxRegInfra = derive2 { name="TxRegInfra"; version="1.2.1"; sha256="1qvc0lb3x3s1hv1qw1yih79kdd7pa5wa9wdd94yd8z4vfasmfvav"; depends=[BiocParallel GenomeInfoDb GenomicRanges IRanges mongolite RaggedExperiment rjson S4Vectors SummarizedExperiment]; }; - TypeInfo = derive2 { name="TypeInfo"; version="1.48.0"; sha256="0h2jnshr2sgyay3isiapfagjjh4wnff7nw711j4gxw9wg328w24l"; depends=[]; }; - UNDO = derive2 { name="UNDO"; version="1.24.0"; sha256="0yins1aw7gfp5qxmsai4l59nl5i6diq1h2frvdshsg6dbfxkzy67"; depends=[Biobase BiocGenerics boot MASS nnls]; }; - Ularcirc = derive2 { name="Ularcirc"; version="1.0.0"; sha256="1h4pv78x78wlgq0zmdjgdapjp7bxzdkw078pq9h6xzhkwvmyilz3"; depends=[AnnotationHub Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicFeatures gsubfn httpuv mirbase_db moments shiny shinyFiles Sushi yaml]; }; - UniProt_ws = derive2 { name="UniProt.ws"; version="2.22.0"; sha256="02rb0ygc3pikb8qbi8134n9hjzza4n3bvqbqfl5dqb2n1ibkknmq"; depends=[AnnotationDbi BiocFileCache BiocGenerics rappdirs RCurl RSQLite]; }; - Uniquorn = derive2 { name="Uniquorn"; version="2.2.1"; sha256="0wh57344icpd84l4gj7lz2n75mhpw6ywsir7zj4ky83p30x066sr"; depends=[data_table doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; }; - VanillaICE = derive2 { name="VanillaICE"; version="1.44.0"; sha256="0v4bqcwbbzabmq1pcs55j3jlhqssr2jsr9hxh76p1n7d6fw4dgs6"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; - VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.28.13"; sha256="1a7b0bg579ynpbfh5dk87fdgl62r9cwk4zmrl61m6zil7881p3gh"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; - VariantFiltering = derive2 { name="VariantFiltering"; version="1.18.0"; sha256="13z1x1v9xbdzsfn9x66b6sd18pla98cwd5zvxkwaiph8rp8bgvic"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; }; - VariantTools = derive2 { name="VariantTools"; version="1.24.0"; sha256="1ml3pl7xnxvzr6zkypr80xzw6nffswk29gzxycn42473sc4ixn7j"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - Vega = derive2 { name="Vega"; version="1.30.0"; sha256="035f2ly3y5i4cirwvfham5kpyawg9scfvfvyn7ys4lyjxx59y4dd"; depends=[]; }; - VegaMC = derive2 { name="VegaMC"; version="3.20.0"; sha256="0cgvfmwxrprrzgp0fxhi944y1z83h4mjv89iax2bshpwp1q5d9xr"; depends=[Biobase biomaRt genoset]; }; - Wrench = derive2 { name="Wrench"; version="1.0.0"; sha256="12gfdj2p52pah67bimz14xcwmcb4c2snjwswj0fns7v3v1h9rlqg"; depends=[limma locfit matrixStats]; }; - XBSeq = derive2 { name="XBSeq"; version="1.14.1"; sha256="0na0jiqfy40bzl243gqc2214k4hibv6v4ndiqwq0c5f78cyr6lph"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; - XDE = derive2 { name="XDE"; version="2.28.0"; sha256="034474qsc065z85wjlr8g695cpknh9kwbhzqdkh8fab2j06249sr"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools MergeMaid mvtnorm RColorBrewer siggenes]; }; - XINA = derive2 { name="XINA"; version="1.0.1"; sha256="0gwgcvipr014w96ds13kf3gap3fkvyq0vamdfds3nacd9h1hgmbp"; depends=[alluvial Biobase ggplot2 gridExtra igraph mclust plyr STRINGdb]; }; - XVector = derive2 { name="XVector"; version="0.22.0"; sha256="01fph1ydd6g0rl5mcw54spx22glq2kqv7wyw8bqw0plmabzcwwdm"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; - YAPSA = derive2 { name="YAPSA"; version="1.8.0"; sha256="1agacimdd1m5yja2xbcsb83mns4svpxbjcsfrvm9ydqdj737i10j"; depends=[circlize ComplexHeatmap corrplot dendextend GenomeInfoDb GenomicRanges GetoptLong ggplot2 gridExtra gtrellis KEGGREST lsei PMCMR reshape2 SomaticSignatures VariantAnnotation]; }; - a4 = derive2 { name="a4"; version="1.30.0"; sha256="1iqjy35rqx3m2y0dm2bk4cnzdm1qvbi608bfmrid88w6wmwz3qlk"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; - a4Base = derive2 { name="a4Base"; version="1.30.0"; sha256="0k9k3bv99msbwf2y416cz316ssaha2dxvmaddbl7z9037p8mjr70"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; }; - a4Classif = derive2 { name="a4Classif"; version="1.30.0"; sha256="02l77a59865ly3bydv74ff2l2wfb0x5s283g1nx6g1qrw3ly982j"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; }; - a4Core = derive2 { name="a4Core"; version="1.30.0"; sha256="1d62afxkfp9zbp59ijcn4wd1gdynygw013av41wq8bfm3cx6f9zr"; depends=[Biobase glmnet]; }; - a4Preproc = derive2 { name="a4Preproc"; version="1.30.0"; sha256="1dd3fqcc7nr2zbi46k0mnqkh42mfxk894ixfpqg7i9np2523p5gp"; depends=[AnnotationDbi]; }; - a4Reporting = derive2 { name="a4Reporting"; version="1.30.0"; sha256="124774z3bfdjgxx2ad40795h92aam21yfx0rw0n01nk2wf6k7xc4"; depends=[annaffy xtable]; }; - aCGH = derive2 { name="aCGH"; version="1.60.0"; sha256="0bmcw2pf4g584vjzagi70bxfasgzbi7nbis638aa5aymqgssclh8"; depends=[Biobase cluster multtest survival]; }; - abseqR = derive2 { name="abseqR"; version="1.0.0"; sha256="0w0ngxnilcrxlixsz7ls3zm99gyabxwn7w1r3r45n96d4aj075ry"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; }; - acde = derive2 { name="acde"; version="1.12.0"; sha256="1qlas1fkjwx3x7ylhx4xwgwd3xyyijgsaqprfz3zk32cym67igx2"; depends=[boot]; }; - adSplit = derive2 { name="adSplit"; version="1.52.0"; sha256="0q5h0gizdxmpaz946ynzh1kbx51yd98z23y21bh7a3m2cqhr63gi"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; - adaptest = derive2 { name="adaptest"; version="1.2.0"; sha256="1ibrzga0jk5rs6a097gn5ar7hkz8zja54l35xznp72jaradprj2i"; depends=[calibrate origami SummarizedExperiment tmle]; }; - affxparser = derive2 { name="affxparser"; version="1.54.0"; sha256="0cfsab3jih4zbrzfpd2cgi4wry2xmp8hmchpp70z33x0shwcxddx"; depends=[]; }; - affy = derive2 { name="affy"; version="1.60.0"; sha256="0x8h4fk2igv7vykqfvf6v9whmx3344v5rf3gyfajd431xkjldz6k"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; }; - affyContam = derive2 { name="affyContam"; version="1.40.0"; sha256="1qday3swgrgziymmwl2iyz2f8kd610hgpj9i9dsv8x09nks0jxcm"; depends=[affy affydata Biobase]; }; - affyILM = derive2 { name="affyILM"; version="1.34.0"; sha256="1v5spxwfg5vbca6rh2d3zsnsz1rlji02wfxq45pljwqcjr7pk6zy"; depends=[affxparser affy Biobase gcrma]; }; - affyPLM = derive2 { name="affyPLM"; version="1.58.0"; sha256="0n827mshllqj867w137x8qly992rvls9wcygmr09gmpy8f5hr0d2"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; - affyPara = derive2 { name="affyPara"; version="1.42.0"; sha256="0jk2r1v3yq1p9ny9hj46w42aq34m00bfm62a2n38cvql4zjrp6wz"; depends=[affy affyio aplpack snow vsn]; }; - affyQCReport = derive2 { name="affyQCReport"; version="1.60.0"; sha256="0l9znngszbjdwyyc1kpjszy3mrmwx781ww3wq8hs19jwvczgscyc"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; - affycomp = derive2 { name="affycomp"; version="1.58.0"; sha256="1hkaa0g6kzmsnhd5vq8qy856rj7l5hcknhl62j47pqvwigfb1adg"; depends=[Biobase]; }; - affycoretools = derive2 { name="affycoretools"; version="1.54.0"; sha256="022pmik9gxpc0j3fcb2gmi8vchjwg3pwp1yn0cg5qfhy4w8mbyzz"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; - affyio = derive2 { name="affyio"; version="1.52.0"; sha256="1s4zp1211vf0krxzch9v3q3r6vs8hihqppq18i2fpvwlknfja7c1"; depends=[zlibbioc]; }; - affylmGUI = derive2 { name="affylmGUI"; version="1.56.0"; sha256="1hpr812jys2d265r6007bh2p1d6hay25dg7ia39xwcycmwjfn9xq"; depends=[affy affyio affyPLM BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; }; - affypdnn = derive2 { name="affypdnn"; version="1.56.0"; sha256="0v8913xw30xf42pvql9m4wk5sqnrvydhn1a13amk7prfr2hhjnjr"; depends=[affy]; }; - agilp = derive2 { name="agilp"; version="3.14.0"; sha256="0jqgd582b9p3dclfs0ps4agj64vxmvqp9a2a9bw12dywschhngq3"; depends=[]; }; - alpine = derive2 { name="alpine"; version="1.8.0"; sha256="1ijh1lxl6w7raw2lvzxf20jx8x20d8p9mci62q3fpkc35i8312m6"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; - alsace = derive2 { name="alsace"; version="1.18.0"; sha256="1946iwghbsy0dcdpx7wl284prg5xikr0s7aj8pvv7gcmah8i9i7n"; depends=[ALS ptw]; }; - altcdfenvs = derive2 { name="altcdfenvs"; version="2.44.0"; sha256="1fkly7m4fgah6v7a6fglxqzik2562q6hg6ffq89kbgnzgvab4xsi"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; - ampliQueso = derive2 { name="ampliQueso"; version="1.20.0"; sha256="1dwphzsl45g537ic1m2bbg80dcilvhg1w8c02zlsxlihhid5rwy7"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; }; - amplican = derive2 { name="amplican"; version="1.4.1"; sha256="0wshidpdg3pqzmwshq5ics38gfmrwfqm803y83ynd7b0k9fch07h"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggforce ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats rmarkdown S4Vectors ShortRead stringr waffle]; }; - anamiR = derive2 { name="anamiR"; version="1.10.0"; sha256="0yk56vkibnbfwlnixh5r4a9iw9pnmavl7lv4p0jdmv2wnx85gzgz"; depends=[agricolae DBI DESeq2 gage gplots limma lumi RMySQL S4Vectors SummarizedExperiment]; }; - annaffy = derive2 { name="annaffy"; version="1.54.0"; sha256="16c6allp4vlx0g3nffanrm0mkkf8s2n31dccw4bflnx2pr81bmd5"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; - annmap = derive2 { name="annmap"; version="1.24.0"; sha256="12047l7sc3ayvicqnlxc424kbvbiiz1nn4rczd1n50b8kzc25fjs"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; - annotate = derive2 { name="annotate"; version="1.60.1"; sha256="0pk6ayr3vyqxk850ljkbyil4i382ngfqcbxlv0qrp62yfqgzcjwp"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; - annotationTools = derive2 { name="annotationTools"; version="1.56.0"; sha256="0hqy0mq6pkn05p2dv4pw24p697yvikhdn351adf2ynldy6f3sl9z"; depends=[Biobase]; }; - annotatr = derive2 { name="annotatr"; version="1.8.0"; sha256="1rknhlndn9fxa68dbkqjphiv50xqp28vf1259k5w7vlm75vvdkdv"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; }; - anota = derive2 { name="anota"; version="1.30.0"; sha256="182fp6dpws516y0igvwn6936higfqvy25haa0xs273f8aczr9cf0"; depends=[multtest qvalue]; }; - anota2seq = derive2 { name="anota2seq"; version="1.4.2"; sha256="1x2l9c50j8pi8xk85pp4chvfb865zwj4ppaj02bi2lsjgqyda6wm"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; - antiProfiles = derive2 { name="antiProfiles"; version="1.22.0"; sha256="1div92hqrri8c0y5g37cc4ysi30gcklf82n6g0p98xwv54ks2y7j"; depends=[locfit matrixStats]; }; - apComplex = derive2 { name="apComplex"; version="2.48.1"; sha256="01vzk1blgwn0zqdgzhr19haa0ixd78gphxrhjab27n9g8s60i3jg"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; - apeglm = derive2 { name="apeglm"; version="1.4.2"; sha256="13yhm14cxw2gmckh7sjr1yy8q2x1wggmnbj2qp6zd7raq4l48qrb"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; }; - appreci8R = derive2 { name="appreci8R"; version="1.0.0"; sha256="1ajk6q40dr5il19ffnsfglbh1rfn8ylwv08mw9wfpvc26x4znwak"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ESP6500SI_V2_SSA137_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_0_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools rsnps S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; }; - aroma_light = derive2 { name="aroma.light"; version="3.12.0"; sha256="0vfifgpqxjjncbiv6gvlk9jmj14j90r9f30bqk3ks9v1csjnjhrb"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; - arrayMvout = derive2 { name="arrayMvout"; version="1.40.0"; sha256="1m3n2pqm40wsq7x7acspcq268608pnx58mndqfcbv813685b70p5"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; - arrayQuality = derive2 { name="arrayQuality"; version="1.60.0"; sha256="0fbvlilz111ahlm50gmwwjydpasbplr0lpj3dz9apawi0jff4f4a"; depends=[gridBase hexbin limma marray RColorBrewer]; }; - arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.38.0"; sha256="0xhzz9ixc5mp49cwpi4smdgdc3mrf1ppzhx8dpjahq1f7r3xnbb5"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; }; - artMS = derive2 { name="artMS"; version="1.0.12"; sha256="0px37blc5qhqwd7azgji67x74sh3y34aqr57g41sbaj1x0rh84bs"; depends=[AnnotationDbi biomaRt bit64 circlize cluster ComplexHeatmap corrplot data_table dplyr factoextra FactoMineR getopt ggdendro ggplot2 ggrepel gplots gProfileR limma MSstats openxlsx org_Hs_eg_db org_Mm_eg_db PerformanceAnalytics pheatmap plotly plyr RColorBrewer reshape2 seqinr stringr tidyr UpSetR VennDiagram yaml]; }; - attract = derive2 { name="attract"; version="1.34.1"; sha256="1370w8qvmiv8r48hk29mlh53xs5a78qpz6pbax7fq7q9xip7fbs0"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; - bacon = derive2 { name="bacon"; version="1.10.1"; sha256="1pd3p1cfggiy08458vplsy3s1zm5jqqcwrv4fks8ra2kf97j38df"; depends=[BiocParallel ellipse ggplot2]; }; - ballgown = derive2 { name="ballgown"; version="2.14.1"; sha256="073jyv98s05cxx8n83c20chh0k1sbw8rndldcdfq3habahllf8si"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; - bamsignals = derive2 { name="bamsignals"; version="1.14.0"; sha256="19irfx1y1izf903vq59wxsdbf88g143zy9l89gxqawh7jfxds8w8"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; - banocc = derive2 { name="banocc"; version="1.6.1"; sha256="18n273xwc49mr3d7b83nxqivyr5zzgcbv6kajq8ha641f34nasw1"; depends=[coda mvtnorm rstan stringr]; }; - basecallQC = derive2 { name="basecallQC"; version="1.6.0"; sha256="0l2w55lc8aknj3ivma3arp96j46hcfzw20k9js3dgx8k3sgalxmn"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; }; - bayNorm = derive2 { name="bayNorm"; version="1.0.9"; sha256="1jm06y6mv85hpjmn9qqikm3i2x6afzhkcby75r7k9dqg6an5zgra"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; }; - baySeq = derive2 { name="baySeq"; version="2.16.0"; sha256="0f6yckihm5cwh3dycv2g54hf7nddhcqya4yrqwbir96y5k1d1km5"; depends=[abind edgeR GenomicRanges]; }; - bcSeq = derive2 { name="bcSeq"; version="1.4.1"; sha256="0izmzb341h85ixxdriiavwjjpw96r2pd2y9kwx9zi2rrbxa6wakf"; depends=[Biostrings Matrix Rcpp]; }; - beachmat = derive2 { name="beachmat"; version="1.4.0"; sha256="07zgmms0qg8gw7x0js46965bbhpfj2aa1h5ixdz9r332bxv9cdmr"; depends=[BiocGenerics DelayedArray HDF5Array Rcpp rhdf5 Rhdf5lib]; }; - beadarray = derive2 { name="beadarray"; version="2.32.0"; sha256="0xy75h98xkclsi2hxzz8qj21sm8fp3cy7ikmjsryvdbk7jwl6lgg"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; }; - beadarraySNP = derive2 { name="beadarraySNP"; version="1.48.0"; sha256="1s1k5q1mczbnx5gdxa8r1igkmc8jw5dmnp0gl00q862bbsljplk9"; depends=[Biobase quantsmooth]; }; - bgafun = derive2 { name="bgafun"; version="1.44.0"; sha256="1sp3w0g0sxs6g42mjj76sjpi5ybcvhg6a4sp617713a71dab7276"; depends=[ade4 made4 seqinr]; }; - bgx = derive2 { name="bgx"; version="1.48.1"; sha256="0ygqbqpbrp4hy5dp4g7nn7zrfar855a7bp16dxcv7646vp3yrzk4"; depends=[affy Biobase gcrma Rcpp]; }; - bigmelon = derive2 { name="bigmelon"; version="1.8.0"; sha256="1wc5n5cq05a7qv0b46ywbgg1fbz0s8hyf83g861dxw8jhhmnm717"; depends=[Biobase BiocGenerics gdsfmt GEOquery methylumi minfi wateRmelon]; }; - bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.30.0"; sha256="0pzqchv9namv73nm2vr6wjny7ghja8bs73s7xp4ixyfg4d1i9h06"; depends=[bigmemory]; }; - bioCancer = derive2 { name="bioCancer"; version="1.10.11"; sha256="0v55y3scj9qmiqjvqm4caj3ccchfv1dzmbc5jxgdb39vw1hjqsc2"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; - bioDist = derive2 { name="bioDist"; version="1.54.0"; sha256="1pl6z8yx1pns19y924x79ky4vqx180hifvy7n4mdhv6mjvhjkijl"; depends=[Biobase KernSmooth]; }; - bioassayR = derive2 { name="bioassayR"; version="1.20.1"; sha256="1zf1ykmn3wq6jxb6k1v00qna5wjlh4yy7x35x2k6zqgn7df4607z"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; - biobroom = derive2 { name="biobroom"; version="1.14.0"; sha256="1xfqa666n8h65y277a1g56r1z76x9fn0dnj45cqgx3ddaz0v1nil"; depends=[Biobase broom dplyr tidyr]; }; - biocGraph = derive2 { name="biocGraph"; version="1.44.0"; sha256="0nq8wvssikkcrs3vffpy3pj79iydm44ffsx67q38kg51gc4ykipk"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; - biocViews = derive2 { name="biocViews"; version="1.50.10"; sha256="06ms82pyc5rxbd9crfvqjxcwpafv0c627i83v80d12925mrc51h8"; depends=[Biobase graph RBGL RCurl RUnit XML]; }; - biomaRt = derive2 { name="biomaRt"; version="2.38.0"; sha256="1lshkknp7dmr3p6dd2zbv86cc71h53ggh9ji83jcjym8sgbbspl2"; depends=[AnnotationDbi httr progress RCurl stringr XML]; }; - biomformat = derive2 { name="biomformat"; version="1.10.1"; sha256="1a4fhqmvabdpldybhjli5dpnd68qraccvd1f2zf7z2d1s17c9pgq"; depends=[jsonlite Matrix plyr rhdf5]; }; - biomvRCNS = derive2 { name="biomvRCNS"; version="1.22.0"; sha256="0bzi8b4g1ki8gslkb2nkrl4fyrl5lj9qipq8lmr6zj924y3pkmnm"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; - biosigner = derive2 { name="biosigner"; version="1.10.0"; sha256="04mny1lrgmwd1yy07qhim286xvm34802f12rbpsplb0xzwg09y6i"; depends=[Biobase e1071 randomForest ropls]; }; - biosvd = derive2 { name="biosvd"; version="2.18.0"; sha256="1ngmnk4xakpf451lbx9libxwlsqz7xffaj53awkw5iakzmj7szb9"; depends=[Biobase BiocGenerics NMF]; }; - biotmle = derive2 { name="biotmle"; version="1.6.0"; sha256="0vmff5xpcprx1x45fbbm9bx3wygg6r2zb7z9mnkjjshsinf7wwwb"; depends=[BiocGenerics BiocParallel doFuture dplyr future ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tmle]; }; - biovizBase = derive2 { name="biovizBase"; version="1.30.1"; sha256="0v5gvcx180qn5487i1dph9abadw3ggqwp5yzy41jswzbdc8q6sbm"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - birta = derive2 { name="birta"; version="1.26.0"; sha256="10k6r3g92ksm90gj8z04vs1psgrr1p0yddrjl5zcwrccczcankpb"; depends=[Biobase limma MASS]; }; - birte = derive2 { name="birte"; version="1.18.0"; sha256="036grna913y55qz72npwq6k27wcvaf7swy3y9nrfh0wg327w4y9a"; depends=[Biobase glmnet limma MASS nem Rcpp RcppArmadillo]; }; - blima = derive2 { name="blima"; version="1.16.0"; sha256="1719skygq6mizvr67klja0z1xqbmfhxgjyi90i9p95sbb6mr1n74"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; - bnbc = derive2 { name="bnbc"; version="1.4.0"; sha256="001m8nal3l1ya5w1f9gh7sgvdli9lv0v8ylkdgmdwjy2wrpkqiij"; depends=[BiocGenerics EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp S4Vectors SummarizedExperiment sva]; }; - brainImageR = derive2 { name="brainImageR"; version="1.0.0"; sha256="1j5axlx12dpl6y58djqbf6dg146zz94ki43nhi9rjl03aw9bg9fc"; depends=[BiocGenerics ExperimentHub ggplot2 gridExtra randomForest RColorBrewer testthat]; }; - branchpointer = derive2 { name="branchpointer"; version="1.8.0"; sha256="1fgfaf7i9f1rr34p38b87wq5qys7r8wqi99xw4yk154bhsahkdlm"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; }; - breakpointR = derive2 { name="breakpointR"; version="1.0.0"; sha256="19hpwdpj5mqidy0m5q0ilx3p84ry0ym31g2ld3cnihzi2kxcyqzm"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; }; - bridge = derive2 { name="bridge"; version="1.46.0"; sha256="0fsf8qcl4p63fgzyk9zsr25krz1a34mi79mnxya0n4fxrf3qcq2f"; depends=[rama]; }; - bsseq = derive2 { name="bsseq"; version="1.18.0"; sha256="0r0l4fwaq09n14bvqy01id569zimxwafs3xnp0zn2089512igis7"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp rhdf5 Rhdf5lib S4Vectors scales SummarizedExperiment]; }; - bumphunter = derive2 { name="bumphunter"; version="1.24.5"; sha256="1f9vk3srffbx8jpza40nd18a4y0p0z8q40mx55dlcnddkwrqi19b"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; - cTRAP = derive2 { name="cTRAP"; version="1.0.3"; sha256="14rfnqmp2mgnkyhgyvlplv4alnwm909pw586n7nc53r82ph4m0f0"; depends=[cowplot data_table fgsea ggplot2 httr limma pbapply piano plyr R_utils readr rhdf5]; }; - caOmicsV = derive2 { name="caOmicsV"; version="1.12.1"; sha256="1nqa1f5dbx11lfripaz2l7pkymcgi5vbiglhhk0kz4n0p5p1pjz3"; depends=[bc3net igraph]; }; - canceR = derive2 { name="canceR"; version="1.16.02"; sha256="1fzhd2mppzs3jkysyqg6brg62d6afxl2cm6dhnyz1sjp2951bvsv"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; - cancerclass = derive2 { name="cancerclass"; version="1.26.0"; sha256="1fsfxi95iyb2bhy64xdja4231bfs9byzzvdpsf6abd8myqaflcpx"; depends=[binom Biobase]; }; - casper = derive2 { name="casper"; version="2.16.1"; sha256="1wr7l1lri00g3fxafhjkj82y3nlh488x9ayjf4x3bcyv20d0lc2a"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; - categoryCompare = derive2 { name="categoryCompare"; version="1.26.0"; sha256="1kb4b833wn5qf3d6vic0jf0p0h6dhgcpjnxnqd6b4bhva0y3jcfd"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; - cbaf = derive2 { name="cbaf"; version="1.4.1"; sha256="04qspghxibf05fjx8sbqq8kxhx0y0lh8v5mv4lzzy13bhms9nfsk"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; }; - ccfindR = derive2 { name="ccfindR"; version="1.2.1"; sha256="0gcbqjlb4jpxw2rswwgld5nazzzsphh8kdaqpjhn96qslkfxqlrw"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; }; - ccmap = derive2 { name="ccmap"; version="1.8.0"; sha256="1vkkm455nhhg123jwl2kv3gdf3mvw5zab4whym0vh33rm499hrks"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; }; - ccrepe = derive2 { name="ccrepe"; version="1.18.1"; sha256="10c6mypr2q3j420bvldl59h1y58i8l06piwqr1ji80z6r6xk96vx"; depends=[infotheo]; }; - celaref = derive2 { name="celaref"; version="1.0.1"; sha256="0sb1mg2ql09jf7hc5kszh3h9cajma0pdwzf8f58pridwhafw5z0p"; depends=[BiocGenerics dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; }; - cellGrowth = derive2 { name="cellGrowth"; version="1.26.1"; sha256="0zmn45i6shr2d6q2dg2p2raz38cy6k8363maq4r4648fx2bmvkb2"; depends=[lattice locfit]; }; - cellHTS2 = derive2 { name="cellHTS2"; version="2.46.1"; sha256="1fj1gshgphbbqhywwzvm3xrw8zfp19dc8fi6kbzv20ikf3am9fml"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; - cellTree = derive2 { name="cellTree"; version="1.12.1"; sha256="1qr68f39bqykvjbjp5bw71g41wfp369yc88dqz9wppkzi16vl6z0"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; - cellbaseR = derive2 { name="cellbaseR"; version="1.6.1"; sha256="0052wvb6jijs1v8yv1z049n6cy4qcjbrv20gqbsgl14xj0mif26x"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; }; - cellity = derive2 { name="cellity"; version="1.10.1"; sha256="1ifm50ff9q6lwxyi52qzksimnwvd8yddrp7jkidzlykamh5dg05p"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; - cellscape = derive2 { name="cellscape"; version="1.6.0"; sha256="062x43n5jq8hwlrlgd1ffgbpnifac79j9dzd35f6phb6vc1g63dl"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; - cghMCR = derive2 { name="cghMCR"; version="1.40.0"; sha256="0h2adfwa6afjik7zi6kn8i7gqbn7x2r7rh8kvi8v8c8y08166d3a"; depends=[BiocGenerics CNTools DNAcopy limma]; }; - charm = derive2 { name="charm"; version="2.28.0"; sha256="1shf9f9b0dl5fskify0lqnqnr9rk4hk5rnrx7b028m83zphizxs8"; depends=[Biobase Biostrings BSgenome ff fields genefilter gtools IRanges limma nor1mix oligo oligoClasses preprocessCore RColorBrewer siggenes SQN sva]; }; - chimera = derive2 { name="chimera"; version="1.24.0"; sha256="1zkwf6zbg1151br9kafbqs4k4d5h70lbzjgy4x3q5pj3iqwg6j8p"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - chimeraviz = derive2 { name="chimeraviz"; version="1.8.5"; sha256="0hh1a68g0m8i9iqhmy6r9m7j1diaraj3qryk7lzjr2l97d6q4d8j"; depends=[AnnotationDbi AnnotationFilter ArgumentCheck BiocStyle Biostrings data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph gtools Gviz IRanges org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; }; - chipenrich = derive2 { name="chipenrich"; version="2.6.1"; sha256="0nm55lfac405spccl9f19p5ij8mdaj6lm7qmaf4xqagsaf5x0pa9"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; - chipseq = derive2 { name="chipseq"; version="1.32.0"; sha256="1pp1rm5fs3hlar5x4dl3a3b4gara7qwf81dbvka6r1n78hrf9x1b"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; - chopsticks = derive2 { name="chopsticks"; version="1.48.0"; sha256="0r52z0hjaxinw11jzg8cyhdpg2g1027vd5aiijwi6bmipdzw4sfk"; depends=[survival]; }; - chroGPS = derive2 { name="chroGPS"; version="2.0.1"; sha256="1bn5s1r927ifhwqifws0wgs7v15fk8922kbm8qdkg5zaqibj5qx7"; depends=[Biobase changepoint cluster ellipse GenomicRanges ICSNP IRanges MASS vegan]; }; - chromDraw = derive2 { name="chromDraw"; version="2.12.0"; sha256="0qqam9vklg2cwsvcp9fm3l3c4lmjzf2lnxrv5dci16f8q55z88cl"; depends=[GenomicRanges Rcpp]; }; - chromPlot = derive2 { name="chromPlot"; version="1.10.0"; sha256="15f7wmak0rp0bfzqsjmz6i8zk5g4axsgk7034qg4jw9hlp0nkd6v"; depends=[biomaRt GenomicRanges]; }; - chromVAR = derive2 { name="chromVAR"; version="1.4.1"; sha256="16q9pmjlaqc7nvaxg9arfsrrnpcyzvz0gb5zq7l3g2jgjp4pfi30"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; - chromstaR = derive2 { name="chromstaR"; version="1.8.1"; sha256="0ad8q80r7c2bh4a4qy0n82n0ln6fpwwmabcicpdqlvaiahdnp9ph"; depends=[bamsignals chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; - chromswitch = derive2 { name="chromswitch"; version="1.4.1"; sha256="12c9p8val2hfz41kcgph0ms2vfb8dvh754c5z70kyy4wg9n4d28s"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; }; - cicero = derive2 { name="cicero"; version="1.0.15"; sha256="0awxl47rk6f15x8qb70azjs80fsfd8c78bvr4hgc3dmiyik5frs2"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringr tibble VGAM]; }; - cisPath = derive2 { name="cisPath"; version="1.22.0"; sha256="07ym4ma35vngdbv8fdqf755kiafgrn02bizn77pfkzvrf7xsz5c7"; depends=[]; }; - cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.20.1"; sha256="0fy0bbj2d40532z7a019whf3g7092pj7ypg5p7byimcc2h9ybbh7"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; }; - cleaver = derive2 { name="cleaver"; version="1.20.0"; sha256="0b00a5n87hcssnra9j0qfsq260a83g9p35rnhpg8ywv3kk6z85cc"; depends=[Biostrings IRanges S4Vectors]; }; - clippda = derive2 { name="clippda"; version="1.32.0"; sha256="18jcpcwzf89a29i7qlja4nx9dn8n2r14kpjfl9sy2riaf0v9cmqq"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; - clipper = derive2 { name="clipper"; version="1.22.0"; sha256="1gihz3dzii0bf048zbna4yj0fcs8pnhyacpmvyapi70iin03nwng"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; - clonotypeR = derive2 { name="clonotypeR"; version="1.20.0"; sha256="03k94s5j47mh7hw8m12q7lsyszmf5kpmlc7xsvwbnnazsk15h55v"; depends=[]; }; - clst = derive2 { name="clst"; version="1.30.0"; sha256="1jakdp6ca14n8zc3njwkqibsir6as2nipjsxkanss5rn7s6xvql9"; depends=[lattice ROC]; }; - clstutils = derive2 { name="clstutils"; version="1.30.0"; sha256="0igvcd1dk8njp8fmf8clnx1hjzsbpf6xr7n31qzynzqghdr52660"; depends=[ape clst lattice rjson RSQLite]; }; - clustComp = derive2 { name="clustComp"; version="1.10.0"; sha256="17d86fzadlmv45bxwdnjaw5bcr46zn73y4wqw5xw5rvaawrdc73v"; depends=[sm]; }; - clusterExperiment = derive2 { name="clusterExperiment"; version="2.2.0"; sha256="0r8x21z0clgjbxxdr3iqfmg0nw2pwdidyc41pnbzw9y40lzad4lv"; depends=[ape BiocGenerics cluster DelayedArray dendextend edgeR HDF5Array howmany kernlab limma locfdr matrixStats NMF phylobase RColorBrewer Rcpp RSpectra S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; }; - clusterProfiler = derive2 { name="clusterProfiler"; version="3.10.1"; sha256="1v4fh8ll7zk8yhbaa0nq9xvqrb05kyvbpwkqpnjf07s873805rxm"; depends=[AnnotationDbi DOSE enrichplot ggplot2 GO_db GOSemSim magrittr plyr qvalue rvcheck tidyr]; }; - clusterSeq = derive2 { name="clusterSeq"; version="1.6.0"; sha256="0zq0pah3qk4j5grsj3dyc62n222gacjlhr2xw7frwrrbjlxza7b2"; depends=[baySeq BiocGenerics BiocParallel]; }; - clusterStab = derive2 { name="clusterStab"; version="1.54.0"; sha256="0irwzgayssdnz76k13zf27h9s74x8idi26zfsdd2c3av494d3yl9"; depends=[Biobase]; }; - cn_farms = derive2 { name="cn.farms"; version="1.30.0"; sha256="1lmlixab15xq12dxw04yyxd1p65irwhxkgkxsgvw28f922bkmlsg"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; - cn_mops = derive2 { name="cn.mops"; version="1.28.0"; sha256="14rrvyfyzva1hpdgsn1df6m4q14mc3zdn1lng6klzrni3ifsidjm"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; - cnvGSA = derive2 { name="cnvGSA"; version="1.26.0"; sha256="02p4ba2vy75qfp3nlfvm0dmmihi1k1fbcl6ckxlr5hgimm1q034i"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; - coGPS = derive2 { name="coGPS"; version="1.26.0"; sha256="0jsbgx6xdasqii9wcfn4ilf2dfc790lzzby1bhpzlq94nwlr896h"; depends=[]; }; - coMET = derive2 { name="coMET"; version="1.14.0"; sha256="09r81ag9ix4jh3zvwyzym9g7rc7vkyhagcv934r8i4fzzvpiqsz4"; depends=[biomaRt colortools corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; }; - coRdon = derive2 { name="coRdon"; version="1.0.3"; sha256="1v4zvzff4r54wjgp48l5vazvfy8w0gvvqxxhajm35p6d2bbpfsvd"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr stringr]; }; - cobindR = derive2 { name="cobindR"; version="1.20.0"; sha256="1bkwjj825srwm3rn3j88p1q35x03f129ca1hk919nnf92psh47nc"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; }; - codelink = derive2 { name="codelink"; version="1.50.0"; sha256="1nfnb9iz8j31ia9979mjvs9gzdbh9zwfy14qxvjrp3dv8d1gf2rx"; depends=[annotate Biobase BiocGenerics limma]; }; - coexnet = derive2 { name="coexnet"; version="1.4.0"; sha256="0751781vsr46xs3dpq2n29li1zipzad9qv6xnfdm34v62yaggy94"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; }; - cogena = derive2 { name="cogena"; version="1.16.0"; sha256="12r86h6fzr6wqvf70jjxf02zm72ks577m6qcv60wiss609c0b0dn"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; }; - compEpiTools = derive2 { name="compEpiTools"; version="1.16.0"; sha256="02ygqf2h9bm8vfqjfw0xzd75brcazf1dmhq95l8xqc3gy77cffr6"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; - compartmap = derive2 { name="compartmap"; version="1.0.3"; sha256="0p7ww7wgfnnankkjlq9jgqqcw9l9k0k2ynzmgxdqsyndpi9ghmgr"; depends=[GenomicRanges gtools Homo_sapiens minfi mixOmics SummarizedExperiment]; }; - compcodeR = derive2 { name="compcodeR"; version="1.18.1"; sha256="0833zar5zpgns3rlr6nsfagd1ypp62c2779kzajvsrjm61406mrs"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; - condcomp = derive2 { name="condcomp"; version="1.0.1"; sha256="1drp9zicf29alh8cq093ns7asl67zhb12mbi0cjd3n1z4i19919j"; depends=[cluster ggplot2 ggrepel outliers]; }; - consensus = derive2 { name="consensus"; version="1.0.3"; sha256="0lylnis33dbnd6vxp3g4pvn1cvzslpy6j2y1j31bw5an1i5lg4l2"; depends=[gplots matrixStats RColorBrewer]; }; - consensusDE = derive2 { name="consensusDE"; version="1.0.6"; sha256="1wakskzc6bcq0a8inacsd062z5sgaqkk8317pa2jdn8kyfqxgq9z"; depends=[airway AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings dendextend DESeq2 EDASeq edgeR GenomicAlignments GenomicFeatures limma pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; }; - consensusOV = derive2 { name="consensusOV"; version="1.4.1"; sha256="0bqqbk2mcj1q5bpyv5gykxpjf3c1gszm5irbdhp1hnkvpy5rxdyw"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; }; - consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.10.0"; sha256="1rww42z71x6d7ckjdm6xa4cvvqazbwghq6na3srq5aarp6pyh34w"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; - contiBAIT = derive2 { name="contiBAIT"; version="1.10.1"; sha256="0wf8s1v8kz69s351xy4c9ji6k1k9xg568lg0b525s4q9wdh87xrl"; depends=[BH BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; - conumee = derive2 { name="conumee"; version="1.16.0"; sha256="095kzjzvwz5l452arkvrmag7mvqsip14xzbnsfk7wzlr5vpk2765"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; - convert = derive2 { name="convert"; version="1.58.0"; sha256="1z7f4dxlsgknapvwq7dvkhyaq25ns2i53fp085j5yy89aqv12w12"; depends=[Biobase limma marray]; }; - copa = derive2 { name="copa"; version="1.50.0"; sha256="0cl9i2pi0ap9nvhqldsll9vg7k5qlzr0691mp4i7r6qib31xnzpx"; depends=[Biobase]; }; - copynumber = derive2 { name="copynumber"; version="1.22.0"; sha256="0ipwj9i5p1bwhg5d80jdjagm02krpj2v0j47qdgw41h8wncdyal3"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; - coseq = derive2 { name="coseq"; version="1.6.1"; sha256="03qphm9bq7x4h4n970hd0bpi9sqvjdmg5cmlkzfqwpnbd4njlp0m"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; - cosmiq = derive2 { name="cosmiq"; version="1.16.1"; sha256="1lk0778j7famza72h8ppmx4pxnkmm6m6vddz0rw7fbnh3af8j9p2"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; - countsimQC = derive2 { name="countsimQC"; version="1.0.1"; sha256="115b806867fnznxdgr786vp7gd536xyz4x94v2s2wpaxwyf65jgs"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 randtests rmarkdown SummarizedExperiment tidyr]; }; - covEB = derive2 { name="covEB"; version="1.8.1"; sha256="197i9lmmq9xj4f9xxf1050blz5ap6nqbkhfpn19594fc88g09dxa"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; }; - covRNA = derive2 { name="covRNA"; version="1.8.0"; sha256="152yhnq13303wkb4p1bqal7qrg2gxwfqsdpgn84m2sz8gm43dxkc"; depends=[ade4 Biobase genefilter]; }; - cpvSNP = derive2 { name="cpvSNP"; version="1.14.0"; sha256="0g4b4i001z5s5g570cpay61c8b8274cy35gp09mb3hjmg5r6rcxp"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; - cqn = derive2 { name="cqn"; version="1.28.1"; sha256="062887yp5kalz8zv648a19gh1j5v26hbrv6005416r6z83rwj91q"; depends=[mclust nor1mix preprocessCore quantreg]; }; - crisprseekplus = derive2 { name="crisprseekplus"; version="1.8.0"; sha256="125fnm1mrx38bb2c6inw5c45ckh8ryapjvxx7227jj86a3hcljk7"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; - crlmm = derive2 { name="crlmm"; version="1.40.0"; sha256="1j37ff0pp782isnrzfaw0cac8nxcz09yc4z7xgss78ah3af26nwj"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; }; - crossmeta = derive2 { name="crossmeta"; version="1.8.0"; sha256="01d8vx016bw4qm3c6pwws1g3s2v7xppsj2v9gzdzwazpk4sfyikk"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager ccmap data_table doParallel doRNG DT fdrtool foreach GEOquery ggplot2 limma matrixStats metaMA metap miniUI oligo pander plotly RColorBrewer rdrop2 reshape shiny stringr sva]; }; - csaw = derive2 { name="csaw"; version="1.16.1"; sha256="0rbmsikhj60np22j84gxinr354b2i892nqic493jhzziiznl51sl"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; - ctc = derive2 { name="ctc"; version="1.56.0"; sha256="0yp7c0abk48jx1wf8n1gawh7dm15idahqc8va24v8cm0bzxgnmh2"; depends=[amap]; }; - ctsGE = derive2 { name="ctsGE"; version="1.8.1"; sha256="0zwaky1azh7692qz2w64r5f13w1anww2a8wld10238nlnbmyzjrb"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; - cummeRbund = derive2 { name="cummeRbund"; version="2.24.0"; sha256="1fl8p63zr1jxif95anhqg56cssi44k5y05g7qxpkf2w3siyv1b91"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; - customProDB = derive2 { name="customProDB"; version="1.22.1"; sha256="0wqjkgrjd3m6dx150039q1srfgp2749bfn8awdbmprl9pp4mkxx8"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; - cycle = derive2 { name="cycle"; version="1.36.0"; sha256="0kx40mi7dh6k1s3vc32537q8585q8v4applzyw1y2pklap7sxzyl"; depends=[Biobase Mfuzz]; }; - cydar = derive2 { name="cydar"; version="1.6.1"; sha256="1j3d817xlhhxn4p32cms8br1kbpl34zdx502p70m4jd4sb6kr8p1"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; }; - cytolib = derive2 { name="cytolib"; version="1.4.1"; sha256="0fl4p0ddbv0ifd4pyyda9ydfk47dg1rs3qd11wwqfc54ydqzcaha"; depends=[BH RProtoBufLib]; }; - dSimer = derive2 { name="dSimer"; version="1.8.0"; sha256="0pcggyimicsyx9wkgjxny8byyhb31phcr8xygi6sfkm17r2nxkwy"; depends=[AnnotationDbi ggplot2 GO_db igraph org_Hs_eg_db Rcpp reshape2]; }; - daMA = derive2 { name="daMA"; version="1.54.0"; sha256="0mgd90hdq0045bvzkvxfm6vd3i1n8fa0zmwnsyz5kmhavcynbvpj"; depends=[MASS]; }; - dada2 = derive2 { name="dada2"; version="1.10.1"; sha256="0858c4s7sqb54ida79dh3a6d0fxzh3c4pmxmp3vr0cnfndrlk5r1"; depends=[BiocGenerics Biostrings data_table ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; }; - dagLogo = derive2 { name="dagLogo"; version="1.20.0"; sha256="1h4mhhnmnfqifa1mxk03j1y7w1azai705q95wdji2nvyhi7gkas2"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; }; - dcGSA = derive2 { name="dcGSA"; version="1.10.1"; sha256="1vma7gwl9ai8mj7zxc02g203cljcnyri69jgi7xl963pizya7cnj"; depends=[BiocParallel Matrix]; }; - ddCt = derive2 { name="ddCt"; version="1.38.0"; sha256="1gfxk55f8cgq9bs7rab01qi9093kmjii4833bxcxjhfx1mgsmgzz"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; - ddPCRclust = derive2 { name="ddPCRclust"; version="1.2.0"; sha256="1s9k86l0jc3jkwc2y85ccmn3jlfcwp985xhjfnv43rlfsi181063"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; }; - debrowser = derive2 { name="debrowser"; version="1.10.9"; sha256="1xdqw7scpzc4mw73f5la7km0yyvzhl5w9kxigpnlypba0npslpby"; depends=[annotate AnnotationDbi clusterProfiler colourpicker d3heatmap DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva]; }; - decontam = derive2 { name="decontam"; version="1.2.1"; sha256="0zi5nc39xvdrqdikqfvwhi5jly2gqv3z9r4wwbw78ijgwblvd8n1"; depends=[ggplot2 reshape2]; }; - deepSNV = derive2 { name="deepSNV"; version="1.28.0"; sha256="0maswzsfv9rw01v9alq9jbifc8lg6g2h65338v9chb05dkj03baj"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; - deltaGseg = derive2 { name="deltaGseg"; version="1.22.0"; sha256="02mjlrs3rvlbqdsw9nw03y5ifzkfy1n5r7h4811ghvizy8cdxpqj"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; - derfinder = derive2 { name="derfinder"; version="1.16.1"; sha256="1wdig8zfpq1635b83npmram5zwxslgfgv3npswkjjjnbfzngwz2m"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; - derfinderHelper = derive2 { name="derfinderHelper"; version="1.16.1"; sha256="1a37q7gkg16wyjznbjgn974kmw0rh2dmknvbf9rpzp9hcibzkcqf"; depends=[IRanges Matrix S4Vectors]; }; - derfinderPlot = derive2 { name="derfinderPlot"; version="1.16.1"; sha256="0pa4ycm3f1bim8byy8ygb8z2r7441rwhmbj7y538scihrsk1q03k"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer RefManageR reshape2 S4Vectors scales]; }; - destiny = derive2 { name="destiny"; version="2.12.0"; sha256="1iay17mrhsfmpwl920rh1nip5b6ybva4h6bna0yld04paq5yva67"; depends=[Biobase BiocGenerics ggplot2 ggthemes igraph Matrix proxy Rcpp RcppEigen scales scatterplot3d smoother SummarizedExperiment VIM]; }; - dexus = derive2 { name="dexus"; version="1.22.1"; sha256="109sk2nxaqx0jalw06r3ydy6wdbac76j66sh9431b480p6bcgf1r"; depends=[BiocGenerics]; }; - diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.64.0"; sha256="00f088phbix7wrcjrpf3n2a2ps102sbc85f4fg5sqwdw6bvchk9c"; depends=[minpack_lm]; }; - diffHic = derive2 { name="diffHic"; version="1.14.0"; sha256="1yjsvwwai9jflg743nyksj7krm0f2pdy2y2rwnmd3cpwh73yy6al"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; }; - diffcoexp = derive2 { name="diffcoexp"; version="1.2.0"; sha256="1kkm0mw7q81yls750ky9rvx0n9iljgq8j5p9h08yxpr46jc3j8k0"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; }; - diffcyt = derive2 { name="diffcyt"; version="1.2.23"; sha256="08fsvn0phj4f3ih65vizi6bxj6yfwpanran5p79iv28gxbnxzll0"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; }; - diffloop = derive2 { name="diffloop"; version="1.10.0"; sha256="0fi1vvzfifhdgcnal1axn69dqbgpjqsicjgqw6gj41db50zi1fi6"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; - diffuStats = derive2 { name="diffuStats"; version="1.2.0"; sha256="1hg8scxhndgp0r4m5r7rjliirb4371g9d3lqx2h9mgshadwz5h0r"; depends=[expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; - diggit = derive2 { name="diggit"; version="1.14.0"; sha256="1kpi1ahwc90mpfwmy6rsf4argf7fss99lr2v0s99aj39m3lwd2dw"; depends=[Biobase ks viper]; }; - discordant = derive2 { name="discordant"; version="1.6.1"; sha256="12zh1qm7l7zq310y4n5fimia1jkxm3ia81br0illyna0kx10b9wq"; depends=[Biobase biwt gtools MASS]; }; - dks = derive2 { name="dks"; version="1.28.0"; sha256="0md8x07f117clhxmmrqaki5g5y8r13c4yrw8vk6yvcsf9prybdah"; depends=[cubature]; }; - dmrseq = derive2 { name="dmrseq"; version="1.2.5"; sha256="1dlzkflfklipirwiam2bi65j6fy9kcpgigyayfiwss3l1nr9dz70"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; }; - doppelgangR = derive2 { name="doppelgangR"; version="1.10.1"; sha256="14jlrvx6xb6h8x9qg0fm0hb11dk906ja8vfl1wn6wgdrh8fw6brl"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; }; - drawProteins = derive2 { name="drawProteins"; version="1.2.0"; sha256="13zqpghzpqg92i4mlfmvwx1l1mb7swqmyhisqjp546jzs7vixv25"; depends=[dplyr ggplot2 httr readr stringr]; }; - dualKS = derive2 { name="dualKS"; version="1.42.0"; sha256="0mn0mjzncd53wq0jwq2gfcj3mcsfl81hgsaxnf1dqjwqnw4jy1y3"; depends=[affy Biobase]; }; - dupRadar = derive2 { name="dupRadar"; version="1.12.1"; sha256="1dmkzhdwzw2r0srwi96g0csxcsg2m8xh1446p75byjarvmyzmqh8"; depends=[Rsubread]; }; - dyebias = derive2 { name="dyebias"; version="1.42.0"; sha256="1ml85klh9mwxmz8h2yjagx4sl0dnzg4ijk4pa154njznxr8kqccz"; depends=[Biobase marray]; }; - easyRNASeq = derive2 { name="easyRNASeq"; version="2.18.4"; sha256="16ffm3gdag8fdm8pbq7pnxmrzndbig9ryw981hcplk847ij1rxjc"; depends=[Biobase BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; - ecolitk = derive2 { name="ecolitk"; version="1.54.0"; sha256="0gbw2kdfnyjlq0paqy8hlz8qmaczfa5qx9wzj3ax3vms5v6n58qp"; depends=[Biobase]; }; - edge = derive2 { name="edge"; version="2.14.0"; sha256="0gcwnw9c6qc9b207vlchnw59d025jrdm4b7w5iiw721djwwawdzf"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; - edgeR = derive2 { name="edgeR"; version="3.24.3"; sha256="15yimsbsxmxhlsfmgw5j7fd8qn08zz4xqxrir1c6n2dc103y22xg"; depends=[limma locfit Rcpp]; }; - eegc = derive2 { name="eegc"; version="1.8.1"; sha256="14jjd27hblz1ls1463vd4ymdq58h9as82lj160smy0n8jqpc5nhh"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; - eiR = derive2 { name="eiR"; version="1.22.0"; sha256="07lnpgaplw6d63c3wjas5n8rxhgmk75qkq3nvp7w26lmgi4ysz6z"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; - eisa = derive2 { name="eisa"; version="1.34.0"; sha256="1717bpmrr1kmd1a8rqlarhqcrk786vjw55shn5sd8c89f25vspdx"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; - enrichplot = derive2 { name="enrichplot"; version="1.2.0"; sha256="0cxqfpy6py4k3z3lnlkiwx89r4ymfpdc4hm25dfpazqgjflz5is7"; depends=[AnnotationDbi cowplot DOSE europepmc ggplot2 ggplotify ggraph ggridges GOSemSim gridExtra igraph purrr RColorBrewer reshape2 UpSetR]; }; - ensemblVEP = derive2 { name="ensemblVEP"; version="1.24.2"; sha256="02akxzgf4q6n41pghx2fwk3l9b74db0vdlycnvv868d0rfb11d0x"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; - ensembldb = derive2 { name="ensembldb"; version="2.6.8"; sha256="0gijx2l2y00h6gfj3gfr7rd4vva6qf2vkfdfy5gdmvqlxy84ka38"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; - epiNEM = derive2 { name="epiNEM"; version="1.6.0"; sha256="1pzcajgqsm6mvw8i7aav0918856ghndrdp93831s6zmdkgxzpw2v"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet nem pcalg RColorBrewer]; }; - epigenomix = derive2 { name="epigenomix"; version="1.22.0"; sha256="0cyf35fygr3rgkcfqhb9p9xgl1lydqprzhn3m189yqm3xqck41il"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; - epivizr = derive2 { name="epivizr"; version="2.12.0"; sha256="0ms29c5vl0nn8p4v1l5falmwc8xb6wa8fjbfwrgpz8dphidp7mnm"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; }; - epivizrChart = derive2 { name="epivizrChart"; version="1.4.0"; sha256="03dnkx8zqrhgijipv72ylcrwparqjihzld2ln6dir989kwv75f7l"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; }; - epivizrData = derive2 { name="epivizrData"; version="1.10.0"; sha256="0m7bn9v9j8jsja36x5vj2bs9wg3dw5845r47mw4200j1j4irj9jb"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; - epivizrServer = derive2 { name="epivizrServer"; version="1.10.0"; sha256="17h7cghi9md7yzny07jc0749cpwx5jda78vk9g2db0bf6q91qjq6"; depends=[httpuv mime R6 rjson]; }; - epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.10.0"; sha256="0jvx2kc0wqq7rzi1a3lv94i33cgcqhdpny4563kgjcz9g3qaggsd"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; - erccdashboard = derive2 { name="erccdashboard"; version="1.16.1"; sha256="0xf5nfzjp0jbhyvcia0bxj8rwcmd033gxgvrwrlcq2535v27sdz9"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; - erma = derive2 { name="erma"; version="0.14.0"; sha256="0hj9iz904rr1y66442lkxjywkw1ydyxxlhmjirawbf09ic5ad4g9"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; }; - esATAC = derive2 { name="esATAC"; version="1.4.5"; sha256="0qi6f6pdyjzvsvxl6k5517vkb9c59wwf09439a4g5jx2hp383swq"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot DiagrammeR digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2016 knitr magrittr motifmatchr R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; - esetVis = derive2 { name="esetVis"; version="1.8.0"; sha256="0n2b7qkgy0gh9jfxi5mgsr8g41141435maq1yniw9mqa3hddwjjp"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; - eudysbiome = derive2 { name="eudysbiome"; version="1.12.0"; sha256="09lhzfhlmrw6f50c6d21lmyfh3k4hwrg6waiv1qjg6iavhnbc2a0"; depends=[Biostrings plyr R_utils Rsamtools]; }; - exomeCopy = derive2 { name="exomeCopy"; version="1.28.0"; sha256="1y475ka8lkf3mh4xj0qvgk0nd0gf497dym9bvl5wpss1fqsks6im"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; - exomePeak = derive2 { name="exomePeak"; version="2.16.0"; sha256="0i063k0b9d6vvixp52qkg63nlpqzbq2dhf0ylgwchjjk4zsdz5vn"; depends=[GenomicAlignments GenomicFeatures Rsamtools rtracklayer]; }; - explorase = derive2 { name="explorase"; version="1.46.0"; sha256="0h12i2fh7jm0xq0mxy37rcp3pbg18l88l380jsb9jn02rrgkirkd"; depends=[limma rggobi RGtk2]; }; - fCCAC = derive2 { name="fCCAC"; version="1.8.0"; sha256="04mzxvvm1yssdjdibppbl5yv6zpssk3chm222nhs2h7mn4a30rwq"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; - fCI = derive2 { name="fCI"; version="1.12.0"; sha256="0wxc6nhl5gcz70i9nbj7caxgif3bpajng8h8pckarflms1va2ic0"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; - fabia = derive2 { name="fabia"; version="2.28.0"; sha256="1ps10cqldbz99rszxqznqc3vlci4fmhyhwcim8bfch197b1pnfl5"; depends=[Biobase]; }; - factDesign = derive2 { name="factDesign"; version="1.58.0"; sha256="113sjbx1r7yzps0mjpka5mf0mx324z4vg0adl7k965p3r0cv3jwm"; depends=[Biobase]; }; - farms = derive2 { name="farms"; version="1.34.0"; sha256="02vb8cy2j53l05naifrafw4pa48ay3hbsxrlm5s3nbmy4cma6rwr"; depends=[affy Biobase MASS]; }; - fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.18.0"; sha256="109db3kv8rf7dwlsn2cyv5s44b86nmzj746awf28rc03f6ih8f13"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; }; - fastseg = derive2 { name="fastseg"; version="1.28.0"; sha256="1l8mdjpfpgwqdss2ywjkb8b4h55wf8v6kmyxdlvy04ds2hj16sb1"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; - fdrame = derive2 { name="fdrame"; version="1.54.0"; sha256="1srv11bwyjxlvgv5hky4afwn2bhc8kdvra61jc1dn81qaj5vx41a"; depends=[]; }; - ffpe = derive2 { name="ffpe"; version="1.26.0"; sha256="1bcpdj978wiwfwfbpvnj622wqq4axh82djn17l5vrm20p2hgm74n"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; - fgsea = derive2 { name="fgsea"; version="1.8.0"; sha256="0cxxvlmg340l5l5fz4abbwppiri0ibg4navvq5k3wg511mz8ma2q"; depends=[BiocParallel data_table fastmatch ggplot2 gridExtra Matrix Rcpp]; }; - flagme = derive2 { name="flagme"; version="1.38.1"; sha256="1llzkq5944kgh32xns67f8bcfvpgia809b1ly1nfhpa2mpfsvyr1"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; - flipflop = derive2 { name="flipflop"; version="1.20.0"; sha256="100ia0j4ir61ihriyz36jnxpa9s4ivs35fifs4yzfiysf7lma3al"; depends=[GenomicRanges IRanges Matrix]; }; - flowAI = derive2 { name="flowAI"; version="1.12.7"; sha256="1s4mll9zdn84dlf08p91lacs70rijq2rv717f2rk6m71a48l6ac4"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; }; - flowBeads = derive2 { name="flowBeads"; version="1.20.1"; sha256="06w9lfsam3mv9gv6qigsjw9vl169kcyaa7vrh2ii138gry20b9qz"; depends=[Biobase flowCore knitr rrcov xtable]; }; - flowBin = derive2 { name="flowBin"; version="1.18.1"; sha256="1fdj5ziyc10fp27jarx18z97vxnf7d5zy2nwbia6x441svrvc534"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; - flowCHIC = derive2 { name="flowCHIC"; version="1.16.1"; sha256="1472c1jdg9zk94pw84nbr8042rh7k7mrdbyjncqcigrx12dhgdh6"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; - flowCL = derive2 { name="flowCL"; version="1.20.1"; sha256="013b81ab3pmfb3n4430ihwc2qbgqf3iyyykzmqdhqs8llcrpqvph"; depends=[graph Rgraphviz SPARQL]; }; - flowClean = derive2 { name="flowClean"; version="1.20.0"; sha256="0m8n75gkf1dwhs4hyk1jfqvsmb2lymvi0znikb1gi8bkh9224wvk"; depends=[bit changepoint flowCore sfsmisc]; }; - flowClust = derive2 { name="flowClust"; version="3.20.1"; sha256="1wk2hwc9fbhjqw0cic3mgh5xg82nwg0m6548b5cvn5f8ywxs2f4m"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph mnormt]; }; - flowCore = derive2 { name="flowCore"; version="1.48.1"; sha256="04cmydy10i1zrd293cjam7v8i1habm27m5ggpp52jcsy7db9gg7p"; depends=[BH Biobase BiocGenerics corpcor graph MASS matrixStats Rcpp rrcov]; }; - flowCyBar = derive2 { name="flowCyBar"; version="1.18.1"; sha256="0lnfn2xxd3zbr1jn1vdd6b6yaljddn525fsb7g0i7nsl3py89nfy"; depends=[gplots vegan]; }; - flowDensity = derive2 { name="flowDensity"; version="1.16.1"; sha256="0kmy3k54aghv1vkdmply5pwyr8dxfipa1qi1b7xrqa7zbwa8dxq4"; depends=[car flowCore flowWorkspace gplots RFOC rgeos sp]; }; - flowFP = derive2 { name="flowFP"; version="1.40.1"; sha256="1dq634pw4d89gmqw71nzb2paqlzkm2q53xv9rbl4rpglxb3325gb"; depends=[Biobase BiocGenerics flowCore flowViz]; }; - flowFit = derive2 { name="flowFit"; version="1.20.1"; sha256="0f03p0jki13lip694ahd0ym3ixlmj60vkspkzcwq88mpkvmj03jn"; depends=[flowCore flowViz gplots kza minpack_lm]; }; - flowMap = derive2 { name="flowMap"; version="1.20.1"; sha256="0bsy52jhgj81xd20ycdz35n70k71c40hx5lm25gh5v6sxh5598qw"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; - flowMatch = derive2 { name="flowMatch"; version="1.18.1"; sha256="03qkisbfzpkz6a4l91gg8biyk5apc2cjqrvilrf9yawp2gypff62"; depends=[Biobase flowCore Rcpp]; }; - flowMeans = derive2 { name="flowMeans"; version="1.42.1"; sha256="1jxhga0wlgn69h4mplzb140grxaxxb0psjgnr9jkcm9c6d6mh9qp"; depends=[Biobase feature flowCore rrcov]; }; - flowMerge = derive2 { name="flowMerge"; version="2.30.1"; sha256="1dn6wxaix56r3fw273prbajc84h1k1b03q6wh0pfhy0gr6qk8wgw"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; - flowPeaks = derive2 { name="flowPeaks"; version="1.28.1"; sha256="08g8bnb6h9gc34qx511gd5r9wrfxd6wr1wfzgazswc3idg5pqli6"; depends=[]; }; - flowPloidy = derive2 { name="flowPloidy"; version="1.8.0"; sha256="0s2d541id8mf3igidn5n7v6d3g21yaskzc7kx9zvywx9391sd9qx"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; - flowPlots = derive2 { name="flowPlots"; version="1.30.1"; sha256="1ygbd62kyqpmlln55m65n0jb8k7kdqxpihwlrp5yickxv7g99zx6"; depends=[]; }; - flowQB = derive2 { name="flowQB"; version="2.10.1"; sha256="0cpp6pn1w2ccixxclx6cmv7hzsqc0bcsbwyy1vz2lvwrrmvsk8z3"; depends=[extremevalues flowCore]; }; - flowStats = derive2 { name="flowStats"; version="3.40.1"; sha256="0krj1x5jpzl6ravqmb7ccgmdf246627sd32zp8sblb1fz9nr0pzp"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow RColorBrewer]; }; - flowTime = derive2 { name="flowTime"; version="1.6.1"; sha256="1an5cx6dbl6y7llss1w27v5csz7pvfng7490ig3fynnkfldl8n52"; depends=[flowCore plyr]; }; - flowTrans = derive2 { name="flowTrans"; version="1.34.1"; sha256="0wav5y4gzbciyvv9php7lkhqr5h1gwk42qx0665df3zcbwxkahcb"; depends=[flowClust flowCore flowViz]; }; - flowType = derive2 { name="flowType"; version="2.20.1"; sha256="0dpbkcf7rh1sf8hi5mmxjq6nd72w8xhjcxf2lzfn0iyxvdfb76w3"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; }; - flowUtils = derive2 { name="flowUtils"; version="1.46.1"; sha256="0vk8xq623p6pfp92fllza2vyxm4b92w98dc6v3d9ik88nyp1ppzz"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; - flowVS = derive2 { name="flowVS"; version="1.14.1"; sha256="06kprjxrjywvc1w5ic1753npz5p4k8fhqx6361wqzzzhzihj6gy6"; depends=[flowCore flowStats flowViz]; }; - flowViz = derive2 { name="flowViz"; version="1.46.1"; sha256="0php2rng4da7jk98rvmkfwm994qnqkrlqmqpqy4kl19w3gsc00i1"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; - flowWorkspace = derive2 { name="flowWorkspace"; version="3.30.2"; sha256="19ifpwpk9rmmfm647zm419k50hna8ib0ad75l04xbggdm6s3vm41"; depends=[BH Biobase BiocGenerics cytolib data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra matrixStats ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz RProtoBufLib scales stringr XML]; }; - flowcatchR = derive2 { name="flowcatchR"; version="1.16.0"; sha256="0cwfm8d3s7nvkfm0zfx84mcamyszc8cwwy7b9rn9m27rj3q80f1z"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; }; - fmcsR = derive2 { name="fmcsR"; version="1.24.0"; sha256="0dl39066y0s391hczpi3482dwwpsp1767f6n881n00sv7pb4znxy"; depends=[BiocGenerics ChemmineR RUnit]; }; - focalCall = derive2 { name="focalCall"; version="1.16.0"; sha256="06x6d5j17wabdy03r4h9clmdp69wbxgzpsvalrmg8l4yyj9z7lrc"; depends=[CGHcall]; }; - frma = derive2 { name="frma"; version="1.34.0"; sha256="1g48s0kji9ln4z80h704j1rc5vji9g8kx8mgngi95k7vj744firg"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; - frmaTools = derive2 { name="frmaTools"; version="1.34.0"; sha256="1n1i5xsn38ml7h34pkv4xlx8yvrf4vpcjrz92sfzmrff531gf3a2"; depends=[affy Biobase DBI preprocessCore]; }; - funtooNorm = derive2 { name="funtooNorm"; version="1.6.0"; sha256="0s4vafjskzyc6hf616cbi7g9prf6lh7fmi7zywr97pr11390n7qg"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; - gCMAP = derive2 { name="gCMAP"; version="1.26.0"; sha256="1ql9nxlj4wgc22g699lxsn57iam7k3w33v3cinhywsy9zfswawh9"; depends=[annotate AnnotationDbi bigmemory bigmemoryExtras Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; - gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.22.0"; sha256="0jvn3h3hn2b8av0c901gbidhrkgkhhm4027qymn5dhg4xsg2dayg"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; - gCrisprTools = derive2 { name="gCrisprTools"; version="1.10.1"; sha256="148ggbbhvg0ja55zs1vlcjpjgcc50mgfq58ixfi7pifiaszzwh6s"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; }; - gQTLBase = derive2 { name="gQTLBase"; version="1.14.0"; sha256="1lbk1m1mkvbk30flk5pf3pcrnm2s0sj5r48kbjgad39dsvd8zgqx"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; - gQTLstats = derive2 { name="gQTLstats"; version="1.14.1"; sha256="1rkbnb3h02fdksc4nacqvmq4jgbj9fz4hm7j51yr2ggcgcykwraa"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr erma ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggbeeswarm ggplot2 gQTLBase HardyWeinberg Homo_sapiens IRanges limma mgcv plotly reshape2 S4Vectors shiny snpStats SummarizedExperiment VariantAnnotation]; }; - gaga = derive2 { name="gaga"; version="2.28.1"; sha256="017ga7m85qzxvfvg13gilsikc06vr8ggfp07aw36gdn9q8by76d5"; depends=[Biobase coda EBarrays mgcv]; }; - gage = derive2 { name="gage"; version="2.32.1"; sha256="02g796sb1800ff0f1mq9f2m5wwzpf8pnfzajs49i68dhq2hm01a8"; depends=[AnnotationDbi graph KEGGREST]; }; - gaggle = derive2 { name="gaggle"; version="1.50.0"; sha256="1yj10aahr1pmn7kspiplczalr1awmybr320y49cadh17l3p3i224"; depends=[graph rJava RUnit]; }; - gaia = derive2 { name="gaia"; version="2.26.0"; sha256="1a3lmazx5dlb484llfvwk6b4g89r3dcbmkjz7wah44kpyp0k5lrv"; depends=[]; }; - garfield = derive2 { name="garfield"; version="1.10.0"; sha256="1hcb4dvhir20ldfr7zrd0b3xcdpkafb0sc3gwns4651a9hs2cx8j"; depends=[]; }; - gcapc = derive2 { name="gcapc"; version="1.6.0"; sha256="00jv9c231s4zr02nl11qcs8qlbwklyc0iis1c4n2ifkp8kcd1c34"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; - gcatest = derive2 { name="gcatest"; version="1.12.0"; sha256="14902mc3vnnj64xxhj5dzd787r59wj0dryn074n4yyw0lyzfydwk"; depends=[lfa]; }; - gcrma = derive2 { name="gcrma"; version="2.54.0"; sha256="1v5fi98gdmj002ryq0rgsg2l4x3m3w5pz4h3bx4v8lk15azafgim"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; }; - gdsfmt = derive2 { name="gdsfmt"; version="1.18.1"; sha256="1axbs23armc8r4nmfnhv6ripxzh551lgwd0580nknif4jj1a98ga"; depends=[]; }; - geNetClassifier = derive2 { name="geNetClassifier"; version="1.22.0"; sha256="079v4jrscq93kapv4676d4zsy3rk7j547pn9hsj7fi0sypv9sg4h"; depends=[Biobase e1071 EBarrays minet]; }; - geecc = derive2 { name="geecc"; version="1.16.1"; sha256="0axbina6xvv9l8ymswlxa989kzif2cy5njfis8g6pfnx0dfmnrmp"; depends=[gplots hypergea MASS Rcpp]; }; - genArise = derive2 { name="genArise"; version="1.58.0"; sha256="0drncw83b214w8fk11z3dilshd9p9z4irb23gbvkq67xm62nbkxn"; depends=[locfit tkrplot xtable]; }; - genbankr = derive2 { name="genbankr"; version="1.10.0"; sha256="18pw66ilh7mnlar94885k182hay05vana7pjki38bb2jbifk4m2f"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; - geneAttribution = derive2 { name="geneAttribution"; version="1.8.0"; sha256="1wngaq654gzp2llk8zk8z3gmnpb3lwx4l6sfi9dn8n551q6lbbcg"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; - geneClassifiers = derive2 { name="geneClassifiers"; version="1.6.0"; sha256="0nxp2jmrq3fyhvgys4gxycqc7v2nixsa3mk57fq3339xilcxzycp"; depends=[Biobase BiocGenerics]; }; - geneRecommender = derive2 { name="geneRecommender"; version="1.54.0"; sha256="1b6y5ilz1ffsqsb5y667sa9fi4h6hpwk4wgdiy13lq2vry9x7j0w"; depends=[Biobase]; }; - geneRxCluster = derive2 { name="geneRxCluster"; version="1.18.0"; sha256="0kg42vy1asv5gak2d9h3fm679yfai7d7n56nqig3dny5a0g04fmc"; depends=[GenomicRanges IRanges]; }; - geneXtendeR = derive2 { name="geneXtendeR"; version="1.8.0"; sha256="1nkaxzw8vdxafb9nb39lwdb6qj8z54p19l8rw1rdjy8dxlia262n"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; - genefilter = derive2 { name="genefilter"; version="1.64.0"; sha256="0p64s1n1627yafnp25wjr4b22p34lqw574fx2qg4s1m0lffh1z6i"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; }; - genefu = derive2 { name="genefu"; version="2.14.0"; sha256="1dapkgmjwxr6c62l72h217xrjnycnc3sc7qclmbrbwjl42c6ma1f"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; }; - geneplast = derive2 { name="geneplast"; version="1.8.0"; sha256="06xvdsfjqg8jx8b1g8i829i8x8p2bxv57hzflh08nd6n91fys6qn"; depends=[ape igraph snow]; }; - geneplotter = derive2 { name="geneplotter"; version="1.60.0"; sha256="10khr0pznxf3m0f5gzck9ymljrwcv3vamfmpskd51yjh36lhllqz"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; - genoCN = derive2 { name="genoCN"; version="1.34.0"; sha256="164d9cwp6mngmmvk1lc7xs03w9sqqx7b3w4mrx94xg5f4k2jzv3m"; depends=[]; }; - genomation = derive2 { name="genomation"; version="1.14.0"; sha256="0g0v4alfpqlinqinjnyzl3mrjnpbdx9ri34mcaiqbvbvg8ic8wvg"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; - genomeIntervals = derive2 { name="genomeIntervals"; version="1.38.0"; sha256="09ck7d1lklxh5rr8k4rfswlyi41a94siqpqfp6byf34qjhv9mxvv"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; - genomes = derive2 { name="genomes"; version="3.12.0"; sha256="18pwqjr01qwjn93vyf2pfp5n88djyb0vln78m8kl598pcxr7ifkh"; depends=[curl readr]; }; - genoset = derive2 { name="genoset"; version="1.38.0"; sha256="1z0iwp5pp3655kd63p3jf5fficd61p1i0g06p2n6pw4q38dp2h28"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - genotypeeval = derive2 { name="genotypeeval"; version="1.14.0"; sha256="0xi0n87g5qh1yswr3whv8wvmxswd66j6g8662qsfgy3cs69hxl3m"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; - genphen = derive2 { name="genphen"; version="1.10.3"; sha256="0hjfgy3q4x1ib91cxgszay7fvjaiqi62915pg4z3hd9xd9lpjiqn"; depends=[BH Biostrings doParallel e1071 foreach ranger Rcpp RcppEigen rstan rstantools StanHeaders]; }; - gep2pep = derive2 { name="gep2pep"; version="1.2.0"; sha256="1sxkps92hf85svngd5511j3sbwn8904nn9ijn168v7xzzmld3z5y"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; }; - gespeR = derive2 { name="gespeR"; version="1.14.1"; sha256="1d8jvwnmnd27860n9qk5500mi73kdnvzwkfsqjp0xzz6ji5l9khs"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; - ggbio = derive2 { name="ggbio"; version="1.30.0"; sha256="0wq49qqzkcn8s19xgaxf2s1j1a563d7pbhhvris6fhxfdjsz4934"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - ggcyto = derive2 { name="ggcyto"; version="1.10.2"; sha256="0nhwrsc4drswpyz6w3v3h5q0cwzi92a0kzx47n3x6drdjdrv4w21"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer rlang scales]; }; - ggtree = derive2 { name="ggtree"; version="1.14.6"; sha256="0jp4djkjvhvidp8ic44wq527rjzsh5awqfll2g9bdlypmjs21494"; depends=[ape dplyr ggplot2 magrittr purrr rlang rvcheck scales tibble tidyr tidytree treeio]; }; - girafe = derive2 { name="girafe"; version="1.34.0"; sha256="13hk8rfldbwadqhy5mqcdzggili3ib6whwqcf85pl72x627iif5j"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; - glmSparseNet = derive2 { name="glmSparseNet"; version="1.0.0"; sha256="0aqcnqmnl977yc7lp9gb8a4hqaxdh2pjw2lhiw3vly933xzd78sc"; depends=[biomaRt dplyr forcats futile_logger ggplot2 glmnet loose_rock Matrix MultiAssayExperiment readr reshape2 rlang sparsebn sparsebnUtils STRINGdb stringr SummarizedExperiment survminer]; }; - globalSeq = derive2 { name="globalSeq"; version="1.10.1"; sha256="1vvhqn04b0kl0xdyp7ga4dlbvh15gw0f5nr8ssw7rr1flzcp1jik"; depends=[]; }; - globaltest = derive2 { name="globaltest"; version="5.36.0"; sha256="16v8rn25n87kk892c3yvmqdv03csqdrzp7krcr8w2y0wznys2cqn"; depends=[annotate AnnotationDbi Biobase survival]; }; - gmapR = derive2 { name="gmapR"; version="1.24.2"; sha256="0j4k5r2lx0kng2826vi9535pc7lflgqvwsqcq7bkbrzmc287k465"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - goProfiles = derive2 { name="goProfiles"; version="1.44.0"; sha256="0rpks421g0rbdcfnkfqpd5l22cysdcfljnmngq9pbgh04wpwi8f1"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; }; - goSTAG = derive2 { name="goSTAG"; version="1.6.1"; sha256="0ib9a1v9zblysmk7a6wrg6cj1q6is2s9mranb28nn2r067kfx77l"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; - goTools = derive2 { name="goTools"; version="1.56.0"; sha256="0w2mb8g5fnn7vm35cqw437f2sdiba4c72ay1n7frh0z1xc7hqc3r"; depends=[AnnotationDbi GO_db]; }; - goseq = derive2 { name="goseq"; version="1.34.1"; sha256="1j87j98cajcjqabv6rb6zmcqxsqxxhbb3w60w1iink4rhsh8m3mn"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; - gpart = derive2 { name="gpart"; version="1.0.3"; sha256="0aqz4b8qbll80xqrf5x9y4y0iw3f94ncvnhw3ifalj2rh39p15cw"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - gpls = derive2 { name="gpls"; version="1.54.0"; sha256="14sffq2h6hqlzaq1nzw34rkg7nnshfp6k5r3wyvavq6k25384jr0"; depends=[]; }; - gprege = derive2 { name="gprege"; version="1.26.0"; sha256="0b2zrxggljfgr8w2ns7h80ymqrvfi8kaliy32k2najm089kpv8dy"; depends=[gptk]; }; - graph = derive2 { name="graph"; version="1.60.0"; sha256="1kgnsm6f0vmb9qbkmmrnvxbwqc0gar17dq5gv1v10hrksw6mh64i"; depends=[BiocGenerics]; }; - graphite = derive2 { name="graphite"; version="1.28.2"; sha256="0jdi5s7ffl7snwxrbk1nj8vb4db5wv328ipypyl8ddrzk6rljcy5"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; - groHMM = derive2 { name="groHMM"; version="1.16.0"; sha256="1ph92fv44b90v7mk4b1mjvv0dlrhl8ba01klxbnd0vs4qn9zxplh"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; - gsean = derive2 { name="gsean"; version="1.2.1"; sha256="0amx19163pfff16hncphh4nccdp7br2f1v5ddzynzx8drslywz1p"; depends=[fgsea PPInfer]; }; - gtrellis = derive2 { name="gtrellis"; version="1.14.0"; sha256="17c43vs6m6hj90x5is0pbcpcv59gg9z98c47hnvlypgcqch38h6v"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; - gwascat = derive2 { name="gwascat"; version="2.14.0"; sha256="1fnyjydhicq4ayrv0lqjv48h9bd72h40s6l82g1h2ng0icwz38g0"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gQTLstats graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; - gwasurvivr = derive2 { name="gwasurvivr"; version="1.0.0"; sha256="0f1p2l6ypbrnaqlmqsjz5rfa6afd4kqhkrniqi7hfwjza7myrcvp"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; }; - h5vc = derive2 { name="h5vc"; version="2.16.0"; sha256="1jhl2cv8rd9sfw5adm81ncpz3ysyb9wdvjzqg7k48rh5ycgi9whz"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; }; - hapFabia = derive2 { name="hapFabia"; version="1.24.0"; sha256="1y14gmm4vj5qvnkbssqr4scqrl86v949kd6y0ic48p5rlqcgsjj3"; depends=[Biobase fabia]; }; - heatmaps = derive2 { name="heatmaps"; version="1.6.0"; sha256="1srppr0y50y2j9ajscc93778jk2s7pnaqnf4h7yf12cx8185izsj"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; }; - hiAnnotator = derive2 { name="hiAnnotator"; version="1.16.0"; sha256="0hbrrvdl41nidsihyalnqridg87gidpnzdb6scf07jyfqmdym862"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; - hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.18.0"; sha256="0azmgzczkbjhg8fpl7js4g3s44lna3jzsdccchfv715smykxs24n"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl rSFFreader sonicLength]; }; - hicrep = derive2 { name="hicrep"; version="1.6.0"; sha256="0j92hg6qk9rd84lkl63zirwyydvnsrsgwibyv8ndrap4nw9hiswv"; depends=[]; }; - hierGWAS = derive2 { name="hierGWAS"; version="1.12.0"; sha256="0fsp5zyaz7kdgyyfnzvzcvsscxh69skvkn245sw41svq3gyswpcl"; depends=[fastcluster fmsb glmnet]; }; - hierinf = derive2 { name="hierinf"; version="1.0.0"; sha256="0p0kxqap5qdrfgh6jcn94c7hdk9k3xp178wz5ip1c3x3pqj30ndh"; depends=[fmsb glmnet]; }; - hipathia = derive2 { name="hipathia"; version="1.4.1"; sha256="1hnq2rl2g1an7q2hxc3s7sn1hynhapmb5qjj4ishcpv0irygb8ha"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; }; - hmdbQuery = derive2 { name="hmdbQuery"; version="1.2.0"; sha256="0wliaddym62p9gf57y349q854jsng5chh5jd0gh3j3pdg5nlb7c0"; depends=[S4Vectors XML]; }; - hopach = derive2 { name="hopach"; version="2.42.0"; sha256="0mrc9yw1gwk6nx0bdcckphd5n13si3yvf3brn5yyg6xnl1b019c3"; depends=[Biobase BiocGenerics cluster]; }; - hpar = derive2 { name="hpar"; version="1.24.0"; sha256="1pm3k8apgynmdzv2d0chca3b636kcai3b1x861fyv1m3xs6msgxn"; depends=[]; }; - htSeqTools = derive2 { name="htSeqTools"; version="1.30.0"; sha256="11lywvkgl07fd2f82j00lw8zbvdg4g2aaa2w670vhh24v5w38xng"; depends=[Biobase BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges MASS S4Vectors]; }; - hyperdraw = derive2 { name="hyperdraw"; version="1.34.0"; sha256="0widxxs8rk9xmpzwj4pmxg5px2ym2g2psqiwnqnhvd0pqhfpssvr"; depends=[graph hypergraph Rgraphviz]; }; - hypergraph = derive2 { name="hypergraph"; version="1.54.0"; sha256="1qhn3y3wvh2azbcabi95zbpdlv0y1fhrw3l8w7qgi78asiq5b3jp"; depends=[graph]; }; - iASeq = derive2 { name="iASeq"; version="1.26.1"; sha256="1qnpdsqpgi9bp39vyhdhjajdq552gd0q5pb23p274w3zr9sw6v6h"; depends=[]; }; - iBBiG = derive2 { name="iBBiG"; version="1.26.0"; sha256="02pw4v01ck6kfpylbymy46wsavcpf1q9xmrz1fywb1z5rday2kdb"; depends=[ade4 biclust xtable]; }; - iBMQ = derive2 { name="iBMQ"; version="1.22.0"; sha256="08lw0a4c9gp3vx6ggrxmsr2lgikfzw5gdw3ri08f89cqqmb6cazi"; depends=[Biobase ggplot2]; }; - iCARE = derive2 { name="iCARE"; version="1.10.3"; sha256="1m58fprg00ns55cgbd63dn9276hx3351r69cwskrrsl68kza3i2r"; depends=[gtools Hmisc plotrix]; }; - iCNV = derive2 { name="iCNV"; version="1.2.1"; sha256="10kqd00sfq1v6lyydif7a8nwc4xg9z3db70p1c3s4y2iyia2kzdk"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; }; - iCOBRA = derive2 { name="iCOBRA"; version="1.10.0"; sha256="0i1swrm31g0zffi5pm48bfvdfqpd32d0zdchkbyipz96al46jnld"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; - iCheck = derive2 { name="iCheck"; version="1.12.0"; sha256="0wsgplym9kf1v7lvnnkxxgs9d9ahhb456vs9kgxydik94hyxpiz4"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; - iChip = derive2 { name="iChip"; version="1.36.0"; sha256="1ak11v8xywgqximfy99g3d2lyci7pj0r4p1yy6g77j8bwf1frz5d"; depends=[limma]; }; - iClusterPlus = derive2 { name="iClusterPlus"; version="1.18.0"; sha256="08w6f1ad1mc05ws7jdq1j6sn3rflbdp1q5nii09a6qjx83micr4n"; depends=[]; }; - iGC = derive2 { name="iGC"; version="1.12.0"; sha256="1m3mhxkvxsswmk6sqd78brx94pwyzc3z71kv2dzxj1409g6s1h25"; depends=[data_table plyr]; }; - iPAC = derive2 { name="iPAC"; version="1.26.0"; sha256="01s5sgkid33jhzkjk7mdkdn48asp4ibj8b9r5cx5f3ngmkbfpdql"; depends=[Biostrings gdata multtest scatterplot3d]; }; - iSEE = derive2 { name="iSEE"; version="1.2.4"; sha256="0n6xc7h655vr0n5m8kkrzqda7nyjm4ixbgymf14imwrw37h3arzx"; depends=[AnnotationDbi BiocGenerics colourpicker cowplot dplyr DT ggplot2 igraph mgcv rentrez reshape2 rintrojs S4Vectors scales shiny shinyAce shinydashboard shinyjs SingleCellExperiment SummarizedExperiment vipor viridisLite]; }; - iSeq = derive2 { name="iSeq"; version="1.34.0"; sha256="0hlslyypijb4w9m01xkn6r8svs0kkp4nbv4xdz844pvyyxcn4afc"; depends=[]; }; - iasva = derive2 { name="iasva"; version="1.0.1"; sha256="1cmbsa75fhs5zxjlfijwknk5s5i6w9q7r7xn34m3hz0y9asg62fc"; depends=[BiocParallel cluster irlba SummarizedExperiment]; }; - ibh = derive2 { name="ibh"; version="1.30.0"; sha256="0wghj4qbnfg7zy1pbz580x9m1wszlhiyc34s9sd4q5spviz8dxh5"; depends=[simpIntLists]; }; - icetea = derive2 { name="icetea"; version="1.0.1"; sha256="11l0m6r6rrw8g4r7zabf6sy894sa9bqcsr6x7kbnk3hdmr3lcwfh"; depends=[BiocGenerics BiocParallel Biostrings csaw edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; }; - ideal = derive2 { name="ideal"; version="1.6.1"; sha256="0d3rym7lfnaqpr7dlcxq2mf0p2wh45y9glx5m3isf5z352y81bd9"; depends=[AnnotationDbi BiocParallel d3heatmap DESeq2 dplyr DT GenomicRanges ggplot2 GO_db goseq GOstats gplots IHW IRanges knitr limma pcaExplorer pheatmap rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; - idiogram = derive2 { name="idiogram"; version="1.58.0"; sha256="0m4p1ar2z7wj8zk24kiazwr8i55b0b6i7j03skqzcgy5jdv3jzyp"; depends=[annotate Biobase plotrix]; }; - igvR = derive2 { name="igvR"; version="1.2.0"; sha256="1g5q877hpwckf3m2qvgysvwa9ggxg99mbmk0vkqsyamqxh74pwx6"; depends=[BiocGenerics BrowserViz GenomicRanges httpuv rtracklayer VariantAnnotation]; }; - illuminaio = derive2 { name="illuminaio"; version="0.24.0"; sha256="1rdp9b4xlv91yzba7pd7k50s3nkljfxmdmyz5jl0j8ybhmpl6rns"; depends=[base64]; }; - imageHTS = derive2 { name="imageHTS"; version="1.32.1"; sha256="10syni3cfl1n4p7gkskkcd0vrfkzg95kjrr16hbvypndrfp3wmhg"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; - immunoClust = derive2 { name="immunoClust"; version="1.14.1"; sha256="0ncb6szwd5ghh5x3bi9d3dqmfgyjawhflsc1rxbmyf3qs67796my"; depends=[flowCore lattice]; }; - impute = derive2 { name="impute"; version="1.56.0"; sha256="08z0pj1dz5iq967nwj67qyka7ir7m5an2ggv7bsrlz3apzfsla33"; depends=[]; }; - intansv = derive2 { name="intansv"; version="1.22.0"; sha256="1gj6sxh84v5g7nriskyg7jx0z3kqmicymv53651cgr66wc86z2lm"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; - interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.20.0"; sha256="1zlxmj8wwn916xf7qkvpapsqg9i53bywn2z3xny3yj6jp9xmibff"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; - interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.20.0"; sha256="04xz3dkwan2s5ic1mwkdfnggm0l41mgqfagx160bcsrpkw6z7ark"; depends=[BiocGenerics shiny]; }; - inveRsion = derive2 { name="inveRsion"; version="1.30.0"; sha256="0qaxl6arlx2zki5gkic52b575ickh7mzwls70xyqj8342hyxhi30"; depends=[haplo_stats]; }; - ipdDb = derive2 { name="ipdDb"; version="1.0.0"; sha256="049hzzj2x7wwd4ybjbq6vrc4kg21fcx7yxj501lyyp1qddvvrmvs"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; }; - isobar = derive2 { name="isobar"; version="1.28.1"; sha256="0zh6qj9jjwp1wgwg9n47g01xxwdi8janiv3iy89a3jc62mm1ddpc"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; - isomiRs = derive2 { name="isomiRs"; version="1.10.1"; sha256="18fhm2w1j92sj7pw6hhi58slv4sni09mf10s9ihm2xphv10qysym"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics cluster cowplot DEGreport DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors SummarizedExperiment tibble tidyr]; }; - iterClust = derive2 { name="iterClust"; version="1.4.0"; sha256="12nm79j67ls330lnld1wf4xdjxnfi15yjd8x5ibppv9ccsq6vlrn"; depends=[Biobase cluster]; }; - iterativeBMA = derive2 { name="iterativeBMA"; version="1.40.0"; sha256="0x3fk3faslrcc24wrchdy57ip2nq49dr0l5yf99ihr1gnkfzjrsr"; depends=[Biobase BMA leaps]; }; - iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.40.0"; sha256="1k6pivwa69n1ppwvfdr90nlm7lw2kji2p1s6s35dc9463a6qyh7r"; depends=[BMA leaps survival]; }; - iteremoval = derive2 { name="iteremoval"; version="1.2.0"; sha256="0xmx4k6h8ii2mfqik5kkx7gwmhn4br8a7pnqv4bk9dbvphaqknk8"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; }; - ivygapSE = derive2 { name="ivygapSE"; version="1.4.0"; sha256="0r9j2r0n5hw75ylbc8scq070p4kazc4m9vrjcbxvfkyv22qppjr2"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; }; - joda = derive2 { name="joda"; version="1.30.0"; sha256="1v21j6maydhfxixfa27napp1k59f1jngz7p9hidijmm4nqbg4w60"; depends=[bgmm RBGL]; }; - karyoploteR = derive2 { name="karyoploteR"; version="1.8.8"; sha256="0hfv89383m5l4r3aswgscjl2r35b7k7wlgslj8il41grbzz3a55p"; depends=[bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors]; }; - kebabs = derive2 { name="kebabs"; version="1.16.0"; sha256="1ibxymqpiq85a5zs5wrngkyjqvwb4n5k2jxiics4mqv28pg34023"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; - keggorthology = derive2 { name="keggorthology"; version="2.34.0"; sha256="107wi6mlrz15pgwg7jrlb3q771v0yhxqph5i5c0h6v3yzr47xx15"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; - kimod = derive2 { name="kimod"; version="1.10.0"; sha256="081vanahyk3figp6jc9cjvq9lrn1mchc08wbw79f6k5sind4ic7z"; depends=[Biobase cluster]; }; - kissDE = derive2 { name="kissDE"; version="1.2.0"; sha256="0vqg7gjcj6z0v5ngj3z6zrmh5kdyk7hghj38yv7vp36miiqzrlw6"; depends=[aod Biobase DESeq2 doParallel DSS foreach ggplot2 gplots matrixStats]; }; - lapmix = derive2 { name="lapmix"; version="1.48.0"; sha256="12s3k81bysmmqc6r524jsx9yv0vyd5ppw1xs7myk2y7067355wxc"; depends=[Biobase]; }; - ldblock = derive2 { name="ldblock"; version="1.12.1"; sha256="01lf74pby7si2g3kgc10qzr6lkcbigqcgqs2j3anc38vzxv0zhwv"; depends=[BiocGenerics erma GenomeInfoDb GenomicFiles GO_db Homo_sapiens Matrix Rsamtools snpStats VariantAnnotation]; }; - les = derive2 { name="les"; version="1.32.0"; sha256="0iv4srhkirw2ix0a2bv44byydwxgihy027wahcskamm6dzk0k9lz"; depends=[boot fdrtool gplots RColorBrewer]; }; - levi = derive2 { name="levi"; version="1.0.0"; sha256="177zjvijca57f0hr4wb3zr83is3bgag5yfc07p9azic64ilwfqdb"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 shiny shinydashboard shinyjs testthat xml2]; }; - lfa = derive2 { name="lfa"; version="1.12.0"; sha256="1lvkycg4d7grqj7x5s3bcq2h4936kvd75r029zsa9mxdakc94kld"; depends=[corpcor]; }; - limma = derive2 { name="limma"; version="3.38.3"; sha256="08va8jggmv61wym955mnb1n31mgikrmjys7dl1kp5hp3yia8jg7l"; depends=[]; }; - limmaGUI = derive2 { name="limmaGUI"; version="1.58.0"; sha256="0fjq8qr5f6cv0bx4sfinnjiy0jc3dymlzhfkrxbd0c24fw35m3f4"; depends=[limma R2HTML tkrplot xtable]; }; - lmdme = derive2 { name="lmdme"; version="1.24.0"; sha256="069s419q5ca4py0c5r392kl08pmb6fnm76vsznqkbbl4g1yclyp3"; depends=[limma pls stemHypoxia]; }; - loci2path = derive2 { name="loci2path"; version="1.2.0"; sha256="1aps0yq7wg5gi9nacg5znfa5bf9i8ijf0qv5xn03s4rbzbwxwlfz"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; }; - logicFS = derive2 { name="logicFS"; version="2.2.0"; sha256="1kvwcm2b66hqlpf693s0cy8sr7sgxqvcdg1czwj7f77hf9ys3x40"; depends=[LogicReg mcbiopi survival]; }; - logitT = derive2 { name="logitT"; version="1.40.0"; sha256="1xmyixzihnv6svxhk76f695fs641p3zwj3k6xk5ds2989p6zkymy"; depends=[affy]; }; - lol = derive2 { name="lol"; version="1.30.0"; sha256="0z78jddb3cv5w26rm3bh27b3qqc2fbf3lv57xj8aq8fvya2w4ma2"; depends=[Matrix penalized]; }; - lpNet = derive2 { name="lpNet"; version="2.14.0"; sha256="1b3xsaq8ibsiz5895q6qqa632wlg08ca5sxm82ppm70fddpy26fd"; depends=[lpSolve nem]; }; - lpsymphony = derive2 { name="lpsymphony"; version="1.10.0"; sha256="0vnsf5x6gvd1k8h89al7r6xbgbxsjbxphr675czzwggz79zbvq7y"; depends=[]; }; - lumi = derive2 { name="lumi"; version="2.34.0"; sha256="1fpmjpgcy5n0hx9whn9m3jhjmciqq0l59nvy5addbq0a4wnjhx8q"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; - mAPKL = derive2 { name="mAPKL"; version="1.12.0"; sha256="1bp8xpcrz7d76lazp72p25rzp3gcmr2z4cyhcgbg678gpsp61lj9"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; - mBPCR = derive2 { name="mBPCR"; version="1.36.0"; sha256="0vsb87518x770li85jdkns1qsabmixsn8mvh96hamr0adcwvgzrz"; depends=[Biobase oligoClasses SNPchip]; }; - mCSEA = derive2 { name="mCSEA"; version="1.2.2"; sha256="0lan3ycvlg2z21wih4dnmiiq2al0jspqbv974pfak57s8h6vznrj"; depends=[fgsea GenomicFeatures GenomicRanges ggplot2 Gviz Homo_sapiens IRanges limma mCSEAdata S4Vectors SummarizedExperiment]; }; - maCorrPlot = derive2 { name="maCorrPlot"; version="1.52.0"; sha256="11gg32sj2iyd3l7hxlqlhgd8adcgsfdz7n5lypsz1d7d3y760f7y"; depends=[lattice]; }; - maPredictDSC = derive2 { name="maPredictDSC"; version="1.20.0"; sha256="00m792cgx3v6gp81axpqf48bdxkl8l2gnl6fvsx3xbsk4akm33p2"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; - maSigPro = derive2 { name="maSigPro"; version="1.54.0"; sha256="15bndkrwafj1vg2ik0s5003dzs65ibyhgz79ya5gry0b5h365qri"; depends=[Biobase MASS mclust venn]; }; - maanova = derive2 { name="maanova"; version="1.52.0"; sha256="1p1g5p2qflcgk24h1ww0nj4nnfas5pyg1caw2bgxrqyb161rl90x"; depends=[Biobase]; }; - macat = derive2 { name="macat"; version="1.56.0"; sha256="11jvvs3w1kiv2lvjwgzcxr5xy3m7c6b56bvhs8kiwf5lkqrqw6kn"; depends=[annotate Biobase]; }; - made4 = derive2 { name="made4"; version="1.56.0"; sha256="05bk877d81jjifj6rgrx0j2fhlsnmy8s093fnpqp7khrjwqh3zhn"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; - maftools = derive2 { name="maftools"; version="1.8.10"; sha256="0r6m258qmhq6qfylp6hc8bfqaix69w9s3d4xzaaz2n0448q4qf27"; depends=[Biostrings BSgenome cometExactTest ComplexHeatmap cowplot data_table ggplot2 ggrepel gridExtra mclust NMF RColorBrewer rjson survival wordcloud]; }; - maigesPack = derive2 { name="maigesPack"; version="1.46.0"; sha256="07rd63lifw4vmf2cxb7lwmnwpynv39ac0h2dd97dvjwqzj6kq1cs"; depends=[convert graph limma marray]; }; - makecdfenv = derive2 { name="makecdfenv"; version="1.58.0"; sha256="0djhh5kj4ymxjk1qhpx8kcy8cjzx3syx6na7v52aqhys0zssdbip"; depends=[affy affyio Biobase zlibbioc]; }; - manta = derive2 { name="manta"; version="1.28.1"; sha256="0lzwh3yi41hrqm25ili464n1cl22q7v00kgl20b412zfyx4rn7y5"; depends=[caroline edgeR Hmisc]; }; - mapscape = derive2 { name="mapscape"; version="1.6.0"; sha256="148b7g4qiczc215x9nrggjqzjbsd4wxwydjxsfbsmy51db7n4gp2"; depends=[base64enc htmlwidgets jsonlite stringr]; }; - marray = derive2 { name="marray"; version="1.60.0"; sha256="1sh7l3c28x6zhdv99c9x05ii2yxmh9alkazp98kdi4fdb23rlzky"; depends=[limma]; }; - martini = derive2 { name="martini"; version="1.2.0"; sha256="072k0wphk4nl096wvbfrn0v1sgryg74ay6r9jqci7pzmninc0kci"; depends=[igraph Matrix Rcpp RcppEigen Rgin S4Vectors snpStats]; }; - maser = derive2 { name="maser"; version="1.0.0"; sha256="08zfqzbryir2sf5a5bmdy63a9ix983kkn281flfbwm81694wx7pg"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; }; - maskBAD = derive2 { name="maskBAD"; version="1.26.0"; sha256="0nkc7s219b9vhc3fl01ji94pxls0r8li042k8lrq8jx1g940smh4"; depends=[affy gcrma]; }; - massiR = derive2 { name="massiR"; version="1.18.0"; sha256="1fsic9w4bkkmi177f1f8lk4835cs2y4r5dy5vf71nc89y4jg7h67"; depends=[Biobase cluster diptest gplots]; }; - matchBox = derive2 { name="matchBox"; version="1.24.0"; sha256="0whhbp49imvrl0a4xdmmbz8fz8vv9i19168smm7xq2p7wa1am364"; depends=[]; }; - matter = derive2 { name="matter"; version="1.8.3"; sha256="03hsgl0k48j458aa20s4xxrpslypllg74qf6yr9irx9h939hszwm"; depends=[biglm BiocGenerics digest irlba]; }; - mcaGUI = derive2 { name="mcaGUI"; version="1.30.0"; sha256="0id5zlpk8zdim8gmmh61dabirg52kmbi63dx316838idk4i06a5h"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; }; - mdgsa = derive2 { name="mdgsa"; version="1.14.0"; sha256="01yh036hy3jn1q76bz2whfdf2qjs5xra7570rf25fff824cbszdk"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; - mdp = derive2 { name="mdp"; version="1.2.1"; sha256="1rmkzjd2f7f1dnla8rlywhwih5lpi742br1gsrrl5i61lgy61fbl"; depends=[ggplot2 gridExtra]; }; - mdqc = derive2 { name="mdqc"; version="1.44.0"; sha256="0w4455xqkwwz8bhac36sxkqziq9pacp8n81zc3b1wwcwf95m2r6q"; depends=[cluster MASS]; }; - meshes = derive2 { name="meshes"; version="1.8.0"; sha256="0lc0mmvmrfzirqc0ydhzwdpq7d6rb8ffi8ka52qs6wc6nfqb6qg8"; depends=[AnnotationDbi DOSE enrichplot GOSemSim MeSH_db rvcheck]; }; - meshr = derive2 { name="meshr"; version="1.18.0"; sha256="12rwfqjpa9bzgrm3yqfz7h8v22icps8dr709lmp7k1jx9jbzp3gs"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db RSQLite S4Vectors]; }; - messina = derive2 { name="messina"; version="1.18.0"; sha256="1dhl6l5ids2ffsfbc9jk36ihrpsd161w9c1j93jvdvpa6130jl6f"; depends=[foreach ggplot2 plyr Rcpp survival]; }; - metaArray = derive2 { name="metaArray"; version="1.60.0"; sha256="049xwhycw2czzshvy5rc4plngaylwrj3ilk7dzynksn7av6sz4zd"; depends=[Biobase MergeMaid]; }; - metaCCA = derive2 { name="metaCCA"; version="1.10.0"; sha256="1h3xnrnlpbrjvrjpifm6i4kzyfgc2a0gnzpxya9lj105m9svpvca"; depends=[]; }; - metaMS = derive2 { name="metaMS"; version="1.18.1"; sha256="0ygci9hny7p90wf6inzw8qgbm8vl82d2n2wvcac5vdh8rsc4rdcp"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; - metaSeq = derive2 { name="metaSeq"; version="1.22.1"; sha256="00jwcgcx250v9glqxc1d0cvydn2jqzxxq62jmwskv87av68ppqbs"; depends=[NOISeq Rcpp snow]; }; - metabomxtr = derive2 { name="metabomxtr"; version="1.16.1"; sha256="1nz1higya3i7lbmqgxv5fa4nxwpm7b2fvsa69x52b36i0z70y7lc"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; }; - metagene = derive2 { name="metagene"; version="2.14.0"; sha256="09krnp862jz8mgjyp6v5ynvsrl4asfvzsvi21rj8af5b0ywkwvwg"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; - metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="2.2.3"; sha256="0dirj9xsn13jz572j0z37997s3nhgb3l1gqm67giarbp1h0nw20l"; depends=[ape Biobase Biostrings dbplyr DECIPHER dplyr lattice lazyeval magrittr RSQLite S4Vectors stringr]; }; - metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.24.1"; sha256="0zsb9vilmkvmx7vhw4074qgkxi5xd0kihzx2q5bi7l2zjd152y78"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; }; - metahdep = derive2 { name="metahdep"; version="1.40.0"; sha256="02xw6pb6688hhgq3213s55sb73qmd6xjfaqk7bz4ci7m4ilf6c2k"; depends=[]; }; - metaseqR = derive2 { name="metaseqR"; version="1.22.1"; sha256="0nrvm55jx25mwrdg9p52mlbvvcqcvkbg2z1i9g5fhb0c7llcrldx"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; - metavizr = derive2 { name="metavizr"; version="1.6.2"; sha256="18hcd11i4n6l8kf1i0a8zlx2bzr3964lijgbwvkg8bghy288n4jm"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; }; - methInheritSim = derive2 { name="methInheritSim"; version="1.4.1"; sha256="0cshckvhrvlq9wgcjk3z2bi1qfq1my947rwvdma5la8ydf3x1i5w"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; - methVisual = derive2 { name="methVisual"; version="1.34.0"; sha256="09ss0s5z950m6v2y037v8qwsp238w73302ls1xh9ps8gkz05a800"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; }; - methimpute = derive2 { name="methimpute"; version="1.4.1"; sha256="1xcparys2ifv2y5rp8ih558l8apnw5b3mjnkkc29szf38mzk9a1r"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; - methyAnalysis = derive2 { name="methyAnalysis"; version="1.24.0"; sha256="0afgaf3xl2dnpl86agbx44fiq4i5i96535p3hd9y845xdq5ymvnp"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; - methylGSA = derive2 { name="methylGSA"; version="1.0.4"; sha256="0zkq3cnir2n01syc8122wy8yznlal60lhi9a97f1yayc95mddl66"; depends=[AnnotationDbi clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b2_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg stringr]; }; - methylInheritance = derive2 { name="methylInheritance"; version="1.6.1"; sha256="0n11jkka37aqmirn73hl8kabilb220i1pv10i62jzq623sqpdsz9"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; - methylKit = derive2 { name="methylKit"; version="1.8.1"; sha256="1zcfwy7i10aqgnf7r0c41hakb5aai3s3n9y8pc6a98vimz51ly2z"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; - methylMnM = derive2 { name="methylMnM"; version="1.20.0"; sha256="0sd3vj58yfscngpcl9hys2nys3siq1h2ask5r8j6jx6yz3qs91xd"; depends=[edgeR statmod]; }; - methylPipe = derive2 { name="methylPipe"; version="1.16.0"; sha256="1qrvf0kf1948v2bhkxv979p6cr8mknmqkb04hz30bm8fqpmn1wfw"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; - methylumi = derive2 { name="methylumi"; version="2.28.0"; sha256="14p2qi18cprfvb2gxng1vm48c7zwh23h88q9qjgipj9xl5axsgw2"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; - methyvim = derive2 { name="methyvim"; version="1.4.0"; sha256="1scybf1hdzyvjmcbfbqpbwph38alp594lj3ggxcdgfxvjapq3rsb"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 ggsci gridExtra gtools IRanges limma minfi S4Vectors SummarizedExperiment superheat tmle]; }; - mfa = derive2 { name="mfa"; version="1.4.1"; sha256="0khilki6kp63lij5nfcl36j161aqndr385p15fnmvg38qql88px7"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; - mgsa = derive2 { name="mgsa"; version="1.30.0"; sha256="0b30hlqyx8aw8a9naln2m5k8lgkr9f9fgv1mwnww5xiwqdnbqfcw"; depends=[gplots]; }; - miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.6.0"; sha256="0gb7vg35wff0kckb6dqkggvshdy43q04f07niiqamnl71h59wjh7"; depends=[]; }; - miRLAB = derive2 { name="miRLAB"; version="1.12.0"; sha256="0vpvd93zrz4ihcinpwppc954585vjafmcpj1rpamqkyi2giyxldm"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots heatmap_plus Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl Roleswitch stringr SummarizedExperiment TCGAbiolinks]; }; - miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.10.0"; sha256="0wkkgqki7sv92adwzxay6xjyfx921ll8yh6aw2yp0mdgk9021zr8"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; }; - miRNApath = derive2 { name="miRNApath"; version="1.42.0"; sha256="1hrnnvp3y2q8ldmlq2pdyd3dpkqpyrhhgzqms3mc7djnv6ybv3cd"; depends=[]; }; - miRNAtap = derive2 { name="miRNAtap"; version="1.16.0"; sha256="1iy4gks0c0alg5bl1l40fdja6wffm0hjv40xvny9s1g036zmqca6"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; - miRSM = derive2 { name="miRSM"; version="1.0.0"; sha256="09z2ca1qpf2m3s5cc59y4xzcixlbl847c17lx1kmrakabqpsxy8i"; depends=[BiBitR BicARE biclust Biobase dynamicTreeCut fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MCL miRsponge NMF PMA Rcpp rqubic runibic s4vd SummarizedExperiment WGCNA]; }; - miRcomp = derive2 { name="miRcomp"; version="1.12.0"; sha256="17b6bq70d6ly09vma5mdlk54620jdxw6k4bwdyxgghyk7kwmd753"; depends=[Biobase KernSmooth miRcompData]; }; - miRmine = derive2 { name="miRmine"; version="1.4.0"; sha256="0zfdm5d6ifkq55v38xcjwzq19ifh6jgbg1pjp298mn15yjsjzfj1"; depends=[SummarizedExperiment]; }; - miRsponge = derive2 { name="miRsponge"; version="1.8.2"; sha256="0cpbhbjsb7sr3rjmc4cjn18j2rycma941qrwcjz8gyd4kgafd78f"; depends=[clusterProfiler corpcor DOSE igraph linkcomm MCL org_Hs_eg_db Rcpp ReactomePA survival varhandle]; }; - microRNA = derive2 { name="microRNA"; version="1.40.0"; sha256="1asrjljh4bxgzvbgnp72sqyqv13kvzbfdn3jy01v3l98dppjnwsf"; depends=[Biostrings]; }; - microbiome = derive2 { name="microbiome"; version="1.4.2"; sha256="0amla1m69axhlslbg1pbvl61qyxb6qjpdfd5g2j8b116h8xrmyab"; depends=[dplyr ggplot2 phyloseq reshape2 tidyr vegan]; }; - mimager = derive2 { name="mimager"; version="1.6.0"; sha256="097fv7wfj0wj0chijcl5v52lf35pc48va1ddsq6qii5xzi626cpd"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; - minet = derive2 { name="minet"; version="3.40.0"; sha256="0hb1k3p750qykmqjz59yjak5h8vmnln8zcp2dffjnqvwgn78i23w"; depends=[infotheo]; }; - minfi = derive2 { name="minfi"; version="1.28.4"; sha256="1sjwwqb0syngvj75saaky9y06hbxsawhhcmfvavzkhicxipafv7r"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; - mirIntegrator = derive2 { name="mirIntegrator"; version="1.12.0"; sha256="1vgl2kz4jahrw885gib7yaxwliij1ric9mmsad8v4zravw7d9knj"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; - missMethyl = derive2 { name="missMethyl"; version="1.16.0"; sha256="0axssdkyvdfpq7r47sckbbp7w8wa06j1ncskcn2w9f95nl1dbya5"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; - missRows = derive2 { name="missRows"; version="1.2.0"; sha256="0fgw36358z0lc0ppkpy49vw1p2k2w3ji01apff8gpkfb310zipwc"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; }; - mitoODE = derive2 { name="mitoODE"; version="1.20.1"; sha256="17cppvvvbpa4k62wrih3q61mrkc3145d5macq0sp6vh2vag61xdm"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; - mixOmics = derive2 { name="mixOmics"; version="6.6.2"; sha256="00mq3ikxnx8msgvciqjzis5n83klbzkp5nlk47hl41zksxnyknwm"; depends=[corpcor dplyr ellipse ggplot2 gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; }; - mogsa = derive2 { name="mogsa"; version="1.16.0"; sha256="14rl7md4bdpb24cxj5pmr196dy0amih8l4611kgwbrvdm9k13d3s"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; - monocle = derive2 { name="monocle"; version="2.10.1"; sha256="0shwkgqs93j2l5h36yyvb1lf724107cfjrmzp5fxfj1lqc0y61lf"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; - mosaics = derive2 { name="mosaics"; version="2.20.0"; sha256="1536y2fizmi7jafq7bhbv8bzpf5b97dfskpg9a7v4c9xv6isagnx"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; - motifRG = derive2 { name="motifRG"; version="1.26.0"; sha256="1wxww6i0jgyapqclcwy0zzf9kqjvrvylr89z7yhg1izi7jnw2fka"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; - motifStack = derive2 { name="motifStack"; version="1.26.0"; sha256="1c4w39ilc4ca4wgi1b6iypadkbxvqjw7k2br0d7q03niw9qjkhxf"; depends=[ade4 Biostrings grImport htmlwidgets MotIV scales XML]; }; - motifbreakR = derive2 { name="motifbreakR"; version="1.12.0"; sha256="191w8nzjm1lkgbzlhixnfvpgadq2mlhmwk7ai8xaadmxckrf494a"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; }; - motifcounter = derive2 { name="motifcounter"; version="1.6.0"; sha256="04i8s6r26kir9fcqbvy1wfxrav5imwj4r0sqvsf4vq2jxkwb4brr"; depends=[Biostrings]; }; - motifmatchr = derive2 { name="motifmatchr"; version="1.4.0"; sha256="1s65gr15iil1y8sa7wggrj5sb0mgw6vgs2qrmk1xka9zqjx957kv"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; }; - mpra = derive2 { name="mpra"; version="1.4.1"; sha256="0wwn5cix0npk8lhsmk9dzagnfrqcn9x22wzgf5kq3xk4gwaraqdw"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; }; - msPurity = derive2 { name="msPurity"; version="1.8.1"; sha256="00v9bgwjkgkwkpf5yq13snncayn76iyp0k6r7lbq1lhf5p4cxw6m"; depends=[DBI doSNOW fastcluster foreach ggplot2 mzR plyr Rcpp reshape2 RSQLite stringr]; }; - msa = derive2 { name="msa"; version="1.14.0"; sha256="1g0ny0hjnzwqh9kbp6n770vfdvxsl95vhiydjqasma2hz205plf9"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; - msgbsR = derive2 { name="msgbsR"; version="1.6.1"; sha256="0q7hz3ca4x0nagk9f65vni3qn5z08irmxc5344rgn9mscafchfbv"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; }; - msmsEDA = derive2 { name="msmsEDA"; version="1.20.1"; sha256="1jrlxgzh3kdr9nhr9qd7hi5ahg9r2589drhq4klkcrwvfy013j7b"; depends=[gplots MASS MSnbase RColorBrewer]; }; - msmsTests = derive2 { name="msmsTests"; version="1.20.1"; sha256="08w3hmmmhxx5dvki5sfgxrhdqfy1xdxcbnpy4nvszhgmyc18zjzp"; depends=[edgeR msmsEDA MSnbase qvalue]; }; - multiClust = derive2 { name="multiClust"; version="1.12.0"; sha256="0ddk1sl9zsc4dgrxasnqa2h341blirpwzygl89wh2k4ga0wsmw6q"; depends=[amap cluster ctc dendextend mclust survival]; }; - multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.0.0"; sha256="0aixi21zmj2lc54cmkqc9k596nll01nyxhpkkzx40lv7jihw6p1c"; depends=[BiocParallel BLMA data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare metap pbapply pheatmap qqman]; }; - multiMiR = derive2 { name="multiMiR"; version="1.4.0"; sha256="1mip48rcqk47sj5sdqi2rxcwsd6l6v3nssnnkx41mpx8amn3cigb"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; - multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.6.0"; sha256="0h7spx39c079mzpbnbg4fv7bfnrdqz95101zxd4cdsffjk5zrly8"; depends=[doParallel foreach SummarizedExperiment]; }; - multiscan = derive2 { name="multiscan"; version="1.42.0"; sha256="1h5b55j0m4znp9gpzqdv974vvxhlbskxy9m474g8y72q0zbri4gk"; depends=[Biobase]; }; - multtest = derive2 { name="multtest"; version="2.38.0"; sha256="0lq62jw81hz9k840969n5byj57pwd0jqga3hqvhb6abb3g10yz7k"; depends=[Biobase BiocGenerics MASS survival]; }; - muscle = derive2 { name="muscle"; version="3.24.0"; sha256="1v0n6ncq467kpfli498gddz0r6ilkhjfw0q9srl1gcknz5y2frsw"; depends=[Biostrings]; }; - mygene = derive2 { name="mygene"; version="1.18.0"; sha256="03knrfbqm9hr30l3s58jkqyl6sl83p1vf4zyahr1ld0qrw81pvx7"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; - myvariant = derive2 { name="myvariant"; version="1.12.0"; sha256="1vsp8m6rwyk09i0rg5j8w29vgn5hzz7fh8gc2fbjbg3icls26gn8"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; - mzID = derive2 { name="mzID"; version="1.20.1"; sha256="15yd4bdxprw3kg7zj2k652y3yr3si781iw28jqvnkm0gsc23rd0c"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; - mzR = derive2 { name="mzR"; version="2.16.2"; sha256="19fn58zl59kd0hsjjc6y975y9187nfls0028a4k3v0s9wfg5b3vn"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib zlibbioc]; }; - ncdfFlow = derive2 { name="ncdfFlow"; version="2.28.1"; sha256="1nabfa8nz6plw8w2xfla0xffqmxyk699dbv9615cazhf6vl6289f"; depends=[BH Biobase BiocGenerics flowCore flowViz Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; - ndexr = derive2 { name="ndexr"; version="1.4.1"; sha256="067x2sj3pnq3hrxjpw4y4qp9gimgymxik9zdqjkirix77h817682"; depends=[httr igraph jsonlite plyr tidyr]; }; - nem = derive2 { name="nem"; version="2.56.0"; sha256="02j5rm0h9bjghgba244k0acshbnhrr38ghvx6cmf8za8fw19k3v2"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; }; - netReg = derive2 { name="netReg"; version="1.6.0"; sha256="01qxq7zlbmvh0mazw069fm6bjw0ks90baj8y5i0jc7m101dsm2qi"; depends=[Rcpp RcppArmadillo]; }; - netSmooth = derive2 { name="netSmooth"; version="1.2.0"; sha256="1cz3rca9ig9jl8ddcadbij129v5rpb86ncfrdmfj4m9qy0krlyac"; depends=[cluster clusterExperiment data_table entropy Matrix scater SingleCellExperiment SummarizedExperiment]; }; - netbenchmark = derive2 { name="netbenchmark"; version="1.14.0"; sha256="1gc8dnma4pr1j9wq422x8xh89mvb15kyvjvv86fhhshvdisihngw"; depends=[c3net corpcor fdrtool GeneNet GENIE3 grndata Matrix minet PCIT pracma Rcpp]; }; - netbiov = derive2 { name="netbiov"; version="1.16.0"; sha256="0zg4wkf4z6yi84sdp4h8dg8cq5sm6m04abg15hm68y27vw42prs2"; depends=[igraph]; }; - nethet = derive2 { name="nethet"; version="1.14.0"; sha256="1xp08ad4lsmrjgvqydr85k4y0b57hcaxicndh4hz4plqswzl7qpf"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; }; - netprioR = derive2 { name="netprioR"; version="1.8.1"; sha256="1phdaklcwhv1rv94dvz4mcwi5f1b3gya7bwv7489hsx7pa149sac"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; - netresponse = derive2 { name="netresponse"; version="1.42.0"; sha256="16hgcjzvbsx1lj2aq8jkam926ykb06im06rr62z705x6hna8k4g0"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; - networkBMA = derive2 { name="networkBMA"; version="2.22.0"; sha256="12pl1hl1r2j3kvbr061xzzv5fmkh1g60j5ihvzi14gy8chvjk7wk"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; }; - nnNorm = derive2 { name="nnNorm"; version="2.46.0"; sha256="0fslid2ywqbx4d3c2gvhhsmkkkidgjnlr8jsd61qralcdln494wv"; depends=[marray nnet]; }; - nondetects = derive2 { name="nondetects"; version="2.12.0"; sha256="1wsckq31y6cxlgyg579zh6yk1sa1s0lczkvx29dbvy11hjnsgkm6"; depends=[arm Biobase HTqPCR limma mvtnorm]; }; - normalize450K = derive2 { name="normalize450K"; version="1.10.0"; sha256="0ab9g0k0y8lzqx8vvfwxy8yjmal4lgxf64fnz0923jss98czvk21"; depends=[Biobase illuminaio quadprog]; }; - normr = derive2 { name="normr"; version="1.8.0"; sha256="1yj9nnfzj522yr5nw0sm9l6cvk21w4vpxn0bayggs2wx5g03pbsj"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; - npGSEA = derive2 { name="npGSEA"; version="1.18.0"; sha256="199n898qn6799p6zk46vlz192zj0z10f9q0xfc129ickfa7zk6gf"; depends=[Biobase BiocGenerics GSEABase]; }; - nuCpos = derive2 { name="nuCpos"; version="1.0.1"; sha256="0waac65n10izn8a6r2rlgi1xwjdc1yxa0pwlnriwkzdg9hpszbdd"; depends=[]; }; - nucleR = derive2 { name="nucleR"; version="2.14.0"; sha256="19y2ars61gbzglqvfzj2xq08iw34vnjm3fzn4dx67r0ivnxncs34"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; }; - nucleoSim = derive2 { name="nucleoSim"; version="1.10.0"; sha256="09mls6rv9qw9w1g3avgj57pi2avg4pnlbcbg29da0szz0dbbb7yn"; depends=[IRanges S4Vectors]; }; - occugene = derive2 { name="occugene"; version="1.42.0"; sha256="0sqmnr571rx18mh9m9ivjp79bqn6dydzhh3h4xc7xxwqwwp0l4fa"; depends=[]; }; - odseq = derive2 { name="odseq"; version="1.10.0"; sha256="0936n8qzxcaxlqwpzh3dc2gnzh7q5cyrk4cif3vxb4hrlix8b1bv"; depends=[kebabs mclust msa]; }; - oligo = derive2 { name="oligo"; version="1.46.0"; sha256="1j9p22chnb09fp26xnlx5zmrxccg0q56ywgxfvbmm0s2jnr02nam"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; - oligoClasses = derive2 { name="oligoClasses"; version="1.44.0"; sha256="03kdxgrznx204y7pma1ca4bjgrhhhwfz2ia9radgkl70m447hz13"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; - omicRexposome = derive2 { name="omicRexposome"; version="1.4.1"; sha256="0jfyin051mwif6sxng7y51pc4gc1wxshfpy09zcj33j9cx2yabcw"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; }; - omicade4 = derive2 { name="omicade4"; version="1.22.0"; sha256="1bwfbzkq7p9h1njgaj15hk69cw9649kq5hwf2k8jf3spnbirp114"; depends=[ade4 made4]; }; - omicplotR = derive2 { name="omicplotR"; version="1.2.1"; sha256="1dj2n3y6rhrhiy36hpmmy468zbjcibq0f36lymz217iklh93m0lh"; depends=[ALDEx2 compositions knitr matrixStats rmarkdown shiny vegan zCompositions]; }; - omicsPrint = derive2 { name="omicsPrint"; version="1.2.1"; sha256="0ri8is6d9vl44l1l8hizxa7ysc0inq81kqjjdxr8x09q4xp2hyw0"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; }; - oncomix = derive2 { name="oncomix"; version="1.4.0"; sha256="00pwd0nbbdlv35p85h5kqybvvzz2833qx2jgprffg2bhmxvaky8w"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; }; - oneSENSE = derive2 { name="oneSENSE"; version="1.4.1"; sha256="0hipmgwy8wy7i8mc35vdkgfbqz6g2wcqczl78x9i41av4dacpqz1"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; - onlineFDR = derive2 { name="onlineFDR"; version="1.0.0"; sha256="1738wy4px32jzinj9311hvng887ys61dqqs3m3zi5cqkpwcs19hd"; depends=[]; }; - ontoProc = derive2 { name="ontoProc"; version="1.4.0"; sha256="08sgf142b8l4gdsap44b75jcxvwlcz19saqjrw9sg0307h509n77"; depends=[AnnotationDbi Biobase ontologyIndex S4Vectors shiny]; }; - openCyto = derive2 { name="openCyto"; version="1.20.2"; sha256="0fa39bpi26civ7dabxf7py6lydmkhss5gff6ykrbmwp85h9d2nsh"; depends=[Biobase BiocGenerics clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; - openPrimeR = derive2 { name="openPrimeR"; version="1.4.1"; sha256="0cmixmj1mnalr89c32ih5hf4v73qf4x73hzvbiw0mnz8niizaqgz"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr tinytex uniqtag XML]; }; - openPrimeRui = derive2 { name="openPrimeRui"; version="1.4.1"; sha256="163a8frs637yvm6vqhi7sxashkbdc61m8mb5lc6n0i98zicmaj4p"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; - oposSOM = derive2 { name="oposSOM"; version="2.0.0"; sha256="190sg040nxjja0phmw9k81s139756qsnk1pac3cby21ml6hwbr0j"; depends=[ape Biobase biomaRt fastICA fdrtool igraph pixmap Rcpp RcppParallel scatterplot3d tsne]; }; - oppar = derive2 { name="oppar"; version="1.10.0"; sha256="012ypy3z2dgm6ddmbrq3vyyf5yk9ac18gs733s70jv61z2bd1rlw"; depends=[Biobase GSEABase GSVA]; }; - pRoloc = derive2 { name="pRoloc"; version="1.22.2"; sha256="14psqkyiwghv51irngrc1r0h47dh8cjz4z1b9x6nas3a1wzbicc2"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; - pRolocGUI = derive2 { name="pRolocGUI"; version="1.16.0"; sha256="13z6zd7m7hsjvm52lgy9v8ypkr6gs190c26qs0yzq7s4vfq48db2"; depends=[Biobase dplyr DT ggplot2 MSnbase pRoloc scales shiny]; }; - paircompviz = derive2 { name="paircompviz"; version="1.20.0"; sha256="1iraq8n5q24zz3xdv15wiyhd5avz0yr6hh1mzygypp8bmhkgcixv"; depends=[Rgraphviz]; }; - pandaR = derive2 { name="pandaR"; version="1.14.0"; sha256="0jm5xxxynrh08l0iz0wj7jl120a6vsglppryjhl4mgv7cs5pdx9w"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; - panelcn_mops = derive2 { name="panelcn.mops"; version="1.4.0"; sha256="1ib6v4zkgj7qc5ncnjgsx0rwb7awbisd64p7zxah175zds33gxph"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; - panp = derive2 { name="panp"; version="1.52.0"; sha256="1vv7i3zykv48s0v4nvxaziixkkdl660166cg9fgvbxb8689c2cw7"; depends=[affy Biobase]; }; - parglms = derive2 { name="parglms"; version="1.14.0"; sha256="0mzd1x8xj6sjjm98dahip663zq3k3bm9jn2j60hsyvr18win2bkx"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; - parody = derive2 { name="parody"; version="1.40.0"; sha256="14rzpmmcdq9j19ydb9qksga6l06zdnb29qn13wjxlbn9l7mbfzy4"; depends=[]; }; - pathRender = derive2 { name="pathRender"; version="1.50.0"; sha256="17q2vs878nmjs1k2f11l66wmkjz8zxy9wbhsyg8aal83yzr65hkc"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; - pathVar = derive2 { name="pathVar"; version="1.12.0"; sha256="09ncdyamlhs24yyg7fnb77vchqxpxh6asmj32pxhpvkkkgq106p4"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; - pathifier = derive2 { name="pathifier"; version="1.20.0"; sha256="064q5nbxgyz4hx6h4f92w7vyd77pndmxadwa8cw9y5qzh9g29a5m"; depends=[princurve R_oo]; }; - pathprint = derive2 { name="pathprint"; version="1.12.0"; sha256="06lv35nx0d098idjnlcr5bziilwnpapbbcsdfrwglcibgqis9hzh"; depends=[]; }; - pathview = derive2 { name="pathview"; version="1.22.3"; sha256="1dw87ldd3awc8br61012iaifznby5qq3i8v333blqspfb4mnmjyy"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; - paxtoolsr = derive2 { name="paxtoolsr"; version="1.16.0"; sha256="0sa680x51kcsbmlrb54z8m1qn1pjyzx7k26pni17mfdzaw1q9jki"; depends=[httr igraph jsonlite plyr R_utils readr rJava rjson XML]; }; - pcaExplorer = derive2 { name="pcaExplorer"; version="2.8.1"; sha256="1af9yf4nnsn3wb93zb0agn2vr04ianhm85326fl6qm51pmjljswh"; depends=[AnnotationDbi biomaRt d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges knitr limma NMF pheatmap plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; - pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.26.0"; sha256="0rdj9043zdvfh2gwas13i6787kw01m1cr998prgf12n9l107v68s"; depends=[AnnotationDbi Biostrings ellipse]; }; - pcaMethods = derive2 { name="pcaMethods"; version="1.74.0"; sha256="0ik82s9bsdj4a1mmv0a3k6yisa92mxx7maf3dvip1r8gqlm3dyng"; depends=[Biobase BiocGenerics MASS Rcpp]; }; - pcot2 = derive2 { name="pcot2"; version="1.50.0"; sha256="0rj3wd9a917p20kr28cc8si7yjqdh9ddc3n58aih7f96v6qxzq4i"; depends=[amap Biobase]; }; - pcxn = derive2 { name="pcxn"; version="2.4.0"; sha256="0a4hs1rc3p3lx9r188fgfhly60l570qna5ydmkixci5pjvnijv4b"; depends=[pcxnData pheatmap]; }; - pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.46.0"; sha256="1fwkfyazqq9i51fq965xvxqmidmnzg9xxfk74abfaz8y0w4jamak"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pepStat = derive2 { name="pepStat"; version="1.16.0"; sha256="1msy1wcvp1d2sdddygnqkgzgldgpb6481wj0q0qvb8f2g47lghb7"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; - pepXMLTab = derive2 { name="pepXMLTab"; version="1.16.1"; sha256="03szrw113d90aigy1hr6ylxwc3ccqxinkznfxb3nrw1fzipqz6c4"; depends=[XML]; }; - perturbatr = derive2 { name="perturbatr"; version="1.2.1"; sha256="17dbgj2g4c2bzi3sljh1zsx6azfb02hs3fiha6k01x92fwi83vik"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; }; - pgca = derive2 { name="pgca"; version="1.6.1"; sha256="1j55i52lz6k6bmvxw8vvbynmka43bcd857rl2dc5li5h3c04ympg"; depends=[]; }; - phantasus = derive2 { name="phantasus"; version="1.2.1"; sha256="0nd4zfazkbny94s7jnvj8flnxdvhlv4878w0hklf0fnsyzgc9am9"; depends=[assertthat Biobase ccaPP fgsea GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix Matrix_utils opencpu pheatmap protolite rhdf5 Rook scales stringr svglite]; }; - phenoTest = derive2 { name="phenoTest"; version="1.30.0"; sha256="0m9ginyg2jda48ihkvalzs89xpn3bshnyli26s0mb91hhdjcn55c"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; }; - phenopath = derive2 { name="phenopath"; version="1.6.7"; sha256="1bx7v90r180kb8rybhlh26zmq7n3110z7xqyy3cczzp6jrlwycr8"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; }; - philr = derive2 { name="philr"; version="1.8.1"; sha256="1rdgz4x54m2wlqrhr4nn26q28gzmlivsppzjj8h8g6h1gy7iqsj5"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; - phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.6.0"; sha256="186580zsbbvjz1nck1nrnp81yfyll0rzpbfij127h26ghq49lccc"; depends=[matrixStats plyr]; }; - phyloseq = derive2 { name="phyloseq"; version="1.26.1"; sha256="13ap1jj6rh82f5x6x2cb29c6p3q3rfg86i0dzmj2f0lvsnhr9spw"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; - piano = derive2 { name="piano"; version="1.22.0"; sha256="0fkimnbgmsh3x1r138855glml876al9fbzzz03xw5cybh0rk1ghx"; depends=[Biobase BiocGenerics fgsea gplots igraph marray relations]; }; - pickgene = derive2 { name="pickgene"; version="1.54.0"; sha256="0lsyh1hlpnn7vxqh3ga69qs72wlsrn8hxnzvlv03ga9124kfmnr9"; depends=[MASS]; }; - pint = derive2 { name="pint"; version="1.32.0"; sha256="0ppb7hghv0152qs6zac4i69r0sjckl9hyw8skbb0ksqv785yxpxh"; depends=[dmt Matrix mvtnorm]; }; - pkgDepTools = derive2 { name="pkgDepTools"; version="1.48.0"; sha256="0bsrr3jya1nn694znbsq3zi4h099ak1jsak9fyyccd3icmcmk2x2"; depends=[graph RBGL]; }; - plateCore = derive2 { name="plateCore"; version="1.40.1"; sha256="15ffs6j5p8dfs75hc21rp3ngcrm3265h5a28vzax28p3850c3dy7"; depends=[Biobase flowCore flowStats flowViz lattice latticeExtra MASS robustbase]; }; - plethy = derive2 { name="plethy"; version="1.20.0"; sha256="1018bn55hppwrvj6i5yyzy7fscy1w5v616smpghmplbbycxv3gpi"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; - plgem = derive2 { name="plgem"; version="1.54.1"; sha256="1330635db3p8xm5y8fwrk1l37r6bgypsq70s3rx954i775zp6szg"; depends=[Biobase MASS]; }; - plier = derive2 { name="plier"; version="1.52.0"; sha256="1xg9c232z3vlaa356g1c7b4ysx2bkck5ywb57kim9d5bgbvbk83p"; depends=[affy Biobase]; }; - plotGrouper = derive2 { name="plotGrouper"; version="1.0.1"; sha256="0cshh7dm559w5bmlly293vzndbzq16vkfml3siy8g8w480i0nfxj"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; }; - plrs = derive2 { name="plrs"; version="1.22.0"; sha256="1xr6z9fdbdj8qyjlr1fw2mx30iqz1bcxcqs7snarc34qdzr088m5"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; }; - plw = derive2 { name="plw"; version="1.42.0"; sha256="1kbn1hhqnf2cmqxjvq4whaj4h7i4v7cbcybcspafy4wvmysjsjvd"; depends=[affy MASS]; }; - plyranges = derive2 { name="plyranges"; version="1.2.0"; sha256="12cc8pnlq1rq01dwia0994chflm184mp2yb983lz973fp0kpbhd2"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyr tidyselect]; }; - pmm = derive2 { name="pmm"; version="1.14.0"; sha256="1ld7bcw6vphm48k8sy07j3j02pxfz6wiwqbz94jblc93s121b3z7"; depends=[lme4]; }; - podkat = derive2 { name="podkat"; version="1.14.0"; sha256="0df21vdia2zl70niajwqfswbicwb2agarak7dyd7arp29xz9ivvf"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; }; - pogos = derive2 { name="pogos"; version="1.2.1"; sha256="1y0v5r3f75qy67pz96siahxi0xdrilqz04v9qjl1ry866nfzjlkg"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; }; - polyester = derive2 { name="polyester"; version="1.18.0"; sha256="0acwamzwhqbavv0pxah20230mlanncc71lwbbxwki948j1qvg3rp"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; - powerTCR = derive2 { name="powerTCR"; version="1.2.0"; sha256="16x8kzidv6d2zm61jw47dgr047ijfkm18xddkk70qxgkrqc0gdpa"; depends=[cubature doParallel evmix foreach magrittr purrr tcR truncdist vegan VGAM]; }; - ppiStats = derive2 { name="ppiStats"; version="1.48.0"; sha256="1aclxj5y32rca97qv5gqfgsq2aly35gs12jxbvwikwbw6hwvi6pn"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; - pqsfinder = derive2 { name="pqsfinder"; version="1.10.1"; sha256="061105p51shc8ipwrrjflaxdqsyna3hi1ivk1yx5878msvv9pkkx"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; - prada = derive2 { name="prada"; version="1.58.1"; sha256="0hasynlsbyvircf3njss8kvijkmrc0h7i5cch9x1c7zlsvz9ai6s"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; }; - prebs = derive2 { name="prebs"; version="1.22.1"; sha256="0b9x855sqrpiz1rdkl1hrflsg0x6fbdcakkh7602zf14fbbdvdyd"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; - predictionet = derive2 { name="predictionet"; version="1.28.0"; sha256="0hhxdvc30pdrpc96i4jvdn4q8gycdlk6hi9p8xdgmfin6pp375rk"; depends=[catnet igraph MASS penalized RBGL]; }; - preprocessCore = derive2 { name="preprocessCore"; version="1.44.0"; sha256="0ijyjqi8mxxf350dhvgp36swwww5ag7ac9a6r6ymihc5syjr4w4j"; depends=[]; }; - primirTSS = derive2 { name="primirTSS"; version="1.0.1"; sha256="05qi4dhazxfgqr5hzcbbbnlzh4ffqqz266bdxgwpmmi9ri3jw7gc"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; }; - proBAMr = derive2 { name="proBAMr"; version="1.16.1"; sha256="0bsg3g0vqmv5xqn98z9bfj6hjpcfs6zzpaiiih8y5yq8wdbsi3np"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; - proFIA = derive2 { name="proFIA"; version="1.8.1"; sha256="1y9d57nrd5zbdnis0wqzk6k1p74f2i8qidjn3rl5xydpvnbqdfh5"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; }; - procoil = derive2 { name="procoil"; version="2.10.0"; sha256="0bv9kq1jsviyxvnclsc47lfjpxwlvsk479bk65zg0qbi397a3cwl"; depends=[Biostrings kebabs S4Vectors]; }; - profileScoreDist = derive2 { name="profileScoreDist"; version="1.10.0"; sha256="0xfnava0bqpsqwzzw5nkwqkcajzacvifd3b2jm3qg5579myjprx4"; depends=[BiocGenerics Rcpp]; }; - progeny = derive2 { name="progeny"; version="1.4.1"; sha256="02z09rbzi305jrwzai8zayxi82563lxcaldp4r9pw564qkbl7pk7"; depends=[Biobase]; }; - prot2D = derive2 { name="prot2D"; version="1.20.0"; sha256="0ljggyj557zmbf51cgvq3sl42xqgqh3a2wayyd6s8501ww1xk7fg"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; }; - proteinProfiles = derive2 { name="proteinProfiles"; version="1.22.0"; sha256="1jjricjdc9l2lk7m48x3isrzmn8jxsy8x865ijnmqz9zlzgzz8zs"; depends=[]; }; - proteoQC = derive2 { name="proteoQC"; version="1.18.1"; sha256="0p2wc5lp7ls80lkjcr5f0zjiq0y9xdallg8yjhprb1cicwxdnd5g"; depends=[dplyr ggplot2 MSnbase Nozzle_R1 plotly plyr reshape2 rmarkdown rpx rTANDEM seqinr tidyr VennDiagram XML]; }; - psichomics = derive2 { name="psichomics"; version="1.8.2"; sha256="15v0vi348n2xjv0mxis5vbh3a7qzzsgl5ah597xb06dxqxn4q795"; depends=[AnnotationDbi AnnotationHub cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma miscTools org_Hs_eg_db pairsD3 plyr R_utils Rcpp recount reshape2 shiny shinyBS shinyjs stringr SummarizedExperiment survival XML xtable]; }; - psygenet2r = derive2 { name="psygenet2r"; version="1.14.0"; sha256="11vsh96pmbf4ypyszgz3yqr0y3q7rxxd61hx2xhwy4v82fq8il2f"; depends=[BgeeDB Biobase BiocManager biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; - puma = derive2 { name="puma"; version="3.24.0"; sha256="1mjl2zkf6kxcadb0pcp157hhq4dgrxzjvs5i5s8mfxx54d7i80ih"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; - pvac = derive2 { name="pvac"; version="1.30.0"; sha256="0r92vrsbvbmyqajcldnjfnyigq5ppsh3bgm5h1i299sr4q7m85iv"; depends=[affy Biobase]; }; - pvca = derive2 { name="pvca"; version="1.22.0"; sha256="0s45j854parwwp5f173p5m8f58n18fqdn4z4z7x2ap5f733fr483"; depends=[Biobase lme4 Matrix vsn]; }; - pwOmics = derive2 { name="pwOmics"; version="1.14.0"; sha256="0v5gsk82899i98b8kv95mj4qry0j8plbj7qb1qsl5k51hz79i5pz"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; }; - qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="1.0.4"; sha256="06scrbiwzz3nbl1lbhbrh9fgwv064h8ja05bl308931jlxr9fpgc"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr GenomicRanges ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer statmod stringr tibble tidyr]; }; - qcmetrics = derive2 { name="qcmetrics"; version="1.20.1"; sha256="0v09i2njk3l1am3vgmhn48hii7h4kzwdqz6hyb1ix8n9zc423rzs"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; - qpcrNorm = derive2 { name="qpcrNorm"; version="1.40.0"; sha256="0m67a0b3i5nmd2lxx9ga0p6223y9x0bpz2j8gvqzsjnkh4ix1z0g"; depends=[affy Biobase limma]; }; - qpgraph = derive2 { name="qpgraph"; version="2.16.0"; sha256="110krd6sf87qai60qf9ixgkc43i51xvfiqnzdmwk1na2qhda2sp8"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; - qrqc = derive2 { name="qrqc"; version="1.36.0"; sha256="1pdadzlfx5kbsyp79iqxdliilsnhvx1d9j4dj89pl8hgz4n1zyvz"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rsamtools testthat xtable]; }; - qsea = derive2 { name="qsea"; version="1.8.0"; sha256="0m6h75fvzg7chi2sasaqrddxgl27qymxim7j7j3wg0gizhm2w59l"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; }; - quantro = derive2 { name="quantro"; version="1.16.0"; sha256="1777gjgn855f04yv7hx70h9l8idmjzamkpazaq2cdr8qzhxwy2ib"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; - quantsmooth = derive2 { name="quantsmooth"; version="1.48.0"; sha256="0s7dwf4xkj6ab12ra0ibkn9myif174s476s8nkaz8x8a8yxlzmjn"; depends=[quantreg]; }; - qusage = derive2 { name="qusage"; version="2.16.1"; sha256="1jdslydj6nrwbysmjdp96iga93f5z56m2ilqgwwpcizzhlid25i3"; depends=[Biobase limma lsmeans nlme]; }; - qvalue = derive2 { name="qvalue"; version="2.14.1"; sha256="0kxavzm1j2mk26qicmjm90nxx4w5h3dxighzks7wzihay3k8cysc"; depends=[ggplot2 reshape2]; }; - r3Cseq = derive2 { name="r3Cseq"; version="1.28.0"; sha256="00gx50wlnq3dxybsj8fiwb0qmlyk9f9fddya7wckgs4yjb0y9lv4"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; - rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.22.0"; sha256="1zy72y9wiskwr4nymka3p9cw0zbgg0883422ysiijqkywz5cvawn"; depends=[data_table XML]; }; - rCGH = derive2 { name="rCGH"; version="1.12.0"; sha256="0ydd8685ly3kgvry09d0dc8lm6zl9355361bi7y6ra2v7sz4rvbj"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - rDGIdb = derive2 { name="rDGIdb"; version="1.8.0"; sha256="0rwgcra484hpbch4pxnqa7x0vw5kzabilr308w1f4vdi6ydrz3gk"; depends=[httr jsonlite]; }; - rGADEM = derive2 { name="rGADEM"; version="2.30.0"; sha256="1a3mvxabp7yb275cv1wr0rzyvjhnsaysk2hnmll4z4cci171z2j2"; depends=[Biostrings BSgenome IRanges seqLogo]; }; - rGREAT = derive2 { name="rGREAT"; version="1.14.0"; sha256="0fpi797byvplg73hinsnm07nqgknwb4cbcn0wdw3q178jmksb5j0"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; - rHVDM = derive2 { name="rHVDM"; version="1.48.0"; sha256="0mf74pi9p7kfl9c2hjkmvfzsdfq7sp6gpbxlinj3k3vlbavpkgyg"; depends=[affy Biobase minpack_lm R2HTML]; }; - rMAT = derive2 { name="rMAT"; version="3.32.0"; sha256="1305v5gsbwvy2z7r0gg4gq48xn9yxgbyk4jpjfxaqza49l5sf283"; depends=[affxparser Biobase BiocGenerics IRanges]; }; - rRDP = derive2 { name="rRDP"; version="1.16.1"; sha256="0wahgg5l640nyiznjx10gc6xds0bssw7cpapk844a7i9d7l8my2f"; depends=[Biostrings]; }; - rSFFreader = derive2 { name="rSFFreader"; version="0.30.0"; sha256="14x6xdhdavfrz3ylkys3dlzr8hwshc6v43lccvl4lfhc3jq8xhj5"; depends=[Biostrings IRanges S4Vectors ShortRead XVector]; }; - rTANDEM = derive2 { name="rTANDEM"; version="1.22.1"; sha256="1nfh0423jfzf44acqn3jlnl3561lkxwjxv6i7y3h5j4zi3309q2z"; depends=[data_table Rcpp XML]; }; - rTRM = derive2 { name="rTRM"; version="1.20.0"; sha256="1alz54x6vxsm7mhsasn1cviad0gbg3vlrzm3m5mf9rj61nlz6zgd"; depends=[AnnotationDbi DBI igraph RSQLite]; }; - rTRMui = derive2 { name="rTRMui"; version="1.20.0"; sha256="09rc2kvcpi7c0b0dmq07byrd5208szwm4nvisdr8xhnhcsxq8f51"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; - rWikiPathways = derive2 { name="rWikiPathways"; version="1.2.1"; sha256="090mf50r9r1xwvirxwr1p9cv410q8h5pawv9v5kbnmwqi2b6qvzd"; depends=[caTools httr RJSONIO XML]; }; - rain = derive2 { name="rain"; version="1.16.0"; sha256="02grbm9c8q34np24218myzv0zgkq4p37mynpkm6c6xncywijgcsi"; depends=[gmp multtest]; }; - rama = derive2 { name="rama"; version="1.56.0"; sha256="0ns6dczyj8zglrfni1i0sfiqhpcii5h6hdv8yjg0hkm29g2qjzd0"; depends=[]; }; - ramwas = derive2 { name="ramwas"; version="1.6.0"; sha256="19iqh994x28mninyfay6rkjib947w9wjhsz1ac528w9paqjyk0ha"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; - randPack = derive2 { name="randPack"; version="1.28.0"; sha256="03vi35c3mglpiqrkzgnspgxj42bz952ms9bq0cvy5sp6lh9f6l3l"; depends=[Biobase]; }; - rbsurv = derive2 { name="rbsurv"; version="2.40.0"; sha256="08sd8i68zgbbd8anh828yjdl9j19l7m66wdrpqsmgns4n2gwpg80"; depends=[Biobase survival]; }; - rcellminer = derive2 { name="rcellminer"; version="2.4.0"; sha256="1r627fhzzjvjzdj8y0cxr65csj023c1jwl04jnj2i3g2g4pzcicl"; depends=[Biobase fingerprint ggplot2 gplots rcdk rcellminerData shiny stringr]; }; - readat = derive2 { name="readat"; version="1.8.0"; sha256="0sg4dccxkyl7arlfhd0qmq1kx5f1sykvi822ssh0brp8yjj1hx53"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_sets assertive_types Biobase data_table dplyr magrittr openxlsx reshape2 stringi SummarizedExperiment testthat tidyr]; }; - reb = derive2 { name="reb"; version="1.60.0"; sha256="1a62sfl0hw9nqw25b7hv76m9bn5l56d0sin1ii9s4qa2hj67nwxy"; depends=[Biobase idiogram]; }; - recount = derive2 { name="recount"; version="1.8.2"; sha256="0cnvbbpgijx30p7ma2gi508nvi8w7cli29p9af6lvn3q395fs9ya"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; - recoup = derive2 { name="recoup"; version="1.10.1"; sha256="0s4lhxffaai3l0rs4h62zcn0y5kxnmqxvcdnin726q3sc75b7h7l"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; }; - regionReport = derive2 { name="regionReport"; version="1.16.1"; sha256="1c4yf6nda4i9h4mapskfnxrrzgv5ic8bkbwyssd650vx840agj99"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; - regioneR = derive2 { name="regioneR"; version="1.14.0"; sha256="19la74swgzxp90z2nr3pzsgkxd7wp70zl6i2ipv3plg841f6k5zd"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; - regsplice = derive2 { name="regsplice"; version="1.8.1"; sha256="1b5byldkilqshrhdqzgryjasz0m7545x4pa7vy1gk8h91amk52g8"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; - restfulSE = derive2 { name="restfulSE"; version="1.4.1"; sha256="00l2j1plx5bfjici3zp3v7yl8dzhdrkjpqi3wbf39y1l816wmpxx"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; }; - rexposome = derive2 { name="rexposome"; version="1.4.0"; sha256="1i0c97lfl18s647l36y0wpjd516viysfcybyp6fpkn8j04v7zxg6"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; }; - rfPred = derive2 { name="rfPred"; version="1.20.0"; sha256="07fw3y7jsk6yzqsq521r2d7mckyn7b167y9sc9r6zqsixj9g3fa1"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; - rgsepd = derive2 { name="rgsepd"; version="1.14.1"; sha256="1my5mhja9qvxl1kwxynf77vawgnk4hmnl4hdrry3x325hpyd2sir"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; - rhdf5 = derive2 { name="rhdf5"; version="2.26.2"; sha256="10zkw3k13wmvyif417gplyf6rwp2gpkjasw97lhwv2f9i32rry9l"; depends=[Rhdf5lib]; }; - rhdf5client = derive2 { name="rhdf5client"; version="1.4.1"; sha256="1pbdwrzwa7r65wkcw821khnvcjy1rbx4vm8rln5srkra5zgmjjhx"; depends=[DelayedArray httr R6 rjson S4Vectors]; }; - riboSeqR = derive2 { name="riboSeqR"; version="1.16.0"; sha256="1nacsbsz77fw4a10nqj2ncsf25q3aaa0gd5w1q0ray2prx7qmlqb"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; }; - rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.40.1"; sha256="13fa822z9mmidq30b4ar7xqj7qjkkdp6ih8j0rn6hc5gjhsqy6sh"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; - rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.12.0"; sha256="0n4jpd9aqbc14wsi8k1vqhdaz7gp6nn7qr3nk3s783q293rjq1m1"; depends=[RColorBrewer]; }; - roar = derive2 { name="roar"; version="1.18.0"; sha256="15650s9vs7dvmqpvrs4xwn6j4kh14yqsx4daqyhhxxr68kn8mklw"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; - rols = derive2 { name="rols"; version="2.10.1"; sha256="02cqiwbrxrhdc3pbq8vr1aasbark51gyf6y7i5z6lxng20sx2l1b"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; - ropls = derive2 { name="ropls"; version="1.14.1"; sha256="1g1r96qmc4j1ynsscglfznm51598m95aiwc2qcawv50g02byzsbv"; depends=[Biobase]; }; - rpx = derive2 { name="rpx"; version="1.18.1"; sha256="14w96lwrx0h1v7pijva2gxwwxsb2lq4cnjaf26wx6wbjw28cni1l"; depends=[RCurl xml2]; }; - rqt = derive2 { name="rqt"; version="1.8.0"; sha256="08kics4hq4y23ydilafylm2rmbnh88hj02rrd5bbl5685as724vn"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; - rqubic = derive2 { name="rqubic"; version="1.28.0"; sha256="0va7263mxij13qyjmqrv9hxbgxig17hjw1617v0gzrcprs978735"; depends=[biclust Biobase BiocGenerics]; }; - rsbml = derive2 { name="rsbml"; version="2.40.0"; sha256="04brk985cdf6psr8ixkqahg9nmb7lrv1jfy0j1c84l2znskya77f"; depends=[BiocGenerics graph]; }; - rtracklayer = derive2 { name="rtracklayer"; version="1.42.2"; sha256="1c76g6h9lx2nm7dvb2zp9dmrpk3vanx3zaz6q9clggpj7yj5lmjd"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; - runibic = derive2 { name="runibic"; version="1.4.0"; sha256="1s1zbcbfxbchrh8h9602n5gh8ji8zqll9kfd4wg3w3668ckv7vx3"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; - sRAP = derive2 { name="sRAP"; version="1.22.0"; sha256="0qgskdizjh8z15qx4lvrdy5rg7h20hdg454n2wqvpmrk6wvp0ylp"; depends=[gplots pls qvalue ROCR WriteXLS]; }; - sSeq = derive2 { name="sSeq"; version="1.20.1"; sha256="08f59qg96qkndrlkdyk3i495i00gcx5kj1jcdy6zqkm9j7km88y2"; depends=[caTools RColorBrewer]; }; - safe = derive2 { name="safe"; version="3.22.0"; sha256="0is94jnljq0lsqiyvy91bzkv7xig35q97cjwziszxr9gacizyqay"; depends=[AnnotationDbi Biobase SparseM]; }; - sagenhaft = derive2 { name="sagenhaft"; version="1.52.0"; sha256="0rx7vkm19m18wvyawypp20m1ib7wi8yrmrpj1fg0f15yf9nfiwjg"; depends=[SparseM]; }; - samExploreR = derive2 { name="samExploreR"; version="1.6.1"; sha256="0qgqjd0s4j722z621gi6nggg1m2a123k1rmmxrad01hpwya5magd"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; }; - sampleClassifier = derive2 { name="sampleClassifier"; version="1.6.1"; sha256="07aj8rmyvckxngy8y54qqzb85jn6k76l63n0jmdy2c50cizw53l5"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; - sangerseqR = derive2 { name="sangerseqR"; version="1.18.0"; sha256="1dw3s011w0pir3i9zz3b62qx4frwkw541k569w1qhl0z66qidmgz"; depends=[Biostrings shiny]; }; - sapFinder = derive2 { name="sapFinder"; version="1.20.1"; sha256="1yg99gibx8nc8r873y26cbcm5bjh008rhszxykpdbbgl8xfsclv3"; depends=[pheatmap Rcpp rTANDEM]; }; - savR = derive2 { name="savR"; version="1.20.0"; sha256="13bwq2a2pygdkmhrcmvz525wsi5i01j911711zgs6x93wj20b2w7"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; - scDD = derive2 { name="scDD"; version="1.6.1"; sha256="0dp2awajd5281dwpbs0wb8ij2pq9l60p0b80xhxrb41m5qybcri8"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; }; - scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.2.1"; sha256="04bk4kzs42mi022qr8whngkqxapngnvpxifd0m60r57skz3v6yqa"; depends=[dplyr ggplot2 magrittr rlang tibble]; }; - scPipe = derive2 { name="scPipe"; version="1.4.1"; sha256="1kl1ik1wd3cq7h2njzdnzs9r26qnim4r63c86pfbfymz23n4aqns"; depends=[AnnotationDbi BiocGenerics biomaRt dplyr GenomicRanges GGally ggplot2 glue hashmap magrittr MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib robustbase rtracklayer S4Vectors scales SingleCellExperiment stringr SummarizedExperiment testthat zlibbioc]; }; - scater = derive2 { name="scater"; version="1.10.1"; sha256="0rijhy7g5qmcn927y1wyd63la1fhyar9fv1hccsqd23jd98yc55a"; depends=[beachmat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats dplyr ggbeeswarm ggplot2 Matrix plyr Rcpp reshape2 Rhdf5lib S4Vectors SingleCellExperiment SummarizedExperiment viridis]; }; - scde = derive2 { name="scde"; version="2.10.1"; sha256="1n1r08wqx1bds7lwz2bbksw5l084cmcbgs03jr8s2l92z43kqmm6"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; - scfind = derive2 { name="scfind"; version="1.4.1"; sha256="07lzjqxvdjjzli8ibqvlndgf9n1x477q1pniv91ynrh6jc8dz8cb"; depends=[bit dplyr hash Rcpp reshape2 SingleCellExperiment SummarizedExperiment]; }; - scmap = derive2 { name="scmap"; version="1.4.1"; sha256="1nil8kylf2px6nqjh4lg3fm2mw7j0isynvc6w0lycwj34rzjx3q4"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scmeth = derive2 { name="scmeth"; version="1.2.2"; sha256="19z26ld4fa22ry2pc8nrwx6042im1w4wpkfi9hmgp6bi92aa0vs5"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; }; - scone = derive2 { name="scone"; version="1.6.1"; sha256="0l1x4cjnfjbpx6k55sjqx03555daa6v63rq0rg6b7jpz8xxzwa7p"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; }; - scoreInvHap = derive2 { name="scoreInvHap"; version="1.4.0"; sha256="03d7pny3qkcs279869yry8rkw7js3xyrc8b7p4i7hlpzd44x25a3"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; }; - scran = derive2 { name="scran"; version="1.10.2"; sha256="07mgilr3gq3lnrm1fjm9zhz4w7970bjhsykln1drqy9gkzj5sn7g"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel DelayedArray DelayedMatrixStats dynamicTreeCut edgeR igraph limma Matrix Rcpp Rhdf5lib S4Vectors scater SingleCellExperiment statmod SummarizedExperiment]; }; - scruff = derive2 { name="scruff"; version="1.0.3"; sha256="0ckqlmdclpfbm4y32h9625wzh7g1bx6gx2n460m2kqig9r17cfkl"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes plyr Rsamtools rtracklayer S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment]; }; - scsR = derive2 { name="scsR"; version="1.18.0"; sha256="11mf5kv8mk1nlfxd081a7dx1v60yf94cg46b5bjflidp3qhrsi9g"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; }; - segmentSeq = derive2 { name="segmentSeq"; version="2.16.0"; sha256="0pljd8hn2vxcsh22wmv53a7wkw3cdxpdv8q4ksfj5mvasa2mmkvi"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; - semisup = derive2 { name="semisup"; version="1.6.0"; sha256="0lizf5x3abv4g8j4jxmsbbdiqj4f4gybc3jvw7zz12bd3fsj3c1i"; depends=[SummarizedExperiment VGAM]; }; - seq2pathway = derive2 { name="seq2pathway"; version="1.14.0"; sha256="1zr6z9kgsvlcvb6fw2r39kx4jm3dxlyv7z5l9p0lkdykfnm313y8"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; - seqCAT = derive2 { name="seqCAT"; version="1.4.1"; sha256="1qn5l66qipclmcdnfy569px5wrji0mzmfgg2h6ngi94333649lxv"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges lazyeval S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; - seqCNA = derive2 { name="seqCNA"; version="1.28.0"; sha256="1qf76zslj54g6bxll5bi9kqkph1hb5b1b2yg9qr34ywiq4cw7i8i"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; - seqLogo = derive2 { name="seqLogo"; version="1.48.0"; sha256="022vr9ydwcivs7rw7kwj73gfk5gc7ckwa1q66vhd4kw9ylh70v68"; depends=[]; }; - seqPattern = derive2 { name="seqPattern"; version="1.14.0"; sha256="0di83qi83mrlw7i12khsq55d03hlazcywaa9m9pki1sfhafpq733"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; - seqTools = derive2 { name="seqTools"; version="1.16.0"; sha256="0dcql2pmgpaa5vin1zzhx472qm90rw962pd3pw32ispn02yw0f2l"; depends=[zlibbioc]; }; - seqbias = derive2 { name="seqbias"; version="1.30.0"; sha256="0jwlwqa1z2scnaqkrz5hmmakrjaajf4dwd875s7pswvacygiy859"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; }; - seqcombo = derive2 { name="seqcombo"; version="1.4.1"; sha256="0046www9rl5lswcjn6friijd5plj0p7bfg0y0qzqsz7gqpm3nj58"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; }; - seqplots = derive2 { name="seqplots"; version="1.20.1"; sha256="0hp3x8gdw65wc73hc1rcxbaqypq2zd50axsvcviqfgdv2dcb2ph7"; depends=[BiocManager Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; - seqsetvis = derive2 { name="seqsetvis"; version="1.2.1"; sha256="0x5410b3qwqn34lzs1x75ldlv6xmvdbjyxg8ja0gyg4hz5bc4vaj"; depends=[data_table eulerr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma png RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - sesame = derive2 { name="sesame"; version="1.0.0"; sha256="01qxdnpkilxv18fpl3rizxri2l7crs62z8nd7ywhxfm6g4ch5l1z"; depends=[DNAcopy GenomicRanges ggplot2 illuminaio IRanges MASS preprocessCore R6 randomForest S4Vectors sesameData wheatmap]; }; - sevenC = derive2 { name="sevenC"; version="1.2.0"; sha256="1p2xkv0n8hl9s4dlg54wgry73vnnlzylwximhan2ymnp3hgbg4j0"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; }; - sevenbridges = derive2 { name="sevenbridges"; version="1.12.5"; sha256="15rvjlv7abcic06sbvhyy4ii6cccc06xiyk45qk638n279ixl7aa"; depends=[curl docopt dplyr httr jsonlite objectProperties S4Vectors stringr uuid yaml]; }; - shinyMethyl = derive2 { name="shinyMethyl"; version="1.18.0"; sha256="0dzg1idkdy4x9h3z5yashrb03ad8ncjxz5j05jlaxx6k4aa7z8j8"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; - shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.20.1"; sha256="0lz4jr96g20fbrd34f9km6rj08yb2y09gp7zxnm0inlpdkvb4dby"; depends=[mixtools rTANDEM shiny xtable]; }; - sigFeature = derive2 { name="sigFeature"; version="1.0.0"; sha256="0kjf4ss0baq4p7nn305szpvpdssagndxjmggdgfm6mfjsgfi5nj1"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; }; - sigPathway = derive2 { name="sigPathway"; version="1.50.0"; sha256="0pygrla2q2151981gshzv51jnj60h1df3vby5gsxqvxn2pdr4bv3"; depends=[]; }; - sigaR = derive2 { name="sigaR"; version="1.30.0"; sha256="1vlmd6rqdhz9vzvjidxrq7k9vbbp1c82qspkmdxd9nkycyjjp5cg"; depends=[Biobase CGHbase corpcor igraph limma marray MASS mvtnorm penalized quadprog snowfall]; }; - siggenes = derive2 { name="siggenes"; version="1.56.0"; sha256="0cjlb5r04x15xkhk00i3wvpx21kj0k29pn0mj3whwqk31zznnk1b"; depends=[Biobase multtest]; }; - sights = derive2 { name="sights"; version="1.8.1"; sha256="14xch1qaqs4wcwgpys916r2ih3c150my1fqg9qr9qws9m1gbf7mn"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; - signeR = derive2 { name="signeR"; version="1.8.0"; sha256="1qpaa8ag8lv9s7340fdk3k3qc2jyq4r8268rvxb038zdrv7nzvv4"; depends=[BiocGenerics Biostrings class GenomicRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; - signet = derive2 { name="signet"; version="1.2.3"; sha256="1qzj0mn5jlijrnk9wi5mqq3xj4c8jmb5vjm7q4ww8wiqmzaq41mm"; depends=[graph igraph RBGL]; }; - sigsquared = derive2 { name="sigsquared"; version="1.14.0"; sha256="1y6h3z5mnww2f26hw4a09qiwpgij89bixf3ak5b253apkwd4bpi9"; depends=[Biobase survival]; }; - similaRpeak = derive2 { name="similaRpeak"; version="1.14.0"; sha256="0wf24nk2vibspqdkgw1a55xhnxs1ygshi548ms0lswkprrqcllg2"; depends=[R6]; }; - simpleaffy = derive2 { name="simpleaffy"; version="2.58.0"; sha256="0bry0d2vw0w2rrpnmfm1kl5v4rdclypmy33jvs9l43vd6vx2ra9s"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; - simulatorZ = derive2 { name="simulatorZ"; version="1.16.0"; sha256="19xjhrjwxlpygvv7xs752jsvdnqwzj742jkwzsz2nzwkixkw41hf"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc SummarizedExperiment survival]; }; - sincell = derive2 { name="sincell"; version="1.14.1"; sha256="0id0m6pkx7myg32m5ydwjhmhw5ighlzpi2hksp23sb0ji02y7iyv"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; - singleCellTK = derive2 { name="singleCellTK"; version="1.2.3"; sha256="1n0gxrj7wshzxpqwsmsicrhdf4q45afywqdc59yy2fxm440s0w50"; depends=[AnnotationDbi ape Biobase circlize cluster colourpicker ComplexHeatmap data_table DelayedArray DESeq2 DT enrichR ggplot2 ggtree gridExtra GSVA GSVAdata limma MAST matrixStats multtest plotly RColorBrewer reshape2 Rtsne S4Vectors shiny shinyalert shinycssloaders shinyjs SingleCellExperiment SummarizedExperiment sva]; }; - singscore = derive2 { name="singscore"; version="1.2.2"; sha256="0a32k23l26vjgag7vgv21n9vl8qjy6asrq7ms22wiw9lmg2qkyyc"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel ggsci GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape SummarizedExperiment tidyr]; }; - sizepower = derive2 { name="sizepower"; version="1.52.0"; sha256="082hfzw8348fra6fr1gli5cqjnrg3bgyx28ccy66jzxvrijm2qfl"; depends=[]; }; - skewr = derive2 { name="skewr"; version="1.14.0"; sha256="09132dwp8h3wdrf0agyc0vmby5z7c2hd3px4jrp9vgi2x1849mvn"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; }; - slalom = derive2 { name="slalom"; version="1.4.1"; sha256="0kb4y590cdph90k27av45jy889i3s1jarlhj57lyg8g14sr9sxq6"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; - slingshot = derive2 { name="slingshot"; version="1.0.0"; sha256="0nrqzsjwyk78cahw21x4i5lqac7h85k6nrq045nq4jmxyc977li3"; depends=[ape clusterExperiment igraph matrixStats princurve rgl SingleCellExperiment SummarizedExperiment]; }; - slinky = derive2 { name="slinky"; version="1.0.2"; sha256="1bjs41p3a7ggk6brj2hih84p4qi8qd398xzrh1r8lrdwjy1cm6yl"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; }; - snapCGH = derive2 { name="snapCGH"; version="1.52.0"; sha256="15fx1ryc6ab1aia768wpp8zhggfz2l9vildhkjh8chwaam1qd610"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; - snm = derive2 { name="snm"; version="1.30.0"; sha256="1qjd7g6c03rygp95cpry1m3yi83lyd57zp94whaymfriz39dx2i9"; depends=[corpcor lme4]; }; - snpStats = derive2 { name="snpStats"; version="1.32.0"; sha256="1pplx4pf9bqi7v5v1l74yknc1s61carvbqkf327ky7vbvp0bck33"; depends=[BiocGenerics Matrix survival zlibbioc]; }; - soGGi = derive2 { name="soGGi"; version="1.14.0"; sha256="0v0hvxadqsmscb8h0zy8xi4336pxha2vj5xk03ms81734jaj6adj"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.6.1"; sha256="1znhv5j4dijwiq5rdslvgrmzdh0cbc6mnx41a5njx9zkfgrfkw6j"; depends=[MASS MCMCpack optparse tmvtnorm]; }; - sparsenetgls = derive2 { name="sparsenetgls"; version="1.0.1"; sha256="01apq9p2hqivc0va5rpl3k90ipgr1i9a228r6b8wygxxy62dqphw"; depends=[glmnet huge MASS Matrix parcor]; }; - specL = derive2 { name="specL"; version="1.16.1"; sha256="12g6hp2x89ydv1ip88dmn48wgawhrpn39sfyrf59pw638gy4g4fl"; depends=[DBI protViz RSQLite seqinr]; }; - spikeLI = derive2 { name="spikeLI"; version="2.42.0"; sha256="055zbrbh6wf3vvnc9p8px2ffz9wdhdg0h96260r7c72ax3v6wi5g"; depends=[]; }; - spkTools = derive2 { name="spkTools"; version="1.38.0"; sha256="0rm2vlzid3wjm1g1kzmjklga1gcf852aznhxb1xr50v8drivkkz9"; depends=[Biobase gtools RColorBrewer]; }; - splatter = derive2 { name="splatter"; version="1.6.1"; sha256="1kw9shzqwph44q2fksgp79mrjq23j3806clc4xydw3ys2w4kspj8"; depends=[akima BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats scales scater SingleCellExperiment SummarizedExperiment]; }; - spliceSites = derive2 { name="spliceSites"; version="1.30.0"; sha256="1j40awy9irx53d1cdsx52pnxirjrrvgsj9zx5qhl2556ca65l26n"; depends=[Biobase BiocGenerics Biostrings doBy IRanges seqLogo]; }; - splicegear = derive2 { name="splicegear"; version="1.54.0"; sha256="0phpkgjkc4c8lfr8xsciqyz7imsjpc3sxwsh95glxhrsm7i2mnip"; depends=[annotate Biobase XML]; }; - splineTimeR = derive2 { name="splineTimeR"; version="1.10.0"; sha256="15dzhijkhpy7d8hwif59bic83fk6fnyjpp4qi7y7vwq139j6yaj2"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; - splots = derive2 { name="splots"; version="1.48.0"; sha256="0s10ha17p4yf6id0h0r0a2fk992jp4ah7v8ani689zy6pcc0w34d"; depends=[RColorBrewer]; }; - spotSegmentation = derive2 { name="spotSegmentation"; version="1.56.0"; sha256="06b4dwjll21i13ag5f2si5499gc6h63b5rnlz372pg95idwxsqbh"; depends=[mclust]; }; - srnadiff = derive2 { name="srnadiff"; version="1.2.1"; sha256="1cm2xjj0wd6ll45aa1gq4lzg49sr4v3zni3x0mgma6pkj2prcbwf"; depends=[BiocParallel BiocStyle DESeq2 devtools GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - sscore = derive2 { name="sscore"; version="1.54.0"; sha256="0anpfqvv6as5i28bb0i2h86p51m42ch4gzap5lcxia97lzvxh210"; depends=[affy affyio]; }; - sscu = derive2 { name="sscu"; version="2.12.0"; sha256="0y41krw0r0kmlp32b7cmlwf5qpncha8j357mx9sr3zvm52dphlpp"; depends=[BiocGenerics Biostrings seqinr]; }; - ssize = derive2 { name="ssize"; version="1.56.0"; sha256="13bc5hbnqqxr16pqw0waq29mpgrf4sys4kg63np2a4hpc6l2nrqk"; depends=[gdata xtable]; }; - ssviz = derive2 { name="ssviz"; version="1.16.1"; sha256="01wq3y9xf4g5d2df6j2cckwk9rm1y6ya39g33c0m13jk3xrxvcwi"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; - staRank = derive2 { name="staRank"; version="1.24.1"; sha256="08pac19nsyb8cfwbsc31m8daiig8p1px4y4rjc00ypvari2hnl2c"; depends=[cellHTS2]; }; - stageR = derive2 { name="stageR"; version="1.4.0"; sha256="063mprdjjvys09cxlgrd930r96i470z30h00pf0h15g5h4w02jak"; depends=[SummarizedExperiment]; }; - statTarget = derive2 { name="statTarget"; version="1.12.1"; sha256="19b8b00kcd6p9b7g4n3jaf8z80fz6y5d7bil8m8bj7ldr2l8dqr0"; depends=[impute pdist pls plyr randomForest ROC rrcov]; }; - stepNorm = derive2 { name="stepNorm"; version="1.54.0"; sha256="16sn793zj06dh69cwzx3vfjkx4gs3dy6x0apyh01vwhnqkani4vl"; depends=[marray MASS]; }; - strandCheckR = derive2 { name="strandCheckR"; version="1.0.0"; sha256="0pmw6iwynpy6mdfh8mb939100715mpwy458i6w6sw1pjghlykrzq"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - subSeq = derive2 { name="subSeq"; version="1.12.1"; sha256="151fa343n1w7mbrhqcf2f2bhh0s8km0a8lcx534avi1mnp539ql9"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; - supraHex = derive2 { name="supraHex"; version="1.20.0"; sha256="0p27h8xg104ip8lwasvac74hjj9582xc85q06q0n8lr660chfx2b"; depends=[ape hexbin MASS]; }; - survcomp = derive2 { name="survcomp"; version="1.32.0"; sha256="1f6vz8fbifa5lsywxcqdak5gb7fvz6rvds5a7bvdginjy1zindw9"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; - sva = derive2 { name="sva"; version="3.30.1"; sha256="0czja4c5jxa0g3fspi90nyajqmvzb29my4ykv2wi66h43f5dlwhq"; depends=[BiocParallel genefilter limma matrixStats mgcv]; }; - swfdr = derive2 { name="swfdr"; version="1.8.0"; sha256="0hib9mb1yrfl3hqddkqws32ninyc8ylzw8gd4a0sv06l16ks8b4m"; depends=[dplyr ggplot2 reshape2]; }; - switchBox = derive2 { name="switchBox"; version="1.18.0"; sha256="1s49vi0vyh0bmrc6marn69hi9ln12j3kyjkkm2z5fpvv3rvxhgw7"; depends=[gplots pROC]; }; - switchde = derive2 { name="switchde"; version="1.8.1"; sha256="1ydc9h62iyfz0786c5zhz3189p2f7sf3z6fjlvqwjqxva5j0f12b"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; - synapter = derive2 { name="synapter"; version="2.6.1"; sha256="19rf8kkqf070ldhnrdi3xl23j2slv4qadw9cx8wvc4p994f2abj9"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; }; - synergyfinder = derive2 { name="synergyfinder"; version="1.8.0"; sha256="1idc0lnjw8zx6nih1hrzfq9h40zkbdv0iv9si214wx4ynf0w18iv"; depends=[drc ggplot2 gplots gridBase lattice nleqslv reshape2]; }; - synlet = derive2 { name="synlet"; version="1.12.1"; sha256="13rghqqbkxni121ds0slf6cnj2g5zbm3sbbcli95z7mxy2wn3syg"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; - systemPipeR = derive2 { name="systemPipeR"; version="1.16.1"; sha256="0qzydz87rld2nhwzbfgrw5jfgh8maa9y54mjx9c4285m11qj2shq"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; }; - tRNA = derive2 { name="tRNA"; version="1.0.0"; sha256="1kzl79q0zim9y7px0dirk41qay96nl2bz8sw76nx56pr1d5jh245"; depends=[assertive BiocGenerics Biostrings GenomicRanges ggplot2 IRanges S4Vectors scales stringr XVector]; }; - tRNAdbImport = derive2 { name="tRNAdbImport"; version="1.0.0"; sha256="0b6h2xzxyl3kh1h8fijm5l0cqy7364p5l0s604fvhnaxa6n3y1ds"; depends=[assertive Biostrings GenomicRanges httr IRanges S4Vectors stringr tRNA xml2]; }; - tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.2.0"; sha256="1pcnwlxbw2g4398y4q94m6z7xsl492hik4z57xgjcri35y3ma06x"; depends=[assertive BiocGenerics Biostrings GenomeInfoDb GenomicRanges rtracklayer S4Vectors stringr tRNA]; }; - tRanslatome = derive2 { name="tRanslatome"; version="1.20.0"; sha256="0aa2gd1mp5lzp62vl0556i7q761jyi02ls04nw175fbq6381l2vy"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd sigPathway topGO]; }; - tenXplore = derive2 { name="tenXplore"; version="1.4.1"; sha256="18bg0wc7y8lafi38mq83qqhrd03wyyk856fa2axinixgn2qid3pq"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; - ternarynet = derive2 { name="ternarynet"; version="1.26.0"; sha256="0xar386wy1viks44s2gyiakmvy5d1k2qc422zn74nc0wwgky0jmc"; depends=[igraph]; }; - tigre = derive2 { name="tigre"; version="1.36.0"; sha256="1hyl4d1111bs6bgjpy3dwkfj9yi11r07hwsf2jn4iqcmr9l6g0rz"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; - tilingArray = derive2 { name="tilingArray"; version="1.60.0"; sha256="0ak32w49adrrh6xaf20g48xnsxr33d3irng3lbv03y2al812wpha"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; - timecourse = derive2 { name="timecourse"; version="1.54.0"; sha256="1cpmcbjwsh2mn4c0bgpvcq5da4cngsznfvz7r6cpma7iivqam1jz"; depends=[Biobase limma marray MASS]; }; - timescape = derive2 { name="timescape"; version="1.6.0"; sha256="0wnk4iwy8ji4xn1cyh257byxfvh5njd9z08hl5f74k1ni94llkp6"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; - tkWidgets = derive2 { name="tkWidgets"; version="1.60.0"; sha256="17z04pqys4nhs0c6phffkwj2yw34cajpfbgx70jsd0dba125pzh7"; depends=[DynDoc widgetTools]; }; - tofsims = derive2 { name="tofsims"; version="1.10.1"; sha256="0wgpl4az21zbixjl3ngwpxq81i86yhd41lhhnphrvrwnl7n7gk8x"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; - topGO = derive2 { name="topGO"; version="2.34.0"; sha256="1j1jcd16j564kr6qz28140fzmnh9xasi84v1c1fi98sqv30zq9bh"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; - topdownr = derive2 { name="topdownr"; version="1.4.1"; sha256="19v8m0lr1y69x1b3k01vlimfi6nzqgjg83ifc7xvzzqfsl45z09w"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics S4Vectors]; }; - trackViewer = derive2 { name="trackViewer"; version="1.18.3"; sha256="1i64px5f3iymaz933998b63wf6flal7cbr36v3i7w5xr9p2fnp04"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rgraphviz Rsamtools rtracklayer S4Vectors scales]; }; - tracktables = derive2 { name="tracktables"; version="1.16.0"; sha256="160zh73yripvd150jfwm1xpk1amrg1qqjcyl8wwclpss0ks04ayb"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; - transcriptR = derive2 { name="transcriptR"; version="1.10.1"; sha256="17m1i36jj7fdh4qqd29zia68q7yjhxgh47xndcbgbik78pfnnig7"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; - transcriptogramer = derive2 { name="transcriptogramer"; version="1.4.1"; sha256="1qd447glnwk3ysxnfjyn5i2smyq79mn6qgsa0klrgr3v1909ib57"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; }; - transite = derive2 { name="transite"; version="1.0.2"; sha256="1xrkk7n6zgch24q1hx4fxj2z8ii5pfpakjmf5696v1w1d153415m"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 ggseqlogo gridExtra Rcpp scales TFMPvalue]; }; - traseR = derive2 { name="traseR"; version="1.12.0"; sha256="1bf2cblagqkwsc66l9820kb7yh05bk62k0rplnqznnl36i5fw428"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; - treeio = derive2 { name="treeio"; version="1.6.2"; sha256="0fvyj3m8yzq94cs2nhmmq6qvf7qqccxan2qkq764a9qlfrrpwa2c"; depends=[ape dplyr jsonlite magrittr rlang rvcheck tibble tidytree]; }; - trena = derive2 { name="trena"; version="1.4.2"; sha256="1rrbkjizc4glp4ql30wn6ijmym4vxl3xda3ffy02maab1vg07mjp"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI flare GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMariaDB RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 vbsr]; }; - triform = derive2 { name="triform"; version="1.24.0"; sha256="12ca24pv1r5vbw3rq345jqg7x3prrbsxk6445zikpzfblwmw0b4s"; depends=[BiocGenerics IRanges yaml]; }; - trigger = derive2 { name="trigger"; version="1.28.0"; sha256="0wi8lk1ld21h1i0i31c858a0sgisg4ak11kyxjmsh9lyhfzayvwq"; depends=[corpcor qtl qvalue sva]; }; - trio = derive2 { name="trio"; version="3.20.0"; sha256="0fz74p4xj19mp2bbrlcrn2gr0yg7hhk0d1a2dy2k2shg7vwr15lj"; depends=[]; }; - triplex = derive2 { name="triplex"; version="1.22.0"; sha256="1fh7446v07bdhj7babj3gjq4n4zk1y7r37fs30r2cgc9lhqyccr9"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; - tspair = derive2 { name="tspair"; version="1.40.0"; sha256="1anz7by0hg51ywk9q49xjaqm8agiqdwd6rnf1mp6axph1wjfhkjm"; depends=[Biobase]; }; - tweeDEseq = derive2 { name="tweeDEseq"; version="1.28.1"; sha256="0imnscn9yf79jciq7zdzasdf777cq4sqvhnhvsy6y69vzmhi5952"; depends=[cqn edgeR limma MASS]; }; - twilight = derive2 { name="twilight"; version="1.58.0"; sha256="16vj02kxlfii0r8cdvbd4q6yqm54znn2i0697dmdfmrqbvn9rjky"; depends=[Biobase]; }; - twoddpcr = derive2 { name="twoddpcr"; version="1.6.0"; sha256="1j4xb6y2hnrvaspv7lpirx62801rq0y0gkqdgy87qkphqsf4n44z"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; - tximeta = derive2 { name="tximeta"; version="1.0.3"; sha256="10fxda9hn1nfz93mni0fv2snpqkr48x73ffjkd5hv4bwqv26cma8"; depends=[AnnotationDbi BiocFileCache ensembldb GenomeInfoDb GenomicFeatures jsonlite rappdirs S4Vectors SummarizedExperiment tibble tximport]; }; - tximport = derive2 { name="tximport"; version="1.10.1"; sha256="16wp09dm0cpb4mc00nmglfb8ica7qb4a55vm8ajgzyagbpfdd44l"; depends=[]; }; - uSORT = derive2 { name="uSORT"; version="1.8.1"; sha256="1z6vlcgs83pc7388c6jwpm9dgv9rr95gsksqy5gaiyy0pa0bga8j"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; - unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.18.0"; sha256="110kb1g1kkfgk3nw099wyaww8l2jk3kk41bsz3gmbb2jni9v0ykx"; depends=[BiocGenerics HTqPCR]; }; - universalmotif = derive2 { name="universalmotif"; version="1.0.22"; sha256="016r859xn2306zsckg0xpwv3ssngngw7drc27h7jhikmf5wkvbv1"; depends=[ape BiocGenerics Biostrings ggplot2 ggseqlogo ggtree gtools processx Rcpp Rdpack]; }; - variancePartition = derive2 { name="variancePartition"; version="1.12.3"; sha256="1ssb41g22440xcv05c3ggfzawjkl3mp74b58spjg5wcwp1rx3xyi"; depends=[Biobase colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS pbkrtest progress reshape2 scales]; }; - vbmp = derive2 { name="vbmp"; version="1.50.0"; sha256="08iyryhmahmm1p93c0kgvknf9gkd7i4l4jd3b9a234vwx5xy0zx2"; depends=[]; }; - vidger = derive2 { name="vidger"; version="1.2.1"; sha256="1gz2v4zg6ry06msmxrr3f47i4gc2sfijrbkd0l5x7crp8a2mkcm3"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; }; - viper = derive2 { name="viper"; version="1.16.0"; sha256="0pi9s37xw03pkqmsyqnigzfjmq9llk0gwh92ply07mbppldssrwc"; depends=[Biobase e1071 KernSmooth mixtools]; }; - vsn = derive2 { name="vsn"; version="3.50.0"; sha256="1g6qkpykw99jm2wv2i61dg2ffwk0n8fm4s5pm2q4c024vw5c9b69"; depends=[affy Biobase ggplot2 lattice limma]; }; - vtpnet = derive2 { name="vtpnet"; version="0.22.0"; sha256="03f96286lvhy7wlpi39awf5fjx1b40jzjp5mslfgpwx9gvk0kzdw"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; - vulcan = derive2 { name="vulcan"; version="1.4.0"; sha256="0w9cmfn7m2yn98jrgf1ixkchd2jmfinpbxhcycdfmq2yihla3l3v"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; - wateRmelon = derive2 { name="wateRmelon"; version="1.26.0"; sha256="0ymchg3nk89dm92hqksq7cmvwr2a7fxr7z4ymfigj6ifw2r4575s"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; - wavClusteR = derive2 { name="wavClusteR"; version="2.16.1"; sha256="1lxi7yn2l9gifqx08mkfc7mswb1lvca5di48g5w6pghf1jdp0rkp"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; }; - waveTiling = derive2 { name="waveTiling"; version="1.24.0"; sha256="023d329nk0w7wm8zplhqw7qwc8jwlscxkf8kbafjljrzpzwvh8an"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; }; - weaver = derive2 { name="weaver"; version="1.48.0"; sha256="1hys2gjr353lb798anamfg6mhv8hadh90qs9sc99zi96ps6c24hf"; depends=[codetools digest]; }; - webbioc = derive2 { name="webbioc"; version="1.54.0"; sha256="16n6wc9q51wfpmh9y77p53sqdqdd8pn50c67vf6h4n7gv5wgnpwi"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; }; - widgetTools = derive2 { name="widgetTools"; version="1.60.0"; sha256="0mz69pdr6q69avsvs6r5ncdkdmgwfislpil4v18dsflw4j454gwf"; depends=[]; }; - wiggleplotr = derive2 { name="wiggleplotr"; version="1.6.1"; sha256="12fhbskkjwv4d9bdy3gab8n9pcf7qpwiwgx0248as445vfw8dil3"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; - xcms = derive2 { name="xcms"; version="3.4.4"; sha256="073f25m7y8z4560k93d99fv72pr7nrgrp054zssi7jhas4l3ddww"; depends=[Biobase BiocGenerics BiocParallel lattice MassSpecWavelet MSnbase multtest mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors]; }; - xmapbridge = derive2 { name="xmapbridge"; version="1.40.0"; sha256="1a93vxrv9brfwv64wpiriwak1chlz6rg25dhcb9hyk2b8j8ky3ag"; depends=[]; }; - xps = derive2 { name="xps"; version="1.42.0"; sha256="0x391j5rlihp64k5wslghlrw6vi4xwwjphskvl1k3iffda5yqknb"; depends=[]; }; - yamss = derive2 { name="yamss"; version="1.8.1"; sha256="13pln09j08fjsr7bj17apy4j0sr79n7jzshi8jbnz57jil7k6ia9"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; - yaqcaffy = derive2 { name="yaqcaffy"; version="1.42.0"; sha256="192n1zvd54nm9q71vyb6dcr7ia6givf4bjwf6542jjig085lwhxk"; depends=[simpleaffy]; }; - yarn = derive2 { name="yarn"; version="1.8.1"; sha256="0c84x1zq34hadpsyaa873r8kg0jcxp09c2z63377hlmhsll90l7s"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; - zFPKM = derive2 { name="zFPKM"; version="1.4.1"; sha256="0rvfrjxxvfng9fxxn316gm96v4rahx62vlk3axr2bzjbi1r4s8v5"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; }; - zinbwave = derive2 { name="zinbwave"; version="1.4.2"; sha256="1gsh4wgbdb021hqscm8j4mln55xxwrnqkmnllxn3vvbyf4c6zb08"; depends=[BiocParallel copula edgeR genefilter glmnet Matrix SingleCellExperiment softImpute SummarizedExperiment]; }; - zlibbioc = derive2 { name="zlibbioc"; version="1.28.0"; sha256="0bjvzy24kab7ank02cc1qk2ikcz4dllgf66wpsdl0d3zp4gn3l2h"; depends=[]; }; + ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.16.0"; sha256="128ik28j8kmdkycffhxajv5h174zdq9sfn2gz6ai90wgkdadbzwp"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; }; + ABSSeq = derive2 { name="ABSSeq"; version="1.40.0"; sha256="12w2mcx3ammwc4ryqy3zhlw0jn4lfii5b7ll265wvlcs8g4r4yv7"; depends=[limma locfit]; }; + ABarray = derive2 { name="ABarray"; version="1.54.0"; sha256="0i84vyykvs2fgsqpzhybg5hgy7df7ic4l1fkbcfzzdwvnscwws98"; depends=[Biobase multtest]; }; + ACE = derive2 { name="ACE"; version="1.4.0"; sha256="1wvfl7qv1mifx6l72zfc47wsg8vgqpwqprm4hrbmwi0k6d77iivd"; depends=[Biobase GenomicRanges ggplot2 QDNAseq]; }; + ACME = derive2 { name="ACME"; version="2.42.0"; sha256="1bh2c216f5l5w0jv6axm73rc8dsi1kgwr9lk69xdxr2y54bgdqz3"; depends=[Biobase BiocGenerics]; }; + ADAM = derive2 { name="ADAM"; version="1.2.0"; sha256="0rq17wzy42g305zm50c40spl1lvyma4xn932nkcikwfd9b6mdmc6"; depends=[dplyr DT GO_db KEGGREST knitr pbapply Rcpp stringr SummarizedExperiment]; }; + ADAMgui = derive2 { name="ADAMgui"; version="1.2.0"; sha256="1i1dqxz742gknmsy8xxisjfbxxhhp61fjsdcb11sd11giacm2s8j"; depends=[ADAM colorRamps data_table dplyr DT ggplot2 ggpubr ggrepel ggsignif GO_db gridExtra knitr RColorBrewer reshape2 shiny shinyjs stringi stringr testthat varhandle]; }; + ADaCGH2 = derive2 { name="ADaCGH2"; version="2.26.0"; sha256="0q17mn205ymrnijsy2ygkjqzk9qll7vps6mya37p3154g4km4l7d"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; + AGDEX = derive2 { name="AGDEX"; version="1.34.0"; sha256="0c5nxgbq0vc11jml9qlmdmyxpf3irwbffavgm72bpb6q3q9gmkvr"; depends=[Biobase GSEABase]; }; + AIMS = derive2 { name="AIMS"; version="1.18.0"; sha256="0lqgm9sm310nj3lw8n6xnmnfqsvdq3lrbzz8jbwqppj801z9viav"; depends=[Biobase e1071]; }; + ALDEx2 = derive2 { name="ALDEx2"; version="1.18.0"; sha256="04a5lrvpbp4ygjidapxvfhdc8psd4h6zdv7kwxpg6q4awsa0ni6r"; depends=[BiocParallel GenomicRanges IRanges multtest S4Vectors SummarizedExperiment]; }; + ALPS = derive2 { name="ALPS"; version="1.0.0"; sha256="1hjpvsnqb17nkb8qlz4hkmr193m5v262g7kq1mqj4k4zchh2ffbc"; depends=[assertthat BiocParallel ChIPseeker corrplot data_table dplyr genefilter GenomicRanges GGally gghalves ggplot2 ggseqlogo Gviz magrittr org_Hs_eg_db plyr reshape2 rtracklayer stringr tibble tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + AMARETTO = derive2 { name="AMARETTO"; version="1.2.0"; sha256="0wfmrk5v0sgsk7hbw3v5nydg0js9r3p6aya5ls8bd5cqia4pbbnx"; depends=[BiocFileCache callr circlize ComplexHeatmap curatedTCGAData doParallel dplyr DT foreach ggplot2 glmnet gridExtra httr impute knitr limma Matrix matrixStats MultiAssayExperiment Rcpp readr reshape2 rmarkdown tibble]; }; + AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.12.0"; sha256="08lpjcyrcd698zqvajqqnmnghp5rbcalijnzmgfszicbhcp3pzwl"; depends=[]; }; + ANF = derive2 { name="ANF"; version="1.8.0"; sha256="1rf027kgzp36k8wb0jg7xcf5rwykm0cyykqsn8z416v1wwgxmggb"; depends=[Biobase igraph MASS RColorBrewer survival]; }; + APAlyzer = derive2 { name="APAlyzer"; version="1.0.0"; sha256="01iqqirbv3pljgrbzygc7hbzp48bgglpwhnka832hrdql7fz7l94"; depends=[DESeq GenomicAlignments GenomicFeatures GenomicRanges Rsubread SummarizedExperiment]; }; + ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.26.0"; sha256="0jj81q454nyh4hr5c56q1hv7i4ynx3rwnvpv08w34a6m77122bi1"; depends=[ARRmData]; }; + ASAFE = derive2 { name="ASAFE"; version="1.12.0"; sha256="0jf0n0z21n113dwfmyfxgwmyl80hrhg0bibbydaclgcqp34bi8rk"; depends=[]; }; + ASEB = derive2 { name="ASEB"; version="1.30.0"; sha256="1nvgszvpac44y3bbmxafhp6ii6l5iffwgxah4hn30adr3hfd5qrr"; depends=[]; }; + ASGSCA = derive2 { name="ASGSCA"; version="1.20.0"; sha256="1f8v87qf5yvymddvzyrllp8c7wjcim93s046jkcxl3mqzqlc778h"; depends=[MASS Matrix]; }; + ASICS = derive2 { name="ASICS"; version="2.2.0"; sha256="0h0yw8v164mc8xnypmmg1h2856mk6iapppqzvcd81djm2cr9v145"; depends=[BiocParallel ggplot2 gridExtra Matrix PepsNMR plyr quadprog ropls SummarizedExperiment TSdist zoo]; }; + ASSET = derive2 { name="ASSET"; version="2.4.0"; sha256="04mld0rhv5zbp7dcln6nn6zlvnl2rlak5zbgp2hfdvkzaqdk9r2l"; depends=[MASS msm rmeta]; }; + ASSIGN = derive2 { name="ASSIGN"; version="1.22.0"; sha256="1m9n7r2zx8rl60ypfg7jfnbybjznzcpa40z0p763061rbdh94fzq"; depends=[ggplot2 gplots msm Rlab sva yaml]; }; + ASpediaFI = derive2 { name="ASpediaFI"; version="1.0.0"; sha256="1nzjjjyjjjsk09mi3gb9ijdim078vra2w4lp21zkj74cvzzqmwsr"; depends=[BiocParallel biomaRt dplyr DRaWR e1071 fgsea GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz igraph IRanges IVAS limma Matrix mGSZ reshape2 ROCR Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; }; + ASpli = derive2 { name="ASpli"; version="1.12.0"; sha256="0xs8l130kscmjscm88787b83fvzrlgysifrl0v651zkzdkjd0y5d"; depends=[AnnotationDbi BiocGenerics BiocStyle edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rsamtools S4Vectors]; }; + ATACseqQC = derive2 { name="ATACseqQC"; version="1.10.3"; sha256="18zf90iksglbs13cwr4jjwsv332a19lf4bpdmy69jz8bpwrklv22"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno edgeR GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; }; + AUCell = derive2 { name="AUCell"; version="1.8.0"; sha256="1g4mdq8z29fjxrfjng0fb3cvbph49mwds4ijsa2bn2k6f75dnzky"; depends=[BiocGenerics data_table GSEABase mixtools R_utils S4Vectors shiny SummarizedExperiment]; }; + AWFisher = derive2 { name="AWFisher"; version="1.0.1"; sha256="1m10l1xg9x0kxj25hrcb89wbhq7pf6k7iyhi9a0ap0az4rk6lph0"; depends=[edgeR limma]; }; + AffiXcan = derive2 { name="AffiXcan"; version="1.4.0"; sha256="0sl3cvjwxfy2lm5lc132gwvba1c0yvqnv3q1cwhf594dm8hi52a3"; depends=[BiocParallel crayon MultiAssayExperiment SummarizedExperiment]; }; + AffyCompatible = derive2 { name="AffyCompatible"; version="1.46.0"; sha256="10ahrdlifp1i7rd58zb10w75y5bnigs7xp5gv4fhb5y7p7dvb0ks"; depends=[Biostrings RCurl XML]; }; + AffyExpress = derive2 { name="AffyExpress"; version="1.52.0"; sha256="0w78kl0r57iacbaaiic5yhbpi18cpay95hhcap16ii75pr7k3yx7"; depends=[affy limma]; }; + AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.32.0"; sha256="18pa7jjlx68d9rwrc2mc54hqlm7xqs7jh2a3zwfqyhnwvmqmr08a"; depends=[affy]; }; + AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.36.0"; sha256="0k7bb7qfp6dqpaqx5542zgxhhnnlpnkqc9hpz21d0krsav29jjx2"; depends=[affy affycoretools Biobase limma preprocessCore]; }; + AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.24.0"; sha256="0vy8w7ii2qljsmq8lr21lygkcrsshc7syyqhadlbxyj3scgi7kyc"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; + AlphaBeta = derive2 { name="AlphaBeta"; version="1.0.0"; sha256="19vf0rzn168rinl8xn4idhf3ng4aj7zp930pvpfjggyfbbhb3wpa"; depends=[BiocParallel data_table dplyr expm gtools optimx stringr]; }; + AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.20.0"; sha256="0hjw26178y771pk1m2agkhdbg8k76hx5bmfb78w9h49s5sr6036k"; depends=[Biobase graph log4r rjson]; }; + Anaquin = derive2 { name="Anaquin"; version="2.10.0"; sha256="1859c7mwji2j0kcw4cawk34fi83fcfvb8h7d3j82k6hg6g1gd1yi"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; }; + AneuFinder = derive2 { name="AneuFinder"; version="1.14.0"; sha256="054m9scwnw0snk9vw3f2a1r1zrd9qqs05khd9n7i7jmivnzx5qrb"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; + AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.48.0"; sha256="09piz1f0xpbb4amskx4ilby6lfrn27hhwk75il2c4lq6m3hr4w8s"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; + AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.10.0"; sha256="1l9sxhlvnwn6327vgg02h11ppmqr2zr07ff8wmcng0i1jbqwa8q5"; depends=[GenomicRanges lazyeval]; }; + AnnotationForge = derive2 { name="AnnotationForge"; version="1.28.0"; sha256="0h2r60v339ajk5r6xq4iwwcpihdvf12fi8255byr2dhglzrd8xl7"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; + AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.36.0"; sha256="0ws14b1ibqml7w8kj0gi7wdp6wd8dcdpnrmcxldjzsyawf17q0yq"; depends=[AnnotationDbi DBI]; }; + AnnotationHub = derive2 { name="AnnotationHub"; version="2.18.0"; sha256="19vj3bk8jz68q84g3j8xs1s9bqz90lbwbciig1h45zvn2zc6087m"; depends=[AnnotationDbi BiocFileCache BiocGenerics BiocManager BiocVersion curl dplyr httr interactiveDisplayBase rappdirs RSQLite S4Vectors yaml]; }; + AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.16.0"; sha256="1a982rjpd5gnyas1af7x3xabryz9whgbl8k4jm5639bvmq668zmm"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; + ArrayExpress = derive2 { name="ArrayExpress"; version="1.46.0"; sha256="1853akd4rsa312gqlm0imxqhwscifd69swxyrlxp4fifaiv30qw4"; depends=[Biobase limma oligo XML]; }; + ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.36.0"; sha256="05w0w5q1bb0qay6m18bigq5l4q1kycv72pli5g8gpbn6x13dqaar"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer Rhtslib rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; + ArrayTV = derive2 { name="ArrayTV"; version="1.24.0"; sha256="1x5kclva72wlblndh4gynb9v22932xas46km13fhdf1k47a8rb1a"; depends=[DNAcopy foreach IRanges oligoClasses S4Vectors]; }; + ArrayTools = derive2 { name="ArrayTools"; version="1.46.0"; sha256="1zs3p81ah7pp605vrfq86cykhapgszf3ba6qmm6npd229007n1ap"; depends=[affy Biobase limma xtable]; }; + AssessORF = derive2 { name="AssessORF"; version="1.4.0"; sha256="081rzjnx4zb5gq5rsm4n6309xf393dpzq79qzy3rqhyblffk3c6z"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; }; + Autotuner = derive2 { name="Autotuner"; version="1.0.1"; sha256="044msxwrnqwvxk3nd436dz2n6jwa70bdn368kxrpx3cxcggr9r90"; depends=[assertthat cluster devtools dplyr entropy MSnbase mzR plyr RColorBrewer rlang scales]; }; + BAC = derive2 { name="BAC"; version="1.46.0"; sha256="0ww3am5kcqmgvxhgp9pxq86p24v3bbjx1hshkdwf9ixcg7aygxjx"; depends=[]; }; + BADER = derive2 { name="BADER"; version="1.24.0"; sha256="01p8hsv49n7x6nrg831889ffc5p8np3hsjflqbgvgxckfs67q9zi"; depends=[]; }; + BAGS = derive2 { name="BAGS"; version="2.26.0"; sha256="04a33ja70q9gv4cmz2vg85lh1h7v9l4j87nnc3p6sdcxlviq2k4x"; depends=[Biobase breastCancerVDX]; }; + BANDITS = derive2 { name="BANDITS"; version="1.2.1"; sha256="0dbib2g99ppmh2p412i4f97ankh8byp6ivxmwh8m13vsn5fsnfgq"; depends=[BiocParallel data_table doParallel doRNG DRIMSeq foreach ggplot2 MASS Rcpp RcppArmadillo]; }; + BASiCS = derive2 { name="BASiCS"; version="1.8.1"; sha256="1q9dlvh63795x7zz9x8rgf9fcpd7ipq0260r5slr8rnm0w8yfrag"; depends=[Biobase BiocGenerics coda cowplot data_table ggExtra ggplot2 KernSmooth MASS Matrix matrixStats Rcpp RcppArmadillo S4Vectors scran SingleCellExperiment SummarizedExperiment viridis]; }; + BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.16.0"; sha256="0a21rgp3ph1gwmj053xhs8y0g25p3sadl79nxsnzyzxiwmk9l3h0"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; + BCRANK = derive2 { name="BCRANK"; version="1.48.0"; sha256="0l2ap0y0ab5vv1l0pdqlf2zjqgvp8xx8951fz3bc5mm5ccgvip5l"; depends=[Biostrings]; }; + BDMMAcorrect = derive2 { name="BDMMAcorrect"; version="1.4.0"; sha256="0yb0zv4i62s91adnrm06v7d5zvv8vkl35v0b5zj4yxz2va8hhxkv"; depends=[ape ellipse ggplot2 Rcpp RcppArmadillo RcppEigen SummarizedExperiment vegan]; }; + BEARscc = derive2 { name="BEARscc"; version="1.6.0"; sha256="0q6az6blgc4b27i2m1jrcdrs85nqx6i9lzbwbxq7xkmxslxj04iq"; depends=[data_table ggplot2 SingleCellExperiment]; }; + BEAT = derive2 { name="BEAT"; version="1.24.0"; sha256="0wnlvg5wilrrzzi5kcm768f9qkpyirssgblyyysdhyxjvzkw5cy0"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; + BEclear = derive2 { name="BEclear"; version="2.2.0"; sha256="1h9qq8mchkx0yw6ff2irg5afznjpclcw9064l9v1jpfsgg1w6rww"; depends=[abind BiocParallel data_table futile_logger Matrix outliers Rcpp Rdpack]; }; + BGmix = derive2 { name="BGmix"; version="1.46.0"; sha256="1bwqqhkh4m3hhpd71grwjrg7n07lzvys4y7aghmw2gw5ibnk5683"; depends=[KernSmooth]; }; + BHC = derive2 { name="BHC"; version="1.38.0"; sha256="1bxx3jak8mgvay3j1xd59bb9j86pzl6hh5abxww9x1b7rswmy1jh"; depends=[]; }; + BLMA = derive2 { name="BLMA"; version="1.10.0"; sha256="1r9sydwn0rwikf6c652amxjn89c4m2zjk2mabpv3wx3dnw39pvlg"; depends=[Biobase graph GSA limma PADOG ROntoTools]; }; + BPRMeth = derive2 { name="BPRMeth"; version="1.12.0"; sha256="1qpa7i82dydy58b51wgj9bcwi4m3y46q9jylll48wyr28jcqgymq"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; }; + BRAIN = derive2 { name="BRAIN"; version="1.32.0"; sha256="1qag7c6f87kwyklbqn45c4kjs6c3im4rp8w176nym1q13h38dc5p"; depends=[Biostrings lattice PolynomF]; }; + BSgenome = derive2 { name="BSgenome"; version="1.54.0"; sha256="0nn1b3h4hmnx5whf2cmzmyxdrcf4myj8c38rwr0sw4rc07xfzndy"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; }; + BUMHMM = derive2 { name="BUMHMM"; version="1.10.0"; sha256="0980vrhx1wral8cyfk314i9ada94v3qnksp5l0yr6xnm4cprgamz"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; }; + BUS = derive2 { name="BUS"; version="1.42.0"; sha256="0x2v0lar4frlrgdf7gqg1ixq2g16267xh4vw0sjp62cig7amf87b"; depends=[infotheo minet]; }; + BUScorrect = derive2 { name="BUScorrect"; version="1.4.0"; sha256="1kf016afc4haj01hcarjw0b9zakjjjl46sp3vh4m5445fgq8mkm1"; depends=[gplots SummarizedExperiment]; }; + BUSpaRse = derive2 { name="BUSpaRse"; version="1.0.0"; sha256="06a7zjijr6vgkr4r4wldapjr5vpq41sxn6fra3z0p3dlpri06hv7"; depends=[AnnotationDbi AnnotationFilter BH biomaRt Biostrings BSgenome data_table dplyr ensembldb GenomeInfoDb GenomicFeatures GenomicRanges magrittr Matrix plyranges Rcpp RcppArmadillo RcppParallel RcppProgress S4Vectors stringr tibble tidyr zeallot]; }; + BaalChIP = derive2 { name="BaalChIP"; version="1.12.0"; sha256="09xcdw658m810f9641rbmkjdyj7pgm3g70rdv31jaiz2h16z9l75"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; + BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.14.0"; sha256="0kpb1mw9894zdx2yl5r95fkm11n9qra59dlp5d09yd1fsyr6p4z0"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.30.0"; sha256="0z59pzywnm5dpflaa32r6l51xzvv1mb93rn4bj6p8vzq39v2wbcw"; depends=[RCurl RJSONIO]; }; + Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.22.0"; sha256="0dbmnz2c8f729imnabxpj442l7bqsidv4kfaz1ggda9i3j3z514n"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; + BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.14.0"; sha256="0lr0zpsykrnss3z1hfhymsd33wjvcg8mmzqm8zf29vfmpyn37km9"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; + BatchQC = derive2 { name="BatchQC"; version="1.14.0"; sha256="18b7sfy73i7m4i876pkmw1vadcb8vllld98jafd2bxs6vis3dc6a"; depends=[corpcor d3heatmap ggvis gplots knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; + BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.12.0"; sha256="0b4p2d2dvrzanjgxx3f15wq5355li6wq1f7l1irniwiabjm03w2n"; depends=[Biobase]; }; + BayesPeak = derive2 { name="BayesPeak"; version="1.38.0"; sha256="1w5b8zma5xw1v71j67b8gr5bh14vs799dg9vbbs1yhkn42zbiyrr"; depends=[IRanges]; }; + BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.38.0"; sha256="0i46cs2w6s8zyhda5s56m870cma7b05430qcqavg8cv8ycr0fh4c"; depends=[]; }; + BgeeDB = derive2 { name="BgeeDB"; version="2.12.1"; sha256="1fpbjsrbhb4jmwyjjga7bzjd1qng7gyg2grqzdn1nyhpqlfpxciv"; depends=[Biobase data_table digest dplyr graph RCurl tidyr topGO]; }; + BiFET = derive2 { name="BiFET"; version="1.6.0"; sha256="0ck1d6hxd4f40hfz8p2z5xmjbz79yhrf6fisjka2xzk5v9fm4p4k"; depends=[GenomicRanges poibin]; }; + BiGGR = derive2 { name="BiGGR"; version="1.22.0"; sha256="1n2ypc84abmhn6br0yi87k7lvjc11k7abzhgvzdabc2ai1qgcqif"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; + BiRewire = derive2 { name="BiRewire"; version="3.18.0"; sha256="1074cp422ail72yajn8p0bg26h6zzz07nzypnwfyv86qrpvpdw9q"; depends=[igraph Matrix slam tsne]; }; + BiSeq = derive2 { name="BiSeq"; version="1.26.0"; sha256="1wvaijskay6zgnn9b4l0jxqp89lw3nbz3rprhg2vlhrsdi80ki6j"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; + BicARE = derive2 { name="BicARE"; version="1.44.0"; sha256="1gia5vzmvbk4k1vx3bh9nld1ws9s3c0y11qfbzqhfnfjbd7n8qcs"; depends=[Biobase GSEABase multtest]; }; + BioCor = derive2 { name="BioCor"; version="1.10.0"; sha256="1bjw02rwmz2d715sgpfp08njb15200ch7cmipsf9hd5835ppg1jl"; depends=[BiocParallel GSEABase Matrix]; }; + BioMM = derive2 { name="BioMM"; version="1.2.0"; sha256="1q1ajzc2f457g9ah3ypd3lymhwdl8l0i63m0b2x89jxwfxvcnbig"; depends=[BiocParallel CMplot e1071 ggplot2 glmnet lattice nsprcomp pROC ranger rms variancePartition vioplot]; }; + BioMVCClass = derive2 { name="BioMVCClass"; version="1.54.0"; sha256="0lpjm3igcq3qkiqq627bix9dsxa4q9xxkbf27h79wbkng8b0prkf"; depends=[Biobase graph MVCClass Rgraphviz]; }; + BioNet = derive2 { name="BioNet"; version="1.46.0"; sha256="1p50ijx73vp53svky3sw8fdxmf0xwfik4ks1mzydhlb47z7gdm9i"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; + BioNetStat = derive2 { name="BioNetStat"; version="1.6.0"; sha256="15lx3zxrd9x1s7hw5d62s7pngyby3cpbpbm2vad54a5qcabpp710"; depends=[BiocParallel ggplot2 Hmisc igraph knitr pathview pheatmap plyr psych RColorBrewer RJSONIO shiny shinyBS whisker yaml]; }; + BioQC = derive2 { name="BioQC"; version="1.14.0"; sha256="0c8qmxvqwws5fdzy23zmj6r3aa2yy3rjxxhxvys63dzyh9s0728v"; depends=[Biobase edgeR Rcpp]; }; + BioSeqClass = derive2 { name="BioSeqClass"; version="1.44.0"; sha256="1a7xrd7p84sqk11bpv8xqmzzzkh8wm09nixbj6gks4sbi5k6b0hd"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; + BioTIP = derive2 { name="BioTIP"; version="1.0.0"; sha256="14xvlb3bba8y7ha7b7373qcaihhv94lnxl0vyixzfhkyh4w4phw8"; depends=[cluster GenomicRanges igraph psych stringr]; }; + Biobase = derive2 { name="Biobase"; version="2.46.0"; sha256="1gx41083dqlm59vwqdxvc4ny31x91j48mda9n3scg0f2zwasvqgl"; depends=[BiocGenerics]; }; + BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.48.0"; sha256="1sg9vxs24zfz3dg9y0qlrdsq43y0pbahbvcfxzlxjzjw80xzxpbd"; depends=[Biobase]; }; + BiocCheck = derive2 { name="BiocCheck"; version="1.22.0"; sha256="1qnvl5yajgh67ijkq6gdsafri1k5hyw5gzn2ccqk9ymx6i2xd80g"; depends=[BiocManager biocViews codetools graph httr knitr optparse stringdist]; }; + BiocFileCache = derive2 { name="BiocFileCache"; version="1.10.2"; sha256="0jivhn95y6zv5ryamqk6nyd4l8nlskq64j362l9ml9qw746v0ja6"; depends=[curl DBI dbplyr dplyr httr rappdirs RSQLite]; }; + BiocGenerics = derive2 { name="BiocGenerics"; version="0.32.0"; sha256="1np8y442zyakm4axpinbw1qsgc6wd3zjsnirbhc8lcii4ky9j0rn"; depends=[]; }; + BiocNeighbors = derive2 { name="BiocNeighbors"; version="1.4.2"; sha256="1bx7i5pifj8w89fnhfgcfgcar2ik2ad8wqs2rix7yks90vz185i6"; depends=[BiocParallel Matrix Rcpp RcppAnnoy RcppHNSW S4Vectors]; }; + BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.6.0"; sha256="0rnah6c01a33yb9663jim9iclan61rpcwprb56mykgn1pf5hywbj"; depends=[bigrquery car ComplexHeatmap curatedTCGAData DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 ggpubr graph httr IRanges magrittr plyr Rgraphviz rjson S4Vectors scales shiny SummarizedExperiment]; }; + BiocParallel = derive2 { name="BiocParallel"; version="1.20.1"; sha256="0g0znb4whsvb9hpwx9xaasdi5n4vjqw8cpdyqgrdrjm91rls1h21"; depends=[BH futile_logger snow]; }; + BiocPkgTools = derive2 { name="BiocPkgTools"; version="1.4.6"; sha256="0grwnmncmpqcplbfw3j210m1a8f7mmdizklh4zksg4ic21dpjj1a"; depends=[BiocFileCache BiocManager biocViews dplyr DT gh graph htmltools htmlwidgets httr igraph jsonlite magrittr rappdirs RBGL readr rex rlang rvest stringr tibble tidyr tidyselect xml2]; }; + BiocSet = derive2 { name="BiocSet"; version="1.0.1"; sha256="1xcksnvjflrdarn8xqmgf0n6wbsjkq9jazqwp35i52vqcq4ic1j9"; depends=[AnnotationDbi dplyr KEGGREST plyr rlang rtracklayer tibble]; }; + BiocSingular = derive2 { name="BiocSingular"; version="1.2.2"; sha256="1282fdwxrpga87y8xflr0sl8ajwawgn2i9i65my8mbg5vrixs407"; depends=[beachmat BiocGenerics BiocParallel DelayedArray irlba Matrix Rcpp rsvd S4Vectors]; }; + BiocSklearn = derive2 { name="BiocSklearn"; version="1.8.0"; sha256="1lhs9w5zkc8iq9hhrbgfg4wjfs4krjwz10m5ngymq1g0hgykwzg2"; depends=[BBmisc knitr reticulate SummarizedExperiment]; }; + BiocStyle = derive2 { name="BiocStyle"; version="2.14.4"; sha256="1x71in059zql40f4c87bd1gf96r945kdvwbq61jmch9d3d8nwxbb"; depends=[BiocManager bookdown knitr rmarkdown yaml]; }; + BiocVersion = derive2 { name="BiocVersion"; version="3.10.1"; sha256="0mfqjqfvrwwglldq3g7nbic5hf3nwzv02nbfxnl2cfvf9gznlh5f"; depends=[]; }; + BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.12.0"; sha256="1v4bhnpdkmllm7aghms9b7369hkrgz7mn69wbrqg1x42pgkf30ad"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown rstudioapi stringr usethis]; }; + Biostrings = derive2 { name="Biostrings"; version="2.54.0"; sha256="0pq7g2hflx2cjlpwdj6mscw9hnxvlf5y50dxf48lbrf9r3q9kmyp"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; + BitSeq = derive2 { name="BitSeq"; version="1.30.0"; sha256="01w3pfv4dsidsvkdlcbjqmhhcwsd2jl8y0kdddhfjyhmv559i26c"; depends=[IRanges Rhtslib Rsamtools S4Vectors]; }; + BrainStars = derive2 { name="BrainStars"; version="1.30.0"; sha256="0k0s5720b0bi27jk3x6j2p4qw6gwmw5jpyjn838lqcszw5v10dh9"; depends=[Biobase RCurl RJSONIO]; }; + BridgeDbR = derive2 { name="BridgeDbR"; version="1.20.3"; sha256="0ypyhhsjz9i12dkah8iajrmwhk30jdy7yj6y9ab7hjsqnv3l20x5"; depends=[RCurl rJava]; }; + BrowserViz = derive2 { name="BrowserViz"; version="2.8.0"; sha256="0607namgkd0cy0hxmannhbcc59x95piaw03vcs76mns0qi5hsl2d"; depends=[BiocGenerics httpuv jsonlite]; }; + BubbleTree = derive2 { name="BubbleTree"; version="2.16.0"; sha256="0bz2ycj4v8vqyci5894xmld9zjwjd45ljgldjma9g3v2rb2k5z14"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; }; + BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.50.0"; sha256="1wngrsw8fylahrvghz57pajpq9gpi6dq8w71kvx5mfxapy9gs9ld"; depends=[]; }; + BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.50.0"; sha256="1896gh2hmh4ml4c3k6s3swx8rh2ks43zkzvq93fdl08vsx63bqxq"; depends=[BufferedMatrix]; }; + CAFE = derive2 { name="CAFE"; version="1.22.0"; sha256="1rhmhk0fkd83s84rmj44r8dspch88b1ry2gaxdrsh1c72698hx1a"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; + CAGEfightR = derive2 { name="CAGEfightR"; version="1.6.0"; sha256="1r99m3km4y5006plmj9xi9jbq29hy39c6wds518h9302zl31x2jn"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges grr Gviz InteractionSet IRanges Matrix Matrix_utils pryr rtracklayer S4Vectors SummarizedExperiment]; }; + CAGEr = derive2 { name="CAGEr"; version="1.28.0"; sha256="1257yz4rn6lysvmdabapw2aai4axdybdd7dlzxfb6vls2mw2cikw"; depends=[beanplot BiocGenerics BiocParallel BSgenome data_table DelayedArray formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; }; + CALIB = derive2 { name="CALIB"; version="1.52.0"; sha256="00nnnnwgapbhy32wryd3zv9lrl18gs3cvzi87zvzakx5a5wanqc6"; depends=[limma]; }; + CAMERA = derive2 { name="CAMERA"; version="1.42.0"; sha256="0hv1p317wk6fqfwly10s23844s766bs5xis5q6a81iwbd87vba13"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; + CAMTHC = derive2 { name="CAMTHC"; version="1.4.0"; sha256="1skzp08iq91qr931fpmwljhnfy595igpm57gd5cng4azs6nkmy4n"; depends=[apcluster Biobase BiocParallel corpcor DMwR geometry NMF nnls pcaPP rJava SummarizedExperiment]; }; + CATALYST = derive2 { name="CATALYST"; version="1.10.1"; sha256="0lxl4bq98li4p70f77k5mnbqj72gc8bq6s2fy0vakhqnk9kl2y3j"; depends=[Biobase circlize ComplexHeatmap ConsensusClusterPlus cowplot data_table dplyr drc DT flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra htmltools limma magrittr Matrix matrixStats nnls plotly purrr RColorBrewer reshape2 Rtsne S4Vectors scales scater shiny shinyBS shinydashboard shinyjs SingleCellExperiment SummarizedExperiment]; }; + CAnD = derive2 { name="CAnD"; version="1.18.0"; sha256="0a99v7c7j673pmahvg13qf5m6rkqhc5frkaxgklv1kbif7k2chch"; depends=[ggplot2 reshape]; }; + CCPROMISE = derive2 { name="CCPROMISE"; version="1.12.0"; sha256="0p1yyav0ajhl8qxvcjhv5bmndz6imn0bxg28ka9pmf29h989fxrh"; depends=[Biobase CCP GSEABase PROMISE]; }; + CEMiTool = derive2 { name="CEMiTool"; version="1.10.1"; sha256="0dc90k9v62ffir38sq3rc1zyi6kzypyfb3zyyhwzb34q1qy16n76"; depends=[clusterProfiler data_table dplyr DT fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; }; + CFAssay = derive2 { name="CFAssay"; version="1.20.0"; sha256="0n4xci4rq7ylwc20h88p5d6znzys0jayzf8vrgv8vvkjsr5ww3nb"; depends=[]; }; + CGEN = derive2 { name="CGEN"; version="3.22.0"; sha256="1mh9a2r3y184ad83x4y4d7kdd42jiwqgb410x9khmf8hgdi4yhrv"; depends=[mvtnorm survival]; }; + CGHbase = derive2 { name="CGHbase"; version="1.46.0"; sha256="0136pk6pfwpiiy9vca4pgg4wh74jfb5ssglpdszzhamljpvg765x"; depends=[Biobase marray]; }; + CGHcall = derive2 { name="CGHcall"; version="2.48.0"; sha256="1x8pz7zhw2nabik1vgdhlivndqvil3s7vnl5070k493v6gza0p3s"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; + CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.40.0"; sha256="0vixpy271m2j80a9fqr0siqkd0w31ym7vzghpgnnhjr1m3qk38wd"; depends=[Biobase CGHbase CGHcall]; }; + CGHregions = derive2 { name="CGHregions"; version="1.44.0"; sha256="1q4xg4xs80n3dz0y0wwdyykga03jymga0qx74a91k1jf1jpkgdm9"; depends=[Biobase CGHbase]; }; + CHARGE = derive2 { name="CHARGE"; version="1.6.0"; sha256="1bzbsjkkavhjx5xqb2b5gwhywpcn70si3702hbw7yl62icigjywb"; depends=[cluster diptest factoextra FactoMineR GenomicRanges IRanges matrixStats plyr SummarizedExperiment]; }; + CHETAH = derive2 { name="CHETAH"; version="1.2.0"; sha256="1b4laxj5arc7cpyz263q09bc9m6k2rrr3s8ll7ans4civhzzqa4z"; depends=[bioDist corrplot cowplot dendextend ggplot2 gplots pheatmap plotly reshape2 S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; + CHRONOS = derive2 { name="CHRONOS"; version="1.14.0"; sha256="14qk2fckk3zq5rii3cdi5pzx35c1nkaprw9hk6cybnvrl8w4a93v"; depends=[biomaRt circlize doParallel foreach graph igraph openxlsx RBGL RCurl XML]; }; + CINdex = derive2 { name="CINdex"; version="1.14.0"; sha256="1b192pd91bi2a0f1vrfijxzadgmm62fhbia3a2yvy0zpndfcjzh2"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; + CMA = derive2 { name="CMA"; version="1.44.0"; sha256="07pcrzwdvrx9wk6xxc55mh8xw4vvap69x8fwqgiwzjq0fcckv1pn"; depends=[Biobase]; }; + CNAnorm = derive2 { name="CNAnorm"; version="1.32.0"; sha256="1z0lsrgp7i20v7lhmq6428nisv3rqslyxp7k6s1360gv7sajhn4i"; depends=[DNAcopy]; }; + CNEr = derive2 { name="CNEr"; version="1.22.0"; sha256="0d7q7kdpd6bpg6xqqp07gq98ffazfn1saxiyig1yn8w2mz1vjkzv"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; + CNORdt = derive2 { name="CNORdt"; version="1.28.0"; sha256="006v3wvnhr5hm7y6ljfcps43ahwh4byw33ifaaawk4s4n0qvnqhv"; depends=[abind CellNOptR]; }; + CNORfeeder = derive2 { name="CNORfeeder"; version="1.26.0"; sha256="15b62ky0pzjc3q3f5fd4a0kgw13vk0956y79q7xlch876yc2hnwm"; depends=[CellNOptR graph]; }; + CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.28.0"; sha256="044fg9hl73icm1x4y1xdhxly4w75xs80in2h5cjlvg2kjvbsq0za"; depends=[CellNOptR nloptr]; }; + CNORode = derive2 { name="CNORode"; version="1.28.0"; sha256="18k5bk20f4kdyb963va7aabrc0i84h02m608nsz4dwjm6bkna0al"; depends=[CellNOptR genalg]; }; + CNTools = derive2 { name="CNTools"; version="1.42.0"; sha256="0cvkwafz0g1nlhajdwgz2y3y3h1dq1r24548rcj6m8fz6jwcxdjj"; depends=[genefilter]; }; + CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.18.0"; sha256="05ac5b6pzbm60isw1diabyb8zpbbwxidn88vzlhkcm3jb74c312h"; depends=[exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; }; + CNVRanger = derive2 { name="CNVRanger"; version="1.2.2"; sha256="045hznxd87bbjfqhfsqcwmc0al1nnsifissn0avr0i0sv6l52z3x"; depends=[BiocParallel data_table edgeR GDSArray gdsfmt GenomeInfoDb GenomicRanges IRanges lattice limma plyr qqman RaggedExperiment rappdirs reshape2 S4Vectors SNPRelate SummarizedExperiment]; }; + CNVfilteR = derive2 { name="CNVfilteR"; version="1.0.4"; sha256="0m3cy2pqld41g6hrjl040912r80x4v651d0wff1nqdas2wnpjbqp"; depends=[assertthat Biostrings CopyNumberPlots GenomeInfoDb GenomicRanges IRanges karyoploteR pracma regioneR Rsamtools SummarizedExperiment VariantAnnotation]; }; + CNVrd2 = derive2 { name="CNVrd2"; version="1.24.0"; sha256="0dgl73zvxm843vg34nhdpm4hax5y9chjy1j86x98kqdg1wpy4yjq"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; + CNVtools = derive2 { name="CNVtools"; version="1.80.0"; sha256="1f0p58w7kj8sc6awp742s8x5fmlv1f8zmd11bf2ki3rndf3drhfy"; depends=[survival]; }; + COCOA = derive2 { name="COCOA"; version="2.0.0"; sha256="0fq96b8m8vy4801s1pv7wyy0z60mafvhkibih0hld3rv19ammzk7"; depends=[Biobase BiocGenerics ComplexHeatmap data_table fitdistrplus GenomicRanges ggplot2 IRanges MIRA S4Vectors simpleCache tidyr]; }; + CODEX = derive2 { name="CODEX"; version="1.18.0"; sha256="1bpph4c3hw01dwjs3rr1jlb8a01hd31q0yrxg5q4srrcgp2854pf"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; + COHCAP = derive2 { name="COHCAP"; version="1.32.0"; sha256="1h18fp6d59a4hp39b9d1gvw9k2x66v46scqym25n4p936jp3dmc8"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; }; + COMPASS = derive2 { name="COMPASS"; version="1.24.1"; sha256="12gnsazjbc233l3nxap4m3rgs14dqr4c433q3vd4gwjiwlc511g8"; depends=[abind BiocStyle clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; }; + CONFESS = derive2 { name="CONFESS"; version="1.14.0"; sha256="1mfah67rnq4wylivd43azcjmybk1nppvlj3lwkzr99igcp67km7y"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; + CORREP = derive2 { name="CORREP"; version="1.52.0"; sha256="0fnkjcfcnjc6rnp9xqfj429l5y6a84750xhxjsga4db8lddr6143"; depends=[e1071]; }; + COSNet = derive2 { name="COSNet"; version="1.20.0"; sha256="1qwzmjhiz4v6b8pz51dm9d8yn1k6waprw183z4bzw3vc51ivsvcc"; depends=[]; }; + CRISPRseek = derive2 { name="CRISPRseek"; version="1.26.0"; sha256="1fs17b479hmgh7i1z9ds3pyrg3yc8428xmv2mvq1mmn677k0zj8v"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; }; + CRImage = derive2 { name="CRImage"; version="1.34.0"; sha256="1kfgb6hwxsb4v6ls7y08vrbr16aihi2blap8mbll6zfdjhwji47d"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; + CSAR = derive2 { name="CSAR"; version="1.38.0"; sha256="1kb200kp3mv89ml3b5gdd2lsaparg5w98aycn2npb7r6811xlckw"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + CSSP = derive2 { name="CSSP"; version="1.24.0"; sha256="0ccariwsgkqxcnlavl605bihkqsdh3d9bz86bvggqahf3w6ycx2k"; depends=[]; }; + CTDquerier = derive2 { name="CTDquerier"; version="1.5.0"; sha256="1p8vx60gmjv2n74xd1v52r8rkmfpinjy1a5lmxg96dxx8j5xqj1k"; depends=[BiocFileCache ggplot2 gridExtra igraph rappdirs RCurl S4Vectors stringdist stringr]; }; + CVE = derive2 { name="CVE"; version="1.11.2"; sha256="1jlgx707c8mb4il5mf0y4wqqqijh2jfngrp52nfz55xifjx10v93"; depends=[ape ConsensusClusterPlus ggplot2 gplots jsonlite plyr RColorBrewer RTCGAToolbox shiny tidyverse WGCNA]; }; + CancerInSilico = derive2 { name="CancerInSilico"; version="2.6.0"; sha256="07qdrl6l6c5pxf1siahmwiv7l3inaljcm5kzb34k11xksj48lrg7"; depends=[BH Rcpp]; }; + CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.28.0"; sha256="020qxf0102dhv3340rgl7bsabfjypdb3402minmfig6bycibj99p"; depends=[AnnotationDbi limma qvalue]; }; + CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.12.0"; sha256="022515wbm5fsfkrb4bfi6lixlm5ca2mlz7hw2rasc3vf6k45gfq5"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust SNFtool survival]; }; + Cardinal = derive2 { name="Cardinal"; version="2.4.0"; sha256="177inzm4i1nyfrnb5790w75m33lxg9afzdry1y2vm2kwrfdznny8"; depends=[Biobase BiocGenerics BiocParallel dplyr EBImage irlba lattice magrittr Matrix matter mclust nlme ProtGenerics S4Vectors signal sp viridisLite]; }; + Category = derive2 { name="Category"; version="2.52.1"; sha256="0ga0ij9hyzsxa5pavwmv35i8xggia2wygrk4m4z8an0qcvgy3v5g"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; + CausalR = derive2 { name="CausalR"; version="1.18.0"; sha256="1kihi3yq8992p94g7a1r5jp7lm7s5bgjl68fpxmz8nzn436mamfx"; depends=[igraph]; }; + CellBench = derive2 { name="CellBench"; version="1.2.0"; sha256="0a4y2wibr0qnci0xg2bpp73idvh3aip87b6rfmxsq17762r8npb8"; depends=[BiocFileCache BiocParallel dplyr glue lubridate magrittr memoise purrr rappdirs rlang SingleCellExperiment tibble tidyr]; }; + CellMapper = derive2 { name="CellMapper"; version="1.12.0"; sha256="028vv2pzyighvjdc9b1160qw7wyaih8jqn72i78c404vg30k2vri"; depends=[S4Vectors]; }; + CellMixS = derive2 { name="CellMixS"; version="1.2.5"; sha256="02gvjcq45zc2blhxiffdlbxgk0mh1azd04vnzdyp11kcbllv4jk5"; depends=[BiocGenerics BiocNeighbors BiocParallel cowplot dplyr ggplot2 ggridges kSamples listarrays magrittr purrr scater SingleCellExperiment SummarizedExperiment tidyr viridis]; }; + CellNOptR = derive2 { name="CellNOptR"; version="1.32.0"; sha256="1r3njwmljyg0wp23qb5g0ys15niwi85lj5bksdrvjd4w1nqdkxfz"; depends=[ggplot2 graph hash igraph RBGL RCurl Rgraphviz stringi stringr XML]; }; + CellScore = derive2 { name="CellScore"; version="1.6.0"; sha256="1jrshfgmbyw1yvrqramix3bv2gldhzjg6r481vkba48pqx4cq3pn"; depends=[Biobase gplots lsa RColorBrewer squash]; }; + CellTrails = derive2 { name="CellTrails"; version="1.4.0"; sha256="197y5lcdvmbzvvwjlpr916lg8cij0yinlb6a7p1p5h3s400amwr3"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; }; + CexoR = derive2 { name="CexoR"; version="1.24.0"; sha256="0m5mcrax6qm9swigmsjij091dh5khzy3gxch22qsbklqr2j50z6p"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; + ChAMP = derive2 { name="ChAMP"; version="2.16.1"; sha256="1iy4mgrq0ibnnzxhgjs32hg8ccd9f30afw0g4n9axjgywfz5m94v"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel DT FEM GenomicRanges ggplot2 globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva kpmt limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; }; + ChIC = derive2 { name="ChIC"; version="1.6.0"; sha256="1mvix82v7prqs21xmpyai3g0kq18r4m3cvzjd86am1hagggr9bp5"; depends=[BiocGenerics caret caTools ChIC_data GenomicRanges IRanges progress S4Vectors spp]; }; + ChIPComp = derive2 { name="ChIPComp"; version="1.16.0"; sha256="0wk0vvg6dk9wk60lzbadrnqar75dppvyr4hiwrhv9rhhah2mg2mg"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; + ChIPQC = derive2 { name="ChIPQC"; version="1.22.0"; sha256="11g0s0hgacg5hs7gdllh69y58awxyi47nsvn9728c4cvbsiml0wk"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; + ChIPSeqSpike = derive2 { name="ChIPSeqSpike"; version="1.6.0"; sha256="0krqnq3bvn6mfpk12ysqhy883dnjcjmwvyjbngjrx83cl2a4zass"; depends=[BiocGenerics corrplot GenomicRanges ggplot2 IRanges LSD Rsamtools rtracklayer S4Vectors seqplots stringr]; }; + ChIPXpress = derive2 { name="ChIPXpress"; version="1.30.0"; sha256="025knahsx0b978g2kdgibf3z1jwjqaqb0ls9yipckzrf09a96h18"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; + ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.8.0"; sha256="1ghz5bdpaird9d4dlrkqwjdjpmbnq86gkiyc3kqbigrq7a0hwbna"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RcppRoll ROCR rtracklayer S4Vectors]; }; + ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.10.0"; sha256="044n6kn16qczpdhp0w0z5x8xpr0rfs9s8q70rafgnvj7a2q1xdd0"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; + ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.20.1"; sha256="0kmfha4vprbi0z6n7v9w28xfrqcx5qad7yfr0b316j5aj8v9f4hc"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager biomaRt Biostrings BSgenome DBI DelayedArray ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools rtracklayer S4Vectors seqinr SummarizedExperiment VennDiagram]; }; + ChIPseeker = derive2 { name="ChIPseeker"; version="1.22.1"; sha256="04ahwmch3a12xj2mv91znhdmkj84mbyw7imlln40m9gfs0k6j04l"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; }; + ChIPseqR = derive2 { name="ChIPseqR"; version="1.40.0"; sha256="1vdwp3qnpsrvrhxq6ynyp1cvi9zm02b19j119335z4bp0r17f0li"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; + ChIPsim = derive2 { name="ChIPsim"; version="1.40.0"; sha256="100zwbg88zqcp4g8bsndl4j70wc0g6hchnrrnkmz8k11dl2b24q7"; depends=[Biostrings IRanges ShortRead XVector]; }; + ChemmineOB = derive2 { name="ChemmineOB"; version="1.24.0"; sha256="0i9a9w57lj6jkyw34ni6mzgdc1r3008407ahawdap33n013ql5kz"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; + ChemmineR = derive2 { name="ChemmineR"; version="3.38.0"; sha256="1j6vmkhc03dmmkm5wgbcv62pw5dclp49f906xkx1pwg27bdldbga"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra png Rcpp RCurl rjson rsvg]; }; + Chicago = derive2 { name="Chicago"; version="1.14.0"; sha256="09m06y08vf3cnvg3k85gigijwyqx9fc09jks3mpvf3bq3ggdi58a"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; + ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.40.0"; sha256="0q2ib9xw69a4q74hpjmw8hxjn42ns7gfbc0sh4879zb3z1ay1r0q"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; + ClassifyR = derive2 { name="ClassifyR"; version="2.6.1"; sha256="1s2ncf5q2bmrr8vbhaznyzc5w09c619ijl3rc9drnzswpfxbsvqr"; depends=[BiocParallel locfit MultiAssayExperiment plyr S4Vectors]; }; + Clomial = derive2 { name="Clomial"; version="1.22.0"; sha256="15zf6pkcii7f314fws7ff9ca6prjdvd4j3cg5wrg7y98387p8bgm"; depends=[matrixStats permute]; }; + Clonality = derive2 { name="Clonality"; version="1.34.0"; sha256="16nvnax20s7lyak8fwraxbpnf8zmbw37qjb4sigrsl44dh9552ci"; depends=[DNAcopy]; }; + CluMSID = derive2 { name="CluMSID"; version="1.2.0"; sha256="18n31midv8c23hw7ij24663hjmwq5h1r13jp9mbqhji1zw3s9vrp"; depends=[ape Biobase dbscan GGally ggplot2 gplots MSnbase mzR network plotly RColorBrewer S4Vectors sna]; }; + ClusterJudge = derive2 { name="ClusterJudge"; version="1.8.0"; sha256="1pl1zw631csx4a561mz7bwndjhyviaz8jxq7f9c9majgk9pyr8jm"; depends=[httr infotheo jsonlite lattice latticeExtra]; }; + ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.14.0"; sha256="1ibfhhq9m39h704gryxv331as24jzacs5wfysjcppirnr45cnka5"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; + CoCiteStats = derive2 { name="CoCiteStats"; version="1.58.0"; sha256="03qjwwmqnsrnck44mf0axv8y7c2hxn1xszp9z0z65ia0g8vh2dxb"; depends=[AnnotationDbi org_Hs_eg_db]; }; + CoGAPS = derive2 { name="CoGAPS"; version="3.6.0"; sha256="0nipjgf75g51bsd1mzr72mldd38jiw5zzf2kvwdzpqllxwvd4vw1"; depends=[BiocParallel cluster gplots RColorBrewer Rcpp rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + CoRegFlux = derive2 { name="CoRegFlux"; version="1.2.0"; sha256="1zbscr6yscpmhkyacjc856lzbika1w91cpkp26sc50kicaq3zg3i"; depends=[CoRegNet sybil]; }; + CoRegNet = derive2 { name="CoRegNet"; version="1.24.0"; sha256="0glv6sf7ga2j23j2h3n01cx9l5hwz3s3kpr4kbv6jwj3zas2ckj6"; depends=[arules igraph shiny]; }; + CompGO = derive2 { name="CompGO"; version="1.22.0"; sha256="00awn7h4xcy70zlc8ijclhfhs25s4kw4mmii4r814jj3yddih353"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="2.2.0"; sha256="1pj6a6rmqckk033pkklk6hr4066rzavamy6w194rfdhind90rk0p"; depends=[circlize clue colorspace GetoptLong GlobalOptions png RColorBrewer]; }; + ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.50.0"; sha256="0pnh5zy6d3c364xxjdn5zp3kf5afhsxv6yzkdn1qspny0pmqlrp4"; depends=[ALL Biobase cluster]; }; + CopyNumberPlots = derive2 { name="CopyNumberPlots"; version="1.2.3"; sha256="1bixw2cb9b120d7anrkpzgdqzxscrim838m1kjffmadypwigixj3"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges karyoploteR regioneR rhdf5 Rsamtools SummarizedExperiment VariantAnnotation]; }; + CopywriteR = derive2 { name="CopywriteR"; version="2.18.0"; sha256="0llg1zpxg7qnvja5f5w1z1xic0jdg6zc4mfn97h2sm44skxxcyl1"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; + CorMut = derive2 { name="CorMut"; version="1.28.0"; sha256="1s3b5g167bd8xf7aivv1yn5a2mvzajnw7c23nmqm9alsw416s491"; depends=[igraph seqinr]; }; + Cormotif = derive2 { name="Cormotif"; version="1.32.0"; sha256="0im6acb1zl8ad7xd37zalzb4qbn37sjv8j86pycwg1dr5wcpnc1j"; depends=[affy limma]; }; + CountClust = derive2 { name="CountClust"; version="1.14.0"; sha256="0ang7ivgw1gnn75135fpjn5p919zn1nkwqymnrhl8vr3l8c0j0w6"; depends=[cowplot flexmix ggplot2 gtools limma picante plyr reshape2 slam SQUAREM]; }; + CoverageView = derive2 { name="CoverageView"; version="1.24.0"; sha256="0s47svs7xnr9jkylq0dxidqrigihdddiprcl0951vjr4w7kmb5nf"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; + CrispRVariants = derive2 { name="CrispRVariants"; version="1.14.0"; sha256="1wjgfhv49nkfhr5i4yf2svdb9v065hbcpbid035il7cy9kkn776q"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; + CrossICC = derive2 { name="CrossICC"; version="1.0.0"; sha256="0rrrrd0bsvagy5rjf6fkkry2cf6qhjf2glhdj399jjpfgssb3vjq"; depends=[Biobase cluster ConsensusClusterPlus data_table dplyr limma MASS MergeMaid]; }; + CytoDx = derive2 { name="CytoDx"; version="1.6.0"; sha256="02vj0mf8prbav80pqvbll77akdgxr3g70izgln93c3wjnbz7gq6z"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; }; + CytoML = derive2 { name="CytoML"; version="1.12.0"; sha256="0m8x18wkvis85cawv7j07pk59w76wnzy93ia99gd24j82z4h97p1"; depends=[base64enc BH Biobase corpcor cytolib data_table dplyr flowCore flowWorkspace ggcyto graph jsonlite lattice ncdfFlow openCyto plyr RBGL Rcpp RcppParallel Rgraphviz RProtoBufLib RUnit XML yaml]; }; + DAPAR = derive2 { name="DAPAR"; version="1.18.5"; sha256="1c1adakhmpqdcinm6c436ii6q2bww7jyp7iakgiaqwg3v1cbpzbv"; depends=[AnnotationDbi Cairo clusterProfiler cp4p DAPARdata doParallel dplyr factoextra FactoMineR foreach ggplot2 gplots graph highcharter igraph imp4p impute knitr lattice limma lme4 Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer readxl reshape2 scales siggenes stringr tidyr tmvtnorm vioplot visNetwork vsn]; }; + DART = derive2 { name="DART"; version="1.34.0"; sha256="11fl2dmlihafsdrzcsd1p6kcnwigq5gd4cn661dq2d1vy1frg9ng"; depends=[igraph]; }; + DBChIP = derive2 { name="DBChIP"; version="1.30.0"; sha256="1mr5s8j7zn3vbfrw50zd1x2z92x7j6cgn6qkcw8cccj81yivphkv"; depends=[DESeq edgeR]; }; + DChIPRep = derive2 { name="DChIPRep"; version="1.16.0"; sha256="0v1dy0d4yr3iyxasdi4rwhq7dfi44sif07ws4i04cha6yns1nays"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; }; + DECIPHER = derive2 { name="DECIPHER"; version="2.14.0"; sha256="04g6clqq0qgcb8c0i50qva6jc6dc9h9a3hlrdzwacbm75nk2lkbw"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; + DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.6.0"; sha256="1xarraz1gyhf7ik3fh4vsayi7qp21xdvqqp2fd5l86iy0541wxl7"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; }; + DEDS = derive2 { name="DEDS"; version="1.60.0"; sha256="0vzsmah2lhxf8k6n4d0i4j609sbvygmb6ii2ridg9z3nskwkrhp8"; depends=[]; }; + DEFormats = derive2 { name="DEFormats"; version="1.14.0"; sha256="06q341w9bvdkfysmpcx2k9qkxih1c0x7c6ynch1dck7c3x28gyvs"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; }; + DEGraph = derive2 { name="DEGraph"; version="1.38.0"; sha256="1ll3bc4q1rnfq8cn6ya97wcaz3bi7ajwvjsgqfwqgaj4nv2chnjc"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; + DEGreport = derive2 { name="DEGreport"; version="1.22.0"; sha256="0hjqj6v19h14ailszr4rgh56fi9hsgmc8p50mvcswqzdn3mjs7dv"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr lasso2 logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; }; + DEGseq = derive2 { name="DEGseq"; version="1.40.0"; sha256="05rqkx1654k072wb2c04jiq99s81f0ipagwfklgdlicfxsm52fpb"; depends=[qvalue]; }; + DEP = derive2 { name="DEP"; version="1.8.0"; sha256="1xiwr5r6s3mri8birykl77i7q0nw96q1hfhajbij4nn0ca60xa0m"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; + DEScan2 = derive2 { name="DEScan2"; version="1.6.0"; sha256="0zmcmap3acbc618k6jb6sppglz4n7kbnlbbg26wblm9l0qk79xp9"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; }; + DESeq = derive2 { name="DESeq"; version="1.38.0"; sha256="14pys93gsl50xmq5pc7pp1g20v3ywlg0yzkkhwb3kiy8573xn9nc"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; + DESeq2 = derive2 { name="DESeq2"; version="1.26.0"; sha256="1lmbhznfs8dz9ipd53z4ccwvwxqwzx1ayw56jlrvlsambaj8fash"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; + DEWSeq = derive2 { name="DEWSeq"; version="1.0.4"; sha256="0l6ll3kwdziihn36qrj92fl0s0ln2mjz4a82gy45k1ch4flhy05x"; depends=[BiocGenerics BiocParallel data_table DESeq2 GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment]; }; + DEXSeq = derive2 { name="DEXSeq"; version="1.32.0"; sha256="0sqqb65ckliif2nmvlvc7w49id59z0nvqcdz5gry8l2mn6azrf6a"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; + DEqMS = derive2 { name="DEqMS"; version="1.4.0"; sha256="195nnrfw97jr63j8vpil1axny55r6rk3aahsy93w01gm7fgri8im"; depends=[ggplot2 limma]; }; + DEsingle = derive2 { name="DEsingle"; version="1.6.0"; sha256="05ygzpb24swdxipkk5vp1y887xa7ndz113mfi9gxzhrr6y5cgfhq"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; }; + DEsubs = derive2 { name="DEsubs"; version="1.12.0"; sha256="13hfn8rxf42hz81cdmplki0pfz49685jhbzzw3inccxg2sllkg2j"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; }; + DFP = derive2 { name="DFP"; version="1.44.0"; sha256="0zsnw9nqgfldb378631lp13liyaxrjkhn09j2b6x8ihdf2ny419j"; depends=[Biobase]; }; + DMCFB = derive2 { name="DMCFB"; version="1.0.0"; sha256="0xy2q2wsj20xmbh6wbwy7yqp1zqa32xlga0imqscm0appgzm8z95"; depends=[arm benchmarkme BiocParallel data_table fastDummies GenomicRanges IRanges MASS matrixStats rtracklayer S4Vectors speedglm SummarizedExperiment tibble]; }; + DMCHMM = derive2 { name="DMCHMM"; version="1.8.0"; sha256="0gnp0jdmazv4imfgzkxc2zandajiaxj9g55brpfzf0b7ygxb5q6j"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; + DMRScan = derive2 { name="DMRScan"; version="1.11.0"; sha256="0vjhggyq0r8kab8ykl87js30l4zbavy224sg3in8fddakmijasaf"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; + DMRcaller = derive2 { name="DMRcaller"; version="1.18.0"; sha256="1l0675z5kyj8pijnr2iywja4vsi7ia380hwna12xyxxsrzz9kgn2"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; + DMRcate = derive2 { name="DMRcate"; version="2.0.7"; sha256="120z0wsx1aab6bjjgikl5kmxbz9lqwz6i7b631xdy5gag9m9c6vl"; depends=[bsseq DSS edgeR ExperimentHub GenomeInfoDb GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors SummarizedExperiment]; }; + DMRforPairs = derive2 { name="DMRforPairs"; version="1.22.0"; sha256="07714d3ky5igxqqfzn2i8n4ghri77d43kx6qrhkc9jb7k18cl8zd"; depends=[GenomicRanges Gviz R2HTML]; }; + DNABarcodeCompatibility = derive2 { name="DNABarcodeCompatibility"; version="1.2.0"; sha256="1ycda02mzcbr53jipj63zkp7kgg2dq7dbbc9yzb8r49xiz6i5fcd"; depends=[DNABarcodes dplyr numbers purrr stringr tidyr]; }; + DNABarcodes = derive2 { name="DNABarcodes"; version="1.16.0"; sha256="0r2r9qc2qvf7rfl1h5ynvv3xd7n444zbc697s85qxqdpr4sxqmfd"; depends=[BH Matrix Rcpp]; }; + DNAcopy = derive2 { name="DNAcopy"; version="1.60.0"; sha256="119z5lqhhw9ppg6s4dvbxk1kxf3wc55ibpm9b88c91s04yd7m9yw"; depends=[]; }; + DNAshapeR = derive2 { name="DNAshapeR"; version="1.14.0"; sha256="1blvfzc1xx11017p12p5s2m26gspc4v2s5pr4i7xhixzvircknbi"; depends=[Biostrings fields GenomicRanges Rcpp]; }; + DOSE = derive2 { name="DOSE"; version="3.12.0"; sha256="0ss8mr28q0vswxjmhcas0aqag5nl099jbyn5w3ypbbxqwfvf9jj5"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim qvalue reshape2 S4Vectors]; }; + DRIMSeq = derive2 { name="DRIMSeq"; version="1.14.0"; sha256="1s0f4n78s4ry18x77qb2p02ks7g2wr95q9nfqd78f1ifidn0wq5k"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; + DSS = derive2 { name="DSS"; version="2.34.0"; sha256="1j0ywiri9srpp46043cdi02qsb7jijch274vr66fbdmmkkhx3p1k"; depends=[Biobase bsseq DelayedArray]; }; + DTA = derive2 { name="DTA"; version="2.32.0"; sha256="1qp8cn661xj8lzafqpgc1n4ddkrbfq74kirxpf53nhrr15wm5y7l"; depends=[LSD scatterplot3d]; }; + DaMiRseq = derive2 { name="DaMiRseq"; version="1.10.0"; sha256="0gghifpdkq323mgagqicvfc3pfpzh5n9f09gzpl1gc7jj4jpj6q8"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; }; + DeMAND = derive2 { name="DeMAND"; version="1.16.0"; sha256="1c2ac14asgkxjwlh0657s2sp54sjxdk0ggc0wf5gc888fw0lyi6w"; depends=[KernSmooth]; }; + DeMixT = derive2 { name="DeMixT"; version="1.2.5"; sha256="0x6sw9c03blm4hraj44ijxjwizq7ms94q2038bsc67isfcl31vb5"; depends=[base64enc ggplot2 KernSmooth knitr matrixcalc matrixStats Rcpp SummarizedExperiment truncdist]; }; + DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.28.0"; sha256="00hcasjypi3ramb90b78h8pvnv11kian2cygvdhljnz8d41pq5x7"; depends=[ggplot2 limSolve pcaMethods]; }; + DeepBlueR = derive2 { name="DeepBlueR"; version="1.12.0"; sha256="06flk1l768zn42dhxjwklsgi8k7addskmg70d19ja80wwzksdixq"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; + DelayedArray = derive2 { name="DelayedArray"; version="0.12.2"; sha256="09lackgix5jpm16k0mz2zkibflfb4wzidbz4q32mlxmklf40037q"; depends=[BiocGenerics BiocParallel IRanges Matrix matrixStats S4Vectors]; }; + DelayedDataFrame = derive2 { name="DelayedDataFrame"; version="1.2.0"; sha256="05v3fj3krhc6ihb8jjlzxwdd3f1q5n97m13i02h9c8b6s00v4kbh"; depends=[BiocGenerics DelayedArray S4Vectors]; }; + DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.8.0"; sha256="0mv2rl6a6l404piabcazxz1s6ars016pxhjf5v40hhr6y1r0wbqy"; depends=[BiocParallel DelayedArray HDF5Array IRanges Matrix matrixStats S4Vectors]; }; + DepecheR = derive2 { name="DepecheR"; version="1.2.2"; sha256="199j2kw0xnw7y4v1gakm2jgyc7zzlj8xh0570f2yjq55gp1kggbm"; depends=[beanplot doSNOW dplyr FNN foreach ggplot2 gplots MASS matrixStats mixOmics moments Rcpp RcppEigen reshape2 robustbase viridis]; }; + DiffBind = derive2 { name="DiffBind"; version="2.14.0"; sha256="1729wyi2l4480yrkp5wg3ryirrmlk0j3njqs1qyckq3c8bjk12h2"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges ggplot2 ggrepel gplots IRanges lattice limma locfit RColorBrewer Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment systemPipeR]; }; + DiffLogo = derive2 { name="DiffLogo"; version="2.10.0"; sha256="0nhj1v7z037ck72pyq2wg1rix7k5fl7qb8m9x2y7d4yz6vif95v8"; depends=[cba]; }; + Director = derive2 { name="Director"; version="1.12.0"; sha256="0cpqqdcr4103mixk00dr4bgbpydicgl1q44plrkc42aqjr62w8vb"; depends=[htmltools]; }; + DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.28.0"; sha256="0knmncmkkf2ypyqfcl5s8nmyyf9nrzkqprzn9w3w8182c0v49r0s"; depends=[BiocGenerics IRanges S4Vectors]; }; + DiscoRhythm = derive2 { name="DiscoRhythm"; version="1.2.1"; sha256="0jih8cp69ql5wd6s7il8116in0prgbpafp8v3j7mcnbax0k55g46"; depends=[BiocGenerics BiocStyle broom data_table dplyr DT ggExtra ggplot2 gridExtra heatmaply kableExtra knitr magick matrixStats matrixTests MetaCycle plotly reshape2 rmarkdown S4Vectors shiny shinyBS shinycssloaders shinydashboard shinyjs SummarizedExperiment UpSetR VennDiagram viridis zip]; }; + DominoEffect = derive2 { name="DominoEffect"; version="1.6.0"; sha256="0a5m28asw4mkghgxr4rpyrj2b69hja6a31li29a803flwv5kkzgg"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; }; + Doscheda = derive2 { name="Doscheda"; version="1.8.1"; sha256="0skwb0dx1xyx4948wgps80l307z0rdh366fsn6vh4s90kff7asc3"; depends=[affy calibrate corrgram d3heatmap drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; }; + DriverNet = derive2 { name="DriverNet"; version="1.26.0"; sha256="1ah4ng7yw5as09gkk3qvvmsxc2v93qbg224rj7jf0mcjxn4gb8z7"; depends=[]; }; + DropletUtils = derive2 { name="DropletUtils"; version="1.6.1"; sha256="1kyx3ssvk49816m9s2pfwl654254y76256k8wz2wpn3q7shacvw7"; depends=[beachmat BH BiocParallel dqrng edgeR HDF5Array Matrix R_utils Rcpp rhdf5 Rhdf5lib S4Vectors SingleCellExperiment]; }; + DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.28.0"; sha256="1h1gha2qxrr8ngzf0an5mm9w264rw8p57fxxcb01nramy0gfw0jm"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; + DupChecker = derive2 { name="DupChecker"; version="1.24.0"; sha256="0sqa8m1iiglw3p6d9pvy853p3nzz8krxq34wq5xcsx45gyswycdn"; depends=[R_utils RCurl]; }; + DynDoc = derive2 { name="DynDoc"; version="1.64.0"; sha256="1pii36icj5w6bwzlxnkl431wqjh30b69rmnahjsjld26999kr5lc"; depends=[]; }; + EBImage = derive2 { name="EBImage"; version="4.28.1"; sha256="0q54q2nw6p1s4nrj1l8qz78m67xcysj2x82zs43my8iv2g9iifgs"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; + EBSEA = derive2 { name="EBSEA"; version="1.14.0"; sha256="0jw7ka2ls5a2jzj18cdx7cpwxckpak1xlw36lqs5ny2pygv3ga5w"; depends=[edgeR limma plyr]; }; + EBSeq = derive2 { name="EBSeq"; version="1.26.0"; sha256="0ay1vcccpc29r3vinlnwp9256345bfb346kg2y11kib4bnrabjb6"; depends=[blockmodeling gplots testthat]; }; + EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.20.0"; sha256="00n5dlqdzhr01g06a5gffv8p5ii8wdzmh68jdwdr21magmv0psba"; depends=[EBSeq]; }; + EBarrays = derive2 { name="EBarrays"; version="2.50.0"; sha256="063rhsdp8x0f881kslq06zxfp6b2qabrz4vmfrn8a4v3pd3n7s13"; depends=[Biobase cluster lattice]; }; + EBcoexpress = derive2 { name="EBcoexpress"; version="1.30.0"; sha256="0xjzwsd80qak606d85wjbgvib9zljpl2xjdj79d3fcvwl2ml1vgc"; depends=[EBarrays mclust minqa]; }; + EDASeq = derive2 { name="EDASeq"; version="2.20.0"; sha256="19mgzbv8yxgvw86wpq401l27q55ygawlngl775yavwccz1zbhjnj"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics BiocManager biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; + EDDA = derive2 { name="EDDA"; version="1.24.0"; sha256="1pqxynm35dxsw22qb1pmx3vh5mp8s6jg2j2llq9xk37sahj0vgcm"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; + EGAD = derive2 { name="EGAD"; version="1.14.0"; sha256="09hnfvdh4mvhapkm8p3pvrnscw4d0kgq38bp6kkqf2vvcacll1rh"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; }; + EGSEA = derive2 { name="EGSEA"; version="1.14.0"; sha256="0srkfa6c5z5s3a4gvdvciycr5qd6m79mc50prxfpp9givxd96r3d"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; + ELBOW = derive2 { name="ELBOW"; version="1.22.0"; sha256="12nfivvbl9mb5m4vikwl8k72d5ijk7i460xm2q4dllrrxxngi8i6"; depends=[]; }; + ELMER = derive2 { name="ELMER"; version="2.10.0"; sha256="0bhm7f69sfiya4jk4sg8y75g7wb79cjyc0rjb9nlnyaipd7m8qg0"; depends=[biomaRt circlize ComplexHeatmap DelayedArray doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr progress purrr readr reshape rmarkdown rtracklayer rvest S4Vectors scales stringr SummarizedExperiment TCGAbiolinks tibble tidyr xml2]; }; + EMDomics = derive2 { name="EMDomics"; version="2.16.0"; sha256="0w808f1rs4d5ld7zds53wm7bvjj88iirhwsb3bqnm5g54mmzqykr"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; + ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.12.1"; sha256="0brnlj89d6is0pbrwln1zhiiyprsggzr32xm38hxk9xsh8sl202v"; depends=[AnnotationHub data_table dplyr GenomeInfoDb GenomicRanges jsonlite RCurl rtracklayer S4Vectors stringi stringr tidyr]; }; + ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.34.0"; sha256="1riv8l6afdqd986w77y6wi5h07awqf0x69q7g71qziag8hkbr8zm"; depends=[rJava XML]; }; + ENmix = derive2 { name="ENmix"; version="1.22.4"; sha256="157n7s3d60q2x1agj5344ig0iyc9d43qsq74sb51mml2imqjzawa"; depends=[AnnotationHub Biobase doParallel dynamicTreeCut ExperimentHub foreach genefilter geneplotter gplots illuminaio impute irr matrixStats minfi preprocessCore quadprog RPMM S4Vectors SummarizedExperiment]; }; + ERSSA = derive2 { name="ERSSA"; version="1.4.0"; sha256="0azj6zgxnf4bjn3n5zigfp0d4nq21zj63v85bjyq677nja3rwiim"; depends=[BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; }; + EasyqpcR = derive2 { name="EasyqpcR"; version="1.28.0"; sha256="0qjskwbj98iisadjli84y90isc2sxxw7bhvd6yknch5dq5ll7jp6"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; }; + EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.14.0"; sha256="1z9gj437z6z6afb1qpsbkvppai6rahp6rl1vhbs0zq8lqw8bvhb7"; depends=[]; }; + EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="1.4.0"; sha256="1vyrgj8yd69ji0anfyqfcrzds2w5scl0cg4bdfiild15wg95mkkh"; depends=[ggplot2 ggrepel]; }; + EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.16.0"; sha256="07bkn5a8j2d621qszdp5jsikg4s4qzfwri9ixscks5gsrb9346f8"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; + EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.16.1"; sha256="1c8w68ij9a8p8c4hf4abl51lbrav9zvllh4sifqz1r1lmxka2zrh"; depends=[AnnotationDbi BiocFileCache biocGraph BiocManager ComplexHeatmap edgeR geneplotter GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma pathview rappdirs Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; + EpiDISH = derive2 { name="EpiDISH"; version="2.2.2"; sha256="110bcrkrl47h07i9wy11p0ip0lwd0kig5anbgrcvhpwy4rqqdfi2"; depends=[e1071 locfdr MASS matrixStats quadprog stringr]; }; + EventPointer = derive2 { name="EventPointer"; version="2.4.0"; sha256="1xn5r988ynddyaiik3g16pfnh665b8srrwq0jlq4v7hbszvnsh04"; depends=[affxparser Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg38 cobs doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph IRanges limma MASS Matrix matrixStats nnls prodlim qvalue RBGL rhdf5 S4Vectors SGSeq stringr SummarizedExperiment]; }; + ExCluster = derive2 { name="ExCluster"; version="1.4.0"; sha256="15acwm4jnmyqjf0arqh130yakz183pli710xjkzvci8a6k68k7x4"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; }; + ExiMiR = derive2 { name="ExiMiR"; version="2.28.0"; sha256="1xyvwlf14k9h7mp22h2jinw1qjpixsz5v3jsazhf5hrnkka1kah8"; depends=[affy affyio Biobase limma preprocessCore]; }; + ExperimentHub = derive2 { name="ExperimentHub"; version="1.12.0"; sha256="054w2lkyirbmhgia0rp4nk9zzw3zphz6jxg6fc9zlarp90g64z24"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocManager curl rappdirs S4Vectors]; }; + ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.12.0"; sha256="106jficagk6r3clhijjdb92awkndpz7f7n3iyj5bdmss7si5aay6"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocManager biocViews curl DBI ExperimentHub graph httr S4Vectors]; }; + ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.14.0"; sha256="14vqb2l5ra1v90r7ka02d0mir1vm9p6jxsvkgj2v87l7bszkirlb"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; + ExpressionView = derive2 { name="ExpressionView"; version="1.38.0"; sha256="1qqcwwps4g2q69wb66m4kvabfd2cchwl4mmz0b67hff14w2bxyk0"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; + FCBF = derive2 { name="FCBF"; version="1.4.0"; sha256="1jy8k2cidnwjij3b89z36l4laz9fvixi50xw3xhikds8q522q7ij"; depends=[ggplot2 gridExtra mclust pbapply SummarizedExperiment]; }; + FELLA = derive2 { name="FELLA"; version="1.6.0"; sha256="0fknngg3mvb8yp9rw8bv1583iv32xms2fk694k7825k4zaw7zav0"; depends=[igraph KEGGREST Matrix plyr]; }; + FEM = derive2 { name="FEM"; version="3.14.0"; sha256="0r95q6b9sz9wkd9sq9xnzg0s2p1vn6p5vdh2f7z4cb8i14gavfcv"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; + FGNet = derive2 { name="FGNet"; version="3.20.0"; sha256="0badapighhs9j281pr8g45yy8birsvkiqaclv1dakm9rrzd009cf"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; + FISHalyseR = derive2 { name="FISHalyseR"; version="1.20.0"; sha256="0wppdgxfnm96mh9mynvc1hj27cnnsdr5pdvrrl7z3yb45rzdcfmq"; depends=[abind EBImage]; }; + FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.22.0"; sha256="0ka4213mhi9xy4j1m1py45p62qy14rmr8dpgjbwpwpnp9xw3a91s"; depends=[fda MASS]; }; + FamAgg = derive2 { name="FamAgg"; version="1.14.0"; sha256="1pdgs23lrzn91lcy4kk9dmihsn7zk0q2fl6ii96ldq9hggd5vmnd"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; + FastqCleaner = derive2 { name="FastqCleaner"; version="1.4.0"; sha256="14shi7mjbl5239pf79sf4f81h7pqkm96sw50wfqiq05nsxzdq5wc"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; }; + FindMyFriends = derive2 { name="FindMyFriends"; version="1.16.0"; sha256="0h4map6xb1aasmmx0dxv452zzvcqpk481sbr64c8hwh203a4m1a7"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; + FitHiC = derive2 { name="FitHiC"; version="1.12.0"; sha256="1irwkwi4afdj395134k31mvx7c2vpdd0rv8zrblnldascdsb04kc"; depends=[data_table fdrtool Rcpp]; }; + FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.18.0"; sha256="1kkpmnq2446sf8b9isy5vki39vgqmjaf2jh9h36d9xpxf0qfibmc"; depends=[jsonlite RCurl XML]; }; + FlowSOM = derive2 { name="FlowSOM"; version="1.18.0"; sha256="0265sq4zvj6d6h5ghqj9xzm4b0z9v65kgyl88cgdcpdkzfnfcvd5"; depends=[BiocGenerics ConsensusClusterPlus CytoML flowCore flowWorkspace igraph RColorBrewer tsne XML]; }; + FoldGO = derive2 { name="FoldGO"; version="1.4.0"; sha256="0bi805g4q833rpxyxl7gi53cv2gddvl1bgi1j21651sbinapdh5c"; depends=[ggplot2 tidyr topGO]; }; + FourCSeq = derive2 { name="FourCSeq"; version="1.20.0"; sha256="0rnlgvxyi32g6nng8pkdsd13xy4x09lv6zg64m82m9s1zfaksclm"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; + FunChIP = derive2 { name="FunChIP"; version="1.12.0"; sha256="092sisii6lf4pjsfsy9xnd87d6la4kh7cvwxcrqw89ir7a26igf8"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; }; + FunciSNP = derive2 { name="FunciSNP"; version="1.30.0"; sha256="16m2acjhj2y60wbzk07gbzx78j9ryg5ygpn7d5zqn3p7agnrpxv2"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + GA4GHclient = derive2 { name="GA4GHclient"; version="1.10.0"; sha256="1kr2nsqm50xhvvdgx5m9fnjk7c8w6rskqx6dn91ppxl858712h6a"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; }; + GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.8.0"; sha256="11l3mv8a747yidzx656a6xsqhjcfcjkd5jbw9m1ns803r0mm1bhb"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; }; + GAPGOM = derive2 { name="GAPGOM"; version="1.2.0"; sha256="17x14yjai6cs2gms2lf2kkw2yjzw3vd3bp03fg5qi7ysm6h88kmy"; depends=[AnnotationDbi Biobase BiocFileCache data_table dplyr fastmatch GEOquery GO_db GOSemSim graph igraph magrittr Matrix matrixStats org_Hs_eg_db org_Mm_eg_db plyr RBGL]; }; + GARS = derive2 { name="GARS"; version="1.6.0"; sha256="15j1vjldnmiv5kvf5lgf91h77z9i0dj0d5a171jynw3jnhs95fsa"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; }; + GAprediction = derive2 { name="GAprediction"; version="1.12.0"; sha256="0x44n8rqnmvszcjmwn1v2an2s21x7zg1yxvk9qppkpvc4k7zd5vp"; depends=[glmnet Matrix]; }; + GCSscore = derive2 { name="GCSscore"; version="1.0.0"; sha256="1jnd9h1cnp06lg34mcwqfhwcn47w3xi42q1m69qk6yg509vz2mdr"; depends=[affxparser AnnotationForge Biobase BiocManager data_table devtools dplR RSQLite stringr]; }; + GDCRNATools = derive2 { name="GDCRNATools"; version="1.6.0"; sha256="0109cwrdvh6nn6w3vcgk6z1nh30x9lwli21ydyqbp2rip1d4hrcn"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; }; + GDSArray = derive2 { name="GDSArray"; version="1.6.0"; sha256="1dc8lbwwxpxgyy6qn46hk3wcv9pa809rsg76ar9sjqv9hdvcp94l"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; }; + GEM = derive2 { name="GEM"; version="1.12.0"; sha256="0287m3ahc0s078vdqgynm8hnwvil75iyzj76803a52mlrrf7lizj"; depends=[ggplot2]; }; + GENESIS = derive2 { name="GENESIS"; version="2.16.1"; sha256="04zriqzzlvpqbw1jl7hnq9x7padbj7qvnxhvjsryx76yrfr0kzb0"; depends=[Biobase BiocGenerics data_table dplyr foreach gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; }; + GENIE3 = derive2 { name="GENIE3"; version="1.8.0"; sha256="0p67lhgy3lb4nc958s51hx7rvgwhzwfic9xhpsrask40k43spv7l"; depends=[reshape2]; }; + GEOmetadb = derive2 { name="GEOmetadb"; version="1.48.0"; sha256="16c6l5m75x8iypw1lm4psj2hbhadfk5zgw1fs52infpnb82fhsv9"; depends=[GEOquery RSQLite]; }; + GEOquery = derive2 { name="GEOquery"; version="2.54.1"; sha256="0j8mlldy7dc38fx5zwj6z6l4b9bhvrn8sil3z8asnd4ic7w9ifx5"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; + GEOsubmission = derive2 { name="GEOsubmission"; version="1.38.0"; sha256="0fji7sli5jl0b4xf8wlrf064b47q49lfdnxhjf8pnph353ymg3yy"; depends=[affy Biobase]; }; + GEWIST = derive2 { name="GEWIST"; version="1.30.0"; sha256="1d3y0xfi8l10k5wv0r9ja5d4yf7kks3jpvahkf4hv75qdjjl96ch"; depends=[car]; }; + GGBase = derive2 { name="GGBase"; version="3.48.0"; sha256="0i5k1id5mh0m38xp8wy3c5lj7xmqwwqcrw7diiz1nkk66qs9mh8l"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; + GGtools = derive2 { name="GGtools"; version="5.22.0"; sha256="0axxmiwahvsdjpq07ic9r3q4zvnp08cqksn8xfn06r9862432dkl"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; + GIGSEA = derive2 { name="GIGSEA"; version="1.4.0"; sha256="0z95v410bqpbamfkz74dg3pvlwf6azh1ryd3w92x7iqbwy6570ws"; depends=[locfdr MASS Matrix]; }; + GISPA = derive2 { name="GISPA"; version="1.10.0"; sha256="1j2va0jsgprys8w7a3qbr2sy50jdl5d5m17l9jmqmxz87s1v69x9"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; }; + GLAD = derive2 { name="GLAD"; version="2.50.0"; sha256="0p4gsy3kfhwdi0ddimswkw7yh2pgbkhcm3fnd77x3i35gm12v86l"; depends=[aws]; }; + GMRP = derive2 { name="GMRP"; version="1.14.0"; sha256="0ykvjdn809gg8l147sflma9g8sjd02l1d2zx7x7ajwc7zdzq1lxv"; depends=[diagram GenomicRanges plotrix]; }; + GNET2 = derive2 { name="GNET2"; version="1.2.0"; sha256="0ijwh22gy33nffs1iy82373ksmxk3gppzbv6kig85fj9ilvfcxxg"; depends=[DiagrammeR ggplot2 matrixStats Rcpp reshape2 SummarizedExperiment xgboost]; }; + GOFunction = derive2 { name="GOFunction"; version="1.34.0"; sha256="1ads9dnwhvdyys6dmscn9yp9fkm2lczqzwj4mb4llr0bv83lgvns"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; }; + GOSemSim = derive2 { name="GOSemSim"; version="2.12.1"; sha256="1r8yx6qw6d6602cp8aspzl3shi1l1zqcrc8fm9d5wg01sw1whs05"; depends=[AnnotationDbi GO_db Rcpp]; }; + GOSim = derive2 { name="GOSim"; version="1.24.0"; sha256="1k38kzdpp43fdwqbhniq74cz096chp72qxv57v0bl3ca3dck9hfb"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; + GOTHiC = derive2 { name="GOTHiC"; version="1.22.0"; sha256="0f2rylcc7d5m65ci9ia096wn4h92vn4f16aqikwagl4dy2w4s4y8"; depends=[BiocGenerics BiocManager Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; + GOexpress = derive2 { name="GOexpress"; version="1.20.0"; sha256="1y0hs8zad74n8fwdgndf1vplv7dq208c4sv6p5q9xf16q9xhc252"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; }; + GOfuncR = derive2 { name="GOfuncR"; version="1.6.0"; sha256="0hmi13pz923fm95asys615rih63b1i2nvynfczr1zcsc9fzn4h35"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; }; + GOpro = derive2 { name="GOpro"; version="1.12.0"; sha256="164fml5m9iclnwc7yb7jkr1kkd78pvmshfq8adz14xpcvhfvivm0"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; + GOstats = derive2 { name="GOstats"; version="2.52.0"; sha256="19f4gxm3sbprqrnwzvskvywv6j4ibm8xkrbgg4h0fvh2b5331nwc"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; }; + GOsummaries = derive2 { name="GOsummaries"; version="2.22.0"; sha256="124qpsic8bqdqsz9mdrp12dmlvnjdl4bdqiyq2ld5b727xg8rq9z"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; + GRENITS = derive2 { name="GRENITS"; version="1.38.0"; sha256="17g3r1xxwpgl7xdb6w1gx4mlhpwz8n3qabslsknljspglwvaqkmk"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; + GRmetrics = derive2 { name="GRmetrics"; version="1.12.0"; sha256="06k5va2d5jzab7ay3glcp5anjdv19vhcarnc371jnwmv9qnljjb3"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; + GRridge = derive2 { name="GRridge"; version="1.10.0"; sha256="08nhv5fvqbdx5ahlsvhdijaasqf8548pxawl5b2jiv5jr0nzsbr0"; depends=[glmnet graph Iso mvtnorm penalized survival]; }; + GSALightning = derive2 { name="GSALightning"; version="1.14.0"; sha256="0vil7njz9mjrf2hhb9vmwl6hf1ca3ipwk2yhfpymbjg84cppvja0"; depends=[data_table Matrix]; }; + GSAR = derive2 { name="GSAR"; version="1.20.0"; sha256="16acza67i1sk8jxprkpk8wy2d915cma24q41fx3sn2p12zbkwjaf"; depends=[igraph]; }; + GSCA = derive2 { name="GSCA"; version="2.16.0"; sha256="125r1qa82p56d3cz7z9ml76625yjw8p05hi6y3c1d5ifg8i2ddbv"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; + GSEABase = derive2 { name="GSEABase"; version="1.48.0"; sha256="0kcb90sxlf19d5dxhdbqk9x62svky4262cccl0wxarbq6gf3bd57"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; + GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.6.4"; sha256="0cqdmnxb78rj1ml1wy5gdnswpfcsqb703wy9ibp13m54lanqw4c6"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO rappdirs S4Vectors SummarizedExperiment]; }; + GSEAlm = derive2 { name="GSEAlm"; version="1.46.0"; sha256="0yf3m0mzv70l8xv2njb7siay8pj1lygk2wq60j4jprk36wpdq000"; depends=[Biobase]; }; + GSRI = derive2 { name="GSRI"; version="2.34.0"; sha256="0zcp48jhn804l882w40kgik8lfc0ffpjwlcyszc8iqnchq7cv0hk"; depends=[Biobase fdrtool genefilter GSEABase les]; }; + GSReg = derive2 { name="GSReg"; version="1.20.0"; sha256="07dyp4m87im2bacsbmycfyx387gk85aqnm86m61zd610kk2y5yms"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; + GSVA = derive2 { name="GSVA"; version="1.34.0"; sha256="1lx5lpppidxcxh9i6sq2f639bkcygl4rycagfa01y8gqay0klxam"; depends=[Biobase BiocGenerics geneplotter GSEABase shiny shinythemes]; }; + GUIDEseq = derive2 { name="GUIDEseq"; version="1.16.0"; sha256="1iif5k2phxb0h6wslv9yjacdrdbwb10mg9babapbl96vssgzjqrz"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; + GWASTools = derive2 { name="GWASTools"; version="1.32.0"; sha256="0mivgzgmgyjazd5hl5hy04gz3rvf9fiwwzvpc0j8xynsvf7gxy79"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; + GateFinder = derive2 { name="GateFinder"; version="1.6.0"; sha256="1csgik1a22kg68aghari27si9g3rv46a0pad46ip9j2hb5gk02jn"; depends=[diptest flowCore flowFP mvoutlier splancs]; }; + GenRank = derive2 { name="GenRank"; version="1.14.0"; sha256="02sb6acfz9z4n4mzb8cwa6yna8p5c8f0y7b1fpzdqz2c9l2v392h"; depends=[matrixStats reshape2 survcomp]; }; + GenVisR = derive2 { name="GenVisR"; version="1.18.1"; sha256="0bjxvm1lzd0p076l3hgagnsrzdngkh9kh3pkqr8gq8vxrj8wx24l"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI FField GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; }; + GeneAccord = derive2 { name="GeneAccord"; version="1.4.0"; sha256="0wz8ys89zxnjbys63xxmil6ny9qm02waqn55zizgr83pfz5139lj"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; }; + GeneAnswers = derive2 { name="GeneAnswers"; version="2.28.0"; sha256="1bzc2fdwr1c8rxxqqxcvysqa0amj226z9ji6rz21xizah045q35y"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; + GeneBreak = derive2 { name="GeneBreak"; version="1.16.0"; sha256="1jgp3b1w1fk4d9q4mmjc6iw60xs33n3x41mzzfjj9gdsjvckq126"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; + GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.32.0"; sha256="0gfqrcdd5s24axwmvrdjhmfb7jy0kyvf7mlffg71kryq17dc91wn"; depends=[Biobase PGSEA]; }; + GeneGA = derive2 { name="GeneGA"; version="1.36.0"; sha256="0bfc03p4v6nh2054v1h1vcx91j6hn5r7qipfkhvpmskdgbjh0yla"; depends=[hash seqinr]; }; + GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.12.0"; sha256="10d1nhq0kb9dzp0z4bda5128adfinp65qn8dwn7qyr9fc8r49s8c"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm plspm Rsamtools snpStats]; }; + GeneMeta = derive2 { name="GeneMeta"; version="1.58.0"; sha256="0iiyn5apv4dk1fs89b9xwhyxivc5gvc0ijh1pnq115abn1wb2b2k"; depends=[Biobase genefilter]; }; + GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.28.1"; sha256="1wxp86nqswz2h7h1wdy9kf9kl1l89c5vasv78rsnz1wn2rxbfzda"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; + GeneOverlap = derive2 { name="GeneOverlap"; version="1.22.0"; sha256="155jpv4r4xvkhsw9vrflmy8dyl7hvlki4dz8ccqzwhxxyz3id362"; depends=[gplots RColorBrewer]; }; + GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.42.0"; sha256="0wdrwks3qhiizf2iz4yq2f64jmbpzwlxkk3snwz893cafmnjw9g6"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; + GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.30.0"; sha256="1mplx4xlma7n4g1721l4ip9ynlw1f7479lpm57fb5aflmihjmlfn"; depends=[Biobase limma MASS survival]; }; + GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.6.0"; sha256="0bkc3pdbx42yj1jidppwy7mskghg31rg8m9vp2k87713vkd43gnk"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; }; + GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.54.0"; sha256="0lb798m0dbip1v7ala4jdi2ls93p7nj7hv6mpxkwvk882kw8r3f6"; depends=[gmodels gtools mvtnorm]; }; + GeneticsPed = derive2 { name="GeneticsPed"; version="1.48.0"; sha256="14qwq9366ssglh13926ngm8a0jf6n2xcdsmbxrhynx0m3042rm8n"; depends=[gdata genetics MASS]; }; + GenoGAM = derive2 { name="GenoGAM"; version="2.4.0"; sha256="1bfxyyw7akg13mgxg8m4q5bqzyzd3a0sivc7hx9mhjfbl9fxmjsi"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; }; + GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.46.0"; sha256="05vavhz936v7cknig2f2mn3fd9fiy54r3swlvifpawramblp1ags"; depends=[biomaRt]; }; + GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.22.0"; sha256="07zljs2mfi8rf31g903f43v2f7767xbnflfrx9qjnmgf7bm039x0"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; + GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.22.1"; sha256="065xvy4pkda0ajvl1b75iski95k1pnbhxwdq7vkfl8v55915vqh6"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; + GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.10.0"; sha256="1lz88gqdvmzppyinc1n3rs0ycx96fa8w8bmnndh25iyal111g4li"; depends=[dplyr GenomicRanges httr IRanges jsonlite magrittr rappdirs readr rlang S4Vectors SummarizedExperiment tibble xml2]; }; + GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.38.2"; sha256="0dd226kgks50jdx5w35f3wmg95hy8aibi4kcn8p5kmqp5i8j580b"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; + GenomicFiles = derive2 { name="GenomicFiles"; version="1.22.0"; sha256="1x6q827ms2l5lwzha1vsgfrshh35n9f19jq57xagrqlafxgpz86s"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.20.1"; sha256="140bp7c8p079xh5wwxmrq3a73pm6mdc9czq5w2gzjml7dgrca38a"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; + GenomicOZone = derive2 { name="GenomicOZone"; version="1.0.0"; sha256="08840yq6y2aclqad26pmd8kagicmbg0rr84h1f0x0pdcwlmaimps"; depends=[biomaRt Ckmeans_1d_dp GenomeInfoDb GenomicRanges ggbio ggplot2 gridExtra IRanges plyr Rdpack S4Vectors sjstats]; }; + GenomicRanges = derive2 { name="GenomicRanges"; version="1.38.0"; sha256="0xdds6ws7jjdfy4x3mb0qhy43kpxdmifmpw0jdk4wgw999zabb50"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; + GenomicScores = derive2 { name="GenomicScores"; version="1.10.0"; sha256="175iaqv7npa11yw48vmqpgx0qqs3g44c3dsya7ccwd1lg97fznkj"; depends=[AnnotationHub Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors XML]; }; + GenomicTuples = derive2 { name="GenomicTuples"; version="1.20.0"; sha256="02sglyvr6qhqazwxj6fq9w7g86f6q3nw2jmdni1wb3gdglxbbac2"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + Genominator = derive2 { name="Genominator"; version="1.40.0"; sha256="15qh2j2s063rahf0z9hgn49pm83kdaj24ncc8gbyac3jn650xm7a"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; }; + GladiaTOX = derive2 { name="GladiaTOX"; version="1.2.0"; sha256="1g9ph1vq3hyck8f3i6c4939y0gr8mgcvc745mzqa5n8pnnv53fs9"; depends=[brew data_table DBI ggplot2 ggrepel numDeriv RColorBrewer RCurl RJSONIO RMySQL RSQLite stringr tidyr XML xtable]; }; + Glimma = derive2 { name="Glimma"; version="1.14.0"; sha256="1rjrqgl96iz4b3xqpc174wgz7bqmc8gbm9ljag0y27kz29fwng8r"; depends=[edgeR jsonlite S4Vectors]; }; + GlobalAncova = derive2 { name="GlobalAncova"; version="4.4.0"; sha256="0q9h6vzv8jix5k0jbmkzldkcipq33fszgx5nhrc9bhkfqjzk95dc"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; }; + GmicR = derive2 { name="GmicR"; version="1.0.6"; sha256="0d1r99h9acqa9fgwmddmkql41fy8impabf2bg91fk0b37dsjch12"; depends=[AnnotationDbi ape bnlearn Category data_table DT GOstats gRain gRbase GSEABase org_Hs_eg_db org_Mm_eg_db reshape2 shiny WGCNA]; }; + GraphAT = derive2 { name="GraphAT"; version="1.58.0"; sha256="15mmg0hjnw6m147y5i43v76r1mixxb3xrszzq8x8zy15yna81012"; depends=[graph MCMCpack]; }; + GraphAlignment = derive2 { name="GraphAlignment"; version="1.50.0"; sha256="0gljds4ylkr39r79nxkxlhw1m36h05xkci1n54m65131ryjmprzd"; depends=[]; }; + GraphPAC = derive2 { name="GraphPAC"; version="1.28.0"; sha256="1aa7p9h55mvpa908d1jriiyf02das45cr1pib93pwcl6nw8jsgya"; depends=[igraph iPAC RMallow TSP]; }; + GreyListChIP = derive2 { name="GreyListChIP"; version="1.18.0"; sha256="126d5407k90ymph4vrrrgkfxhl4d9af2lmfk7szianrsglz58nnj"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; + Guitar = derive2 { name="Guitar"; version="2.2.0"; sha256="1avwad7mwncil6nlikks1ps3ivkphgab3kzc0y1l792z2c7qx14d"; depends=[AnnotationDbi dplyr GenomicFeatures GenomicRanges ggplot2 knitr magrittr rtracklayer]; }; + Gviz = derive2 { name="Gviz"; version="1.30.3"; sha256="0c9i26h5czm60n1bxzmdxxpywcj0sig6wcj913pb41mr83bbgra3"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; + HCABrowser = derive2 { name="HCABrowser"; version="1.2.0"; sha256="02yyl118abjzp1dk1bpb67rlrq4zd85nl8n4gi59mcrjiwj0q64i"; depends=[BiocFileCache curl dplyr googleAuthR httr jsonlite plyr readr rlang S4Vectors stringr tibble tidygraph tidyr]; }; + HCAExplorer = derive2 { name="HCAExplorer"; version="1.0.0"; sha256="0s0yxs6xic52zv0wl54rg8m55wl2b5inl1ci2f2rq87c7aqbjkf7"; depends=[curl dplyr httr jsonlite plyr rlang S4Vectors tibble tidygraph vctrs]; }; + HDF5Array = derive2 { name="HDF5Array"; version="1.14.3"; sha256="1z153a7nxmlml72pl1saasj2il9g5ahpynkpv3mkhhsvl5kbwbh6"; depends=[BiocGenerics DelayedArray IRanges Matrix rhdf5 Rhdf5lib S4Vectors]; }; + HDTD = derive2 { name="HDTD"; version="1.20.0"; sha256="1qxc2gjixsnrl1111x3jmkl8i78azjfq48igqrbz3b4p0261w7d0"; depends=[Rcpp RcppArmadillo]; }; + HELP = derive2 { name="HELP"; version="1.44.0"; sha256="1j7w7p6waym7qn6vsflf6dlwajbccfw7vhmpl7qzzgxb7aldl8pl"; depends=[Biobase]; }; + HEM = derive2 { name="HEM"; version="1.58.0"; sha256="1bq2a886rp7c28hd6gvk70xdl3fhrqaq73lp2xabxjd5ic7zwq2c"; depends=[Biobase]; }; + HIBAG = derive2 { name="HIBAG"; version="1.22.0"; sha256="1y7049ydj15g0qv5c1n6028cj8zgmvrj6c2g24xs6xy87600f98l"; depends=[]; }; + HIREewas = derive2 { name="HIREewas"; version="1.4.0"; sha256="0m39h8gkmdq6j0b24cbr9ppwbv4qpn729r9pdjkqzqg6k6fr0ph1"; depends=[gplots quadprog]; }; + HMMcopy = derive2 { name="HMMcopy"; version="1.28.0"; sha256="0q0wrzz6waya18b0bp6j3bknd61cl7jm8r3dxyag1pds1bfk1a8z"; depends=[data_table]; }; + HPAanalyze = derive2 { name="HPAanalyze"; version="1.4.3"; sha256="0xv6d3s5xzxbzw9wsm8xzdkm0l4jxrs7iq3j8bi4mlgqg5njir97"; depends=[dplyr ggplot2 gridExtra openxlsx tibble xml2]; }; + HTSFilter = derive2 { name="HTSFilter"; version="1.26.0"; sha256="14k70chzvkhzp0h5z24lsjrbcz4sa0k59hdv533zmq19hkmw17yq"; depends=[Biobase BiocParallel DESeq DESeq2 edgeR]; }; + HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.38.0"; sha256="1dc6avr58g90bq1vyz0pf5llh3pii162f8db12vcsm9v9b1bk4i6"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; }; + HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.16.0"; sha256="1qadcjwsxc8s1wqw5jf2c5d1ndpnkm3j47ccyfk14qdsq57w807c"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; + HTqPCR = derive2 { name="HTqPCR"; version="1.40.0"; sha256="008iczqaa0wn5nw144vfg3qylg7qa1q963nq9mqhgj3sxlg4rmjx"; depends=[affy Biobase gplots limma RColorBrewer]; }; + Harman = derive2 { name="Harman"; version="1.14.0"; sha256="1bw08fal6v1pjwc5pqjjmwr6msml6w2ywsqvn1rj806v5dkj3h5s"; depends=[Rcpp]; }; + Harshlight = derive2 { name="Harshlight"; version="1.58.0"; sha256="1n7h4s7qawjw4awl8vidc1ynh08v1dkv0igpz1fz8jm2iwhxdxda"; depends=[affy altcdfenvs Biobase]; }; + Heatplus = derive2 { name="Heatplus"; version="2.32.1"; sha256="1ldxj2hasg6ysh70sc73mz2v4h3n8gf3lii09c3sqc4wmz5h7rp1"; depends=[RColorBrewer]; }; + HelloRanges = derive2 { name="HelloRanges"; version="1.12.0"; sha256="19s9jkjrca14wvska7zaf2i598lyifr3w9nfgfcnphxwz5f5hj9r"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + HiCBricks = derive2 { name="HiCBricks"; version="1.4.0"; sha256="0aspirx1jl914nyxw9vwhd7v3n8yavsbv91nwb69hrg4k76iq3hp"; depends=[BiocParallel curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges jsonlite R_utils R6 RColorBrewer readr reshape2 rhdf5 S4Vectors scales stringr tibble viridis]; }; + HiCcompare = derive2 { name="HiCcompare"; version="1.8.0"; sha256="0lkzbxipcj2l3gybiqvpby3hvbqjb2mdpi7yi0k0adyf1cpablch"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq rhdf5 S4Vectors]; }; + HiLDA = derive2 { name="HiLDA"; version="1.0.0"; sha256="0c53ppqh1067kb7ma4hvz17fph3hba9ss5bf1fypmxhkjin3z7cb"; depends=[abind BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot forcats GenomicFeatures GenomicRanges ggplot2 R2jags Rcpp S4Vectors stringr tidyr TxDb_Hsapiens_UCSC_hg19_knownGene XVector]; }; + HiTC = derive2 { name="HiTC"; version="1.30.0"; sha256="0byahi0fz0dzjyklz8v9whax9ygg7gwb4pl1j3zbl6z8a9qx8pps"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; + HilbertCurve = derive2 { name="HilbertCurve"; version="1.16.0"; sha256="0i19lgqlp67554anfmvb15739y6vwdcmf79aj323y3rmwiis20cq"; depends=[circlize GenomicRanges HilbertVis IRanges png polylabelr]; }; + HilbertVis = derive2 { name="HilbertVis"; version="1.44.0"; sha256="0rh666h3542a2ly1nbfx4jqlq8ngp7vnazv472y80nfyj5fmaqar"; depends=[lattice]; }; + HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.44.0"; sha256="1lmf4chpf6di9dqbyqjqyb5f8dmhydb7kzxf58wly02hsm01rqin"; depends=[HilbertVis]; }; + HumanTranscriptomeCompendium = derive2 { name="HumanTranscriptomeCompendium"; version="1.2.0"; sha256="1fczd6qq2fvr202i3dadq43azljxxr7dgnhc8drd9cxi6krr7wjp"; depends=[S4Vectors shiny ssrch SummarizedExperiment]; }; + HybridMTest = derive2 { name="HybridMTest"; version="1.30.0"; sha256="069kvinqmrbdm2igj1a7gr30z9d7i9mx4d52d4fm3lvaf9i28r1l"; depends=[Biobase fdrtool MASS survival]; }; + IHW = derive2 { name="IHW"; version="1.14.0"; sha256="0rnw7r9pylpj3a5graavcpiqv2v67rv2a4dlcynkf4ihpxs4bg8x"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; + IMAS = derive2 { name="IMAS"; version="1.10.0"; sha256="05z0ib5p9f690mr2dhsywbkyf2sh5wjkf2f04z036y41d35gxpwm"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; + IMMAN = derive2 { name="IMMAN"; version="1.6.0"; sha256="1xrp67a9v6k13x86zf4lhx6gwnvf8cm9bw64ihkjsnliwi12ic66"; depends=[Biostrings igraph seqinr STRINGdb]; }; + IMPCdata = derive2 { name="IMPCdata"; version="1.22.0"; sha256="0lvi2rfwp6d67mj5y20plkdwf0xigqh8pkadjprqrsi9972vgc1y"; depends=[rjson]; }; + INDEED = derive2 { name="INDEED"; version="2.0.0"; sha256="0a84785jg223mfyhcghby5ayi7k4smn952imzk084jgjrzn7dm4r"; depends=[devtools glasso igraph visNetwork]; }; + INPower = derive2 { name="INPower"; version="1.22.0"; sha256="1ffprh2x5yg8zlx8w0xsr8ip2yj0x8d9rkjg7ki4k485cxd41y2q"; depends=[mvtnorm]; }; + INSPEcT = derive2 { name="INSPEcT"; version="1.16.3"; sha256="0y4gpvrbmcipdnyz9lz9ywn0317xnpcriiisqvxygin05vgcpilp"; depends=[Biobase BiocGenerics BiocParallel DESeq2 deSolve gdata GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges KernSmooth plgem pROC rootSolve Rsamtools S4Vectors shiny SummarizedExperiment TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + IONiseR = derive2 { name="IONiseR"; version="2.10.0"; sha256="1c265bzh923i9mw83mjpj0bzbkixbs6sg1h1z51y9xjkakdgg90f"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; }; + IPO = derive2 { name="IPO"; version="1.12.0"; sha256="11fk095mcd0gm3yjli97x5srza9x7syi9rbv8b1cmwdyapmzjrjj"; depends=[BiocParallel CAMERA rsm xcms]; }; + IPPD = derive2 { name="IPPD"; version="1.34.0"; sha256="1xghzsxdh9ms552av1sxg2c7hv32p8xil7yyw29m8bblircag82s"; depends=[bitops digest MASS Matrix XML]; }; + IRanges = derive2 { name="IRanges"; version="2.20.2"; sha256="1jhnxb9yacmj2z82b6992gihjvj1a0gnjwbjiagyyx03fqnv23kg"; depends=[BiocGenerics S4Vectors]; }; + ISoLDE = derive2 { name="ISoLDE"; version="1.14.0"; sha256="177cbz3wqs7jsc2gcj3ncajnp8cvd9krk0d31r0wp8mcx6kqbx1x"; depends=[]; }; + ITALICS = derive2 { name="ITALICS"; version="2.46.0"; sha256="1qib7ka8ynz6chr36vjy5lbwklb5v28a92ibawwgwrb2wxrqkmg4"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; + IVAS = derive2 { name="IVAS"; version="2.6.0"; sha256="02fpqjbsb6d1fzvsrcfwkwwnb1fg78nfqsb2wgiakd6i7rc3sihf"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; }; + IWTomics = derive2 { name="IWTomics"; version="1.10.0"; sha256="10rsjjrkmf6czbpa7w69smf0nmml36c5dczzlvlmhx71ya1dhj89"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; + Icens = derive2 { name="Icens"; version="1.58.0"; sha256="0jfz8w0xk4a4q6h2fwd862z48saky3cp387hvdy883b92w1kw9wi"; depends=[survival]; }; + IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.30.0"; sha256="1pp834kwfv3vgxm4ph7xzzr8hpc3hs80l6bjda6vmmmv4w2avvmc"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; }; + IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.34.0"; sha256="0d32a5a4m74bqj78gjifnab2j3dxxy4yhix8idzw5hjz22qngwgl"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; }; + IdeoViz = derive2 { name="IdeoViz"; version="1.22.0"; sha256="0rsz6dawrx5qdrypxs2hgihmx3kbpdg1y73h876yxccgdlabvzil"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; + IgGeneUsage = derive2 { name="IgGeneUsage"; version="1.0.0"; sha256="11kdh6a9zs2qqyz7x7w2kd9fdpaa889dnr69wyvhnpbjb16gjvkd"; depends=[Rcpp reshape2 rstan StanHeaders SummarizedExperiment]; }; + Imetagene = derive2 { name="Imetagene"; version="1.16.0"; sha256="1nig0cn8rwh47d2yrlv9k2zz38qmaly4jwrbpjahjlyxgm3j5hq6"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; + ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.14.1"; sha256="0lzhx3c62rx4grgpqy5z0jxalj2rinkqksq72aflxaivvx72pb04"; depends=[Biobase curl data_table digest flowCore flowWorkspace ggplot2 gplots heatmaply httr jsonlite pheatmap plotly preprocessCore R6 Rlabkey rmarkdown scales]; }; + ImpulseDE = derive2 { name="ImpulseDE"; version="1.12.0"; sha256="05zbx99bmfvfpig5srrz9v4nx4aii8vcc1rywm9wjc6lkg4lfzpw"; depends=[amap boot]; }; + ImpulseDE2 = derive2 { name="ImpulseDE2"; version="1.10.0"; sha256="1j6aajiccmm77zmdfcsni9qahdyccg6sj6f8vnfhigy5fy4vyxdd"; depends=[Biobase BiocParallel circlize ComplexHeatmap cowplot DESeq2 ggplot2 knitr Matrix S4Vectors SummarizedExperiment]; }; + InPAS = derive2 { name="InPAS"; version="1.18.0"; sha256="148mgbywhbddvb704malij4zspr24f1rjbk2rxpq2v2s7058lmd5"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; + InTAD = derive2 { name="InTAD"; version="1.6.0"; sha256="040jqdwbyf3mz4nkaqcnc72zmyj3vs6k404ld6ljink0gzysldi1"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; }; + IntEREst = derive2 { name="IntEREst"; version="1.10.2"; sha256="1j3zmqqpgfp4j463l5imggqzhrl7484cfyk7irlm16iwxxrlwz5h"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; + InterMineR = derive2 { name="InterMineR"; version="1.8.1"; sha256="1ryja9f1ds10f5lrc00lkad7lnixg2dy1imrh0d21j1wq1lfy1j6"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; + InteractionSet = derive2 { name="InteractionSet"; version="1.14.0"; sha256="0n2l95h56x5g68p10cap8p4x3a6vaph2hjlk09vmi3j48lrzb2kh"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; + IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.8.0"; sha256="1lq8v8zbjigm5k9r1l6d87wm83asnq4wm3s1bwprdfaqlk6cq6wx"; depends=[FGNet igraph knitr]; }; + IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="1.4.1"; sha256="1lyagc0v0c1n7b8fqn9lagzb61b9gsjs219a487xlsqcqgyhssnk"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; }; + IsoCorrectoRGUI = derive2 { name="IsoCorrectoRGUI"; version="1.2.0"; sha256="1h1h5s83f8hs01wzh0fqvwvr1i300w1q9ncqvys9vlx7bz8l3b9p"; depends=[IsoCorrectoR readxl tcltk2]; }; + IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.22.0"; sha256="1hckxl6g26z94nqvxxrxnirgczqd9lhm9smkqmag7mwjvvsyg63b"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; + IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.8.0"; sha256="0dsss8qvy7hf75krcd7vgpvfzz3jbzfkl8z5lznsxl760kmwa5b5"; depends=[Biostrings BSgenome DBI DEXSeq dplyr DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr plyr RColorBrewer readr reshape2 rtracklayer stringr tximport VennDiagram XVector]; }; + JunctionSeq = derive2 { name="JunctionSeq"; version="1.16.0"; sha256="0nsyql5bq4g5995kya71bh0v29v1lgbi3l0lyscbm6mcax4hajs4"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix Rcpp RcppArmadillo S4Vectors statmod stringr SummarizedExperiment]; }; + KCsmart = derive2 { name="KCsmart"; version="2.44.0"; sha256="0k8xkbxy7nxnn07wbsdzfad4vdjbgx72qlml8cf7vb2223hd9qr7"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; + KEGGREST = derive2 { name="KEGGREST"; version="1.26.1"; sha256="1cgjvv9n88y3ah21356mh8z2l08vjn42hjy8hcljsibknzc4v247"; depends=[Biostrings httr png]; }; + KEGGgraph = derive2 { name="KEGGgraph"; version="1.46.0"; sha256="18jvy5lh5r2ikjsvzgv35wxqgbqpq0z5yphv863danlcmdb36gdr"; depends=[graph RCurl XML]; }; + KEGGlincs = derive2 { name="KEGGlincs"; version="1.12.0"; sha256="0ybgm4zcsqsx7paljcbw93qj7arcb9ndzr4rcvaimgjlh60nbngq"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; }; + KEGGprofile = derive2 { name="KEGGprofile"; version="1.28.0"; sha256="1ci4mdcm3pk7v7bhslqwkydwc935mkx296q7a9sz3nwyndr1z2vi"; depends=[AnnotationDbi biomaRt ggplot2 KEGG_db KEGGREST png RCurl reshape2 TeachingDemos XML]; }; + KinSwingR = derive2 { name="KinSwingR"; version="1.4.0"; sha256="1ak2yqrdzkam069361chj7v2bxzhb9ry7m0cfp95jlfhlmr2j34z"; depends=[BiocParallel data_table sqldf]; }; + KnowSeq = derive2 { name="KnowSeq"; version="1.0.0"; sha256="0ms5d5cf4va13jzg42zjy99i6i6lni418b87ja3264lmxl9r2lnc"; depends=[arrayQualityMetrics Biobase biomaRt caret class cqn e1071 edgeR factoextra ggplot2 gplots httr jsonlite kernlab limma mclust multtest pathview praznik quantreg R_utils randomForest RCurl reshape2 rhdf5 stringr sva topGO tximport tximportData XML]; }; + LBE = derive2 { name="LBE"; version="1.54.0"; sha256="0dx43mig5y3dcr2fpvi86rigbh1nxk9a6b2p36fgzfnq6l3dbcha"; depends=[]; }; + LEA = derive2 { name="LEA"; version="2.8.0"; sha256="16fc2b58nggdwvpipzaa2w80g08ka4iahsyjn8ahhmxmxfand0w9"; depends=[]; }; + LINC = derive2 { name="LINC"; version="1.14.0"; sha256="07ffywm538h8m8gyhm25vcmw3xkrxzqhxzsggb9x6ica2zij8k3k"; depends=[ape Biobase clusterProfiler DOSE ggplot2 ggtree gridExtra org_Hs_eg_db png Rcpp ReactomePA reshape2 sva]; }; + LMGene = derive2 { name="LMGene"; version="2.42.0"; sha256="133mzbppywsqkyxkfadcyglg8s3ilkcqhkc7gih2jjiwcxx106dh"; depends=[affy Biobase multtest survival]; }; + LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.12.0"; sha256="1m4y5d1vm8954k16d64kv0v0nz99lgay5fg220x4vj506s91jgy6"; depends=[CAMERA xcms]; }; + LOLA = derive2 { name="LOLA"; version="1.16.0"; sha256="1py2373fkk9mksxl8d48ifczbgpg33ky2npid45wwdkw3mf9zq3a"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; + LPE = derive2 { name="LPE"; version="1.60.0"; sha256="0m26b72nqgac6fzxsxwl8r64qzang06crv5nzr1dmiyvv85d6q8j"; depends=[]; }; + LPEadj = derive2 { name="LPEadj"; version="1.46.0"; sha256="1rpp0g0xafakilgkwfkr9w6zm2hlyx2bnmwrxnidrqvs1z7zc8qr"; depends=[LPE]; }; + LRBaseDbi = derive2 { name="LRBaseDbi"; version="1.4.0"; sha256="1hjl0lpsy7zlncvlr8q09jwpaw9iszndx12ag6ii3wcjlhdlbd9s"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; + LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.36.0"; sha256="0rilrapn432cxybb6jssan6dbn7qfb8b5c5fvn6chm4kmn2hjhdl"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; }; + LedPred = derive2 { name="LedPred"; version="1.20.0"; sha256="1f53v8aw0ys178kvbsa0cd3kys4271m93dxyk73c2345mv87f8bl"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; + LineagePulse = derive2 { name="LineagePulse"; version="1.6.0"; sha256="0m88bkys9vpq7k4qypm70mw5jfb0qvigbm5k9i6ca62xlx3rjxsv"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; }; + LinkHD = derive2 { name="LinkHD"; version="1.0.0"; sha256="0yym2pxpzarpnfi5gmg99cxdkhq5gg5h6wqzqnvyd1rbgr63rh83"; depends=[cluster data_table emmeans ggplot2 ggpubr gridExtra MultiAssayExperiment reshape2 rio scales vegan]; }; + Linnorm = derive2 { name="Linnorm"; version="2.10.0"; sha256="15mhwiqmp9m65zvrdbr2hhy3x81lf4jbwgjsf75g41if2v2g8x67"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; }; + LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.40.0"; sha256="13spdphpf3ffk20ds4yrq50wrpiwz9bn2wp9lhrsvx5a5l8cpxag"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; + Logolas = derive2 { name="Logolas"; version="1.10.0"; sha256="0pmpvncbh60xg07a945axv3fnff5djlvvxbx69723hbxp14vkyxh"; depends=[Biostrings ggplot2 gridBase LaplacesDemon SQUAREM]; }; + LoomExperiment = derive2 { name="LoomExperiment"; version="1.4.0"; sha256="0m9y5i9dwm53vwwyxqbmhrp7rga8fhsl2b39g4almmmwg0m4xdp7"; depends=[DelayedArray GenomicRanges HDF5Array Matrix rhdf5 rtracklayer S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; + LowMACA = derive2 { name="LowMACA"; version="1.16.0"; sha256="0qp6x72yfiqz20frzww33rg34da5x7q4n6b9mvpz5nrmd10cknh4"; depends=[BiocParallel Biostrings cgdsr data_table gridBase httr LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; + LymphoSeq = derive2 { name="LymphoSeq"; version="1.14.0"; sha256="02v9si759hr54vp8dwh529qx5slx0q7gn2sidc7slp91fpma1bfz"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; + M3C = derive2 { name="M3C"; version="1.8.0"; sha256="10lpqv4z58s5dlinlhv51mjg3rc0sdv8jpiy6y0vxs2h15j4xgp8"; depends=[cluster corpcor dendextend doParallel doSNOW foreach ggplot2 Matrix matrixcalc NMF RColorBrewer Rtsne sigclust survival umap]; }; + M3D = derive2 { name="M3D"; version="1.20.0"; sha256="0q4aq98cwp6b8mzkjk4iwvllw1d67hm7zvqaf4rb7vb5dpx7yjaj"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; }; + M3Drop = derive2 { name="M3Drop"; version="1.12.0"; sha256="1r49r82gbk7gp0gkp0xh6zk1agh88qj8hkjsrr8jwm8rmihc47r5"; depends=[bbmle gplots Hmisc irlba Matrix matrixStats numDeriv RColorBrewer reldist statmod]; }; + MACPET = derive2 { name="MACPET"; version="1.6.0"; sha256="0zzv6l2arij6xwldwxa209jcyyf1ygwp5a4r1y3h5b3zn76hjs9c"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; + MACSQuantifyR = derive2 { name="MACSQuantifyR"; version="1.0.0"; sha256="07czlj54n16fpppqnx8sq2bc68207lvm4lman5k1dm9y2dniyy5l"; depends=[ggplot2 ggrepel gridExtra lattice latticeExtra png prettydoc readxl rmarkdown rvest xml2]; }; + MADSEQ = derive2 { name="MADSEQ"; version="1.12.0"; sha256="0zj3h29l2ay5dhg63hfgjjfbs6v4s9rwz4zar5jgf94ml5kxcky7"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; + MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.6.3"; sha256="1rwwd1a001cxylpsknwsjkkbqq31w88bkd4qhgizlfi65i32c7my"; depends=[Biobase biomaRt clusterProfiler data_table dendextend DOSE enrichplot ggplot2 ggpubr ggrepel ggsci GO_db gridExtra pathview pheatmap png scales sva]; }; + MAIT = derive2 { name="MAIT"; version="1.20.0"; sha256="1iybkaf18xd3598vyz6gjknfrxf4x8h0l6k2gixy8pgdlbcyfv40"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; + MANOR = derive2 { name="MANOR"; version="1.58.0"; sha256="1iyrvdzdcn1530grsfjvckzplnw65vf3z0x27nj2gdqf6akflws0"; depends=[GLAD]; }; + MAST = derive2 { name="MAST"; version="1.12.0"; sha256="1l78rrwkzyswpj6pgc9z8290fqrk4akba76invkkazpyh91r8gga"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr progress reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; + MBASED = derive2 { name="MBASED"; version="1.20.0"; sha256="1w9pc93m5z9smwcxl9pxyjr37y6h94jnb5wx2xmxjika1q9czj0a"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; + MBAmethyl = derive2 { name="MBAmethyl"; version="1.20.0"; sha256="0dmiahz6m2y429dzsnv0a7bvb9ngllqgmws457in3crq85qq2swp"; depends=[]; }; + MBCB = derive2 { name="MBCB"; version="1.40.0"; sha256="1q7sg5anvdfhd0ya93ifbgnmpgapysn9dbfh40pvv2vymqv39vzg"; depends=[preprocessCore tcltk2]; }; + MBttest = derive2 { name="MBttest"; version="1.14.0"; sha256="1nfmnc0hwmggi1m10zykhxvdlzmy7fy0lqp9z3snkcmp1n2m6ar2"; depends=[gplots gtools]; }; + MCRestimate = derive2 { name="MCRestimate"; version="2.42.0"; sha256="1d4ahbzq3qpjldyh0w7siqwmghmylak8jjlhrc619y5vd47nijfh"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; }; + MCbiclust = derive2 { name="MCbiclust"; version="1.10.0"; sha256="1kyq4ccx1dzl0nld23ippis2x1ds1sj23h2y25h1m04jcw40bsyd"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; + MDTS = derive2 { name="MDTS"; version="1.6.0"; sha256="1zzvk5ql4k29aizv52i29zxcpvyzacb4jy1vh11dd4qwrqazvdyv"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; }; + MEAL = derive2 { name="MEAL"; version="1.16.0"; sha256="1892wd53h3jh0m11frlv95fn8xxdbwr2wnklgmnfdyd9xyfsmrwr"; depends=[Biobase BiocGenerics DMRcate GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; }; + MEB = derive2 { name="MEB"; version="1.0.0"; sha256="0x0pbgnbr48g40rf5rv1c8yws1knmfmfyzjh3vh7kb7a1hjdqjc9"; depends=[e1071 SummarizedExperiment]; }; + MEDIPS = derive2 { name="MEDIPS"; version="1.38.0"; sha256="152sakww2q0dpyarh8x3nkgyv7a291cyz758qajv70d6b6izqndy"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; + MEDME = derive2 { name="MEDME"; version="1.46.0"; sha256="19daafnhkivwgn4yv1k8cnsgn94fny22mi7n4q3q9i0qrpf2k4qq"; depends=[Biostrings drc MASS]; }; + MEIGOR = derive2 { name="MEIGOR"; version="1.20.0"; sha256="0mwcyln9sqfg7ldl7brgn62qj9dd2l5068wrm39lrnrvaivziv0r"; depends=[CNORode deSolve Rsolnp snowfall]; }; + MGFM = derive2 { name="MGFM"; version="1.20.0"; sha256="0jlyv58nzniya12axm4fm9g66dhxznh2274k6bma57whr2in6sv5"; depends=[annotate AnnotationDbi]; }; + MGFR = derive2 { name="MGFR"; version="1.12.0"; sha256="16zxwxcvg0sgwvabv125z4w6b2pwlngz5dh35cymgp511acwbvf4"; depends=[annotate biomaRt]; }; + MIGSA = derive2 { name="MIGSA"; version="1.10.1"; sha256="07y9cldgywngabnsmgn4k22rpksy8i6a1d3iw3ma21zycvknnah2"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz RJSONIO vegan]; }; + MIMOSA = derive2 { name="MIMOSA"; version="1.24.0"; sha256="1xd65i046y3r3la0fv0ynvflq7n1rd5y03f53q0789m54hkm1fly"; depends=[Biobase coda data_table Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; + MIRA = derive2 { name="MIRA"; version="1.8.0"; sha256="1r08x4d96sf8zj2xyfx9lrh5lrixmq0w1yaj78jp6mvlfzbxrm0h"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; + MLInterfaces = derive2 { name="MLInterfaces"; version="1.66.5"; sha256="05bg7qcrv485m03rkyq3qg5hrr1m3y7zx49bipwaivzqm3s1mbw5"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rpart sfsmisc shiny threejs]; }; + MLP = derive2 { name="MLP"; version="1.34.0"; sha256="1plnp99bgjrk7691w4x8xzw7bxkv1d36xzign6ikz6c28c1gjghm"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; + MLSeq = derive2 { name="MLSeq"; version="2.4.0"; sha256="0cxmz06c1f62z70pcc5zsf3yhig2z0sw0ss8djsh33n868z40z7c"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma plyr sSeq SummarizedExperiment xtable]; }; + MMAPPR2 = derive2 { name="MMAPPR2"; version="1.0.0"; sha256="0504pmknk6rh8r1b531m19ki8wknbgy0fihgc861dfy4p85bnn2d"; depends=[Biobase BiocGenerics BiocParallel data_table dplyr ensemblVEP GenomeInfoDb GenomicRanges gmapR IRanges magrittr Rsamtools S4Vectors stringr tidyr VariantAnnotation VariantTools]; }; + MMDiff2 = derive2 { name="MMDiff2"; version="1.14.0"; sha256="0586p4z30f6z58l4zk295wn4qwjl5qg9jr8vs1dzrbkwc5hppf0m"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; + MMUPHin = derive2 { name="MMUPHin"; version="1.0.0"; sha256="15ysglr1prf298qlm0yj5k5j68zd71iifqmg6n9qyn97mzl3b01b"; depends=[cowplot dplyr fpc ggplot2 igraph Maaslin2 metafor tidyr]; }; + MODA = derive2 { name="MODA"; version="1.12.0"; sha256="07ayd43avgibr3nbrphkmsdammmdmayk6krs9l70qzljnbgj97g2"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; }; + MOFA = derive2 { name="MOFA"; version="1.2.0"; sha256="04vrp406skx1kw4c1b40fnq24b3iafphhrgyvxq9g35hij85amh2"; depends=[Biobase corrplot cowplot doParallel dplyr foreach GGally ggbeeswarm ggplot2 ggrepel MultiAssayExperiment pheatmap RColorBrewer reshape2 reticulate rhdf5 scales]; }; + MOSim = derive2 { name="MOSim"; version="1.0.0"; sha256="10808r1k915hwlascw3hpm98zgr7pyak2kzm0hy1s3sl1i2v0iwj"; depends=[Biobase dplyr ggplot2 HiddenMarkov IRanges lazyeval matrixStats purrr rlang S4Vectors scales stringi stringr tibble tidyr zoo]; }; + MPFE = derive2 { name="MPFE"; version="1.22.0"; sha256="1pyifclijm3lf50580hw3ykpns3344zfg2bsva42dvyaca1yb7mf"; depends=[]; }; + MPRAnalyze = derive2 { name="MPRAnalyze"; version="1.4.0"; sha256="08wh7h27a50y96jg9z90f7fkq56hmdx2s64z1blqygjndx5kv76h"; depends=[BiocParallel progress SummarizedExperiment]; }; + MSGFgui = derive2 { name="MSGFgui"; version="1.20.0"; sha256="18xv8ivgzjbyafhlf9jf57j62lg79h6c1idgc9ncw4nn4nfxczra"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; + MSGFplus = derive2 { name="MSGFplus"; version="1.20.0"; sha256="0vy6aylpkd47s4p5c2xl9gfrx25cgh2dbrq2rqb9cyfl51v4r8jd"; depends=[mzID ProtGenerics]; }; + MSnID = derive2 { name="MSnID"; version="1.20.0"; sha256="0m71f2y12hmwvng45kzz4r4qrgc2jbd7j9gprmw8y5laawpdaifg"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; }; + MSnbase = derive2 { name="MSnbase"; version="2.12.0"; sha256="1z889xkfphqqmv31i8hh5xqyclv660ic26rfck5bjpgk3s2zzwi6"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors scales vsn XML]; }; + MSstats = derive2 { name="MSstats"; version="3.18.5"; sha256="0c3sfk3nlvmr35xz6r7db4dyqwvb44agqkgh8gllymwxp1q73zaj"; depends=[broom data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm preprocessCore purrr reshape2 snow statmod stringr survival tidyr]; }; + MSstatsQC = derive2 { name="MSstatsQC"; version="2.4.0"; sha256="0ns4pcjf1zjbr2c1db8p1h1dxaq3khwxcvqbbliaasbfahskiy00"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics]; }; + MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.6.0"; sha256="16qg0jffahqxhh2g7hm3ykmpfbmwvrnmsr2qx73xd6gpg5lghh24"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly shiny]; }; + MSstatsSampleSize = derive2 { name="MSstatsSampleSize"; version="1.0.1"; sha256="0knmm2950jm873qdh7fvqfh7zv2qmb6f6s88jjan2iv9vlxf744j"; depends=[BiocParallel caret ggplot2 gridExtra MSstats reshape2]; }; + MSstatsTMT = derive2 { name="MSstatsTMT"; version="1.4.5"; sha256="1ji0k0b3h94jar3h81qrd7zfgh5cfjii9vzr3rrfj1z8rzci1f2s"; depends=[data_table dplyr ggplot2 limma lme4 matrixStats MSstats nlme reshape2 statmod tidyr]; }; + MTseeker = derive2 { name="MTseeker"; version="1.3.0"; sha256="182w8w8f6v9vfx5562pr7ypp1fwgm6n6q18j8l1nmsj6352y4p7a"; depends=[Biobase BiocGenerics Biostrings circlize GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR Homo_sapiens IRanges jsonlite Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VariantTools viridis xml2]; }; + MVCClass = derive2 { name="MVCClass"; version="1.60.0"; sha256="188p6w92p2rky62rv4473xf66srvrxnzk6hz4ywqbn4wq0fzkl2x"; depends=[]; }; + MWASTools = derive2 { name="MWASTools"; version="1.10.0"; sha256="0hd5mfnbngcc2vj2wcz8grfa1nr7hgampp4wcbpjmchk66vb0cfg"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; + Maaslin2 = derive2 { name="Maaslin2"; version="1.0.0"; sha256="123ll5lhqdd3vc0cydrsv9xh35qdkia6msj78pplcawlrd4nqg3z"; depends=[biglm car chemometrics cplm data_table dplyr edgeR ggplot2 hash lmerTest logging lpsymphony MASS metagenomeSeq MuMIn optparse pbapply pcaPP pheatmap pscl robustbase vegan]; }; + MantelCorr = derive2 { name="MantelCorr"; version="1.56.0"; sha256="05msf80a5ls59bvwdrjfv5ilyd69kg3v6n4ahbizr07d9ndqwhgj"; depends=[]; }; + MassArray = derive2 { name="MassArray"; version="1.38.0"; sha256="17lcvw4a7zijbii6na2zm66pkx3gwa5znwww473bidqq71hsjvns"; depends=[]; }; + MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.52.0"; sha256="0xnj3ncrwvr2b8msi3g77mgzj0zaksn3lgqdn1abh0ww5wgk83v7"; depends=[waveslim]; }; + MatrixRider = derive2 { name="MatrixRider"; version="1.18.0"; sha256="13h4yx8knmx2qhh56q4lx0ac4skacrkvd9c6226nms8z7xr6gzdj"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; + MaxContrastProjection = derive2 { name="MaxContrastProjection"; version="1.10.0"; sha256="1iwwm07dnbpys76z1rzn0zqs3nid5fg2xvq78rn666ai1xgvp5kl"; depends=[EBImage]; }; + MeSHDbi = derive2 { name="MeSHDbi"; version="1.22.0"; sha256="17nbj474w1hp8dp1l23nms97w8g0wr3jbyl35r8bqwkzrh3wzk9v"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; + MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.58.0"; sha256="0lmkfcr410cjv8yfsm7fnigrzf5i3qxixxrlcv51vqgj7lnxyz3h"; depends=[]; }; + Melissa = derive2 { name="Melissa"; version="1.2.0"; sha256="0cym2wj7m6rnmr9ddw4n9zrsjkkmnw7rch9mdk9xkk5dznzrvchq"; depends=[assertthat BiocStyle BPRMeth clues cowplot data_table doParallel foreach GenomicRanges ggplot2 magrittr matrixcalc MCMCpack mvtnorm ROCR truncnorm]; }; + MergeMaid = derive2 { name="MergeMaid"; version="2.58.0"; sha256="1ykkmsp9m6zs6bgw1sicv50918y7mvjk04rbnbbjrzy0p7rc8m5z"; depends=[Biobase MASS survival]; }; + Mergeomics = derive2 { name="Mergeomics"; version="1.14.0"; sha256="1c2fl8jmmh4qhh6bqqkbzdgzq5ipsscjp0akd3xgvb69nwhraj4w"; depends=[]; }; + MetCirc = derive2 { name="MetCirc"; version="1.16.0"; sha256="0wrf31xxj76alm2xdqmxsdl9ah7p38ysfwra7zhmlvc2xjzvknhy"; depends=[amap circlize ggplot2 MSnbase S4Vectors scales shiny]; }; + MetID = derive2 { name="MetID"; version="1.4.0"; sha256="02f586g5jpr0pbidc61fr6vph6g6i65vzw95lpsh1vsbdcs06x4b"; depends=[ChemmineR devtools igraph Matrix stringr]; }; + MetNet = derive2 { name="MetNet"; version="1.4.2"; sha256="1rdmqlib1mg5sqqmb4f0sqmv4ifkrin14g0pwbsi0qz6gb90g14n"; depends=[BiocParallel bnlearn GENIE3 mpmi parmigene ppcor sna stabs]; }; + MetaCyto = derive2 { name="MetaCyto"; version="1.8.0"; sha256="0kb4dysq0glalq3mvk7ckagdxxx6sd7a6vyjcf5v842dxymwkxan"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; + MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.6.0"; sha256="11nkn6lwjbsqhn8yfjxnrnc6hpqrmaby3gr3c9anmgg12aiqfc5w"; depends=[beanplot GenomicRanges gplots Matrix matrixStats RColorBrewer Rcpp SummarizedExperiment]; }; + MetaVolcanoR = derive2 { name="MetaVolcanoR"; version="1.0.1"; sha256="0iq8d0shwrz9wjldqlz4kkcz444i6qd70j2a8c261bgsdsbzqj1v"; depends=[cowplot data_table dplyr ggplot2 htmlwidgets metafor metap plotly rlang tidyr topconfects]; }; + Metab = derive2 { name="Metab"; version="1.20.0"; sha256="00aa531dddz37b234l613r1hzjr04iw2bjrcqhalphxff3hkp1l3"; depends=[pander svDialogs xcms]; }; + MetaboSignal = derive2 { name="MetaboSignal"; version="1.16.0"; sha256="12pq9z8q772kfyj9rvxb8bw2cbicdhh9j7acfssk5bqk3jn1l21s"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; }; + MethCP = derive2 { name="MethCP"; version="1.0.0"; sha256="0hrsipmzfxqp7j99xq8bkld9qz3yk7ngf4lzf9sn0b28j2kl5hdg"; depends=[bsseq DNAcopy DSS GenomeInfoDb GenomicRanges IRanges methylKit S4Vectors]; }; + MethPed = derive2 { name="MethPed"; version="1.14.0"; sha256="1d42a04lrs5sjk1143kpxkg87laaracbkq2favs2zq4f8dj5j023"; depends=[Biobase randomForest]; }; + MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.18.0"; sha256="1h0cgs3j5rwp91m6qbqch2hqwwnyz4przz44gmqr9pridm5jpn8s"; depends=[Biostrings gplots seqinr stringr]; }; + MethylAid = derive2 { name="MethylAid"; version="1.20.0"; sha256="1inz2dvdx8w3bzif46dp14plqr692idc38syx2wbblmv9v3x0fws"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; }; + MethylMix = derive2 { name="MethylMix"; version="2.16.0"; sha256="04chgiwzc7s18i329wv1zq0nr2hlvdlwfbx1qpr4y0ks6xaa6wvp"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; + MethylSeekR = derive2 { name="MethylSeekR"; version="1.26.0"; sha256="1dgv2hynd4h54srxpxflczfixhb9rsax81bawrswxycw2wv077g3"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; + Mfuzz = derive2 { name="Mfuzz"; version="2.46.0"; sha256="0dh0lznx4cpaw6isx0n4fi01z1gdljv64q8k5aqd2fcpzvpfwhbg"; depends=[Biobase e1071 tkWidgets]; }; + MiChip = derive2 { name="MiChip"; version="1.40.0"; sha256="1kwwb45h17cgg9mynl9mhnhn1qyaxwxc1x8bbc9vywi4nxjbvymy"; depends=[Biobase]; }; + MiPP = derive2 { name="MiPP"; version="1.58.0"; sha256="0iylhrk6s5vwmmxvh4zijb5kixm8vb52m6dp1yj14lgjaaxvyxkb"; depends=[Biobase e1071 MASS]; }; + MiRaGE = derive2 { name="MiRaGE"; version="1.28.0"; sha256="0yf98q7nd0i7xbi2fgy5g3z7dq0b88n4f1i2qga5slqwyyrmly25"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; }; + MineICA = derive2 { name="MineICA"; version="1.26.0"; sha256="0bbpwfllhigfacfjrlibbjhsp6gbmdry27zds6lw5advsji50xnv"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; + MinimumDistance = derive2 { name="MinimumDistance"; version="1.30.0"; sha256="19mrihv5pv5npksr8d6ks96fhlaml9rb6xvsiisrmlwmppriqmmn"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; + Mirsynergy = derive2 { name="Mirsynergy"; version="1.22.0"; sha256="0g1k3i481y62dqjw34nx7g1zqds9dk26avjxsl4mclj9wdgbvidb"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; + MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.36.0"; sha256="184ix333q45zrax529r7cqvl8vv175jn2vlw93ljfni3llkkg9l2"; depends=[Biobase lattice limma statmod vsn xtable]; }; + MoPS = derive2 { name="MoPS"; version="1.20.0"; sha256="1l6qwq0yq462kg2iacxnnjnsp319zyr8gkp60pkw1fhd83sn68j6"; depends=[Biobase]; }; + Modstrings = derive2 { name="Modstrings"; version="1.2.1"; sha256="0ki8pj7g6y5n5zpajwbx6vx3qamx2lsi9xw9amajvcp82svbqk9w"; depends=[assertive BiocGenerics Biostrings GenomicRanges IRanges S4Vectors stringi stringr XVector]; }; + MoonlightR = derive2 { name="MoonlightR"; version="1.12.0"; sha256="06pg5mv068i3pfkw8qid47kmrzsfwphvajg3v07h54yv8qzgi77h"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; + MotIV = derive2 { name="MotIV"; version="1.42.0"; sha256="07k4rw4nhcn4sg43psv1h7qr064gws22m2yyr7x8sy3f1i1c954k"; depends=[BiocGenerics Biostrings GenomicRanges IRanges lattice rGADEM S4Vectors]; }; + MotifDb = derive2 { name="MotifDb"; version="1.28.0"; sha256="0m5apkjlvdq9yhjdyds3hivfnkbm6f059hy2bkjhalrlhd2si2jc"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors splitstackshape]; }; + Mulcom = derive2 { name="Mulcom"; version="1.36.0"; sha256="159mcbz1x8vzvd8vwlqgr69wrgplw28i18acfills6vpxpq0q5pl"; depends=[Biobase fields]; }; + MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.12.5"; sha256="0a7zsq3adg8rph1w2qr75bpmrq53j99rsypmxj9w5mz9q23r2qlr"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; }; + MultiDataSet = derive2 { name="MultiDataSet"; version="1.14.0"; sha256="0iw99ymrv3ls023mpmgyagmb5simgsgadpj0k4bnssfaqnklywlj"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; + MultiMed = derive2 { name="MultiMed"; version="2.8.0"; sha256="1m5apc88zbk31gf0h6m9lf289i6n3r73am0j1y0acc2v2dmlwyg4"; depends=[]; }; + MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.12.0"; sha256="08715l6swrlccviw7932v5hyrd2x4c6049vy9qnxk0lw3sp1zvsf"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; }; + NADfinder = derive2 { name="NADfinder"; version="1.10.0"; sha256="0awya5rxc6d4rf9m3cpplb12dq0blf182zk81sj9v0ba3g9vjdai"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; + NBAMSeq = derive2 { name="NBAMSeq"; version="1.2.1"; sha256="0k4hvwn76184m3ni12cvvnj7zxb41lkks87w5gkxnwb8m0mlr4z2"; depends=[BiocParallel DESeq2 genefilter mgcv S4Vectors SummarizedExperiment]; }; + NBSplice = derive2 { name="NBSplice"; version="1.4.0"; sha256="1384pfry70v3xjmyc1q0c4s88wyr94v2vkvlyicc6avbp61jlxaz"; depends=[BiocParallel car edgeR ggplot2 MASS mppa reshape2]; }; + NCIgraph = derive2 { name="NCIgraph"; version="1.34.0"; sha256="1pxdhj5rrmax7xxj938q02vjlq9c0j64fmplzcxaczx8bhnlvy5q"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; + NOISeq = derive2 { name="NOISeq"; version="2.30.0"; sha256="1a8p66hhnwmay0rjabwq7356wr93yn33nqgr9rr7whpp9nls1hg4"; depends=[Biobase Matrix]; }; + NTW = derive2 { name="NTW"; version="1.36.0"; sha256="1164npd6d597xi9fqr1qichyr8cn4mdazghh20gq2swh3s129d4q"; depends=[mvtnorm]; }; + NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.16.0"; sha256="0naspag7r3a634m2bdn8sihldfm65b37nr52d0gly55z0y28yay9"; depends=[Biobase matrixStats Rcpp]; }; + NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.18.0"; sha256="14ny303gd3lrhr92rksbgnm26fbxj95rp9rjzzihsmikl5cghs85"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; + NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.30.0"; sha256="0ld0w39ky21jvd217kawaqxp5n3m9hhy5b43gn56dr0k9ylnpwrc"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; }; + NeighborNet = derive2 { name="NeighborNet"; version="1.4.0"; sha256="0lc1rd456fkjcdq0h8z050kz408yhzskh8fbpppmd9yfizbsncsw"; depends=[graph]; }; + NetPathMiner = derive2 { name="NetPathMiner"; version="1.22.0"; sha256="17rldj4yk5bs8zbmg8fvg79r1ml82zpqp7rpph6sc2yznsw88716"; depends=[igraph]; }; + NetSAM = derive2 { name="NetSAM"; version="1.26.0"; sha256="0z10glqwyxvrgavab97mm4vrzq9139isghf1bv2mhljia648msml"; depends=[graph igraph seriation]; }; + NormalyzerDE = derive2 { name="NormalyzerDE"; version="1.4.0"; sha256="1898fakk2mymr4x43z09916q20n219vpb5mdm5iq94k2c6ggfrqm"; depends=[ape Biobase car ggforce ggplot2 limma MASS matrixStats preprocessCore raster RcmdrMisc SummarizedExperiment vsn]; }; + NormqPCR = derive2 { name="NormqPCR"; version="1.32.0"; sha256="0j3z4qwr932m0nkzig7kznc3w37nrjii2mjzsa95qxrqyxxmg1km"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; + NuPoP = derive2 { name="NuPoP"; version="1.36.0"; sha256="1zalsqfvlqm4abhlqwckcmh8wcq9zpg3zdllpafw1jqwbj21dldz"; depends=[]; }; + OCplus = derive2 { name="OCplus"; version="1.60.0"; sha256="031fnrym8h1n85yl6p6pwmfsqsm55l65ipam69ffm79c09bmxy0a"; depends=[akima multtest]; }; + OGSA = derive2 { name="OGSA"; version="1.16.0"; sha256="0ilv0lhlvmsbn9hv618mmx8gc0z94gjvjhhzbymapm5r5blwyzkf"; depends=[Biobase gplots limma]; }; + OLIN = derive2 { name="OLIN"; version="1.64.0"; sha256="1i75nyq8anawy77yl6nhghblmwi6qa7hrlaaa12cq6pylc3km2sa"; depends=[limma locfit marray]; }; + OLINgui = derive2 { name="OLINgui"; version="1.60.0"; sha256="08pbmn4l2ixqndnjb6dakz0sjj7zbyjxvaflb5y804rj15hc2skr"; depends=[marray OLIN tkWidgets widgetTools]; }; + OMICsPCA = derive2 { name="OMICsPCA"; version="1.4.0"; sha256="1dczdggzl1d2zmfla81z2972zzjz9kvwmbvvyhy6sg2jn3kfsfvx"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; }; + OPWeight = derive2 { name="OPWeight"; version="1.8.0"; sha256="15lac1wfis13nhbniv0lz0d946lzm32s381szba0n5i4lvj31dqz"; depends=[MASS qvalue tibble]; }; + ORFik = derive2 { name="ORFik"; version="1.6.9"; sha256="1ml7p3k5i31wwnanvj3aai49sbrp5l76jnjn039y8adc3jsj7b68"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table DESeq2 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + OSAT = derive2 { name="OSAT"; version="1.34.0"; sha256="0imn45bm8bn95i1hzd0gwpldw5cjr3ilpmn0w5ylgnr1scp38xlf"; depends=[]; }; + OTUbase = derive2 { name="OTUbase"; version="1.36.0"; sha256="10gnhlaz8izd6l5c2yja1nxg7bcghivw3mwl0hgvrkqqgbpgbi8j"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; + OUTRIDER = derive2 { name="OUTRIDER"; version="1.4.0"; sha256="0j1p8558h36fqjjzhhwdwdimkcaf2v6j9wp7g76b2m1mz8fsy12d"; depends=[BBmisc Biobase BiocGenerics BiocParallel data_table DESeq2 GenomicFeatures GenomicRanges ggplot2 gplots heatmaply IRanges matrixStats pcaMethods pheatmap plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo S4Vectors scales SummarizedExperiment]; }; + OVESEG = derive2 { name="OVESEG"; version="1.2.0"; sha256="1v80fqm9aa59q487rcpsp5r917fp69anff8kgy11ipwfl7m0pzpa"; depends=[BiocParallel fdrtool limma Rcpp SummarizedExperiment]; }; + OmaDB = derive2 { name="OmaDB"; version="2.2.0"; sha256="0b4r88fq2nfn4yix6qhwjk556bfh2qxfyi129p1zz8k4ql38cf58"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; }; + OmicCircos = derive2 { name="OmicCircos"; version="1.24.0"; sha256="0r2p0kr9hf824l2zfk3ampbdbk9d04a7q99cj6bx0hq7bhnh7nvw"; depends=[GenomicRanges]; }; + OmicsLonDA = derive2 { name="OmicsLonDA"; version="1.2.2"; sha256="0zc0r011v4db8svqg986psy2fdlcvckgj61crslm41rgaq0h788j"; depends=[BiocGenerics BiocParallel ggplot2 gss plyr pracma SummarizedExperiment zoo]; }; + OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.18.0"; sha256="1kg5apfvsafc6fczz2b3bn26zmjcar20qfhms0wx3mq6v146ls1x"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; + OmnipathR = derive2 { name="OmnipathR"; version="1.0.0"; sha256="061pm0qmyf0yqxj47w3jbz2qhjh4r1h2ja37kgksfrl8d2vp2wrp"; depends=[dplyr igraph rlang]; }; + Onassis = derive2 { name="Onassis"; version="1.8.2"; sha256="1h44aly83qzfppbzlzhic990rs5sy70426862ylk06rx985vn0az"; depends=[AnnotationDbi clusteval data_table dendextend DT GEOmetadb ggfortify ggplot2 knitr OnassisJavaLibs RCurl rJava RSQLite Rtsne]; }; + OncoScore = derive2 { name="OncoScore"; version="1.14.0"; sha256="0maqr6rm3xq5qywyvh0xdnkmscya6v7xbwpz41c8i1gki2kaakja"; depends=[biomaRt]; }; + OncoSimulR = derive2 { name="OncoSimulR"; version="2.16.0"; sha256="1937jkxnqkrvxqvpxnz1gv6qghcgs47y3d6vq80ph70sdisnz10l"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph nem RColorBrewer Rcpp Rgraphviz smatr]; }; + OrderedList = derive2 { name="OrderedList"; version="1.58.0"; sha256="1lmbx5cdscc1dfdxx5ncn4nwkxxkgh976v52a17pa1pr5hiwlwsx"; depends=[Biobase twilight]; }; + Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.14.0"; sha256="191bxij92z94cpr1g22dqi4394jsigwz9ljlzm4vwrz7zmqs73a2"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges RSQLite S4Vectors]; }; + OrganismDbi = derive2 { name="OrganismDbi"; version="1.28.0"; sha256="1bvfyh733mhka9zd00hrzpalgjs255c2blnxyf60ipzk5jg7yllb"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; + Oscope = derive2 { name="Oscope"; version="1.16.0"; sha256="1r3h695qxhgdlcrdiljcihqrnbrsgwcw3wgr98h3vmmhzgkfsb16"; depends=[BiocParallel cluster EBSeq testthat]; }; + OutlierD = derive2 { name="OutlierD"; version="1.50.0"; sha256="0bw9m2r3jx10hn1ky1a7zpiwcsd46dnn8lryxydi2pwv6d43qh6r"; depends=[Biobase quantreg]; }; + PAA = derive2 { name="PAA"; version="1.20.0"; sha256="0pnqs84sxwmifv19w2mqg6czmdxgw1g1cxd7jbrq331y44lx9z00"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; + PADOG = derive2 { name="PADOG"; version="1.28.0"; sha256="0jh3cp5r2xdkavlfvyg8iyf1y8bgh7804m6yk71znwv5ii92wmma"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; }; + PAIRADISE = derive2 { name="PAIRADISE"; version="1.2.0"; sha256="0c5iw230x1sgq463hph6jlggjfhjx4znrcgj87x40d7dn78yb2w1"; depends=[abind BiocParallel nloptr S4Vectors SummarizedExperiment]; }; + PANR = derive2 { name="PANR"; version="1.32.0"; sha256="0sgi8rs7srnjsjwqf6bvq8civ0yjz96cw9z0ibda4zhzx8iwy0qm"; depends=[igraph MASS pvclust RedeR]; }; + PAPi = derive2 { name="PAPi"; version="1.26.0"; sha256="1g2rv2vvby983pzv8737x6bc73h6cxwmpfiz5p01ylskp41w58vg"; depends=[KEGGREST svDialogs]; }; + PAST = derive2 { name="PAST"; version="1.2.8"; sha256="1d49i9h8yfn5frybzhzjk586yin59i6jwnmybxd3ymwxd06xpj36"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 iterators qvalue rlang rtracklayer S4Vectors]; }; + PCAN = derive2 { name="PCAN"; version="1.14.0"; sha256="0fagvnb8x1lrzvvvv3iip1svphnx2wnc7llaka0mf1axcpkpy7c8"; depends=[BiocParallel]; }; + PCAtools = derive2 { name="PCAtools"; version="1.2.0"; sha256="17i0dy6aan6b38v3dbhqjwyjks3c763mzpwnc2rbc94i2waj1rl5"; depends=[beachmat BH BiocParallel BiocSingular cowplot DelayedArray DelayedMatrixStats dqrng ggplot2 ggrepel lattice Matrix Rcpp reshape2]; }; + PCpheno = derive2 { name="PCpheno"; version="1.48.0"; sha256="1w284pqf0crhy2vrf7p6ivxk76xddycvhgpb5jkcwa71caldimg7"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; + PECA = derive2 { name="PECA"; version="1.22.0"; sha256="1y8r37fqjwn3kf90ykc2yng959mfs81hwdbjgb5pscl0ryq8fd07"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; + PERFect = derive2 { name="PERFect"; version="1.0.0"; sha256="00m5vz936i8x8m2qvq2j67grjq5hml3ambwp1faq4083l5qkh2db"; depends=[fitdistrplus ggplot2 Matrix phyloseq psych sn zoo]; }; + PGA = derive2 { name="PGA"; version="1.16.0"; sha256="1d2yqvzmpvz8w05m4779kpf2sdbwbm4mf3rc0wmqya3b160vdasm"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table dplyr GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap processx RCurl readr Rsamtools RSQLite rTANDEM rtracklayer S4Vectors seqinr stringr VariantAnnotation]; }; + PGSEA = derive2 { name="PGSEA"; version="1.60.0"; sha256="10ii92rnzfxxgwfw438rh4xpd5cnd7ibfvnx1739n15sgrm9hyc7"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; }; + PICS = derive2 { name="PICS"; version="2.30.0"; sha256="1bxa6hsgzp0ik7mb9jv64x2c187brdp1czqdnjj5lz1s2qcvp348"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; + PING = derive2 { name="PING"; version="2.30.0"; sha256="1flq61048l250cqggz1nqjhrlixxxmiw7p0p7qjki2gg1j59grjn"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; + PLPE = derive2 { name="PLPE"; version="1.46.0"; sha256="024haa7qr6ljn1f60n9cqr4byp3plh91qrvyawz3lqwxqha19xav"; depends=[Biobase LPE MASS]; }; + POST = derive2 { name="POST"; version="1.10.0"; sha256="1ga6ffc62ck1ssc0yi7vhhlihspzk4vcckbz80ry6y6aq340mgya"; depends=[Biobase CompQuadForm GSEABase Matrix survival]; }; + PPInfer = derive2 { name="PPInfer"; version="1.12.0"; sha256="0z7d84ch6kc1x6w5r768jg88cbi9qj31bi66204vcgqqnlyjqlnz"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; }; + PREDA = derive2 { name="PREDA"; version="1.32.0"; sha256="0plnzbiab4y1lzrjdx7k7ymanlz6213hf6jspi5z49ppr2mmj4cb"; depends=[annotate Biobase lokern multtest]; }; + PROMISE = derive2 { name="PROMISE"; version="1.38.0"; sha256="00wbmf1f7h3409lrdr7c2rs3hfwhm3mdm94x7y8ij8a9rq0scb40"; depends=[Biobase GSEABase]; }; + PROPER = derive2 { name="PROPER"; version="1.18.0"; sha256="08cnnm8nznlk01r0jwcvkpi2qd5b2jfdcl031jvkx4w5dmhpli5r"; depends=[edgeR]; }; + PROPS = derive2 { name="PROPS"; version="1.8.0"; sha256="1hh33smsf69lgs1b5pn0yb6ndxz0x4ihxc09a1ygwnhnw4dcjyqm"; depends=[Biobase bnlearn reshape2 sva]; }; + PROcess = derive2 { name="PROcess"; version="1.62.0"; sha256="0ib263xy6j0r6dc5pl85in5zha4h8gzxi579qpc318jy72ca50sv"; depends=[Icens]; }; + PSEA = derive2 { name="PSEA"; version="1.20.0"; sha256="0vq4h3rx94hzarm38402p787x8mxyqfcj2cz909sm78bsy97khv5"; depends=[Biobase MASS]; }; + PSICQUIC = derive2 { name="PSICQUIC"; version="1.24.0"; sha256="0a5nslzbn1wvlcmlg773hlxb1w6q2qamm86frnkrfsfdfblzh4gn"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; + PWMEnrich = derive2 { name="PWMEnrich"; version="4.22.0"; sha256="1a38ma90im0ypy0hqcfmb5n3vqyc5falv9w0rdvqfw9k0j9zkbgv"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; }; + PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.14.0"; sha256="0by4bn740naalaf8sdhd3yaab5y3a92h327g6nksl2djksn297mx"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; + Path2PPI = derive2 { name="Path2PPI"; version="1.16.0"; sha256="1g9z64aqhx7xdc7fg182v4q82r82421z990vs9hvjfgg0x1hdp2j"; depends=[igraph]; }; + PathoStat = derive2 { name="PathoStat"; version="1.12.0"; sha256="01c81m4bl48swz7w2k6xraqj7317n79q8l1rpl23fcxmj98nna88"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; }; + PathwaySplice = derive2 { name="PathwaySplice"; version="1.10.0"; sha256="0qqv24zpfavbj96n9jvrn3yisgba7ia7lvdxyh6v61ff3kj0czlh"; depends=[annotate AnnotationDbi AnnotationHub BiasedUrn Biobase BiocGenerics DOSE dplyr EnrichmentBrowser ensembldb gdata geneLenDataBase GO_db goseq gplots gridExtra htmlwidgets igraph JunctionSeq KEGGREST mgcv org_Hs_eg_db org_Mm_eg_db plotly RColorBrewer reshape2 S4Vectors tibble VennDiagram webshot]; }; + Pbase = derive2 { name="Pbase"; version="0.26.0"; sha256="06n779rjgiy6csdvqa7nrdz5cq0n5w1rwmzrn5xcnzsz2lxv2ws5"; depends=[AnnotationFilter Biobase BiocGenerics BiocParallel biomaRt Biostrings cleaver ensembldb GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; }; + PepsNMR = derive2 { name="PepsNMR"; version="1.4.0"; sha256="0yava5dcabcvsvh1pqxzz0a0kgcx58jlsvvk7i3pcw0p66393vfk"; depends=[ggplot2 gridExtra Matrix matrixStats ptw reshape2]; }; + PharmacoGx = derive2 { name="PharmacoGx"; version="1.17.1"; sha256="0h2458gphawx2l47qdkf8z6ixfbi5fai9hy0dab1gkc0c9697xbc"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer reshape2]; }; + PhenStat = derive2 { name="PhenStat"; version="2.22.0"; sha256="0bhf7hhj6bbdszy3w93qk7i5qfyhrz9bai3qy46i93kwh0bmmzby"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; + PhyloProfile = derive2 { name="PhyloProfile"; version="1.0.7"; sha256="0r50xjfvh357z83nxajmnicyi2ydn78284v9fxfb148rca26v4jn"; depends=[ape BiocStyle bioDist Biostrings colourpicker data_table DT energy ExperimentHub ggplot2 gridExtra OmaDB pbapply plyr RColorBrewer shiny shinyBS shinyjs xml2 zoo]; }; + Pi = derive2 { name="Pi"; version="1.14.0"; sha256="0ff32k8y5mplg38f8mj7npr84yfm5hcm32jbfkivh6vlldbh3c1y"; depends=[caret dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel glmnet Gviz igraph lattice Matrix plot3D randomForest ROCR scales supraHex XGR]; }; + Pigengene = derive2 { name="Pigengene"; version="1.12.0"; sha256="0a0803a6rq8f60ssy5y15gswn6p58ryb2lb3spy1fgpzc2c92s2j"; depends=[bnlearn C50 dplyr gdata GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; + PoTRA = derive2 { name="PoTRA"; version="1.2.0"; sha256="0x7n3ri3w4ib64x8rf94lgndm9nkmzn2lcv96vgq9vjkbdvmyvfi"; depends=[BiocGenerics graph graphite igraph org_Hs_eg_db]; }; + Polyfit = derive2 { name="Polyfit"; version="1.20.0"; sha256="15nk16apcb8afhj9l19w6rmz897gs6i412l6z9l34i53zbkqhq62"; depends=[DESeq]; }; + PowerExplorer = derive2 { name="PowerExplorer"; version="1.6.0"; sha256="0ab09fb8dgr9qp7za9d1qm6rcm2qqhbqfnqg4i5i364pcsdqkv6c"; depends=[Biobase BiocParallel data_table DESeq2 ggplot2 gridExtra MASS ROTS S4Vectors SummarizedExperiment vsn]; }; + PrInCE = derive2 { name="PrInCE"; version="1.2.0"; sha256="1bygqabhbyarwpmy7i26v7n43qy22386haizszw6qk3fmcggd64h"; depends=[Biobase dplyr forecast Hmisc LiblineaR magrittr MSnbase naivebayes progress purrr ranger Rdpack robustbase speedglm tester tidyr]; }; + PrecisionTrialDrawer = derive2 { name="PrecisionTrialDrawer"; version="1.2.1"; sha256="0h71h03wxpykg4sr3zw3ikh18cd41mwjncijwnp9450wln5al6fw"; depends=[BiocParallel biomaRt brglm cgdsr data_table DT GenomicRanges ggplot2 ggrepel googleVis httr IRanges jsonlite LowMACAAnnotation magrittr matrixStats RColorBrewer reshape2 S4Vectors shiny shinyBS stringr XML]; }; + Prize = derive2 { name="Prize"; version="1.16.0"; sha256="0gg950w096ssa3036yrw4q4cm8v4pxh3cx1fya284xiyi87i8i0i"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; + Prostar = derive2 { name="Prostar"; version="1.18.6"; sha256="0na2n52r4i3mibp6ixpzz4a9whq61npvj816l9vg6wrf6zp56xc7"; depends=[BiocManager colourpicker DAPAR DAPARdata data_table DT future highcharter htmlwidgets later promises R_utils rclipboard rhandsontable sass shiny shinyAce shinyBS shinycssloaders shinyjs shinythemes shinyTree shinyWidgets tibble webshot XML]; }; + ProtGenerics = derive2 { name="ProtGenerics"; version="1.18.0"; sha256="1k1ggjgx2la8b21841a4ngkp6xfxwz0czv7x960r7i1jqif8y48z"; depends=[]; }; + ProteoMM = derive2 { name="ProteoMM"; version="1.4.0"; sha256="0xnlsixbgmw9fn227mpi4mh1ia5p1fl4rlsns326p0nnvk7scc1y"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; }; + ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.16.0"; sha256="1qx335i4l99jvqlbwqqdfjin6c8sq0rrrh0nvl3wjsn03f1fxxdh"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; + PureCN = derive2 { name="PureCN"; version="1.16.0"; sha256="0pb0203z3njf3y8ln2j6j5ab5zzwwwzxkwvpqjmnp11yz69vkn12"; depends=[BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; + Pviz = derive2 { name="Pviz"; version="1.20.0"; sha256="01ylwk4qvsj36las4wrqbw5lpcd1lrwd49ipz3v79s96yiazxwiy"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; + QDNAseq = derive2 { name="QDNAseq"; version="1.22.0"; sha256="0xcqdpv9a47zpxx0q9sif5y4s1yzx3pig0kywy961kh5xgl5bcrq"; depends=[Biobase CGHbase CGHcall DNAcopy future future_apply GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; + QSutils = derive2 { name="QSutils"; version="1.4.0"; sha256="01i71zwc5nj6cqa7fq8zjpcgzlq7wf398i9pcczswh3l2wayf3y8"; depends=[ape BiocGenerics Biostrings psych]; }; + QUALIFIER = derive2 { name="QUALIFIER"; version="1.29.1"; sha256="0z5aid77j8bsisc07j8275s0agq6v47vk7bjiwapphw9zgdvnzbd"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; }; + QUBIC = derive2 { name="QUBIC"; version="1.14.0"; sha256="0yicyig3qr0y4784rb9zappvrjwrk9gshz4vlfklrl0paijqhj3n"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; + Qtlizer = derive2 { name="Qtlizer"; version="1.0.0"; sha256="1gqjrv9bqdqhw464bdsgglq3flszh2hwcl4a2cmfahi6w7xwskks"; depends=[curl GenomicRanges httr stringi]; }; + QuartPAC = derive2 { name="QuartPAC"; version="1.18.0"; sha256="1wfcf9sqklg6l3r5jydvyyv282my5vk7ws5ry7hxg9kpzvpbricv"; depends=[data_table GraphPAC iPAC SpacePAC]; }; + QuasR = derive2 { name="QuasR"; version="1.26.0"; sha256="07m5q7wasapj2984kwy897510flbhvz7x0fgs7q2vm5wjhfzdrgv"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rhisat2 Rhtslib Rsamtools rtracklayer S4Vectors ShortRead]; }; + QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.20.0"; sha256="13g58xr6f5qwar5bs141a8x05kv85pnnvlwpgai6730z2aff0gzr"; depends=[dplyr Rcpp yaml]; }; + R3CPET = derive2 { name="R3CPET"; version="1.18.0"; sha256="02hhna99z8ybw538mwd6fn7akzy8sxyms80907q287mb1g26amd9"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; + R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.36.0"; sha256="15z4k3a9kbb0dsq768pc8mwrl0lg3f9giwxdmg1gvcfhf663c13k"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; + R4RNA = derive2 { name="R4RNA"; version="1.14.0"; sha256="1y50i55bmx70nixfvjgbaq4mjzmyl1svfkkczn53gwlchki5761c"; depends=[Biostrings]; }; + RBGL = derive2 { name="RBGL"; version="1.62.1"; sha256="0ixbkdirf08i400db587r262j52sdwdgk3884nxk5xkbhx2m6vg0"; depends=[BH graph]; }; + RBM = derive2 { name="RBM"; version="1.18.0"; sha256="176b2hqmy2njyr0cs8jv846bhv6b9gfkqmj803ic2y2bzlzwrc2b"; depends=[limma marray]; }; + RBioinf = derive2 { name="RBioinf"; version="1.46.0"; sha256="1qys21bw79s74p262lcrbn2fyahfavp3dzdxy37c5441fxi2blwq"; depends=[graph]; }; + RCAS = derive2 { name="RCAS"; version="1.12.0"; sha256="1s3gvvxi1029d1vfwnjh21nnw3mlx08kcwz63891hml9y850cvsn"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DBI DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo knitr motifRG org_Hs_eg_db pbapply pheatmap plotly plotrix proxy rmarkdown RSQLite rtracklayer S4Vectors topGO]; }; + RCASPAR = derive2 { name="RCASPAR"; version="1.32.0"; sha256="1qzwjs8l585dkx6b1vdhlpnqypx6mlfmhvihp0gqfiiv9n053cmy"; depends=[]; }; + RCM = derive2 { name="RCM"; version="1.2.0"; sha256="0h7kwcif953kamaxp6a3z72p726lc8gizwh58933qn34195jv8is"; depends=[alabama edgeR ggplot2 MASS nleqslv phyloseq RColorBrewer reshape2 tensor tseries vegan VGAM]; }; + RCy3 = derive2 { name="RCy3"; version="2.6.3"; sha256="1g05mqs8av6yz826lpldgz0viwm0zq9hzxw11bdv6dq6bbm8vhqb"; depends=[BiocGenerics graph httr igraph R_utils RJSONIO XML]; }; + RCyjs = derive2 { name="RCyjs"; version="2.8.0"; sha256="09hzqf8ppx3fhli28rsnyg22nrsv85vk0k2hw0gw1liz7dd1grwz"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; }; + RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.24.0"; sha256="1yq9d71zd533qjda2gd7hrmwz3gj0cvb0447y2hgp0h83dyswv3s"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; + RDRToolbox = derive2 { name="RDRToolbox"; version="1.36.0"; sha256="0mq6sh5m0i5b7lb315r9v1hci363dwzihpgldvhyk8iv02lsiymg"; depends=[MASS rgl]; }; + REBET = derive2 { name="REBET"; version="1.4.0"; sha256="1536zl0madigiang9lyxi00sb97b0k6zqzg63fh7cp54124c6zri"; depends=[ASSET]; }; + REDseq = derive2 { name="REDseq"; version="1.32.0"; sha256="15qm9031x9bdywdizwfhpfqvnfrh2pysl8rjxgbbp1ljwkrk39zx"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; + REMP = derive2 { name="REMP"; version="1.10.0"; sha256="1isvmnwn08mmivbb4zym6j3v8ig28g96whzsiamwvbzlv02dv55k"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome caret doParallel foreach GenomeInfoDb GenomicRanges impute IRanges iterators kernlab minfi org_Hs_eg_db ranger readr rtracklayer S4Vectors settings SummarizedExperiment]; }; + RGMQL = derive2 { name="RGMQL"; version="1.6.0"; sha256="0da50c4kw87wvajjlbddw3bl3j03i818zdb5g387cif1dkw0gs63"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; }; + RGSEA = derive2 { name="RGSEA"; version="1.20.0"; sha256="05s3irix9i9w8znzgh3hyjq56qz2iwj0bvfxg6a134hy68db8x84"; depends=[BiocGenerics]; }; + RGalaxy = derive2 { name="RGalaxy"; version="1.30.0"; sha256="1gdczln3gqnmd4w5ycnsc6kk29493q3dfvimlbj40z4vjy98wdgj"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; }; + RGraph2js = derive2 { name="RGraph2js"; version="1.14.0"; sha256="00vafaafnydlrh608k0h87px578c8i0a9s3xzv74xss0gx1h5nkh"; depends=[digest graph rjson whisker]; }; + RIPSeeker = derive2 { name="RIPSeeker"; version="1.26.0"; sha256="1wyv9mfrbxzklysfjcnwb8yils71janyyxa982jn0zxx4p9cl3vs"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + RITAN = derive2 { name="RITAN"; version="1.10.0"; sha256="0l76a13jvbx99g3s9iwg1zg1wwbzs75r6hlr2wf032gd5blky38w"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; + RIVER = derive2 { name="RIVER"; version="1.10.0"; sha256="0lhrrr7qfpka3x19sdsjgvpzr4g94851w80idbzf507k7p31f1v3"; depends=[Biobase ggplot2 glmnet pROC]; }; + RImmPort = derive2 { name="RImmPort"; version="1.14.0"; sha256="1zf21mp5mn0c6prs5z9lmfbgjjka5cd789adw19a3v2n9k530kh0"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; + RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.10.0"; sha256="0yj1l88sfcvb2q695zazxw26jgppx7q7qw3lhskf7p05pz5rpgw7"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + RLMM = derive2 { name="RLMM"; version="1.48.0"; sha256="02lmszqs4aahxr2n2ni2d3xrcs7bgfm5sr4b44z8zazcacrap189"; depends=[MASS]; }; + RMassBank = derive2 { name="RMassBank"; version="2.14.1"; sha256="12sg68q1i8h2nzi4qf9izqb9qq89vvl9pzzi2nn353vsx0a4m0c3"; depends=[Biobase digest httr MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; }; + RNASeqPower = derive2 { name="RNASeqPower"; version="1.26.0"; sha256="0gd7bcsg6jd7k7aq2drb86bnvnibzp7asa47qw9wkq5ihz20k44i"; depends=[]; }; + RNASeqR = derive2 { name="RNASeqR"; version="1.4.0"; sha256="1c4c719g4b4xyrkqrfbxxq54ky2vkynrh3ai4jjixj4r8lv2vyj1"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; }; + RNAdecay = derive2 { name="RNAdecay"; version="1.6.0"; sha256="0ymr2xqnz2b39v046qfikai5b2h0w95jqxy85dy8hsppn0r2gnar"; depends=[ggplot2 gplots nloptr TMB]; }; + RNAinteract = derive2 { name="RNAinteract"; version="1.34.0"; sha256="070qy3y532cfhr3v1wiv09pxprgs72dd44igrf5mn77xlbn0xbmy"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; + RNAither = derive2 { name="RNAither"; version="2.34.0"; sha256="1d358kkr5vw7a7i9lfbp692py69yhgg5n3xnx1w8vgsgpdc6mhly"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; + RNAmodR = derive2 { name="RNAmodR"; version="1.0.2"; sha256="1f7gag9fz9pg0lqxph8xf9xwj5skc6dp20gr7brxp91l2di28wap"; depends=[assertive BiocGenerics BiocParallel Biostrings biovizBase BSgenome colorRamps GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges matrixStats Modstrings RColorBrewer reshape2 ROCR Rsamtools rtracklayer S4Vectors stringi stringr XVector]; }; + RNAmodR_AlkAnilineSeq = derive2 { name="RNAmodR.AlkAnilineSeq"; version="1.0.0"; sha256="01bvmc1axqrk826kp3h3l5djskc4x3bqbh9pmv9dk3lhmyn3ilas"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; + RNAmodR_ML = derive2 { name="RNAmodR.ML"; version="1.0.0"; sha256="0g7hagnphjaswybp5k7slwy6q0k66yi72ycfnhvxxniy2ma2g4cf"; depends=[assertive BiocGenerics GenomicRanges IRanges ranger RNAmodR S4Vectors]; }; + RNAmodR_RiboMethSeq = derive2 { name="RNAmodR.RiboMethSeq"; version="1.0.0"; sha256="0pr71l2xfq4bi07y642x2c6h36730mgz2xlzdylgsmwxxw50p3j5"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; + RNAprobR = derive2 { name="RNAprobR"; version="1.18.0"; sha256="0srv204nww6f0rzilwbpfyz1pn3272qqzjsfi4xgniv9qchxayk9"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; }; + RNAsense = derive2 { name="RNAsense"; version="1.0.0"; sha256="1332qqry58xih38q8a5wckbjgl70bgj3y9bz9pn2lz4hmphpil1s"; depends=[ggplot2 NBPSeq qvalue SummarizedExperiment]; }; + ROC = derive2 { name="ROC"; version="1.62.0"; sha256="1aqpyc28czagg3nbybh55vf152nbar61jjw79w04326d97mc3j3y"; depends=[knitr]; }; + ROTS = derive2 { name="ROTS"; version="1.14.0"; sha256="08mwlb0lpprys2b7vif8aj5bnprmn09mm79zz158gbhrv9j9d1qm"; depends=[Biobase Rcpp]; }; + ROntoTools = derive2 { name="ROntoTools"; version="2.14.0"; sha256="1s2507wkkx7p3gbgp7l7n6b32w5wivxwddr5nv94p7fh4pgzp9d5"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; + RPA = derive2 { name="RPA"; version="1.42.0"; sha256="02v2l3ba8nahlbm80rif6gdgj2cjc9cdsjyq9r22vhmj32arj2nh"; depends=[affy BiocGenerics phyloseq]; }; + RProtoBufLib = derive2 { name="RProtoBufLib"; version="1.8.0"; sha256="0dlgki21a37bxqh3cf83vl5zqxm86472g8a9plvhrjzzsn3mwnrm"; depends=[]; }; + RRHO = derive2 { name="RRHO"; version="1.26.0"; sha256="05ail8xfi6mhi3gwq7fjy7amzzs840l7x6s8g7w8bgxz91zk3xgi"; depends=[VennDiagram]; }; + RSVSim = derive2 { name="RSVSim"; version="1.26.0"; sha256="02z0d1jgqr50j5ldvvv2ndmb1wpjwqmzmrr92rxamy7hd9x96f2h"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; + RSeqAn = derive2 { name="RSeqAn"; version="1.6.0"; sha256="0x2bw6lc4x596x41403vgj67fk1c6bz4rkbrzqivn7h3mdn0c2ha"; depends=[Rcpp]; }; + RTCA = derive2 { name="RTCA"; version="1.38.0"; sha256="0zv0akxrwfdsjds9xlm93mck1vsqfmd70djhaw43k9zyvxr6vya3"; depends=[Biobase gtools RColorBrewer]; }; + RTCGA = derive2 { name="RTCGA"; version="1.16.0"; sha256="006cla1r03dzyr5slcsj4vblfbfpjn0jxkwjddiwl9smqlc5kpli"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; + RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.16.2"; sha256="0jyyahhgngy1qh4q72n5hyg2jvl5l4vvgvxffr209j7ng2z3j6v1"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges httr IRanges limma RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; }; + RTN = derive2 { name="RTN"; version="2.10.1"; sha256="0al89sk12k89fk3k4nnas4hhh32x772xj0fm9wy6jwq0494a378i"; depends=[data_table igraph IRanges limma minet mixtools RedeR S4Vectors snow SummarizedExperiment viper]; }; + RTNduals = derive2 { name="RTNduals"; version="1.10.0"; sha256="0m443np16hz1h031hlbchk52r3dhljc9mbkv85f27npz5391pbpa"; depends=[RTN]; }; + RTNsurvival = derive2 { name="RTNsurvival"; version="1.10.0"; sha256="1kmwxkxyrpp82i8fccqxikl6aind3gvzkfrya8cmb0rhvsp971i8"; depends=[data_table dunn_test egg ggplot2 pheatmap RColorBrewer RTN RTNduals scales survival]; }; + RTopper = derive2 { name="RTopper"; version="1.32.0"; sha256="0lzr9l3dnb1q7vs3rvwyfj6jfcagky7g31mdy6vx87m718g6zsm5"; depends=[Biobase limma multtest]; }; + RUVSeq = derive2 { name="RUVSeq"; version="1.20.0"; sha256="1ipbbzpngx988lsmwqv7vbmqm65m43xvsmipayfppkrr6jipzxrj"; depends=[Biobase EDASeq edgeR MASS]; }; + RUVcorr = derive2 { name="RUVcorr"; version="1.18.0"; sha256="15bzvc80gjxcy9bv2kgf2blcy4a1jhnp4d60i4qr60h80z0zkymb"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; + RUVnormalize = derive2 { name="RUVnormalize"; version="1.20.1"; sha256="18cyj7lyqzay0sllb554rcdcfyavfyx8y90q5w6k1phci4dzsrrz"; depends=[Biobase RUVnormalizeData]; }; + RVS = derive2 { name="RVS"; version="1.8.0"; sha256="0j3ya49frbad8w3wk4mm11h3ikznkhf8w3385nzrsngprq8cikpv"; depends=[GENLIB gRain kinship2 snpStats]; }; + RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.10.0"; sha256="0bjlaffls74bkfq41ywbmzw7p1kgfd3s7vjbcyhsynj65cbc3h5j"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.6.0"; sha256="00vy6z74ilm1zxwiql69wyk729lfdq4q0k92x31hq4vk6rlgzzvs"; depends=[dnet igraph Matrix]; }; + RankProd = derive2 { name="RankProd"; version="3.12.0"; sha256="1sr484pbq0jfvl5mh516if0qa2w91sf7knhdjpzs08qi75h938vk"; depends=[gmp Rmpfr]; }; + RareVariantVis = derive2 { name="RareVariantVis"; version="2.14.0"; sha256="0g31n36hpl6razphgpwc3j6imww271mvm1xg4xwiqfcrzqrw6zq8"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + Rariant = derive2 { name="Rariant"; version="1.22.0"; sha256="14imvwx7lzjdmz8i19v17cbj30216qz9a45zp81pcsn64faakbbj"; depends=[BiocGenerics dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; + RbcBook1 = derive2 { name="RbcBook1"; version="1.54.0"; sha256="00af0mqic5mdli63zdbv8j74zlxcsx3w51sh0i7w19fw41fix6sj"; depends=[Biobase graph rpart]; }; + Rbowtie = derive2 { name="Rbowtie"; version="1.26.0"; sha256="0yy31xhdmf6xb21wlhmxxwfqpm0nil39pb2cs3pq5ia758lb88z4"; depends=[]; }; + Rbowtie2 = derive2 { name="Rbowtie2"; version="1.8.0"; sha256="1b7x42n9zisi2w2wwfc0c39j8s9868imyr0ysqgswf6l5mv9ivc5"; depends=[]; }; + Rcade = derive2 { name="Rcade"; version="1.28.0"; sha256="0rhhvrmg94risbap6hildgczhgg1mcwcs4dc9s32l7mn54si5lgi"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; + RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.26.0"; sha256="00p8iznilyxlyx58an01cgpw5sh0caz41zhg0g92yl2kgymj370r"; depends=[flowType graph Rgraphviz sfsmisc]; }; + RcisTarget = derive2 { name="RcisTarget"; version="1.6.0"; sha256="1nnah7s0jd24fpfyxsf76jas8dm23c3266aps124wdlqsp9q5qjw"; depends=[AUCell BiocGenerics data_table feather GSEABase R_utils SummarizedExperiment]; }; + Rcpi = derive2 { name="Rcpi"; version="1.22.0"; sha256="16d9ydxl27yhyba0j302jdj40mi3k1jbkpw7kv38fadi1cr9s726"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; + Rcwl = derive2 { name="Rcwl"; version="1.2.1"; sha256="1bj15pkmfp87hvicyqdp8d4jz514krhp5s9a6px7g5fklw0wc07g"; depends=[batchtools BiocParallel codetools DiagrammeR R_utils S4Vectors shiny yaml]; }; + RcwlPipelines = derive2 { name="RcwlPipelines"; version="1.2.0"; sha256="1mlbm08m20pah8r7abzx13q8s8xnw79nb64ywvp9vcsfhl8vzp2p"; depends=[BiocFileCache dplyr jsonlite rappdirs Rcwl tximport]; }; + Rdisop = derive2 { name="Rdisop"; version="1.46.0"; sha256="0j8gmgkab3njgf4w1vymx96s8pszh5s1zjxn3g07sgj8w883z5v7"; depends=[Rcpp]; }; + ReQON = derive2 { name="ReQON"; version="1.32.0"; sha256="10p6l2zxijqyypdm970jyfqyrnfhaq3nf7cg2q6mgd1srggfa0cx"; depends=[rJava Rsamtools seqbias]; }; + ReactomeGSA = derive2 { name="ReactomeGSA"; version="1.0.0"; sha256="19zb9lz03pl12kcvq4wnqiy3cpyxipjjrs0s610ziy9aw3ygs49w"; depends=[ggplot2 httr jsonlite progress]; }; + ReactomePA = derive2 { name="ReactomePA"; version="1.30.0"; sha256="1vwc9kj1l4yi7c4f4lnq0i3wl2nrmmhcxyakz8qak122fi92z3j1"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; }; + ReadqPCR = derive2 { name="ReadqPCR"; version="1.32.0"; sha256="1iafqadb49g2fwyrps2vlkvzdwg4s4aww39qxi5l06cfy8p0f3ym"; depends=[Biobase]; }; + RedeR = derive2 { name="RedeR"; version="1.34.0"; sha256="0f4k99jkbz1cclh1dzmnk1csvlfzf51nxkqgjc049fxh693vyqcn"; depends=[igraph]; }; + RefNet = derive2 { name="RefNet"; version="1.22.0"; sha256="1bf84q75nyzi5ac2ghbg523iagh972ybqdmrp01jh2sbhqysa835"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; }; + RefPlus = derive2 { name="RefPlus"; version="1.56.0"; sha256="139bc1nixqn5mwhpwmyvix0kp4kvhxqkmq6fmfvw5h7qbhx0w93i"; depends=[affy affyPLM Biobase preprocessCore]; }; + RepViz = derive2 { name="RepViz"; version="1.2.0"; sha256="13cgj2xbid52hlwk8mdha4j2a862d2ijnhd4wnrdbnqx1fvblmy0"; depends=[biomaRt GenomicRanges IRanges Rsamtools S4Vectors]; }; + Repitools = derive2 { name="Repitools"; version="1.32.0"; sha256="0gdjr1x8aas321yaxgv93xnc9p36gy1kqi1cyp97q7q2krkfby16"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; + ReportingTools = derive2 { name="ReportingTools"; version="2.26.0"; sha256="0wmi2219wydyzc07rz3azsrksa7wiacfh9pr5x2fsmj9f0w3n15w"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; + Rgin = derive2 { name="Rgin"; version="1.6.0"; sha256="13xv7v24jf1nmbgycy4nxq81w1car6k1mq5hzwygyf4hq3719g1g"; depends=[RcppEigen]; }; + Rgraphviz = derive2 { name="Rgraphviz"; version="2.30.0"; sha256="00lrkbgbb4payybckcmazsv8skysgdlglyqbl7yjb37vv3gnfc6c"; depends=[graph]; }; + Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.8.0"; sha256="17lhwnm9rqsvbqkvwp0m07vjrk63a4389p2y39zffv8fgznxqzd7"; depends=[]; }; + Rhisat2 = derive2 { name="Rhisat2"; version="1.2.0"; sha256="02fn5cm8sj2s9x00505y3iyipn1r3lpvpwpjy2pdxdbpmhb5hy49"; depends=[GenomicFeatures GenomicRanges SGSeq]; }; + Rhtslib = derive2 { name="Rhtslib"; version="1.18.1"; sha256="0gkbrmrcg55c9s5166ifljlx0v25rv4ijdyp4wf4c292xd6chy2l"; depends=[zlibbioc]; }; + RiboProfiling = derive2 { name="RiboProfiling"; version="1.16.0"; sha256="0nfzyiq7cd6fs5agzl1zyfg8s631wi7kjngiyvd3vxlhi8wsjicx"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; + Ringo = derive2 { name="Ringo"; version="1.50.0"; sha256="1brr4v121h4vq0lldxmb9sqkpwskkg1qwxsnmmwszdynz6m8fdk8"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; + Risa = derive2 { name="Risa"; version="1.28.0"; sha256="0fqm5kbzq2561x87g19h2v178n0myswm6996kgvy5ysnjqnf6iny"; depends=[affy Biobase biocViews Rcpp xcms]; }; + Rmagpie = derive2 { name="Rmagpie"; version="1.42.0"; sha256="17gv90jwig8y7nb5zkfvc81dpz3vdzfqy32ak7chxl60kyk8rph5"; depends=[Biobase e1071 kernlab pamr]; }; + RmiR = derive2 { name="RmiR"; version="1.42.0"; sha256="1irfw3bnxas15lf7xn19i5z9ffp16h757h8jwrhxi875j9nlsxg9"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; + Rmmquant = derive2 { name="Rmmquant"; version="1.4.0"; sha256="0rw2gb7x67d5nd1wjsgr6jb0pps550jvx5vvmjrj9b8vmhd1lqvm"; depends=[BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + RnBeads = derive2 { name="RnBeads"; version="2.4.0"; sha256="1czjjvir6cvy40mi0r7pl8bn8r9qigl4p4dj4182ikmz97cmlg77"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; + RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.17.0"; sha256="0wbxnqhml9ga69jwcpdpawqclvgb34n0f1pvniapyqyvc1pk25l5"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; + Rnits = derive2 { name="Rnits"; version="1.20.0"; sha256="0j7jlf8g8snfafdjfx0kz8n4ccb8knzdc280pszb1dbdvdmrj9ar"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; + Roleswitch = derive2 { name="Roleswitch"; version="1.24.0"; sha256="1sqwkkakxp2wdldfrkfll0dl90l06frxda6dsajgp0qlgzbnjjyp"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; }; + RpsiXML = derive2 { name="RpsiXML"; version="2.28.0"; sha256="1zwa4k6fkv3w4ysl0ig13zkb33jpr1cjib4cqkn7gf1gi29b8ywi"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; + Rqc = derive2 { name="Rqc"; version="1.20.0"; sha256="1nxkrb9kx41g050yz935yrl9pjkakhr8v6whxcvr72gg4r9m2x3m"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; + Rsamtools = derive2 { name="Rsamtools"; version="2.2.3"; sha256="1vj43acawqqkf9yval9fzxarpsf04fmn78m2hq4f083w1k0myhyr"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges Rhtslib S4Vectors XVector zlibbioc]; }; + Rsubread = derive2 { name="Rsubread"; version="2.0.1"; sha256="0pdkx9mhvzw3a4ff725qvda9bxvs9vh2ppb29cc5jrivgjndv5cy"; depends=[]; }; + Rtreemix = derive2 { name="Rtreemix"; version="1.48.0"; sha256="1gxyhzygqjljy8qzp3pz207x5pz071ryzvrqwfzga2jx1h6lzc3i"; depends=[Biobase graph Hmisc]; }; + S4Vectors = derive2 { name="S4Vectors"; version="0.24.3"; sha256="01f7dms4kw9ajwqlvh5s47riv748xrrs41na03byhjvn4fbdc44y"; depends=[BiocGenerics]; }; + SAGx = derive2 { name="SAGx"; version="1.60.0"; sha256="1d2hsci0vigvkg98n415cq66mx58vsyyh5mdwbkmkqfy1q0ary6p"; depends=[Biobase multtest]; }; + SAIGEgds = derive2 { name="SAIGEgds"; version="1.0.1"; sha256="1njm3zmq14ikizf7r9xp637pf8k0ybnyki2ks880cgj7zf9jyvdj"; depends=[gdsfmt Rcpp RcppArmadillo RcppParallel SeqArray SPAtest]; }; + SANTA = derive2 { name="SANTA"; version="2.24.0"; sha256="1p4f6p7ck8qhfpa0wyh4rmilar2k1b7hrwz644yhadq6wc0g6w6p"; depends=[igraph Matrix snow]; }; + SBGNview = derive2 { name="SBGNview"; version="1.0.0"; sha256="1wbqd3zi3iyh5lhy2bgsh7rqv4ab745z6cz7v9m4gv7ml0105rig"; depends=[AnnotationDbi igraph knitr pathview Rdpack rmarkdown rsvg SBGNview_data SummarizedExperiment xml2]; }; + SBMLR = derive2 { name="SBMLR"; version="1.82.0"; sha256="1nvanldh4jf4y6z3kpjv4wl4a5vkj22y62jmfkwbv2cm17xazkk5"; depends=[deSolve XML]; }; + SC3 = derive2 { name="SC3"; version="1.14.0"; sha256="1wdbcjc0qsf14v9l585g9szwwscmm1znbm5kv7js6r36vlpjgzgh"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; }; + SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.28.0"; sha256="0fzl0m38cixkmcwqzxmdlpznd2s3kx1lhzcg8fw262sn93fkisqk"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; + SCANVIS = derive2 { name="SCANVIS"; version="1.0.0"; sha256="0765xn4rfc0b0svxs232n3gibh0akhwzsij9inp8af96q6qqdbvy"; depends=[IRanges plotrix RCurl rtracklayer]; }; + SCBN = derive2 { name="SCBN"; version="1.4.0"; sha256="0i424hk0hqb9b9sjc76533xcq10z41jm6d81c85jwml9gq0bmq78"; depends=[]; }; + SCnorm = derive2 { name="SCnorm"; version="1.8.2"; sha256="1dmz8dmwhyn1s0xahdcza54i3105v2fnqmhhs57wwv46xvr0c9i8"; depends=[BiocGenerics BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; }; + SDAMS = derive2 { name="SDAMS"; version="1.6.0"; sha256="0clg578nmksd0207nnd102qj9m5a64yglqazj6wcbga3vg202g8n"; depends=[qvalue SummarizedExperiment trust]; }; + SELEX = derive2 { name="SELEX"; version="1.18.0"; sha256="10w0gmvlv5kd0w2nac4rr8in2nz81ww7jr9j444awqp4zfa1rp4r"; depends=[Biostrings rJava]; }; + SEPIRA = derive2 { name="SEPIRA"; version="1.6.0"; sha256="0a4z9wnhlcp0b8b9y0075zalnd2ixnwwz96ahdb8wcnbhlpakpmq"; depends=[corpcor limma]; }; + SEtools = derive2 { name="SEtools"; version="1.0.0"; sha256="1p667nq41zm4p28afymz87j3sl9niy7lk45cid1vnhm7fsx4i9wp"; depends=[circlize ComplexHeatmap data_table pheatmap seriation SummarizedExperiment]; }; + SGSeq = derive2 { name="SGSeq"; version="1.20.0"; sha256="0950iv08wd0kjaw55rjn7m6syklvrabwr2zqq74wzyc5afyk2mrw"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; + SIAMCAT = derive2 { name="SIAMCAT"; version="1.6.0"; sha256="0y99mhrancwlr5rab4mgq8bmk7414s82sc46cbzvh1pidvk2bxxl"; depends=[beanplot corrplot glmnet gridBase gridExtra infotheo LiblineaR matrixStats mlr ParamHelpers phyloseq pROC progress PRROC RColorBrewer scales stringr]; }; + SICtools = derive2 { name="SICtools"; version="1.16.0"; sha256="11aqi06wrs2jxakkz5zn41ppzv3z8lbfb80fwm8npkh823i7lnlb"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; + SIM = derive2 { name="SIM"; version="1.56.0"; sha256="140xdixdv56a5lb11xvgc8xda6l1h11x8ajhfj5s0vy0d2vzza7g"; depends=[globaltest quantreg quantsmooth]; }; + SIMAT = derive2 { name="SIMAT"; version="1.18.0"; sha256="0v0h9vjf3pbg5gk431n907ddblyf3618aq3dqjmy617awcgakddb"; depends=[ggplot2 mzR Rcpp reshape2]; }; + SIMD = derive2 { name="SIMD"; version="1.4.0"; sha256="1dq0kdabnb5ydg3iym0xp3rmd0315sr9bi30yizvxkdbqlbvq125"; depends=[edgeR methylMnM statmod]; }; + SIMLR = derive2 { name="SIMLR"; version="1.12.0"; sha256="19qg14mawfnvq0hrfx1p2a5lzl22kdlzal67n7bjlwbyqqrwgmd1"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; + SISPA = derive2 { name="SISPA"; version="1.16.0"; sha256="09p8sk15s40rvfvbhpljcmpgphsl7l4l3mhv1i0rsjgx6g05xciw"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; + SLGI = derive2 { name="SLGI"; version="1.46.0"; sha256="0747pqwwwadk21wxzhr3088ps0hnh0k2zlry7j4i54giqhc6p03c"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; + SLqPCR = derive2 { name="SLqPCR"; version="1.52.0"; sha256="1bq59h7xb384jl10a15g21ms00gd9prwa3pak8vpnjmramkm0jzg"; depends=[]; }; + SMAD = derive2 { name="SMAD"; version="1.2.0"; sha256="10d7j1z7d34miwba0sxavj4974q33dp5xrgvarf7iaxrj24jm4vr"; depends=[dplyr magrittr matrixStats Rcpp tidyr]; }; + SMAP = derive2 { name="SMAP"; version="1.50.0"; sha256="0wi4sn82jlm9ii37k6bcjlhnra7knzncfqkf1nabf4yq9bsaymrn"; depends=[]; }; + SMITE = derive2 { name="SMITE"; version="1.14.0"; sha256="1v5381b74vgaik60ln782qfpv2jbawb99c3fwp7psnm6g7g703f6"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGG_db org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; + SNAGEE = derive2 { name="SNAGEE"; version="1.26.0"; sha256="05vnwhspr29dsv67nhs09z70sdd7cpv61c86fbhpsab5i2l0sj77"; depends=[SNAGEEdata]; }; + SNPRelate = derive2 { name="SNPRelate"; version="1.20.1"; sha256="0vbs2ky9dfrmwsf81ynvvas8dkaav6h3idi6j6zrvijkrwxy2jq0"; depends=[gdsfmt]; }; + SNPchip = derive2 { name="SNPchip"; version="2.32.0"; sha256="11x6aqgzch5iycm9qi7alm6n8nsnwp6zi2lar1mggrncfpbarbf5"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses S4Vectors SummarizedExperiment]; }; + SNPediaR = derive2 { name="SNPediaR"; version="1.12.0"; sha256="1g596g50sr8v4yxx5jpnbaj8rij53yv0y18n8q6dsq97lgwyav3v"; depends=[jsonlite RCurl]; }; + SNPhood = derive2 { name="SNPhood"; version="1.16.0"; sha256="1652b86x3rr4z5lj5ridwdr1j9ldqgzkcb9b0wmdv83i30bv2dkc"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + SPEM = derive2 { name="SPEM"; version="1.26.0"; sha256="0pap0zam2lpjfhh3xpzwrxr44rdz024c6r9q4hcdv5mxami2x3c4"; depends=[Biobase Rsolnp]; }; + SPIA = derive2 { name="SPIA"; version="2.38.0"; sha256="0h4lfd7dmfm3d4382q4r51rm2jc2wkli39cs7nck5yr34yvnqzyg"; depends=[KEGGgraph]; }; + SPLINTER = derive2 { name="SPLINTER"; version="1.12.0"; sha256="0xlb7788mv05w76nvy3z95j1y2mn6903p1c2dy8zpvqcmnjfdvp5"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr S4Vectors seqLogo stringr]; }; + SPONGE = derive2 { name="SPONGE"; version="1.8.0"; sha256="06ia15gl0ks454xplkdc6784v972c86zv62m5ci09jgr2kd913nx"; depends=[Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; + SQLDataFrame = derive2 { name="SQLDataFrame"; version="1.0.0"; sha256="1hm9fbdax1261ca56zwawfyq8cz82khml3by4bd5d29qkk4g8lc9"; depends=[BiocGenerics DBI dbplyr dplyr lazyeval RSQLite S4Vectors tibble]; }; + SQUADD = derive2 { name="SQUADD"; version="1.36.0"; sha256="0lm505l0b1brijv07mxsa8yxd1lzmc1vbkih9dvs1akf1ws2ikg4"; depends=[RColorBrewer]; }; + SRAdb = derive2 { name="SRAdb"; version="1.48.2"; sha256="1cnb0chs7y3wxmmbhlgr3gp8qb1g9xqaw919slm43bvq22wn3y8f"; depends=[GEOquery graph RCurl RSQLite]; }; + SRGnet = derive2 { name="SRGnet"; version="1.12.0"; sha256="13ysx3z37fm0vfiabq7zbjq56ffcblmz8lwwsc70xy4b75a5iisy"; depends=[DMwR EBcoexpress gbm Hmisc igraph limma MASS matrixStats pvclust]; }; + SSPA = derive2 { name="SSPA"; version="2.26.0"; sha256="15qhq0n8gi5cg1y6xcp9dzm9n5dpig1j9nd1lb2zp91k6w2zf25y"; depends=[lattice limma qvalue]; }; + STAN = derive2 { name="STAN"; version="2.14.0"; sha256="0cj17903m413vwqhh7fabzcbn5qfv92b6ylpdpn91r9gac279x08"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; + STATegRa = derive2 { name="STATegRa"; version="1.22.0"; sha256="1rb0f490k97gj0zymyk6v0iwdn33wiwrp423d3hbi8zwd02q1ni2"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; + STRINGdb = derive2 { name="STRINGdb"; version="1.26.0"; sha256="1zjm4s553x9jirdjjr14l6nlzx30j1zdphacxzwiy6kcvv70k1lf"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; + STROMA4 = derive2 { name="STROMA4"; version="1.10.0"; sha256="01i8jf00sgad43i9vjkcjnj1d4ahlrb9x1md286jsi7fs287hl1n"; depends=[Biobase BiocParallel cluster matrixStats]; }; + SVAPLSseq = derive2 { name="SVAPLSseq"; version="1.12.0"; sha256="0qri2fbcwpwsgb4m7xm5z0l7wh8yggq0g4y4c89jvq64zg1qd6kf"; depends=[edgeR ggplot2 limma lmtest pls SummarizedExperiment]; }; + SWATH2stats = derive2 { name="SWATH2stats"; version="1.16.0"; sha256="04lvvh4jnxj0kapxjxcsrvwvb32w9nw3402nf5bmakba8376d1m6"; depends=[biomaRt data_table ggplot2 reshape2]; }; + SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.40.0"; sha256="08ajjfnf7vj6gwwmh1hk0wpnviv7w3afszs2d2h5cqd25n1qqjw0"; depends=[]; }; + ScISI = derive2 { name="ScISI"; version="1.58.0"; sha256="1x9900813cfv00la2ga77l4in5yzila18dxj8w0x5jd87hs0flgs"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; + Scale4C = derive2 { name="Scale4C"; version="1.8.0"; sha256="0bh9sj0x2gh9vri9kpy7ih3rwk3pd5b7lijxmx2g45malb9m9w8a"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; }; + Sconify = derive2 { name="Sconify"; version="1.6.0"; sha256="0hggw68zfs5ql9r5112vkr6vidq423jr83cyc1yfmrnah8rz51ah"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; }; + SemDist = derive2 { name="SemDist"; version="1.20.0"; sha256="0as7r3jgq66liflawza2ly01fm09hz8gxx8ix8f085vd4a2snaw8"; depends=[annotate AnnotationDbi GO_db]; }; + SeqArray = derive2 { name="SeqArray"; version="1.26.2"; sha256="0zqi6jla0r5ixgbiy1w6rridn5y20r49s7cf8d44wk9v1kgan9in"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SeqGSEA = derive2 { name="SeqGSEA"; version="1.26.0"; sha256="0kc9by4ljyh7i2sm9rlv90kcs6sy1was8lryjib3l5qfpgdlav6k"; depends=[Biobase biomaRt DESeq doParallel]; }; + SeqSQC = derive2 { name="SeqSQC"; version="1.8.1"; sha256="1558396jdrrnn7vb66x7157wxqjyr7kvl6r0z7hvhs2bfyw113iy"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; + SeqVarTools = derive2 { name="SeqVarTools"; version="1.24.1"; sha256="1r15l9g4n2b3mlb8j0kyi5p3rm4m6d9j792f7d84scys68zgz3xf"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix rlang S4Vectors SeqArray tidyr]; }; + SharedObject = derive2 { name="SharedObject"; version="1.0.0"; sha256="06vccj2x8wkgmc413g6gdl907ipa62kpnvzikjbmmyk0y8nhadqy"; depends=[BH BiocGenerics Rcpp xptr]; }; + ShortRead = derive2 { name="ShortRead"; version="1.44.3"; sha256="0ykyrj4g6vc67d5s46sp4659qvar2iavflzhggm79w4p50hxia4s"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; + SigCheck = derive2 { name="SigCheck"; version="2.18.0"; sha256="0mxc2kfqqc0nnwlr7pppr2c7hlcfx6qb03wfrkrmczhc9isfkd0s"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; + SigFuge = derive2 { name="SigFuge"; version="1.24.0"; sha256="125v0p2fx5djyijs0vvxxng6clc0x243d8xmz238dylbpbzskwn3"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; + SigsPack = derive2 { name="SigsPack"; version="1.0.0"; sha256="0r1c0rvslxnznyzib0dkkydmcprxv8hzfxlnnjdxvv2ag8wyjch4"; depends=[Biobase Biostrings BSgenome GenomeInfoDb GenomicRanges quadprog rtracklayer SummarizedExperiment VariantAnnotation]; }; + SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.24.0"; sha256="1ca8k2nic015y4lin03j49wdddy09d3js4wga4c6l2gz141s164w"; depends=[Biobase limma mclust Ringo]; }; + SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.8.0"; sha256="11pqb3cigi9xbhxq2k3n7z23v1ibd03ws1lcrh5c5ffgb33nlyw5"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; }; + SingleR = derive2 { name="SingleR"; version="1.0.5"; sha256="0lkhf9r9nbp1fr1vl6nx1byknkf8vz21907sj49fbnnccfwv7l5i"; depends=[beachmat BiocNeighbors BiocParallel DelayedArray DelayedMatrixStats ExperimentHub Matrix Rcpp S4Vectors SummarizedExperiment]; }; + SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.22.0"; sha256="1gvrkahllwz38g3hn9pjlikhfqz19a4qglcqmyrxk7h9ybx5zy5z"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; + SpacePAC = derive2 { name="SpacePAC"; version="1.24.0"; sha256="0qzlg102v50rrgwl718qrsaml44ax571lhw5nbyj21dw017698kk"; depends=[iPAC]; }; + Spaniel = derive2 { name="Spaniel"; version="1.0.0"; sha256="0lw3dpz431bswcmdbswlj1yzbk9l1krv9k9c3zclp4rzm37jlvjq"; depends=[dplyr ggplot2 jpeg magrittr S4Vectors scater Seurat shiny SingleCellExperiment SummarizedExperiment]; }; + SparseSignatures = derive2 { name="SparseSignatures"; version="1.6.0"; sha256="0a0xkfmm44npl3g75nwkpvw3smp5q8c5mgm33rbb8ksh1ijhw7lv"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_1000genomes_hs37d5 data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls]; }; + SpatialCPie = derive2 { name="SpatialCPie"; version="1.2.0"; sha256="1xr0lwp0wkvxw48iw3099bailq3dck52i4jmarfvxgzgjbhyf8zw"; depends=[colorspace data_table dplyr ggforce ggiraph ggplot2 ggrepel igraph lpSolve purrr readr rlang shiny shinycssloaders shinyjs shinyWidgets SummarizedExperiment tibble tidyr tidyselect zeallot]; }; + SpeCond = derive2 { name="SpeCond"; version="1.40.0"; sha256="14gw21ki7hr51mvivhs4ci0lcc7lylfsaxidpl99a5xz2kvph7k8"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; + SpectralTAD = derive2 { name="SpectralTAD"; version="1.2.0"; sha256="1sj6l5rw284zyhlmw38wpjkng23kjahljdrwd27s209ha76cryq3"; depends=[BiocParallel cluster dplyr GenomicRanges HiCcompare magrittr Matrix PRIMME]; }; + SpidermiR = derive2 { name="SpidermiR"; version="1.16.2"; sha256="19nl15gfsg1jz9qbzmkmb1bnjg2plpwg1hcprblrlmf257wb5d2j"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra MAGeCKFlute miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; + SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.26.1"; sha256="0y00pk2zbc9nvwfvrcadcz5d4db1f89baxqbczv5a7mgjn6hs9ni"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; + StarBioTrek = derive2 { name="StarBioTrek"; version="1.12.0"; sha256="1v8n395fzhkdqd198sc0552m1s3m0igqgvlbs1zx8mrz3cijpa4z"; depends=[AnnotationDbi e1071 ggplot2 graphite igraph MLmetrics reshape2 ROCR SpidermiR]; }; + Starr = derive2 { name="Starr"; version="1.42.0"; sha256="1ijccmkwag470k1ck2b0h35iwlbiv7pby8wzsxrxwih6a60xgwln"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; }; + Streamer = derive2 { name="Streamer"; version="1.32.1"; sha256="0rsm13v2gx73pa0599fy5ddn0nyvpjjlnccs177r1dwr32p10yp9"; depends=[BiocGenerics graph RBGL]; }; + Structstrings = derive2 { name="Structstrings"; version="1.2.0"; sha256="04a82yngm5ncj8ykyya7xxilncxmkigi25qh7jw5769frzw1ll92"; depends=[assertive BiocGenerics Biostrings IRanges S4Vectors stringi stringr XVector]; }; + StructuralVariantAnnotation = derive2 { name="StructuralVariantAnnotation"; version="1.2.0"; sha256="1h9mrijs9c7qfk723p79xbz3j2npx1a5dn3sn1ag4k7znbnnqcql"; depends=[assertthat BiocGenerics Biostrings dplyr GenomicRanges rlang rtracklayer stringr VariantAnnotation]; }; + SubCellBarCode = derive2 { name="SubCellBarCode"; version="1.2.6"; sha256="1x5r5brn76ylmvd1isvkxh18iwl34knkdvbbny8pjgd4xhds7jzg"; depends=[AnnotationDbi caret e1071 ggplot2 ggrepel gridExtra networkD3 org_Hs_eg_db Rtsne scatterplot3d]; }; + SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="2.4.0"; sha256="0n9ns50fixdz1x92wd5sjyncyar48cb9c649f44hz5iqd9vjqjrh"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; }; + SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.16.1"; sha256="1z9bdk49dajafkfvv99nv6zyn6v70iyyy2jgdp5w5z8174a2bnn1"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; }; + Sushi = derive2 { name="Sushi"; version="1.24.0"; sha256="15xng21hd09fb234ravrry3b872zg82w8x9lijxab9n96xihcpz5"; depends=[biomaRt zoo]; }; + SwathXtend = derive2 { name="SwathXtend"; version="2.8.0"; sha256="06hv1iwzpmhaqr2f2ky4p808y52awwg4q3jy3jb04c08csqavakw"; depends=[e1071 lattice openxlsx VennDiagram]; }; + SwimR = derive2 { name="SwimR"; version="1.24.0"; sha256="0xg929r1si6l63jjcnmn4qfj4ih0rl4hrqc7fqyxxd5h9b99nlch"; depends=[gplots heatmap_plus R2HTML signal]; }; + SynMut = derive2 { name="SynMut"; version="1.2.0"; sha256="1rnv4msxpvqb9c5wnp2jwxaq9n0gzzmy330dn5akrpnhrq3zghjm"; depends=[BiocGenerics Biostrings seqinr stringr]; }; + TCC = derive2 { name="TCC"; version="1.26.0"; sha256="05l9lgw9ng1npcfd7lhy5mdjmad7zr5s90ihcvvkfpm3510bg4bi"; depends=[baySeq DESeq DESeq2 edgeR ROC]; }; + TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.14.1"; sha256="0s15ky3hnh2aj4rgfckw6wbgfmlhggs1qlisx5hb0wn7364sc6qv"; depends=[biomaRt data_table doParallel downloader dplyr EDASeq edgeR genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel ggthemes gridExtra httr IRanges jsonlite knitr limma plyr purrr purrrogress R_utils RColorBrewer readr rvest S4Vectors scales selectr stringr SummarizedExperiment survival survminer sva tibble tidyr XML xml2]; }; + TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.12.0"; sha256="0jpcrz2zd2p3wdcmi2wr5iw9byg2nkhysifx3787p5qq9dbmvn15"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr sesame shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; }; + TCGAutils = derive2 { name="TCGAutils"; version="1.6.2"; sha256="0dh0qwba71ss75176a500fsn3vfgpn426x92gqyk3zdal30h3030"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; }; + TCseq = derive2 { name="TCseq"; version="1.10.0"; sha256="0739wvq2aaja6dwajdgykzjc5phda1fdx1hhgagwxjpka5g7nx57"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; + TDARACNE = derive2 { name="TDARACNE"; version="1.36.0"; sha256="1x2q82cl8j9iwzaw7vi3s84y25rib3g14ihzyy4jfzf8hq24k0df"; depends=[Biobase GenKern Rgraphviz]; }; + TEQC = derive2 { name="TEQC"; version="4.8.0"; sha256="1wgkjfl0qg72lcrg6zrddshlbw0ankh80darg0l4sgcgzk3g0ndb"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; + TFARM = derive2 { name="TFARM"; version="1.8.0"; sha256="0klnxyc1wx03v33vm211a84fwihyrgh04g5hi07q7a9gf24nnix0"; depends=[arules fields GenomicRanges gplots stringr]; }; + TFBSTools = derive2 { name="TFBSTools"; version="1.24.0"; sha256="1jb6ch4ya1xsb0wxsmnc15zrg1sr2xqrim77s3ask0bppj60ziy8"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; + TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.6.0"; sha256="03w16nc590gvj8wblnfbm5w1m0w6bi4kc98zidal12jiz0c2jbnd"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils]; }; + TFHAZ = derive2 { name="TFHAZ"; version="1.8.0"; sha256="1c0g5pm03s1m73qznylbpbs89zds1v5chclv1wlcfyq7m5gzwssg"; depends=[GenomicRanges IRanges S4Vectors]; }; + TFutils = derive2 { name="TFutils"; version="1.6.0"; sha256="1kvv0cckqhjnd9h6v9lcnvckdcbdxj4yfi6rdb8jc9wh690nbnpn"; depends=[dplyr GSEABase magrittr miniUI Rsamtools shiny]; }; + TIN = derive2 { name="TIN"; version="1.18.0"; sha256="0jqxwkq19kd5cjhhlhvkczhbwgqmw8pbc6niwk2sdf2i6yjkhw4l"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; + TMixClust = derive2 { name="TMixClust"; version="1.8.0"; sha256="0hy6cd52xrniv3wkvwarwq94ryw7q6bmsxa6ayy1d99yjrkfq1nk"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; + TNBC_CMS = derive2 { name="TNBC.CMS"; version="1.2.0"; sha256="1mx190rc1k4zb5cm34f5biyk5lj69blvpv51y73vnbbqmx6w7s6s"; depends=[e1071 forestplot GGally ggplot2 ggpubr GSVA pheatmap pracma quadprog R_utils RColorBrewer SummarizedExperiment survival]; }; + TOAST = derive2 { name="TOAST"; version="1.0.0"; sha256="0pwjy0qj0zpida29r4yca2k8f8cxdfwmgrp3yh58jlvadzxsdhmm"; depends=[EpiDISH RefFreeEWAS SummarizedExperiment]; }; + TPP = derive2 { name="TPP"; version="3.14.1"; sha256="1dck4d2bif9wgppq68jdba1b77n07pfqmzqq0hk682j9vv8n3z52"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown stringr tidyr VennDiagram VGAM]; }; + TPP2D = derive2 { name="TPP2D"; version="1.2.3"; sha256="0y02cq2gffh1difrdva949i8z8ak5w43chkiclvrsr3adziwi9h3"; depends=[doParallel dplyr foreach ggplot2 MASS openxlsx RCurl stringr tidyr]; }; + TRONCO = derive2 { name="TRONCO"; version="2.18.0"; sha256="07hr0j034bwyam2i1iy8vl836h9r35hk55v37ll458yp48fm8a35"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; + TSCAN = derive2 { name="TSCAN"; version="1.24.0"; sha256="021p19j29cdn835xna3b5jfqik0g9ms20dif441a8zy3vn3yj6ab"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; + TSRchitect = derive2 { name="TSRchitect"; version="1.12.4"; sha256="0zzzfylkh3mlzg4hgscp3c7rw10bz2pin6ps1gvs5f2d6fd2534l"; depends=[AnnotationHub BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges readxl Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + TTMap = derive2 { name="TTMap"; version="1.8.0"; sha256="10x2bfgaf37ihr5wjsgy9a858qfqbyyldcf67q0dw49hkdl2j9ln"; depends=[Biobase colorRamps rgl SummarizedExperiment]; }; + TVTB = derive2 { name="TVTB"; version="1.12.0"; sha256="0b2h499w8kcqayqsbw7waabvl821fvi0m63mh7b7wkdwkjqzpnaa"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; + TarSeqQC = derive2 { name="TarSeqQC"; version="1.16.0"; sha256="1w6gki9w7naygh5szdl0h49pwwagcn7kcmw1kf6al0rv5jf1prdd"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; + TargetScore = derive2 { name="TargetScore"; version="1.24.0"; sha256="1glk91cws0nj6jizbfh4pd63l0jdvhz653xvq9gpjbvqqclm8ki1"; depends=[Matrix pracma]; }; + TargetSearch = derive2 { name="TargetSearch"; version="1.42.1"; sha256="1yrm3fbvhf3mmsbq56bda6v4rvahyaj6bm0pdkpym1ikdd9ivfvd"; depends=[assertthat ncdf4 stringr]; }; + TimeSeriesExperiment = derive2 { name="TimeSeriesExperiment"; version="1.4.0"; sha256="0xqa6hzknnci20zx2f6mw5cpqx8pq0v6fzf053hh51p1l2ikvgqm"; depends=[DESeq2 dplyr dynamicTreeCut edgeR ggplot2 Hmisc limma magrittr proxy S4Vectors SummarizedExperiment tibble tidyr vegan viridis]; }; + TissueEnrich = derive2 { name="TissueEnrich"; version="1.6.0"; sha256="05xvqcn5fgmakc33sjnq9ywacr7lpp1y58f3ap11zma4l46hfh8p"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; }; + TitanCNA = derive2 { name="TitanCNA"; version="1.24.0"; sha256="1knhlmxcs5mihmb0h3zxg6c8g91fcrgadiaa0h4wgmzb88lgkndq"; depends=[BiocGenerics data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges VariantAnnotation]; }; + TnT = derive2 { name="TnT"; version="1.8.1"; sha256="1bx91hv00w8wh6nq6zwqbbj09i0yn2wfl87fhi7sgck97vnbdrhs"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; }; + ToPASeq = derive2 { name="ToPASeq"; version="1.20.0"; sha256="0i85y3mkiicdhb4bx1ydjzapmvgm69n3cpwm4l5gr4cdfmwhzfa9"; depends=[Biobase corpcor graph graphite gRbase limma RBGL Rcpp SummarizedExperiment]; }; + TransView = derive2 { name="TransView"; version="1.30.0"; sha256="1w13wrr2r3ic1ykpn4jij8298h0w928n548kfasgdaql9jjw5gi9"; depends=[BiocGenerics GenomicRanges gplots IRanges Rhtslib S4Vectors zlibbioc]; }; + TreeSummarizedExperiment = derive2 { name="TreeSummarizedExperiment"; version="1.2.0"; sha256="04469skp4lbfapca2b02r59dyrjx68hllxanv06ky590hrdy5vd0"; depends=[ape dplyr S4Vectors SingleCellExperiment SummarizedExperiment]; }; + Trendy = derive2 { name="Trendy"; version="1.8.2"; sha256="15fhx429013xyy1qhaif650mrfnyvzsbrmpmda5cx91d93z9qp4s"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; }; + TurboNorm = derive2 { name="TurboNorm"; version="1.34.0"; sha256="12zb7j0hdvalqyfl15c17jskd3wdyg0wkb98qjvfi1kd1d45a8i1"; depends=[affy convert lattice limma marray]; }; + TxRegInfra = derive2 { name="TxRegInfra"; version="1.6.0"; sha256="0hcb79nj2r5imbh4sxswfxfxcywcm4qvm9n8vg8vpq7v4l1syafl"; depends=[BiocParallel GenomeInfoDb GenomicRanges IRanges mongolite RaggedExperiment rjson S4Vectors SummarizedExperiment]; }; + TypeInfo = derive2 { name="TypeInfo"; version="1.52.0"; sha256="06kry8cd0d06c9xkjj7w69kaag9sv9b5cp7b154s130irylw98c0"; depends=[]; }; + UNDO = derive2 { name="UNDO"; version="1.28.0"; sha256="083x7q9rl5iphdqszmb32mqbm5a4pamm127ryar3yq0h2x2rwzyx"; depends=[Biobase BiocGenerics boot MASS nnls]; }; + Ularcirc = derive2 { name="Ularcirc"; version="1.4.0"; sha256="0q4k7602xr8jjvb8b2z1mqdpvdrlbg0qqh76920fpkx3sbqnbbx5"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel gsubfn mirbase_db moments Organism_dplyr S4Vectors shiny shinydashboard shinyFiles shinyjs Sushi yaml]; }; + UniProt_ws = derive2 { name="UniProt.ws"; version="2.26.0"; sha256="08c19jrrizkflwcbyngngg19pgi560zpdyqc2f29l7s0sm82j5xb"; depends=[AnnotationDbi BiocFileCache BiocGenerics rappdirs RCurl RSQLite]; }; + Uniquorn = derive2 { name="Uniquorn"; version="2.6.0"; sha256="0sz4fcxxlkbmprpd540ifb3afp6h3nlmkd2rg9zl6a2cn7pkpagn"; depends=[doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; }; + VCFArray = derive2 { name="VCFArray"; version="1.2.0"; sha256="060pyn32za1pr6n9r2lbav5358k1vvqi5k04f4piwb6zrs8s0d5g"; depends=[BiocGenerics DelayedArray GenomicFiles GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + VanillaICE = derive2 { name="VanillaICE"; version="1.48.0"; sha256="1n927gbc4ha5mbs1zqgzsa0ylfs242dn5s2ya3qpk2dnpx8b42qx"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; + VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.32.0"; sha256="009s7rzp78s2w6iybizina42qx2w8qv3xwjbkpqphmm451maykgs"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; + VariantExperiment = derive2 { name="VariantExperiment"; version="1.0.0"; sha256="1z18b95c1k8pzfndls726qwwbsvljqgf9m2f9jaglsgkz49psxd3"; depends=[Biostrings DelayedArray DelayedDataFrame GDSArray gdsfmt GenomicRanges IRanges S4Vectors SeqArray SeqVarTools SNPRelate SummarizedExperiment]; }; + VariantFiltering = derive2 { name="VariantFiltering"; version="1.22.0"; sha256="13pgfk2mbffd9smmxnwz7g0jrwng78711053wfzadr107zbyn4r8"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; }; + VariantTools = derive2 { name="VariantTools"; version="1.28.0"; sha256="0aafcprsqbn1xl8jqnxfl8r2d0lmzhssqpr26lam2cprh3yk0xiv"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + Vega = derive2 { name="Vega"; version="1.34.0"; sha256="1ispwwmjwdmrs601v84bsjd91hgaqdwfwh9l3d3vbql4qcqhy482"; depends=[]; }; + VegaMC = derive2 { name="VegaMC"; version="3.24.0"; sha256="1d7yfca6syvdrlgypsgk3dzw7abwfjwi6h6ihvpb5p1x0y9kvkkd"; depends=[Biobase biomaRt genoset]; }; + VennDetail = derive2 { name="VennDetail"; version="1.2.0"; sha256="0a1ml6blbq2skcvnf64ijh3wlg0j0ksk506nyqlf0cjcgh8c2w12"; depends=[dplyr futile_logger ggplot2 magrittr purrr tibble UpSetR VennDiagram]; }; + ViSEAGO = derive2 { name="ViSEAGO"; version="1.0.0"; sha256="029k2fmy6ngzaw2qp0q6r6jkv5kf6ywfv2f5b7jkvfx7cgj561lv"; depends=[AnnotationDbi AnnotationForge biomaRt data_table dendextend DiagrammeR DT dynamicTreeCut ggplot2 GO_db GOSemSim heatmaply htmlwidgets igraph plotly R_utils RColorBrewer scales topGO UpSetR webshot]; }; + Wrench = derive2 { name="Wrench"; version="1.4.0"; sha256="1s8d7jn0dk5zk2fhvsd4sgicypz4c41nzf19nqzcwb9bd6asgrwm"; depends=[limma locfit matrixStats]; }; + XBSeq = derive2 { name="XBSeq"; version="1.18.0"; sha256="1qr5gvf8jcx6r0ac7d2wmnikswmp3k71lirnw7dyr6fndzrdz9lp"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; + XCIR = derive2 { name="XCIR"; version="1.0.0"; sha256="1dcsm9fjfpywfr3l5n5rlrpc2imkiylvfz8p6xycxrggg37pcw4s"; depends=[biomaRt data_table ggplot2 IRanges readxl S4Vectors seqminer VariantAnnotation]; }; + XDE = derive2 { name="XDE"; version="2.32.0"; sha256="12syfx7zf529n0lcdr9lxgxsyw3g4ipqc3wnp3xqwb43b0zpvnj3"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools MergeMaid mvtnorm RColorBrewer siggenes]; }; + XINA = derive2 { name="XINA"; version="1.4.0"; sha256="1aydqp18b6hvvnm47bsax3c1q826kx7ba6357f3mzc4z0w7l2djy"; depends=[alluvial Biobase ggplot2 gridExtra igraph mclust plyr STRINGdb]; }; + XVector = derive2 { name="XVector"; version="0.26.0"; sha256="0s2gg84yzl5ffkzp6n7kh0jjk1vd90z189f5hkfn18rn67cy2nv7"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; + Xeva = derive2 { name="Xeva"; version="1.2.0"; sha256="1fkyagzzrj7m4ysgwhw1zwggybw7kgj8fv4n89ki50b8bhk7dljn"; depends=[BBmisc Biobase ComplexHeatmap doParallel downloader ggplot2 nlme PharmacoGx Rmisc scales]; }; + YAPSA = derive2 { name="YAPSA"; version="1.12.0"; sha256="132x51f8k8zyx6j8jk05x4lr9q1hlblgvr69wkhn0q3f8mhaj926"; depends=[circlize ComplexHeatmap corrplot dendextend GenomeInfoDb GenomicRanges GetoptLong ggplot2 gridExtra gtrellis KEGGREST lsei PMCMR reshape2 SomaticSignatures VariantAnnotation]; }; + a4 = derive2 { name="a4"; version="1.34.0"; sha256="14yipy6s2wqr9q0yp09x1mm17npknrhs6yd34i3wrb5id64ywnq4"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; + a4Base = derive2 { name="a4Base"; version="1.34.0"; sha256="0dgqyq4dnlcik5qqygnhxlhfr98sh6kmdcj2qllhrwyk0lmsfk01"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; }; + a4Classif = derive2 { name="a4Classif"; version="1.34.0"; sha256="0gj3hdflfs1ybc2kshl9w1dzy0rfzppfj08hx3wa2chjsm0m9brn"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; }; + a4Core = derive2 { name="a4Core"; version="1.34.0"; sha256="0xcs9wl2yrprl4yc0z5s4zrkil3752k9xc1fi8fcx7zab1mm80df"; depends=[Biobase glmnet]; }; + a4Preproc = derive2 { name="a4Preproc"; version="1.34.0"; sha256="11j5nc33gd6yis1fyagr0y39g21bzkc59kq8b8sd6b3pfc84zrjd"; depends=[AnnotationDbi]; }; + a4Reporting = derive2 { name="a4Reporting"; version="1.34.0"; sha256="15nd4pa5hkdzkhinvqw5ijdqb7k5gk37v2hmk3jsg2d6m0jqphi5"; depends=[annaffy xtable]; }; + aCGH = derive2 { name="aCGH"; version="1.64.0"; sha256="11r0hli1w5lppn08l6i0pb8apn001n0sicnfyc5860i2i4may5jg"; depends=[Biobase cluster multtest survival]; }; + abseqR = derive2 { name="abseqR"; version="1.4.0"; sha256="1n9h5qkj4njr1f8fvhg9sj9wxcd7hljnnk8m80zwswzs2n9ivppa"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; }; + acde = derive2 { name="acde"; version="1.16.0"; sha256="1hdd3v1hvcwa6r1igh6mcjkhfcpagl1x9hkszvb341zvhvx5xdlb"; depends=[boot]; }; + adSplit = derive2 { name="adSplit"; version="1.56.0"; sha256="0k267sfnpr26jmqma7af8iz2ihzjflsyhds3ik3xygdxndbzf6pp"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; + adaptest = derive2 { name="adaptest"; version="1.6.1"; sha256="070lszjd0qc204ahd321c1p8s1hn8ivamgqyp1682928zwvjps3z"; depends=[calibrate origami S4Vectors SummarizedExperiment tmle]; }; + adductomicsR = derive2 { name="adductomicsR"; version="1.2.0"; sha256="0hwa667f2j8bnw5zp3i32sf34kr1z6yqng0qhvw5dwvd05a9q4rf"; depends=[adductData ade4 AnnotationHub bootstrap data_table doSNOW dplyr DT ExperimentHub fastcluster foreach fpc mzR OrgMassSpecR pastecs pracma RcppEigen reshape2 rvest smoother zoo]; }; + affxparser = derive2 { name="affxparser"; version="1.58.0"; sha256="03h4lxr48p84f6i7zb2rm10ma3k4d1nmvdw5yhxcmzqbmd12lk40"; depends=[]; }; + affy = derive2 { name="affy"; version="1.64.0"; sha256="131za66wbaz9y86gvjqcc2yd1f2ngl2b796xw726g75djhdgxgap"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; }; + affyContam = derive2 { name="affyContam"; version="1.44.0"; sha256="0yd1prgv5zfkg22ski73mvg96qknwz8v6ji6s4qy8p4wrqyj7b7l"; depends=[affy affydata Biobase]; }; + affyILM = derive2 { name="affyILM"; version="1.38.0"; sha256="1a49pljs41rbry5ycgl2dbzks4ki41bqanrj4jpips4kkl5qx6cz"; depends=[affxparser affy Biobase gcrma]; }; + affyPLM = derive2 { name="affyPLM"; version="1.62.0"; sha256="0zxmqqa2znw1wivax7h4a66m8iyrshyjbffmi6761q5yijwpvlkc"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; + affyPara = derive2 { name="affyPara"; version="1.46.0"; sha256="0sfr5j1hk0g1rb8cy1dbn1a1ji22pyibk3bwrb79ccf2xii0rww9"; depends=[affy affyio aplpack snow vsn]; }; + affyQCReport = derive2 { name="affyQCReport"; version="1.64.0"; sha256="1z42ynlnf0fkh6n28nbn9kmvzhyc1h69snp8aqsxflqac0mkbbwb"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; + affycomp = derive2 { name="affycomp"; version="1.62.0"; sha256="0cl7c3m2lz2w8g2k7z7wjd0dyj0dkssvms99qpg8a1v3hx1xs6js"; depends=[Biobase]; }; + affycoretools = derive2 { name="affycoretools"; version="1.58.4"; sha256="1p283ysib04qzaayxmrpsmk5bq0jdq2rlky180jrlskpyg6risfw"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 Glimma GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; + affyio = derive2 { name="affyio"; version="1.56.0"; sha256="0sbkadxdlx7qzxc8z8iv90y6j9b2f62mk3i54dijjh56x3hjy3hb"; depends=[zlibbioc]; }; + affylmGUI = derive2 { name="affylmGUI"; version="1.60.0"; sha256="09l1jklj74m77j57iqmaxdyi6qzn95hfiid2d8fbd5ssfjzysgad"; depends=[affy affyio affyPLM BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; }; + affypdnn = derive2 { name="affypdnn"; version="1.60.0"; sha256="0j7bbhx2kqbhf47lkzijznqrf41cyycrh6bsh3zc81kxp72fvjrq"; depends=[affy]; }; + agilp = derive2 { name="agilp"; version="3.18.0"; sha256="0wdmq4jkv82acqbvgnmmkhy0qd3y81k2p11xhn5ilc7xd40r7wxf"; depends=[]; }; + alevinQC = derive2 { name="alevinQC"; version="1.2.0"; sha256="00vls0qcihyh6xy7aazpxl7i6grgn97kj7zqf0i6sj7gsn7qv532"; depends=[cowplot dplyr DT GGally ggplot2 rjson rmarkdown shiny shinydashboard tximport]; }; + alpine = derive2 { name="alpine"; version="1.12.0"; sha256="1niwxqs4s5ywxf5qcnkzarwd3kjbikm84v0zq978w83i105qkhpf"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; + alsace = derive2 { name="alsace"; version="1.22.0"; sha256="1y23zh3kav7rqnbrsg7lqv5hcj08drzbizfyri0k1cygycmid6p2"; depends=[ALS ptw]; }; + altcdfenvs = derive2 { name="altcdfenvs"; version="2.48.0"; sha256="0y9q26prc3acjxqbax3b85v7j7z47ayad3nnzdyk8cqm77as03db"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; + amplican = derive2 { name="amplican"; version="1.8.2"; sha256="059rhvzzc6v48jj3l9yvz52m4ak30lkpi9xrl2bbmyd7clr1l80h"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats Rcpp rmarkdown S4Vectors ShortRead stringr waffle]; }; + anamiR = derive2 { name="anamiR"; version="1.13.0"; sha256="0sh4zvkair02kvpwkpqf9mkzkslzha52xw9gxz9h8i7r9c1lxdj2"; depends=[agricolae DBI DESeq2 gage gplots limma lumi RMySQL S4Vectors SummarizedExperiment]; }; + animalcules = derive2 { name="animalcules"; version="1.2.1"; sha256="0pwrfvylfd2k5nkx2ma5mi9wfr7sy8hmyx46jir90rnkwc2sgp00"; depends=[ape assertthat biomformat caret covr DESeq2 DMwR dplyr DT forcats ggplot2 glmnet lattice limma magrittr Matrix MultiAssayExperiment plotly plotROC reactable rentrez reshape2 S4Vectors scales shiny shinyjs SummarizedExperiment tibble tsne umap vegan XML]; }; + annaffy = derive2 { name="annaffy"; version="1.58.0"; sha256="1jrf4bq2wky4ay1jrcy60si6hxdcn4j05w5vgs38yfb92gq77i16"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; + annmap = derive2 { name="annmap"; version="1.28.0"; sha256="0kw7zwf0gxprximavcjp2psaddr1b916bgas0z82xqyq9p468pgi"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; + annotate = derive2 { name="annotate"; version="1.64.0"; sha256="0rcmdy6hs6m4d6wxgi52c0bhdsbf2sm9f155qbcb05sn0nh8pxwy"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; + annotationTools = derive2 { name="annotationTools"; version="1.60.0"; sha256="1cq7ayq2swp2ahlphz74nh5mb869rgyyr0kkqy1mxyilk8k2g44i"; depends=[Biobase]; }; + annotatr = derive2 { name="annotatr"; version="1.12.1"; sha256="1bibk3p1q4cavqy11xs6rqqhqdjsq2dd7lf7blwcr27s5ajcd6dj"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; }; + anota = derive2 { name="anota"; version="1.34.0"; sha256="1bkavzrxy1bjz0bwapwa9i3ysln7gljgziwd8c05fmg2f46j1z6m"; depends=[multtest qvalue]; }; + anota2seq = derive2 { name="anota2seq"; version="1.8.0"; sha256="1n58dmf08mm7x7hqaz0iqd9h8ds30y3wcg3b006bydl8zpzn3ijl"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; + antiProfiles = derive2 { name="antiProfiles"; version="1.26.0"; sha256="1341xn8c0rgg3z0zjdgl629n3aas10yzzbnm6l0kpgqpask3cbc0"; depends=[locfit matrixStats]; }; + apComplex = derive2 { name="apComplex"; version="2.52.0"; sha256="1n385w12ps40865crp8y3gixwpmdrd8i1k2x1krmgivqa25gkjbw"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; + apeglm = derive2 { name="apeglm"; version="1.8.0"; sha256="13i88n18ishzjdpf02af3kq5bly0zd4s6d1xxr0mxll4l93jq5j7"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; }; + appreci8R = derive2 { name="appreci8R"; version="1.4.0"; sha256="1bnbf6zfnidvl8ib1riya0jyqacb7d5dbp4al8aj41dz151lq378"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ESP6500SI_V2_SSA137_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools rsnps S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; }; + aroma_light = derive2 { name="aroma.light"; version="3.16.0"; sha256="0cgdg650j4dl0b45pwaw49ib97dwjazrv9sqzkygrjmcnnfxry8x"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; + arrayMvout = derive2 { name="arrayMvout"; version="1.44.0"; sha256="0cyw5hckmi907k0b9msxb9r1h1inxnn91fqbs7xfd4znvbn4g0zx"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; + arrayQuality = derive2 { name="arrayQuality"; version="1.64.0"; sha256="07qllcn5rzh2mi0zss8mmngwyz5khmj5cv0qpdrpxvw327jxbrbw"; depends=[gridBase hexbin limma marray RColorBrewer]; }; + arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.42.0"; sha256="1kqshgzaijqg80grlyvsfxiprzdiy4rp91hm0i80lgrxs59k6ihx"; depends=[affy affyPLM beadarray Biobase genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG svglite vsn XML]; }; + artMS = derive2 { name="artMS"; version="1.4.3"; sha256="15dh9zbr1m0is7k6jagw631a6c88giik8svmx66524dnq1igga58"; depends=[AnnotationDbi biomaRt bit64 circlize cluster ComplexHeatmap corrplot data_table dplyr factoextra FactoMineR getopt ggdendro ggplot2 ggrepel gplots gProfileR limma MSstats openxlsx org_Hs_eg_db org_Mm_eg_db PerformanceAnalytics pheatmap plotly plyr RColorBrewer scales seqinr stringr tidyr UpSetR VennDiagram yaml]; }; + atSNP = derive2 { name="atSNP"; version="1.2.0"; sha256="1isrrg51ilc2jhqblwyab6a1wbymillxvmbc4d93lrq4irib4fns"; depends=[BiocFileCache BiocParallel BSgenome data_table ggplot2 motifStack rappdirs Rcpp testit]; }; + attract = derive2 { name="attract"; version="1.38.0"; sha256="04q21rkbn74gl8wkq16f06wh50lvp830ai5fmz932r03z4320f6g"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; + bacon = derive2 { name="bacon"; version="1.14.0"; sha256="1q18vm4znl47v56cnvx9y5ygrial2mdjpl8x1043jq00kyygrc86"; depends=[BiocParallel ellipse ggplot2]; }; + ballgown = derive2 { name="ballgown"; version="2.18.0"; sha256="0zki87bk6id4mb42hp3znvjkag140ivp9s1jbmlalrrxm82abqkq"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; + bamsignals = derive2 { name="bamsignals"; version="1.18.0"; sha256="0699b0pqbs0dvs91yjibcjc90lxj9mg8rcml4a6wchfr9md7n74w"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; + banocc = derive2 { name="banocc"; version="1.10.0"; sha256="19ad5yifw3a1y5f2b1dipzw2ymbqa2aakhzz4kwxgara5yi1gak0"; depends=[coda mvtnorm rstan stringr]; }; + basecallQC = derive2 { name="basecallQC"; version="1.10.0"; sha256="0nr0xspyl3h8rlv8lf5vl3j098jrdfg65p5vgl1lnwyws32nmjhn"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; }; + batchelor = derive2 { name="batchelor"; version="1.2.4"; sha256="1i9zi221xqw34saw671yikcq6c3cd05zvzy6jpb8v5nxd97gick3"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats Matrix Rcpp S4Vectors scater SingleCellExperiment SummarizedExperiment]; }; + bayNorm = derive2 { name="bayNorm"; version="1.4.14"; sha256="04yy43n38y8x4v1112qfi9hi63qpxjds32mca81kzsh1ysrj9ii4"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Matrix Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; }; + baySeq = derive2 { name="baySeq"; version="2.20.0"; sha256="040s1d3756spyzblkyx2vcy7bn3vf87mhsp3is35yxkj55n3myjk"; depends=[abind edgeR GenomicRanges]; }; + bcSeq = derive2 { name="bcSeq"; version="1.8.0"; sha256="11pipxz43llvvk84zs7ich602cc91b1bvhh35m582azyzlhqgz42"; depends=[Biostrings Matrix Rcpp]; }; + beachmat = derive2 { name="beachmat"; version="2.2.1"; sha256="1bpnlw2kdy9yc2vq948k980r0j25ipb80llhvn0j3kxjiwyfgs3i"; depends=[BiocGenerics DelayedArray Matrix]; }; + beadarray = derive2 { name="beadarray"; version="2.36.0"; sha256="0kz9j93mrqs6i2rkp60f2f0drzj4zsagznwq7n8cacc2x1kqmm6l"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 hexbin illuminaio IRanges limma reshape2]; }; + beadarraySNP = derive2 { name="beadarraySNP"; version="1.52.0"; sha256="18kc7pnd11x37xr5168pk2jnhhxp9zb1fyvp44ghw8126khg51c8"; depends=[Biobase quantsmooth]; }; + bgafun = derive2 { name="bgafun"; version="1.48.0"; sha256="0690rqk97nvhw2jlcaaj9ill73jr02fqv60fc82qlp03bday02iq"; depends=[ade4 made4 seqinr]; }; + bgx = derive2 { name="bgx"; version="1.52.0"; sha256="0fiqqv6pin0zhxaw67hzfjccq2qkl9qfqjf10nx2zmpxm2licavm"; depends=[affy Biobase gcrma Rcpp]; }; + bigPint = derive2 { name="bigPint"; version="1.2.2"; sha256="1zkakxi1iqavzmjxnkkd02qm5jk28ldcvcdcxaafz748dz6s67fs"; depends=[dplyr GGally ggplot2 gridExtra hexbin Hmisc htmlwidgets plotly plyr RColorBrewer reshape shiny shinycssloaders shinydashboard stringr tidyr]; }; + bigmelon = derive2 { name="bigmelon"; version="1.12.0"; sha256="0sw7rp4p03m1s72b4j06jfb7as3v1n2w2z4ppk8s4f80fb05bcls"; depends=[Biobase BiocGenerics gdsfmt GEOquery methylumi minfi wateRmelon]; }; + bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.34.0"; sha256="17dk7c44ikphcrpi8hnxyvlmj30qmj098kc0ihfi69bp9rw1cibq"; depends=[bigmemory]; }; + bioCancer = derive2 { name="bioCancer"; version="1.14.02"; sha256="1p1rgnqgdaak2ccdcn7l302d47p9m44i0qz157x09c0xx8dkgzxx"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; + bioDist = derive2 { name="bioDist"; version="1.58.0"; sha256="0iabw07px3ybdgbbab0vv350051cm4aq8w47rz9dnmzx4kil9h5q"; depends=[Biobase KernSmooth]; }; + bioassayR = derive2 { name="bioassayR"; version="1.24.0"; sha256="08vxkvxhqnryfbj4dwk3ifb9pn544www9zk2pj9fjbh5xfpwi7zw"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; + biobroom = derive2 { name="biobroom"; version="1.18.0"; sha256="1480ycdsh9xdhbpr47vdw5g6m8arqsnp8hc19wwhzm8npxh4qqlb"; depends=[Biobase broom dplyr tidyr]; }; + biocGraph = derive2 { name="biocGraph"; version="1.48.0"; sha256="1rv2lwiqwg7h7za23n896fs4dpla3xhw6kzwghb6iw5nlm2m61yw"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; + biocViews = derive2 { name="biocViews"; version="1.54.0"; sha256="0yn8jys1900d31haayz0ppqk5y79mwjajwp4alz6pln3dbs70f3g"; depends=[Biobase BiocManager graph RBGL RCurl RUnit XML]; }; + biomaRt = derive2 { name="biomaRt"; version="2.42.0"; sha256="0difh4dsccjzhpfkvajy2adh98ym9164gd6clnsnic6qr6sk86ss"; depends=[AnnotationDbi BiocFileCache httr openssl progress rappdirs stringr XML]; }; + biomformat = derive2 { name="biomformat"; version="1.14.0"; sha256="0aa32q6sfiy8aqbds2m8gpijz0js8ch9r7wvvsnzbilqqf80zwzr"; depends=[jsonlite Matrix plyr rhdf5]; }; + biomvRCNS = derive2 { name="biomvRCNS"; version="1.26.0"; sha256="1hysm0z4kvx8wcgd3v4wkznnp70ridwr339qgg8dwns9i67wsmfc"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; + biosigner = derive2 { name="biosigner"; version="1.14.4"; sha256="0hypk784xcax99mp673md6kvx45chk2nxbqniww7zm9q2hj983hl"; depends=[Biobase e1071 MultiDataSet randomForest ropls]; }; + biosvd = derive2 { name="biosvd"; version="2.22.0"; sha256="1irj093xiqlar4k88bqmv1jchs948hm8irmi7xi059jv2g2a5mk4"; depends=[Biobase BiocGenerics NMF]; }; + biotmle = derive2 { name="biotmle"; version="1.10.0"; sha256="17197dyl169jfk1134amw06shgah118gs4vlzqfvh5ymrvfy0inn"; depends=[assertthat BiocGenerics BiocParallel doFuture dplyr future ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tibble tmle]; }; + biovizBase = derive2 { name="biovizBase"; version="1.34.1"; sha256="04vvj907bgs67w8rb7n1haf80p6cd0qj5fdxw0dwryb455y35vir"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + birta = derive2 { name="birta"; version="1.30.0"; sha256="1zhlwapdgkz0fpv5bqfxh9aw6ymnmxnnm1r0n0kfzn5izyjavslg"; depends=[Biobase limma MASS]; }; + biscuiteer = derive2 { name="biscuiteer"; version="1.0.0"; sha256="0hgvl1rd2qc6xfsi2882y3h9bfcw6wja5vis20d6q4bvvhs9lm1l"; depends=[Biobase BiocGenerics biscuiteerData bsseq data_table DelayedMatrixStats dmrseq GenomeInfoDb GenomicRanges gtools HDF5Array Homo_sapiens impute Matrix matrixStats Mus_musculus QDNAseq qualV R_utils readr Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + blacksheepr = derive2 { name="blacksheepr"; version="1.0.0"; sha256="0756z7qv0rdfjqpb7xbb22m70dyg2aljm0xnf034bhw5bg8irjg6"; depends=[circlize ComplexHeatmap pasilla RColorBrewer SummarizedExperiment viridis]; }; + blima = derive2 { name="blima"; version="1.20.0"; sha256="0q21hmla6xpjrf8fxjjhvkanlvkr2ry04qf0hzsy804sp3fh26lx"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; + bnbc = derive2 { name="bnbc"; version="1.8.0"; sha256="0pv3vkrdkpv5w2bv6ph0w4m66d96dlybba2h832qh5dgw0dx267f"; depends=[BiocGenerics EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp S4Vectors SummarizedExperiment sva]; }; + brainflowprobes = derive2 { name="brainflowprobes"; version="1.0.0"; sha256="1g124wm87l2xb4p5j8xcm951mqfl3v49bqdn11n3704y9zs6czpm"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 bumphunter cowplot derfinder derfinderPlot GenomicRanges GenomicState ggplot2 RColorBrewer]; }; + branchpointer = derive2 { name="branchpointer"; version="1.12.0"; sha256="14cbxm9krhwxf1s1x9brb71bsbhkg93z5gm3makh7gyy5lh1b28r"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; }; + breakpointR = derive2 { name="breakpointR"; version="1.4.0"; sha256="0pdn4pkb2pnp3n40gd2rbzzkrv0ss4ja5zxz96f2xxp0hv5han0d"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; }; + brendaDb = derive2 { name="brendaDb"; version="1.0.0"; sha256="0phh05kra323fi3qps6qdad3avffvwb7jc9226055qchxmx81mz8"; depends=[BiocFileCache BiocParallel crayon curl dplyr magrittr purrr rappdirs Rcpp rlang stringr tibble tidyr xml2]; }; + bridge = derive2 { name="bridge"; version="1.50.0"; sha256="0g0hdicabfzk0wak3m76y1pv2w9r7hcdaynb2pgzscvisnq5mczl"; depends=[rama]; }; + bsseq = derive2 { name="bsseq"; version="1.22.0"; sha256="12bb3a4p1yn1nwbbxy2zb68b61zmgja5j5yzd49aj3hi5k7q1dhq"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp rhdf5 S4Vectors scales SummarizedExperiment]; }; + bumphunter = derive2 { name="bumphunter"; version="1.28.0"; sha256="1p3gwb954zns61d1pwgkplxnvgk2lixrl93kkkf439wa3vlgsnjv"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; + cTRAP = derive2 { name="cTRAP"; version="1.4.0"; sha256="05skca2wmr6dp1vjfbbdi1ig06g6wv03dikjzml3k5vva5pdnza4"; depends=[biomaRt cowplot data_table dplyr fgsea ggplot2 ggrepel httr limma pbapply R_utils readxl reshape2 rhdf5]; }; + caOmicsV = derive2 { name="caOmicsV"; version="1.16.0"; sha256="0jn0rpmssvrn3z9wnvjb90scbvyvcqkhavqxl4wxg3532rgv569p"; depends=[bc3net igraph]; }; + calm = derive2 { name="calm"; version="1.0.0"; sha256="1vkf2pbhgyvgg6qdglr805c91lsgh8xsqhj8j0lnnky9i379g4sy"; depends=[mgcv]; }; + canceR = derive2 { name="canceR"; version="1.20.0"; sha256="19m0wl8vr1l125g34rahaah2fr82xy1pk5qr1pbzrl45hc7zd1g8"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; + cancerclass = derive2 { name="cancerclass"; version="1.30.0"; sha256="1qqgy2nnbvsj9ks2ipkchr8havwm349gc127ds0bmlb5h0x714h4"; depends=[binom Biobase]; }; + casper = derive2 { name="casper"; version="2.20.0"; sha256="0j2h7y84mdf098kpg8czshchmyc4c7ph5d1idy9zy2was60v2hc7"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; + categoryCompare = derive2 { name="categoryCompare"; version="1.30.0"; sha256="1rmp14q6diviscg6bw9rjs8067vvfmhf06w8k15mpx0vx7pqb1m2"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; + cbaf = derive2 { name="cbaf"; version="1.8.1"; sha256="10r32j0phawq66v6jbldrjydm8574rs6ivmgar0f0mkwpvpnaswn"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; }; + ccfindR = derive2 { name="ccfindR"; version="1.6.0"; sha256="0p1s6dvyp9mpk8mhpayavq44rr7i6ycyq5idycv3dyhps7dypa33"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rdpack Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; }; + ccmap = derive2 { name="ccmap"; version="1.12.0"; sha256="1lwszqb9xh8y59vqsnp42dkkvg2ydmds3wcg55zadk5ld4ndikl4"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; }; + ccrepe = derive2 { name="ccrepe"; version="1.22.0"; sha256="0kwa8lpd9vnjq944ynd51vksnlszlcdc2yjm32d1jcy8gl15qi5c"; depends=[infotheo]; }; + celaref = derive2 { name="celaref"; version="1.4.0"; sha256="11847lq8j38ngja15wl3fmgzly2icsrgwx2vgay2jziwnghc833l"; depends=[BiocGenerics DelayedArray dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; }; + celda = derive2 { name="celda"; version="1.2.4"; sha256="154jsxw89ww5h5lcgpqfyli099m7ps699iv6nz6cw82glrlk4c1h"; depends=[data_table dendextend digest doParallel enrichR foreach ggdendro ggplot2 ggrepel gridExtra gtable magrittr MAST matrixStats MCMCprecision plyr pROC RColorBrewer Rcpp RcppEigen reshape2 Rtsne S4Vectors scales stringi SummarizedExperiment uwot withr]; }; + cellGrowth = derive2 { name="cellGrowth"; version="1.30.0"; sha256="01pfl0yxn3k09viirhp6n89bvr8dylddz81pcfh9sh6r46nrbqmq"; depends=[lattice locfit]; }; + cellHTS2 = derive2 { name="cellHTS2"; version="2.50.0"; sha256="0nmqkqyrd4954kj4zx5n4xnlhmmx7zmiqx712a3dvkj3rgnnmvha"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; + cellTree = derive2 { name="cellTree"; version="1.16.0"; sha256="0cgbmkhjfv7zfir3qx1kq7x2b6cypxvmm12g1l99bfpbplq26whz"; depends=[gplots igraph slam topGO topicmodels xtable]; }; + cellbaseR = derive2 { name="cellbaseR"; version="1.10.0"; sha256="0i0r0a8lgaqprjsv8d3k8fcvqxwbyszi2h0lin4xl3wm3nijk0c9"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; }; + cellity = derive2 { name="cellity"; version="1.14.0"; sha256="1p04dwwi58wxrwn6jpwczys16dp9f3mr7i1dd3815wb8nvfrpps9"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; + cellscape = derive2 { name="cellscape"; version="1.10.0"; sha256="1fswznir81a2yaivmb6792ahi6kpfjyyd6c7zz5w5chahb9a7pa6"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; + cghMCR = derive2 { name="cghMCR"; version="1.44.0"; sha256="09r7kjgrm0i3nv80aq47b97vhg8fi8k6axj31kc5j73vpl022a0k"; depends=[BiocGenerics CNTools DNAcopy limma]; }; + chimera = derive2 { name="chimera"; version="1.28.0"; sha256="09ws9xkczdxyxg6rkm45glahxg8dg1z5f8m5jhr9bbfygcvxmnyz"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; + chimeraviz = derive2 { name="chimeraviz"; version="1.12.3"; sha256="0pnnv1rdakmqq2d60qgn21zb024mhdhk14dglq7jh1g4dxfkgzib"; depends=[AnnotationDbi AnnotationFilter ArgumentCheck BiocStyle Biostrings data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph gtools Gviz IRanges magick org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; }; + chipenrich = derive2 { name="chipenrich"; version="2.10.0"; sha256="1619q668ixjcb2xmx1gscwi8kppfbc445yy1c1kyvmj3qxkmy4jb"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra MASS mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; + chipseq = derive2 { name="chipseq"; version="1.36.0"; sha256="1ln6bn08xig3j6ryak1xfkjhvpnlm2vf1czz9hlj6f02299nbs6l"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; + chopsticks = derive2 { name="chopsticks"; version="1.52.0"; sha256="1v7q5n53sn3g5s3l41ixmq9hm675s9i6rm34dsffq11gyp39fpnl"; depends=[survival]; }; + chroGPS = derive2 { name="chroGPS"; version="2.4.0"; sha256="1fpf6n544q70lfm87hnvxx8288h3102hpdj5h0rsryrvgfbz2xbf"; depends=[Biobase changepoint cluster ellipse GenomicRanges ICSNP IRanges MASS vegan]; }; + chromDraw = derive2 { name="chromDraw"; version="2.16.0"; sha256="1dldh083kc4p9f1ik88amadl9bdjpnyrhcm0gakwaqwi7ymn9qxc"; depends=[GenomicRanges Rcpp]; }; + chromPlot = derive2 { name="chromPlot"; version="1.14.0"; sha256="0z5hcnlz2nd63wrrz133719x0pa51w5ns7azj6wzjamy40p3cfsm"; depends=[biomaRt GenomicRanges]; }; + chromVAR = derive2 { name="chromVAR"; version="1.8.0"; sha256="1gs351fdc715mc04jqjkjdbasgniyrav1qwbm84cqx8pji4yhdzg"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; + chromstaR = derive2 { name="chromstaR"; version="1.12.0"; sha256="0f9qbcrsypvcy3qkw665y5wphjdbs159kb6lgv4vbqdyjyi1n33b"; depends=[bamsignals BiocGenerics chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; + chromswitch = derive2 { name="chromswitch"; version="1.8.0"; sha256="1lcx14s7p6clj4r0cq4r4gfjqggvq1n7lq8zk74kb1y1c3wh0dk6"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; }; + cicero = derive2 { name="cicero"; version="1.4.4"; sha256="1ay1g2r0la4grcp1y8vcp211lfwzjf7j819ajzdirsh5dab8whld"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringr tibble tidyr VGAM]; }; + circRNAprofiler = derive2 { name="circRNAprofiler"; version="1.0.0"; sha256="02kc3g6nxcjn8xvd81aqkxdx3zb9ffl1bw92d9ij68c37nnz753x"; depends=[AnnotationHub Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DESeq2 dplyr edgeR GenomeInfoDb GenomicRanges ggplot2 gwascat IRanges magrittr R_utils readr reshape2 rlang rtracklayer S4Vectors seqinr stringi stringr]; }; + cisPath = derive2 { name="cisPath"; version="1.26.0"; sha256="0p1gnxfv4dwrsbhb6mz36amkwp2h47zdspm31gg92dqjn03l6m7v"; depends=[]; }; + cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.24.0"; sha256="17bsq1fmdx9iqsmi9xk2hl8d7y8cy8ayaldvigyxlll25zq754r1"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomeInfoDb GenomicRanges IRanges seqinr]; }; + cleaver = derive2 { name="cleaver"; version="1.24.0"; sha256="1wx5p12b502z1cfa717z1r7nylfdwrj2w0si66l32ann57plmlrr"; depends=[Biostrings IRanges S4Vectors]; }; + clippda = derive2 { name="clippda"; version="1.36.0"; sha256="1sd4wmmzqjxmrflgw57sdnhh6iy1hamls1hjr2rnf6w9kpjv2q3r"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; + clipper = derive2 { name="clipper"; version="1.26.0"; sha256="080vvimjqs86ibn1xiwpnzj0vhfr6nkibshv58is2lbsngcn7hbd"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; + cliqueMS = derive2 { name="cliqueMS"; version="1.0.1"; sha256="1g1bkdfql97s9rskg9imsf6qnxb7kcylf7w93a4gqr4sgq0lmpyn"; depends=[BH igraph matrixStats MSnbase qlcMatrix Rcpp RcppArmadillo xcms]; }; + clonotypeR = derive2 { name="clonotypeR"; version="1.24.0"; sha256="1sdic5s5kag6r2i4cy2yvalssy0s0bxlm42g5zk357njp7lf1qc5"; depends=[]; }; + clst = derive2 { name="clst"; version="1.34.0"; sha256="1044pjh975hk8yndbs9xf44slnz313w5rbgamc1pn7ba100zmsnh"; depends=[lattice ROC]; }; + clstutils = derive2 { name="clstutils"; version="1.34.0"; sha256="0qsx0d0wkyg31r850q6d28dnzgpjfw3ncfz2j2lnia9j4g36mn72"; depends=[ape clst lattice rjson RSQLite]; }; + clustComp = derive2 { name="clustComp"; version="1.14.0"; sha256="1i1gjm9z1ffw5ircdfc8l768jkfgxkpclmmsbgjkxvaxgbcrhyji"; depends=[sm]; }; + clusterExperiment = derive2 { name="clusterExperiment"; version="2.6.1"; sha256="1dn2a03z491qnqakbbs7kvkjaas1l406s0s6d2mm8jy0724nq94f"; depends=[ape BiocGenerics cluster DelayedArray edgeR HDF5Array howmany kernlab limma locfdr Matrix matrixStats NMF phylobase pracma RColorBrewer Rcpp RSpectra S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; }; + clusterProfiler = derive2 { name="clusterProfiler"; version="3.14.3"; sha256="08pd7bmqmyxncj09ilz8yb9sf1pv9ni98y8b93pz2giy7pl407hg"; depends=[AnnotationDbi DOSE enrichplot ggplot2 GO_db GOSemSim magrittr plyr qvalue rvcheck tidyr]; }; + clusterSeq = derive2 { name="clusterSeq"; version="1.10.0"; sha256="0wzf2lsllz43qdymgjvk57c5x9yglwsc9pigcxnjjv8gsny7s3fd"; depends=[baySeq BiocGenerics BiocParallel]; }; + clusterStab = derive2 { name="clusterStab"; version="1.58.0"; sha256="1kxy4fnir7hgpvx90h1y18mgg7nr2jac1wj9qafz7lv0yfr4h8ab"; depends=[Biobase]; }; + cn_farms = derive2 { name="cn.farms"; version="1.34.0"; sha256="1wprimcbhrz9929x121cy434ny5qsy0s3wjgc105513v6fr7c367"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; + cn_mops = derive2 { name="cn.mops"; version="1.32.0"; sha256="0fbj46papqfbbgw1jcfr83xmlivbdmrqd5s0b8wgaqnp7i4y94dz"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + cnvGSA = derive2 { name="cnvGSA"; version="1.30.0"; sha256="195pqh35qxrwz2mi2m40kcnx1cbc8nakc0dh1akqlp90hfcnkc0l"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; + coGPS = derive2 { name="coGPS"; version="1.30.0"; sha256="09km25bmwqf3g3m63g3jk4gnwgwh4v2flarqq2fjgxp8mr703gz1"; depends=[]; }; + coMET = derive2 { name="coMET"; version="1.18.0"; sha256="1rkp63r2hcfji23np48j7r570imildll7kbika43bfn6c1bkbq83"; depends=[biomaRt colortools corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; }; + coRdon = derive2 { name="coRdon"; version="1.4.0"; sha256="1rnx74vqsk58v9dv3fqwyq90zg2n8dyyacd8b6hjy9qq2idgvgyi"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr stringr]; }; + cobindR = derive2 { name="cobindR"; version="1.24.0"; sha256="0fxh8s03nk2lq2nn6bzbg9wg9721671hwiq1a7swndlmsllvlfsq"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust seqinr yaml]; }; + codelink = derive2 { name="codelink"; version="1.54.0"; sha256="06fprm8fpajl9i1wf23mklj60w77fgliiqz8in6y4x5aqfhms84z"; depends=[annotate Biobase BiocGenerics limma]; }; + coexnet = derive2 { name="coexnet"; version="1.8.0"; sha256="0slyg939k2kbxaynqcrhjan4l9cyacgicpmximanaqjayn1dazba"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; }; + cogena = derive2 { name="cogena"; version="1.20.0"; sha256="1wfxm1g385r0rx68yx8mir0k03r6ryx9i2w7kxk2hbvp6m4m9chd"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; }; + cola = derive2 { name="cola"; version="1.2.1"; sha256="0f0jwpsxkxywfy829swlyzzznsacyfqxg3zhhd1wqcl04c67w8si"; depends=[BiocGenerics brew circlize clue cluster ComplexHeatmap crayon digest eulerr GetoptLong GlobalOptions httr impute knitr markdown matrixStats mclust microbenchmark png RColorBrewer Rcpp skmeans xml2]; }; + compEpiTools = derive2 { name="compEpiTools"; version="1.20.0"; sha256="0zc7mbgr10ldirry5zkwnidjmcmncsxrijsw6a6clyk9hmvpzjkw"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; + compartmap = derive2 { name="compartmap"; version="1.4.0"; sha256="0f996v77qwb57bvmi3xda0niw8kbnna4jwqqj4jwj72x7j1pf6n3"; depends=[GenomicRanges gtools Homo_sapiens minfi mixOmics SummarizedExperiment]; }; + compcodeR = derive2 { name="compcodeR"; version="1.22.0"; sha256="0lkxppbpvpsh1zl5c4781g3yfy7gf36gp53wy0m43q6b4bj92ky4"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; + consensus = derive2 { name="consensus"; version="1.4.0"; sha256="1shp36gml63ys8lifq2h89cq92w59snmnivpgaz0nbphlqdm0w9q"; depends=[gplots matrixStats RColorBrewer]; }; + consensusDE = derive2 { name="consensusDE"; version="1.4.0"; sha256="1brq9wbd5mb4qm208xrxxykialxjnpix17k879ihrq226rpmw0m1"; depends=[airway AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings data_table dendextend DESeq2 EDASeq edgeR EnsDb_Hsapiens_v86 ensembldb GenomicAlignments GenomicFeatures limma org_Hs_eg_db pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; }; + consensusOV = derive2 { name="consensusOV"; version="1.8.1"; sha256="1jvzx5anpns6q45k9xr6j4ygs981sly4ha6wcbshjgkq2mbqp6q7"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; }; + consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.14.0"; sha256="1cva4xb72zmg5nzq20j94vqxn36pipasn1yb7l7ajb2mih1d6cqa"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; + contiBAIT = derive2 { name="contiBAIT"; version="1.14.0"; sha256="0ncpqknapk9w29dsgimcr1bc8b06h09sl9pybx7r7fyprhadsyzp"; depends=[BH BiocGenerics BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; + conumee = derive2 { name="conumee"; version="1.20.0"; sha256="1fh2kkhlqdb2fq9cdxjzbyn9agcr6i7icqgf7aqvgclfliz5bbbp"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; + convert = derive2 { name="convert"; version="1.62.0"; sha256="1i6hq3cdz8xi881hmlxlyv7y9p8d1yj1d8dch9v59bk0nfqdr982"; depends=[Biobase limma marray]; }; + copa = derive2 { name="copa"; version="1.54.0"; sha256="0wc62yxg3jhvn4l5wgr7g2vamgxz4yvk4swrc707kzgy301wa69i"; depends=[Biobase]; }; + copynumber = derive2 { name="copynumber"; version="1.26.0"; sha256="0r6r1adj20x3ckm0dlipxlf1rzngr92xsxxpy81mqxf4jpmyr8gj"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; + coseq = derive2 { name="coseq"; version="1.10.0"; sha256="0rwy92p2l9x5fv4cinw19vffn565fr5l4jz292hrqhngmpmx5s9i"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; + cosmiq = derive2 { name="cosmiq"; version="1.20.0"; sha256="1hgrap9jicwwidp0ri5ybn62r9h2kr9gq3vjz71531y6kpn2csdx"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; + countsimQC = derive2 { name="countsimQC"; version="1.4.0"; sha256="0smf4l9hc90x4ymj77lzb50zhpiv6pnj4jd17qm4ncnxligr74j4"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 randtests rmarkdown SummarizedExperiment tidyr]; }; + covEB = derive2 { name="covEB"; version="1.12.0"; sha256="1pkjhfknvrn48wmkmc5nc6y43sycbayxxfywqdz2zrzvnapm6h5l"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; }; + covRNA = derive2 { name="covRNA"; version="1.12.0"; sha256="1r51xgq9vv6cm1y67bcw44qj8cbs1adg7mk61xrpwghphwjv55gl"; depends=[ade4 Biobase genefilter]; }; + cpvSNP = derive2 { name="cpvSNP"; version="1.18.0"; sha256="0zcqy5d8zzl33wzlrddpd5l6a3p5g7yfaz6smpcxm422z1qx1777"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; + cqn = derive2 { name="cqn"; version="1.32.0"; sha256="1farn0hxidygy7368pf2fc83jr6sw60qq9zqrgwv7032200rhasv"; depends=[mclust nor1mix preprocessCore quantreg]; }; + crisprseekplus = derive2 { name="crisprseekplus"; version="1.12.0"; sha256="0djblb6qc18b0ql1x0fbw4wsgyn8mw16ajvr39g9x9ynb4yqr9sj"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; + crlmm = derive2 { name="crlmm"; version="1.44.0"; sha256="0b13ws69b7508jdl02f26afl3v20ma1xgd2qmnmwnii9ln6bygbn"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; }; + crossmeta = derive2 { name="crossmeta"; version="1.12.0"; sha256="0mm57mf8wvibg7inlq8ij0xhk75jwnw2hq9dhw2w1blwl1jpj7ns"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager ccmap data_table DBI doParallel doRNG DT fdrtool foreach GEOquery ggplot2 limma matrixStats metaMA metap miniUI oligo plotly RColorBrewer RCurl rdrop2 reader reshape RSQLite shiny stringr sva XML]; }; + csaw = derive2 { name="csaw"; version="1.20.0"; sha256="0n4npwd1rsfbxf5p0sbv562qxwfsy1cwcczp8isq2adry2fblmp4"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; + ctc = derive2 { name="ctc"; version="1.60.0"; sha256="0wh27izkyr1j26nznisw654mb5c94xpwjjkx7r6bhwg9ihxxcl6d"; depends=[amap]; }; + ctsGE = derive2 { name="ctsGE"; version="1.12.0"; sha256="10rmm2swfj2rqb8wmw7gi8g7qhq0zfd9hx11s781llrdvk9i3wg6"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; + cummeRbund = derive2 { name="cummeRbund"; version="2.28.0"; sha256="1fjc3bcclm4gsvw4nq6cv3a1kbrldvrxbkyfb9306708si1n4dwk"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; + customProDB = derive2 { name="customProDB"; version="1.26.0"; sha256="0rqxwlpzx0rfkcwph0mhza9q0wp1xlfjn8arb6g8jdqf2whib69r"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; + cycle = derive2 { name="cycle"; version="1.40.0"; sha256="0l7kx4n43n35ndp1f6f9zgxh28nz16w0y5aa3hpgid6872k4cwwk"; depends=[Biobase Mfuzz]; }; + cydar = derive2 { name="cydar"; version="1.10.0"; sha256="139yd6kz1rzqafr78agb1vhzcvwc27yzxvw745yyk9yqjg1vzzak"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; }; + cytofast = derive2 { name="cytofast"; version="1.2.0"; sha256="0dvcbrkrdammvsdyxqbfr7q0jjrxsjiwp473dkz7d94qpaip2ga7"; depends=[flowCore FlowSOM ggplot2 ggridges RColorBrewer Rdpack reshape2]; }; + cytolib = derive2 { name="cytolib"; version="1.8.0"; sha256="1zk5i09k782lw6297gl3rh0g4fxswr2ang8dgqj7p0814l7h15k9"; depends=[]; }; + daMA = derive2 { name="daMA"; version="1.58.0"; sha256="13yng1l24v1b652r9fry7cqnx1j70s7pm13wk2c1qnb98ykjgszc"; depends=[MASS]; }; + dada2 = derive2 { name="dada2"; version="1.14.1"; sha256="0pdqq1r2kic98zf1g75r30zwc73f524jqqlhnphk3h4d7chjzgm3"; depends=[BiocGenerics Biostrings ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; }; + dagLogo = derive2 { name="dagLogo"; version="1.24.0"; sha256="1ncxl636m45ilfdajygpggzab87ag978r67wy768mr31nagclvnz"; depends=[BiocGenerics biomaRt Biostrings grImport2 motifStack pheatmap UniProt_ws]; }; + dcGSA = derive2 { name="dcGSA"; version="1.14.0"; sha256="08sgbjrij0bq5jqkkc2w6f19wj16f12k5jvpqir5q835pqdh4if9"; depends=[BiocParallel Matrix]; }; + dcanr = derive2 { name="dcanr"; version="1.2.0"; sha256="0p7l6wlsmzrfhjms8nvsz0g5dvp0j2rjdb4h4mymy410s25qg8qz"; depends=[circlize doRNG foreach igraph Matrix plyr RColorBrewer reshape2 stringr]; }; + ddCt = derive2 { name="ddCt"; version="1.42.0"; sha256="0jag0wnzywpmz63jv2l3kyzka1g7rg3zrdy58l6qymsmri9jnq7v"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; + ddPCRclust = derive2 { name="ddPCRclust"; version="1.6.0"; sha256="0z6ccmi8lgnkacsiy6zwym0cfspsx2cdnvvn7flhwans6f21q0d5"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; }; + debCAM = derive2 { name="debCAM"; version="1.4.0"; sha256="0p8h445k4amvh3ks34rsh7hz7s4xriyz11b81s7n8hzhdsxbi3by"; depends=[apcluster Biobase BiocParallel corpcor DMwR geometry NMF nnls pcaPP rJava SummarizedExperiment]; }; + debrowser = derive2 { name="debrowser"; version="1.14.2"; sha256="0bvcmhl3rd6118qag3az6i5mvf1vs5apdpm1xabd78kc3zl4m9lm"; depends=[annotate AnnotationDbi clusterProfiler colourpicker d3heatmap DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva]; }; + deco = derive2 { name="deco"; version="1.2.0"; sha256="0npbc6km3c15b3jz9dq8k0zyzpshycj0gbpca95ypjjldw5mg397"; depends=[ade4 AnnotationDbi Biobase BiocParallel BiocStyle cluster foreign gdata ggplot2 gplots gridExtra limma locfit made4 RColorBrewer reshape2 scatterplot3d sfsmisc SummarizedExperiment]; }; + decompTumor2Sig = derive2 { name="decompTumor2Sig"; version="2.2.0"; sha256="01gwcgwz8d49vs38dqrl1qr7crrx29g8f7i9p42jrs7ixqkasxda"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table GenomicFeatures GenomicRanges ggplot2 ggseqlogo gridExtra Matrix plyr quadprog S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation vcfR]; }; + decontam = derive2 { name="decontam"; version="1.6.0"; sha256="1fcqiyc56wnr0cg7ianvwfrz0niz56ppi0rhzjcv89c36ldp3jhs"; depends=[ggplot2 reshape2]; }; + deepSNV = derive2 { name="deepSNV"; version="1.32.0"; sha256="0kanxnb3xhhxki2b447lkcivh1jc3zgjbnam3m4dkp5nbb4yag49"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; + deltaCaptureC = derive2 { name="deltaCaptureC"; version="1.0.0"; sha256="1wk0yikab50ax5fagfyq8g37lc7wpg49h3w6mmsmgf5g6h3yncjc"; depends=[DESeq2 GenomicRanges ggplot2 IRanges SummarizedExperiment]; }; + deltaGseg = derive2 { name="deltaGseg"; version="1.26.0"; sha256="0mgjvhyp52hf1ybidgj4chxnjgw94a23k5kz4smivvy5azqa5h19"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; + derfinder = derive2 { name="derfinder"; version="1.20.0"; sha256="0hpq439j7gkvgb6iyylb48m0i3s13mpxrqmljzzzfbnpb29ndmgh"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; + derfinderHelper = derive2 { name="derfinderHelper"; version="1.20.0"; sha256="0mh20vig4nl6qf7733f5l0bhp6d5gy1vd6fdkcvlzmnmg6zmqaj1"; depends=[IRanges Matrix S4Vectors]; }; + derfinderPlot = derive2 { name="derfinderPlot"; version="1.20.0"; sha256="0bbz3zqbv6gr4mdx0lf3636rhajgrd224ydg84jfxcw1invr8fj1"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; }; + destiny = derive2 { name="destiny"; version="3.0.1"; sha256="1hzg53p1cz21bvnfyyz40bpvjhg89zi3rahlqf0c4w85iwc1i4vi"; depends=[Biobase BiocGenerics ggplot_multistats ggplot2 ggthemes irlba knn_covertree Matrix pcaMethods proxy Rcpp RcppEigen RcppHNSW RSpectra scales scatterplot3d SingleCellExperiment smoother SummarizedExperiment tidyr tidyselect VIM]; }; + dexus = derive2 { name="dexus"; version="1.26.0"; sha256="02xg39jfijzf2r7riz9dc5ybf51l3c38mh66gzvliqkp1hj1l9vq"; depends=[BiocGenerics]; }; + diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.68.0"; sha256="1prr0dkk6lalipai19m3857yjgs7gzikahyx5f19l7pra369mbfq"; depends=[minpack_lm]; }; + diffHic = derive2 { name="diffHic"; version="1.18.0"; sha256="18abr5mzzrag8jnlp29fk2r6sgp2lpyxl4qi0zwmijgmffgcm8si"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; }; + diffcoexp = derive2 { name="diffcoexp"; version="1.6.0"; sha256="01cin5szziv46cqhral7skb7p9y75dlbp23yybv1g3ysji3c6mqh"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; }; + diffcyt = derive2 { name="diffcyt"; version="1.6.1"; sha256="1qfhqjqqf6hgjsyqzhid7snpy0s2gzj9whqhw4pkfpd02pwmxp6p"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; }; + diffloop = derive2 { name="diffloop"; version="1.14.0"; sha256="08aysn0hyldrlmvkz6ay463b89nxil7acdgnqrz1msbbccadsv8b"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; + diffuStats = derive2 { name="diffuStats"; version="1.6.0"; sha256="15gy6z8ldl69i75405fcsg1myndxfbdw3s6mign0nv5p8mnyx59a"; depends=[expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; + diggit = derive2 { name="diggit"; version="1.18.0"; sha256="0spp8pifibda5i0hfsd9sbhdyp6xmcqn1wwfqz2bww1yrzrl2hii"; depends=[Biobase ks viper]; }; + discordant = derive2 { name="discordant"; version="1.10.0"; sha256="06crhc8fw32fnwh1f17plj7f5z85c215ayn1fqca4vii13m7b589"; depends=[Biobase biwt gtools MASS]; }; + divergence = derive2 { name="divergence"; version="1.2.0"; sha256="14agb6r0y90vm3jdqv7zkbvgv07nw74r8fjbk25s0fl8ipx0scmm"; depends=[SummarizedExperiment]; }; + dks = derive2 { name="dks"; version="1.32.0"; sha256="16lr86003skyg5n7dgbqll8c1k824ggpjz3wb5k719gw2rmf678i"; depends=[cubature]; }; + dmrseq = derive2 { name="dmrseq"; version="1.6.0"; sha256="01k36v3j7869ni39v0ns5x38g0zc7i6zvzfz3c85qsdlan3kb2sr"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; }; + doppelgangR = derive2 { name="doppelgangR"; version="1.14.0"; sha256="0qcy9hx7hwq057yqi6697hvsxk65dwqh48f4hv4d48qnsx7h5d8d"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; }; + doseR = derive2 { name="doseR"; version="1.2.0"; sha256="0r8cfb9r52gh4rs6hwaici7a28alwwgr3z112a2ph2f75bcbravl"; depends=[digest edgeR lme4 matrixStats mclust RUnit S4Vectors SummarizedExperiment]; }; + drawProteins = derive2 { name="drawProteins"; version="1.6.0"; sha256="1zqbzqdi1hvkmwcrmdqbpnljvahnqn6b20sm2qyni0yynk036yrl"; depends=[dplyr ggplot2 httr readr stringr tidyr]; }; + dualKS = derive2 { name="dualKS"; version="1.46.0"; sha256="1skddvf6ac3fa2dzg8zv0vmqfx6zpli9arph4yny8xal46s7qr4z"; depends=[affy Biobase]; }; + dupRadar = derive2 { name="dupRadar"; version="1.16.0"; sha256="0raqy48hcibpas7fysx7bd0sl746jkssi9bn5vgqpii8mdk8nv79"; depends=[Rsubread]; }; + dyebias = derive2 { name="dyebias"; version="1.46.0"; sha256="0j9699nan23mf3s9yiidvnlypgcwzz4w7kv3qbksphydycrm6jz8"; depends=[Biobase marray]; }; + easyRNASeq = derive2 { name="easyRNASeq"; version="2.22.2"; sha256="1a78rq2lrchm11f4psyyvg9fz8gv0zkfwd1bb10fid78q80g30hf"; depends=[Biobase BiocFileCache BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD rappdirs Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; + ecolitk = derive2 { name="ecolitk"; version="1.58.0"; sha256="1jh36g8i556n5p8gyz23y1i1n0cj58539m76j0qbzj83jld9x34f"; depends=[Biobase]; }; + edge = derive2 { name="edge"; version="2.18.0"; sha256="178f1nvnaq51z95aizdbf5abxkdzia6s741931w1pq6x1bz9nb60"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; + edgeR = derive2 { name="edgeR"; version="3.28.1"; sha256="07dv99kl7jfa62nzcq705r56gcpb1hq7p4px48j71y2ddi1rqmr6"; depends=[limma locfit Rcpp]; }; + eegc = derive2 { name="eegc"; version="1.12.0"; sha256="0cy1xzjblc0y4ly5syh3q2vh4i5zp5zgq8s2ln4yslw4j2f33dgv"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; + eiR = derive2 { name="eiR"; version="1.26.0"; sha256="0pngb5vns9iad4qda1960jissh6k2rigszsj1lslqav6dff1q5sp"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; + eisa = derive2 { name="eisa"; version="1.38.0"; sha256="0pdilgdhr1k74xljq9nhzn5w20kjqx9wrqxpsmdb4xgikk5dw2ff"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; + enrichTF = derive2 { name="enrichTF"; version="1.2.3"; sha256="01pwzp1381ibq42q3259fc4y8yrpyazv7mfcn8sz2x66d6g26qf1"; depends=[BiocGenerics BSgenome clusterProfiler GenomeInfoDb GenomicRanges ggplot2 ggpubr heatmap3 IRanges JASPAR2018 magrittr motifmatchr pipeFrame R_utils rmarkdown rtracklayer S4Vectors TFBSTools]; }; + enrichplot = derive2 { name="enrichplot"; version="1.6.1"; sha256="0707f5ll58psh7pr001cmmk5di7dprnbry1cy2mw20vn8p24nf3x"; depends=[AnnotationDbi cowplot DOSE europepmc ggplot2 ggplotify ggraph ggridges GOSemSim gridExtra igraph purrr RColorBrewer reshape2]; }; + ensemblVEP = derive2 { name="ensemblVEP"; version="1.28.0"; sha256="0bfp4zsc33xz5k05izc2cs46f1vqc5jvzxf7qq59y5173r03ziai"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; + ensembldb = derive2 { name="ensembldb"; version="2.10.2"; sha256="02lnpyp85zchmz404hr5381zmihvq4x9zgxdrbn2afi352vg0vab"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; + epiNEM = derive2 { name="epiNEM"; version="1.10.0"; sha256="0frmj3r6qcvkyxk17dyx4ma16r46svx76ck1zck4xvgq4zf7xm4j"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet nem pcalg RColorBrewer]; }; + epigenomix = derive2 { name="epigenomix"; version="1.26.0"; sha256="1rf8xjc4n88wdqk6w9kldp6qynw5r50vh763k6g2wijcrf8ihzxq"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; + epihet = derive2 { name="epihet"; version="1.2.0"; sha256="1c9jrv9j9jl6i44rjhl0kcs5n2nrb27ji2sj9jaizpgn44abxzhq"; depends=[data_table doParallel EntropyExplorer foreach GenomicRanges ggplot2 igraph IRanges pheatmap qvalue ReactomePA Rtsne S4Vectors WGCNA]; }; + epivizr = derive2 { name="epivizr"; version="2.16.0"; sha256="1q99yfnrch7kg7qg8l1sw7vr2cnixpphrjq2930m97cl22szydal"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; }; + epivizrChart = derive2 { name="epivizrChart"; version="1.8.0"; sha256="071111z61x9l5gd4x6a3bavv7njr0nxanbiwiss5c3kr6yqrns6b"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; }; + epivizrData = derive2 { name="epivizrData"; version="1.14.0"; sha256="0jqs4knxjywxfkzj4vz0zf5jwwvvyabv48inrigzm01r5dpkv3r2"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; + epivizrServer = derive2 { name="epivizrServer"; version="1.14.0"; sha256="1dc3bffwkvlqrsbb04mkclinyvv5j862jrnl2r16dac1jiky8313"; depends=[httpuv mime R6 rjson]; }; + epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.14.0"; sha256="1zm9yr2hahq59kx71h21qglz028k0rlmxfrqywsh0zxswmisrbr4"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; + erccdashboard = derive2 { name="erccdashboard"; version="1.20.0"; sha256="0gxcf79i5rw7gnv8y6n0c9l6jqvill3jjqv2i6h1lj4agpaclalg"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; + erma = derive2 { name="erma"; version="1.2.0"; sha256="085qsr73p8nyp435f15l4l1jkfd64bfd9gl4z496nfxdnqn95srz"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; }; + esATAC = derive2 { name="esATAC"; version="1.8.0"; sha256="0pjgb3ix0bvdkpddqbb6z2cvmhm3zms8f8ww9cgs58cx7s3wdc3g"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot DiagrammeR digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2016 knitr magrittr motifmatchr R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; + esetVis = derive2 { name="esetVis"; version="1.12.0"; sha256="0i0fi7vbhvyi4hlflczf5csnspwwhm45dnlvr51gd34y1bg15q7d"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; + eudysbiome = derive2 { name="eudysbiome"; version="1.16.0"; sha256="0p6fpf8z60il597fq7n9kawm4ysxrcdhrpmjcc44d1m46xihi4dc"; depends=[Biostrings plyr R_utils Rsamtools]; }; + evaluomeR = derive2 { name="evaluomeR"; version="1.2.41"; sha256="1z9a0alk7paqk0yix9780nz0sfqwbr75725fwrwnhgxk247rc29q"; depends=[cluster corrplot fpc ggdendro ggplot2 matrixStats MultiAssayExperiment plotrix Rdpack reshape2 SummarizedExperiment]; }; + exomeCopy = derive2 { name="exomeCopy"; version="1.32.0"; sha256="0qfwp68ivcwaxcbjyb77bcyp6bmsmlcszjqqnfvqxiyhx6dl5v6r"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; + explorase = derive2 { name="explorase"; version="1.50.0"; sha256="1gk7c7h90g5lxg6n6dqz718fd60y05ckdxx66fr3x4r1bh67a9fk"; depends=[limma rggobi RGtk2]; }; + fCCAC = derive2 { name="fCCAC"; version="1.12.0"; sha256="138cip14cnmjdh3d1fqar9rk2n2vgfvp1mfbzs2wafsbj19avgws"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; + fCI = derive2 { name="fCI"; version="1.16.0"; sha256="1wj704pliljncch9xhy4hmqp62yzwrsxrxdzjj7l533m3laavv1n"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; + fabia = derive2 { name="fabia"; version="2.32.0"; sha256="1nqcb1w93xpljp8avyxbdk6pbjikfrvbzbvdsax235shx0273cvg"; depends=[Biobase]; }; + factDesign = derive2 { name="factDesign"; version="1.62.0"; sha256="0gsn6npfkn5ya8kvw80k5lv0xl7y73a270f1gq3vq0426m547sb4"; depends=[Biobase]; }; + farms = derive2 { name="farms"; version="1.38.0"; sha256="1c2vvinzph3v7vjzcfn62jslxrcif6aq2iw0yg8fc4qxc3ajsvya"; depends=[affy Biobase MASS]; }; + fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.22.0"; sha256="0k0f8ifyhc5jd4hbx1xi6cffkv1i785rcqlpmlfr59f3jiwf4p9j"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; }; + fastseg = derive2 { name="fastseg"; version="1.32.0"; sha256="1cys6frmbizc8bf933mwvvnr31sfya9ahcc0wm66pbd1x3mygkmk"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; + fcScan = derive2 { name="fcScan"; version="1.0.0"; sha256="0cj9gs1880y6wcqg4c2291jy94d72294ypqmkn7541fszdcmyqdp"; depends=[GenomicRanges IRanges plyr rtracklayer SummarizedExperiment VariantAnnotation]; }; + fcoex = derive2 { name="fcoex"; version="1.0.0"; sha256="1mzx6pkaf69n8pqasy5cqim9hlnns8jpwb776zff70db2crmf9zy"; depends=[clusterProfiler data_table dplyr FCBF ggplot2 ggrepel igraph intergraph network pathwayPCA progress scales SingleCellExperiment sna stringr]; }; + fdrame = derive2 { name="fdrame"; version="1.58.0"; sha256="1qw2zl6fycpm4l8vrj844k6s2nsh33lwm832lcxlzc45zjw40jcp"; depends=[]; }; + ffpe = derive2 { name="ffpe"; version="1.30.0"; sha256="0rzvan5cx93ncg24ciz2656h51mh5kq9x7n2ycrpj949snk0kl57"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; + fgsea = derive2 { name="fgsea"; version="1.12.0"; sha256="0pbq3g515kcbi4wvfx8m09p01h2f8vwsi1qqsyahxz4r1fasz4c1"; depends=[BH BiocParallel data_table fastmatch ggplot2 gridExtra Matrix Rcpp]; }; + fishpond = derive2 { name="fishpond"; version="1.2.0"; sha256="0qdgy5n6zxkpd5aqinjl3b00isavp4vpij83vgi3gbxqnfp583kl"; depends=[abind gtools matrixStats qvalue Rcpp S4Vectors SummarizedExperiment svMisc]; }; + flagme = derive2 { name="flagme"; version="1.42.0"; sha256="0h706f0yn9nxc77bb2zpnanhb9s2c6i1yiy5985bp7wqsilx88nk"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; + flowAI = derive2 { name="flowAI"; version="1.16.0"; sha256="14il02kz8m17gvby7n91clp792awgbpb68ny06q2mhzpp9rm6cnj"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; }; + flowBeads = derive2 { name="flowBeads"; version="1.24.0"; sha256="0g48b71rks6gsxxi50hlyvb7zl3rz2193fqrb7h46bxbpcf7w5sw"; depends=[Biobase flowCore knitr rrcov xtable]; }; + flowBin = derive2 { name="flowBin"; version="1.22.0"; sha256="0j3imi0svy05rmfsgiin81pmxvb8g9vfb7g8ybrlaj8qcp15ari7"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; + flowCHIC = derive2 { name="flowCHIC"; version="1.20.0"; sha256="0c90b3p78p2y4100r634nihmfvpd15mxl5kn10d2csyjjzvjd53v"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; + flowCL = derive2 { name="flowCL"; version="1.24.0"; sha256="1wgv2x6k9pqmhs0y5njx6n2wb3zyj0rdgsj171mlwp43v6i4djn2"; depends=[graph Rgraphviz SPARQL]; }; + flowClean = derive2 { name="flowClean"; version="1.24.0"; sha256="1xc0qqijmnb3nh1dzqr5gziikgn8wyqz2v6hz2jhjkkrg9hr9r5p"; depends=[bit changepoint flowCore sfsmisc]; }; + flowClust = derive2 { name="flowClust"; version="3.24.0"; sha256="0k4bgc4mf512njfdfg5ld9l7slgfxyfh766jab87j96zrrgcnj8s"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph mnormt]; }; + flowCore = derive2 { name="flowCore"; version="1.52.1"; sha256="08kvxc187iwlixibx1860jcp5g9bsw8abkv06x2qv1w83fas4pp2"; depends=[BH Biobase BiocGenerics cytolib matrixStats Rcpp]; }; + flowCyBar = derive2 { name="flowCyBar"; version="1.22.0"; sha256="16zf0vvvpzbrb22yhgdjbpj97m69m2fz63hgflxcg6n7l271p6kx"; depends=[gplots vegan]; }; + flowDensity = derive2 { name="flowDensity"; version="1.20.0"; sha256="1yj25mlhj0fz2jfdmzsa3kkgscja527nkqp1x19hianwg0ap2x9h"; depends=[car flowCore flowViz flowWorkspace gplots RFOC rgeos sp]; }; + flowFP = derive2 { name="flowFP"; version="1.44.0"; sha256="0hddklcr2px6xchdr5lr787vwazr7609wfhcanwpk5jiic83y0s6"; depends=[Biobase BiocGenerics flowCore flowViz]; }; + flowFit = derive2 { name="flowFit"; version="1.24.0"; sha256="0ny8jsfizqbnjdkgr93gkhca96lj588lz2s9ciajvqsisb88b647"; depends=[flowCore flowViz gplots kza minpack_lm]; }; + flowMap = derive2 { name="flowMap"; version="1.24.0"; sha256="1hc1ckfx234p7ng9v19l0zxpss70nkrwnyrf3sdjphmpz5ksvpxr"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; + flowMatch = derive2 { name="flowMatch"; version="1.22.0"; sha256="0yn8g3mx5s8wqbdgqf1fil6r8byvg44pa46w6hs61vl4q3zl0flj"; depends=[Biobase flowCore Rcpp]; }; + flowMeans = derive2 { name="flowMeans"; version="1.46.0"; sha256="1yisrikaafmpb4sig2c5l0wcz4idrs4as7i9x90v6z2v94iq0m8h"; depends=[Biobase feature flowCore rrcov]; }; + flowMerge = derive2 { name="flowMerge"; version="2.34.0"; sha256="068wibdpkzm4kapsg2ysbad6lqwd7inc9vmyzkwr1ikymmyac9iw"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; + flowPeaks = derive2 { name="flowPeaks"; version="1.32.0"; sha256="0ylgfrsmwjm09wqbq3lzr891nc4s43kjj9sndpzbvrlqfr2cya1z"; depends=[]; }; + flowPloidy = derive2 { name="flowPloidy"; version="1.12.0"; sha256="191dqis8jnvb41wb2hw73zi4y2abk20asw5r72zsp1491a1rybda"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; + flowPlots = derive2 { name="flowPlots"; version="1.34.0"; sha256="0fpdsl9k86q30f14s2sc77fadrcl2lfhcsmrykq8z6xy9f6r063s"; depends=[]; }; + flowSpecs = derive2 { name="flowSpecs"; version="1.0.2"; sha256="1i0z2a590k6r3v62xjh0092lvz2082091bd3qschls5m1dyz5m20"; depends=[BiocGenerics BiocParallel flowCore ggplot2 reshape2 zoo]; }; + flowSpy = derive2 { name="flowSpy"; version="1.0.4"; sha256="0q8rid59xxmrc85d7kc5r4z08q8y6ll31zhpd6ln4391xr56hkg8"; depends=[Biobase BiocNeighbors cluster destiny flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; }; + flowStats = derive2 { name="flowStats"; version="3.44.0"; sha256="0pql0lpf90nra7w6z6nd8l9cgjlsg2pxysfravnbzfhl3pjvd96w"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow RColorBrewer rrcov]; }; + flowTime = derive2 { name="flowTime"; version="1.10.0"; sha256="1dy9mgai8h6w2pfy51ak2nb16zx0y4j3qbyh7vbhhlrlis1xrz45"; depends=[flowCore plyr]; }; + flowTrans = derive2 { name="flowTrans"; version="1.38.0"; sha256="1dlwn6rgw8shvbifc6z5cjnhwz1z8vq6y4n62m47h1byiri2ds5w"; depends=[flowClust flowCore flowViz]; }; + flowType = derive2 { name="flowType"; version="2.24.0"; sha256="165m8c47dcg1y6v8cpmssir6jhich0gdb52b01b5lf3zl7ysr97n"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; }; + flowUtils = derive2 { name="flowUtils"; version="1.50.0"; sha256="1xcs19j9p3izvksyy5wzsbicwby0dsa9g2w7gjzwynzgj5dpfr81"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; + flowVS = derive2 { name="flowVS"; version="1.18.0"; sha256="17g6dnbyqy5m7d7g8klniqaxnmicpy5f80qn2z4kv2b5pvds659p"; depends=[flowCore flowStats flowViz]; }; + flowViz = derive2 { name="flowViz"; version="1.50.0"; sha256="0ik16bxcfcg3q26ra3055718kskid64aaazcbqsxalca9ppdm4k7"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; + flowWorkspace = derive2 { name="flowWorkspace"; version="3.34.1"; sha256="1ijbc6z9ljhrw3cqr02smgplhrfg44gzrb1dq4gbrpq3nj4khhpn"; depends=[BH Biobase BiocGenerics cytolib data_table digest dplyr flowCore flowViz graph gridExtra lattice latticeExtra matrixStats ncdfFlow RBGL RColorBrewer Rcpp RcppParallel Rgraphviz RProtoBufLib scales stringr]; }; + flowcatchR = derive2 { name="flowcatchR"; version="1.20.0"; sha256="0js2rzabq35ayj9w6v1zlicml90rpk75gbnzk4n679jxbwv5ar23"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; }; + fmcsR = derive2 { name="fmcsR"; version="1.28.0"; sha256="1jksxf9kzik0bd1dx50vpn5cvc9h570rdx33a1fq6i09f63z6ka1"; depends=[BiocGenerics ChemmineR RUnit]; }; + focalCall = derive2 { name="focalCall"; version="1.20.0"; sha256="0q622ibmliyvd50y6svfqam7f4ydrmqajacmf249jfjlsm7kd3a2"; depends=[CGHcall]; }; + frma = derive2 { name="frma"; version="1.38.0"; sha256="1kzi0v803a1n0jzs5yv1rk17p88vk62aq6lhqbsdgdr55fjclmgr"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; + frmaTools = derive2 { name="frmaTools"; version="1.38.0"; sha256="0n7ds1gw2vmq67wkxw749ppj5yy4bs4m39xsjvai6lqzcpdr1xfd"; depends=[affy Biobase DBI preprocessCore]; }; + funtooNorm = derive2 { name="funtooNorm"; version="1.10.0"; sha256="1532ig7zk8l67xnw5392vnlpwhkdnqgbij9qq6r5draw2fjw3y8k"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; + gCMAP = derive2 { name="gCMAP"; version="1.30.0"; sha256="1sgwrwzc3w6v1k890rh1khdsgz8lqqq689xr94k1vxvgqgdvcj2b"; depends=[annotate AnnotationDbi bigmemory bigmemoryExtras Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; + gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.26.0"; sha256="1pdf40p4ww7yzm0hh49j5541i1r6y32jjz02ld3k5j0i13s0afxg"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; + gCrisprTools = derive2 { name="gCrisprTools"; version="1.14.0"; sha256="11frml3hhnffikimwpasrmn7nadal80azfjap4zgi441wixickgm"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; }; + gQTLBase = derive2 { name="gQTLBase"; version="1.18.0"; sha256="1qr8dqjbmj1mdjbzbnxwzfrm8f02wqfsgic8ws5kv7pmsby63y4x"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; + gQTLstats = derive2 { name="gQTLstats"; version="1.18.0"; sha256="1dly4p9r4231hf31xg1nzqiyvjbcfjljfmhb88ic1jxwnvniyv2f"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr erma ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggbeeswarm ggplot2 gQTLBase HardyWeinberg Homo_sapiens IRanges limma mgcv plotly reshape2 S4Vectors shiny snpStats SummarizedExperiment VariantAnnotation]; }; + gaga = derive2 { name="gaga"; version="2.32.0"; sha256="0ffiz855lz73wr9kf3bwfqwpfvxj0ib7bzlabg049l3r4x7vjm3m"; depends=[Biobase coda EBarrays mgcv]; }; + gage = derive2 { name="gage"; version="2.36.0"; sha256="1qxfmg0id19iy3ia8h5nrvk3d1azqb28kl7m08i23654wb6b45c6"; depends=[AnnotationDbi graph KEGGREST]; }; + gaggle = derive2 { name="gaggle"; version="1.54.0"; sha256="19wzcx57cracwx9x7xlfqwlv9fi4ncfngqpzc7y6swhpi8kymxfa"; depends=[graph rJava RUnit]; }; + gaia = derive2 { name="gaia"; version="2.30.0"; sha256="19s74c9nvcb8h45b1b6dmhqzyfz4zzx5jwszgyw74z5il9bhlgy7"; depends=[]; }; + garfield = derive2 { name="garfield"; version="1.14.0"; sha256="1gm8448ww7siwk6gxklgj964wiv2lxpp6rfv7agd2hg8k73j2pkl"; depends=[]; }; + gcapc = derive2 { name="gcapc"; version="1.10.0"; sha256="1aws5n2xa0bgqsrq4dv2pa94ifb451ycvlc17ykydsnx6c1flarf"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; + gcatest = derive2 { name="gcatest"; version="1.16.0"; sha256="1ys39mdqk0v5rvcl6m027dxbi7v3c8ggabmw8a2la4581ashkl1n"; depends=[lfa]; }; + gcrma = derive2 { name="gcrma"; version="2.58.0"; sha256="0c9sa9ldlcpdcjdan8m4ndnyaisr6wbarq486sl44ikh7wf1csfx"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; }; + gdsfmt = derive2 { name="gdsfmt"; version="1.22.0"; sha256="0zc9v62imd0ykz4h30pxa64q0y45qijmkwdk2pd4ncsg8fc2jlz9"; depends=[]; }; + geNetClassifier = derive2 { name="geNetClassifier"; version="1.26.0"; sha256="14hw0gla8jfldv3l7q75v7zchgnkbqxird9mf0xiv0p77vvs6xk2"; depends=[Biobase e1071 EBarrays minet]; }; + geecc = derive2 { name="geecc"; version="1.20.0"; sha256="1hj4rh5gdk253yswqkhz0y95wa5ybd6rgbgjnwz9apvhvmm6gxdm"; depends=[gplots hypergea MASS Rcpp]; }; + gemini = derive2 { name="gemini"; version="1.0.0"; sha256="0vin6h3f3cgjy531lj41p4j3zhv2yfissg3lgfwlynlf51ymjnvb"; depends=[dplyr ggplot2 magrittr mixtools pbmcapply scales]; }; + genArise = derive2 { name="genArise"; version="1.62.0"; sha256="0hzaxjfjg2xyr8gmgk4vwy9cxrvwnsiqbh4jx9qwd1bjfaminzfx"; depends=[locfit tkrplot xtable]; }; + genbankr = derive2 { name="genbankr"; version="1.14.0"; sha256="1sb8irk1ii18q4n1zmsk4vqndq7fgnim07qspdlg2fabwpbz2k6y"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; + geneAttribution = derive2 { name="geneAttribution"; version="1.12.0"; sha256="12v89vb92zl2vkpa4vn4n17srr5cf5f9vdksaw2fpq7xi654crrc"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; + geneClassifiers = derive2 { name="geneClassifiers"; version="1.10.0"; sha256="0ql4ryv5m2l8b4hkdy6ipbhkwskclwfq2953gc0255c84mqrhi19"; depends=[Biobase BiocGenerics]; }; + geneRecommender = derive2 { name="geneRecommender"; version="1.58.0"; sha256="1gwipi1nj1azw0hlc2b9w896grwvh0447f8jxw2g2z23vdq4fbq5"; depends=[Biobase]; }; + geneRxCluster = derive2 { name="geneRxCluster"; version="1.22.0"; sha256="119bfq1z7ly71nm26l2rzwj8w8b02szwhbll622pl3w7kqm5l1kw"; depends=[GenomicRanges IRanges]; }; + geneXtendeR = derive2 { name="geneXtendeR"; version="1.12.0"; sha256="0rkglc7393bhxgzjyafybr9z6frrskv2mkigy1imr04lx8px50dg"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; + genefilter = derive2 { name="genefilter"; version="1.68.0"; sha256="1xjr02qhldspjwd6y374wgik18fgywb6408wsz471i8b4ik98ckc"; depends=[annotate AnnotationDbi Biobase BiocGenerics survival]; }; + genefu = derive2 { name="genefu"; version="2.18.1"; sha256="09dyy98k2d8sld7gn7sms0avp8hxqsj55xl7qjfbxdw53636kvkw"; depends=[AIMS amap biomaRt iC10 impute limma mclust survcomp]; }; + geneplast = derive2 { name="geneplast"; version="1.12.2"; sha256="17y65g501g9gh18n13829znzkzsi787v86ph3wrnxjwcpsa7ryqh"; depends=[ape data_table igraph snow]; }; + geneplotter = derive2 { name="geneplotter"; version="1.64.0"; sha256="1k6780fn1kkghpm1prhhsyw621441a3bmnqfl9ns0zbc1zdq39nx"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; + genoCN = derive2 { name="genoCN"; version="1.38.0"; sha256="0rj9hvaah8x9wcm044wcs5yk7gzphpvwvabpb2wjhmykq8a8bjd6"; depends=[]; }; + genomation = derive2 { name="genomation"; version="1.18.0"; sha256="1sba928h23b67gr3i4yj1bg655g24l3bcgsf5gvymzrv5idrss1l"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; + genomeIntervals = derive2 { name="genomeIntervals"; version="1.42.0"; sha256="1mqhlvjslig1rhdcypi4f6cqwxy5wn1lzmsslg56q7qd3ks7wck7"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; + genomes = derive2 { name="genomes"; version="3.16.0"; sha256="1rn1pgrgc8vgs32miag8yby2i05l1v4har372fjj374aailhszgc"; depends=[curl readr]; }; + genoset = derive2 { name="genoset"; version="1.42.0"; sha256="1x46qfc3p42r6m03vv70a81lsvybjah1b5aa5p4dslff22xbcxmr"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + genotypeeval = derive2 { name="genotypeeval"; version="1.18.0"; sha256="1xd9ys2myb1dqd65x3zkf1fwivi5ylpli3p26z23bj5lgsiyr2by"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; + genphen = derive2 { name="genphen"; version="1.14.0"; sha256="1vm52rray6xnir5vhjb63c99f4dv6dy58xa4fr4rsw0ycj4vm785"; depends=[Biostrings doParallel e1071 foreach ranger Rcpp rPref rstan]; }; + gep2pep = derive2 { name="gep2pep"; version="1.6.0"; sha256="1zqizigfhdy1369pcilwcp9jzch9vz7pr34b03jy41af62a86lpv"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; }; + gespeR = derive2 { name="gespeR"; version="1.18.0"; sha256="1k83d6z39llwjk86cxk47rz3lggdpwix00iapb0q06whg0dhh8di"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; + ggbio = derive2 { name="ggbio"; version="1.34.0"; sha256="13wzwh40anh8l53yp19bg4w5cpxykcaf228dc8cxvjndyib711qb"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + ggcyto = derive2 { name="ggcyto"; version="1.14.1"; sha256="16jwdslhmj1nsa28wmaircy15cq7qn8nsyiawinjv711qiqhgw50"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer rlang scales]; }; + ggtree = derive2 { name="ggtree"; version="2.0.2"; sha256="1lmcw518n6h3rlyl1hsyydfb0k9q7fw0cq551pfx1q9hhi2krb76"; depends=[ape dplyr ggplot2 magrittr purrr rlang rvcheck tidyr tidytree treeio]; }; + girafe = derive2 { name="girafe"; version="1.38.0"; sha256="1yh161yskh00qgkhw7jdp8w18ylciwgmaqywfpm3l0lpbsyhig0y"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; + glmSparseNet = derive2 { name="glmSparseNet"; version="1.4.0"; sha256="1kv9wznag126dsrm8yf04132rzl14q70hhvkgpnc5msammxjclp6"; depends=[biomaRt dplyr forcats futile_logger ggplot2 glmnet loose_rock Matrix MultiAssayExperiment readr reshape2 rlang sparsebn sparsebnUtils STRINGdb stringr SummarizedExperiment survminer]; }; + globalSeq = derive2 { name="globalSeq"; version="1.14.0"; sha256="137bwb1p676yhf2d5x4mnk7xzzap6dxgr9c4y0xw4hrkj2687i4g"; depends=[]; }; + globaltest = derive2 { name="globaltest"; version="5.40.0"; sha256="0265j3vj26d76l63k1y8ligsn9626zg66by5dbc6bw27hwsgrxli"; depends=[annotate AnnotationDbi Biobase survival]; }; + gmapR = derive2 { name="gmapR"; version="1.28.0"; sha256="087pl171cfmvpdgfa10sl0i19n6y4mzr1c1cbgg0ky77fv8jmc2k"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + goProfiles = derive2 { name="goProfiles"; version="1.48.0"; sha256="0l5fkw35j2m26i9wq6s42nr68chpffr0nq88axkl5qqm0kcjh3ry"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; }; + goSTAG = derive2 { name="goSTAG"; version="1.10.0"; sha256="1kcm1zbckgvr6z29d1m35c00m95v84yap2d2arlqb8lvgk5yk0df"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; + goTools = derive2 { name="goTools"; version="1.60.0"; sha256="1fink5xfvhzbdnk224h71n51265s5yqzqcarpz71cim3zwjbnfqh"; depends=[AnnotationDbi GO_db]; }; + goseq = derive2 { name="goseq"; version="1.38.0"; sha256="11ypa41qv1nx3cncxlwlbhdxqlwq95rb9byv2z3crrf9nfp24byv"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; + gpart = derive2 { name="gpart"; version="1.4.0"; sha256="01l0hy83jxbscljzl4vvfi1xa8aixbjpzx3g0pbqwpclwxkqndcq"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + gpls = derive2 { name="gpls"; version="1.58.0"; sha256="1x0p9xi4i3rqmjni1d3f732iba9d8kkzwiai66ny7y4wnfrgs3vp"; depends=[]; }; + gprege = derive2 { name="gprege"; version="1.30.0"; sha256="0qqzkrk8hj7bd6za7nlb7c1i6wg9b1nq6mmsh5hj1wcxc9mfg2l6"; depends=[gptk]; }; + gramm4R = derive2 { name="gramm4R"; version="1.0.0"; sha256="0jf0l44r4avfk58cxd66bhbl6l67fi8svx7i9qd70dygk33jgcdn"; depends=[basicTrendline DelayedArray DMwR investr minerva phyloseq psych SummarizedExperiment]; }; + graper = derive2 { name="graper"; version="1.2.0"; sha256="1y0nm1jhz3p11622xkz1qh3yql7vzlalm663y2qv8kscwbb37x9m"; depends=[BH cowplot ggplot2 Matrix matrixStats Rcpp RcppArmadillo]; }; + graph = derive2 { name="graph"; version="1.64.0"; sha256="1ivf59k7k552m7zd8g3wwazd71dq3xmgmhcq435738i02h0fqnyc"; depends=[BiocGenerics]; }; + graphite = derive2 { name="graphite"; version="1.32.0"; sha256="1r9fk0cpdwm7012pa85dkjcpkml2j89zcznpf4hfdz66anfyyycd"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; + groHMM = derive2 { name="groHMM"; version="1.20.0"; sha256="0ywr8f6bfhg2ia3n4rmsxr4v1xqmlyhkwh0rvkgh3yqgnbvihndg"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; + gscreend = derive2 { name="gscreend"; version="1.0.0"; sha256="1p5kkqq5hbsphgcigx0wbzylmvkgjka85jdmc5j6n727clj9xsfw"; depends=[BiocParallel fGarch nloptr SummarizedExperiment]; }; + gsean = derive2 { name="gsean"; version="1.6.0"; sha256="1lcb3ig2ggc6bv89ipiy0j62gr4gml4skvi1maqpdf362s4b2vga"; depends=[fgsea PPInfer]; }; + gtrellis = derive2 { name="gtrellis"; version="1.18.0"; sha256="0mgspmv6p1a2k98jyy2dfl0wpa2vh7bhnjfm2xaqmcsxzmbjhh9z"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; + gwascat = derive2 { name="gwascat"; version="2.18.0"; sha256="038vhfsk2vs7inn5di093cmjbb81k7j0af385sg7l01jj70bdqq1"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors]; }; + gwasurvivr = derive2 { name="gwasurvivr"; version="1.4.0"; sha256="05fzpdxlxp5gs1sh5wmshmycbbl26m1jqhmqx9jhygkxvxhchq0z"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; }; + h5vc = derive2 { name="h5vc"; version="2.20.0"; sha256="1dbqi1syjs94fww4yn8y8i8v3chklv29n9zhfpm163xxpl6jvyca"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rhtslib Rsamtools S4Vectors]; }; + hapFabia = derive2 { name="hapFabia"; version="1.28.0"; sha256="01m96ms65rqvr9dq2iy6cbj119zmirkayn42aqzc5jprn0fr8lk8"; depends=[Biobase fabia]; }; + heatmaps = derive2 { name="heatmaps"; version="1.10.0"; sha256="0gpar3a0kn2baf5gb66bvf21lbda6ywa7b8p03hbnab85k2r8hg5"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; }; + hiAnnotator = derive2 { name="hiAnnotator"; version="1.20.0"; sha256="1sz8wgqk23vbjw29x0f2dv3qsd1yj7651x174z6142svspmd52wh"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; + hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.22.0"; sha256="1qwbd53n5j7cfb4bjfwmsiwf8vll4iadmaxaw72s5b74bxaik409"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl sonicLength]; }; + hicrep = derive2 { name="hicrep"; version="1.10.0"; sha256="08mfih5nkp3kinvqp8w6jxi9k7n62i675wgg59av741vpszzr56s"; depends=[]; }; + hierGWAS = derive2 { name="hierGWAS"; version="1.16.0"; sha256="0kljcsnbzsp7zg80gxbd2j1r664ijgyn008v7rq28v8w2ar4430g"; depends=[fastcluster fmsb glmnet]; }; + hierinf = derive2 { name="hierinf"; version="1.4.0"; sha256="0zzw5kpfjyqw5qfq3mda7wwr0nhk9vxn93sgf0m9rkiqnl36kp7f"; depends=[fmsb glmnet]; }; + hipathia = derive2 { name="hipathia"; version="2.2.1"; sha256="1gs91r8152n25z4wcqk65a5jx8bdqblspaxc5y40b95gnlyz6m3h"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; }; + hmdbQuery = derive2 { name="hmdbQuery"; version="1.6.1"; sha256="114mi89wc8s10mgagsrg52cbbvndw21qvfmax2nih22r53g1phjn"; depends=[S4Vectors XML]; }; + hopach = derive2 { name="hopach"; version="2.46.0"; sha256="085k66hv3jdrpas2nfa7ymva1gwbq1laaxis8qg6qn5srjsl7bir"; depends=[Biobase BiocGenerics cluster]; }; + hpar = derive2 { name="hpar"; version="1.28.0"; sha256="1yhay1ryrgj9cqa1x136cw40ca93afyvg0sarm30jsbj8nc1rm5m"; depends=[]; }; + hypeR = derive2 { name="hypeR"; version="1.2.0"; sha256="0zrpx25casvdny16zzn0b6ldkr6brdx9cr68ski0jrwai88qgg8r"; depends=[dplyr DT ggforce ggplot2 gh igraph kableExtra magrittr msigdbr openxlsx purrr R6 rlang rmarkdown scales visNetwork]; }; + hyperdraw = derive2 { name="hyperdraw"; version="1.38.0"; sha256="0a8h3pb7196qi49ady8ni92m5wqb1hvxw6khk9j63mwj3h7jinbj"; depends=[graph hypergraph Rgraphviz]; }; + hypergraph = derive2 { name="hypergraph"; version="1.58.0"; sha256="1bixmslxy7r987zw1vf4dg72hfi04lf4vj03n7ygym2g8nfhbh7m"; depends=[graph]; }; + iASeq = derive2 { name="iASeq"; version="1.30.0"; sha256="0p0xb5c4ll6cxh6z0vxwss59xc36xsm9nkbpgdagqrfjqym0iakm"; depends=[]; }; + iBBiG = derive2 { name="iBBiG"; version="1.30.0"; sha256="1sb51mlb2aayb14z3ki3qgzkmzqsqn70k0akcwkxm3411fawlmip"; depends=[ade4 biclust xtable]; }; + iBMQ = derive2 { name="iBMQ"; version="1.26.0"; sha256="1i5diz2p2xzxbdxjn18zsh8qpfw27ydf9wnyq0c8h759q5yxn2x5"; depends=[Biobase ggplot2]; }; + iCARE = derive2 { name="iCARE"; version="1.14.0"; sha256="1v3phjn551xr9rxq8ck2zql0mj0p2jbizbghfnc8zmzirs7kh4ya"; depends=[gtools Hmisc plotrix]; }; + iCNV = derive2 { name="iCNV"; version="1.6.0"; sha256="185kp6smgpz9gd484vhx2k88rrwiszjckacvjjddrcvgwjzl1qvy"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; }; + iCOBRA = derive2 { name="iCOBRA"; version="1.14.0"; sha256="1l0yr2grpwmr3pc5h50p1j4nxyb1ddmc55l7rhxpp4igh4fq1avz"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; + iCheck = derive2 { name="iCheck"; version="1.16.0"; sha256="0r35k27d1l0zg0gmyfy4dd3kqvwjhbqk7a3wcrasqnpqy1xw44kn"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; + iChip = derive2 { name="iChip"; version="1.40.0"; sha256="161n54q7z7vzgz8bwwbd1b97pqsicjhg8kk4gmhicza1rw081zh9"; depends=[limma]; }; + iClusterPlus = derive2 { name="iClusterPlus"; version="1.22.0"; sha256="1dzgfzf2x8m62hssvsn1zzag7m444kyxj2vpdxl9nk859dr5pf37"; depends=[]; }; + iGC = derive2 { name="iGC"; version="1.16.0"; sha256="1ff58ik1sqjr8w4az6xk9jjga4k0wni2w4jyrvyn89v9zkmfvyq3"; depends=[data_table plyr]; }; + iPAC = derive2 { name="iPAC"; version="1.30.0"; sha256="0pw60ybraw5g9rfrw3hn3q2zdlddk8cgsv2snibkgrldp4rzfbr0"; depends=[Biostrings gdata multtest scatterplot3d]; }; + iSEE = derive2 { name="iSEE"; version="1.6.1"; sha256="0sg72r78qn7w1vni8pwyn0njwhib0yfd92vfvqq5pwqx403ys3b3"; depends=[AnnotationDbi BiocGenerics colourpicker cowplot dplyr DT ggplot2 igraph mgcv rentrez reshape2 rintrojs S4Vectors scales shiny shinyAce shinydashboard shinyjs SingleCellExperiment SummarizedExperiment vipor viridisLite]; }; + iSeq = derive2 { name="iSeq"; version="1.38.0"; sha256="1cmj5247f8wfgcp5qksv3ss8h98rsk70v1hsw0rfm36wz2qf2713"; depends=[]; }; + iasva = derive2 { name="iasva"; version="1.4.0"; sha256="0fqywk3g9gdcpxix4g1b3b3gfy1z30y87ib7r6lw93qi3ylj5bvg"; depends=[BiocParallel cluster irlba SummarizedExperiment]; }; + ibh = derive2 { name="ibh"; version="1.34.0"; sha256="1kxpmyaq7f5d4hb3llxgbh32zdj7d5azkrdnfaikdpjhmmqsv81v"; depends=[simpIntLists]; }; + icetea = derive2 { name="icetea"; version="1.4.0"; sha256="1xpfpb97n64f0pv5nnbini77bbcrmf35fmcz6snl5d3k2d7gj05n"; depends=[BiocGenerics BiocParallel Biostrings csaw DESeq2 edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; }; + ideal = derive2 { name="ideal"; version="1.10.0"; sha256="0iskqbdl9xifya47m4pg8aqm8ssrpip11i7713xy0b033bk641ij"; depends=[AnnotationDbi base64enc BiocParallel d3heatmap DESeq2 dplyr DT GenomicRanges ggplot2 ggrepel GO_db goseq GOstats gplots IHW IRanges knitr limma pcaExplorer pheatmap rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; + idiogram = derive2 { name="idiogram"; version="1.62.0"; sha256="08ahl8lifr2q3xlkrlsx39hmhy3nkn2yqqhal144aszg1v1w316j"; depends=[annotate Biobase plotrix]; }; + idr2d = derive2 { name="idr2d"; version="1.0.3"; sha256="0y3zb7lrxv8qp9bvy7s4gn0d2cf8wda4aqhpb414qz3wxwkiira5"; depends=[dplyr futile_logger GenomeInfoDb GenomicRanges ggplot2 idr IRanges magrittr reticulate scales stringr]; }; + igvR = derive2 { name="igvR"; version="1.6.1"; sha256="0brzlb4nivwg6j4wc4s31fhm5z99f1d9fpr275fqhfp7fqvwksyk"; depends=[BiocGenerics BrowserViz GenomicAlignments GenomicRanges httpuv MotifDb randomcoloR rtracklayer seqLogo VariantAnnotation]; }; + illuminaio = derive2 { name="illuminaio"; version="0.28.0"; sha256="1psza8jq6h8fv2rm91ah67dgjlnj1l80yracwgdl1agd0ycv90sh"; depends=[base64]; }; + imageHTS = derive2 { name="imageHTS"; version="1.36.0"; sha256="1p8419zjkmxjmkfmj2a3xffaxp1bdxqz6hsm3x7h2w5xd29g3jqb"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; + immunoClust = derive2 { name="immunoClust"; version="1.18.0"; sha256="0ahgppfpgvwqi2rcgkldr785n3vdaszp42pqsrljmlz2i4znig94"; depends=[flowCore lattice]; }; + impute = derive2 { name="impute"; version="1.60.0"; sha256="0igz1phjd1j9bg9z4kyy7j8v9bxi9sdwz4df26r51i2vavlbrf4q"; depends=[]; }; + infercnv = derive2 { name="infercnv"; version="1.2.1"; sha256="0aqcxmjkrxw7lyqvlpqdvzh690bjydbqqx8xxvmzh8w1y9gsr492"; depends=[ape argparse BiocGenerics caTools coda coin digest doParallel dplyr edgeR fastcluster fitdistrplus foreach futile_logger future ggplot2 gplots gridExtra HiddenMarkov Matrix RColorBrewer reshape rjags SingleCellExperiment SummarizedExperiment tidyr]; }; + intansv = derive2 { name="intansv"; version="1.26.0"; sha256="1fpvcy46gili5j6vgclfiz101405gkwpvbpkxn2fhbdqs08n2gnx"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; + interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.24.0"; sha256="0y2q0l686zfj3yvyiwvbp2qm775ha6v7d85hvpxfs8g39vhqn2qn"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; + interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.24.0"; sha256="0zwf3ma6wf4zypl6bgjp0n72k2hmp0g16gzl4v3y4157rxcbpl0n"; depends=[BiocGenerics shiny]; }; + inveRsion = derive2 { name="inveRsion"; version="1.34.0"; sha256="02zrgg6xg6x56h42nppqvvi0s54rhbv6qvgcmjgbizhq1l1dkx9k"; depends=[haplo_stats]; }; + ipdDb = derive2 { name="ipdDb"; version="1.4.0"; sha256="069q37c46mavggbm3gyvr9f3d6ckfz5yv1gadhw2alms4585xg0q"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; }; + isobar = derive2 { name="isobar"; version="1.32.0"; sha256="1cc8780kqzxl38j6vlh3dfrwjws5whlgsx5x2qqml006sb63wync"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; + isomiRs = derive2 { name="isomiRs"; version="1.14.0"; sha256="0d1y5nnp3v57gl7n3r3p9k0zipci1vxp3zrz6cbc8624ff97nk8x"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics broom cluster cowplot DEGreport DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; }; + iterClust = derive2 { name="iterClust"; version="1.8.0"; sha256="0qalm8s4nmy75rqdrg20kr5zfvhncmwk2q167m8619iq4zgjwdbq"; depends=[Biobase cluster]; }; + iterativeBMA = derive2 { name="iterativeBMA"; version="1.44.0"; sha256="1nmb1yf2k3h0xqdlklqgpix2xcqsy4qb92xajmbfx80p7iga4rcr"; depends=[Biobase BMA leaps]; }; + iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.44.0"; sha256="1byb09b53l81n12vzfvjw9lk7fv8a6c7b6kzgv88ihpc3qj28vba"; depends=[BMA leaps survival]; }; + iteremoval = derive2 { name="iteremoval"; version="1.6.0"; sha256="178h5a2hdh63rahbq4w86xgxwkk9vsa5srin76qpfbiy40yiwawq"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; }; + ivygapSE = derive2 { name="ivygapSE"; version="1.8.0"; sha256="0wazpa0nbnw0cpin4v4m6v91czg0083bwd10as0g89slsvgqkh0c"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; }; + joda = derive2 { name="joda"; version="1.34.0"; sha256="0n6bcx29rnsc75zwgaj1wq0jg5pi40fcx9qrslabv827a7w77qad"; depends=[bgmm RBGL]; }; + karyoploteR = derive2 { name="karyoploteR"; version="1.12.4"; sha256="03jmfgmw35hrgn3pc5lq6pblzhfx9fp4l6dx50rp303lr7kjxp9v"; depends=[AnnotationDbi bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + kebabs = derive2 { name="kebabs"; version="1.20.0"; sha256="14a6bk0zqki8fhz47i2gkr0sgvd1dpi0bgxv5cyzph5ah62kjjxg"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; + keggorthology = derive2 { name="keggorthology"; version="2.38.0"; sha256="0g6s4fh48zvfvxg96x0k8163d9hpbpxcsmnijj5q4gv1v1bn6rhk"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; + kimod = derive2 { name="kimod"; version="1.14.0"; sha256="0sx68f74kc086q9np7559s0spawfn2adjx9cnpa1a0qca97z9xdq"; depends=[Biobase cluster]; }; + kissDE = derive2 { name="kissDE"; version="1.6.0"; sha256="179a416w3h6ssqsni32av0sqgz66hlv6akz7h4v9rp16ihfxxqvf"; depends=[aod Biobase DESeq2 doParallel DSS foreach ggplot2 gplots matrixStats]; }; + lapmix = derive2 { name="lapmix"; version="1.52.0"; sha256="1bd88mflk9djkq6n921hl9frxrlqxinsjyc798v3wym88y0s80yp"; depends=[Biobase]; }; + ldblock = derive2 { name="ldblock"; version="1.16.0"; sha256="0xpigfidmylfawy6vzshqnsw1lzjs4qms8q7zffij6bkvkv7920x"; depends=[BiocGenerics EnsDb_Hsapiens_v75 ensembldb GenomeInfoDb GenomicFiles httr Matrix Rsamtools snpStats VariantAnnotation]; }; + les = derive2 { name="les"; version="1.36.0"; sha256="12ykbc8nxagldz20rqwx58ixxkjx3w92mr78fmpnk61hl2980qbz"; depends=[boot fdrtool gplots RColorBrewer]; }; + levi = derive2 { name="levi"; version="1.4.0"; sha256="0d49wdbwdwgpvh4y2bw27b91x4hba426lxjsm1gfs030dxnbgz15"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 shiny shinydashboard shinyjs testthat xml2]; }; + lfa = derive2 { name="lfa"; version="1.16.0"; sha256="0cyb8gqxv2kx341z0xgmf0cipbhc0rwpk8a4pjy0qv7448swgw74"; depends=[corpcor]; }; + limma = derive2 { name="limma"; version="3.42.2"; sha256="1nd01r7rd7jb5qz84vbgfnyrmgm9wiq7fsdji68537kjgvrzmm9z"; depends=[]; }; + limmaGUI = derive2 { name="limmaGUI"; version="1.62.0"; sha256="1b3wxyl16mn5kp1v3wx5mrf8z03qh8pmy1k1nf9bcg2r21y5sqr9"; depends=[limma R2HTML tkrplot xtable]; }; + lionessR = derive2 { name="lionessR"; version="1.0.0"; sha256="1q64dmd0w9xlxcdizpjq8lfkfbr0vmqizrhc54rmlv35avk56z8f"; depends=[S4Vectors SummarizedExperiment]; }; + lipidr = derive2 { name="lipidr"; version="2.0.0"; sha256="1d87k9qg74rkqj299zil7aa8818b2m0a94711p0b84nsy2xlihgc"; depends=[data_table dplyr fgsea forcats ggplot2 limma magrittr rlang ropls S4Vectors SummarizedExperiment tidyr]; }; + lmdme = derive2 { name="lmdme"; version="1.28.0"; sha256="103p63srpc6nx5axmxi3rawxkfak7wvssbjkm8dwbm072c1spjk6"; depends=[limma pls stemHypoxia]; }; + loci2path = derive2 { name="loci2path"; version="1.6.0"; sha256="0r8znxqx8m8n6j70lv2fx271rvm0d2iyysnry2iczj3pfqg0qzy0"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; }; + logicFS = derive2 { name="logicFS"; version="2.6.0"; sha256="0a507w1n3h8b0lj2k3wci0li6j3z27wkfxswcfnj21gl8sd3fy7f"; depends=[LogicReg mcbiopi survival]; }; + logitT = derive2 { name="logitT"; version="1.44.0"; sha256="1pk2shrg5dkzhgh3l4ml2xkpfib52lcqcl0rqmic9slggmsidb9q"; depends=[affy]; }; + lol = derive2 { name="lol"; version="1.34.0"; sha256="0x03dnn12h61n19iy6cd3nrsqlsqwg56a5jwrhcc41rqr30fwil4"; depends=[Matrix penalized]; }; + lpNet = derive2 { name="lpNet"; version="2.18.0"; sha256="05d8shryk6p99lfpand58pvrsdw7afwx4lp9wpyikivnkbadp3s0"; depends=[lpSolve nem]; }; + lpsymphony = derive2 { name="lpsymphony"; version="1.14.0"; sha256="0j5j9kggh3l61vp6hpnqf45d5kzifksaj0sqhvs1zahmx2c1gfdv"; depends=[]; }; + lumi = derive2 { name="lumi"; version="2.38.0"; sha256="0lgrqbdvp7ykcafc0bpnbcsf396na3jj5c35x9ysf5bpcas23nmm"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; + mAPKL = derive2 { name="mAPKL"; version="1.16.0"; sha256="1dskvrwsjs1d12bpwil9mmx2xcnrf9hzpd45v6jg71vsc547a5xr"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; + mBPCR = derive2 { name="mBPCR"; version="1.40.0"; sha256="12iq2lr2gp9xh0kr2ipba5201bp47k5saja0fz577i77ww6v22lj"; depends=[Biobase oligoClasses SNPchip]; }; + mCSEA = derive2 { name="mCSEA"; version="1.6.0"; sha256="179pf50b0f1lh955rkzigrsrwnflhg1ny61vfp3yfbx133ljgrbk"; depends=[biomaRt fgsea GenomicFeatures GenomicRanges ggplot2 Gviz Homo_sapiens IRanges limma mCSEAdata S4Vectors SummarizedExperiment]; }; + maCorrPlot = derive2 { name="maCorrPlot"; version="1.56.0"; sha256="0n4svscf1gigaqzh1cpmpdsnw2krz3qn1ja9vaz6gpmkxqxyblrn"; depends=[lattice]; }; + maPredictDSC = derive2 { name="maPredictDSC"; version="1.24.0"; sha256="1zsp1n99rhbhkdnrdphnnpwwl1560anxsjmc7icdmhg2ddfg9cpw"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; + maSigPro = derive2 { name="maSigPro"; version="1.58.0"; sha256="1nk8lq6496xhlpafhhri8an7cmz8z1islmadpw11zrgim9vyq7hf"; depends=[Biobase MASS mclust venn]; }; + maanova = derive2 { name="maanova"; version="1.56.0"; sha256="1n6rx45252l7ya0hjsz5hdpna5kz3dqrlbc3lh1h2qx3bkl0myds"; depends=[Biobase]; }; + macat = derive2 { name="macat"; version="1.60.0"; sha256="0whl4l69i99q97v9mqa7n4kfpf560v57ggvw83wvcyqjarnhsqxx"; depends=[annotate Biobase]; }; + made4 = derive2 { name="made4"; version="1.60.0"; sha256="14zxx8g3r42rv2gix8im8kvm56irbivwqwdz347r1aj99r9m2k58"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; + maftools = derive2 { name="maftools"; version="2.2.10"; sha256="025yiy286qc1g39m1926ldb0lbfsc6c3dns7kc6b04m4v9ibd03d"; depends=[data_table RColorBrewer survival wordcloud]; }; + maigesPack = derive2 { name="maigesPack"; version="1.50.0"; sha256="10vn06v64lq4dnq89czl9szqd4395vzawaj0nfz0vzwm339g1sdh"; depends=[convert graph limma marray]; }; + makecdfenv = derive2 { name="makecdfenv"; version="1.62.0"; sha256="0bgcsic5anyb8fz25cgknq2z5jc0s1s01a8mf5vf2ks51q73wk93"; depends=[affy affyio Biobase zlibbioc]; }; + manta = derive2 { name="manta"; version="1.32.0"; sha256="19m3a5kbzgg6bfzw0avlzc4awby36ijl346i6xrzmaswwj0s2x21"; depends=[caroline edgeR Hmisc]; }; + mapscape = derive2 { name="mapscape"; version="1.10.0"; sha256="1f2znc70v648pmrcdsfdyvgpha1c7dbrp2pmmr0453qskjaripvw"; depends=[base64enc htmlwidgets jsonlite stringr]; }; + marray = derive2 { name="marray"; version="1.64.0"; sha256="1mbs9rk279hnm9yz34za3xz3hb88ll1d0abw4m2pgjgbh4kkhdrl"; depends=[limma]; }; + martini = derive2 { name="martini"; version="1.6.0"; sha256="0j0fj6s84j3295ysmp17f72j04g21nsd5jxv3vy20n6dnl2zbfac"; depends=[igraph Matrix Rcpp RcppEigen Rgin S4Vectors snpStats]; }; + maser = derive2 { name="maser"; version="1.4.0"; sha256="0fvd517qwbqaxvl4yp858z8ygy71yzx4av524sjk291xq8vfw5vy"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; }; + maskBAD = derive2 { name="maskBAD"; version="1.30.0"; sha256="0g5ivyb351xxl6ydzsckhvirns339m9ssj0w406lnpl2myr35d5m"; depends=[affy gcrma]; }; + massiR = derive2 { name="massiR"; version="1.22.0"; sha256="1zjrgqij5w6x9cc9pw01klwrphvbrxwc2760h27nm5x00kr3ag4i"; depends=[Biobase cluster diptest gplots]; }; + matchBox = derive2 { name="matchBox"; version="1.28.0"; sha256="1hsk5d8kcyl0sf1sm9fnfpqwy42ax2dr2zv73hzhqa1vgc276k1q"; depends=[]; }; + matter = derive2 { name="matter"; version="1.12.0"; sha256="0fj8fis97p1n1x2cg749rkd8zgsx5fh05qr3d0knjbrr4iyal6lb"; depends=[biglm BiocGenerics BiocParallel digest irlba ProtGenerics]; }; + mbkmeans = derive2 { name="mbkmeans"; version="1.2.0"; sha256="0a48imb0idsm27pmh2kliwfk9rrg46dngaw0fn1h4hyjc03sll9h"; depends=[beachmat benchmarkme ClusterR DelayedArray Matrix Rcpp RcppArmadillo Rhdf5lib SingleCellExperiment SummarizedExperiment]; }; + mcaGUI = derive2 { name="mcaGUI"; version="1.34.0"; sha256="1nch781pcsmbr4lbbkjcn3grjm4469mxy63zk2cmjg5x31jgjs99"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; }; + mdgsa = derive2 { name="mdgsa"; version="1.18.0"; sha256="0c5xza1mvgpi9cdl33s5iyal23az2jrkds01jh19asac71gjcqj4"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; + mdp = derive2 { name="mdp"; version="1.6.0"; sha256="0n999nxdmrym40wqvbybzlp11zpcsyq2d80d1195r7smsdqvlx3w"; depends=[ggplot2 gridExtra]; }; + mdqc = derive2 { name="mdqc"; version="1.48.0"; sha256="0lbk71qaqxiba0g9103s5pz33y2pzbq13ypjigx3vgxz6m8a55gr"; depends=[cluster MASS]; }; + meshes = derive2 { name="meshes"; version="1.12.0"; sha256="1s2gm9k117mwjd65xh5vr0bv0a0l2zsv1czcx2grfni8nk7fy8j0"; depends=[AnnotationDbi DOSE enrichplot GOSemSim MeSH_db rvcheck]; }; + meshr = derive2 { name="meshr"; version="1.22.0"; sha256="1d86ilhladx8qs6kgvj7p5a7ik49fl9sisccgl79yax8znwlkjmj"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db RSQLite S4Vectors]; }; + messina = derive2 { name="messina"; version="1.22.0"; sha256="1vygzmfw1zp34pazrn181q8xsil2i7dnfwcpqh99vcn4laayvj4f"; depends=[foreach ggplot2 plyr Rcpp survival]; }; + metaArray = derive2 { name="metaArray"; version="1.64.0"; sha256="133rghxihyvrqk9d3b1182gsai7m2p25nhxn1jp4a64b9kb71xwx"; depends=[Biobase MergeMaid]; }; + metaCCA = derive2 { name="metaCCA"; version="1.14.0"; sha256="1qiifrs8x6vw83d2cvy9rxr43rmkgflz7plziaf77ljmlmrnz7a9"; depends=[]; }; + metaMS = derive2 { name="metaMS"; version="1.22.0"; sha256="0ci8lwmk15fky3x2x195nqxkpb1f0azwki44i27hjclbyb8ncs8r"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; + metaSeq = derive2 { name="metaSeq"; version="1.26.0"; sha256="0w75fmmppgv48k4j8jjvhwpbqpk6cxj07j0q2j75pp37jskpw24w"; depends=[NOISeq Rcpp snow]; }; + metabomxtr = derive2 { name="metabomxtr"; version="1.20.0"; sha256="1vwad5q2bkgsvr9pm53fqr1vhqwgaahibm97xz57rik5f987x3kz"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; }; + metagene = derive2 { name="metagene"; version="2.18.0"; sha256="1fz4zq18cpylgzaiazf5c4xhmmmd9p3v00x9k8q017sb1jfhhar2"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; + metagene2 = derive2 { name="metagene2"; version="1.2.1"; sha256="11ix77hv0q8k3b3ski5ji6pwm4qc50b6hwnqw43xsrralj8w89kr"; depends=[BiocParallel data_table DBChIP dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr purrr R6 Rsamtools rtracklayer]; }; + metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="2.6.0"; sha256="1vlx4j566vdzq1q6lwh8j2njsijiz8zixbzc3i928ja6gdwsfn36"; depends=[ape Biobase Biostrings dbplyr DECIPHER dplyr lattice lazyeval magrittr RSQLite S4Vectors stringr]; }; + metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.28.2"; sha256="0nrnzmlkn3v5l30fg5x0apjq69hhjhh41f217q17dk5v4v78701y"; depends=[Biobase foreach glmnet gplots IHW limma Matrix matrixStats RColorBrewer Wrench]; }; + metahdep = derive2 { name="metahdep"; version="1.44.0"; sha256="0dpvjv1bji8086j7w0l5ylfls4y4sfwjaalkk2ixhhlqpmd1zah7"; depends=[]; }; + metaseqR = derive2 { name="metaseqR"; version="1.26.0"; sha256="07pjhg0cn6xchnci651k1jr89fygkxrwjv1ngfm1g3rvc0azp5ln"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; + metavizr = derive2 { name="metavizr"; version="1.10.0"; sha256="0xv5w133a7cnn35ym8i9b3jm1c3i741yvkblvrb20736yg05wjmz"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; }; + methInheritSim = derive2 { name="methInheritSim"; version="1.8.0"; sha256="1mrnd6d40ygzyf5si7vqm5ypm1989q3a3lvzhkxg4pzja6vd7m3q"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; + methVisual = derive2 { name="methVisual"; version="1.38.0"; sha256="0jk1jvhylcci8mkyy90hd7m44xm2wzgzp6rvprik6v61prk5d5zd"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; }; + methimpute = derive2 { name="methimpute"; version="1.8.0"; sha256="05rr9di0g296v2wvs8kry36xnhdllkbzd4vp7iync1f5b6csh52p"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; + methrix = derive2 { name="methrix"; version="1.0.05"; sha256="1b91bizp7a1mqkkapbhrxgrsnpjxw5598m212p95nzr739296k32"; depends=[BSgenome data_table DelayedArray DelayedMatrixStats ggplot2 HDF5Array matrixStats rjson SummarizedExperiment]; }; + methyAnalysis = derive2 { name="methyAnalysis"; version="1.28.0"; sha256="11k444c5kj8bpqav52bx738gaq81maj8mmiyb7dn5rwpfxjjpfpz"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; + methylCC = derive2 { name="methylCC"; version="1.0.0"; sha256="00rm9rh04bhwn92cczysgfckm6v5km0m3ipw0hngw837wnrxzja4"; depends=[Biobase bsseq bumphunter dplyr FlowSorted_Blood_450k genefilter GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges magrittr minfi plyranges quadprog S4Vectors]; }; + methylGSA = derive2 { name="methylGSA"; version="1.4.9"; sha256="0wfb7c9f6hy9s9bp9gcl5c1843xlmgp885iijk49shl3q5qrym6x"; depends=[AnnotationDbi BiocParallel clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg shiny stringr]; }; + methylInheritance = derive2 { name="methylInheritance"; version="1.10.0"; sha256="03h5gmz6pqqa3jfa2rx2wc9xc6lgim1879jy4v4dyciz05vzrmga"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; + methylKit = derive2 { name="methylKit"; version="1.12.0"; sha256="0klwc0sbmrxj1lxbz16pl39rxjm0pi57gjw547hlgnac1p9fspzy"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust mgcv qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; + methylMnM = derive2 { name="methylMnM"; version="1.24.0"; sha256="031k2jx0wm2gmfh794aa0yjlnap9dapw64a9l4v4a55yd9hbql9q"; depends=[edgeR statmod]; }; + methylPipe = derive2 { name="methylPipe"; version="1.20.0"; sha256="0g36fylp7j56n5m377cpnhhjk8lqhiyx3z1vr4hbgvn86adza2ra"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; + methylumi = derive2 { name="methylumi"; version="2.32.0"; sha256="0zd4h6n37v3z0mas69z2xsf5s0naih828987m8v0g9hhq4f6hf5w"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; + methyvim = derive2 { name="methyvim"; version="1.8.0"; sha256="13m1xkmgm5h3x1avfhrclszcwb507i0g4h4ns6zviqr3n1ksmxkj"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 ggsci gridExtra gtools IRanges limma minfi S4Vectors SummarizedExperiment superheat tmle]; }; + mfa = derive2 { name="mfa"; version="1.8.0"; sha256="08fm767hmic2qhwg3s8lmj2j325l31czj141z6fmpj6hb8l72dl5"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; + mgsa = derive2 { name="mgsa"; version="1.34.0"; sha256="0jg47jzbk83rkdjwag9ysn8fj88c7f969jwaivjsh0nily835zal"; depends=[gplots]; }; + miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.10.0"; sha256="04bmrybcb8p2v31815w3dykyqg4vxzsl6h1xsk9cjf5v1a2z35bs"; depends=[]; }; + miRLAB = derive2 { name="miRLAB"; version="1.16.0"; sha256="073h8c3680852vzvvymfggarwjz3m9vyy05l1mji6wnj7j85qisn"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots heatmap_plus Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl Roleswitch stringr SummarizedExperiment TCGAbiolinks]; }; + miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.14.0"; sha256="1idqw575gjzr4hlbcxphx6h5h80v3zclm89m05qvqrk6gcy9slnw"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; }; + miRNApath = derive2 { name="miRNApath"; version="1.46.0"; sha256="16qjp0a1mrnp3gqcbp0rzb298k5sphpz4ri6whs3ikgkmdy0bn6s"; depends=[]; }; + miRNAtap = derive2 { name="miRNAtap"; version="1.20.0"; sha256="1kgywyj39cvng8mc9s0cmi7aqnfb7zmjl9a2nxvfy99zyqq7jbrb"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; + miRSM = derive2 { name="miRSM"; version="1.4.1"; sha256="1sy0kj0sisady6hby814ggffc4izk8sp3hn45ifd7sfg4h1vkqy5"; depends=[BiBitR BicARE biclust Biobase dbscan dynamicTreeCut energy fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MatrixCorrelation MCL mclust miRspongeR NMF org_Hs_eg_db PMA ppclust Rcpp rqubic runibic s4vd SOMbrero subspace SummarizedExperiment WGCNA]; }; + miRcomp = derive2 { name="miRcomp"; version="1.16.0"; sha256="05riz927pvhyc1krvrnn5brbrj2k3dffs9rg8lzbgl7kaa85mvxc"; depends=[Biobase KernSmooth miRcompData]; }; + miRmine = derive2 { name="miRmine"; version="1.8.0"; sha256="1p4978miafirs5rk134vl1iyl08cizdj2rd2fp05kywhay9lay51"; depends=[SummarizedExperiment]; }; + miRspongeR = derive2 { name="miRspongeR"; version="1.12.0"; sha256="0hna616pp029ldlbprlcb3rfxn1xj2ngfvv7vg9yil85alayzyf5"; depends=[clusterProfiler corpcor DOSE igraph linkcomm MCL org_Hs_eg_db Rcpp ReactomePA survival varhandle]; }; + microRNA = derive2 { name="microRNA"; version="1.44.0"; sha256="0jf16ghbyfg15hc0ggck1ixsqa9vlnvr839z9qh37cw3drkcn5id"; depends=[Biostrings]; }; + microbiome = derive2 { name="microbiome"; version="1.8.0"; sha256="118yp0xy8hkdp4sb3da9yy95z6zkh3v6i91z35xyhrvi0rwwmvn1"; depends=[dplyr ggplot2 phyloseq reshape2 Rtsne scales tidyr vegan]; }; + microbiomeDASim = derive2 { name="microbiomeDASim"; version="1.0.0"; sha256="0vmvjdgd520gkaq82nc4mjx9sgfzdmrg5g7asj2r7x8g3fdn18ar"; depends=[ggplot2 MASS Matrix mvtnorm pbapply tmvtnorm]; }; + mimager = derive2 { name="mimager"; version="1.10.0"; sha256="01zylwqcl7z147h81xp115zv9nglp1s26nf3bk6lqivlz8bw1ylw"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; + minet = derive2 { name="minet"; version="3.44.1"; sha256="1ag9pj8mdr0dvi33jrhwx8vm03i5f0lcbs7lpndambkk6spj5pxk"; depends=[infotheo]; }; + minfi = derive2 { name="minfi"; version="1.32.0"; sha256="177isdvcq2476xybvfbh7x11qsj5nzckgh3b6p156wlx9ap9dvl3"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; + mirIntegrator = derive2 { name="mirIntegrator"; version="1.16.0"; sha256="0v5y7bh4p8x71pnwds31pwv5agdh6y0agrgilg7pr52gdi55gnv5"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; + missMethyl = derive2 { name="missMethyl"; version="1.20.4"; sha256="1qsdqrmvkdx66yx223nm6px07hx53wvmh13qdb6729dph8485c6j"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; + missRows = derive2 { name="missRows"; version="1.6.0"; sha256="13j65247xyf3ixnmz8zn5ndlf8xfpbfh2cxxb57v334kq639k8lx"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; }; + mitoODE = derive2 { name="mitoODE"; version="1.24.0"; sha256="18ikad7q651yqq8hl4ygh2jq4fdmsihvn9fnnlz93nvzkshl6ajf"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; + mixOmics = derive2 { name="mixOmics"; version="6.10.8"; sha256="0307vhx9ck24rxqbvq15815ssxcc226sl2la060n204b51wi9jaa"; depends=[corpcor dplyr ellipse ggplot2 gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; }; + mlm4omics = derive2 { name="mlm4omics"; version="1.3.0"; sha256="14wpxidl2g2zfphxa5j2f7w5vjbqrxzzjdlnjv5mcf67fia1n7nj"; depends=[BH ggplot2 MASS Matrix Rcpp RcppEigen rstan rstantools StanHeaders]; }; + mnem = derive2 { name="mnem"; version="1.2.0"; sha256="0q8f0gicr92m8jj9asl59plgw2pdpril7g3sz69x3dmi1sagfd5q"; depends=[cluster data_table epiNEM flexclust graph lattice Linnorm matrixStats naturalsort nem Rcpp RcppEigen Rgraphviz snowfall tsne]; }; + mogsa = derive2 { name="mogsa"; version="1.20.0"; sha256="0yyic7qz4pnlyp96xl8gm20rhv5snyhmzm4sjl3hxgkx5br3sjd7"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; + monocle = derive2 { name="monocle"; version="2.14.0"; sha256="18b9y592q48mbcp5w095qs1kaklq64v6dcnlpqhv3rwxvywygsz2"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; + mosaics = derive2 { name="mosaics"; version="2.24.0"; sha256="0zgi32bkakh0ysazfqh4w740cm8hjwzpdjdyw8dfip8m8r47s0lx"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; + motifRG = derive2 { name="motifRG"; version="1.30.0"; sha256="0s6wdr036lra9x93r9k8wvicbkgzypjh3jp46h92yacw8d829k0d"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; + motifStack = derive2 { name="motifStack"; version="1.30.0"; sha256="00rafqs1gqlcxlbsdn9qnq9xb7wjphiksb3hsx76viqjbjzi14wg"; depends=[ade4 Biostrings ggplot2 grImport2 htmlwidgets MotIV scales XML]; }; + motifbreakR = derive2 { name="motifbreakR"; version="2.0.0"; sha256="190z8gj393qdpq5wz7gph96k0l8c1j9wd0p0llscysvk5kr1hf9n"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr SummarizedExperiment TFMPvalue VariantAnnotation]; }; + motifcounter = derive2 { name="motifcounter"; version="1.10.0"; sha256="05knhki6w7yxrhf3gkh4wqj9yi11q60fd0c0qrxkplbhgd656r7z"; depends=[Biostrings]; }; + motifmatchr = derive2 { name="motifmatchr"; version="1.8.0"; sha256="1yvgaggx61rbrrspln2qf85lxqj1wg979mv1ya5xvjcv2qyw6s4z"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; }; + mpra = derive2 { name="mpra"; version="1.8.0"; sha256="1wflgcc9ns9mliz8f4xwvqkfx9qikb0am8skgp2wi96isyz4n0qc"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; }; + msPurity = derive2 { name="msPurity"; version="1.12.1"; sha256="05mg76bdpmyq4im3chx386glgqmipvvjpz1hk8l4rkzl4j4rbs63"; depends=[DBI dbplyr doSNOW dplyr fastcluster foreach ggplot2 jsonlite magrittr mzR plyr Rcpp reshape2 RSQLite stringr uuid]; }; + msa = derive2 { name="msa"; version="1.18.0"; sha256="0nd7kw6z4rkpsi3xwr7a3xivislgndj2xrad9rbppdz5a44yrjs4"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; + msgbsR = derive2 { name="msgbsR"; version="1.10.0"; sha256="1kjjhbyfjz6mx181slfcf4wb30d4qvyhvv26nhrxwkqdf83h0vn5"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; }; + msmsEDA = derive2 { name="msmsEDA"; version="1.24.0"; sha256="1g7j18i0qddasaqnmiw2qcswz8vm60acqqk628yh175kiczdlj0b"; depends=[gplots MASS MSnbase RColorBrewer]; }; + msmsTests = derive2 { name="msmsTests"; version="1.24.0"; sha256="1wn8nps8rd0fva48485pszlcs7hlvyid07lwr04hxjm9dm3m87gj"; depends=[edgeR msmsEDA MSnbase qvalue]; }; + multiClust = derive2 { name="multiClust"; version="1.16.0"; sha256="1c77c7mwvn7cb69r2frflafvqq1rd24k1xs99dj4axvg41yb69nn"; depends=[amap cluster ctc dendextend mclust survival]; }; + multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.4.0"; sha256="0sfx8m6p5rfvkzdhm15nzl6bajinx1gmgrglz95jbxljv8izqlzr"; depends=[BiocParallel BLMA data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare metap pbapply pheatmap qqman]; }; + multiMiR = derive2 { name="multiMiR"; version="1.8.0"; sha256="0f6ms2bzr58zjmhnv4zazxqmi1s42j5vf3qkfcgp80zb7vhfmd45"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; + multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.10.0"; sha256="0q1vcv8d9dwkibwgg3x304fr8qg1wljlbgwdb4zkgqlg2lcg288y"; depends=[doParallel foreach SummarizedExperiment]; }; + multiscan = derive2 { name="multiscan"; version="1.46.0"; sha256="0kf2byzpxdlcy74imh39zmn6w0gr3kk6qnaxv9qllpf60h4br4g4"; depends=[Biobase]; }; + multtest = derive2 { name="multtest"; version="2.42.0"; sha256="0qna9lx76ldsfy8qf5xmhl4ymqfkj29m1gdqhph06s470c8mwari"; depends=[Biobase BiocGenerics MASS survival]; }; + muscat = derive2 { name="muscat"; version="1.0.0"; sha256="1xxfy4jgil38xw55k8m3nnqwbpvb594jm0farm41n8slr14vgsvk"; depends=[BiocParallel blme ComplexHeatmap data_table DESeq2 doParallel dplyr edgeR ggplot2 glmmTMB limma lme4 lmerTest magrittr Matrix matrixStats progress purrr reshape2 S4Vectors scales scater sctransform SingleCellExperiment SummarizedExperiment tibble variancePartition viridis]; }; + muscle = derive2 { name="muscle"; version="3.28.0"; sha256="0rv3sh46fh4z6nvwf781418s6bjhibvib2x5z3mz965k61j8f4zh"; depends=[Biostrings]; }; + mygene = derive2 { name="mygene"; version="1.22.0"; sha256="1xc272zh23z5ajglbmlaj376b8ackh36nqyfjcym44xi6p5bw2mk"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; + myvariant = derive2 { name="myvariant"; version="1.16.0"; sha256="17a20ipyhq7s829jqgzrc09c9jmc1rqi77hfpjbv8hj9wfcqpsan"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; + mzID = derive2 { name="mzID"; version="1.24.0"; sha256="1glcv096bn6pxlw89dlij1nzpwnjvrbxysvw2gm6qgm7rhxlaxrw"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; + mzR = derive2 { name="mzR"; version="2.20.0"; sha256="1cwd7phlc5jbx6r6cznyfbdpvcin5fvsaasbbi65zn0s92a80r13"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib zlibbioc]; }; + nanotatoR = derive2 { name="nanotatoR"; version="1.2.0"; sha256="0754dnkwm89fy9i47kyfg0mmfn817n427l0jvgqbla17346xfdj3"; depends=[AnnotationDbi hash httr knitr openxlsx org_Hs_eg_db rentrez rtracklayer stringr testthat]; }; + ncGTW = derive2 { name="ncGTW"; version="1.0.0"; sha256="17sqc59ykgyylpnci2pv9xpny6fnl59mwid0d7lq0iwcvnvfqc9a"; depends=[BiocParallel Rcpp xcms]; }; + ncdfFlow = derive2 { name="ncdfFlow"; version="2.32.0"; sha256="06lscx6h4rg80ifi90rj7z2497b8w1fjipm3l8s3230rkizhh02i"; depends=[BH Biobase BiocGenerics flowCore Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; + ndexr = derive2 { name="ndexr"; version="1.8.0"; sha256="0hkkmizvdf89ilmsdf39g0dniwcgrw5fzy9g5161gz6vm8lb0kk1"; depends=[httr igraph jsonlite plyr tidyr]; }; + nem = derive2 { name="nem"; version="2.60.0"; sha256="11q1pf0qf7zsb14klz8inb7a4vbnq317v9kiqgaazb524xv49gf5"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; }; + netReg = derive2 { name="netReg"; version="1.10.0"; sha256="0pfl1g3plr2lv11a4x1vcczkdk1cha9g321q94lz5g8131sicc1q"; depends=[Rcpp RcppArmadillo]; }; + netSmooth = derive2 { name="netSmooth"; version="1.6.0"; sha256="06xssnln3j956gw94jirb3xmqvy1kx2bzls4hahz4410wa88130y"; depends=[cluster clusterExperiment data_table DelayedArray entropy HDF5Array Matrix scater SingleCellExperiment SummarizedExperiment]; }; + netbenchmark = derive2 { name="netbenchmark"; version="1.18.0"; sha256="1v23as3sk1qs7wvr9r5ck412ljfh0w7r0zwzggr4iph4f7sbg90d"; depends=[c3net corpcor fdrtool GeneNet GENIE3 grndata Matrix minet pracma Rcpp]; }; + netbiov = derive2 { name="netbiov"; version="1.20.0"; sha256="1w9ypgf9vr0sqvm9ahjmw97xnsfy5aps7svxvpdnj35hm0h32vdw"; depends=[igraph]; }; + netboost = derive2 { name="netboost"; version="1.2.2"; sha256="016pvgssgyablly2zym0a2m24a8z0a0sljg0krkf9znxyx3s34xy"; depends=[colorspace dynamicTreeCut impute R_utils Rcpp RcppParallel WGCNA]; }; + nethet = derive2 { name="nethet"; version="1.18.0"; sha256="0vblp9w3lyg9cdmgr7pacain7j3hwn3bblpkjy1bk0z0b37s39g5"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; }; + netprioR = derive2 { name="netprioR"; version="1.12.0"; sha256="01syisi6wyva4l5ysin7dk9yh4yadisp952v3nwb1jjkasnay7wr"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; + netresponse = derive2 { name="netresponse"; version="1.46.0"; sha256="0fkskjsrb36mig8jpv2vmzasmy4j9378hc81ihjkc732aa207ahv"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; + networkBMA = derive2 { name="networkBMA"; version="2.26.0"; sha256="0lblgfm3hj4mc018cxhqk5k2a2rifrs43rb68w7vb2xx300k0mw7"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; }; + ngsReports = derive2 { name="ngsReports"; version="1.2.0"; sha256="1kqydrjkra3sihds8cd4r7w4zzbdi6w8p3ir79g0nhk4bcai2mbv"; depends=[BiocGenerics Biostrings checkmate dplyr FactoMineR ggdendro ggplot2 kableExtra lubridate pander plotly readr reshape2 rmarkdown Rsamtools scales ShortRead stringr tibble tidyr tidyselect truncnorm viridisLite XVector zoo]; }; + nnNorm = derive2 { name="nnNorm"; version="2.50.0"; sha256="18zdvbpahqqvqzamhx4v4z3dinhxmsp7p37lzx7ps3j6287h43ll"; depends=[marray nnet]; }; + nondetects = derive2 { name="nondetects"; version="2.16.0"; sha256="1vyyjca4if446fsnjgv1cl3089fc7h1942l856xj6qwix87anshs"; depends=[arm Biobase HTqPCR limma mvtnorm]; }; + normalize450K = derive2 { name="normalize450K"; version="1.14.0"; sha256="1apld57pniq94qrq8sllg5krq67lh8y6asy5chshb7pakr4zps1s"; depends=[Biobase illuminaio quadprog]; }; + normr = derive2 { name="normr"; version="1.12.0"; sha256="1bi4kf2l3wp13mnf00c072l6anfswz2zcw7irb6nb337yl82i72s"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; + npGSEA = derive2 { name="npGSEA"; version="1.22.0"; sha256="1llygxq61lk2b9nk6cb829n3ggj5s1xvzi6bgb9bydlscvacgys9"; depends=[Biobase BiocGenerics GSEABase]; }; + nuCpos = derive2 { name="nuCpos"; version="1.4.0"; sha256="0d7bw60c3ch1rs6nsliq2rwcs7kfqcvads6fcs9hz4lg2wpf6ak6"; depends=[]; }; + nucleR = derive2 { name="nucleR"; version="2.18.4"; sha256="1rbvkfbn2zsxmyz223n56kkgywn36m80mpj38jn9gllfsciby76y"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; }; + nucleoSim = derive2 { name="nucleoSim"; version="1.14.0"; sha256="1jkv8kxy72ssh81sr14qghdn2dsaghvcn5wdmjhvzgwyq8xzr87q"; depends=[IRanges S4Vectors]; }; + occugene = derive2 { name="occugene"; version="1.46.0"; sha256="0g5hyqqzci486kmnlphr63whqn8xw7p9npqwfl20lnqi727ypz2l"; depends=[]; }; + odseq = derive2 { name="odseq"; version="1.14.0"; sha256="0lxl1hzjcjynxz2wkb25r47v7k9bw2zlr4xzz2iqn1y539gxnv73"; depends=[kebabs mclust msa]; }; + oligo = derive2 { name="oligo"; version="1.50.0"; sha256="01icfyy82f9k0m7ngrppz1ckq3wpq7zp6kgf8ppc55j6582c5jh3"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; + oligoClasses = derive2 { name="oligoClasses"; version="1.48.0"; sha256="02m1m3dkiyywalphw3i5n6y3bs8zp24xh59v9cz6jgjpah811skf"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; + omicRexposome = derive2 { name="omicRexposome"; version="1.8.0"; sha256="0xjsl9sm35d9rxn2dbd5bmikac4jdcpih6b81izcd8m4yklqa2ns"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; }; + omicade4 = derive2 { name="omicade4"; version="1.26.0"; sha256="1c0kfns2c4lfjq20f11ff8zzrvm8gzjpsylrrgrh4v77kk23rsp9"; depends=[ade4 made4]; }; + omicplotR = derive2 { name="omicplotR"; version="1.6.1"; sha256="0br13a908zy68vd9gs75ddsiczv2qf6ijksacfnp4y7wzdv1r6wv"; depends=[ALDEx2 compositions DT jsonlite knitr matrixStats rmarkdown shiny vegan zCompositions]; }; + omicsPrint = derive2 { name="omicsPrint"; version="1.6.0"; sha256="12mi0hmmg8srkb7p9bkqlxjxpdm4jhpirbk44zhgvwsax75sj02a"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; }; + oncomix = derive2 { name="oncomix"; version="1.8.0"; sha256="181sayzb6rp0mp80gnmc39mgxi2qwyanj19kfhbvn1b80ahx009s"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; }; + oneSENSE = derive2 { name="oneSENSE"; version="1.8.0"; sha256="15wi2xaj03p11knk4ixn2xnj06nnnxysr4ay663xrr2s40163wfh"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; + onlineFDR = derive2 { name="onlineFDR"; version="1.4.0"; sha256="0ym44nmz0357d5wpmkrb526fc7wylp1x3and8nfm8cx5pcmms8m4"; depends=[]; }; + ontoProc = derive2 { name="ontoProc"; version="1.8.1"; sha256="0hwayxivl6xkbklza8qn6kiyxn2ykqvh5ixm75m7vphsrql8kd42"; depends=[AnnotationDbi Biobase dplyr graph magrittr ontologyIndex ontologyPlot Rgraphviz S4Vectors shiny]; }; + openCyto = derive2 { name="openCyto"; version="1.24.0"; sha256="0h25nhvq1zq624wsgb55wjcgri9rcd2fnqkb31h9jdakr01dw2sb"; depends=[Biobase BiocGenerics clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; + openPrimeR = derive2 { name="openPrimeR"; version="1.8.0"; sha256="0xc5l1pkvzjx089ci60gmakc63yvh9jy5dm6qnyx9xn1p84b8q18"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr tinytex uniqtag XML]; }; + openPrimeRui = derive2 { name="openPrimeRui"; version="1.8.0"; sha256="1453zwcccm189kymdsyk43apy0absk98zsa8732vbz0g4wipl1jz"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; + oposSOM = derive2 { name="oposSOM"; version="2.4.0"; sha256="0pcwxr474az7ckxzvq2gw4pbcvd5jrl441hi8zf2d83iyaj4ym27"; depends=[ape Biobase biomaRt fastICA fdrtool igraph pixmap Rcpp RcppParallel scatterplot3d tsne]; }; + oppar = derive2 { name="oppar"; version="1.14.0"; sha256="0jmxvi2j654xqsvy7kdf20rj728gfspp5lvfnhglca73iy10alhk"; depends=[Biobase GSEABase GSVA]; }; + oppti = derive2 { name="oppti"; version="1.0.0"; sha256="147iikac07i7xb9y3qisc7nl3c674v6pdvv8yksxi4nd8g2yj96j"; depends=[devtools ggplot2 knitr limma pheatmap RColorBrewer reshape]; }; + pRoloc = derive2 { name="pRoloc"; version="1.26.0"; sha256="0k4cbx486vpxs88ljq51h1p2z3x4lll37h9isi08cajkpfbnxzdg"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; + pRolocGUI = derive2 { name="pRolocGUI"; version="1.20.0"; sha256="1f15wl5r71rclb8d5m3w5l1vvcrgky04q45jjmhd9076clkwdvyi"; depends=[Biobase dplyr DT ggplot2 MSnbase pRoloc scales shiny]; }; + paircompviz = derive2 { name="paircompviz"; version="1.24.0"; sha256="1ygrcpy39661dll83fs8hfb1akyzk2mnnr6lh9yyizn848sbpnga"; depends=[Rgraphviz]; }; + pandaR = derive2 { name="pandaR"; version="1.18.0"; sha256="1immn3vgqzxahh5m3sb0lkyszqnf7vgdqkfi0jxkb49ck7p7mn7d"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; + panelcn_mops = derive2 { name="panelcn.mops"; version="1.8.0"; sha256="1xi893chr0v7r2v3f57i61xzmvvx56xzil4q4yrvbpj24hg57nm9"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + panp = derive2 { name="panp"; version="1.56.0"; sha256="07xa5smdjwzyz547lr4h4fl01frjfla4386gslwrxc8y5p7k96vv"; depends=[affy Biobase]; }; + parglms = derive2 { name="parglms"; version="1.18.0"; sha256="1i82sjb5g6fhn6pysg25l2ac47798y3134mbry1vr34vc2r87sq7"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; + parody = derive2 { name="parody"; version="1.44.0"; sha256="1zb0ysp31b1j40j452dsjq0kkwi1prvz3ms0dm8qwgpysd2piwfi"; depends=[]; }; + pathRender = derive2 { name="pathRender"; version="1.54.0"; sha256="07vl6bq0d2dpkin1q5ghz644fbvz6gpi7ry1lmq44dw1z2fap3q6"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; + pathVar = derive2 { name="pathVar"; version="1.16.0"; sha256="14ngfscsa5pxs55chs51d252z909v3yjm0ra0q0zsfziwan2w6fn"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; + pathifier = derive2 { name="pathifier"; version="1.24.0"; sha256="1yp0b749ji3rh0dbag0zpw97al7ckbqx023fih72z2hhddpayr3v"; depends=[princurve R_oo]; }; + pathprint = derive2 { name="pathprint"; version="1.16.0"; sha256="1kff31wiyx0mqlqlkamy4q0g1s6ww6j5hjj9z8xncsfp58gll4yp"; depends=[]; }; + pathview = derive2 { name="pathview"; version="1.26.0"; sha256="1df54hf8ihdh80clpxk5mzdvz5jwvlhx4whrp7pg9wm3rg1n2a4s"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; + pathwayPCA = derive2 { name="pathwayPCA"; version="1.2.0"; sha256="1scm2vq2vwj7d0dn1g8976r6aya121jl51591gpa7hqzyfndc4js"; depends=[lars survival]; }; + paxtoolsr = derive2 { name="paxtoolsr"; version="1.20.0"; sha256="1fwbkanm28vi4lssgxcxy12xsadspp2lgs9ilf2v45l0cj85gq4l"; depends=[httr igraph jsonlite plyr R_utils readr rJava rjson XML]; }; + pcaExplorer = derive2 { name="pcaExplorer"; version="2.12.0"; sha256="1s7nw7iw4i5gy5cwagvby8810jk1b8a616jf8j6f6yrl460kkmig"; depends=[AnnotationDbi base64enc biomaRt d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges knitr limma NMF pheatmap plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; + pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.30.0"; sha256="0cj7aqi8pdm5xqgx0v2g8nwjl944kgnpywjdvqbj2pc1i9wi87c2"; depends=[AnnotationDbi Biostrings ellipse]; }; + pcaMethods = derive2 { name="pcaMethods"; version="1.78.0"; sha256="1wir67kfjm0m9gf0ki8qmvh45n4gx2k0wfl9pd1hp4g62fbrj1pj"; depends=[Biobase BiocGenerics MASS Rcpp]; }; + pcot2 = derive2 { name="pcot2"; version="1.54.0"; sha256="056zpd8r870sn9ar9ckm6xhw760bgpsyk8xqplf8g2vf3wssbsg4"; depends=[amap Biobase]; }; + pcxn = derive2 { name="pcxn"; version="2.8.0"; sha256="1rq6g0rdfm0nglyfp30yczqrwfsaakyx17dpm13yf1rhdj070jhi"; depends=[pcxnData pheatmap]; }; + pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.50.0"; sha256="18zk2n40kn472p3k05kzwqfv4k8ia12pvn76hipkbavzbq4sr86j"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + peakPantheR = derive2 { name="peakPantheR"; version="1.0.0"; sha256="00qq596ggl9bgxpkl091s95k4fxi0qff5n74f3c0qi40vs2ln80b"; depends=[doParallel foreach ggplot2 gridExtra minpack_lm MSnbase mzR scales stringr XML]; }; + pepStat = derive2 { name="pepStat"; version="1.20.0"; sha256="179kaw9js96i3gsx5msqg4s20zfb6q5iva2cqgw0dnv0dzrvrzxg"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; + pepXMLTab = derive2 { name="pepXMLTab"; version="1.20.0"; sha256="08mbcvlfg9rx9z37q8ral9vi97r9fxcpajd8axnqd3rgzzdbihif"; depends=[XML]; }; + perturbatr = derive2 { name="perturbatr"; version="1.6.0"; sha256="1rmcqyh3773p1fmq9yshzkyd5nf309nkcpsy2y09i5in0xjhap2q"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; }; + pgca = derive2 { name="pgca"; version="1.10.0"; sha256="041476hq4c6vn7rpmwf3jsis3i9ql001rhl3cvyl9v1xl08qyyzy"; depends=[]; }; + phantasus = derive2 { name="phantasus"; version="1.6.0"; sha256="0av1an61zcg7w79sygwynb9lfxyls52ps7c1vcnf99xlwww8vs5g"; depends=[AnnotationDbi assertthat Biobase ccaPP fgsea GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix Matrix_utils opencpu pheatmap protolite rhdf5 Rook scales stringr svglite]; }; + phemd = derive2 { name="phemd"; version="1.1.1"; sha256="0vplb6x91p51idb7xpvvcpb2zbn29r0cign2vdhl5vrqi2162kk4"; depends=[Biobase BiocGenerics cluster cowplot destiny ggplot2 igraph maptree monocle pheatmap pracma RANN RColorBrewer Rtsne S4Vectors scatterplot3d Seurat SingleCellExperiment SummarizedExperiment transport VGAM]; }; + phenoTest = derive2 { name="phenoTest"; version="1.34.0"; sha256="0ri3z95bl9bn5rgxysy2q0b3zk5j3sv2nggmdn58abz8hk1rjr7s"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; }; + phenopath = derive2 { name="phenopath"; version="1.10.0"; sha256="0x3ibb3pxkhi5y6zyfi68m2csy36946nwq1gmm5bxygbphpwcdcb"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; }; + philr = derive2 { name="philr"; version="1.12.0"; sha256="0l1krm78ywmphvlif3k3wxh2ymlgdkjxww23vj2ggpz5dkhdk83d"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; + phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.10.0"; sha256="11r7hm2lbbx51qsw4v0sxkczy22x4qmsyw34admnvqbyshza9hzv"; depends=[matrixStats plyr]; }; + phyloseq = derive2 { name="phyloseq"; version="1.30.0"; sha256="07b7g3dx7mpp2jjys3r9l7fwlabjdk8vbgv33zhrlip2vix95s9w"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; + piano = derive2 { name="piano"; version="2.2.0"; sha256="1f1nlibsnkgnklalw2fbgjm6dzbbni1l0cp25zh073dklhkigzd3"; depends=[Biobase BiocGenerics DT fgsea gplots htmlwidgets igraph marray relations scales shiny shinydashboard shinyjs visNetwork]; }; + pickgene = derive2 { name="pickgene"; version="1.58.0"; sha256="07mw40qg7x4zzjrh7mxr5za234biddqh6xsxa8z2lbzkkcwcrk61"; depends=[MASS]; }; + pint = derive2 { name="pint"; version="1.36.0"; sha256="0dr74z7wbygjzxy6hsc88zms98s1kf0jn36s3w35xb2jki1pmq4g"; depends=[dmt Matrix mvtnorm]; }; + pipeFrame = derive2 { name="pipeFrame"; version="1.2.2"; sha256="0cdqc61cawa7ar9yvspnahmswdb57b0gh2syaj3mxk5lm9c5mwyy"; depends=[Biostrings BSgenome digest GenomeInfoDb magrittr visNetwork]; }; + pkgDepTools = derive2 { name="pkgDepTools"; version="1.52.0"; sha256="11jh69yvzsm1jacj63c0pgw26gmbgbpmnkmgyc12r8drcsxyhji2"; depends=[graph RBGL]; }; + plethy = derive2 { name="plethy"; version="1.24.0"; sha256="1rqh20ymri7806rq9m6nn2ca30jzrx7a8sbggxsp54hmha0k6ill"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; + plgem = derive2 { name="plgem"; version="1.58.0"; sha256="0fkyvcw2qxp4g527s9rzia45yapi0r6gbij7svisil8rbgfdp45v"; depends=[Biobase MASS]; }; + plier = derive2 { name="plier"; version="1.56.0"; sha256="18jqnmv1zwig6md430adgin9hsg67vxlmnmvjlfcx3i81hymx33n"; depends=[affy Biobase]; }; + plotGrouper = derive2 { name="plotGrouper"; version="1.4.0"; sha256="0a34ijxxfa4648xcm4c9jxncsaj5qh2l035cjfv7xzd9wk02aprm"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; }; + plrs = derive2 { name="plrs"; version="1.26.0"; sha256="0gcv9ld5jhi9abanw0layy5c03fvg83xww3bjar9w83bq1hysd2c"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; }; + plw = derive2 { name="plw"; version="1.46.0"; sha256="040vhc75dprnnazjryrzndvxi4i33yfd97k3pmr3mk7h21x68wpf"; depends=[affy MASS]; }; + plyranges = derive2 { name="plyranges"; version="1.6.10"; sha256="1bmwjzc0y98xd8rf3lwgh9vf456cssw4nd6yvxm47dpnbshmkm0n"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyselect]; }; + pmm = derive2 { name="pmm"; version="1.18.0"; sha256="1fy90inxiqyr8szxamz33rkd5hh2qi9bmkb8z6jgip8pwj8vs0zb"; depends=[lme4]; }; + podkat = derive2 { name="podkat"; version="1.18.0"; sha256="0qfcl6gyv063q8bk2w44ga5234yi3m2bhhcabdwsq8gq2kxiwn6n"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rhtslib Rsamtools]; }; + pogos = derive2 { name="pogos"; version="1.6.0"; sha256="0mwcwcr5pz2s4x0jgsyynm1fqmnys78z0zq6l8ngdi51xj2216qn"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; }; + polyester = derive2 { name="polyester"; version="1.22.0"; sha256="1jrq9qlr1jswz20xfnipzawva7mn2czwpn2q4nabv1mhhmlf0mwm"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; + powerTCR = derive2 { name="powerTCR"; version="1.6.0"; sha256="0g6sy7b6igb9q1yfsfbk0g47k7zwk7bqx0gckmf5jbnc3sp4kyn6"; depends=[cubature doParallel evmix foreach magrittr purrr tcR truncdist vegan VGAM]; }; + ppiStats = derive2 { name="ppiStats"; version="1.52.0"; sha256="0a9lds7j5qdcmmwy9qdb364gqrfc0gb78la693l9mkml4rnz4j8q"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; + pqsfinder = derive2 { name="pqsfinder"; version="2.2.0"; sha256="1y2wlzw7wi5kbmvmf1imzy0car65g4irvaiz4x601wvxxyzqy74s"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; + prada = derive2 { name="prada"; version="1.62.0"; sha256="1c614ciqkqj95xzvr8z5lkvdw6xiw795fnqk900ly8g2kkfkg1kz"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; }; + pram = derive2 { name="pram"; version="1.2.0"; sha256="0hdzjqx4d8mgf1vwp6a5gmjncgvr64mgv4lf8q98v9rk1rrnbzwa"; depends=[BiocGenerics BiocParallel data_table GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; + prebs = derive2 { name="prebs"; version="1.26.0"; sha256="0fqg3adgzjizzqx03r0h43ic6v8fs953v1h942h9hiw6r1q5hnxg"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; + predictionet = derive2 { name="predictionet"; version="1.32.0"; sha256="0m6lrcd0bckk0wic8pnqi4sc83jk9l65dgyfd62hg42wx9292wxv"; depends=[catnet igraph MASS penalized RBGL]; }; + preprocessCore = derive2 { name="preprocessCore"; version="1.48.0"; sha256="0zrb9hx60vppkg0priczdb301nhq5f0dj8lkc8rcc4xrqqr915qm"; depends=[]; }; + primirTSS = derive2 { name="primirTSS"; version="1.4.0"; sha256="08hwq0yn5lnccdvj67cpqa12na4fx25gpk8vcvymi0icqpx9ga5p"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; }; + proBAMr = derive2 { name="proBAMr"; version="1.20.0"; sha256="06aifq4lbq2fvwgshnr3jazqqh000rapypd2cl4sqf267nfyqrvi"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; + proBatch = derive2 { name="proBatch"; version="1.2.0"; sha256="1hlcs4faqx8z9f72fdy9hfnk2c2jv4rnb8zvv2j6gj027pwy8jgl"; depends=[Biobase corrplot data_table dplyr ggfortify ggplot2 lazyeval lubridate magrittr pheatmap preprocessCore purrr pvca RColorBrewer reshape2 rlang scales sva tibble tidyr viridis wesanderson WGCNA]; }; + proDA = derive2 { name="proDA"; version="1.0.0"; sha256="1l6baxhiybxzddhk1dks46hmrich6bw2nyzsbid3byh5rkf6msxc"; depends=[BiocGenerics extraDistr S4Vectors SummarizedExperiment]; }; + proFIA = derive2 { name="proFIA"; version="1.12.0"; sha256="1p0kgapd5fmgaz537chj8ymyxp9vg8wdfc5vf8l09f0xjfm2cahm"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; }; + procoil = derive2 { name="procoil"; version="2.14.0"; sha256="1pmv2z2pvj996yc8d8988bfzqf4qqk5ap5grh21fsfjvhiry87hx"; depends=[Biostrings kebabs S4Vectors]; }; + profileScoreDist = derive2 { name="profileScoreDist"; version="1.14.0"; sha256="01nqbx5szvfl7pkpfx8kqfvp3pr3g5lkscr2mxd3fm0z2lmzc6g6"; depends=[BiocGenerics Rcpp]; }; + profileplyr = derive2 { name="profileplyr"; version="1.2.0"; sha256="0f9rc8shz5pxlga8wbgsj3d8lfhyckvlpm9l9hi8imr0zkkrhsrn"; depends=[BiocGenerics BiocParallel ChIPseeker circlize ComplexHeatmap dplyr EnrichedHeatmap GenomeInfoDb GenomicFeatures GenomicRanges IRanges magrittr org_Hs_eg_db org_Mm_eg_db pheatmap R_utils rGREAT rjson rtracklayer S4Vectors soGGi SummarizedExperiment tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + progeny = derive2 { name="progeny"; version="1.8.0"; sha256="0j3kxjj7xmmwb29p87n3bw7bl38gcb94jrpw32126a578rf1pfrq"; depends=[Biobase]; }; + projectR = derive2 { name="projectR"; version="1.2.0"; sha256="15jkninksmy92f1rw9mi9c4cdlqcc0cwpqrq46zrgpbcfsfbqc9r"; depends=[cluster CoGAPS limma NMF ROCR]; }; + proteinProfiles = derive2 { name="proteinProfiles"; version="1.26.0"; sha256="0qcl4270prwa5cgg9c3i4nlbw5kz7qi6cc1yizjdvk4wmbxcr736"; depends=[]; }; + proteoQC = derive2 { name="proteoQC"; version="1.21.0"; sha256="0jkadb255qgjy131w1zkmznxwj1hpx95v8qhq3cc27krgdv6nnd3"; depends=[dplyr ggplot2 MSnbase Nozzle_R1 plotly plyr reshape2 rmarkdown rpx rTANDEM seqinr tidyr VennDiagram XML]; }; + psichomics = derive2 { name="psichomics"; version="1.12.1"; sha256="12l8lap1zgdn1qr75x9msjymys67aab7jy79dazjs061zqk2mac4"; depends=[AnnotationDbi AnnotationHub BiocFileCache cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma miscTools org_Hs_eg_db pairsD3 plyr R_utils Rcpp recount reshape2 shiny shinyBS shinyjs stringr SummarizedExperiment survival XML xtable]; }; + psygenet2r = derive2 { name="psygenet2r"; version="1.18.0"; sha256="1ivybrwm1a3clnwkby10300707sy33llyka989id7s1p3l5amjgv"; depends=[BgeeDB Biobase BiocManager biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; + pulsedSilac = derive2 { name="pulsedSilac"; version="1.0.1"; sha256="1xjmqjx2z0cyijqnky68xcckk0rzbfsgwzizymby4lygwqkf0k6c"; depends=[cowplot ggplot2 ggridges MuMIn R_utils robustbase S4Vectors SummarizedExperiment taRifx UpSetR]; }; + puma = derive2 { name="puma"; version="3.28.0"; sha256="1fhv9dbfzwlhpg8k3hm7iml81fqcq6c33dx5ya3a94hvzmyavxay"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; + pvac = derive2 { name="pvac"; version="1.34.0"; sha256="04vn3dm3ld46xz7q14svc5wcj5i23dr6dvwx1iyyhs984ya4d1ym"; depends=[affy Biobase]; }; + pvca = derive2 { name="pvca"; version="1.26.0"; sha256="1n7fv8ia96zdfpm9ca5ibmps3i4b4rmp7bghk4d6rzfjsid9xvl8"; depends=[Biobase lme4 Matrix vsn]; }; + pwOmics = derive2 { name="pwOmics"; version="1.18.0"; sha256="0nds20c0z4jj6x53mpvr3h3nqlmgsb9lq5dw2afwla1cfxp2lsyk"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; }; + pwrEWAS = derive2 { name="pwrEWAS"; version="1.0.0"; sha256="0xm9b9nv3iy27gb4nvg17pk92dgg7ifihrsc8sjbds21nnqxyc87"; depends=[abind BiocManager CpGassoc doParallel doSNOW foreach genefilter ggplot2 limma pwrEWAS_data shiny shinyBS shinyWidgets truncnorm]; }; + qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="1.4.0"; sha256="0rjks6gknwbyqngbi37c4gfi4kniwsyl1jarc5wyfiy7d0vsbzqg"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr GenomicRanges ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer statmod stringr tibble tidyr]; }; + qckitfastq = derive2 { name="qckitfastq"; version="1.2.0"; sha256="1h6yvyn8c099p1wx67skx4rhrr562z4gbd4y3f4mrjnicwb9vi9q"; depends=[data_table dplyr ggplot2 magrittr Rcpp reshape2 rlang RSeqAn seqTools zlibbioc]; }; + qcmetrics = derive2 { name="qcmetrics"; version="1.24.0"; sha256="0l1kx9ndfryvbxx1b2i5rkqznv6f5iwanbhdiy5zjpg92ij86qhc"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; + qpcrNorm = derive2 { name="qpcrNorm"; version="1.44.0"; sha256="0zxz39c3ki8x1dgk7pji1xrk4nbax3b9mqwwm41ql3xgmbv4p36v"; depends=[affy Biobase limma]; }; + qpgraph = derive2 { name="qpgraph"; version="2.20.0"; sha256="1s8gcvw3bgavdnvazxxc3kp874ypiyk5xdjpj2hfkm4ahcfqq490"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; + qrqc = derive2 { name="qrqc"; version="1.40.0"; sha256="095nig1qj31hl07ix909lxq1pgypfzb8qizizvj1px41dcd7l9hr"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rhtslib testthat xtable]; }; + qsea = derive2 { name="qsea"; version="1.12.0"; sha256="14375h5pljdfc0y74zaz2phjn8zn2im1rjln2794d812yh2a4hk6"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; }; + qsmooth = derive2 { name="qsmooth"; version="1.2.0"; sha256="05mir3p0yf1sn40p4s1q3s971igfg581if0w4cqg83rvg6m8ygi8"; depends=[SummarizedExperiment sva]; }; + quantro = derive2 { name="quantro"; version="1.20.0"; sha256="09f3x1j50ll5hhn3qwys5x06mii3fqsrk6dkvsxai0kdxv9cjz9m"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; + quantsmooth = derive2 { name="quantsmooth"; version="1.52.0"; sha256="12x0aavwaglf9c2w3s0j128q2hjj3mx98xl4ss803msm6zi54k4c"; depends=[quantreg]; }; + qusage = derive2 { name="qusage"; version="2.20.0"; sha256="0ffk6bwd6c9lkya9hzhjv8cn6sqg4kzclgxrf9985wiifarn6d64"; depends=[Biobase emmeans limma nlme]; }; + qvalue = derive2 { name="qvalue"; version="2.18.0"; sha256="0njnidyncm3g3712mnp77cs4kghn596ss1pz6fhp1cr0wxcayp6j"; depends=[ggplot2 reshape2]; }; + r3Cseq = derive2 { name="r3Cseq"; version="1.32.0"; sha256="0bdhfn9j7n6q3ml3vxp89xqb142v4j5lrmriif523lx8dfin4nnd"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; + rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.26.0"; sha256="0dr160pnq4ypvq20mxd4q8q1gzdgdh3gkqd6pma6zqf6nfp863hj"; depends=[data_table XML]; }; + rCGH = derive2 { name="rCGH"; version="1.16.0"; sha256="0wxrzb6vj83kan5flj92ajpldzkb5mdr0w62xz2n4wqc1ln37brv"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + rDGIdb = derive2 { name="rDGIdb"; version="1.12.0"; sha256="1z6gkm7qr7sijaxx02lbwbl1avcz5xcigbscvk9lq6haq6s9mvxj"; depends=[httr jsonlite]; }; + rGADEM = derive2 { name="rGADEM"; version="2.34.1"; sha256="12xm4p4qsczf57kip8bvi6pr8sb5gvn11dnbz7lbh6sc03sx3q2h"; depends=[Biostrings BSgenome GenomicRanges IRanges seqLogo]; }; + rGREAT = derive2 { name="rGREAT"; version="1.18.0"; sha256="0ffc2a409amsnf82vfgdp17sgqg1rmlj598p9bgb9k6hrrbw464b"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; + rRDP = derive2 { name="rRDP"; version="1.20.0"; sha256="04zpnsss602ix8vhhwbymip3z7rqi88vxa1gq8754m58djcy92fh"; depends=[Biostrings]; }; + rScudo = derive2 { name="rScudo"; version="1.2.0"; sha256="0xn608lan6c2as7mc0pc90c45b63q14y5cbrriv23vj7bcgr8fwp"; depends=[Biobase BiocGenerics igraph S4Vectors stringr SummarizedExperiment]; }; + rTANDEM = derive2 { name="rTANDEM"; version="1.26.0"; sha256="0m260a0b05k1mx4r4hh7y7gzw9647b64f7564vzk3vznq248n43p"; depends=[data_table Rcpp XML]; }; + rTRM = derive2 { name="rTRM"; version="1.24.0"; sha256="1g2ifckx1jqnizfn9xd55xxjn772xz8vfx10bspg3wplp2w00qah"; depends=[AnnotationDbi DBI igraph RSQLite]; }; + rTRMui = derive2 { name="rTRMui"; version="1.24.0"; sha256="03i21djhcdm8c4wmf83cblxrb2f035jff3vgxi31abcfbf2advvi"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; + rWikiPathways = derive2 { name="rWikiPathways"; version="1.6.1"; sha256="17zy066j7ga5k4s22fxqibzssi43hsd879zvlsd0gz45np4l0l3v"; depends=[caTools httr rjson XML]; }; + rain = derive2 { name="rain"; version="1.20.0"; sha256="17z5dkvv7p568ga0m5rcjp0f5bxzrm14hf93z36l71r09d2p58f7"; depends=[gmp multtest]; }; + rama = derive2 { name="rama"; version="1.60.0"; sha256="0vyl2yz1j0ah78wqapvzfk9cr1fsphdpcql6jma66iyjzbqqqvk3"; depends=[]; }; + ramwas = derive2 { name="ramwas"; version="1.10.5"; sha256="0ly1yccf4qgxkcdgm2pjr8fnz969v9ms74jzy08zji0242vh6rky"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; + randPack = derive2 { name="randPack"; version="1.32.0"; sha256="04dvvsqgj6rw02a949v0gy8a5as56ay1wadvhph9c80g0xkac0pp"; depends=[Biobase]; }; + rbsurv = derive2 { name="rbsurv"; version="2.44.0"; sha256="1ia4bkg3c67h858qcx079kfx9ry8nj96w5ycnyahk19y7sqdz3k8"; depends=[Biobase survival]; }; + rcellminer = derive2 { name="rcellminer"; version="2.8.0"; sha256="0nfrkrk523idf16i2qa588ak494ffiw9aqh2zha661wwf4pv991h"; depends=[Biobase fingerprint ggplot2 gplots rcdk rcellminerData shiny stringr]; }; + readat = derive2 { name="readat"; version="1.11.0"; sha256="1x649yqwcqwqy0r991h98pkrw6a17jswicj039jcxxz35qlxbxyk"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_sets assertive_types Biobase data_table dplyr magrittr openxlsx reshape2 stringi SummarizedExperiment testthat tidyr]; }; + reb = derive2 { name="reb"; version="1.64.0"; sha256="0w45c6bs2r3s77bm21ziqc9brs4cwag515m0ggqi835f0dszwa6s"; depends=[Biobase idiogram]; }; + recount = derive2 { name="recount"; version="1.12.1"; sha256="0w1ia3qcvj6r4mjz6nqqm51iy7sp7ybjycyc736brgcxpfa85cxs"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; + recoup = derive2 { name="recoup"; version="1.14.0"; sha256="16x027v5knylbv9p724sp5k7p37y01n0l1n5458zfhf5dvdic4zy"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; }; + regionReport = derive2 { name="regionReport"; version="1.20.0"; sha256="0g1phm4crgg4jijqfnl4vhla5hi0awqsvf9s3amg8rbia4lpzaxb"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; + regioneR = derive2 { name="regioneR"; version="1.18.1"; sha256="0if7r6njz3ahm545383z5mzmzw8fdvw80a9lfz160j5pcgpx2dq9"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; + regsplice = derive2 { name="regsplice"; version="1.12.6"; sha256="06znb21lwx9y6a9yfbs29yagsww6d43avc7r90n46ifwrhxzmvn4"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; + restfulSE = derive2 { name="restfulSE"; version="1.8.0"; sha256="1dhxw93xya0x612zjhgz7szpcmzh677whvg076g9a597v02ggz2l"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; }; + rexposome = derive2 { name="rexposome"; version="1.8.0"; sha256="13d0fr9m8v84c40mh55mzsl6las1k6fq8i1f0fh2ay3r6amarj4i"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; }; + rfPred = derive2 { name="rfPred"; version="1.24.0"; sha256="0vbx7avsn20jk0pccrh9ymg4ihs1lwf1s22rbimz98zzxsvnjr1b"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; + rgsepd = derive2 { name="rgsepd"; version="1.18.0"; sha256="0s2bi5g2nh431sjcll8gpxvj5cnylr103fdj0s125a8j30g6218i"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; + rhdf5 = derive2 { name="rhdf5"; version="2.30.1"; sha256="18pv74jj4wr1981r92ss10qkgf5g1b09dsbz3im3j70a4l5l0df0"; depends=[Rhdf5lib]; }; + rhdf5client = derive2 { name="rhdf5client"; version="1.8.0"; sha256="00b62nsmipmx55xl6xcfay9ip123ml6s84r84m9wbwszivq7j891"; depends=[DelayedArray httr R6 rjson S4Vectors]; }; + riboSeqR = derive2 { name="riboSeqR"; version="1.20.0"; sha256="1jr7h64hyhyf9gf15lah6iqwyljfc8mraf9kya4lql6lcjjkjiqm"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; }; + rmelting = derive2 { name="rmelting"; version="1.2.0"; sha256="1im1i8mrpz774ynbik4zvx24bn41f64lk83hhrlr5x50k297q6r3"; depends=[Rdpack rJava]; }; + rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.44.0"; sha256="1a76ys3qhkvcsfiap48n02msy10nzdmpj2mn9z8wjlq6xlbyciiw"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; + rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.16.0"; sha256="1bvahrcplr3plvqy2j64shcyc6pq05q8m6pp40al7wlgj4h2ka40"; depends=[RColorBrewer]; }; + roar = derive2 { name="roar"; version="1.22.0"; sha256="1nqw0agx9x8ycdf0gw17fdlnmzpw9x3zig1wcy10xpyhyjdbbi06"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; + rols = derive2 { name="rols"; version="2.14.0"; sha256="14a0dh00j5xis6h805rvbm5inck903zvknzmjazc38vrf8l7mj0m"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; + ropls = derive2 { name="ropls"; version="1.18.8"; sha256="033i39r4037nd54jnp5zdn1vpzh61r671vmq0sf8dqrfblhm4w7a"; depends=[Biobase MultiDataSet]; }; + rpx = derive2 { name="rpx"; version="1.22.0"; sha256="1pmhmaziv7rg3m2r4l1bb643wyr47gmd52bs0hwrhrk398wjdq9z"; depends=[RCurl xml2]; }; + rqt = derive2 { name="rqt"; version="1.12.0"; sha256="1p5anp2if7v43pfjm17xbs7cnw6cnifzyv2vg7vr3c5d3yvymjw2"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; + rqubic = derive2 { name="rqubic"; version="1.32.0"; sha256="0pqzfgdwv6zq8p0wvyqrdcsvz7ll06nqq1n4v10nys4fm323kml4"; depends=[biclust Biobase BiocGenerics]; }; + rsbml = derive2 { name="rsbml"; version="2.44.0"; sha256="1dbp0aaijxn3na26b68ws0v9qzvml61ifb9z4i8pz7q6h48n7lxa"; depends=[BiocGenerics graph]; }; + rtracklayer = derive2 { name="rtracklayer"; version="1.46.0"; sha256="0lp9xsm8kqrgpwgwj7qaqcv1z6qynbz084grlpwp94zsp2ppf0n6"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; + runibic = derive2 { name="runibic"; version="1.8.0"; sha256="1m6xr10wn9k55xi23h6n7sk38m1p0hkip2f6f1pyl17gcx4b0lm2"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; + sRACIPE = derive2 { name="sRACIPE"; version="1.2.0"; sha256="0irr4cxvyg0185j0mwnq6sfvygjrljqn27syw24yfwngs86mijf4"; depends=[BiocGenerics ggplot2 gplots gridExtra htmlwidgets MASS RColorBrewer Rcpp reshape2 S4Vectors shiny shinyBS shinyjs SummarizedExperiment umap visNetwork]; }; + sRAP = derive2 { name="sRAP"; version="1.26.0"; sha256="05sjq25jz6mnfax37fh5yx6nri00ax1bhfy6wxri0hszsxvw367f"; depends=[gplots pls qvalue ROCR WriteXLS]; }; + sSeq = derive2 { name="sSeq"; version="1.24.0"; sha256="0a4hn0spva8am4rdg1syfv8pvsfb3rhwagvn8kbvfgdm9b5mzihk"; depends=[caTools RColorBrewer]; }; + safe = derive2 { name="safe"; version="3.26.0"; sha256="004vh97vdnjmwkfgris4sxkbmw8fla6snlmawkvmakc4cx1pgcb4"; depends=[AnnotationDbi Biobase SparseM]; }; + sagenhaft = derive2 { name="sagenhaft"; version="1.56.0"; sha256="0py7ddy35v4la8kpj8gaacj76b1fd5asq8wn41zjz1dyg9rxw1rj"; depends=[SparseM]; }; + samExploreR = derive2 { name="samExploreR"; version="1.10.0"; sha256="0434q03pm171da6nhbqi2lz8cg4vg1xglk0vacl6is7yyqh4adbc"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; }; + sampleClassifier = derive2 { name="sampleClassifier"; version="1.10.0"; sha256="1dcy0ckn1v88i4inrp7yyc0qalgaka0gs097ggisj3hh4l2ghvpx"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; + sangerseqR = derive2 { name="sangerseqR"; version="1.22.0"; sha256="0vx8rsrwvvnhjyg9pkki74y50g6zg5xbn6g1swgmpjih6049111p"; depends=[Biostrings shiny]; }; + sapFinder = derive2 { name="sapFinder"; version="1.24.0"; sha256="13ygpq51wn6mrl1s2d2fz79d8bbbn363595g0p6im58m2hsp7mpd"; depends=[pheatmap Rcpp rTANDEM]; }; + savR = derive2 { name="savR"; version="1.24.0"; sha256="1lsnqjl6qxbj0wai05qb2wrxrhxq5iarv2livmvwiwv70iigqygf"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; + scAlign = derive2 { name="scAlign"; version="1.2.0"; sha256="0mgdgpa3829wm8mqyx43bq2r84cziiz3sfffmr1284gnnbdi1irv"; depends=[FNN ggplot2 irlba PMA purrr Rtsne Seurat SingleCellExperiment tensorflow]; }; + scBFA = derive2 { name="scBFA"; version="1.0.0"; sha256="03hvj6pj6pa69073z9n227b9nqdkfz04q40y2pniidzgwha208fa"; depends=[copula DESeq2 ggplot2 MASS Seurat SingleCellExperiment SummarizedExperiment zinbwave]; }; + scDD = derive2 { name="scDD"; version="1.10.0"; sha256="0nk0qq664zs7dnlcamdkrrhvll01p7f96jj3igbxxlzj3dvr58w4"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; }; + scDblFinder = derive2 { name="scDblFinder"; version="1.1.8"; sha256="0gmjvz6rpndv8r9n2ds4rn6hfmrj6mmmzbf1pyvvffidcjz2p8hz"; depends=[BiocNeighbors BiocParallel data_table DelayedArray dplyr ggplot2 igraph Matrix matrixStats randomForest scater scran SingleCellExperiment SummarizedExperiment]; }; + scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.6.0"; sha256="1066y6mskhv4b6r105lp7yibhx9fh69dyl6nkvmdfhqfy3jgky27"; depends=[dplyr ggplot2 magrittr rlang tibble]; }; + scGPS = derive2 { name="scGPS"; version="1.0.0"; sha256="1xxyb1s8c0dk7pypp00jy9ljypi7ijjhgf2hzz1s6a2ahvdpz0jl"; depends=[caret DESeq dplyr dynamicTreeCut fastcluster ggplot2 glmnet locfit Rcpp RcppArmadillo RcppParallel SingleCellExperiment SummarizedExperiment]; }; + scMerge = derive2 { name="scMerge"; version="1.2.0"; sha256="1wn3plqsj77pffy8wgxh9hm9wzxljgvsfw0sr8hwkfb2kxn0cp22"; depends=[BiocParallel BiocSingular cluster DelayedArray DelayedMatrixStats distr igraph M3Drop pdist proxy Rcpp RcppEigen ruv S4Vectors SingleCellExperiment SummarizedExperiment testthat]; }; + scPCA = derive2 { name="scPCA"; version="1.0.0"; sha256="1yalszwzwj4ipksy0d8xc6792bfxkrnl2gifq0q99j3l3y2gi0l3"; depends=[assertthat BiocParallel cluster dplyr elasticnet kernlab origami purrr Rdpack stringr tibble]; }; + scPipe = derive2 { name="scPipe"; version="1.8.0"; sha256="0wxrgmh6nrsql94bly8ps40pw21x7pzlsld0657q9kidbaili5rr"; depends=[AnnotationDbi BiocGenerics biomaRt dplyr GenomicRanges GGally ggplot2 glue magrittr MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib robustbase rtracklayer S4Vectors scales SingleCellExperiment stringr SummarizedExperiment testthat zlibbioc]; }; + scRecover = derive2 { name="scRecover"; version="1.2.0"; sha256="1284h5h5prc7b1yxwxwvhp4r655p24fzg1n3d8qac4nacm4nc9ll"; depends=[bbmle BiocParallel doParallel foreach gamlss kernlab MASS Matrix penalized preseqR pscl Rmagic rsvd SAVER]; }; + scTGIF = derive2 { name="scTGIF"; version="1.0.0"; sha256="1n2hbmmqjz6n4vzmbkdpmxcf6vydfq1hxswafdbgg8ax8lgdqzsa"; depends=[Biobase BiocStyle GSEABase knitr msigdbr nnTensor plotly RColorBrewer Rcpp rmarkdown S4Vectors scales SingleCellExperiment SummarizedExperiment tagcloud]; }; + scTensor = derive2 { name="scTensor"; version="1.2.1"; sha256="0difmdfj0pmp43ymh08wa76py7nq0hdhc85pv2rfw0z3smw7kfj2"; depends=[abind AnnotationDbi AnnotationHub BiocManager BiocStyle Category checkmate crayon DOSE GOstats heatmaply igraph knitr MeSHDbi meshr nnTensor outliers plotly plotrix reactome_db ReactomePA rmarkdown RSQLite rTensor S4Vectors SingleCellExperiment SummarizedExperiment tagcloud visNetwork]; }; + scater = derive2 { name="scater"; version="1.14.6"; sha256="0sxd1s8wdlj9926bagq4crjrk1nnmh3j3bhgrw160zfgc3y8pzck"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats ggbeeswarm ggplot2 Matrix Rcpp S4Vectors SingleCellExperiment SummarizedExperiment viridis]; }; + scde = derive2 { name="scde"; version="2.14.0"; sha256="0g0hh8s09makjgyf9vfx2hv45c1vx3fp9df45zh3nqxqp2ncyc6a"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; + scds = derive2 { name="scds"; version="1.2.0"; sha256="00p3qf67wyh1ibkb9qwbsbkrxkdny5s9amcpssspcaphzj58vm4v"; depends=[dplyr Matrix pROC S4Vectors SingleCellExperiment SummarizedExperiment xgboost]; }; + scfind = derive2 { name="scfind"; version="1.8.0"; sha256="185mxjzr4r173djjxpx8wy0b3x5laa7mw04ly3izhzgrdnm13ydr"; depends=[bit dplyr hash Rcpp reshape2 SingleCellExperiment SummarizedExperiment]; }; + schex = derive2 { name="schex"; version="1.0.55"; sha256="08f7q8231lxhi4pw9p3408sqa7yzz5jm5fy7hzvm8ylkydalxvw1"; depends=[cluster dplyr entropy ggplot2 hexbin Seurat SingleCellExperiment]; }; + scmap = derive2 { name="scmap"; version="1.8.0"; sha256="0jsd0fzsnf8ixssd8n3a5wcfjrjqyizbxwh27rasyy6paini375d"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scmeth = derive2 { name="scmeth"; version="1.6.0"; sha256="0qig5jyw2pv1qdf9ghl8fa46f1y8xarsq673d18jfdnpndg2ma3h"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; }; + scone = derive2 { name="scone"; version="1.10.0"; sha256="1hfsbnix0y9ad6bj0d8q2aw13pb3vjcaa0dfwxxapzl90zwbsjhp"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; }; + scoreInvHap = derive2 { name="scoreInvHap"; version="1.8.0"; sha256="1wxg79qla1vax6kng70wv50alzy85kkzfsdhr14pgzzf5rhjm47r"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; }; + scran = derive2 { name="scran"; version="1.14.6"; sha256="1y8wlgk5zbv7c7gcp0ahfpbh9lifab7y3zwf0093fzaw7vr1y6cr"; depends=[beachmat BH BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats dqrng edgeR igraph limma Matrix Rcpp S4Vectors scater SingleCellExperiment statmod SummarizedExperiment]; }; + scruff = derive2 { name="scruff"; version="1.4.2"; sha256="1wcw2af6pas5x4j8widnvgk8y41bg80pmn2dxfrijq1ipvfw8lj1"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes plyr Rsamtools rtracklayer S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment]; }; + scsR = derive2 { name="scsR"; version="1.22.0"; sha256="1rp24r88br8d3k47a7nx7ffm8xr76aihbl8ar24275scjmw24g04"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; }; + segmentSeq = derive2 { name="segmentSeq"; version="2.20.0"; sha256="079jzm0q69mw15c3i6pcgr9zxlkw7kwshk48qpavsg666v5nhjm7"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; + semisup = derive2 { name="semisup"; version="1.10.0"; sha256="07qwjf5gifbpy4xaf7216xgawyy9b3k4cs2260bis7h3slmrjzs2"; depends=[VGAM]; }; + seq2pathway = derive2 { name="seq2pathway"; version="1.18.0"; sha256="01kgn4cxiy51bmzc5kvc5g8k1gk45wzlhs3cvl0b7wknz8ggyzgk"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; + seqCAT = derive2 { name="seqCAT"; version="1.8.0"; sha256="160i6v28d10p45bxhvvlcycfc9x1v00y8sg98ykcnvvwv8lcc0is"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges rlang rtracklayer S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; + seqCNA = derive2 { name="seqCNA"; version="1.32.0"; sha256="170s5j4qsmvmnimsbdf04436xi8jcy4hd0ivqymzadcwn34l3nx5"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; + seqLogo = derive2 { name="seqLogo"; version="1.52.0"; sha256="0s94aahp8ma1crmp83dz65ifjwrx6wqi3q6005lmbp8yk2x1rkj4"; depends=[]; }; + seqPattern = derive2 { name="seqPattern"; version="1.18.0"; sha256="1gxrq6s2hiyac69idh5r1nbr1s69n0hg4ap2skm4g6857av9pwqf"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; + seqTools = derive2 { name="seqTools"; version="1.20.0"; sha256="04d1n2rl4d64vczclc32nslw9q50ji15nl9ndnjm0brx5qfym447"; depends=[zlibbioc]; }; + seqbias = derive2 { name="seqbias"; version="1.34.0"; sha256="19vbdyjblij2533ibmrw1n0rkqfrbflma6cg5b79ghks0mg7z8hq"; depends=[Biostrings GenomicRanges Rhtslib]; }; + seqcombo = derive2 { name="seqcombo"; version="1.8.0"; sha256="0lg1afphjsi7ni5a92njhkgphcq5cdcjlp1r3rxzav90zwz6c7fc"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; }; + seqplots = derive2 { name="seqplots"; version="1.24.0"; sha256="0ydl46w9aixaaflxpcg3h2f8v9m90xqwv9yvzyr3j3b62gmrhg5i"; depends=[BiocManager Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; + seqsetvis = derive2 { name="seqsetvis"; version="1.6.0"; sha256="1jyv4w5f1x2pgbvmclrbf69bgrln7xkj3k60r73dg9nzp31h6dnr"; depends=[data_table eulerr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma pbapply png RColorBrewer Rsamtools rtracklayer S4Vectors]; }; + sesame = derive2 { name="sesame"; version="1.4.0"; sha256="0ym7wad9n2da2zm1navnqgbwin9qxag0666h36bmnz4zk8i984lj"; depends=[BiocParallel DNAcopy GenomicRanges ggplot2 illuminaio IRanges MASS matrixStats preprocessCore R6 randomForest S4Vectors sesameData wheatmap]; }; + sevenC = derive2 { name="sevenC"; version="1.6.0"; sha256="164qny66zzs4q04zv6y4ybpbdpqc428055pgnqq21cw07psymlfm"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; }; + sevenbridges = derive2 { name="sevenbridges"; version="1.16.0"; sha256="1wskyhsk1z6jlbb31fnx241nbzzg81aa6m10dhymmk37ha7gqyif"; depends=[curl docopt dplyr httr jsonlite objectProperties S4Vectors stringr uuid yaml]; }; + shinyMethyl = derive2 { name="shinyMethyl"; version="1.22.0"; sha256="0c4v1gdmz6s1hz06jrr3j669c4zi2msivrck09vw4ah7m5swx8c1"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; + shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.24.0"; sha256="1ab5qvz1brp4sx62nfw0rrlxka7zskkdpkmr75g3fdnbqpn6c4qi"; depends=[mixtools rTANDEM shiny xtable]; }; + sigFeature = derive2 { name="sigFeature"; version="1.4.0"; sha256="03y3nj6qfwrcbx3yh8yfb2hsrgs0wdkxqdp06gn4c2rqhz1mzl7h"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; }; + sigPathway = derive2 { name="sigPathway"; version="1.54.0"; sha256="057qdkbfldpy6hsysk9mrs1vvsqgyl9yx2s6c2f26jz1pardkbqb"; depends=[]; }; + sigaR = derive2 { name="sigaR"; version="1.34.0"; sha256="1a34mj08w42pm3ij3kydiipccn10rhn6pl1ms4pxa4bvw1ja8ynj"; depends=[Biobase CGHbase corpcor igraph limma marray MASS mvtnorm penalized quadprog snowfall]; }; + siggenes = derive2 { name="siggenes"; version="1.60.0"; sha256="03lmq3hqprwps4miynl2vhqi3v4als5vqmz4lb19lk5a4zja72b4"; depends=[Biobase multtest scrime]; }; + sights = derive2 { name="sights"; version="1.12.0"; sha256="06xh4mqxmw2f6lpq4phxbpjax0lvsbqdj2z6r8z015w7zxnilgp1"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; + signatureSearch = derive2 { name="signatureSearch"; version="1.0.3"; sha256="1f2428996apz15nhsq0w4hhcmmg4z3jrfgn33dy8mnh9rvapxn9h"; depends=[AnnotationDbi BiocParallel clusterProfiler data_table DelayedArray DOSE dplyr ExperimentHub fastmatch fgsea ggplot2 GSEABase HDF5Array magrittr Matrix qvalue Rcpp readr reshape2 rhdf5 RSQLite scales SummarizedExperiment visNetwork]; }; + signeR = derive2 { name="signeR"; version="1.12.0"; sha256="0nw20w2645995pa0jg911gxir2n7ih6d3d45csh3vk5dmy2imwmh"; depends=[BiocGenerics Biostrings class GenomeInfoDb GenomicRanges IRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; + signet = derive2 { name="signet"; version="1.6.0"; sha256="02iff3zcbm27aav4llblwm248njr9sg44y8sd0pxkwb2yb297593"; depends=[graph igraph RBGL]; }; + sigsquared = derive2 { name="sigsquared"; version="1.18.0"; sha256="15f8ra46dx1hhz1z2a46m562v54clnrql8sm9g50rs427hmmbrj0"; depends=[Biobase survival]; }; + similaRpeak = derive2 { name="similaRpeak"; version="1.18.0"; sha256="1x5r6mkcnv6j6q5d0z7p7aqsaycsmcp07j9dbmgjiflin10h939n"; depends=[R6]; }; + simpleaffy = derive2 { name="simpleaffy"; version="2.62.0"; sha256="18bz3pfgp0f7906flrljx97ann8s71pnb8gpw7nah46n8vqc0xcs"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; + simulatorZ = derive2 { name="simulatorZ"; version="1.20.0"; sha256="1mhpvyglzcc62hzq3ahwjc5jzilgv5waw21r3m7qn3zj9z45gfdf"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc SummarizedExperiment survival]; }; + sincell = derive2 { name="sincell"; version="1.18.0"; sha256="17ns1mq3xwdzp33rfz6ak4cq5wa3bx624hbxshxxw7hl1ak9kscb"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; + singleCellTK = derive2 { name="singleCellTK"; version="1.6.0"; sha256="0yw40xprfaa7vz9dw3rmqxdm6vf1qicncx74m4v37glnjvb0k7cd"; depends=[AnnotationDbi ape Biobase celda circlize cluster colourpicker ComplexHeatmap data_table DelayedArray DESeq2 DT enrichR ggplot2 ggtree gridExtra GSVA GSVAdata limma MAST matrixStats multtest plotly RColorBrewer reshape2 Rtsne S4Vectors shiny shinyalert shinyBS shinycssloaders shinyjs shinythemes SingleCellExperiment SummarizedExperiment sva umap]; }; + singscore = derive2 { name="singscore"; version="1.6.0"; sha256="1jdaj16jjssd763fpbmjrlrldan3a6l6z5a96hb8nd08mvwmmd4g"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape reshape2 S4Vectors SummarizedExperiment tidyr]; }; + sitePath = derive2 { name="sitePath"; version="1.2.2"; sha256="0y1n494nmsh9pvivwrkxinm98lcz8y85csk81dw3bbk9lpfdssdw"; depends=[ape Rcpp seqinr]; }; + sizepower = derive2 { name="sizepower"; version="1.56.0"; sha256="05gmwnxzrf43l5qv4nrbapy26m2m890mshq7bmgkx7h9a8mxz5zr"; depends=[]; }; + skewr = derive2 { name="skewr"; version="1.18.0"; sha256="0i6i2r07kfif1vn78p975yj8f5mkzvarvcgm41fiah22dnq3v2fv"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; }; + slalom = derive2 { name="slalom"; version="1.8.0"; sha256="0c22sknb0s40hz8hpsvn7z3ha1lm465q00awnbmqaidargciqb5r"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; + slingshot = derive2 { name="slingshot"; version="1.4.0"; sha256="09w70jihn0w8mpafw0f2qr3cwjyqm040svl4fr4i3s2zmiszg848"; depends=[ape igraph matrixStats princurve SingleCellExperiment SummarizedExperiment]; }; + slinky = derive2 { name="slinky"; version="1.4.0"; sha256="00qijpa4qwns2afv1pw8fb8njay180hglpy503dqjrm55xc75bax"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; }; + snapCGH = derive2 { name="snapCGH"; version="1.56.0"; sha256="152n5lnnw5limvslryavmg5f2w75axvv6ha8yipwglm2y4ydp7m6"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; + snm = derive2 { name="snm"; version="1.34.0"; sha256="0bh2pi7rny7d4b9viswm9ypsj0sk7sns60mcyjdp90vzl0lmw7xx"; depends=[corpcor lme4]; }; + snpStats = derive2 { name="snpStats"; version="1.36.0"; sha256="1xq1rjljg70h5mshdza56dis0iv1a20sivs6dav3w5jbdd1l5qkh"; depends=[BiocGenerics Matrix survival zlibbioc]; }; + soGGi = derive2 { name="soGGi"; version="1.18.0"; sha256="1f6jgy0hk7n4i4akfgg6vqbcjix4g4rdp0mscm5nvs9anzmsgrxv"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + sojourner = derive2 { name="sojourner"; version="1.0.1"; sha256="1rgk23360sshk70lj960ys3k7xbh02rs6czhd5crksrvs0pd6cfp"; depends=[boot dplyr EBImage fitdistrplus ggplot2 gridExtra lattice MASS mclust minpack_lm mixtools mltools nls2 pixmap plyr R_matlab Rcpp reshape2 rlang rtiff sampSurf scales shiny shinyjs sp truncnorm]; }; + sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.10.0"; sha256="0nf85w327rzx8azk4x45bkfg4pjzjyikmghbsfk8ym4n499br1l1"; depends=[MASS MCMCpack optparse tmvtnorm]; }; + sparsenetgls = derive2 { name="sparsenetgls"; version="1.4.0"; sha256="0d5yvfpwrjs6sgcaihspar7g1byf35qfgsrcnsl78mxkciqdzcdc"; depends=[glmnet huge MASS Matrix parcor]; }; + specL = derive2 { name="specL"; version="1.20.0"; sha256="1q0vwsyb5pdaxpq6k9x3lpjmwpk1wyf1wy76jrii0vrkb493kb2g"; depends=[DBI protViz RSQLite seqinr]; }; + spikeLI = derive2 { name="spikeLI"; version="2.46.0"; sha256="1kzlqjnqid65sp0lf7hj1bsiq1b5jrwkivrl63gqrsrhshhpa00y"; depends=[]; }; + spkTools = derive2 { name="spkTools"; version="1.42.0"; sha256="0zg27bmh5allar9hw1bq9a89nmnl2ngf8fzn0nphcslvzqfwq43s"; depends=[Biobase gtools RColorBrewer]; }; + splatter = derive2 { name="splatter"; version="1.10.1"; sha256="00j37dphf3vsrg6ji127czrza29g5h0p1p808v2r7asdynsd1253"; depends=[akima BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats rlang S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; + splicegear = derive2 { name="splicegear"; version="1.58.0"; sha256="1smcpmglqqk0984arwc5c6gr8fv89yin2qz0xl3gmdz9wyi7cy1m"; depends=[annotate Biobase XML]; }; + splineTimeR = derive2 { name="splineTimeR"; version="1.14.0"; sha256="1hmbcpil8y06fkvx923psw66kiy5f6r1laga99jacjm6m0flkyj9"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; + splots = derive2 { name="splots"; version="1.52.0"; sha256="13yqwf0ms6r1g4ixpwl3z5vmyz8nq1ql9x74mi331x81ba4r6a4x"; depends=[RColorBrewer]; }; + spotSegmentation = derive2 { name="spotSegmentation"; version="1.60.0"; sha256="1j6nvswfz8wsjkdypx7hp63sf418mv5h4yl7cyafrq16bj269fhy"; depends=[mclust]; }; + srnadiff = derive2 { name="srnadiff"; version="1.6.0"; sha256="18v3rl9jc0pvv45jrssgcz6rlq48hw56q1wjgf1mjxhripc0m50n"; depends=[BiocManager BiocParallel BiocStyle DESeq2 devtools GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + ssPATHS = derive2 { name="ssPATHS"; version="1.0.0"; sha256="1vwj3v229ryqpc89ylvb8k4i1ylx7x4bpcdf2z67p3jzzcnsff03"; depends=[dml MESS ROCR SummarizedExperiment]; }; + sscore = derive2 { name="sscore"; version="1.58.0"; sha256="091fim8ivf431hhvma97qvpjsj0dqpv911x0ywdabdx2x3ajiqvz"; depends=[affy affyio]; }; + sscu = derive2 { name="sscu"; version="2.16.0"; sha256="1bk5pzl6az9cfvkqjiwpzbwz1xxxspql2vj2g6s70pn48q7cqfj5"; depends=[BiocGenerics Biostrings seqinr]; }; + ssize = derive2 { name="ssize"; version="1.60.0"; sha256="0bi0ia276mp63i36sf4lyyhljwmzgiaxfpcd8sm1x50cyh3x77wv"; depends=[gdata xtable]; }; + ssrch = derive2 { name="ssrch"; version="1.2.0"; sha256="0nzgq5kcqdnv5sqhy6nc88qhwrg97y02frd5ahhbviny1l08flfb"; depends=[DT shiny]; }; + ssviz = derive2 { name="ssviz"; version="1.20.0"; sha256="0qcryd8dml3rrbliyjhic0sdx311wczyivw2si8xvw12avgds37x"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; + staRank = derive2 { name="staRank"; version="1.28.0"; sha256="1a60wp9h7if46q6kd3y1nn9g6hm9fhja3dk43c5dvy36w1rbj95k"; depends=[cellHTS2]; }; + stageR = derive2 { name="stageR"; version="1.8.0"; sha256="1rfwx2m1m3zwmf3avahxz96m5pl2s4vqax35kwh1la7n1f6s40vk"; depends=[SummarizedExperiment]; }; + statTarget = derive2 { name="statTarget"; version="1.16.1"; sha256="015pf65ygggsxsww7bmsr2m1wrngd1lhkpwmg7f04nznzcc3lk0x"; depends=[impute pdist pls plyr randomForest ROC rrcov]; }; + stepNorm = derive2 { name="stepNorm"; version="1.58.0"; sha256="1xs4s1bnkzmcnw6s1ynxlg6ik8jm80gjpi5w745h3sbz359rzr0z"; depends=[marray MASS]; }; + strandCheckR = derive2 { name="strandCheckR"; version="1.4.0"; sha256="08wi4hhyll9kwcykkfwca036fy89476s99q70gslq05rxfg3jvq4"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + subSeq = derive2 { name="subSeq"; version="1.16.0"; sha256="177rx0cbzr6vr0yfjnzj4r3rb1gzrnvryvqbwv7mxy2akzczxagb"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; + supraHex = derive2 { name="supraHex"; version="1.24.0"; sha256="0hmj5nisd2pvcs7c38gb4x2v75jj5x1flaf4mfamy3qx0jvkhh8g"; depends=[ape hexbin MASS]; }; + survcomp = derive2 { name="survcomp"; version="1.36.1"; sha256="0baw6w7kn69v4swlycm61n1wdw6kav7m1ir47qvjgzanqlnxw7gc"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; + survtype = derive2 { name="survtype"; version="1.2.0"; sha256="04dw8a7siyshgr6y3gnhkaxdly5890cazz2cnlzdaicxl7qij111"; depends=[clustvarsel pheatmap SummarizedExperiment survival survminer]; }; + sva = derive2 { name="sva"; version="3.34.0"; sha256="1bzms6idx30s4nxl610zwa8rjxsyxb5pf3vxsdfmxg8j4pab9gh1"; depends=[BiocParallel genefilter limma matrixStats mgcv]; }; + swfdr = derive2 { name="swfdr"; version="1.12.0"; sha256="0zls12i05sq3qf18d64rcdmg6jp2rsg5kijax7z66zswj8schy3j"; depends=[]; }; + switchBox = derive2 { name="switchBox"; version="1.22.0"; sha256="0qrjn3ba1i9h497ybzn5xd1yrppdaimjcag8d1sb1v3lf99kxayf"; depends=[gplots pROC]; }; + switchde = derive2 { name="switchde"; version="1.12.0"; sha256="0fni2lh6ygazqkczwy4d26vy758k63lp7by5816pxwhs2gqrad9f"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; + synapter = derive2 { name="synapter"; version="2.10.0"; sha256="0pmk48zwzwf4vhwna0k7wr9ihzh66daplfq8mig72swrhv6a3f0z"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; }; + synergyfinder = derive2 { name="synergyfinder"; version="2.0.12"; sha256="0b324m92vpm6zjsxq9l0dip2ibxjc3py6qlv8lkgnr339h8863nk"; depends=[drc ggplot2 lattice nleqslv reshape2]; }; + synlet = derive2 { name="synlet"; version="1.16.0"; sha256="14wp0fs9054w32hj9999zg5pmj7c36fkg44axcd447f7ryd5ii9j"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; + systemPipeR = derive2 { name="systemPipeR"; version="1.20.0"; sha256="17r25v9wcglyma2v1c8fka80dm7fx86saxlsb2aprmwi4h3dhb0j"; depends=[annotate batchtools BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation yaml]; }; + tRNA = derive2 { name="tRNA"; version="1.4.0"; sha256="0yxww91q8p36wmsvpm60wnhc3l7bjpmb05a86xh3237hr3l1c8ik"; depends=[assertive BiocGenerics Biostrings GenomicRanges ggplot2 IRanges Modstrings S4Vectors scales stringr Structstrings XVector]; }; + tRNAdbImport = derive2 { name="tRNAdbImport"; version="1.4.0"; sha256="0g3zcphs3g0dn4kizhw3j3v389skgv1sckqrss80wz31qli2zc2x"; depends=[assertive BiocGenerics Biostrings GenomicRanges httr IRanges Modstrings S4Vectors stringr Structstrings tRNA xml2]; }; + tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.6.0"; sha256="0a6f2bfqkjik25lqsgd00mxiw2gf75xkxb0f9pwlg13ab2hdk1dp"; depends=[assertive BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors stringr Structstrings tRNA XVector]; }; + tRanslatome = derive2 { name="tRanslatome"; version="1.24.0"; sha256="002ixhp0rfkidr1rdjxz6278ixa2vyd9a2yhd8hb5njam6hc6wbn"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd sigPathway topGO]; }; + target = derive2 { name="target"; version="1.0.0"; sha256="1fcdg3axqgz5fdvzfv0qcsshibxijb3waa9whbm9gjk5qmvgmd2l"; depends=[BiocGenerics GenomicRanges IRanges matrixStats shiny]; }; + tenXplore = derive2 { name="tenXplore"; version="1.8.0"; sha256="005147m7pgy1163a1mgbhqz1xj6sz6nn7gz3x4426wniwm19libj"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; + ternarynet = derive2 { name="ternarynet"; version="1.30.0"; sha256="0ywgq00b9qyxsqdcrgdyvz0zk8ybb9gy3j3rkicbgxxpsa3cy3qf"; depends=[igraph]; }; + tigre = derive2 { name="tigre"; version="1.40.0"; sha256="1c4knji2wdl95464vb01pf3yhgx98sgr1ad389rjlbzlpnkaf3ad"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; + tilingArray = derive2 { name="tilingArray"; version="1.64.0"; sha256="0nzh19bci2vs7h77plaxnbc59jc1rhzdzdf90saf183c8rwgb5hk"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; + timecourse = derive2 { name="timecourse"; version="1.58.0"; sha256="08mhyvflnp49rmhkzjzbrgk17qi5889hrlssahxzkdn9snizlp5h"; depends=[Biobase limma marray MASS]; }; + timescape = derive2 { name="timescape"; version="1.10.0"; sha256="1xsrva4hgkjhlib7ij7kjfddbykwafljdfhwrgnmybr3rvsqa5vi"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; + tkWidgets = derive2 { name="tkWidgets"; version="1.64.0"; sha256="0livknxr6w4vpnz3jnn3dgh9lir3d5hiwkyix9pmawqka1h21ig7"; depends=[DynDoc widgetTools]; }; + tofsims = derive2 { name="tofsims"; version="1.14.0"; sha256="15j5wdkil3f9ya6hcykv7ma1kf0dj6n3a3bhs804nmq26adh4grv"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; + topGO = derive2 { name="topGO"; version="2.38.1"; sha256="1kw9m2j67895k58lx9msc248pjwblp8clxwgsl01cql7sgi1xzlf"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; + topconfects = derive2 { name="topconfects"; version="1.2.0"; sha256="1j6g0s6h70cc9p3gyqyaf3syxbx9zskhn60p0kn05w1i72xlvccx"; depends=[assertthat ggplot2]; }; + topdownr = derive2 { name="topdownr"; version="1.8.0"; sha256="131417h29szrpq4nygxz3g19j71hlnsdvdng9p791q112xgqk7xr"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics S4Vectors]; }; + trackViewer = derive2 { name="trackViewer"; version="1.22.1"; sha256="1d6xa8fmq5g9snrs324dvrnfrqpkjkv9jdal7fadad152mfq4p7n"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rgraphviz Rsamtools rtracklayer S4Vectors scales]; }; + tracktables = derive2 { name="tracktables"; version="1.20.0"; sha256="198mivglr93g0qrn3zxkddrrc4hnwhja2xlhxyxmbvd9hggf5x2h"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; + tradeSeq = derive2 { name="tradeSeq"; version="1.0.0"; sha256="179yqf0122c6hgdrv4p37c9c3zp1vvcz3pzaivv60qbywd1zdd1g"; depends=[BiocParallel clusterExperiment edgeR ggplot2 magrittr mgcv pbapply princurve RColorBrewer S4Vectors SingleCellExperiment slingshot SummarizedExperiment]; }; + transcriptR = derive2 { name="transcriptR"; version="1.14.0"; sha256="1v0q629ahm8awblmxm08lgvgp75spn2w6j4m896qhhqgn3h4w1nj"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; + transcriptogramer = derive2 { name="transcriptogramer"; version="1.8.0"; sha256="142wmbwf2inlp16pmpnq4f7ijmka3hl868r6f6lzhk1dnk4akmdv"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; }; + transite = derive2 { name="transite"; version="1.4.0"; sha256="18ij5a0iqxsnrv3ym0bbm1pkn4qf1lf6fhq9va7mbszwry1ad5z6"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 ggseqlogo gridExtra Rcpp scales TFMPvalue]; }; + traseR = derive2 { name="traseR"; version="1.16.0"; sha256="0x7awk8lj8bwgzbvx01r5r28v51lzmkwj4dhkqc1xs8ak03pslp1"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; + treeio = derive2 { name="treeio"; version="1.10.0"; sha256="1qhlw05y60g67l1bjdzjnznjvm5qbcici45npma1l1m8l5wylb8m"; depends=[ape dplyr jsonlite magrittr rlang tibble tidytree]; }; + trena = derive2 { name="trena"; version="1.8.0"; sha256="1pmapc42sspg1dbqaa4w68c3dvkzn5k59zmzir1i1dqvf4m7gqrx"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI flare GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 vbsr xgboost]; }; + triform = derive2 { name="triform"; version="1.28.0"; sha256="12qdyrcw2mcawqdw65v0hjaghzlwa10xl6j8458izcrm5k6dlvz9"; depends=[BiocGenerics IRanges yaml]; }; + trigger = derive2 { name="trigger"; version="1.32.0"; sha256="0nn20i3cdbg49p1v4an7dgv98dfpyl7h2nbpwjan3is9ardk520j"; depends=[corpcor qtl qvalue sva]; }; + trio = derive2 { name="trio"; version="3.24.2"; sha256="0qryhp17jawinblj13ljnphin84slfz37w2ripfpv9dicy05d5ir"; depends=[LogicReg siggenes survival]; }; + triplex = derive2 { name="triplex"; version="1.26.0"; sha256="1i8m4bh1g3a0cldwxdhrlm42nd8llcdgb4b440wddzhng2b8lmyg"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; + tspair = derive2 { name="tspair"; version="1.44.0"; sha256="1knwh6l5clakxk5w3nqvz6kpaiapvp3d9n25drqn6hhh139mg0ys"; depends=[Biobase]; }; + tweeDEseq = derive2 { name="tweeDEseq"; version="1.32.0"; sha256="0v89w6hr6314i4hs9sgv7zxxqm49gskgl3m7sg4pc3valmkgiz68"; depends=[cqn edgeR limma MASS]; }; + twilight = derive2 { name="twilight"; version="1.62.0"; sha256="0sgn9ypni38asj96xa8046pwg2r5pqbmzxb86hm8g98ncmsrs6js"; depends=[Biobase]; }; + twoddpcr = derive2 { name="twoddpcr"; version="1.10.0"; sha256="0nm8x77xlapabgwwkr5w6gg267yn7mf5qj8xg8z2h7bcpr288gw6"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; + tximeta = derive2 { name="tximeta"; version="1.4.5"; sha256="0qgbyi4vjyyijldvpl8pqql465cclid1fkhg9g2ssd7szqpbr36l"; depends=[AnnotationDbi BiocFileCache Biostrings ensembldb GenomeInfoDb GenomicFeatures GenomicRanges jsonlite rappdirs S4Vectors SummarizedExperiment tibble tximport]; }; + tximport = derive2 { name="tximport"; version="1.14.0"; sha256="09r23n2812q89by0r0cz2fx1gfnmn3jb3hwbg61m52bika82pakj"; depends=[]; }; + uSORT = derive2 { name="uSORT"; version="1.12.0"; sha256="0y17hic5ilibh453algrpdkyzlz96p68118g49ady37hfvd6f73f"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; + unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.22.0"; sha256="1l6rf7scxxyz4x0m4li54y6905sqj4jrx481zb9h3vqhcfcmn8lj"; depends=[BiocGenerics HTqPCR]; }; + universalmotif = derive2 { name="universalmotif"; version="1.4.9"; sha256="1dfni8g21v9n58v3wp3r6midwzjfjn4986vi9g71iwvqqbacf7gf"; depends=[ape BiocGenerics Biostrings ggplot2 ggseqlogo ggtree MASS processx Rcpp RcppThread Rdpack rlang S4Vectors yaml]; }; + variancePartition = derive2 { name="variancePartition"; version="1.16.1"; sha256="02pzsff14j4am2d949mh8xgi0c7k44g09q4lr6nqm08vf92brb6g"; depends=[Biobase BiocParallel colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS pbkrtest progress reshape2 scales]; }; + vbmp = derive2 { name="vbmp"; version="1.54.0"; sha256="08clr46pmiv8v3x2vvzy2bax1sf9np2m3zsx0waj6gwz9c6d43ry"; depends=[]; }; + vidger = derive2 { name="vidger"; version="1.6.0"; sha256="064r31r67a4c5gqradfn0wdxkzld9s1qlyzhj0l9w3b9hqb32wcv"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; }; + viper = derive2 { name="viper"; version="1.20.0"; sha256="1ba1lyag3q0yhqvgx5y36ps548jdgipyx07ifgwcd5dm91nqcacj"; depends=[Biobase e1071 KernSmooth mixtools]; }; + vsn = derive2 { name="vsn"; version="3.54.0"; sha256="1naqzb2m0km8fzr6chf9z71sisrwviy1fdi9b3hn4i8p18b4kqzh"; depends=[affy Biobase ggplot2 lattice limma]; }; + vtpnet = derive2 { name="vtpnet"; version="0.26.0"; sha256="1s7wcn45bs2r3gg73vs3m6vkbqg44ixxz8i5hgd6l3dhha7rkfqq"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; + vulcan = derive2 { name="vulcan"; version="1.8.0"; sha256="1n60fy4jql5ljqh9bg7193znns0m5hzmb35d2h6nx13wzlj1yf8q"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; + waddR = derive2 { name="waddR"; version="1.0.0"; sha256="19hsfyllg1xahxln3gk0w98s6avhmqm42f2zminm42dhn7cq5h2d"; depends=[arm BiocFileCache BiocParallel Rcpp RcppArmadillo SingleCellExperiment]; }; + wateRmelon = derive2 { name="wateRmelon"; version="1.30.0"; sha256="0a66fq04yph9dis91lzjk9kh134zy6fj98yklrwf24r1080qngx0"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; + wavClusteR = derive2 { name="wavClusteR"; version="2.20.0"; sha256="0vq3xxsvwq86rlya7xc92sc4i6b48sib0pcina3xivg3ky2j3z7y"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; }; + waveTiling = derive2 { name="waveTiling"; version="1.28.0"; sha256="0d7l559zlmly8mncmh1zhkqmsml0bwwfpm7ccp8l26y852vwf7hf"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; }; + weaver = derive2 { name="weaver"; version="1.52.0"; sha256="0c47i05d57gwimjnnppngzl2jm7ipw6d4ha3apnzm0l6flh8x85c"; depends=[codetools digest]; }; + webbioc = derive2 { name="webbioc"; version="1.58.0"; sha256="1cwrmvh1l603k6j1r425c4vrqp0zf0x7bgx7y1wnbq4r7yc5sp62"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; }; + widgetTools = derive2 { name="widgetTools"; version="1.64.0"; sha256="1nqy3icayacv5mlv5s5xgfli0dqzancs6zpffrl5p237c994nyr5"; depends=[]; }; + wiggleplotr = derive2 { name="wiggleplotr"; version="1.10.1"; sha256="1pj2bsn5azs18mp5hr4g7c6rnds2y2rjjnak2785kaj7xi8jly4m"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; + xcms = derive2 { name="xcms"; version="3.8.2"; sha256="0bfl56v3l6k31i11l09nx1yqfjy6z5yragm6k83z4w0mpgk18y7g"; depends=[Biobase BiocGenerics BiocParallel IRanges lattice MassSpecWavelet MSnbase multtest mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors]; }; + xmapbridge = derive2 { name="xmapbridge"; version="1.44.0"; sha256="0ibaibdw8rjpirlp0x7hrjc7jhckw3inzymgqpnb9d6psaiwcvwq"; depends=[]; }; + xps = derive2 { name="xps"; version="1.46.0"; sha256="1i1hj84x6bfhrwjia3nfbcjkk8ynlb48avjrnpb3zzvx5mh35arw"; depends=[]; }; + yamss = derive2 { name="yamss"; version="1.12.1"; sha256="12jr7hbrwhb1gfjadj1024hv80ra22miy46dn40nmsrbklkfn3rw"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; + yaqcaffy = derive2 { name="yaqcaffy"; version="1.46.0"; sha256="0kzzqsf1lfbcmy95w2z0c9qrvp7mbwm50k2l9wvz3xa5wz6xa7gz"; depends=[simpleaffy]; }; + yarn = derive2 { name="yarn"; version="1.12.0"; sha256="0891a10adkhm1zpm7fpcxc2xfxjf9yrpckaz87b2wdjdiwivc4cp"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; + zFPKM = derive2 { name="zFPKM"; version="1.8.0"; sha256="1hg0vc0ns8d4jpddn1v5a5m13a033b0wf1al01pb1lvmx5mzzr2n"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; }; + zinbwave = derive2 { name="zinbwave"; version="1.8.0"; sha256="14vs1385sfr1jjjycd48xz82zr39ypxa44yg5mlvh61fifd3whr7"; depends=[BiocParallel edgeR genefilter Matrix SingleCellExperiment softImpute SummarizedExperiment]; }; + zlibbioc = derive2 { name="zlibbioc"; version="1.32.0"; sha256="1xh7qan0w62mzsmanbx9vcj6ygdfhzw1abaxijkq7f4nh5w87idj"; depends=[]; }; } diff --git a/pkgs/development/r-modules/bioc-workflows-packages.nix b/pkgs/development/r-modules/bioc-workflows-packages.nix new file mode 100644 index 0000000000000..51b032ef91e2a --- /dev/null +++ b/pkgs/development/r-modules/bioc-workflows-packages.nix @@ -0,0 +1,36 @@ +# This file is generated from generate-r-packages.R. DO NOT EDIT. +# Execute the following command to update the file. +# +# Rscript generate-r-packages.R bioc-workflows >new && mv new bioc-workflows-packages.nix + +{ self, derive }: +let derive2 = derive { biocVersion = "3.10"; }; +in with self; { + BgeeCall = derive2 { name="BgeeCall"; version="1.2.1"; sha256="0v9aj4nlgx9yj2n2wpispjwlvg53b8x8mz6fnnnn73fyh0pplzmm"; depends=[biomaRt Biostrings GenomicFeatures jsonlite rhdf5 rtracklayer tximport]; }; + BiocMetaWorkflow = derive2 { name="BiocMetaWorkflow"; version="1.8.0"; sha256="0fx2s26clk67xslclhs5zxjfcra2pczw8389r4w98v8dclhrws4d"; depends=[]; }; + CAGEWorkflow = derive2 { name="CAGEWorkflow"; version="1.2.0"; sha256="0xbkbp0aw1vvkp7fq41qbh2mgxypj6y41vk7fzjx06hwhbjaqwdv"; depends=[CAGEfightR nanotubes]; }; + EGSEA123 = derive2 { name="EGSEA123"; version="1.10.0"; sha256="1bhpj102ncbkyx04kgmdj06r1fy9fxvc3zzi97mizn0vysvldihc"; depends=[edgeR EGSEA illuminaio limma]; }; + ExpressionNormalizationWorkflow = derive2 { name="ExpressionNormalizationWorkflow"; version="1.12.0"; sha256="0p8d1bcnzjxc1l8sbrs18jpdr8h08gx7mi69z5l3a7fq3wxv4lcy"; depends=[Biobase limma lme4 matrixStats pvca snm sva vsn]; }; + RNAseq123 = derive2 { name="RNAseq123"; version="1.10.0"; sha256="083j9rv39bhfzz4rvmv0ydiq9m9yahmmdk9n9gc733f884p79kin"; depends=[edgeR Glimma gplots limma Mus_musculus RColorBrewer]; }; + RnaSeqGeneEdgeRQL = derive2 { name="RnaSeqGeneEdgeRQL"; version="1.10.0"; sha256="0pj2wrnhsb609cw37x5jqjdk2gsv7njiibnrhw76gz1gasjyq15p"; depends=[edgeR GO_db gplots org_Mm_eg_db]; }; + SingscoreAMLMutations = derive2 { name="SingscoreAMLMutations"; version="1.2.0"; sha256="0ipjf3nia3cjfza81l6xqgb4gpzwd0zcsvp248pd1p9s8sgmrb0y"; depends=[dcanr edgeR ggplot2 gridExtra GSEABase mclust org_Hs_eg_db plyr reshape2 rtracklayer singscore SummarizedExperiment TCGAbiolinks]; }; + TCGAWorkflow = derive2 { name="TCGAWorkflow"; version="1.10.0"; sha256="18b6ar620xszac6r1kgmpl71a59p00xfplj7cjyy5iq9723rpacn"; depends=[AnnotationHub biomaRt BSgenome_Hsapiens_UCSC_hg19 c3net ChIPseeker circlize clusterProfiler ComplexHeatmap downloader DT ELMER gaia GenomeInfoDb GenomicRanges ggplot2 ggthemes knitr maftools minet motifStack MotIV pander pathview pbapply rGADEM RTCGAToolbox SummarizedExperiment TCGAbiolinks TCGAWorkflowData]; }; + annotation = derive2 { name="annotation"; version="1.10.0"; sha256="0dkbvznymbfsxsh2j5xd49hlz7fgl56wdikppc9518q725dxg650"; depends=[AnnotationHub biomaRt BSgenome BSgenome_Hsapiens_UCSC_hg19 Homo_sapiens org_Hs_eg_db org_Mm_eg_db Organism_dplyr TxDb_Athaliana_BioMart_plantsmart22 TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_ensGene VariantAnnotation]; }; + arrays = derive2 { name="arrays"; version="1.12.0"; sha256="1kly63prhqnlf2dx5bhjgcfkx943aj63wrknbdncy9zgllfmlgx8"; depends=[]; }; + chipseqDB = derive2 { name="chipseqDB"; version="1.10.0"; sha256="07gx6mxx2q4l99w9gjh76zbi6vn0a7rvl1ah2ps7bav65x0s7sb3"; depends=[]; }; + csawUsersGuide = derive2 { name="csawUsersGuide"; version="1.2.0"; sha256="011qg7mg7svpr7rsgianb1zd9a8aqmf4dlzx32csd1kbl78dsl21"; depends=[]; }; + cytofWorkflow = derive2 { name="cytofWorkflow"; version="1.10.2"; sha256="1bys33nb3l2jhqw3snkrnzj9dlnyfz143jhzz9p6llzclj64z4d7"; depends=[BiocStyle CATALYST cowplot diffcyt HDCytoData knitr readxl uwot]; }; + eQTL = derive2 { name="eQTL"; version="1.10.0"; sha256="047dq3icd9zqsy4l1kirx2w4022zigwm5pgsn9501d3jx40yp1sn"; depends=[bibtex biglm data_table doParallel foreach GenomeInfoDb GGdata GGtools knitcitations lumi lumiHumanAll_db rmeta S4Vectors scatterplot3d SNPlocs_Hsapiens_dbSNP144_GRCh37 snpStats yri1kgv]; }; + generegulation = derive2 { name="generegulation"; version="1.10.0"; sha256="1izvc9nm7iczxci8ybgdgzgcgi1c5j9c2ws7j80xblnn058nv2sh"; depends=[Biostrings BSgenome_Scerevisiae_UCSC_sacCer3 GenomicFeatures MotifDb motifStack org_Sc_sgd_db S4Vectors seqLogo TxDb_Scerevisiae_UCSC_sacCer3_sgdGene]; }; + highthroughputassays = derive2 { name="highthroughputassays"; version="1.10.0"; sha256="1i5z1f8s1iwll2m49xvkgzgf8bl11v2lpx8sgfbnfilhclxgig78"; depends=[flowCore flowStats flowWorkspace]; }; + liftOver = derive2 { name="liftOver"; version="1.10.0"; sha256="1lnc9q0wpn9xrbxcwvv7h2ihl93qy860vr9xlyx9nb5h0jsv4x66"; depends=[BiocGenerics GenomicRanges gwascat Homo_sapiens rtracklayer]; }; + maEndToEnd = derive2 { name="maEndToEnd"; version="2.6.0"; sha256="1f5nd5b9h71a478b8z57g64lihb3z6nvkzf9z78g9yphzqikmwdh"; depends=[ArrayExpress arrayQualityMetrics Biobase clusterProfiler dplyr genefilter geneplotter ggplot2 gplots hugene10sttranscriptcluster_db limma matrixStats oligo oligoClasses openxlsx pd_hugene_1_0_st_v1 pheatmap RColorBrewer ReactomePA Rgraphviz stringr tidyr topGO]; }; + methylationArrayAnalysis = derive2 { name="methylationArrayAnalysis"; version="1.10.0"; sha256="1ddbgg8q4bhiaypci3z4gllpqwynrvm340s4l7s6n99f3fb94avz"; depends=[BiocStyle DMRcate FlowSorted_Blood_450k Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest knitr limma matrixStats minfi minfiData missMethyl RColorBrewer rmarkdown stringr]; }; + proteomics = derive2 { name="proteomics"; version="1.10.0"; sha256="1hcl4g3adwyq1sns2nq56zx8rcd55fab7pvj09wkr939yxcn4bnx"; depends=[hpar MLInterfaces MSGFplus MSnbase MSnID mzID mzR pRoloc pRolocdata rols rpx]; }; + recountWorkflow = derive2 { name="recountWorkflow"; version="1.10.0"; sha256="0l4ia2nfiphkxhp3w0ds3mx402nv789b8s64c28fvrha1fak33wj"; depends=[bumphunter clusterProfiler derfinder derfinderPlot DESeq2 edgeR GenomicFeatures GenomicRanges gplots limma org_Hs_eg_db recount regionReport rtracklayer]; }; + rnaseqDTU = derive2 { name="rnaseqDTU"; version="1.6.0"; sha256="12nsgyh53dasczwp1s9yra8h6g2fh1fy61fk64ngjzjjvgrzav3g"; depends=[DESeq2 devtools DEXSeq DRIMSeq edgeR rafalib stageR]; }; + rnaseqGene = derive2 { name="rnaseqGene"; version="1.10.0"; sha256="0jf9rndz16db6i6ps69qnng4i9bkiarkrdcq4n9jc6qcr6jdg6mn"; depends=[airway AnnotationDbi apeglm BiocStyle DESeq2 dplyr fission genefilter ggbeeswarm ggplot2 glmpca Gviz hexbin magrittr org_Hs_eg_db pheatmap PoiClaClu RColorBrewer ReportingTools RUVSeq sva tximeta vsn]; }; + sequencing = derive2 { name="sequencing"; version="1.10.0"; sha256="0p7kz40idfakkpixdkpk9djcsy3a5wgxbjiqbnh8gkv3z6k49wia"; depends=[AnnotationHub BiocParallel Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges RNAseqData_HNRNPC_bam_chr14 Rsamtools rtracklayer ShortRead VariantAnnotation]; }; + simpleSingleCell = derive2 { name="simpleSingleCell"; version="1.10.1"; sha256="0jv6d6fcr0w5kdvc9xgb8bb8lw6a8hja9m25c1gs3vqpnq6pfkv1"; depends=[]; }; + variants = derive2 { name="variants"; version="1.10.0"; sha256="168mkkbbqznyvxibzxhn3n3207936v5qfyrfqj9qik8bcrkc93qf"; depends=[BSgenome_Hsapiens_UCSC_hg19 cgdv17 org_Hs_eg_db PolyPhen_Hsapiens_dbSNP131 TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; +} diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix index 8c50affaeffd6..080616212a4d3 100644 --- a/pkgs/development/r-modules/cran-packages.nix +++ b/pkgs/development/r-modules/cran-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2020-01-27"; }; +let derive2 = derive { snapshot = "2020-03-19"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; ABACUS = derive2 { name="ABACUS"; version="1.0.0"; sha256="0m1dnkwjr1522l9ddbzzx7ayxvli17sbmk6s28adpmzzjwh2kd1i"; depends=[ggplot2 shiny]; }; @@ -19,7 +19,6 @@ in with self; { ACD = derive2 { name="ACD"; version="1.5.3"; sha256="1a67bi3hklq8nlc50r0qnyr4k7m9kpvijy8sqqpm54by5hsysfd6"; depends=[]; }; ACDm = derive2 { name="ACDm"; version="1.0.4"; sha256="0b4f02ga5ra66mbrm79g0bnlzmii82rks9kmxixxqgf18yhlyjil"; depends=[dplyr ggplot2 plyr Rsolnp zoo]; }; ACEt = derive2 { name="ACEt"; version="1.8.0"; sha256="0626d6kg485xjya164wagrr5z223jvi93ywbwpdns7fkm03c0dlq"; depends=[BH MASS Rcpp RcppArmadillo]; }; - ACMEeqtl = derive2 { name="ACMEeqtl"; version="1.6"; sha256="049xjv2ym35bbn43zwi68cq27fwdh404vp0r2ca5gxgmmx8kj1cz"; depends=[filematrix]; }; ACNE = derive2 { name="ACNE"; version="0.8.1"; sha256="0kzapsalzw6jsi990qicp4glijh5ddnfimsg5pidgbwxg4i05grl"; depends=[aroma_affymetrix aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; ACSNMineR = derive2 { name="ACSNMineR"; version="0.16.8.25"; sha256="0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"; depends=[ggplot2 gridExtra scales]; }; ACSWR = derive2 { name="ACSWR"; version="1.0"; sha256="195vjrkang5cl7gwsna0aq4p0h4jym9xg9yh94bnf8vq6wf8j83n"; depends=[MASS]; }; @@ -34,17 +33,16 @@ in with self; { ADPF = derive2 { name="ADPF"; version="0.0.1"; sha256="1n7302xx77ngvp9i2h582i1mqslzllcdr0bn3pl2zk9jd8k97p7n"; depends=[]; }; ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; }; AEDForecasting = derive2 { name="AEDForecasting"; version="0.20.0"; sha256="16q2sn5zzvysyy3r32jnr21pbdkkn0k0sbarni6fdkx7pj27yijn"; depends=[changepoint forecast signal]; }; - AER = derive2 { name="AER"; version="1.2-8"; sha256="04qfqv36scl5r5fssz0qzbq64602x8bj02fy1f2gzrmvlf315gh9"; depends=[car Formula lmtest sandwich survival zoo]; }; + AER = derive2 { name="AER"; version="1.2-9"; sha256="03al0jfxdbi8sqkav7gz3aqbxm32qjdnh4l93vy1jr3n2h5kjy9v"; depends=[car Formula lmtest sandwich survival zoo]; }; AF = derive2 { name="AF"; version="0.1.5"; sha256="1r87ra55g0qm2s8cgsmdwck93ia2vr8zfab3in45mxm5xc501xgk"; depends=[data_table drgee ivtools stdReg survival]; }; AFM = derive2 { name="AFM"; version="1.2.6"; sha256="0yngk3j1wkamqzrwibn2csbn61jbdb872n0gi4d3hyhgilqzwbwf"; depends=[data_table dbscan fftwtools fractaldim ggplot2 gridExtra gstat igraph mixtools moments plyr png pracma rgl scales shiny shinyjs sp stringr]; }; AFheritability = derive2 { name="AFheritability"; version="0.1.0"; sha256="03w0a4z2x539ykyzdxm1mfqkhzz03cg0aqvgi062jrrm5m6f57ix"; depends=[ggplot2 mvtnorm reshape2 shiny]; }; AGD = derive2 { name="AGD"; version="0.39"; sha256="0hmq684snnffc2v7vmns4ky200a6zh1ggiap03n5cvpb3nlqc6lr"; depends=[gamlss gamlss_dist]; }; AGHmatrix = derive2 { name="AGHmatrix"; version="1.0.2"; sha256="0qipqk8p80463hfkbjnkw8ivziqj2xb15l54x52kcgbd9hl4zami"; depends=[Matrix zoo]; }; AGSDest = derive2 { name="AGSDest"; version="2.3.2"; sha256="0f3qchvdi2n1cr8ipjj332dw8hdza58dvfk21p0c6bhmxzg7f71i"; depends=[ldbounds]; }; - AGread = derive2 { name="AGread"; version="1.0.0"; sha256="0z0c43m7sgw9qfwmr9jv6ppx2zvrm3mpb5gljg5bvv5gd3cfxbpy"; depends=[anytime binaryLogic data_table DescTools dplyr GGIR lubridate magrittr PAutilities Rcpp rlang seewave stringr]; }; + AGread = derive2 { name="AGread"; version="1.1.1"; sha256="0ar0cnlaxxmvn2gdydmm9vr45xjhx06kky556d17l93k0xwfvzm3"; depends=[anytime binaryLogic data_table DescTools dplyr GGIR lubridate magrittr PAutilities Rcpp reshape2 rlang seewave stringr]; }; AHM = derive2 { name="AHM"; version="1.0.1"; sha256="00r1rn7d64a18rckbxvla5yapqv00p9ajxv72fx7s6p80kfal89w"; depends=[devtools dplyr glmnet Matrix mixexp plgp quadprog tibble tidyr]; }; AHMbook = derive2 { name="AHMbook"; version="0.1.4"; sha256="1cxyk420pzhh1scagxjmpm328xrcc1mpdrrch92yfgbgx09zkr4c"; depends=[coda plotrix RandomFields raster sp unmarked]; }; - AHR = derive2 { name="AHR"; version="1.5.0"; sha256="0sscw80cz4r1xmdymp9knz0dfans7yzwjwklv7ahafxlflw5527h"; depends=[etm MASS Rcpp RcppArmadillo survival]; }; AICcmodavg = derive2 { name="AICcmodavg"; version="2.2-2"; sha256="0kpdl31wmwk5i4cqcwlm66c9s0c2b793army9dx50hdgrrzqc0na"; depends=[lattice MASS Matrix nlme survival unmarked VGAM xtable]; }; AID = derive2 { name="AID"; version="2.5"; sha256="0il6qjv1gcbxdf1lknsfij4vxzc31qyp359abqzdvkzyxwgbbzsy"; depends=[ggplot2 MASS nortest psych tseries]; }; AIG = derive2 { name="AIG"; version="0.1.9"; sha256="1jnnfmcwxcv4fsdcz7jb2lgczxdwrq3qxg2bhsh1610iwz4gzii7"; depends=[dplyr magrittr mgcv rgl]; }; @@ -58,16 +56,16 @@ in with self; { ALTopt = derive2 { name="ALTopt"; version="0.1.2"; sha256="1nbbvniramajg6k83xqgx7r0abjrfja8zz0y3g3j8qmvbcqmjx13"; depends=[cubature lattice]; }; ALassoSurvIC = derive2 { name="ALassoSurvIC"; version="0.1.0"; sha256="0q02rz947bp6i7sbb5nzxq8ky74iprdnpbwnmnn7vg29vhca4b09"; depends=[Rcpp]; }; AMAP_Seq = derive2 { name="AMAP.Seq"; version="1.0"; sha256="0z0rrzps6rm58k4m1ybg77s3w05m5zfya4x8ril78ksxsjwi3636"; depends=[]; }; - AMCP = derive2 { name="AMCP"; version="0.0.4"; sha256="051xvnr4zc25w00kh4gkffgigmhmcbqpwh9654jv37glr8ip2v3l"; depends=[]; }; + AMCP = derive2 { name="AMCP"; version="1.0.0"; sha256="0qb5vcg351jd0ss17zqx6vvyin38qr4dbvc05xc5z8rbca8z6cap"; depends=[]; }; AMCTestmakeR = derive2 { name="AMCTestmakeR"; version="1.0.0"; sha256="1vgncc61gmqhax2a7072jb36bzkycv80xqihkr5qs8jxnqqkndxd"; depends=[]; }; AMGET = derive2 { name="AMGET"; version="1.0"; sha256="18wdzzg5wr7akbd1iasa4mvmy44fb2n5gpghwcrx80knnicy3dxq"; depends=[]; }; AMIAS = derive2 { name="AMIAS"; version="1.1.0"; sha256="08scimlbr22cjr6fqi13rsvpc52sp4psnhrwir5pfl6qcpl1k22j"; depends=[limSolve Matrix zoo]; }; AMModels = derive2 { name="AMModels"; version="0.1.4"; sha256="18h075bzk8s75b3zmjd0x8c6dpl40445d4kv8n0p4ldnx80b1aha"; depends=[unmarked]; }; AMOEBA = derive2 { name="AMOEBA"; version="1.1"; sha256="1npzh3rpfnxd4r1pj1hm214sfgbw4wmq4ws093lnl7pvsl0q37xn"; depends=[rlecuyer snowfall spdep]; }; - AMORE = derive2 { name="AMORE"; version="0.2-15"; sha256="00zfqcsah2353mrhqkv8bbh24l8gaxk4y78icr9kxy4pqb2988yz"; depends=[]; }; + AMORE = derive2 { name="AMORE"; version="0.2-16"; sha256="0vw6hhykg1r6xxja6d4zb2y00x7pfkmhcq9xkidz8p4arinb7xnl"; depends=[]; }; AMPLE = derive2 { name="AMPLE"; version="0.0.2"; sha256="0j19f8rl7gkads4n52l5gfc5k7dx27sswzrypwl7dnxhfp4ivql7"; depends=[dplyr ggplot2 shiny shinyjs tidyr wesanderson]; }; - AMR = derive2 { name="AMR"; version="0.9.0"; sha256="14y7ghqhx3apc2ad4lbjd2swzwgw1qzj0scdgx8jq4b2cv4z2gz6"; depends=[backports cleaner crayon data_table dplyr ggplot2 knitr microbenchmark pillar rlang tidyr]; }; - ANN2 = derive2 { name="ANN2"; version="2.3.2"; sha256="0ib6cs2az0hhfg7vj4dk6fxbwjlc305psqjs188fdya2jrxgq1gs"; depends=[ggplot2 Rcpp RcppArmadillo reshape2 testthat viridisLite]; }; + AMR = derive2 { name="AMR"; version="1.0.1"; sha256="06sqrwxd0zhp2i2shvq0lbh8arvvlfqymcf1jckgpsxidygr3j1q"; depends=[backports cleaner crayon data_table dplyr ggplot2 knitr microbenchmark pillar rlang tidyr]; }; + ANN2 = derive2 { name="ANN2"; version="2.3.3"; sha256="12l02fnnfa42qy4w1bv2zr963k61xn7mbpj9rycdzi8wl18hxrb8"; depends=[ggplot2 Rcpp RcppArmadillo reshape2 testthat viridisLite]; }; ANOM = derive2 { name="ANOM"; version="0.5"; sha256="14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; }; ANOVA_TFNs = derive2 { name="ANOVA.TFNs"; version="1.0"; sha256="0dwspvxj2gzyvxsd9xyhv47n1hjlqa7z9qza4h3hn1xda12vkjly"; depends=[FuzzyNumbers]; }; ANOVAIREVA = derive2 { name="ANOVAIREVA"; version="0.1.0"; sha256="04z2g79nnh5yhn4aqw0i7ck2b1z5dbasf1zp1sj6rjjrp9aqmaa6"; depends=[car dplyr ggplot2 plotly rmarkdown shiny]; }; @@ -82,6 +80,7 @@ in with self; { APSIMBatch = derive2 { name="APSIMBatch"; version="0.1.0.2374"; sha256="0j44ijq1v1k60lka9nmw8m1jfjw7pidny9bvswqy5v82gzmwl29d"; depends=[]; }; APfun = derive2 { name="APfun"; version="0.1.4"; sha256="0k4m3zwxcjfb1y4njig6yyjqzsvqi99zmglbfpvp65s829zxd881"; depends=[maptools raster rgdal sp]; }; APtools = derive2 { name="APtools"; version="6.8.8"; sha256="171aydyd7s8qll7djl4ysy596wxdf5wfwpqwfi14jjglc9r9qrrr"; depends=[cmprsk survival]; }; + AQuadtree = derive2 { name="AQuadtree"; version="1.0.0"; sha256="159p1cymvgf8grpnkgkf6nind2kv6c62aa96qb32aiayrgrm4y4c"; depends=[dplyr sp]; }; AR = derive2 { name="AR"; version="1.1"; sha256="1wn4g2997c4vc3mzq2pv8ld0ryp0i78v4zlqqryvhshxgnz4f2pr"; depends=[DISTRIB]; }; AR1seg = derive2 { name="AR1seg"; version="1.0"; sha256="0v9adx5wj9r4jwl3bqqmj0byiqfp585jz013qfqrq601wj8v4zi3"; depends=[Segmentor3IsBack]; }; ARCensReg = derive2 { name="ARCensReg"; version="2.1"; sha256="05zjk1wxqfigzg80lvx1940a059jfdr9zbzgzmz2n01glj1lvj63"; depends=[msm mvtnorm numDeriv tmvtnorm]; }; @@ -91,7 +90,6 @@ in with self; { ARPobservation = derive2 { name="ARPobservation"; version="1.2.0"; sha256="1kgflalpymbsfzwg4c70mdxgrbsg8r8z44433v3y9rymhfyq9nmj"; depends=[]; }; ART = derive2 { name="ART"; version="1.0"; sha256="186w1ivj5v3h906crl953qxgai5wiznaih83dgvwgnmabs9p1wvk"; depends=[car]; }; ARTIVA = derive2 { name="ARTIVA"; version="1.2.3"; sha256="1jdvsslc8parz7wibcv51fx62brl2mc6i482hz43j1npsms2z1hl"; depends=[gplots igraph MASS]; }; - ARTP = derive2 { name="ARTP"; version="2.0.5"; sha256="0lwvhf5lamw28sd41vrhyin8ab92rl93j1ahk0aacwvnikgmfkpj"; depends=[]; }; ARTP2 = derive2 { name="ARTP2"; version="0.9.45"; sha256="12nqxry2jkl1n07rbms38mrnp39cn00d0h272d9f1z5x883flv62"; depends=[data_table Formula]; }; ARTool = derive2 { name="ARTool"; version="0.10.6"; sha256="1wln9s3j3bs5svykp3as483q61fvlfsdcjlb8cs3mzw43nlp591i"; depends=[car dplyr lme4 magrittr plyr]; }; ARpLMEC = derive2 { name="ARpLMEC"; version="1.0"; sha256="0irgyf8acg1qn60npchvs258d0cf6cxm53xw0s8qg8iyqns52p75"; depends=[gmm lmec MASS Matrix mnormt mvtnorm numDeriv sandwich tmvtnorm]; }; @@ -109,6 +107,7 @@ in with self; { AUC = derive2 { name="AUC"; version="0.3.0"; sha256="0ripcib2qz0m7rgr1kiz68nx8f6p408l1ww7j78ljqik7p3g41g7"; depends=[]; }; AUCRF = derive2 { name="AUCRF"; version="1.1"; sha256="00d7jcg2dyvf7sc9w7vxxd85m7nsbcmfqsavrv236vxfpfc9yn7i"; depends=[randomForest]; }; AUtests = derive2 { name="AUtests"; version="0.98"; sha256="0m2nl55qfwfzlf92f43b9q75xqvrlx7qzcz6qlnjbjcr80s0qj9q"; depends=[logistf]; }; + AWAPer = derive2 { name="AWAPer"; version="0.1.3"; sha256="0v753kp4acjhhfyq9492sr7x9931cq3i774yva322x4dskvk8n2w"; depends=[chron Evapotranspiration maptools ncdf4 R_utils raster sp zoo]; }; AWR = derive2 { name="AWR"; version="1.11.189"; sha256="0q9ss6cyx8vv85zif5v4s2bkv0amhyvzbs41mjjgmwb1csg53jgd"; depends=[rJava]; }; AWR_Athena = derive2 { name="AWR.Athena"; version="2.0.7-0"; sha256="1j9bqhyk0jzry4g379ml65gwxlszn7pjif1dywgns98jbry8mavh"; depends=[rJava RJDBC]; }; AWR_KMS = derive2 { name="AWR.KMS"; version="0.1"; sha256="00aqhyqlncsv0vfcyhaazxaclwm63v5kscssash7529avdwd4gqg"; depends=[AWR jsonlite rJava]; }; @@ -119,8 +118,8 @@ in with self; { AcceptanceSampling = derive2 { name="AcceptanceSampling"; version="1.0-6"; sha256="1z3rmln63ki2kik9kinbwr9qhr32ggbmh4mm3xqy6di119n47ca9"; depends=[]; }; AcousticNDLCodeR = derive2 { name="AcousticNDLCodeR"; version="1.0.2"; sha256="1fgzgwanpv2pzy74xdk3hamc44p8qch467wh163dxby8jr9ik0sb"; depends=[seewave tuneR zoo]; }; AcrossTic = derive2 { name="AcrossTic"; version="1.0-3"; sha256="03180h79jhjd66ibrnsfp3yyp2jlfysp7cymw46phzj2palghsc0"; depends=[lpSolve treeClust]; }; - ActFrag = derive2 { name="ActFrag"; version="0.1.0"; sha256="06l5a679j6289008ls57v420mnzpq9a4ln7svi5bh0vpvws7sr9d"; depends=[accelerometry dplyr ineq survival tidyr]; }; - Actigraphy = derive2 { name="Actigraphy"; version="1.3.2"; sha256="0y0ccmxhdfhdmi4k6pbfvnqknkqbgvfsf2qf7z7rc4xpfgym6574"; depends=[fda SDMTools]; }; + ActFrag = derive2 { name="ActFrag"; version="0.1.1"; sha256="08r3gwjz4fkyy85dxqix0ffm5xyq45032qv3snnzxnlqxslxbqn1"; depends=[accelerometry dplyr ineq survival tidyr]; }; + Actigraphy = derive2 { name="Actigraphy"; version="1.4.0"; sha256="0bpmvszzv5fm72nar3wgnmfl5am7znqfajmlbv38ihkbi7jbwk20"; depends=[fda]; }; ActiveDriver = derive2 { name="ActiveDriver"; version="1.0.0"; sha256="10c7ga48fwvpd5mc4dqiyw4kc2l0iz5qn4hg7xk15r1qmm5rsipa"; depends=[MASS]; }; ActiveDriverWGS = derive2 { name="ActiveDriverWGS"; version="1.0.1"; sha256="08l9dj8d3cd74z1dqn8n4yqykwvqjxsfa067wnxyh7xnfvvnm5v1"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicRanges IRanges plyr S4Vectors]; }; ActivePathways = derive2 { name="ActivePathways"; version="1.0.1"; sha256="1xb0d1svmzw404pv8ja6wr4773k7x2lxkrzrayilvzqbfzj1wx20"; depends=[data_table ggplot2 metap]; }; @@ -131,7 +130,7 @@ in with self; { AdapSamp = derive2 { name="AdapSamp"; version="1.1.1"; sha256="1jayjrsiib2ij4rxxj59g71r3xhzl5yqh0lhi8k6cfy03i7dkvis"; depends=[pracma]; }; AdaptFit = derive2 { name="AdaptFit"; version="0.2-2"; sha256="124lj1sq5cbp35z4ybkc7ci3fi6pgf8pc5k9mpqmyb6dj870q836"; depends=[cluster MASS nlme SemiPar]; }; AdaptFitOS = derive2 { name="AdaptFitOS"; version="0.67"; sha256="0s8vv960pkbccpwlfsg1jsfjnfmq9iy8cj1fak5fn2s60zb7nm0a"; depends=[MASS mgcv nlme SemiPar]; }; - AdaptGauss = derive2 { name="AdaptGauss"; version="1.5.4"; sha256="16p5q5lqq7ys1v4ciiqsp4sw8wlr0w8rjwibr0qgvvdp2wv0lmzd"; depends=[DataVisualizations ggplot2 pracma Rcpp shiny]; }; + AdaptGauss = derive2 { name="AdaptGauss"; version="1.5.6"; sha256="076jjnqp4ayq4kh95qns4kfzfvl6mjllhsq6hfp66bww7w976xxh"; depends=[DataVisualizations pracma Rcpp shiny]; }; AdaptiveSparsity = derive2 { name="AdaptiveSparsity"; version="1.6"; sha256="0imr5m8mll9j6n4icsv6z9rl5kbnwsp9wvzrg7n90nnmcxq2cz91"; depends=[MASS Matrix Rcpp RcppArmadillo]; }; AdequacyModel = derive2 { name="AdequacyModel"; version="2.0.0"; sha256="0amp6ic1wylk24sp9wpx3ci38njj7b9qjqfp89j39hkl6kc1q7sq"; depends=[]; }; AdhereR = derive2 { name="AdhereR"; version="0.5"; sha256="0wma06v02k50j0j8j5k1py3y6mwl8q7bsb288gyn67ms9wgv4fb5"; depends=[clipr colourpicker data_table DBI haven highlight knitr lubridate manipulate readODS readxl RMariaDB RSQLite scales shiny shinyjs shinyWidgets V8 viridisLite]; }; @@ -147,7 +146,7 @@ in with self; { AlgebraicHaploPackage = derive2 { name="AlgebraicHaploPackage"; version="1.2"; sha256="1krm5cx609sv2p0g3xm5jaiqs9li06v717lw7ywjvx7myc9x4c07"; depends=[]; }; AllPossibleSpellings = derive2 { name="AllPossibleSpellings"; version="1.1"; sha256="0ksfm2pfjka3yjgcd257v7sns1niaylsfxvhhh2jwdi016cpdw10"; depends=[]; }; AlleleRetain = derive2 { name="AlleleRetain"; version="2.0.2"; sha256="0b6h5giskqbjbrk8nf29i75wrhxsjw1c87laiqzrpbp9n717bl20"; depends=[]; }; - AlphaPart = derive2 { name="AlphaPart"; version="0.7.0"; sha256="1bqwbjqmazjgmdpk5s0i3dl4hb3qhz2sy1drhazmgdxhf5qwsq85"; depends=[directlabels gdata ggplot2 pedigree quadprog Rcpp reshape]; }; + AlphaPart = derive2 { name="AlphaPart"; version="0.8.0"; sha256="1qlawr2mdfhwlx9bdx4idr8qk75vpmpidar175iim6fbhrxhhjb8"; depends=[directlabels gdata ggplot2 pedigree Rcpp reshape]; }; AlphaSimR = derive2 { name="AlphaSimR"; version="0.11.1"; sha256="0j8sw9pcxc1qbv6phcs92inyx6hwdfy05ww0y1a5dga39lap1r57"; depends=[BH R6 Rcpp RcppArmadillo]; }; AlphaVantageClient = derive2 { name="AlphaVantageClient"; version="0.0.1"; sha256="095m850v945lw7i3qd812p28srdb5hdk9h52zf6bkr166zai1ni0"; depends=[httr xts]; }; Amelia = derive2 { name="Amelia"; version="1.7.6"; sha256="1shvc8x1kmb0cincgggsv5c5w25k36kqvisdqd3ayy5g98vqvh33"; depends=[foreign Rcpp RcppArmadillo]; }; @@ -185,20 +184,18 @@ in with self; { ArgumentCheck = derive2 { name="ArgumentCheck"; version="0.10.2"; sha256="0mgx7mzbg2wynixcf9hvs0i9p4zka7c3chrfvjmvvvwwgsy24hkc"; depends=[]; }; Arothron = derive2 { name="Arothron"; version="1.1.1"; sha256="18vman573mss704v5rqa13vq5nwlbdrg1j5b4wc441782znm34y3"; depends=[abind alphashape3d compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; ArrayBin = derive2 { name="ArrayBin"; version="0.2"; sha256="0jlhcv2d7pmqi32w71nz063ri1yj4i4isr3msnw7ckzvi9r42jwm"; depends=[SAGx]; }; - AsioHeaders = derive2 { name="AsioHeaders"; version="1.12.1-1"; sha256="0phcagfjxrakkap0kffclcqjspb2rmhq81k934mxgh1qz5a68ksv"; depends=[]; }; - AssayCorrector = derive2 { name="AssayCorrector"; version="2.0.0"; sha256="0d2444if5hyfbzyminnspw686r5l4pf9cdj9k48n2539vd61k452"; depends=[kSamples lattice latticeExtra RColorBrewer RVAideMemoire]; }; + AsioHeaders = derive2 { name="AsioHeaders"; version="1.12.2-1"; sha256="0ibbw8njqq53d2gvwh604xkmkjc02zf8z30gm0a1d6cx82n0w8h8"; depends=[]; }; AssetCorr = derive2 { name="AssetCorr"; version="1.0.3"; sha256="0xcyj9xw895p4j03j9c76k7ylhkmf777akg4m90av12ad05njjbv"; depends=[boot ggplot2 mvQuad mvtnorm numDeriv Rdpack VineCopula]; }; AssetPricing = derive2 { name="AssetPricing"; version="1.0-1"; sha256="0pbb1362dgdipbj3h50ykissl3gdqf1j1mpq53ixprvyc966c5h4"; depends=[deSolve polynom]; }; AssocAFC = derive2 { name="AssocAFC"; version="1.0.2"; sha256="1rjiiir472dnr15xyvpn81s62nf01gl70khr8mrni65ssp5m30fb"; depends=[CompQuadForm]; }; AssocTests = derive2 { name="AssocTests"; version="0.0-4"; sha256="1fhqzbj4aj4srkiba79w8wdyc7yy701izklxqqa7lsifnca6gn4j"; depends=[cluster combinat fExtremes mvtnorm]; }; AssotesteR = derive2 { name="AssotesteR"; version="0.1-10"; sha256="0aysilg79vprcyjirqz6c5s1ry1ia92xik3l38qrw1gf3vfli9cw"; depends=[mvtnorm]; }; - AsyK = derive2 { name="AsyK"; version="1.5.3"; sha256="0pa8j757kvb82n1hn2npvv3yam0s1l3mgd7130kz7pas2gkwwy5n"; depends=[decon ICV kedd kerdiest KernSmooth ks locfit OSCV sm]; }; + AsyK = derive2 { name="AsyK"; version="1.5.4"; sha256="0l2d6h1i5bvxizvcjq15z0dhq274qz07fq6hh4j6d6ifm0z34829"; depends=[decon ICV kedd kerdiest KernSmooth ks locfit OSCV sm]; }; AsynchLong = derive2 { name="AsynchLong"; version="2.1"; sha256="111kg1cacqlz4df1lnijybnrifjscjm78ji9p0ia615gacvdcfxa"; depends=[]; }; AtelieR = derive2 { name="AtelieR"; version="0.24"; sha256="0yialpmbsbx70gvps4r58xg9wvqcril8j8yd61lkkmz4b3195zai"; depends=[cairoDevice gWidgetsRGtk2 partitions proto]; }; AtmRay = derive2 { name="AtmRay"; version="1.31"; sha256="162078jd032i72sgaar9hqcnn1lh60ajcqpsz4l5ysxfkghcxlh8"; depends=[]; }; AurieLSHGaussian = derive2 { name="AurieLSHGaussian"; version="0.2.0"; sha256="0dzwqv396inbx4r6758vr4gip1y42ahavspadgm4xhafvipg73rb"; depends=[flexclust igraph lsa reshape2 stringdist]; }; AutoDeskR = derive2 { name="AutoDeskR"; version="0.1.3"; sha256="1n7c8ris8b517bs1wahpvrhwfbvn2q4jbq01kgiv9lfmkjckzfkc"; depends=[httr jsonlite shiny]; }; - AutoModel = derive2 { name="AutoModel"; version="0.4.9"; sha256="07wpdf5b1z6lk69nqybzx333zc57wbnga6dp0vkf1d50hxmpd9yc"; depends=[aod BaylorEdPsych broom car dplyr gtools lmtest MASS ROCR rowr]; }; AutoPipe = derive2 { name="AutoPipe"; version="0.1.6"; sha256="0bzllh92fgsmz79lh6m2f10vsx5qng4l7bwbwkp2kzwnncy7cq63"; depends=[annotate cluster clusterProfiler ConsensusClusterPlus fgsea msigdbr org_Hs_eg_db pamr RColorBrewer Rtsne siggenes]; }; AutoSEARCH = derive2 { name="AutoSEARCH"; version="1.5"; sha256="1s2ldhxijd8n9ba78faik6gn4f07pdzksy0030pqyafxlr3v1qdj"; depends=[lgarch zoo]; }; AutoStepwiseGLM = derive2 { name="AutoStepwiseGLM"; version="0.2.0"; sha256="0wwi8hg2q1zkf28rq7bj0f9fcxc5hj59hkmk0gl9p8i3rghlyrms"; depends=[caret formula_tools]; }; @@ -206,16 +203,15 @@ in with self; { AutoregressionMDE = derive2 { name="AutoregressionMDE"; version="1.0"; sha256="1dmg0q4sp2d2anzhw2my8xjhpyjsx0kf7r202q5bkw8yr57jnhvr"; depends=[]; }; AzureAuth = derive2 { name="AzureAuth"; version="1.2.3"; sha256="0vi5888qvsmdwvzz46wabg2244liwfzyjd13h1d3wvbarzy7m8wf"; depends=[httr jose jsonlite openssl R6 rappdirs]; }; AzureCognitive = derive2 { name="AzureCognitive"; version="1.0.0"; sha256="1yg8fq77fbgf21dg9zq7kkgqyx6ax9ma46yv1nhnvdhc3dpvax5a"; depends=[AzureAuth AzureRMR httr jsonlite]; }; - AzureContainers = derive2 { name="AzureContainers"; version="1.2.0"; sha256="1mr1xpb1wl8khzhi6hcbfvxmn7jc1p4n7m76rc13axjgv6cb00zr"; depends=[AzureGraph AzureRMR httr openssl processx R6]; }; + AzureContainers = derive2 { name="AzureContainers"; version="1.2.1"; sha256="0ihs0wv91y1klzwcbfy44yx12l8rxpa4g2vm2dbd7g9pz172w7hl"; depends=[AzureGraph AzureRMR httr openssl processx R6]; }; AzureGraph = derive2 { name="AzureGraph"; version="1.1.0"; sha256="0b7bfzvv0115giahs12b0h4qq4fdc5qf5kc8hmvjca6jlgysgvf4"; depends=[AzureAuth httr jsonlite openssl R6]; }; AzureKeyVault = derive2 { name="AzureKeyVault"; version="1.0.3"; sha256="06lz7cg3f9qrl9nzi54fsx37gm517skjl0jn1fwq4s4b07p4klia"; depends=[AzureAuth AzureGraph AzureRMR httr jose jsonlite openssl R6]; }; - AzureKusto = derive2 { name="AzureKusto"; version="1.0.4"; sha256="14gp9qif8p6h7dnw5isls2kvlf77bz3lwr15by2cpa0w5rvzamaj"; depends=[AzureAuth AzureRMR DBI dplyr httr jsonlite openssl R6 rlang tibble tidyselect]; }; - AzureRMR = derive2 { name="AzureRMR"; version="2.3.0"; sha256="01yj145897v2017asy31rxmkzng7zv1r6avnp2c8vl707cd7afd5"; depends=[AzureAuth AzureGraph httr jsonlite R6 uuid]; }; - AzureStor = derive2 { name="AzureStor"; version="3.1.0"; sha256="0wnb7mrchcd3s6zs6ry09xzsvsvgb3s95gagvsprns7y0adgb85m"; depends=[AzureRMR httr mime openssl R6 xml2]; }; - AzureVM = derive2 { name="AzureVM"; version="2.1.0"; sha256="0vb295kcz7j53xhzgsril56b4l8d69jyvkni67bqk8cxxh4qvsgx"; depends=[AzureRMR jsonlite R6]; }; + AzureKusto = derive2 { name="AzureKusto"; version="1.0.5"; sha256="0xzrhqysazcwwp5ismf6pi0kyyncwwp4a0p9s47m0gm8fyhz1h7g"; depends=[AzureAuth AzureRMR DBI dplyr httr jsonlite openssl R6 rlang tibble tidyselect]; }; + AzureRMR = derive2 { name="AzureRMR"; version="2.3.1"; sha256="0i00fkmyh25pih6cjcsxabz2rmpgpvzc708yk98jh89yz8cwxkmy"; depends=[AzureAuth AzureGraph httr jsonlite R6 uuid]; }; + AzureStor = derive2 { name="AzureStor"; version="3.1.1"; sha256="0la91z2d8qnvxar1y3mj8kpg0a44qr8slljaig6padv2wq16xals"; depends=[AzureRMR httr mime openssl R6 xml2]; }; + AzureVM = derive2 { name="AzureVM"; version="2.1.1"; sha256="0kls78lbyp5i0dg3a7nz183r7chw1hhwzqyvmp27jhihazls90ij"; depends=[AzureRMR jsonlite R6]; }; AzureVMmetadata = derive2 { name="AzureVMmetadata"; version="1.0.0"; sha256="0k99ncp9zkyxl0r51041rfgq49gb65f5d3yc89d1gg2aqavk3g2y"; depends=[httr openssl]; }; AzureVision = derive2 { name="AzureVision"; version="1.0.0"; sha256="1mvnq65sh3kgxfwxvfp26vv0nwa3xldkp65ya4mm0rqxr4zm3h4w"; depends=[AzureCognitive AzureRMR httr]; }; - B2Z = derive2 { name="B2Z"; version="1.4"; sha256="0w7394vs883vb32gs6yhrc1kh5406rs851yb2gs8hqzxad1alvpn"; depends=[coda mvtnorm numDeriv]; }; BACA = derive2 { name="BACA"; version="1.3"; sha256="1vbip7wbzix1s2izbm4058wmwar7w5rv3q8bmj9pm7hcapfi19k0"; depends=[ggplot2 RDAVIDWebService rJava]; }; BACCO = derive2 { name="BACCO"; version="2.0-9"; sha256="0i1dnk0g3miyv3b60rzgjjm60180wxzv6v2q477r71q74b0v0r1y"; depends=[approximator calibrator emulator]; }; BACCT = derive2 { name="BACCT"; version="1.0"; sha256="0bpm4l27vbblzi2hhfbjw2af3ic2jbnyghkvchpq8ww43k8068iv"; depends=[ggplot2 reshape2 rjags]; }; @@ -229,6 +225,8 @@ in with self; { BAMMtools = derive2 { name="BAMMtools"; version="2.1.7"; sha256="1xpks3in0mj1b82z3ax2k3q06bgr3sj0nhr2dbs2crbvszb8hcp2"; depends=[ape gplots Rcpp]; }; BANEScarparkinglite = derive2 { name="BANEScarparkinglite"; version="0.1.3"; sha256="0z2n4ikj9cr2vcafpn0kmn5v24pdy7cd98asdy7njg5l54hajsxc"; depends=[dplyr httr lubridate RCurl readr rvest XML xml2]; }; BANOVA = derive2 { name="BANOVA"; version="1.1.6"; sha256="07lxnklz8a2jrrmljhngs1zdrasl7fmn8n60rp8ns394ar7w640m"; depends=[coda rjags rstan runjags]; }; + BAREB = derive2 { name="BAREB"; version="0.1.0"; sha256="1h3bgfxbs489cywgblrpl8jjhgs1krimdvv6fryjnc9rhw1mymdr"; depends=[Rcpp RcppArmadillo]; }; + BARIS = derive2 { name="BARIS"; version="1.0.0"; sha256="15bydzp1mldp2zxl343qd1fygah6cj1iavwxb0zddzjzgksnn3y9"; depends=[data_table downloader dplyr httr janitor jsonlite magrittr memoise rgdal rio sf stringi stringr XML]; }; BART = derive2 { name="BART"; version="2.7"; sha256="16klaqzp525da6swlcdcr13mjlm88zpqyqnzjk6l4nlcwa3b7z1m"; depends=[nlme nnet Rcpp survival]; }; BAS = derive2 { name="BAS"; version="1.5.5"; sha256="1iakx36r4lnl6xs77m9mfcj5w3mb4g482s2mpzq65v69k10nj8lj"; depends=[]; }; BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; }; @@ -237,13 +235,13 @@ in with self; { BAT = derive2 { name="BAT"; version="2.0.0"; sha256="0fwyarkgxxgckaky2wjf311ymlh78942j51a2dvjkwlbshcdqbij"; depends=[hypervolume nls2 raster spatstat vegan]; }; BAYESDEF = derive2 { name="BAYESDEF"; version="0.1.0"; sha256="030xskgqqg0n85mphjv32ks4ysvxb36f6ayy0176gps14jhmhcp7"; depends=[glmnet gWidgets readxl REdaS]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; - BAwiR = derive2 { name="BAwiR"; version="1.2"; sha256="0j4vrngfddil4wyaskc0cgqhk496hq7wkrj85hxh76kn85gmfmiv"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tidyr xml2]; }; + BAwiR = derive2 { name="BAwiR"; version="1.2.1"; sha256="088d0mpd8nhfbyqck7d9wgls1ygawphh9jpp0jadn4dvkan6d2y8"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tidyr xml2]; }; BB = derive2 { name="BB"; version="2019.10-1"; sha256="0kf9sfsm3n036a8a8gjfpc9qdryvadb019kqjh80n1szdv7bdl04"; depends=[quadprog]; }; BBEST = derive2 { name="BBEST"; version="0.1-6"; sha256="1hvgi3679ixpq0c5qbxhkp1j0953k3lklglgxrq9mz2ry6z9n038"; depends=[DEoptim ggplot2 reshape2 shiny wmtsa]; }; BBI = derive2 { name="BBI"; version="0.3.0"; sha256="167sndfp3776p8n9zdpihc9xhqqi8wygzpl49dzkfj53gwa77rnn"; depends=[vegan]; }; BBMM = derive2 { name="BBMM"; version="3.0"; sha256="1cvv786wf1rr5906qg1di2krrv5jgw3dnyl8z2pvs8jyn0kb3fkj"; depends=[]; }; BBMV = derive2 { name="BBMV"; version="2.1"; sha256="11d4wd1zx99hrhwagw73jkk088rz5vgkjml6mckssc2iqvhj1dc9"; depends=[ape]; }; - BBRecapture = derive2 { name="BBRecapture"; version="0.1"; sha256="05xzp5zjmkh0cyl47qfsz0l8drg8mimssybhycc4q69aif9scqxb"; depends=[HI lme4 locfit secr]; }; + BBRecapture = derive2 { name="BBRecapture"; version="0.2"; sha256="1w0m8p4mwjsycv9krmsgdyjckic2nwxbyhrz1s2gng2v1h20zvlf"; depends=[HI lme4 locfit secr]; }; BBmisc = derive2 { name="BBmisc"; version="1.11"; sha256="1lh1n4bvxzivb5rbz69mvd8xdgr3gr2bnqd68a39sd1530l8r90y"; depends=[checkmate]; }; BCA = derive2 { name="BCA"; version="0.9-3"; sha256="0ksd6b0ykydgdn33x29bwwqkrp23cvdj3imps0l6qs1p4465j5nf"; depends=[car clv flexclust Rcmdr RcmdrMisc rpart]; }; BCA1SG = derive2 { name="BCA1SG"; version="0.1.0"; sha256="14jvi5gn19f72szcnyhfpdld00cc7gyih5qrm4bpzvp553f1svvk"; depends=[logOfGamma Matrix]; }; @@ -253,7 +251,7 @@ in with self; { BCE = derive2 { name="BCE"; version="2.1"; sha256="0dqp08pbq7r88yhvlwgzzk9dcdln7awlliy5mfq18j5jhiy7axiz"; depends=[FME limSolve Matrix]; }; BCEA = derive2 { name="BCEA"; version="2.3-1.1"; sha256="0ppjcbcapmg6j5gdalw1j86w50xwaanvhld9zpzp5fvj8b7f016b"; depends=[dplyr MASS rlang]; }; BCEE = derive2 { name="BCEE"; version="1.2"; sha256="08jsnsy7l182n0gy2jy0l9a7grr62g57gz3217fzapk2im2q648b"; depends=[BMA leaps Rcpp RcppArmadillo]; }; - BCHM = derive2 { name="BCHM"; version="0.96"; sha256="1zmv6ghg76pdd98qngvkr9814sjq4ah5h0g2z6ch5fnvwry0r2bv"; depends=[cluster clValid coda crayon knitr plyr rjags]; }; + BCHM = derive2 { name="BCHM"; version="0.99"; sha256="1az0njkq30762n5khbm6hlj1knqi4sp723qihwnmkgn8cai130y3"; depends=[cluster coda crayon knitr plyr rjags]; }; BCRA = derive2 { name="BCRA"; version="2.1"; sha256="0n1f2qcwca7lb90qmim5dc3wj3hf5b31nh0xiw64k1cv8lhqc0mz"; depends=[]; }; BCSub = derive2 { name="BCSub"; version="0.5"; sha256="0c8dlxsx23qfyygmajg2amj78ax01kb3808d9hvy7g3hkgp2i2fp"; depends=[MASS mcclust nFactors Rcpp RcppArmadillo]; }; BCellMA = derive2 { name="BCellMA"; version="0.3.4"; sha256="1njprs7ksv0w18ffs0agz0290aa2akw48225iaa3bjhbl08dpidl"; depends=[ggplot2 reshape2]; }; @@ -266,16 +264,16 @@ in with self; { BE = derive2 { name="BE"; version="0.1.1"; sha256="1ldzj1fvbgmnp0cn7g348md2xskm2q5b7y6l1sm3pa2am8jc7ixa"; depends=[rtf]; }; BEACH = derive2 { name="BEACH"; version="1.3.1"; sha256="0biq6c74k8vb8ykafzf3blyi08rp65x1vaw3bfpwdc1ihc9wrgjr"; depends=[devtools DT haven plyr rJava rtf sas7bdat shiny WriteXLS xtable]; }; BEDASSLE = derive2 { name="BEDASSLE"; version="1.5"; sha256="1bz3lr0waly9vj9adwhmgs3lq7zjdkcbvm3y9rnn72qlrwmv5fbn"; depends=[emdbook MASS matrixcalc]; }; - BEDMatrix = derive2 { name="BEDMatrix"; version="2.0.1"; sha256="03jf8k1sa43ddb6m07g78r1z3rx8aznywmwllsivi674am0qk1qj"; depends=[crochet]; }; + BEDMatrix = derive2 { name="BEDMatrix"; version="2.0.2"; sha256="0azhxz2vq77fnw9678s2i04rws6cdw1prkqp9ng3fz8qphrz5q5y"; depends=[crochet]; }; BENMMI = derive2 { name="BENMMI"; version="4.3-6"; sha256="07jmf4icij8yb83bf7x0vsaf60gcvdzaijjckv5400xjykpm7scm"; depends=[benthos dplyr ggplot2 jsonlite knitr markdown purrr readr tidyr xtable]; }; - BEQI2 = derive2 { name="BEQI2"; version="2.0-0"; sha256="19q29kkwww5hziffkm2yx7n4cpfcsyh0z4mljdcnjkwfp732sjig"; depends=[jsonlite knitr markdown plyr reshape2 xtable]; }; BEST = derive2 { name="BEST"; version="0.5.1"; sha256="0yx3bkaaly0lriyd5xr7aay4c381a5iwanfixz9v37cmvs64rs4s"; depends=[coda HDInterval rjags]; }; BESTree = derive2 { name="BESTree"; version="0.5.2"; sha256="0yij6xdlvhbqifckaylgbhszwwp38d9x6vbpr1nl40mwwnv4bswz"; depends=[plyr]; }; BETS = derive2 { name="BETS"; version="0.4.9"; sha256="0daixk7mqmk2jq35i7mjaslz11gxbnnjgwxfvj8x1s88vz9l74sm"; depends=[DBI digest dplyr DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny sqldf stringr urca webshot xml2 zoo]; }; - BFS = derive2 { name="BFS"; version="0.2.2"; sha256="0if4p0y1yv95c8i0w4gvanzclq0j4pwzscyiq29bfkhcn4izqrmg"; depends=[janitor magrittr progress purrr pxR rvest tibble xml2]; }; - BFpack = derive2 { name="BFpack"; version="0.1.0"; sha256="1sqgn24k5sp928hpqyv0k5bjaz3yc5d7wsl3bkkxixm73w5p7g4j"; depends=[bain lme4 MASS Matrix MCMCpack mvtnorm pracma]; }; + BFS = derive2 { name="BFS"; version="0.2.4"; sha256="05s9w239p0i6rgh658jqbx4w29g7kc3wm0ky7q8zsw9cfwnn92f5"; depends=[janitor magrittr pins progress purrr pxR rvest tibble xml2]; }; + BFpack = derive2 { name="BFpack"; version="0.1.1"; sha256="0as8mr0g1arqds23k3gx7jcbg7g62yc6fpg45m7f7him4mxxi6k5"; depends=[bain lme4 MASS Matrix mvtnorm pracma]; }; BGData = derive2 { name="BGData"; version="2.1.0"; sha256="168lvmcfj9ch2dfp8haykgz8cwmrp1yqn01hbyssqfgpc42lrgf3"; depends=[BEDMatrix bigmemory bit crochet ff LinkedMatrix symDMatrix synchronicity]; }; BGGE = derive2 { name="BGGE"; version="0.6.5"; sha256="1h76c40y45xhf2vp9g0q5j9lfwh16q9axbk5c9aqn4md008xr1j2"; depends=[]; }; + BGGM = derive2 { name="BGGM"; version="1.0.0"; sha256="14skhkkf7jzc8b3gx8xjrf4xy42y2hrbcmm24gscz4pkfifyhvc0"; depends=[bayesplot cowplot doParallel foreach GGally ggplot2 ggridges MASS Matrix mvnfast mvtnorm network pracma reshape reshape2 shiny sna stringr]; }; BGLR = derive2 { name="BGLR"; version="1.0.8"; sha256="15cv5k44yj5cws9jjd70hvrkm8gzn5x4hfx408n2fbqbv289b5jy"; depends=[truncnorm]; }; BGPhazard = derive2 { name="BGPhazard"; version="2.0.0"; sha256="1qh3jylzdf66kx48gq83gc11d2qd27h4l88s965p25lw99lz528b"; depends=[dplyr ggplot2 ggthemes gridExtra magrittr purrr readr rlang survival tibble]; }; BGSIMD = derive2 { name="BGSIMD"; version="1.0"; sha256="0xkr56z8l72wps7faqi5pna1nzalc3qj09jvd3v9zy8s7zf5r7w4"; depends=[]; }; @@ -286,17 +284,17 @@ in with self; { BHSBVAR = derive2 { name="BHSBVAR"; version="2.0.2"; sha256="1y0fjdrg0wg66r3blb8app0h52f24v8vl04n0mgk9ypm45hm64my"; depends=[Rcpp RcppArmadillo]; }; BHTSpack = derive2 { name="BHTSpack"; version="0.5"; sha256="1sz99sgxhiajxca5bx2ns9g9qs9ymsvh8i5882nlp7c78qxmqc4g"; depends=[R2HTML xtable]; }; BICORN = derive2 { name="BICORN"; version="0.1.0"; sha256="0mqk8vgp6jdk7f0paa06yqlibkd1y3vs69pg7i9mkvxmda7p4nkq"; depends=[]; }; - BIEN = derive2 { name="BIEN"; version="1.2.3"; sha256="0p23kahba55gkk6wx10ii6vrni3b7ia2a4jb64ww4kwp86bknx3d"; depends=[ape DBI rgdal rgeos RPostgreSQL sp]; }; + BIEN = derive2 { name="BIEN"; version="1.2.4"; sha256="1dagrs54ciagm2mgqrvxl6k2akahr0qk63ifxqnks7iljm0x1gw6"; depends=[ape DBI doParallel fasterize foreach raster rgdal rgeos RPostgreSQL sf sp]; }; BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="3.3-12"; sha256="1kphczvj3rxyjvi93cx2j714scvmmpqv5wrg5pdyy8l891jxsr89"; depends=[miceadds Rcpp RcppArmadillo]; }; BIGDAWG = derive2 { name="BIGDAWG"; version="2.3"; sha256="1lnw31dl161siml6vcp74c30g0rld962ry3am9ljxmd9mw83shnz"; depends=[haplo_stats httr knitr XML]; }; - BIGL = derive2 { name="BIGL"; version="1.4.2"; sha256="0lrc7d6g7kr28sjib21x6p7nivyy2s057l0zm4ml1f0h1dppkxdl"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; }; + BIGL = derive2 { name="BIGL"; version="1.4.3"; sha256="1x00n0z9y5qn9nflbrp086a0nzrak8582vhpvbqhj945q7ayvxvy"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; }; BINCOR = derive2 { name="BINCOR"; version="0.2.0"; sha256="0x2s82jql429shk70bhjdy9kamz8dz5ymsxj6kp8ga1711bpwyq6"; depends=[pracma]; }; BIOM_utils = derive2 { name="BIOM.utils"; version="0.9"; sha256="0xckhdvf15a62awfk9rjyqbi6rm7p4awxz7vg2m7bqiqzdll80p7"; depends=[]; }; BIOMASS = derive2 { name="BIOMASS"; version="2.1.1"; sha256="0i7z0pxxp2b11gnsb51q89zk8wnxz1d86yv08xqf7zivgdf0sgpc"; depends=[data_table jsonlite minpack_lm rappdirs raster sp]; }; - BIOdry = derive2 { name="BIOdry"; version="0.7"; sha256="1psy1ckla8pdl3nshgzh7w6074fqfylkb3nn74hn0q02lgsz1vd6"; depends=[ecodist nlme]; }; + BIOdry = derive2 { name="BIOdry"; version="0.8"; sha256="1zga8g50wjnnz2h9b3ak9q67qnl1f14cq6hvdzf9f84pphsnpasa"; depends=[ecodist nlme]; }; BIS = derive2 { name="BIS"; version="0.2.1"; sha256="0mngmchgc46wc9a7ksyqrvj6k46nm4ih7x69k3xijfia9bgkym0v"; depends=[dplyr readr rvest tidyr xml2]; }; BKPC = derive2 { name="BKPC"; version="1.0.1"; sha256="17gmhf6qq8jn2xzkqvjq60xzy0slz6kgfpd0d6hlpnf30ww7q923"; depends=[kernlab]; }; - BLCOP = derive2 { name="BLCOP"; version="0.3.1"; sha256="1qfkljw5b1k4b5jd08hw6dsmvgr7vg3kjyib5s13q0mkxvclasym"; depends=[fBasics fMultivar fPortfolio MASS quadprog RUnit timeSeries]; }; + BLCOP = derive2 { name="BLCOP"; version="0.3.2"; sha256="00x8xk7c8pdwpbmzshjg2ph1yz55vxmliblj1xr7y0gqhcmgyr27"; depends=[fBasics fMultivar fPortfolio MASS quadprog RUnit timeSeries]; }; BLModel = derive2 { name="BLModel"; version="1.0.2"; sha256="0l5f2v5ggadmrci3qhhmxm3j9i6jii0anq5rv5vk50y2qzii2q15"; depends=[]; }; BLOQ = derive2 { name="BLOQ"; version="0.1-0"; sha256="1ag0dy3cjdxhlspmzfdnpli030g6gwac50n5s30igcyrmw6kl4hf"; depends=[maxLik mvnmle mvtnorm]; }; BLPestimatoR = derive2 { name="BLPestimatoR"; version="0.3.2"; sha256="0prc2m3hixv8hmnyhr5549406ln509llkhpqra2ifpzif0waw704"; depends=[Formula Matrix mvQuad numDeriv randtoolbox Rcpp RcppArmadillo]; }; @@ -304,7 +302,7 @@ in with self; { BLRPM = derive2 { name="BLRPM"; version="1.0"; sha256="15q0jkw4swz35c58nv23k8g1dy1kkbqh5aydjck7pd0fmppqrhpx"; depends=[R6]; }; BLRShiny = derive2 { name="BLRShiny"; version="0.1.0"; sha256="0z3gr0bvjs7y0jkygh7h9habnk2807cwziajpgfmb7dxdrhccj68"; depends=[caret dplyr e1071 ggplot2 rhandsontable rmarkdown shiny]; }; BLSM = derive2 { name="BLSM"; version="0.1.0"; sha256="02xidwp91rh34rcqd0q552wzm2j80axs1nnwwv2aj04g96lf7myj"; depends=[Rcpp RcppEigen]; }; - BMA = derive2 { name="BMA"; version="3.18.11"; sha256="13b9agsra9lv00dkmx57zbf6n7xixxlihk7svxaafk8snbyyhk5z"; depends=[inline leaps robustbase rrcov survival]; }; + BMA = derive2 { name="BMA"; version="3.18.12"; sha256="0yfx6m0y8chxlpyngzw27xsgz3g7481ra0xdhsli36mhj9yvgayb"; depends=[inline leaps robustbase rrcov survival]; }; BMAmevt = derive2 { name="BMAmevt"; version="1.0.4"; sha256="10241cibzmgrmxzjw7fpw64qkayc1wig5xilahyc182841k4if6w"; depends=[coda]; }; BMRBr = derive2 { name="BMRBr"; version="0.2.0"; sha256="0v2ysap5jfkq9fc5blqlfhsv2bs8rqybmp5z4q3g6y3y7qzhypjw"; depends=[rvest xml2]; }; BMRSr = derive2 { name="BMRSr"; version="1.0.0"; sha256="0xdzzwmn2ibzgy68djsf7jxayfwd2yr1qsa0dcg9zl4rhl6b8nrl"; depends=[httr readr stringr tibble xml2]; }; @@ -317,13 +315,14 @@ in with self; { BNN = derive2 { name="BNN"; version="1.0.2"; sha256="13h9xqfdqnc9d8brx1xlmvb4nrkpwncwjz98y7i3wijih85wkikd"; depends=[mvtnorm]; }; BNPMIXcluster = derive2 { name="BNPMIXcluster"; version="1.2.4"; sha256="06s0cs3anbby93n7pjcin9195agfzfq9im6f9k7ih3cbg8mzfaqy"; depends=[gplots MASS matrixcalc mvtnorm plyr Rcpp RcppArmadillo truncnorm]; }; BNPTSclust = derive2 { name="BNPTSclust"; version="2.0"; sha256="1ymvklv6d9684xzwdkvaxdjd1q20xmsf6kkfibn2wphlaqs2rh2n"; depends=[MASS mvtnorm]; }; - BNPdensity = derive2 { name="BNPdensity"; version="2019.9.18"; sha256="1s4mifmlvh0b0w4ckllg49z2jwfzy5d2x7lak38r92yg75nabng6"; depends=[coda dplyr ggplot2 gridExtra survival tidyr viridis]; }; + BNPdensity = derive2 { name="BNPdensity"; version="2020.3.4"; sha256="0775fcf5y78ibmhl5fljrlvznn1a74s5ihldb6wgixmm4c0xmz3x"; depends=[coda dplyr ggplot2 gridExtra survival tidyr viridis]; }; BNPmix = derive2 { name="BNPmix"; version="0.2.5"; sha256="16k7161yk1blpqwy9kj8lw565v9zl1298kqmf0agx8wjjjll4jyh"; depends=[coda ggplot2 Rcpp RcppArmadillo]; }; BNSL = derive2 { name="BNSL"; version="0.1.4"; sha256="0nrlx55364kgvkdpyaimgjxwnzmmdl1gmvyv3wkm8n2jyki92xxp"; depends=[bnlearn igraph Rcpp]; }; - BNSP = derive2 { name="BNSP"; version="2.1.2"; sha256="0ww09khxfi51spdh8b1qqi7hfms1djfs8pv2g3w5767aggr0b017"; depends=[coda corrplot cubature Formula ggplot2 gridExtra mgcv plot3D plyr threejs]; }; + BNSP = derive2 { name="BNSP"; version="2.1.3"; sha256="1dsic7vmmgklbd7ykkj1484j8gxkra1xjf0bpqc41wwjdc30gfj9"; depends=[coda corrplot cubature Formula ggplot2 gridExtra label_switching mgcv plot3D plyr threejs]; }; BOG = derive2 { name="BOG"; version="2.0"; sha256="0lz5af813b67hfl4hzcydn58sjhgn5706n2h44g488bks928k940"; depends=[DIME hash]; }; BOIN = derive2 { name="BOIN"; version="2.6.4"; sha256="0p1205pxa5a9sbw88fm8lbvzgzyq3mf62lsp0l2c0sfsvcfpydkg"; depends=[Iso]; }; BOSSreg = derive2 { name="BOSSreg"; version="0.1.0"; sha256="1nngs9j1hbb9ws423dxccjxwpkc5zl6l0zv46gb0v6m8y11d077b"; depends=[Matrix Rcpp RcppArmadillo]; }; + BPEC = derive2 { name="BPEC"; version="1.3.1"; sha256="0jvq56cq1wnhwd6wvg02hbx4b5vc2hz1lyxi63pl41rk0xva615a"; depends=[ape coda fields ggmap ggplot2 igraph maptools mvtnorm OpenStreetMap phytools sp]; }; BPM = derive2 { name="BPM"; version="1.0.0"; sha256="17k2d1xjfz85ygx0xnh6yqca9nyypd32d7sbna3k33ynsjqay3x8"; depends=[limma]; }; BRETIGEA = derive2 { name="BRETIGEA"; version="1.0.0"; sha256="176z7ajyfcfljv36d2sa15cvw047rsir3gn0l4lxmcyliw93r4lv"; depends=[]; }; BRISC = derive2 { name="BRISC"; version="0.2.0"; sha256="0dnkf4ld1blbadmxvgd0k021ihszrf2x19qypvv8jvgfrgcr8ax7"; depends=[matrixStats pbapply RANN rdist]; }; @@ -337,13 +336,13 @@ in with self; { BSSasymp = derive2 { name="BSSasymp"; version="1.2-1"; sha256="0w141yxqpck59n85rjc6d3qy6bwhk1z80zsm21hda0bgfwy9v6wy"; depends=[fICA JADE]; }; BSagri = derive2 { name="BSagri"; version="0.1-10"; sha256="096l2ilr4x2fbjxchkksxkbiyaf7wwdmzn4xyjx001w873x9dgf6"; depends=[boot gamlss MCPAN mratios multcomp mvtnorm]; }; BTLLasso = derive2 { name="BTLLasso"; version="0.1-10"; sha256="0ab19dcn55nzkl3q865affiqjkd4j9yiil0a7kxcpbm0rva9x6zj"; depends=[Matrix psychotools Rcpp RcppArmadillo stringr TeachingDemos]; }; - BTM = derive2 { name="BTM"; version="0.2.1"; sha256="17h032dbg8n48dc74khab8vpprk76hlyngsgb52wlhczapkckf94"; depends=[Rcpp]; }; + BTM = derive2 { name="BTM"; version="0.3"; sha256="1vb3happ2fw3h7yilm87qxsrmncjnpaapiwqr7ai2p54vk7pax9m"; depends=[Rcpp]; }; BTSPAS = derive2 { name="BTSPAS"; version="2020.1.1"; sha256="004klyyg9gqalwx2i5lx57p1qxrm50nszzg839kv3v421b14qg80"; depends=[actuar coda data_table ggforce ggplot2 gridExtra plyr R2jags reshape2]; }; BTYD = derive2 { name="BTYD"; version="2.4"; sha256="13szcsgsrd7mwc4f47xrfrmsm2sg5sf7pfm21ly4cbvqcz8m0147"; depends=[hypergeo Matrix]; }; BTYDplus = derive2 { name="BTYDplus"; version="1.0.1"; sha256="0x8as4zskpbsvhh8gnvzgp833dkv01cs5fqfva9qri296343kppv"; depends=[bayesm BTYD coda data_table mvtnorm Rcpp]; }; BTdecayLasso = derive2 { name="BTdecayLasso"; version="0.1.0"; sha256="0x1s2zvv3vnapk5wp8582zwflsqvgc8khkvl5ch9i70v739jxp15"; depends=[ggplot2 optimr]; }; BUCSS = derive2 { name="BUCSS"; version="1.1.0"; sha256="1agx6yd29zq6gvwgnd0qahjnk5z7gdbijbg7rk85d5x6pihwmh9q"; depends=[]; }; - BVAR = derive2 { name="BVAR"; version="0.2.1"; sha256="0ql8ivnfkjy4sh376lxpm5bvy54h20zhhgwz8qrkl2x24lxsmwm0"; depends=[mvtnorm]; }; + BVAR = derive2 { name="BVAR"; version="0.2.2"; sha256="0gvzwxnscfny0xfr093bmbhyw82g93zabfd2y20b74l53f0asz9l"; depends=[mvtnorm]; }; BVS = derive2 { name="BVS"; version="4.12.1"; sha256="111g61bpwh80v6gy44q087swcrnnnzdcibm22pzzi9jsfphy6l0c"; depends=[haplo_stats MASS msm]; }; BVSNLP = derive2 { name="BVSNLP"; version="1.1.8"; sha256="0qlmvi189ky6h0a3jyvyil488asx3v6x52mvca7s93dvarxr6rw1"; depends=[doParallel foreach Rcpp RcppArmadillo RcppEigen RcppNumerical]; }; BWStest = derive2 { name="BWStest"; version="0.2.2"; sha256="02amzlfprmw5pyis0dg0kg0x8xqh50a4vfdcxxmklrzik3b1vzzs"; depends=[memoise Rcpp]; }; @@ -363,11 +362,12 @@ in with self; { Barnard = derive2 { name="Barnard"; version="1.8"; sha256="1ki58hjs5kpmp76kwj1qi6hwmdvjphqb1lvrlhnmkgqxg4hw4vqg"; depends=[]; }; Barycenter = derive2 { name="Barycenter"; version="1.3.1"; sha256="0yhc0wwjqms569gnm8z2l9hgcbw8lyy437ynkij47pa4c1a1qvjy"; depends=[Rcpp RcppArmadillo]; }; BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.2"; sha256="0zvcpgzhbna6p37jlf57j7mzrvh5xs5w17janmv9v4210cpbzi1q"; depends=[backports BatchJobs BBmisc checkmate data_table DBI RSQLite]; }; - BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.5.4"; sha256="0a8p9k232ab36xjr5a8rkk19zf8cx8q1pvx54z0xg1dncn28lxwa"; depends=[curl dplyr furrr future lubridate purrr quantmod rvest scales stringr tibble tidyr XML zoo]; }; + BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.5.6"; sha256="0cwnr4fxpjfm7l4jf3mmf14fdqnvavj5if0xf6fdx1spn59w8s97"; depends=[crayon curl dplyr furrr future lubridate purrr quantmod rvest scales stringr tibble tidyr XML zoo]; }; BatchJobs = derive2 { name="BatchJobs"; version="1.8"; sha256="1zz4sspj596pijxlz321g0jy2rg9ki83j6fihbwisjwr66p2vk1m"; depends=[backports BBmisc brew checkmate data_table DBI digest RSQLite sendmailR stringi]; }; BayHaz = derive2 { name="BayHaz"; version="0.1-3"; sha256="08ilghlkgyma5758yw7mdgqycqcillqmx73knzzdlg2kzc77dvg6"; depends=[]; }; BayLum = derive2 { name="BayLum"; version="0.1.3"; sha256="0hina84s8ax01zpnji4jqqkdap0phvxr78s4rnab0407xrydbf0w"; depends=[ArchaeoPhases coda hexbin KernSmooth Luminescence rjags]; }; BaySIC = derive2 { name="BaySIC"; version="1.0"; sha256="023ji6q1nvksmhp3ny8ad39xxccc0a1rv9iaiaagwavgzzc0pjd9"; depends=[fields poibin rjags]; }; + BayesARIMAX = derive2 { name="BayesARIMAX"; version="0.1.0"; sha256="1kz0x5l97l7zqpi3813ibqk6gsv3wsxnvgcw6lplg7gfxjavcz7w"; depends=[coda forecast TSA]; }; BayesBD = derive2 { name="BayesBD"; version="1.2"; sha256="10ik2lndqgmy6pvdm6cx4fsxgjb2fgi6hlz5ic35ab7fkpi90ka5"; depends=[jpeg mritc png Rcpp RcppArmadillo shiny]; }; BayesBEKK = derive2 { name="BayesBEKK"; version="0.1.0"; sha256="0fykcmf54820krwy7q573gmlcrx96i94knx7rgzc83i287lnpnfg"; depends=[coda MTS mvtnorm]; }; BayesBP = derive2 { name="BayesBP"; version="1.0"; sha256="1gmjljkp4pvm87qf6rq2kixqdx64sfg34b1xxdl242a3cckmjc5y"; depends=[iterators openxlsx]; }; @@ -382,12 +382,13 @@ in with self; { BayesFactor = derive2 { name="BayesFactor"; version="0.9.12-4.2"; sha256="1z083v7is21gm0a458jm5ph3xfdm7mh29a6sg2r1njq82f8x3s3g"; depends=[coda gtools hypergeo Matrix MatrixModels mvtnorm pbapply Rcpp RcppEigen stringr]; }; BayesGESM = derive2 { name="BayesGESM"; version="1.4"; sha256="0qw2byb48f67461m1k8a1rqh6a0c3zq1rc4ni9xzxv8dih4wkq0f"; depends=[Formula GIGrvg normalp]; }; BayesGOF = derive2 { name="BayesGOF"; version="5.2"; sha256="17wm0228xq3db431abyi9jr0q1q86nnajsn7hmy4dwzgvrlz5s0i"; depends=[Bolstad2 nleqslv orthopolynom VGAM]; }; - BayesLCA = derive2 { name="BayesLCA"; version="1.7"; sha256="0lsqgjqal9092v1wr07p8g5cqm24k2d80sp7hlr7r1xknakmm1b6"; depends=[coda e1071 fields MCMCpack nlme]; }; + BayesGPfit = derive2 { name="BayesGPfit"; version="0.1.0"; sha256="1sz0bb102h5fj1yz0k89cvcy0pvsh6rfm06i6lfz3pdhdjszsx00"; depends=[lattice]; }; + BayesLCA = derive2 { name="BayesLCA"; version="1.8"; sha256="1r62h8g2bjr68682pffjclcrxvpbz24gm28s03dnzjh4aha7f9y7"; depends=[coda e1071 fields MCMCpack nlme]; }; + BayesLN = derive2 { name="BayesLN"; version="0.1.2"; sha256="16nw6nxqqcqlcqjbz1nyk2laz5naqfj9hg1a616x1ms88bhxmcsx"; depends=[coda data_table fAsianOptions ghyp lme4 MASS optimx Rcpp RcppArmadillo]; }; BayesLogit = derive2 { name="BayesLogit"; version="2.1"; sha256="0w3bzk39sxdskwikcz5i0xwfsll4sqgkpr8vw8jvzlcy6dl3yhis"; depends=[]; }; BayesMAMS = derive2 { name="BayesMAMS"; version="0.1"; sha256="1qq3j9nm0k58gpyfavz77v1dwghy8pmpk0v52cj7l8sb3a3aiinm"; depends=[mvtnorm]; }; BayesMFSurv = derive2 { name="BayesMFSurv"; version="0.1.0"; sha256="1yxxzwjh1fgfh7qkzf9dfm3x0vbgb0v4p6bf6b5w14kvm06rzhkg"; depends=[coda FastGP MCMCpack mvtnorm Rcpp RcppArmadillo]; }; BayesMallows = derive2 { name="BayesMallows"; version="0.4.1"; sha256="0q89al122393nym9i71gz5mh10d304fcnbw2naxwzmj744g3lpm2"; depends=[cowplot dplyr ggplot2 HDInterval igraph PerMallows purrr Rcpp RcppArmadillo Rdpack relations rlang sets tidyr]; }; - BayesMed = derive2 { name="BayesMed"; version="1.0.1"; sha256="1ysc7sh0drqxbisi2dz6gj4jlw6qsd879bbhr5pra7nxgmk4h650"; depends=[MCMCpack polspline R2jags]; }; BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; }; BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; }; BayesNSGP = derive2 { name="BayesNSGP"; version="0.1.1"; sha256="11c83iafhl8yasyy8xwk9wladbj986xpmgc8d3yd9dxkic71flw8"; depends=[FNN Matrix nimble StatMatch]; }; @@ -396,6 +397,7 @@ in with self; { BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; }; BayesPostEst = derive2 { name="BayesPostEst"; version="0.2.0"; sha256="0yyf9mawpq8ynw5mx0684f8yw3ajf01wadfdvs2yanjlgqbmy1sj"; depends=[carData caTools coda dplyr ggmcmc ggplot2 ggridges HDInterval R2jags reshape2 rlang ROCR runjags texreg tidyr]; }; BayesRS = derive2 { name="BayesRS"; version="0.1.3"; sha256="0fhvnckabp0z1cdsbjgv3ijnzaxwhrk83fwcflgqbhvm3a9lzr77"; depends=[coda ggplot2 metRology reshape rjags]; }; + BayesReversePLLH = derive2 { name="BayesReversePLLH"; version="1.3"; sha256="07ijys5qd29qpa1hh6kbbp6fx97nmxydiijd0k0dh262vqfhh5ll"; depends=[Rcpp RcppArmadillo]; }; BayesS5 = derive2 { name="BayesS5"; version="1.31"; sha256="1azxn3r0s52zy6y5qsa6yx331795mkk7fb28fcinv2zx9iyvk33w"; depends=[abind Matrix snowfall]; }; BayesSAE = derive2 { name="BayesSAE"; version="1.0-2"; sha256="1xbx9hr254agpcqs1fl7qi7h19fd2bbmjszn44l566n2svgvxwf5"; depends=[coda Formula lattice]; }; BayesSUR = derive2 { name="BayesSUR"; version="1.0-4"; sha256="1n38k9y1hvymfq556d5v2q69wqycvzdkjjgwzx0sz236wdqi64wv"; depends=[igraph Matrix Rcpp RcppArmadillo tikzDevice xml2]; }; @@ -406,21 +408,22 @@ in with self; { BayesTreePrior = derive2 { name="BayesTreePrior"; version="1.0.1"; sha256="13igmvw1wj8kzfijzsrhdqr52kv4vqrm91i71ay6f7jnkry3spaw"; depends=[]; }; BayesTwin = derive2 { name="BayesTwin"; version="1.0"; sha256="026blnhihbx9bpd63mxhbp0kpvj0lwbj7mg72alyfr2jnrh1n3lp"; depends=[coda foreign matrixStats rjags]; }; BayesValidate = derive2 { name="BayesValidate"; version="0.0"; sha256="1gli65avpkb90asx92l1yjbwaxcsyb920idyjwgd2sl2b3l657ly"; depends=[]; }; - BayesVarSel = derive2 { name="BayesVarSel"; version="1.8.0"; sha256="1sf18m4p8zaw2s5fv4p9s99n1n0cgzscgfhm5ngkzif43kwz1l6n"; depends=[MASS mvtnorm]; }; + BayesVarSel = derive2 { name="BayesVarSel"; version="2.0.1"; sha256="1107amhj3bclc434qizffjfmsa2w36qkp6gq7vgl0hwv0ncc0vyn"; depends=[MASS mvtnorm]; }; BayesX = derive2 { name="BayesX"; version="0.3-1"; sha256="0g4cdkvicqzg75qgr62j89dc9mni38ai7705j6jbfx59vn6dbrr5"; depends=[coda colorspace maptools shapefiles sp]; }; BayesXsrc = derive2 { name="BayesXsrc"; version="3.0-1"; sha256="0l8c6xsyqj09m722hdanr1d9n6a1ps77ybm1jaqmp86bqmq1br03"; depends=[]; }; BayesianAnimalTracker = derive2 { name="BayesianAnimalTracker"; version="1.2"; sha256="1pgjijqznfdpvw296h5vksnxgspxs7qhy6s84ww7abnlhg59bz5s"; depends=[TrackReconstruction]; }; - BayesianFROC = derive2 { name="BayesianFROC"; version="0.2.1"; sha256="017vdlw07mn0g3h8illvs0n4xdq6j6qvx1251gmhwvlnyb9lc2vh"; depends=[bridgesampling car crayon DiagrammeR ggplot2 knitr pracma Rcpp readxl rhandsontable rstan shiny shinydashboard shinythemes xlsx]; }; + BayesianFROC = derive2 { name="BayesianFROC"; version="0.2.2"; sha256="0l3lal9wa5mhsirhqqg6fjzq6d9l805d1l9jxng22ykqhrmaff8p"; depends=[bridgesampling car crayon DiagrammeR ggplot2 knitr pracma Rcpp readxl rhandsontable rstan shiny shinydashboard shinythemes xlsx]; }; BayesianGLasso = derive2 { name="BayesianGLasso"; version="0.2.0"; sha256="09yb1qqx6qlsspk3ndrcqxy0956iqznw0rmyvqxgxxp3zd3y21xp"; depends=[MASS statmod]; }; BayesianNetwork = derive2 { name="BayesianNetwork"; version="0.1.5"; sha256="0vnnxzxz68dkfwr9wif8lam3a4khgbslbf49xkygqm8n1swysx2x"; depends=[bnlearn heatmaply lattice networkD3 plotly rintrojs shiny shinyAce shinydashboard shinytest shinyWidgets testthat]; }; BayesianPower = derive2 { name="BayesianPower"; version="0.1.6"; sha256="1n41blyqmjq2zdhbz8srsx32piyg26fwgzfphhka12ybk93b2d2h"; depends=[]; }; BayesianTools = derive2 { name="BayesianTools"; version="0.1.7"; sha256="0330bbnny35h4gsmwg31p3n3i511wrckzmp174ydm55pvsdkhjdg"; depends=[bridgesampling coda DHARMa ellipse emulator gap IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm]; }; - Bayesrel = derive2 { name="Bayesrel"; version="0.1.0"; sha256="0nv5rar9h0yf2f710yb7g61lp8gvrkprp4qqqpc6r6vc22g8d02p"; depends=[coda ggplot2 ggridges LaplacesDemon lavaan MASS plotrix Rcsdp Rdpack]; }; + Bayesiangammareg = derive2 { name="Bayesiangammareg"; version="0.1.0"; sha256="0b0fqmig7vgmlrq2884q0apfd89nn5k4dj8rqjizkkbw4qpzmylb"; depends=[mvtnorm]; }; + Bayesrel = derive2 { name="Bayesrel"; version="0.6.1"; sha256="1mdc53g17c4r078mw74iiir03ks8kv60qh16l8fqy00vzwvbgpi9"; depends=[coda ggplot2 ggridges LaplacesDemon lavaan MASS plotrix Rcsdp Rdpack]; }; BaylorEdPsych = derive2 { name="BaylorEdPsych"; version="0.5"; sha256="1kq6nvzdqwawygp7k62lw5hyccsj81jg82hq60yidgxnmmnnf7y2"; depends=[]; }; BcDiag = derive2 { name="BcDiag"; version="1.0.10"; sha256="1gyinmx5wn2kk70hiy28ghilkhfirfjbfqdrqq5h3wfb4khnq6pz"; depends=[fabia]; }; - Bchron = derive2 { name="Bchron"; version="4.5.0"; sha256="0nxf0wzx2y3h7q0c23avn5hs7cqh9347xlk8l8fn65yd0d9xqrch"; depends=[coda dplyr ellipse ggforce ggplot2 ggridges magrittr MASS mclust purrr scales stringr viridis]; }; + Bchron = derive2 { name="Bchron"; version="4.7.0"; sha256="1wzi63szg6x6h8x5ngm8x3scp0qlgld5dyidqic5ibhvxd36rqhy"; depends=[coda dplyr ggforce ggplot2 ggridges magrittr MASS mclust purrr scales stringr]; }; Bclim = derive2 { name="Bclim"; version="3.1.2"; sha256="0dd4fx3rlljj3zb1m8q1bam1bswg497l3y8k0h0mkvjn94b4jbag"; depends=[ggplot2 MASS mclust statmod]; }; - BeSS = derive2 { name="BeSS"; version="1.0.6"; sha256="018gwcxhpmrblqh389krcpvxwrzl6fg25fg3mqrdvkalyx9xja5w"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; + BeSS = derive2 { name="BeSS"; version="1.0.7"; sha256="1s43v61xx1c7b6b4zvpcdry8l2c6klllsc0cpcxp5y2bjmg5zj5v"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; Benchmarking = derive2 { name="Benchmarking"; version="0.28"; sha256="1f13m6fz9wd6zzknglcl0za16dbjsxn9f2714rpg8hcsr3hrlhdl"; depends=[lpSolveAPI ucminf]; }; BenfordTests = derive2 { name="BenfordTests"; version="1.2.0"; sha256="1nnj0w0zwcmg7maqmmpixx7alvsyxva370ssc26ahg6kxy5a621w"; depends=[]; }; Bergm = derive2 { name="Bergm"; version="5.0.1"; sha256="1zy2ar43v7pf1ibbhf7visy1ia24lfpa2kb921vxd7hiilky1h8v"; depends=[coda ergm Matrix matrixcalc MCMCpack mvtnorm network]; }; @@ -431,7 +434,7 @@ in with self; { BeyondBenford = derive2 { name="BeyondBenford"; version="1.2"; sha256="0319jva0b43xcx7l0jyn0cxkazv7qi05bzmpas8wphk9f8r9jlim"; depends=[ggplot2]; }; Bhat = derive2 { name="Bhat"; version="0.9-10"; sha256="1vg4pzrk3y0dk1kbf80mxsbz9ammkysh6bn26maiplmjagbj954v"; depends=[]; }; BiBitR = derive2 { name="BiBitR"; version="0.3.1"; sha256="0wfwph6nw12hb43j14i9ycj8m2zn0m5ynp7afq9cray8rbgvxfv6"; depends=[biclust cluster dendextend foreign lattice randomcoloR viridis]; }; - BiDAG = derive2 { name="BiDAG"; version="1.2.0"; sha256="0cn6aasrhqv5vkdb45a1mjzkgcppv1m57cx2bi97riy3siy5h0dy"; depends=[pcalg Rcpp]; }; + BiDAG = derive2 { name="BiDAG"; version="1.3.0"; sha256="0pbb77k0fipbd0bx9dxwlcqkgwyvx34865wc9b98g40zvzqn903f"; depends=[graph pcalg Rcpp Rgraphviz]; }; BiDimRegression = derive2 { name="BiDimRegression"; version="2.0.0"; sha256="0k0708z6xn04zjkc4sk15649wji6hl5q4rvd28sz5kbq7z54j1j5"; depends=[Formula]; }; BiProbitPartial = derive2 { name="BiProbitPartial"; version="1.0.3"; sha256="0y19b8bkwr7rpygmj03013slmfbyd7aj6714hm14w5rdbnckymw3"; depends=[coda Formula mvtnorm numDeriv optimr pbivnorm Rcpp RcppArmadillo RcppTN]; }; BiSEp = derive2 { name="BiSEp"; version="2.2"; sha256="1ha7rc1q54dr2xl4bpkiwl703igmmi9qphsgv2h0flq7iz0gr351"; depends=[AnnotationDbi GOSemSim mclust]; }; @@ -445,6 +448,7 @@ in with self; { BigVAR = derive2 { name="BigVAR"; version="1.0.6"; sha256="03d5a61clkngq67mkf2pyjj3k633kxp7g37myfplbxi55bdfmdlz"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; BimodalIndex = derive2 { name="BimodalIndex"; version="1.1.9"; sha256="1m1dcj0ryjicaqjlkch7aymsklmvjvn2dvnbssi1cpi54bzn8l7g"; depends=[mclust oompaBase]; }; BinGSD = derive2 { name="BinGSD"; version="0.0.1"; sha256="0ygr5na7s82xa6vv9f3j6ns5sfhdacyykl1fg422lpkwbss39dnn"; depends=[mvtnorm]; }; + BinMat = derive2 { name="BinMat"; version="0.1.2"; sha256="17f5aaz8csfs1x1x7dxvbi4g97cp75kz7ikijsyk4pgpalld58a4"; depends=[magrittr MASS pvclust]; }; BinNonNor = derive2 { name="BinNonNor"; version="1.5.1"; sha256="1afxf0lcdsvw7ky3v25jyl9z9krknvw10ryi2fhgjbydq1nyijl6"; depends=[BB corpcor Matrix mvtnorm]; }; BinNor = derive2 { name="BinNor"; version="2.3.1"; sha256="07f08nn9sbpgddm849rgabka1cb19j3s1yg1c1wydbgfkjakv95x"; depends=[corpcor Matrix mvtnorm psych]; }; BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.5"; sha256="0pw0a4g0v9g5k89hy5jz7hy4f3qg8fwyij6b1lj0b7bpy4mg0kv5"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; @@ -472,7 +476,7 @@ in with self; { Bioi = derive2 { name="Bioi"; version="0.2.10"; sha256="1ay8889490nfhxhh72fvk9z4h58xknm2b145xhbx2wbzj65zf9ib"; depends=[assertthat dplyr igraph Rcpp]; }; Biolinv = derive2 { name="Biolinv"; version="0.1-2"; sha256="0g9vw1jcsjawmddkixssm5gbncy17fdd6a3c5b2qd4hx81kxz8q9"; depends=[classInt fields raster sp spatstat]; }; Biopeak = derive2 { name="Biopeak"; version="1.0"; sha256="1l08m1jl8yygbdfzk8klpj1q2m7icvxi98vmk7akxs0sswjc6wd2"; depends=[cluster dbscan factoextra gplots RColorBrewer]; }; - Bios2cor = derive2 { name="Bios2cor"; version="2.0"; sha256="1rrz0vs6wbkwys3l5jv1rdnlhyb4r1q9pv7jlnmsx6c1b4f4vz5n"; depends=[bigmemory bio3d circular igraph]; }; + Bios2cor = derive2 { name="Bios2cor"; version="2.1"; sha256="04wk1cjrrxhpv1kdhd67r1qvjv268xxi0z0r105wy912110z9m6x"; depends=[bigmemory bio3d circular igraph]; }; BisRNA = derive2 { name="BisRNA"; version="0.2.2"; sha256="11jl5109nlm272vncprwplkz4kpvg7yx6yfnbjg47lfrsxcj8n0g"; depends=[MASS]; }; BisqueRNA = derive2 { name="BisqueRNA"; version="1.0.1"; sha256="0jbplh1vfcr5rwqbli2h5bg7b3rdkc9vbsyj7fzlz474blzfg6mr"; depends=[Biobase lsei]; }; BivGeo = derive2 { name="BivGeo"; version="2.0.1"; sha256="1sj52v1zmk425jw9acq9y0jdp3agx103yzf1bjbc5vrmk1x0i0qr"; depends=[]; }; @@ -501,6 +505,7 @@ in with self; { BoolNet = derive2 { name="BoolNet"; version="2.1.5"; sha256="11fysc39vfk3zb9qklryi8gl42c3hqgzlvci4jj0zkqnm0v9amqk"; depends=[igraph XML]; }; Boom = derive2 { name="Boom"; version="0.9.3"; sha256="1mp8vp5fgfirlbgix5vncf05n6b7xyk5giqzxgxnd8g9l4j8r7rd"; depends=[MASS]; }; BoomSpikeSlab = derive2 { name="BoomSpikeSlab"; version="1.2.1"; sha256="1fxh39rplcnpfyffvzl7kns04lvfc1jx70nsq1380471z1n144lj"; depends=[Boom igraph]; }; + BoostMLR = derive2 { name="BoostMLR"; version="1.0.2"; sha256="1iy8v9jc13wncz6z3rqlbxkf9lclq0qynp4m54b5xl35qz9xq676"; depends=[nlme Rcpp RcppArmadillo]; }; BootMRMR = derive2 { name="BootMRMR"; version="0.1"; sha256="07am80603pv1dh5ma3zb0idnslkzm5m3ym8sd1nhkh8zbc6qqmzs"; depends=[]; }; BootPR = derive2 { name="BootPR"; version="0.60"; sha256="03zw7hz4gyhp6iq3sb03pc5k2fhvrpkspzi22zks25s1l7mq51bi"; depends=[]; }; BootWPTOS = derive2 { name="BootWPTOS"; version="1.2"; sha256="1860l11xg7444l3x42rq3636csla23gg0mi5in1zibjwn1ddc202"; depends=[fractal wavethresh]; }; @@ -508,34 +513,32 @@ in with self; { Boptbd = derive2 { name="Boptbd"; version="1.0.5"; sha256="1p786avc37yq5g01zh6sqx7b1rvbxrh6gbxsad4bdvr12cjdsss6"; depends=[igraph MASS Matrix]; }; Boruta = derive2 { name="Boruta"; version="6.0.0"; sha256="1pp8zal1vhxlzdhl20phn39m3ffhw5glyqbcgwa0w14zw2mpm6hw"; depends=[ranger]; }; BosonSampling = derive2 { name="BosonSampling"; version="0.1.1"; sha256="0wxn12h903a0mlrkrr3w4qd9ld2a4bifs95i98cnl2dsb76rwf12"; depends=[Rcpp RcppArmadillo]; }; - BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.1-0"; sha256="13lhs6rynyj9cw13panqbn2jzkhq5fixhfd0ldr128gvw5d43hxg"; depends=[brglm gtools lme4 qvcalc]; }; - BradleyTerryScalable = derive2 { name="BradleyTerryScalable"; version="0.1.0"; sha256="0g12fkfs2sykyd6fzf924zv8gj2js452c4pf0pz2p6156chwrk8c"; depends=[dplyr igraph Matrix purrr Rcpp RcppArmadillo]; }; + BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.1-2"; sha256="0vss3ib74cz2zn1afmrvllawghj9z2ay4x1ysvk4rqvjmiia4a2i"; depends=[brglm gtools lme4 qvcalc]; }; BrailleR = derive2 { name="BrailleR"; version="0.30.2"; sha256="0n44qmy7hcxa09zh4wr22mrv61zgpl4w67l0iivm0wibnkgz6vx7"; depends=[devtools dplyr extrafont ggplot2 gridGraphics gridSVG hunspell knitr magrittr moments nortest reticulate rmarkdown roloc rolocISCCNBS whisker XML xtable]; }; Branching = derive2 { name="Branching"; version="0.9.4"; sha256="1c209gdasm7qipv2gg4d1hr0jmhnzz5rddgjxb7xacazc0c2mhff"; depends=[]; }; - BreedingSchemeLanguage = derive2 { name="BreedingSchemeLanguage"; version="0.9.6"; sha256="0lj8s42ndqqllnm8v978481zqmc751v31909rir1pkwcsm3irisx"; depends=[ggplot2 lme4 Matrix Rcpp rrBLUP snowfall]; }; Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-6"; sha256="1m3ajvcksqfck5l5hj5xiflj4ry6d896ybv4f0xxks8chgnwmv0r"; depends=[]; }; BrownDog = derive2 { name="BrownDog"; version="0.2.1"; sha256="0wnf1jcf4cakbvj9j1l7jk9mq7gd4j1il1ha2vglghqn04f27938"; depends=[httpuv jsonlite RCurl]; }; Brq = derive2 { name="Brq"; version="2.5"; sha256="0b7xsamzvg2z746qrpq1nc9181awr7darnk06xi4wzqygbxgnll2"; depends=[]; }; Brundle = derive2 { name="Brundle"; version="1.0.9"; sha256="0z17wgmi272738n8pn6r60v5gbg8cbmwhc94s8f3vipa44h690bc"; depends=[DESeq2 DiffBind lattice Rsamtools]; }; BsMD = derive2 { name="BsMD"; version="2013.0718-1"; sha256="06w1dl5zp1cgjhk3m2zz6xsmcfwdk6ar3gmxdn96v71mqnhv81v1"; depends=[]; }; - Buddle = derive2 { name="Buddle"; version="1.0"; sha256="1aw0xmdw4m778vk9wqxy90dv9rkkb17d51f0sdwypb3l7d4d897b"; depends=[Rcpp RcppArmadillo]; }; + Buddle = derive2 { name="Buddle"; version="2.0.1"; sha256="0hi516cbl93z00jpdgyp3j5hz0xf594vn65p6ahpffwzh1l8s1cf"; depends=[plyr Rcpp RcppArmadillo]; }; BullsEyeR = derive2 { name="BullsEyeR"; version="0.2.0"; sha256="1p8b5w818zi7zs0n13cc3sw8z0z9mfr5cn5y5icsx1jam5amppci"; depends=[Matrix NLP slam tm topicmodels]; }; BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; }; BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; BusinessDuration = derive2 { name="BusinessDuration"; version="0.2.0"; sha256="17923n1r3n8kp7qqzr2dv8ffax355yyc3b9f6mv2hxy6k31hrrb8"; depends=[chron]; }; - BuyseTest = derive2 { name="BuyseTest"; version="1.8.3"; sha256="0kwv4jcn4rqdcglj2y9xm3i1g47jz7xdkp7r9hnvxq4xh3sp4fqr"; depends=[data_table doParallel foreach lava prodlim Rcpp RcppArmadillo]; }; + BuyseTest = derive2 { name="BuyseTest"; version="1.8.5"; sha256="1czgkp1n9rvc9v8vzb991pn6hw1wx77gjrdz5bfgi2whzdj2dgn0"; depends=[data_table doParallel foreach lava prodlim Rcpp RcppArmadillo]; }; Bvalue = derive2 { name="Bvalue"; version="1.0"; sha256="17zlllzjrcq4grggal3hlg384990n62wnflr2g21fa6hcnglwy7d"; depends=[]; }; C443 = derive2 { name="C443"; version="1.0.0"; sha256="0d04769m9kkjqpj1cgfhqrri893nwi6qn7fz63z5pkym5cig5yyi"; depends=[cluster ggplot2 gridExtra igraph MASS partykit qgraph RColorBrewer reshape2 rpart]; }; C50 = derive2 { name="C50"; version="0.1.3"; sha256="01cbkilvp18r4f2khkj48w0znngvqckng91530kqqdqr2wc1ssac"; depends=[Cubist partykit]; }; CA3variants = derive2 { name="CA3variants"; version="2.0"; sha256="1wnc9qfcligpsi5ycmzw0igm14h6lvf4vd82aygnas6q41vnypwz"; depends=[ggplot2 ggrepel gridExtra multichull]; }; CADFtest = derive2 { name="CADFtest"; version="0.3-3"; sha256="06bwv728ckalzibxginzfica24w18m4g87i0i064m3q89ghmnlqm"; depends=[dynlm sandwich tseries urca]; }; CADStat = derive2 { name="CADStat"; version="3.0.8"; sha256="0wdglw1vyd5gz70r9ma0mwshvizv39nb4ahp8pvr70c4qqzsfhc0"; depends=[bio_infer car gdata gmodels JavaGD JGR lattice MASS quantreg rJava rpart XML]; }; - CAISEr = derive2 { name="CAISEr"; version="1.0.15"; sha256="0igm1yvhllnhqd0bc2z6bfjdmr3w2465xi7vyaa7a68dd5k81apj"; depends=[assertthat ggplot2 gridExtra pbmcapply]; }; + CAISEr = derive2 { name="CAISEr"; version="1.0.16"; sha256="08br6hdpgf9y2fix299diwd8r3q4gylpbzll4knpxq0vi18a3hz3"; depends=[assertthat ggplot2 gridExtra pbmcapply]; }; CALF = derive2 { name="CALF"; version="0.2.0"; sha256="12w1vr0rk6m4lv6zvqrf45k81d301ln1253wyy9xi6mv1hkabg0v"; depends=[ggplot2]; }; CAMAN = derive2 { name="CAMAN"; version="0.74"; sha256="0d932fbqzlxlhn7m8zfx7wr02pc7fm8398rym1jh2cdy2fk5im08"; depends=[mvtnorm sp]; }; CANSIM2R = derive2 { name="CANSIM2R"; version="1.14.1"; sha256="1dnzbd9lyqj3w80lx12qxcsbmv8wy6hxknyi5ijp99cfv7kaq1kc"; depends=[downloader Hmisc reshape2]; }; - CARBayes = derive2 { name="CARBayes"; version="5.1.3"; sha256="13l83wbacwg3mcl8njm872jaz9z15daj9qn5pb6w16iijcblk5ak"; depends=[CARBayesdata coda leaflet MASS matrixcalc MCMCpack Rcpp rgdal sp spam spdep truncnorm]; }; - CARBayesST = derive2 { name="CARBayesST"; version="3.0.2"; sha256="0gi5x0j1vzgkg8xhvsfqdvsn8n6dp6wzlzdsvf5sv9nydcdbac75"; depends=[CARBayesdata coda dplyr gtools leaflet MASS matrixcalc matrixStats Rcpp rgdal sp spam spdep testthat truncdist truncnorm]; }; + CARBayes = derive2 { name="CARBayes"; version="5.2"; sha256="08ajcgc0ycngcl2d757yjz1mpki88aq2jp07nr64j8aqpych5lw2"; depends=[CARBayesdata coda dplyr GGally leaflet MASS matrixcalc MCMCpack Rcpp rgdal sp spam spdep truncnorm]; }; + CARBayesST = derive2 { name="CARBayesST"; version="3.1"; sha256="12l4jdbaadnyngqphzc8fsspynryci9p9h6bl1196arqd5igax94"; depends=[CARBayesdata coda dplyr GGally ggplot2 gridExtra gtools leaflet MASS matrixcalc matrixStats Rcpp rgdal sp spam spdep testthat truncdist truncnorm]; }; CARBayesdata = derive2 { name="CARBayesdata"; version="2.1"; sha256="09rjxdrbpnqm6gv9g1jxh91jmww345wi9vlhb4s1n6b3xnh44fhs"; depends=[shapefiles sp]; }; CARE1 = derive2 { name="CARE1"; version="1.1.0"; sha256="1zwl4zv60mrzlzfgd7n37jjlr0j918a8ji36n94s5xw8wwipiznw"; depends=[]; }; CARLIT = derive2 { name="CARLIT"; version="1.0"; sha256="04kpjfps4ydf8fj75isqp16g1asdsyf8nszhbfkpw1zxkrmiksyp"; depends=[]; }; @@ -546,43 +549,44 @@ in with self; { CATT = derive2 { name="CATT"; version="2.0"; sha256="12xdspl1gbf51snyrl44nn7alfyccdfihibkgvzr66lrby8b8fhg"; depends=[]; }; CATTexact = derive2 { name="CATTexact"; version="0.1.0"; sha256="0mklkmay9ph4d0z2l1gcg0lj429xkyhmz7srdil5rgwqxx9dnqs8"; depends=[]; }; CATkit = derive2 { name="CATkit"; version="3.3.3"; sha256="01q2ssyg0jcjgahaslfgpakjsv2wil654lc6xrg5xbbrkx7ccb90"; depends=[assertr CombMSC Hmisc magic MASS png rtf season signal]; }; - CAWaR = derive2 { name="CAWaR"; version="0.0.1"; sha256="1z8xmwnxwlk0nhi22nabwzggizzsp8jzwfln0h2hkk7h1p8xjlhk"; depends=[fieldRS ggplot2 lubridate raster rgdal rgeos rsMove RStoolbox sp spatialEco]; }; CAinterprTools = derive2 { name="CAinterprTools"; version="1.0.0"; sha256="1ia4qfvj0nzxi6pwqnha2vpfcx3qwaw4vrjqiza11sai274j0pjy"; depends=[ca classInt cluster FactoMineR ggplot2 ggrepel Hmisc RcmdrMisc reshape2]; }; CAvariants = derive2 { name="CAvariants"; version="5.0"; sha256="0y87xg2iwsmn8klavapncd7vkqvl15z9crmx3ja56ksb36czn8kk"; depends=[ggplot2 ggrepel gridExtra]; }; CB2 = derive2 { name="CB2"; version="1.3.0"; sha256="050fpyj0zrgl03a2mdp9xrl72ad0d92kl7s9swgn2a7g8ca34c0k"; depends=[dplyr ggplot2 glue magrittr metap pheatmap R_utils Rcpp RcppArmadillo readr stringr tibble tidyr]; }; - CBCgrps = derive2 { name="CBCgrps"; version="2.6"; sha256="0kz7dqi5mbj4q6whdcizg85hw0ikdyb2vfh3xx1v40j09qv9w4vk"; depends=[nortest]; }; + CBCgrps = derive2 { name="CBCgrps"; version="2.7"; sha256="1hqndrz3snir3pibqsbyzgbllgmdiprgq27a31vl29vkswpiwwsm"; depends=[nortest]; }; CBDA = derive2 { name="CBDA"; version="1.0.0"; sha256="0qm77vvqjgi83i8izly995ziv9ski8kgzqyq4g81i2k7a5dp8vxv"; depends=[doParallel foreach prettydoc SuperLearner]; }; CBPS = derive2 { name="CBPS"; version="0.21"; sha256="0av9lgdn9z57xl9cp53pi9nq971a6fj4przczw7sdb5saml3yr30"; depends=[glmnet MASS MatchIt nnet numDeriv]; }; + CBSr = derive2 { name="CBSr"; version="1.0.3"; sha256="0lfs8p9nha1aq6dn6sd3pc9x0931zawxprpflfv9gqb8w7n1z4sd"; depends=[NlcOptim rJava]; }; CBT = derive2 { name="CBT"; version="1.0"; sha256="13h6sf7w03nfq2arqymwww13ywnv9xnqbqazlzn856mj3ggaqda7"; depends=[]; }; CC = derive2 { name="CC"; version="1.0"; sha256="189si37ggichqmzy8m686zw1cijix7yfy8ma5iqpnq1q9vm3pcvy"; depends=[]; }; CCA = derive2 { name="CCA"; version="1.2"; sha256="00zy6bln22qshhlll0y0adnvb8wa1f7famqyws71b6pcnwxki5ha"; depends=[fda fields]; }; CCAGFA = derive2 { name="CCAGFA"; version="1.0.8"; sha256="1jxb6d1h5p97wnr45s1fsspksqn771nib415ihxi4vj5w8s94j8b"; depends=[]; }; - CCAMLRGIS = derive2 { name="CCAMLRGIS"; version="3.0.1"; sha256="03wm2cbyvrrfh0f8jxxllqhm176xf06fnghwzakq5ivxpi5a1qsh"; depends=[dplyr geosphere magrittr raster rgdal rgeos sp]; }; + CCAMLRGIS = derive2 { name="CCAMLRGIS"; version="3.0.2"; sha256="0szk6z0nyw2f28q23qr69qrj35sy9qmdpvsqypm13drzv6vqlkqd"; depends=[dplyr geosphere magrittr raster rgdal rgeos sp]; }; CCM = derive2 { name="CCM"; version="1.2"; sha256="1mhl7yppniybdffylddbbb65n7gmv029fb46wlsxm4yf2xkplmwy"; depends=[]; }; CCP = derive2 { name="CCP"; version="1.1"; sha256="07jxh33pb8llk1gx4rc80ppi35z8y1gwsf19zrca9w91aahcs8cx"; depends=[]; }; CCTpack = derive2 { name="CCTpack"; version="1.5.2"; sha256="1kkxsk9x4jz2bvldmba7fsri3zc1cjz15z0xicjmfc7lj72ngdig"; depends=[MASS mvtnorm polycor psych R2jags rjags]; }; CCpop = derive2 { name="CCpop"; version="1.0"; sha256="10kgw3b98r0kn74w89znq6skgk8b3ldil6yb0hn5rlcf6lazjzca"; depends=[nloptr]; }; CDFt = derive2 { name="CDFt"; version="1.0.1"; sha256="0sc8ga48l3vvqfjq3ak5j1y27hgr5dw61wp0w5jpwzjz22jzqbap"; depends=[]; }; CDLasso = derive2 { name="CDLasso"; version="1.1"; sha256="0n699y18ia2yqpk78mszgggy7jz5dybwsi2y56kdyblddcmz1yv7"; depends=[]; }; - CDM = derive2 { name="CDM"; version="7.4-19"; sha256="1ln1r3rk004fmk55iy08bjh3vv4wnkb8zg2wj3r9rq7pi8jn8fv4"; depends=[mvtnorm polycor Rcpp RcppArmadillo]; }; + CDM = derive2 { name="CDM"; version="7.5-15"; sha256="159ny2dz0rf1r3k1mqlfwambffc8rx425sggf5bn51nybpzanq3l"; depends=[mvtnorm polycor Rcpp RcppArmadillo]; }; CDNmoney = derive2 { name="CDNmoney"; version="2012.4-2"; sha256="1isbvfq0lygs75y1hn3klqms8q7g1xbkcr8fgj75h1c99d4khvm6"; depends=[]; }; CDROM = derive2 { name="CDROM"; version="1.1"; sha256="0mvhqs4m8jp39x1rk31a1sqqmfq1avcnasgh8bizlyxx62igmi1b"; depends=[]; }; CDVine = derive2 { name="CDVine"; version="1.4"; sha256="0cp78pb6yny4n5q2j9k6xdql588536572gbphnw8zkdmrg65qyz7"; depends=[igraph MASS mvtnorm]; }; CDVineCopulaConditional = derive2 { name="CDVineCopulaConditional"; version="0.1.1"; sha256="1wyy324vrwipdsq0p021bj1gdhyxg09g3dkw8wv5v6rfrrs84m9k"; depends=[combinat VineCopula]; }; CEC = derive2 { name="CEC"; version="0.10.2"; sha256="03fxhqlpn7x3djfanlix3yzf1cy6zf854g70gq2d93ix9gis7knv"; depends=[]; }; CEGO = derive2 { name="CEGO"; version="2.4.0"; sha256="1rmx9ppiw7k5cznanz3m4lnhriz3fs4f7wk5h3q9wg9cyzfjhh38"; depends=[DEoptim fastmatch MASS Matrix ParamHelpers quadprog]; }; - CENFA = derive2 { name="CENFA"; version="1.0.0"; sha256="0ah8rh0gbwwhdfxzj9sj4i8iqbybkga09vinlh0r514ayv2qq2x8"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; + CENFA = derive2 { name="CENFA"; version="1.1.0"; sha256="03l0i24m2mh0gfmg7b48qg15zmfr8a39l1nswvmbmcj2a5hxybf4"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; }; CFC = derive2 { name="CFC"; version="1.1.2"; sha256="0k0685cgsd0lm7id6h216r4x236xn3nqj4h906qn2i0kvwmx4nda"; depends=[abind doParallel foreach Rcpp RcppArmadillo RcppProgress survival]; }; - CGE = derive2 { name="CGE"; version="0.2.8"; sha256="1bsrnrchwh2fjsx1gm8qx3f792ma5civw3w0j7is5lwyqff2q0cz"; depends=[]; }; + CFF = derive2 { name="CFF"; version="1.0"; sha256="04z3q0s4b1yns5l7lplw8qrcdjzsdy9crnhakyzd6r449hjfsvnz"; depends=[]; }; + CGE = derive2 { name="CGE"; version="0.3.0"; sha256="1cbspa81lp1j1ky5v2v0iiwwdlnvm7vndwfr6czhhwvv9dzcjiav"; depends=[]; }; CGGP = derive2 { name="CGGP"; version="1.0.1"; sha256="0vpj2bmij8wwckyzbmid6dyzpwy4jcbgpch3j143rag7pvgmc87q"; depends=[Rcpp RcppArmadillo]; }; - CGManalyzer = derive2 { name="CGManalyzer"; version="1.2"; sha256="1993hxpaplb2qxrjfnm63alks0wb3msrffycmwd9p9md5glzci9y"; depends=[]; }; + CGManalyzer = derive2 { name="CGManalyzer"; version="1.3"; sha256="1wmp5im18s447rjkj891skrm7558xkqlbx43n9hyxiqg49zq1ng9"; depends=[]; }; CGP = derive2 { name="CGP"; version="2.1-1"; sha256="05a6gydlb99yk2jpy2hyg4c30hqyp8dg2i9dmbjc1n5cmgpg3im9"; depends=[]; }; - CGPfunctions = derive2 { name="CGPfunctions"; version="0.5.7"; sha256="0afyv64kqmjsymnp9vzn55zn8qri2ic4mhsc77rf5s1jzamcgjlp"; depends=[broomExtra car DescTools devtools dplyr ggplot2 ggrepel pwr rlang scales sjstats tibble]; }; + CGPfunctions = derive2 { name="CGPfunctions"; version="0.5.9"; sha256="0rri1kj3b6hai18pz0ihqapli4b84l5y2x6msf73z1gyag3xl9fa"; depends=[BayesFactor broom car DescTools dplyr forcats ggplot2 ggrepel paletteer partykit purrr rlang scales sjstats stringr tidyr]; }; CHCN = derive2 { name="CHCN"; version="1.5"; sha256="18n8f002w0p0l1s5mrrsyjddn10kdbb6b7jx1v9h1m81ifdbv0xb"; depends=[bitops RCurl]; }; CHFF = derive2 { name="CHFF"; version="0.1.0"; sha256="0jv75p1bnwsad2vpxf1zwq97al9xxhk2hpnpsilf0jn0w7g9b2d3"; depends=[]; }; CHMM = derive2 { name="CHMM"; version="0.1.1"; sha256="07fdvnwhblwvljbl2z0vs42nwki67yl5ly3fj40p50k3rnqqmavj"; depends=[mclust]; }; - CHNOSZ = derive2 { name="CHNOSZ"; version="1.3.4"; sha256="01kvqyissybg28c275a2is9v45jrv20ggsz3z6qga2r9kr13a3c7"; depends=[]; }; + CHNOSZ = derive2 { name="CHNOSZ"; version="1.3.6"; sha256="0imfyvagvxqffvz3ksvkmfc2lbfli5lsxvnqby7iw2dp1gzpaxqc"; depends=[]; }; CHsharp = derive2 { name="CHsharp"; version="0.4"; sha256="19mb5zzi9x4pm2z9jbha5dz4k5f1iqjv31aisyv4qh14k5ysdz2i"; depends=[KernSmooth scatterplot3d]; }; CIAAWconsensus = derive2 { name="CIAAWconsensus"; version="1.3"; sha256="0yhay4fp5lyf0sdcf807yvys17qz9cr5f5ikim25mq336p7fp03x"; depends=[Matrix mvtnorm numDeriv stringr]; }; CIEE = derive2 { name="CIEE"; version="0.1.1"; sha256="03kq9cp0v41y0r2l9j5imcrsail2xsvlzhhhsrw454d4s9gqdql9"; depends=[survival]; }; @@ -602,9 +606,8 @@ in with self; { CLSOCP = derive2 { name="CLSOCP"; version="1.0"; sha256="0rkwq9rl2ph4h5zwb2i3yphjyzxmh6b6k23a8gcczycx6xdq4yhw"; depends=[Matrix]; }; CLUSTShiny = derive2 { name="CLUSTShiny"; version="0.1.0"; sha256="19mh5g1ylvlab4xjxw7girxk9zkpxxczhbfijf11b592hbw0qxqk"; depends=[cluster dplyr klaR MASS psycho rmarkdown shiny]; }; CMC = derive2 { name="CMC"; version="1.0"; sha256="1r9a5k79fyw01yiwxq02327hpn4l1v2lp0958jj9217wxmhn3pr5"; depends=[]; }; - CMF = derive2 { name="CMF"; version="1.0"; sha256="0hvqcbmg2vd0i1rjb1m1bkrbv2vkj1siank1v8w0n5b6881cyz7q"; depends=[Rcpp]; }; + CMF = derive2 { name="CMF"; version="1.0.2"; sha256="0hm6srsylg1syz86iz93qyxr7xgh1qvmp27k2hgkj1z1z8lsw1ca"; depends=[Rcpp]; }; CMLS = derive2 { name="CMLS"; version="1.0-0"; sha256="1542qqsl6sksrcpwhnn55d260hkbmy4ikd0v2an96yxk5w95spvn"; depends=[quadprog]; }; - CMPControl = derive2 { name="CMPControl"; version="1.0"; sha256="0cp29cibiydawsl0cq433l9abdivr16b431zlrh45wzr5kzfcs0v"; depends=[compoisson]; }; CMShiny = derive2 { name="CMShiny"; version="0.1.0"; sha256="0ciis3930yhn4dmazsg2yp7wi9hdfj5slr032x8qfllxis7m4k0w"; depends=[caret e1071 epitools Matrix rmarkdown shiny shinyMatrix]; }; CMapViz = derive2 { name="CMapViz"; version="0.1.0"; sha256="1s7xyp13p7fpbq0bghk07dfv90339kxs7k3343jqhrn8djf3as67"; depends=[dplyr ggplot2 readxl reshape2 scales stringr]; }; CMatching = derive2 { name="CMatching"; version="2.3.0"; sha256="0q0hplhsamj46z7g6pa7yg1bap5822ka1419yhcip551djhvnpmv"; depends=[lme4 lmtest Matching multiwayvcov]; }; @@ -618,12 +621,11 @@ in with self; { COBRA = derive2 { name="COBRA"; version="0.99.4"; sha256="1r1cw12d7c148pcgcg08bfsr1q1s736kfpyyss6b4d7ny7wgmqy4"; depends=[]; }; COCONUT = derive2 { name="COCONUT"; version="1.0.2"; sha256="1qjrhxn6dkxyimdca3nslaiw3hncfpk1pk4v01mcrnz550z001nz"; depends=[]; }; COMBAT = derive2 { name="COMBAT"; version="0.0.4"; sha256="0m700pl33frdpc9y16y4zyh1ixpardh0r5kmz8a78jrh1acn30id"; depends=[corpcor mvtnorm]; }; - COMBIA = derive2 { name="COMBIA"; version="1.0.6"; sha256="1640bfl5sn00czxnl6j2rrdrzc5arvfpy5b66viybxm2qqbiw49w"; depends=[gdata hash lattice latticeExtra oro_nifti]; }; COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.7.0"; sha256="144vf3vfn5msc8p67q65frza8xyi9nqccjq47fnv33w5h0d9wlxj"; depends=[Rcpp]; }; CONDOP = derive2 { name="CONDOP"; version="1.0"; sha256="0si9nm93wk9lif3r6jh2nxr4sjq1iqyfavbykja3zcy6yn05i19s"; depends=[earth GenomeInfoDb GenomicRanges IRanges mclust plyr randomForest rminer S4Vectors seqinr]; }; CONS = derive2 { name="CONS"; version="0.1.1"; sha256="0w0rca4z3hij0lbabpdnhv2lb52gx574g7bqp6q16772pi4685hf"; depends=[FactoMineR gridExtra gWidgets pander raster readxl REdaS]; }; CORE = derive2 { name="CORE"; version="3.0"; sha256="0wq9i7nscnzqiqz6zh6hglm7924261bw169q3x6l9i6jgqhvn32d"; depends=[]; }; - CORElearn = derive2 { name="CORElearn"; version="1.53.1"; sha256="01jjw32awqjlvrn2wanljr3v4nphjb8mknzmz4skyhx0zgdm369x"; depends=[cluster nnet rpart]; }; + CORElearn = derive2 { name="CORElearn"; version="1.54.2"; sha256="0nsqmmwngv04dp4wpm9irybiv7bk35x78b8ib4mgk11yzm0wl1nn"; depends=[cluster nnet plotrix rpart rpart_plot]; }; CORM = derive2 { name="CORM"; version="1.0.2"; sha256="0g5plafx2h1ija8jd6rxvy8qsrqprfbwbi1kq1p4jdr9miha20nv"; depends=[cluster limma]; }; COSINE = derive2 { name="COSINE"; version="2.1"; sha256="10ypj849pmvhx117ph3k1jqa62nc4sdmv8665yahds7mh0ymhpjj"; depends=[genalg MASS]; }; COST = derive2 { name="COST"; version="0.1.0"; sha256="06xgnsccd621ihlrdmnnh14vh83q1r2bnp3iqi7vp5553b3y4l3w"; depends=[copula mvtnorm]; }; @@ -646,14 +648,16 @@ in with self; { CRPClustering = derive2 { name="CRPClustering"; version="1.2"; sha256="19m7jg6ck2gqmry2p35h3vv8msm4w1x7qwwmm746r646q7w9ylml"; depends=[dplyr lucid MASS mvtnorm png randomcoloR]; }; CRTSize = derive2 { name="CRTSize"; version="1.0"; sha256="1d45zx26bf0zk0piham69gvb8djqf48g6iisbldv0ds3s2hhcsin"; depends=[]; }; CRTgeeDR = derive2 { name="CRTgeeDR"; version="2.0"; sha256="1fzw8618k152b8d4d6wmzp0bfkz2grwp0rqsplwvfdx23nxq437n"; depends=[ggplot2 MASS Matrix]; }; + CRUF = derive2 { name="CRUF"; version="0.5.1"; sha256="0mx7ksd5csy7v7v0wacfafs84sdfd41sy3f0yzpis9f07r7pqp3w"; depends=[aod miceadds survival survminer]; }; CRWRM = derive2 { name="CRWRM"; version="0.0.1"; sha256="0w6lg5q2c0w5p9vg5qr32pycyl8d1zp0s55jlvf2xhmqx34677hd"; depends=[]; }; CSESA = derive2 { name="CSESA"; version="1.2.0"; sha256="0pv6iabq1w22qbhlsbckdvva4n7igpzrjnrahmq83a6wxgvjbf5j"; depends=[Biostrings]; }; CSFA = derive2 { name="CSFA"; version="1.2.0"; sha256="1nkyhk8qhrrlx8v26yw86l954m4xfcxma4pqbhgw95jvqql5h3li"; depends=[elasticnet fabia FactoMineR pls randomcoloR snowFT]; }; + CSMES = derive2 { name="CSMES"; version="1.0.0"; sha256="1ddr2b39d7nwan6dqf5xx9h6gzfxxk50r1d9vbpb9hc8a7d15vnp"; depends=[caTools data_table mco ROCR rpart zoo]; }; + CSTools = derive2 { name="CSTools"; version="3.0.0"; sha256="1gdvkpq8iji0kxlk4ka10kq7i2qn3r5jcg2c5isf3zjkyjn2f218"; depends=[abind ClimProjDiags data_table ggplot2 maps multiApply ncdf4 plyr qmap rainfarmr reshape2 s2dverification verification]; }; CSclone = derive2 { name="CSclone"; version="1.0"; sha256="0lqsqsgh2sf44fr1r7g179556v294yr1wy7x4320g7adxshrwyh5"; depends=[DNAcopy lpSolve mcclust moments]; }; CSeqpat = derive2 { name="CSeqpat"; version="0.1.2"; sha256="1nqk873cagpn4fba4rmyzb6hni1p5lqcvsr9givrcm0gfx756w1h"; depends=[NLP tm]; }; CTAShiny = derive2 { name="CTAShiny"; version="0.1.0"; sha256="18qw8nx1r4gwlxj9zxn4hllpn29fv3i4fgwyl5fh3qsv9hmbvi0x"; depends=[epitools rpivotTable shiny shinyMatrix]; }; CTM = derive2 { name="CTM"; version="0.2"; sha256="0h1lpygjq46nwkn4km49bngvxmgrnh3csrfln3yjr9yyzs7d3lz1"; depends=[jiebaR plyr]; }; - CTRE = derive2 { name="CTRE"; version="0.1.0"; sha256="1v2327g78rva3n7lvn66rznzzf2qbdak0jp8gakgljpl30kpkv5v"; depends=[assertthat MittagLeffleR plyr tea zoo]; }; CTShiny = derive2 { name="CTShiny"; version="0.1.0"; sha256="0lmzf02w8j4rgz1kh7jwvl0sb6y38r56gwmsf7pkc00w1dskb722"; depends=[caret dplyr e1071 party rhandsontable rmarkdown rpart rpart_plot shiny]; }; CTT = derive2 { name="CTT"; version="2.3.3"; sha256="02z354gf7rzh9xzyflmsag4hgmqgv3sr9s9ja903rwdz1pjqrlff"; depends=[]; }; CTTShiny = derive2 { name="CTTShiny"; version="0.1"; sha256="1c9vsiqyig6kfjpy3dfrysc466h4v9530m49aynz65i1njplswyh"; depends=[CTT ltm psych shiny shinyAce]; }; @@ -661,18 +665,18 @@ in with self; { CUB = derive2 { name="CUB"; version="1.1.3"; sha256="1qdqqiax9yc0vzcqkkzx81nb7gix0x5pknvbqp1xv200776wsfc4"; depends=[Formula]; }; CUFF = derive2 { name="CUFF"; version="1.6"; sha256="06ip6jrw6zgysz1lhlxxj26bv6hwg87qx6spqfinqrc9lz3p1y93"; depends=[DT lmerTest nlme openxlsx xtable]; }; CUMP = derive2 { name="CUMP"; version="2.0"; sha256="0rdscywmi4sylpjpr8r472iapddizb1mqyrd532cvw6frxins7w0"; depends=[]; }; - CUSUMdesign = derive2 { name="CUSUMdesign"; version="1.1.3"; sha256="149d16d5y7zxkzq8gmb5spfrvirv0vyhk2qx0v7vclkr8adz9sva"; depends=[]; }; + CUSUMdesign = derive2 { name="CUSUMdesign"; version="1.1.5"; sha256="1qxq1a8b5pnmlq6rpjzvcp32scn2qknafch3h7qjsy8499zzbxx8"; depends=[]; }; CVD = derive2 { name="CVD"; version="1.0.2"; sha256="0agb0liwbp4wvmxbyxgfb7471ki1agfb6ssh77kvwbkxqmrc8d96"; depends=[]; }; CVR = derive2 { name="CVR"; version="0.1.1"; sha256="1y8m9r409jq5h6xx1rvz7c7aj882jldfxly89zf3cvp2qg3jh7rj"; depends=[PMA Rcpp RcppArmadillo]; }; CVST = derive2 { name="CVST"; version="0.2-2"; sha256="05l3yzkfrbds09ah9cdwn2sn4ryhq78lz33ryzrgkv176jc8qjw5"; depends=[kernlab Matrix]; }; CVThresh = derive2 { name="CVThresh"; version="1.1.1"; sha256="19d7pslzj8r3z5gn3cplpz2h2ayz6k1nrfx3s2b7a8w1il3vmi69"; depends=[EbayesThresh wavethresh]; }; CVTuningCov = derive2 { name="CVTuningCov"; version="1.0"; sha256="1bwzis82lqwcqp2djy4bnd3vvjr47krlv3pdc5msh12wcs0xhs7n"; depends=[]; }; - CVXR = derive2 { name="CVXR"; version="0.99-7"; sha256="0jbw4gxcjrmzdm2681nfci34mkf16b9w6xi5slq6l5x273rfjh5v"; depends=[bit64 ECOSolveR gmp Matrix R_utils R6 Rcpp RcppEigen Rmpfr scs]; }; + CVXR = derive2 { name="CVXR"; version="1.0"; sha256="0p8zyy3lc3rgvrkncf811qlllm5hs8cfc7r1bf35vc5fwsrrx73b"; depends=[bit64 ECOSolveR gmp Matrix osqp R6 Rcpp RcppEigen Rmpfr scs]; }; CVcalibration = derive2 { name="CVcalibration"; version="1.0-1"; sha256="0ca582fnysrldlzxc3pihsph9pvdgygdh7sfzgxvr5fc3z1jbjzb"; depends=[]; }; CVglasso = derive2 { name="CVglasso"; version="1.0"; sha256="1bh09cd0yabhqv5yfahhvayx3f09yqapzl1yr9nc9xqwyx1d0cfd"; depends=[doParallel dplyr foreach ggplot2 glasso]; }; CaDENCE = derive2 { name="CaDENCE"; version="1.2.5"; sha256="1z3p5y1l67r470x6wrhnyjvw1ndppcm08fpj99x122j7kn6byff2"; depends=[pso]; }; CaPO4Sim = derive2 { name="CaPO4Sim"; version="0.1.0"; sha256="1ihkx0swj9adz2pgfm9c20pcipq748czkyg76q3y0zk1j987nfik"; depends=[DT htmltools magrittr plotly purrr rintrojs shiny shinycssloaders shinydashboard shinydashboardPlus shinyjqui shinyjs shinyWidgets visNetwork]; }; - Cairo = derive2 { name="Cairo"; version="1.5-10"; sha256="1mdmd5zmjkh1b0x928zizgzh42x8swbajffb88rvnjfdhk1z0dvq"; depends=[]; }; + Cairo = derive2 { name="Cairo"; version="1.5-11"; sha256="1k9kpxcg5n4g6x2gydv344f4w0snqbhww14fnbbj1bny0mmv28xg"; depends=[]; }; CalSim = derive2 { name="CalSim"; version="0.3.2"; sha256="1a4w9kh9ykms1i30hhd7h8gdkbfl6g071jmcy26j1sbshxrnq8s1"; depends=[spatstat]; }; Calculator_LR_FNs = derive2 { name="Calculator.LR.FNs"; version="1.3"; sha256="03qg9rnz623dwnp68xhhsh9788s49n6xp0migg1nnjaqhrahlgdd"; depends=[]; }; CalibratR = derive2 { name="CalibratR"; version="0.1.2"; sha256="1hnmhijckxd35h8mhpzqpglk1ykdih2c5kg17myc7cci5xjk9nfr"; depends=[doParallel fitdistrplus foreach ggplot2 pROC reshape2]; }; @@ -680,11 +684,13 @@ in with self; { CamelUp = derive2 { name="CamelUp"; version="0.1.1"; sha256="09i6bi2vnd7iyll9s8sbyy73l6kq8xrpf07qbcahs595x5iclgrg"; depends=[data_table R6 shiny shinyalert tidyverse]; }; Canopy = derive2 { name="Canopy"; version="1.3.0"; sha256="0979hpphzhf4v71jx0shh3l8nffmpsn9l6f8ip2wxzcyx571i1wd"; depends=[ape fields pheatmap scatterplot3d]; }; CarletonStats = derive2 { name="CarletonStats"; version="2.0"; sha256="0pgzvw6gf8kjv8ndprwp4wlgdgh5sb75ga8z5syfw57fb05v7ac3"; depends=[]; }; + Carlson = derive2 { name="Carlson"; version="1.0.0"; sha256="1m030x30cd0w2r6y280v9kpqalx6djhyx9hfzhk1qbqh5rk7br2l"; depends=[]; }; Cascade = derive2 { name="Cascade"; version="1.8"; sha256="0d75a9f43ligyjv62476plb86ipfq9y7g9njq4rx84cp17vbb662"; depends=[abind animation cluster igraph lars lattice limma magic nnls survival tnet VGAM]; }; CascadeData = derive2 { name="CascadeData"; version="1.2"; sha256="0czc41f1vj61rkdl6gnnnga3qliyxp0ffl5j9wrhrlwnbdaknics"; depends=[]; }; CatDyn = derive2 { name="CatDyn"; version="1.1-1"; sha256="0gkaxs7apqhq7mp3chjsyhrnk3qkk11f8p7smmyj6h73888ry8jn"; depends=[BB optimx]; }; CatEncoders = derive2 { name="CatEncoders"; version="0.1.1"; sha256="1q9wzq06lac8z9y8b65alsxpb48bw8wqmifd893kknk51xq6r9kl"; depends=[data_table Matrix]; }; CatPredi = derive2 { name="CatPredi"; version="1.1"; sha256="1fqz2mb3xhpzvamf0bpqfql3vd86vq6fq7n6p8xq7lraj1w77lys"; depends=[CPE mgcv rgenoud rms survival]; }; + CatReg = derive2 { name="CatReg"; version="1.0.0"; sha256="10qvp3v8bwsynxxl1a6qkp9ddfqygjc0cm1nbxi86dwyi26mcvz0"; depends=[Rcpp Rdpack]; }; CateSelection = derive2 { name="CateSelection"; version="1.0"; sha256="194lk6anrb05gaarwdg8lj5wm6k61b4r702cja3nf3z91i8paqi7"; depends=[]; }; CausalFX = derive2 { name="CausalFX"; version="1.0.1"; sha256="0v0diqq9fa1v9n3v5m5shvwlgmj91cbbb78243rwib1h3pyacihf"; depends=[igraph rcdd rje]; }; CausalGAM = derive2 { name="CausalGAM"; version="0.1-4"; sha256="1riz11hfg96iks7734rg692l75nfrd3hmr9gw563j27rkk1nfkl6"; depends=[gam]; }; @@ -692,18 +698,17 @@ in with self; { CausalKinetiX = derive2 { name="CausalKinetiX"; version="0.2.1"; sha256="0haxw4vvbw48hlvsl1d1y3xm48qm5vl0d3k5lj89ajwc618nk5jg"; depends=[cvTools deSolve fda glmnet pspline quadprog randomForest sundialr]; }; Causata = derive2 { name="Causata"; version="4.2-0"; sha256="04lndjy4rdf063z75zv42b000z06ffnr91pv2sql1ks6w60zmh1m"; depends=[boot data_table foreach ggplot2 glmnet R_utils RCurl rjson RMySQL stringr XML yaml]; }; CautiousLearning = derive2 { name="CautiousLearning"; version="1.0.1"; sha256="1m5x93l4bscrpcxk0pva6d6n2qnzhzxh0a6a81p97l8lqgs1qw2q"; depends=[BH Rcpp sitmo spc]; }; - CePa = derive2 { name="CePa"; version="0.6"; sha256="1qpxx9x656g678wp190q29vxkb54sfkalg0csg0ndlcvi03dvl3d"; depends=[graph igraph Rgraphviz]; }; + CePa = derive2 { name="CePa"; version="0.7.0"; sha256="0jykh0f168azphjd3h1q81wlvj8zn8qy0c4wi275gvw0xwi104mk"; depends=[graph igraph Rgraphviz]; }; CeRNASeek = derive2 { name="CeRNASeek"; version="2.1.2"; sha256="1bjx474wbxs4wxy6j4n578cggmcj0061kbbkyhfif65qbsfgrcf8"; depends=[gtools igraph survival]; }; + CenBAR = derive2 { name="CenBAR"; version="0.1.0"; sha256="0qa1jzgvf33fi0vns7v49hjk0wkaxic7dw67m0wr33wjplf93wnh"; depends=[cvTools foreach glmnet MASS mvtnorm survival]; }; CensMFM = derive2 { name="CensMFM"; version="2.0"; sha256="1p129x2b6avv7h5ifjmkds2yfw0jwm3q1cqyrpy8j9nkli0crg1y"; depends=[ggplot2 gridExtra MomTrunc mvtnorm tlrmvnmvt]; }; - CensMixReg = derive2 { name="CensMixReg"; version="3.1"; sha256="1r7w84bjdxnkhiw7gh499scc6m3ba9b2a8cwayn6sg5a524yn9gs"; depends=[ClusterR mixsmsn mnormt mvtnorm trimcluster]; }; CensRegMod = derive2 { name="CensRegMod"; version="1.0"; sha256="0qqwkxn8knhcjb6mph7mp7mma56zxslbvkfgfajq2lq4gbg901y4"; depends=[]; }; - CensSpatial = derive2 { name="CensSpatial"; version="2.1"; sha256="19nlvg61gcn9mf6nsd0ji7b05vh2qzlszif5bmm8bqxzf8wmilx3"; depends=[geoR lattice moments msm mvtnorm numDeriv optimx psych raster tlrmvnmvt tmvtnorm]; }; Census2016 = derive2 { name="Census2016"; version="0.2.0"; sha256="1c88jmd565v19w8dbvai10f9y5lyfmzsxsjblc3gdykf9kharvcq"; depends=[data_table]; }; CepLDA = derive2 { name="CepLDA"; version="1.0.0"; sha256="15vhk7l5mw2kicw2x60r4z71hc415g8kaf2p06jgf7ykxmzkj7kg"; depends=[astsa class MASS multitaper]; }; CerioliOutlierDetection = derive2 { name="CerioliOutlierDetection"; version="1.1.9"; sha256="0s3pd4y165v69m4wmg9jlc7dl4gz64la9yic67l3n4242wa84p19"; depends=[robustbase]; }; CfEstimateQuantiles = derive2 { name="CfEstimateQuantiles"; version="1.0"; sha256="1qf85pnl81r0ym1mmsrhbshwi4h1iv19a2wjnghbylpjaslgxp6i"; depends=[]; }; ChIPtest = derive2 { name="ChIPtest"; version="1.0"; sha256="1yn5b5s56k2dbhw6damxj18xbaiz180ym7fiq2i3p2gkcgwpddbz"; depends=[]; }; - ChainLadder = derive2 { name="ChainLadder"; version="0.2.10"; sha256="1mhmmxdy94qchsw8pc86hk78iwb9l3pfhljalxidk62f3qikrjxb"; depends=[actuar cplm ggplot2 lattice MASS Matrix statmod systemfit tweedie]; }; + ChainLadder = derive2 { name="ChainLadder"; version="0.2.11"; sha256="0qqfvhgybdp6l74nswc6xcilzbv54291p8mwjvdhjg29782szyyz"; depends=[actuar cplm ggplot2 lattice MASS Matrix statmod systemfit tweedie]; }; ChangepointTesting = derive2 { name="ChangepointTesting"; version="1.0"; sha256="1nb78b1jpp0wpy9ah2fxkh53hlmb2f82b68msbfhancb8zp2lclv"; depends=[]; }; ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.16"; sha256="02kxybv9299j36xl4wk6d50crdnz0f6qbyxjiy6xf0s7hnlcr44c"; depends=[Rcpp RcppArmadillo]; }; ChannelAttributionApp = derive2 { name="ChannelAttributionApp"; version="1.1"; sha256="0qy92ij1riynz7dhri3z85pafww5w9j1gx1bcgr8phlr32a7had7"; depends=[ChannelAttribution data_table ggplot2 shiny]; }; @@ -712,15 +717,15 @@ in with self; { ChargeTransport = derive2 { name="ChargeTransport"; version="1.0.2"; sha256="0mq06ckp3yyj5g1z2sla79fiqdk2nlbclm618frhqcgmq93h0vha"; depends=[]; }; CheckDigit = derive2 { name="CheckDigit"; version="0.1-1"; sha256="0091q9f77a0n701n668zaghi6b2k3n2jlb1y91nghijkv32a7d0j"; depends=[]; }; ChemoSpec = derive2 { name="ChemoSpec"; version="5.2.12"; sha256="1qr09n2yc009x8ag0lbmn1m93qhck05jc8vx7j5wfa0g4i1b2r7f"; depends=[ChemoSpecUtils plyr readJDX]; }; - ChemoSpec2D = derive2 { name="ChemoSpec2D"; version="0.3.166"; sha256="0b0pis55kz4r55qxwdlic87crnhkifvcylngkaxsfv1vqqz2wwlc"; depends=[ChemoSpecUtils]; }; + ChemoSpec2D = derive2 { name="ChemoSpec2D"; version="0.4.147"; sha256="0rmnkk9ddxr32l09bj8qkh1jpffwkyczjr6vwk1qliwfwsbc78rl"; depends=[ChemoSpecUtils colorspace readJDX]; }; ChemoSpecUtils = derive2 { name="ChemoSpecUtils"; version="0.4.38"; sha256="1b7czs41jsniw1hnrm1c5z6pc5yiybbdnp2bqr810farmv61slzz"; depends=[plyr]; }; ChemometricsWithR = derive2 { name="ChemometricsWithR"; version="0.1.13"; sha256="166va1g3m1wv21qkmw4wpz0bsrclh3jih8smxphdc13l9pqgclpq"; depends=[devtools kohonen MASS pls]; }; ChillModels = derive2 { name="ChillModels"; version="1.0.2"; sha256="06hgg893anh5z8an4l1xl4liz7d0m79n21h116vkdlymayccydbr"; depends=[]; }; ChoR = derive2 { name="ChoR"; version="0.0-4"; sha256="08mildsx542zfm0kcdakcv7c71hb4jgbcq1lhidf0fz76zj1pzk1"; depends=[commonsMath rJava]; }; ChoiceModelR = derive2 { name="ChoiceModelR"; version="1.2"; sha256="0dkp3354gvrn44010s8fjbmkpgn1hpl4xbfs5xslql8sk8rw0n2c"; depends=[]; }; CholWishart = derive2 { name="CholWishart"; version="1.1.0"; sha256="1p92i5ibv9805fg8s5wrpxx63k4c1ihs1x2zlaz9vbkqypkl8aqz"; depends=[]; }; - CircMLE = derive2 { name="CircMLE"; version="0.2.2"; sha256="0qavd67295ca8jrwllkgjp5b84kxf4pik226pm9y126bz3rss9a1"; depends=[circular]; }; - CircNNTSR = derive2 { name="CircNNTSR"; version="2.2"; sha256="0z29dsvcwpra1ny8kj486dpnrak272wmkfnaiyashzcqpnkmkg03"; depends=[]; }; + CircMLE = derive2 { name="CircMLE"; version="0.2.3"; sha256="02nhxw75w84m95p3hmkcgbrs547scvfap8130fxm480y0r3d0zc6"; depends=[circular]; }; + CircNNTSR = derive2 { name="CircNNTSR"; version="2.2-1"; sha256="0mpm6vrkl3ap67khky8dndwvl9yzycm0rlv0vzznlygvlsg8sc38"; depends=[]; }; CircOutlier = derive2 { name="CircOutlier"; version="3.2.3"; sha256="1vyac4mjkn6p4p9n5finqqak6g7m3hj04a66v3w797jn1wbd1xly"; depends=[CircStats circular]; }; CircSpaceTime = derive2 { name="CircSpaceTime"; version="0.9.0"; sha256="0dplgm5x4c1xxnv6062n643mn5zh0najw3f41pv2qafc1lil4wx8"; depends=[circular coda ggplot2 Rcpp RcppArmadillo RInside]; }; CircStats = derive2 { name="CircStats"; version="0.2-6"; sha256="07bg4zrs2iqh0pmi44pybi8hlvnxwcaa5zpg85rmf55kflxxkzlf"; depends=[boot MASS]; }; @@ -728,7 +733,7 @@ in with self; { Cite = derive2 { name="Cite"; version="0.1.0"; sha256="1gfjirhswh4dkz88z4gl8m8jznqrvcgd4z3mnszyg1k5w3avlf1q"; depends=[miniUI RefManageR rstudioapi shiny]; }; CityPlot = derive2 { name="CityPlot"; version="2.0"; sha256="0lskgxmagqjglvpq39hgbygkf4qp28i2bj6b4m2av1s3pzb4465g"; depends=[]; }; CityWaterBalance = derive2 { name="CityWaterBalance"; version="0.1.0"; sha256="0nvm6bv2cxszjf33xgn1xcvhrgrgbdcar0jahwf7bs03gdlpmgi1"; depends=[dataRetrieval dplyr EcoHydRology geoknife lubridate reshape2 tgp xts zoo]; }; - Ckmeans_1d_dp = derive2 { name="Ckmeans.1d.dp"; version="4.3.0"; sha256="0xl587a4yym2a8b1csdgrj6fmggb3084pj3p7z4hqr2pq5jdyadk"; depends=[Rcpp Rdpack]; }; + Ckmeans_1d_dp = derive2 { name="Ckmeans.1d.dp"; version="4.3.2"; sha256="18ypkjhgxdpcannddch9ipvf3xl3pwx6cgf3983p81cr15s0zgrz"; depends=[Rcpp Rdpack]; }; Claddis = derive2 { name="Claddis"; version="0.3.4"; sha256="161qgj4r8qah3r1m7gx2rwn9ng62y1p6gn62r1gp43pkrp2jlqj9"; depends=[ape clipr gdata phytools strap]; }; ClamR = derive2 { name="ClamR"; version="2.1-1"; sha256="0raz1n79g24a9mc93zj49r20xcmdziw6vvcw5sd3qyjp1ycia13c"; depends=[]; }; ClassComparison = derive2 { name="ClassComparison"; version="3.1.8"; sha256="0fd5s4697pvj295fzvvn5mislf42wfzrcvks17v98388rph586gl"; depends=[Biobase oompaBase]; }; @@ -740,12 +745,13 @@ in with self; { ClimClass = derive2 { name="ClimClass"; version="2.1.0"; sha256="1r836md31z2r5d9xckkbalzbhm4kf5paljv71kxpy53q92k7yi91"; depends=[geosphere ggplot2 reshape2]; }; ClimDown = derive2 { name="ClimDown"; version="1.0.2"; sha256="0dbv5vn985bi9nqxhq7jcj6k38s8dlbqnln3adgd0ih2fwilvalg"; depends=[abind fields foreach ncdf4 PCICt seas udunits2]; }; ClimInd = derive2 { name="ClimInd"; version="0.1-2"; sha256="0brimmkr8ccdbpmcmgbd8ydx4cy0yblfrzcgx151x83wskzq04sj"; depends=[chron SPEI weathermetrics]; }; - ClimMobTools = derive2 { name="ClimMobTools"; version="0.2-7"; sha256="0y2dhf7j230hvsi54dl08ds170ad7aww4c8gk0f5c2v2zfxkbya8"; depends=[httr jsonlite Matrix nasapower PlackettLuce raster RSpectra tibble tidyr]; }; + ClimMobTools = derive2 { name="ClimMobTools"; version="0.3.2"; sha256="1nsisbqsgwk91by6bx8igf1bn94cbcvnw9dbs7gfb14wnng2422l"; depends=[climatrends httr jsonlite Matrix RSpectra tibble]; }; ClimProjDiags = derive2 { name="ClimProjDiags"; version="0.1.0"; sha256="00w7ffcv9axddjvmc0w58c9ncy8z58lf651c5pxsq7492x3vifcm"; depends=[multiApply PCICt plyr]; }; ClinReport = derive2 { name="ClinReport"; version="0.9.1.14"; sha256="140hpg6ybz1rlql06gk851fcvlb2k53kp46dq22cbs36frggk3rj"; depends=[car dplyr emmeans flextable ggplot2 lme4 officer reshape2 xtable]; }; ClinicalTrialSummary = derive2 { name="ClinicalTrialSummary"; version="1.1.1"; sha256="0b5by4sn9yvrvxr9921yqsgp8ma3g1hi2qbp5j9m836db1zjhyla"; depends=[Rcpp]; }; CliquePercolation = derive2 { name="CliquePercolation"; version="0.2.0"; sha256="1zllhl1674734sr0hmfgwdyqlk4rcjdqqrd7rx30llqri478jdff"; depends=[colorspace igraph magrittr Matrix Polychrome qgraph]; }; CloneSeeker = derive2 { name="CloneSeeker"; version="1.0.9"; sha256="0xcdknh2fibg86h2ip8jzsv4sbai1yl19ni3g1h5p0zlyigkhs1s"; depends=[combinat gtools quantmod]; }; + CluMP = derive2 { name="CluMP"; version="0.8"; sha256="130aqfxdp1pj5z3hnmy06rp5ywcmr389wn114ja5c2imxxkm3fi3"; depends=[amap data_table dplyr ggplot2 MASS NbClust rlang tableone]; }; ClueR = derive2 { name="ClueR"; version="1.4"; sha256="0awl3ag48idg0396hcgqrh5f16mbgximr5xbxjiimib5zysdc558"; depends=[e1071]; }; ClusBoot = derive2 { name="ClusBoot"; version="1.0"; sha256="1wh9mv932zarl8w098lgv2jpanp6r8nzdkyayv8nxk7nddl0bn1k"; depends=[]; }; ClusVis = derive2 { name="ClusVis"; version="1.2.0"; sha256="06yckdl3gxjia1gjjqpc29lvy4f7qf47fncslng9ggjnks6il145"; depends=[MASS mgcv mvtnorm Rcpp RcppArmadillo Rmixmod VarSelLCM]; }; @@ -757,7 +763,7 @@ in with self; { ClustOfVar = derive2 { name="ClustOfVar"; version="1.1"; sha256="0grhkab7s58ji4cf7cxh7ahd2dxrj8aqfdf3119b40zxkxbwxcr0"; depends=[PCAmixdata]; }; ClustVarLV = derive2 { name="ClustVarLV"; version="2.0.1"; sha256="1wl4kkhf17fi3vgbv0ph0yii2l93cgisxm3s0g9w8zhyn60dwwb0"; depends=[doParallel foreach iterators plyr Rcpp RcppEigen]; }; Cluster_OBeu = derive2 { name="Cluster.OBeu"; version="1.2.3"; sha256="10i7mnaq968my1c5hi8bdsj05m64wlmrf4n4m118is5h1q7zss8r"; depends=[car cluster clValid data_tree dendextend jsonlite mclust RCurl reshape reshape2 stringr]; }; - ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="1.0.0"; sha256="0m1lfp27vn3ybwimwkrihff5v2bvdc4c46x8bha8hw0wma14lw5i"; depends=[]; }; + ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="1.1.0"; sha256="1n2zsl3y4yg1l5kyjfghv6x5hf5520lwz17cvfkvp0m5h6jqfqzg"; depends=[dplyr magrittr]; }; ClusterR = derive2 { name="ClusterR"; version="1.2.1"; sha256="131k4dsh11xx95rhbr9zx20j9y493hiil6gxbgqks8dqp7n895j7"; depends=[ggplot2 gmp gtools Rcpp RcppArmadillo]; }; ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; }; ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; }; @@ -794,11 +800,12 @@ in with self; { CompQuadForm = derive2 { name="CompQuadForm"; version="1.4.3"; sha256="1i30hrqdk64q17vsn918c3q79brchgx2wzh1gbsgbn0dh1ncabq4"; depends=[]; }; CompR = derive2 { name="CompR"; version="1.0"; sha256="1k4q0yanvhdh3ksia7d42lxky19yci5vxhmi6h716g9sxzfsjk6b"; depends=[MASS]; }; CompRandFld = derive2 { name="CompRandFld"; version="1.0.3-6"; sha256="1yr1d97l6yc07jwh30j26gda15pjfcwx2z3w55dh3nr15vds0qcp"; depends=[fields mapproj maps RandomFields scatterplot3d spam]; }; - CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.2.4"; sha256="108x9a83pbk6xiv1fgzwi0fpbvhpiff7aiplrsq2rfv1isjb5xhq"; depends=[data_table expm Matrix]; }; + CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.2.6.2"; sha256="0r8gdr834jqqwiq9h4yz19gcg92rbdd4fr3fwi083vfjml82f0v0"; depends=[data_table expm Matrix]; }; CompareTests = derive2 { name="CompareTests"; version="1.2"; sha256="1z96kh851bpr2szgyjszkpv6m5ma6abz7hrm50fgvfpgxkj7f4yi"; depends=[]; }; ComparisonSurv = derive2 { name="ComparisonSurv"; version="1.0.8"; sha256="1l6c6fwzrmj4sl37rcxhlglwvm1ln4rb138apj1jawnyg2i5si1x"; depends=[muhaz survival survRM2 TSHRC]; }; Compind = derive2 { name="Compind"; version="2.1"; sha256="1cjvpgankifiql67imhxx382q2lz1jq9k0nrwzq560h0xizkak6i"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff np psych smaa spdep]; }; - Compositional = derive2 { name="Compositional"; version="3.6"; sha256="1ngyw7zxvwav65ly6rjqc1zfrgwv3s2a2kyihjf68in6qnqigqxm"; depends=[doParallel emplik foreach MASS mda mixture Rfast Rfast2 sn]; }; + Compositional = derive2 { name="Compositional"; version="3.8"; sha256="103kz32kfzniqbamy1gh7mc9v7q1pjrr03zw1dabzaxfpf9ps4df"; depends=[doParallel emplik foreach MASS mda mixture RANN Rfast Rfast2 sn]; }; + CompoundEvents = derive2 { name="CompoundEvents"; version="0.1.0"; sha256="03shw3016xc41a6by8pnpqs7mmnhs0qmg5aqd4hlfcy3dv2w9wkf"; depends=[]; }; Compounding = derive2 { name="Compounding"; version="1.0.2"; sha256="1xlb3ylwjv70850agir0mx79kcvs43h0n1sm22zcny3509s2r7lf"; depends=[hypergeo]; }; ConConPiWiFun = derive2 { name="ConConPiWiFun"; version="0.4.6"; sha256="1kkc4xp5b6q54b76wk4ga28wl668psbpyivl6bnh3xm21276yx5k"; depends=[Rcpp]; }; ConR = derive2 { name="ConR"; version="1.2.4"; sha256="1d36j1q364pakcm8xrbw323pg6dg9brsf6x3hcj1kahcqls9dcff"; depends=[doParallel fields foreach geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils tibble writexl]; }; @@ -812,7 +819,7 @@ in with self; { CongreveLamsdell2016 = derive2 { name="CongreveLamsdell2016"; version="1.0.2"; sha256="0fs0r3k1hvnp241fa0ymq00868skcigizqr68sp3lsmvzsdyxha9"; depends=[Ternary]; }; Conigrave = derive2 { name="Conigrave"; version="0.4.4"; sha256="02nvk5ya9gr06ai8qnjw0xq6hfbrr91b6lx9gq08dbrnmpbmyvqz"; depends=[dplyr ggplot2 miceadds mitools ppcor stringdist stringr]; }; ConjointChecks = derive2 { name="ConjointChecks"; version="0.0.9"; sha256="097mhiz8zjmmkiiapr3zfx7v35xirg57nqp1swd72dixaa23nhr1"; depends=[]; }; - ConnMatTools = derive2 { name="ConnMatTools"; version="0.3.3"; sha256="0zsn3al3di0fd9hkqljpqqy4zbmh97xr6cdi4fzv80ax81fjfqyk"; depends=[]; }; + ConnMatTools = derive2 { name="ConnMatTools"; version="0.3.5"; sha256="082y4xxnp42xa7db5hnbc9qlvkb50wwb3wzi0my04l55a9s0ril7"; depends=[]; }; ConsRank = derive2 { name="ConsRank"; version="2.1.0"; sha256="0hp6zx3y8vwnpska7bnxpmkpgjlgfw6d7jpc0f7p77j0lqlj0xyc"; depends=[gtools proxy rgl rlist]; }; ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.3.4"; sha256="148zpk5a091kxrn6f73k6piwfwbqdmiyd48qinn6cbfma012n13w"; depends=[caret mclust mixture mnormt mvtnorm]; }; ContourFunctions = derive2 { name="ContourFunctions"; version="0.1.1"; sha256="00p5bdiq8hj95lkr86iwyh50qw0d0d4gs9hhbzcix6lwn8dwqd3s"; depends=[]; }; @@ -821,7 +828,7 @@ in with self; { CoopGame = derive2 { name="CoopGame"; version="0.2.1"; sha256="1c11b5l6r5csa6zw5a6lfqaygzhnp5jfdf0vkrxpl7fb4bbxhm31"; depends=[geometry gtools rcdd rgl]; }; CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="2.0-11"; sha256="0z1ksim2chwg5acbvav0dzsrnzch1qmbvr2k0dhjmn8lr9rdk4m5"; depends=[dplyr geosphere ggplot2 raster rgbif rgdal rgeos rnaturalearth sp tidyselect]; }; CopCTS = derive2 { name="CopCTS"; version="1.0.0"; sha256="1j0bhkjk181y9k69442diswgwax5whmh5vfqydhf3b1r5ll1wkm3"; depends=[copBasic copula msm]; }; - Copula_Markov = derive2 { name="Copula.Markov"; version="2.7"; sha256="0bgw8493kv0skjdnwyml9m2ilgz0ac4k9nps9kilphw9l9f1if02"; depends=[]; }; + Copula_Markov = derive2 { name="Copula.Markov"; version="2.8"; sha256="0wyb80jj9zgh7kn0nah7dljps72083c92hpds94dw4ccmw6cfwf6"; depends=[]; }; Copula_Markov_survival = derive2 { name="Copula.Markov.survival"; version="0.1.0"; sha256="1r9m96r0mqqjlawhlb9d8d1hf2k2bkal2fmw6g0zabdjb19c75y7"; depends=[survival]; }; Copula_surv = derive2 { name="Copula.surv"; version="1.0"; sha256="1cq12vmsvrxd6anpv6b5jig7x1lf6pj589353h2ba9k0fhkpk51y"; depends=[]; }; CopulaCenR = derive2 { name="CopulaCenR"; version="1.1.2"; sha256="1ksxqgb91vww5q4njidchxwia64g5229dvpxhqhfp8w6hvmib1k1"; depends=[caret copula corpcor flexsurv icenReg magrittr plotly pracma survival]; }; @@ -830,6 +837,7 @@ in with self; { CopyDetect = derive2 { name="CopyDetect"; version="1.3"; sha256="1g3bwd805h62x93xvvn67acf9v6vn7s7ghxpvjhwcfdfj7fwzh6l"; depends=[mirt]; }; CorBin = derive2 { name="CorBin"; version="0.3.3"; sha256="0jf3d0mbr0vmcqmk5p4rcvc3nc4dn6cqcj8fcqyf32y9vwxd2wii"; depends=[]; }; CorDiff = derive2 { name="CorDiff"; version="1.0"; sha256="12rgfhygrdq1ign4ybr8g171wxic8zbp83n1xdsnqpj910k5jdr5"; depends=[mcc]; }; + CorReg = derive2 { name="CorReg"; version="1.2.17"; sha256="06r8a7swvbafkl7ynvhhwbvm8jgqi54q70fk5jv19plff2j4gxmf"; depends=[corrplot elasticnet glmnet lars MASS Matrix mclust mvtnorm Rcpp RcppEigen rpart]; }; Corbi = derive2 { name="Corbi"; version="0.5-0"; sha256="05jr0y0qjv2l5ikx8cj10nl16z5yvcjbzdz5gk7lp6kpnmgq3sbw"; depends=[Matrix]; }; CoreGx = derive2 { name="CoreGx"; version="0.1.1"; sha256="160lf1hg4a8cxgbsiny8g0yhyp1x1c2pdlys6rc9smllhsmzd9yw"; depends=[Biobase lsa piano rlang]; }; CornerstoneR = derive2 { name="CornerstoneR"; version="1.1.1"; sha256="017j7s3m97sxahgnvk9sm7rfx81cjp1xzsmw7b1aqi7301zjrqa7"; depends=[checkmate data_table ranger vcd]; }; @@ -840,7 +848,7 @@ in with self; { CorrectOverloadedPeaks = derive2 { name="CorrectOverloadedPeaks"; version="1.2.17"; sha256="1g7irjbhwnbhk74y3qxcjlrsn2yz8q6wn7ih16wq669nswryxhxk"; depends=[bitops digest XML]; }; CorrectedFDR = derive2 { name="CorrectedFDR"; version="1.0"; sha256="15047cfjniljzhznkbzq3hyq221y9k7fa04f69zm0k0sxr627gxg"; depends=[]; }; CosW = derive2 { name="CosW"; version="0.1"; sha256="12l4w8b5jnr8773hxk7khrdn705x6bdbw7s8z8w95bfbbi12dj6v"; depends=[fdrtool pracma]; }; - Counterfactual = derive2 { name="Counterfactual"; version="1.1"; sha256="0mz0h5zsmca8fww7nq08m9cld2zbaydn8qad5f2g6vxn382842p9"; depends=[doParallel doRNG foreach Hmisc quantreg survival]; }; + Counterfactual = derive2 { name="Counterfactual"; version="1.2"; sha256="1spryxvnkdz728rl4nb7zlqhynnh0b4m7lnhq4i1n13gfsz1m5j4"; depends=[doParallel doRNG foreach Hmisc quantreg survival]; }; Countr = derive2 { name="Countr"; version="3.5.4"; sha256="10fzmqncbnr47x35xqpsmwzadv9j6r2svisrv8vfpp27mlvp9qwr"; depends=[boot car dplyr flexsurv Formula lattice lmtest MASS Matrix numDeriv optimx pscl RColorBrewer Rcpp RcppArmadillo Rdpack standardize VGAM xtable]; }; CountsEPPM = derive2 { name="CountsEPPM"; version="3.0"; sha256="0iw7sfrb4yyaagwm1f4q9av5zvzia1mp2ns287ppsw3k248lz0kb"; depends=[expm Formula lmtest numDeriv]; }; CovCombR = derive2 { name="CovCombR"; version="1.0"; sha256="07yd0zbvc9db2jw6xigfhxnbkxwb3gxlmywadz7fs3rva2if2ffx"; depends=[CholWishart Matrix nlme]; }; @@ -873,20 +881,19 @@ in with self; { CytobankBridgeR = derive2 { name="CytobankBridgeR"; version="1.0.0"; sha256="0m8gxbm3p9gvdszymqx10n5rzb406r4f70a0in798c56mp2rcsl4"; depends=[CytobankAPI]; }; D3GB = derive2 { name="D3GB"; version="1.1"; sha256="1r4hxx2qdws7c7hsnswzfh6az8mn720sk8nygilljl2ghnwpq7pa"; depends=[DBI RSQLite]; }; D3partitionR = derive2 { name="D3partitionR"; version="0.5.0"; sha256="10067rdgbpjzgw2wiq75kdd0gd7bl41hp16sxc0k2p72ybqfpw03"; depends=[data_table functional htmlwidgets magrittr RColorBrewer titanic]; }; + DAAG = derive2 { name="DAAG"; version="1.24"; sha256="09fxd21p7v9mpy9s876n1jyc3l7w7s3vs5iglc3xphqbffgzfnvs"; depends=[lattice latticeExtra]; }; DAAGbio = derive2 { name="DAAGbio"; version="0.63-3"; sha256="0n82d9nsvpl6cwp95by8ff9fmdafs2fdi603dlik5890adaw42x4"; depends=[limma]; }; DAC = derive2 { name="DAC"; version="0.1.1"; sha256="0abnl70k4c98n29qi64sfd5nch10abw9fknhf2aksyi0qadsiyjq"; depends=[blavaan flexmix sfsmisc truncnorm]; }; DACF = derive2 { name="DACF"; version="1.0.0"; sha256="0hv7c9lk6ivj4iz953yn11iy5p611q4si4ghn9d5a9i229s5hig8"; depends=[]; }; - DAFOT = derive2 { name="DAFOT"; version="0.0.1"; sha256="18r5fhb6g0s1viifkkicplzab4aand2lxiwph86w80q80bzpjlpg"; depends=[ape gtools tibble tidytree]; }; - DAIME = derive2 { name="DAIME"; version="2.1.1"; sha256="0skj878ri6h1q16nsln58ssanh3nhxfq4124fhcmfc60h1jhv336"; depends=[]; }; + DAIME = derive2 { name="DAIME"; version="2.1.3"; sha256="099pbzgryz9lxhcqlrywcv8zl5af4ir5dyyqvgc16xi5bddxk7ld"; depends=[]; }; DAISIE = derive2 { name="DAISIE"; version="1.4"; sha256="16653wwz20lhf3bpzflpj5d1h7j3cqyfaqk5gn24aifga2jc0wbb"; depends=[DDD deSolve Matrix subplex tensor]; }; DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; }; - DALEX = derive2 { name="DALEX"; version="0.4.9"; sha256="1zviaf7530v8w996lbma0vplabrapgwldi7h70pr0439sxaqd421"; depends=[ggplot2]; }; + DALEX = derive2 { name="DALEX"; version="1.0.1"; sha256="1jbyn57vn6d281a5y15h5d8ljin8cdb9lr7lbgggc950blyfv4g0"; depends=[ggplot2]; }; DALEXtra = derive2 { name="DALEXtra"; version="0.2.0"; sha256="1brjc9lybc1sfyk0n6bd44rpapgvi3p60wxw5qaajfcxrxk1286b"; depends=[DALEX ggdendro ggplot2 glmnet gridExtra reticulate]; }; DALY = derive2 { name="DALY"; version="1.5.0"; sha256="1v7ld01xcn5jiygl1c3xhd5h71ip90lks87fs9gmpnivp8jz5cr5"; depends=[]; }; DAMOCLES = derive2 { name="DAMOCLES"; version="2.2"; sha256="1rmm36k5w6y8pkb1vzkxnizx3my94kgai8h3x83cxr6mlbgn9lb8"; depends=[ape caper DAISIE DDD deSolve expm Hmisc Matrix matrixStats picante]; }; - DAMisc = derive2 { name="DAMisc"; version="1.5"; sha256="1m418lmzy4sv5hj90j4r4j1bb2q43hxnmpd0mp16010fyr0asbcy"; depends=[AICcmodavg boot car coda effects fANCOVA games gdata lattice latticeExtra MASS nnet optiscale pscl rstan VGAM xtable]; }; + DAMisc = derive2 { name="DAMisc"; version="1.5.1"; sha256="1miggxj6jz9l9jirywkdf6rnxxv7hd6vskv3f2bmp9qh7q7v5f0y"; depends=[AICcmodavg boot car coda effects fANCOVA games gdata lattice latticeExtra MASS nnet optiscale pscl rstan VGAM xtable]; }; DAP = derive2 { name="DAP"; version="1.0"; sha256="0zzb05yxfaqp6qnr979q20rqy8sl5l825mxs0x9366qr7mz5k5ws"; depends=[MASS]; }; - DATforDCEMRI = derive2 { name="DATforDCEMRI"; version="0.55"; sha256="0v26a1gi8l21ga5nqcnyfaa7gc8zxq6wk95b96ajgpdybb0l9s53"; depends=[akima lattice locfit matlab R_methodsS3 R_oo xtable]; }; DBEST = derive2 { name="DBEST"; version="1.8"; sha256="1a598g02hpfgv572gchllqkppynnsp4lx764jg0g66w3b66k0kdy"; depends=[zoo]; }; DBGSA = derive2 { name="DBGSA"; version="1.2"; sha256="04zqh9y3nqcdzs5jn8aaq5idy9zl450ikvl788xs860wlg692qv2"; depends=[fdrtool]; }; DBHC = derive2 { name="DBHC"; version="0.0.2"; sha256="08sl6gv1dw2kpk1zylvyqqga6xvhzhpp5zxa9ql1hyzc2i43jivq"; depends=[ggplot2 reshape2 seqHMM TraMineR]; }; @@ -897,21 +904,23 @@ in with self; { DCA = derive2 { name="DCA"; version="2.0"; sha256="1acy33vyf814kr0aj6kdvi9f1qzgynwwzv57ll01gd0iqq36374f"; depends=[coin elasticnet GPArotation locfdr modeest mvtnorm PMA]; }; DCCA = derive2 { name="DCCA"; version="0.1.1"; sha256="06xdx79r7dr14dlk5vgcyd8ar4sc72imlyk66bnia1kvlynvdy69"; depends=[checkmate]; }; DCD = derive2 { name="DCD"; version="0.1.0"; sha256="0p6vk8fdvpcvb1bb5fwy3h1v8y3djlvcm5jl5lnx30ngqj6d7rcj"; depends=[data_table doParallel foreach ggplot2 igraph lattice lsa Matrix plyr qlcMatrix Rdpack ROCR WGCNA]; }; + DCEM = derive2 { name="DCEM"; version="2.0.1"; sha256="1ma6f7233jm0rzm12f406scgrj4b6xnv39aaplpgcvpx160nv3j1"; depends=[MASS matrixcalc mvtnorm Rcpp]; }; DCG = derive2 { name="DCG"; version="0.9.3"; sha256="08718x6v3g7kpfv0gpgm19cn3d3ynj7yagzs0jic1j5rwvn04pfb"; depends=[]; }; DCGL = derive2 { name="DCGL"; version="2.1.2"; sha256="1dhkdvdglpsr0fzrfrrr6q76jhwxgrcjsiqn56s082y7v366xvs4"; depends=[igraph limma]; }; DCL = derive2 { name="DCL"; version="0.1.0"; sha256="1ls3x3v0wmddfy7ii7509cglb28l1ix1zaicdc6mhwin0rpp2rx3"; depends=[lattice latticeExtra]; }; DCM = derive2 { name="DCM"; version="0.1.1"; sha256="191gwfv30hdr789jmdrimcc7aqisz635anydsw2v4s28a3zjbipw"; depends=[gWidgets pander readxl]; }; DCODE = derive2 { name="DCODE"; version="1.0"; sha256="19dwms88q0ylxd92l3ivig8p8jjyhk8mhgz0l36m9pcq11gyjc0n"; depends=[seqinr]; }; - DCchoice = derive2 { name="DCchoice"; version="0.0.15"; sha256="1qdqn45ipq0806r25ri4aygzq48k8j5k8rlhi1cafym421yq6bfg"; depends=[Formula interval MASS]; }; + DCPO = derive2 { name="DCPO"; version="0.5.0"; sha256="03j0aibh70ghh4nkna1iqsbylih3nc85zv9cb91mc4fp9ygcicag"; depends=[beepr BH dplyr forcats janitor purrr Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; + DCchoice = derive2 { name="DCchoice"; version="0.0.16"; sha256="0wwhdpljg1k70kydhh89lk6c461a9vjw6p2ijzhvgkv2pl5rxaag"; depends=[Formula interval MASS]; }; DChaos = derive2 { name="DChaos"; version="0.1-3"; sha256="12qi8m2rvd5r8clmi44hiwpnr6zf1sjw35wvbvm4nz3431xwf4ng"; depends=[entropy NeuralNetTools nnet outliers pracma sandwich xts zoo]; }; DCluster = derive2 { name="DCluster"; version="0.2-7"; sha256="008nyry64s5g80narcc58273v0jhqzfgwynka6mh7jgi7qsqnxjd"; depends=[boot MASS spdep]; }; - DClusterm = derive2 { name="DClusterm"; version="1.0-0"; sha256="19ifnj7y3zjp15hd6mafjjqbqqyff17zd0ivnl8bd843nalgfxbb"; depends=[DCluster gridExtra latticeExtra lme4 pscl RColorBrewer sp spacetime xts]; }; - DDD = derive2 { name="DDD"; version="4.1"; sha256="09aif9agypw765h148615b6dcjhzw1bvgrzz9dka6n3vk4r1lj5d"; depends=[ape deSolve expm Matrix phytools SparseM subplex]; }; + DClusterm = derive2 { name="DClusterm"; version="1.0-1"; sha256="04i9fyph2k3ffds0nv49371p8lw6dkzcf27pc98f99x0l6c8k5iq"; depends=[DCluster lme4 sp spacetime xts]; }; + DDD = derive2 { name="DDD"; version="4.2"; sha256="0mar15dlbf6arh720lzm1d1zgiz87f0k4r8g6jy4620s9d87m3qp"; depends=[ape deSolve expm Matrix phytools SparseM subplex]; }; DDHFm = derive2 { name="DDHFm"; version="1.1.2"; sha256="0lgh6kcfas06p2yy7zy21r05k5521xbj5af3wwwssp5li1cia35g"; depends=[lokern wavethresh]; }; DDIwR = derive2 { name="DDIwR"; version="0.4"; sha256="0z994anrw746iy83503bah2n39rd7qvx4spxn4qwhxhxbjp4gkfw"; depends=[admisc haven readr tibble xml2]; }; DDM = derive2 { name="DDM"; version="1.0-0"; sha256="19g06qk3lzasj294x9wfij729mlq6ryvjqkn3rgl5xp1w0gx9wi2"; depends=[]; }; DDPGPSurv = derive2 { name="DDPGPSurv"; version="1.0"; sha256="1d271yv621jmwd4dmdnhpwrk95gbpw7g6r2v05lc3d6wzlzpd78c"; depends=[MASS mc2d mvnfast Rcpp RcppArmadillo survival]; }; - DDPNA = derive2 { name="DDPNA"; version="0.2.1"; sha256="0854zs6gay78dq0ivpmkrhg387llk0mbfjz8nkvhnkss0mh6bpmk"; depends=[ggalt ggplot2 Hmisc igraph MEGENA plyr scales VennDiagram]; }; + DDPNA = derive2 { name="DDPNA"; version="0.2.3"; sha256="0ndwrp7pxmqy2j8lrcf82pk58hda0g6b44xnjhg5wy18vzym52g0"; depends=[ggalt ggplot2 Hmisc igraph MEGENA plyr scales VennDiagram]; }; DDRTree = derive2 { name="DDRTree"; version="0.1.5"; sha256="16s5fjw7kwlxhrkzdny62sx32fvmg3rxjc3wrh6krd31jh1fqlfk"; depends=[BH irlba Rcpp RcppEigen]; }; DDoutlier = derive2 { name="DDoutlier"; version="0.1.0"; sha256="1az5zq0l3kj959572mlpc4zl73f16iag0yrs217fa9m8xpd3c2sd"; depends=[dbscan pracma proxy]; }; DECIDE = derive2 { name="DECIDE"; version="1.2"; sha256="18kn2pm9r0ims2k1jfsfzh258wwxz0xg86rsbwgq6szh0azlq3qy"; depends=[]; }; @@ -923,15 +932,15 @@ in with self; { DESnowball = derive2 { name="DESnowball"; version="1.0"; sha256="012kdnxmzap6afc3ffkcvk1mazlkp286av6g9fwz2wcbf5mh9n1m"; depends=[clue cluster combinat MASS]; }; DET = derive2 { name="DET"; version="2.0.1"; sha256="1jadxhq2jjjvmkz4bmakb7yzlnf080fpdkdi39czkm489bvjxgd5"; depends=[doParallel pROC]; }; DEVis = derive2 { name="DEVis"; version="1.0.1"; sha256="0fb8q72gm9h52v6fc12jcvk9k59qrns74yqjvj73nch29gkr16hp"; depends=[DESeq2 ggdendro ggplot2 ggsci ggthemes gridExtra MASS pheatmap plyr PoiClaClu RColorBrewer reshape2 SummarizedExperiment]; }; - DEoptim = derive2 { name="DEoptim"; version="2.2-4"; sha256="10nlsvms5pf0wmn4z1lj6vnmpwr10q8nhdy5xy9rn7hd1627fm0a"; depends=[]; }; + DEoptim = derive2 { name="DEoptim"; version="2.2-5"; sha256="0nlm2gdvd33yrwambmlrgj76inxz2a65ya7727l98fd4skfdw4mf"; depends=[]; }; DEoptimR = derive2 { name="DEoptimR"; version="1.0-8"; sha256="1vz546hyjyhly70z62h5n3mn62b8llhhmim8ffp9y6jnnb0i2sc4"; depends=[]; }; - DEploid = derive2 { name="DEploid"; version="0.5.2"; sha256="0xjczfql6jl4jxxwvdn3gmwj8bawhj5w6hdamrb0yjdjlhdwb11y"; depends=[htmlwidgets magrittr plotly Rcpp rmarkdown scales]; }; + DFA_CANCOR = derive2 { name="DFA.CANCOR"; version="0.1.6"; sha256="0pyql8xms08qn8kzf1h984ik1pbyy8z1wa1lf588pb6clwmd2mk8"; depends=[MASS MVN]; }; DFIT = derive2 { name="DFIT"; version="1.0-3"; sha256="1h0wvcplb7j7dqz9hkaw30x92ngxzkdvkwpg0142hrqb201zfrac"; depends=[ggplot2 mvtnorm simex]; }; DGCA = derive2 { name="DGCA"; version="1.0.2"; sha256="0k2a24ycagyxdx54dh9w8km25xhmmmhyyl26g76z4g5gqvcw092k"; depends=[matrixStats WGCNA]; }; - DGLMExtPois = derive2 { name="DGLMExtPois"; version="0.1.0"; sha256="1c6lys605sggni40792d1xq8ll5nbdc75r92c87grx7zh74sz98m"; depends=[compoisson COMPoissonReg nloptr progress]; }; + DGLMExtPois = derive2 { name="DGLMExtPois"; version="0.1.1"; sha256="1qzpxv62ng01r4wl5i62v3a1grd7d5naj1ra4bck5z4wwc54w2f5"; depends=[COMPoissonReg nloptr progress]; }; DGM = derive2 { name="DGM"; version="1.7.2"; sha256="0z0f8bazzsahvjkpfif50db700mqb7arcglwsfxcar9qdy082vsn"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; DGVM3D = derive2 { name="DGVM3D"; version="1.0.0"; sha256="17cxv8rm7kmxms7v7hzbwbdwa3xl1hwgiljf97ppwswglqyik9iv"; depends=[rgl]; }; - DHARMa = derive2 { name="DHARMa"; version="0.2.6"; sha256="0mv95409lr9psh8ia9llpx8a6861iakrfnw2h96gpi2r9scpr8fj"; depends=[ape doParallel foreach gap glmmTMB lme4 lmtest MASS mgcv qrnn sfsmisc spaMM]; }; + DHARMa = derive2 { name="DHARMa"; version="0.2.7"; sha256="13gs6v5z7lwjas7ln6nnlw125scmk517ma0y3jiwj1rn4vnhy41m"; depends=[ape doParallel foreach gap glmmTMB lme4 lmtest MASS mgcv qrnn sfsmisc spaMM]; }; DHBins = derive2 { name="DHBins"; version="1.1"; sha256="1g69acac7pxw8x0d9czyds7xljhbv9d686c99a3y8b4vh7dnx62s"; depends=[ggplot2]; }; DHS_rates = derive2 { name="DHS.rates"; version="0.7.0"; sha256="11rzwwx6vvr66nfklqh6j86k3d0cdccg6l99azwqif0cmj81rdw5"; depends=[crayon haven matrixStats reshape survey]; }; DIFboost = derive2 { name="DIFboost"; version="0.2"; sha256="0wyjk870n18lq0dwhm9ndsh5vv0d8wkrbcky68w454vzrrw1q9h8"; depends=[mboost penalized stabs]; }; @@ -944,14 +953,14 @@ in with self; { DIconvex = derive2 { name="DIconvex"; version="1.0.0"; sha256="0bnrq9nmryshir6ll43nz20aaqmmw0zjvfml72cpwbvrma8a3qmz"; depends=[lpSolveAPI]; }; DJL = derive2 { name="DJL"; version="3.2"; sha256="0vagpvmnbpnlxa1gj3y3gp0npf8hvpn8lyjrcggdn58rbcm2z3q9"; depends=[car lpSolveAPI]; }; DLASSO = derive2 { name="DLASSO"; version="2.0.2"; sha256="0xdygf6h89d9z4kqb46iqfxgdzq9dmkrxf9ypw78l4d8n9xx2gaa"; depends=[MASS]; }; - DLMtool = derive2 { name="DLMtool"; version="5.4.1"; sha256="0sfb1kx14qq4nxskgavbvsh78v4g5k9dmmp2vv8g2kfi73izwr83"; depends=[abind boot broom crayon devtools dplyr DT fmsb ggplot2 ggrepel gridExtra kableExtra knitr MASS mvtnorm openxlsx purrr Rcpp RcppArmadillo readxl rfishbase rmarkdown shiny snowfall tidyr]; }; - DMMF = derive2 { name="DMMF"; version="0.5.0.2"; sha256="02sk1ykispkjdclsi5xp1m4vmf8mhcqm4q2z73xanvax1kqfb3v3"; depends=[raster rgdal sp]; }; + DLMtool = derive2 { name="DLMtool"; version="5.4.2"; sha256="0ja0729wsjwannjffz0mv0m6f7sq6sy14c1pbpbjm1547d9v01bn"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo snowfall]; }; + DMMF = derive2 { name="DMMF"; version="0.5.1.2"; sha256="0p82cfp0561j4ki20rznx46z7vqdxh128a0m0zj8d2wp3csn1aag"; depends=[raster rgdal sp]; }; DMRMark = derive2 { name="DMRMark"; version="1.1.1"; sha256="15wr6j0v9kvbv8y6flkp4svfqy059ziv89nxv91vp0pjmavhpdlz"; depends=[ellipse MCMCpack mvtnorm]; }; DMRnet = derive2 { name="DMRnet"; version="0.2.0"; sha256="1rbba8w4li240gw5z675d7skm72rh0zxzp4rhsn6ivj72jya7jw4"; depends=[glmnet grpreg]; }; DMwR = derive2 { name="DMwR"; version="0.4.1"; sha256="1qrykl9zdvgm4c801iix5rxmhk9vbwnrq9cnc58ms5jf34hnmbcf"; depends=[abind class lattice quantmod ROCR rpart xts zoo]; }; DMwR2 = derive2 { name="DMwR2"; version="0.0.2"; sha256="1vzfbz2k05j8r2hpig3d2grb99rnnh2s1sviii3prcyqicxfh0i9"; depends=[class DBI dplyr quantmod readr rpart xts zoo]; }; DNAseqtest = derive2 { name="DNAseqtest"; version="1.0"; sha256="1mpmf40vrpw8m75rlqchsnyrz12pgg5bkz7wfca5yy5sbbiwk5pf"; depends=[]; }; - DNAtools = derive2 { name="DNAtools"; version="0.1-22"; sha256="1kkqbzwbivd78lpphsn9xqdxqc46ng6f86nqns18gq0s2g8gvys1"; depends=[multicool Rcpp Rsolnp]; }; + DNAtools = derive2 { name="DNAtools"; version="0.2-2"; sha256="1257gwjlqg4viw9n8g6cvv9anx5filh9d4zmjdm8zqvh7kchm8yf"; depends=[multicool Rcpp RcppParallel RcppProgress Rsolnp]; }; DNLC = derive2 { name="DNLC"; version="1.0.0"; sha256="05410xgpfjsydjmnzry454qcjpws9vhh252q2xq7l0scdj87ly00"; depends=[caTools fdrtool GOstats igraph locfdr mvtnorm spdep]; }; DNMF = derive2 { name="DNMF"; version="1.3"; sha256="09yp6x6vd44ahklcag96fpjgyphyn45rkqkbwr1n36a2d8vxk9nc"; depends=[doParallel foreach gplots Matrix]; }; DNetFinder = derive2 { name="DNetFinder"; version="1.0"; sha256="0q56c2389qaq3wsqpj8s95ncm0xmbl1slr0jmpixb48hhgk0l0ji"; depends=[flare]; }; @@ -971,7 +980,7 @@ in with self; { DREGAR = derive2 { name="DREGAR"; version="0.1.3.0"; sha256="15cplshs85r0z659mc7xmj5db7vc95wxs01c34isc22p8z0a287i"; depends=[msgps]; }; DRHotNet = derive2 { name="DRHotNet"; version="1.1"; sha256="040g9h2a2hmnd20y41xnms01iam68f6xhp2x0ckarmx961995bhg"; depends=[maptools PBSmapping raster sp spatstat spdep]; }; DRIP = derive2 { name="DRIP"; version="1.4"; sha256="1rds1161h19waqhiq08hqk5zcn48afccaggmb42xr1zyk31irpi6"; depends=[readbitmap]; }; - DRR = derive2 { name="DRR"; version="0.0.3"; sha256="1yd1fvllfkcrwg9v322n4wkk4q4q84nvy58y4vac9pdr3yf3i4vl"; depends=[CVST kernlab Matrix]; }; + DRR = derive2 { name="DRR"; version="0.0.4"; sha256="1y70si1gig4l7jx5jiqsqliyywfsvimkx53x3zh1lc3yj2j6bqwk"; depends=[CVST kernlab Matrix]; }; DRaWR = derive2 { name="DRaWR"; version="1.0.1"; sha256="1pfdczwzd236c64yw94bgbk0hbl4dhlgjfjwkljmqgqrzsddvgqh"; depends=[Matrix ROCR]; }; DRomics = derive2 { name="DRomics"; version="2.0-1"; sha256="0lfjk202fgvxjljjpakbmdqc41hbpgl39lym215hlqksfpi0jq7a"; depends=[DESeq2 ggplot2 limma]; }; DSAIDE = derive2 { name="DSAIDE"; version="0.8.3"; sha256="0n1ffv48202pnnsdcd3zpgpviy8613fcgx5c796whjffrc4v8m31"; depends=[adaptivetau deSolve dplyr ggplot2 gridExtra lhs nloptr plotly shiny XML]; }; @@ -980,15 +989,15 @@ in with self; { DSL = derive2 { name="DSL"; version="0.1-7"; sha256="05wj3zypr2kqfbka930qnwnk2r43pqi13pbs5n6lm8vdq4zjblw4"; depends=[]; }; DSpat = derive2 { name="DSpat"; version="0.1.6"; sha256="1v6dahrp8q7fx0yrwgh6lk3ll2l8lzy146r28vkhz08ab8hiw431"; depends=[mgcv RandomFields rgeos sp spatstat]; }; DSpoty = derive2 { name="DSpoty"; version="0.1.0"; sha256="18z8gk3zj7k2szxg9579qy5klrqjw6zsk5x9jmwrv4qhb98fyji6"; depends=[dplyr httr purrr stringr]; }; - DSsim = derive2 { name="DSsim"; version="1.1.4"; sha256="0cspyd6msh8aci3w1fv234ca2bwpi6ylkbl45d4k0v3wzzfj20hk"; depends=[fields mgcv mrds rgeos shapefiles sp splancs]; }; + DSsim = derive2 { name="DSsim"; version="1.1.5"; sha256="0dr8dc91m7s5c198k9cb26a09f14wb8ihr46c0mr9cg33l2wf3nv"; depends=[fields mgcv mrds rgeos shapefiles sp splancs]; }; DStree = derive2 { name="DStree"; version="1.0"; sha256="14wba25ylmsyrndh007kl377dv4r34wr1555yxl6kyxrs4yg3jir"; depends=[Ecdat pec Rcpp rpart rpart_plot survival]; }; DSviaDRM = derive2 { name="DSviaDRM"; version="1.0"; sha256="1hj2pgnldrpgapwwz1kf4k6mvyzwdvb1i6czd7sbimsx5hafwps8"; depends=[igraph ppcor]; }; - DT = derive2 { name="DT"; version="0.11"; sha256="09k9s07aah1apc308sj1abvr27mky6fkpl9j6lxl2x55n4immvkg"; depends=[crosstalk htmltools htmlwidgets jsonlite magrittr promises]; }; + DT = derive2 { name="DT"; version="0.12"; sha256="0089288ma1cj9nf4jscmpbagyqlg4r90mw8bwl4zv1d4hjl0d693"; depends=[crosstalk htmltools htmlwidgets jsonlite magrittr promises]; }; DTAT = derive2 { name="DTAT"; version="0.3-3"; sha256="184b8qkwqlygdqzad2x2qf4hdrpsr7yffmf21jrz5yf946y621wl"; depends=[data_table dplyr Hmisc jsonlite km_ci pomp r2d3 shiny survival]; }; DTAXG = derive2 { name="DTAXG"; version="0.1.0"; sha256="1jxa0ix0z35i0xdnjl698j8iqjmp6nz8ckah9bap5ay9rkq0xd7f"; depends=[]; }; DTComPair = derive2 { name="DTComPair"; version="1.0.3"; sha256="1af2293ckkpz0gjcibgzzvz37852cav4wa4girpc87yn3p4ajlri"; depends=[gee PropCIs]; }; - DTDA = derive2 { name="DTDA"; version="2.1-1"; sha256="0hi2qjcwd6zrzx87mdn1kns5f2h6jh7sz9jpgbi0p0i80xg8jnn3"; depends=[]; }; - DTDA_cif = derive2 { name="DTDA.cif"; version="1.0.1"; sha256="1ams5annm0296y6i5ii54cf95i0739269b4p97rib6nniynpwwxk"; depends=[doParallel foreach Rcpp]; }; + DTDA = derive2 { name="DTDA"; version="2.1-2"; sha256="1nc4j6pzbk5g967k9vh06v8gfr88h611fw6zbvrp2iy6z22arpgf"; depends=[]; }; + DTDA_cif = derive2 { name="DTDA.cif"; version="1.0.2"; sha256="12vkhqxdhir06s35kr76dwns9m02wyicz3mv4r56fqglsfyw77xr"; depends=[doParallel foreach Rcpp]; }; DTDA_ni = derive2 { name="DTDA.ni"; version="1.0"; sha256="0c45cz4y629bc0jnf3m35ywqkrnjcdqbssbb6m10j8b4gszdi35i"; depends=[]; }; DTK = derive2 { name="DTK"; version="3.5"; sha256="0nxcvx25by2nfi47samzpfrd65qpgvcgd5hnq9psx83gv502g55l"; depends=[]; }; DTMCPack = derive2 { name="DTMCPack"; version="0.1-2"; sha256="0bibas5cf06qq834x9q2l2fyh6q9wrg07k8cn6almcyirzax6811"; depends=[]; }; @@ -1006,7 +1015,7 @@ in with self; { DamiaNN = derive2 { name="DamiaNN"; version="1.0.0"; sha256="09viy1lilz0b29s3myky03981bfnhxjxxgfhdah33cn5x682rbp4"; depends=[caret testthat]; }; DandEFA = derive2 { name="DandEFA"; version="1.6"; sha256="1ir1z76c8742vqdlwv35l4rhr0x7lhghz24g35zn7b30671lypf8"; depends=[gplots polycor]; }; Dark = derive2 { name="Dark"; version="0.9.8"; sha256="1f01aq4g50f07005c8k91cfy9hvl3fmb4yl2924d7512m3884xlv"; depends=[]; }; - DarkDiv = derive2 { name="DarkDiv"; version="0.1.0"; sha256="04yx2j3ywskyi5dq1lsnbkfjg2bhybpmckxlr76qi88v90q3nq6m"; depends=[vegan]; }; + DarkDiv = derive2 { name="DarkDiv"; version="0.2.0"; sha256="0ygd79bgyajm1p58l0anprglcgi0gsflnc4ml61zq91pf6nhczlf"; depends=[vegan]; }; Dasst = derive2 { name="Dasst"; version="0.3.3"; sha256="0nrcvcfzr2y1jc984rpi3fmggns65sphc6nqr9l91h5qvpdcw7cl"; depends=[]; }; DatAssim = derive2 { name="DatAssim"; version="1.0"; sha256="120gazyyxda9faydv2lyqgvflhqi2fhih1szq0sy5v1gh4xb0hhy"; depends=[Rcpp RcppArmadillo]; }; Data2LD = derive2 { name="Data2LD"; version="2.0.0"; sha256="145lvrscq3iyc7cy6xr0vrm5qa2323m3c3g2ikdhj18rhzx4r46k"; depends=[deSolve fda Matrix]; }; @@ -1014,20 +1023,19 @@ in with self; { DataCombine = derive2 { name="DataCombine"; version="0.2.21"; sha256="0iwb4726bk0cjhay694dp43b1553yyk9lpxbncs85kz229b26arm"; depends=[data_table dplyr]; }; DataEntry = derive2 { name="DataEntry"; version="0.9-3"; sha256="0gfsg7wfwy88x7y1dwpgwi6fkizjnhrzj0a5ij70y4a4sjmyiy55"; depends=[digest gWidgets2 gWidgets2RGtk2 RGtk2]; }; DataExplorer = derive2 { name="DataExplorer"; version="0.8.1"; sha256="0724ngcw2b1i2cf8jbak61saqk71f06wszvx7nhba4n0z8l503cz"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; }; - DataGraph = derive2 { name="DataGraph"; version="1.0.1"; sha256="0rvysvkcs926jzhp7iz9d5np0pa31y825ajn9yyzhbdfk5dg2wry"; depends=[Rcpp]; }; + DataGraph = derive2 { name="DataGraph"; version="1.2.1"; sha256="164wbh3by8qf0p84l5v7vwrzf0f2s305fwmrl01khcll8pk34xlm"; depends=[Rcpp]; }; DataLoader = derive2 { name="DataLoader"; version="1.3"; sha256="18mih6mb95v5xjvmqwby2mma74fcxwyqdm5w8j3bhi4iwgfn6d7v"; depends=[plyr rChoiceDialogs readxl xlsx]; }; DataPackageR = derive2 { name="DataPackageR"; version="0.15.7"; sha256="11bra0kgmvag4mp6hpljd8m3r1306cbncmz3x71iybkahimws813"; depends=[assertthat crayon desc devtools digest futile_logger knitr purrr rmarkdown roxygen2 rprojroot stringr usethis yaml]; }; DataSpaceR = derive2 { name="DataSpaceR"; version="0.7.3"; sha256="0jg77zq12fvwnzfdk83y6wi4547g9r5zlvhjmjj1bp0xp7spcbyk"; depends=[assertthat curl data_table digest httr jsonlite R6 Rlabkey]; }; - DataVisualizations = derive2 { name="DataVisualizations"; version="1.1.9"; sha256="13yrjs37ap8rmx842zp529brfr12rr4d77f2pqlj5wfppngxzv31"; depends=[ggplot2 Rcpp RcppArmadillo sp]; }; + DataVisualizations = derive2 { name="DataVisualizations"; version="1.1.11"; sha256="160jrajyr6vhj05233602b2k5lh3l1znd73hn4vxak7qjh2rajkm"; depends=[ggplot2 Rcpp RcppArmadillo sp]; }; DataViz = derive2 { name="DataViz"; version="0.2.8"; sha256="1dr5nvdzc63x9ymlysvv5i8b7zcffq13pa39q0ychdwr1s3x7vzw"; depends=[Rcpp tibble]; }; DatabaseConnector = derive2 { name="DatabaseConnector"; version="2.4.2"; sha256="1q83lw8zxzq2d1gdcsbr4mqjz6gz0c3m2vi4l8x4mj9kf497dvc3"; depends=[bit DatabaseConnectorJars DBI ff ffbase rJava SqlRender urltools]; }; DatabaseConnectorJars = derive2 { name="DatabaseConnectorJars"; version="1.1.0"; sha256="18m6ynj30r5xdy51b3s39h0jcz1k2wgka888skr6ds2233lhqk2w"; depends=[rJava]; }; - DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="1.1.2"; sha256="02bg4gagd09gqdnlf5bz97d8pygfl7rl02r533y671dz2qqffpa9"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; }; + DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="1.1.3"; sha256="1qjlczpxadvzjn4gl2q7rnmpgygsh8ylk8cfvmynx8p675g657cz"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; }; Davies = derive2 { name="Davies"; version="1.1-9"; sha256="19n2szki2dc8z01zh5a7bq4scgisnpd2qqbiimgrswjrykgh2fpm"; depends=[]; }; DeLorean = derive2 { name="DeLorean"; version="1.5.0"; sha256="1ry6j4mvxms9hddi9c56p9yhjh66fzss41wqkf6xq398h1wbn4q1"; depends=[BH broom coda dplyr fastICA functional ggplot2 kernlab lattice MASS memoise Rcpp RcppEigen reshape2 rstan rstantools seriation StanHeaders stringr]; }; DeRezende_Ferreira = derive2 { name="DeRezende.Ferreira"; version="0.1.0"; sha256="05c99z3hlwwm0p02cl9z6gjwfxfq2b2qn90l85270bi16llgf42h"; depends=[xts]; }; DealGPL570 = derive2 { name="DealGPL570"; version="0.2.0"; sha256="1c202gzbhqaisxvpiiajcbfsjnqrvygd19304m2n89ansv81vi8r"; depends=[affy dplyr GEOquery stringr tibble]; }; - DecisionAnalysis = derive2 { name="DecisionAnalysis"; version="1.0.0"; sha256="1d0b534s9fidgl5q8q8g5s58v6wv3md4pl5zm5r5q3jlr6z8q5n3"; depends=[Cairo data_tree DiagrammeR dplyr ggplot2 gridExtra tidyr viridisLite]; }; DeclareDesign = derive2 { name="DeclareDesign"; version="0.20.0"; sha256="0zdpiwh74ljc57s4cgak2j8zg3zyz9f3b47dambw2zdiy0db6wk8"; depends=[estimatr fabricatr generics randomizr rlang]; }; DecorateR = derive2 { name="DecorateR"; version="0.1.1"; sha256="1dvyadlksqv8ns043yh91f6kw162k6r0zwn13j1g6pvismw04br9"; depends=[rJava RWeka RWekajars]; }; Deducer = derive2 { name="Deducer"; version="0.7-9"; sha256="14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6"; depends=[car e1071 effects foreign ggplot2 JGR MASS multcomp plyr rJava scales]; }; @@ -1047,20 +1055,20 @@ in with self; { DensParcorr = derive2 { name="DensParcorr"; version="1.1"; sha256="1ifkg7cpimf27yhr60rks77r16kmhwa5h10wv7b64sbfncnyzfmj"; depends=[clime gplots]; }; Density_T_HoldOut = derive2 { name="Density.T.HoldOut"; version="2.00"; sha256="0kh5nns1kqyiqqfsgvxhx774i2mf4gcim8fp5jjyq577x4679r31"; depends=[histogram]; }; DepLogo = derive2 { name="DepLogo"; version="1.0"; sha256="0h4jpflf8amip62r936lg0k428gypag296kwl58w1d0qa5jyxrkk"; depends=[]; }; - DepthProc = derive2 { name="DepthProc"; version="2.1.2"; sha256="1habp2jq376zwclr17n9aw611v422783r7nfzkh1bl6yv0mchnjy"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; + DepthProc = derive2 { name="DepthProc"; version="2.1.3"; sha256="1dq5y6fgmm00imkim4v2s6kn4z5qnwa0dkfkcq4pap7imvi35aab"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; Deriv = derive2 { name="Deriv"; version="4.0"; sha256="03mlfy8jzzzbh2l18gnmw0a71n9savx4cw72yhkxq93v2xj8fy3n"; depends=[]; }; - DescTools = derive2 { name="DescTools"; version="0.99.32"; sha256="14sywl9k59j5h84gwddphk1xfvyd55l72axii9fgiifcjvcwj0nk"; depends=[BH boot expm MASS mvtnorm Rcpp]; }; - DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.6"; sha256="0hv0f5azzykwr407q0qxkwja34q5nyzr23bnbfqlxcymgkbhv380"; depends=[DescTools foreign manipulate rstudioapi writexl]; }; + DescTools = derive2 { name="DescTools"; version="0.99.34"; sha256="01sj4p27npxvljg68sn75wd334mm4fkan5ydvr0h2kik620swwqy"; depends=[BH boot expm MASS mvtnorm Rcpp]; }; + DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.7"; sha256="0k9qsz6wn97gy23rzm1rr8c6az05xr01jnsqcxknalkx6hj8h1mg"; depends=[DescTools foreign manipulate rstudioapi writexl]; }; DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.7"; sha256="0241mbz0y3ala7fsb4fwjd0xigsk0wq77hfrjyvnnp97rfjfzmcv"; depends=[GGally ggplot2 plyr reshape2 scales]; }; DescriptiveStats_OBeu = derive2 { name="DescriptiveStats.OBeu"; version="1.3.1"; sha256="1bqq56m4vhmgijxpyllpy08xx29k0p7lhmd0iwa06jdw4lj5rdah"; depends=[dplyr jsonlite magrittr RCurl reshape]; }; DesignLibrary = derive2 { name="DesignLibrary"; version="0.1.4"; sha256="16j9ca3y8mcdbd64yqm6js4lb9hjc74dh4r5y3h1ifvwzj0a78yc"; depends=[DeclareDesign estimatr fabricatr generics glue randomizr rlang]; }; DetMCD = derive2 { name="DetMCD"; version="0.0.5"; sha256="034wb5hwpikli6h2rwiqr19qvzxrr4qwi4q436y7c5a5wgkfzgl5"; depends=[pcaPP Rcpp RcppEigen robustbase]; }; DetR = derive2 { name="DetR"; version="0.0.5"; sha256="1dd4nzkgj5pl9397aa0z3q5fpl27xbdf7q0pqbs821dyynylxzn9"; depends=[MASS pcaPP Rcpp RcppEigen robustbase]; }; - DetSel = derive2 { name="DetSel"; version="1.0.3"; sha256="0rd047nkdhil9ydizrhpqr9pcmi86bq0r0f14rbix6i9hplxz42v"; depends=[ash]; }; + DetSel = derive2 { name="DetSel"; version="1.0.4"; sha256="01mpjy1cmgbrchdjl0gmrq3zx3mlkznml1qcradj2v5mgz26ifrv"; depends=[ash]; }; Devore7 = derive2 { name="Devore7"; version="0.7.6"; sha256="1m18p8h9vv4v0aq2fkjyj39vzb8a09azbbczhfiv4y88w540i8nw"; depends=[lattice MASS]; }; Dforest = derive2 { name="Dforest"; version="0.4.2"; sha256="19jyph2zqfyq9vv22kb6fqy89l0vcviv19zgk10hbd7q850f6ryn"; depends=[ggplot2 rpart]; }; DiPhiSeq = derive2 { name="DiPhiSeq"; version="0.2.0"; sha256="11l2inf99vxz9k292307j8c2b25kc1066svy3vxrfl72rrm4fqa7"; depends=[]; }; - DiPs = derive2 { name="DiPs"; version="0.5.0"; sha256="1bm3zpdp20dz4bgi0jvp064nfb5van11v20605lfq4irf6nqs8j1"; depends=[liqueueR mvnfast plyr rcbalance]; }; + DiPs = derive2 { name="DiPs"; version="0.6.0"; sha256="03mi4f56896mnj5g0k7zdh90qcn3ahdxf62mvjy03ajvsdradm4p"; depends=[liqueueR mvnfast plyr]; }; DiSSMod = derive2 { name="DiSSMod"; version="1.0.0"; sha256="199yipbc2sx2lsl51rpfyh80bfxaahfd2llqmfsp946gvj7339hv"; depends=[MASS matrixcalc psych sfsmisc]; }; DiagrammeR = derive2 { name="DiagrammeR"; version="1.0.5"; sha256="0d73aiv4fra1xwq63n3139anp479ni7dh370lxc3rc15g5qayxq8"; depends=[downloader dplyr glue htmltools htmlwidgets igraph influenceR magrittr purrr RColorBrewer readr rlang rstudioapi scales stringr tibble tidyr viridis visNetwork]; }; DiagrammeRsvg = derive2 { name="DiagrammeRsvg"; version="0.1"; sha256="0j2cm1mx3zrb2k3pcrb96z2z3kws61gyyjsjjv5rqcb5lzdgi65k"; depends=[V8]; }; @@ -1080,13 +1088,13 @@ in with self; { DiffusionRjgqd = derive2 { name="DiffusionRjgqd"; version="0.1.1"; sha256="1yb1jaq324qm2x8cl3bs2dflnsx8yfygpw2m3kk5hzaai9gfkqjf"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; Digiroo2 = derive2 { name="Digiroo2"; version="0.6"; sha256="1b1ahhqz5largjadlk5n6nw2183c05k28mksb1wm26y0lps0vdgr"; depends=[maptools spatstat spdep]; }; DirectEffects = derive2 { name="DirectEffects"; version="0.2"; sha256="0cawn1i1cyczsr9zpcaky79dfdl9anfjgiaa2404capacnj3call"; depends=[Formula glue sandwich]; }; - DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.2"; sha256="060nscnn7wamnbb45a55wr6rirlbpwwjz0kxiw3aiqkm16ilzfbs"; depends=[]; }; + DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.3"; sha256="1qlfvzlig3a2v78fiq6sbbpxklmjczikxdw57m6mqngzrl9vdl2g"; depends=[]; }; DirectedClustering = derive2 { name="DirectedClustering"; version="0.1.1"; sha256="1shdqz0c5bbgknvfqr3ais26cb5mpywnah3d3584w97sy8v7gxm2"; depends=[igraph]; }; - Directional = derive2 { name="Directional"; version="4.1"; sha256="1irg9spq859k26xn6f2pinlcrfzmwxlw56aq4vx27n6b1f2c4kqg"; depends=[bigstatsr doParallel foreach MASS Rfast Rfast2 rgl]; }; + Directional = derive2 { name="Directional"; version="4.2"; sha256="0w0r73pvins39h2sfaqnxjjw3s386zpqrd5m04mc1m6mwslas0s1"; depends=[bigstatsr doParallel foreach MASS Rfast Rfast2 rgl]; }; DirichletReg = derive2 { name="DirichletReg"; version="0.6-3.1"; sha256="1lz4b166grrs6vs98mf6a0wg4hvh0p901h697h9dkfhkxw8cqj3f"; depends=[Formula maxLik rgl]; }; DisHet = derive2 { name="DisHet"; version="1.0.0"; sha256="056jcs1qpiyadnmlzd0cj4kp0qzkichxi0pdnxypyq1fsqnpvan3"; depends=[gtools matrixStats]; }; DisImpact = derive2 { name="DisImpact"; version="0.0.5"; sha256="1n0lyzv6abvrrcxj4zglyl9b0j4ldj0zkznh57frn1j1imb1na1l"; depends=[dplyr magrittr purrr rlang tidyselect]; }; - DiscreteFDR = derive2 { name="DiscreteFDR"; version="1.3-3"; sha256="1qdcmn74mmnk61y6lh76mnqk7hw7v3v67y0zljfz7s3h4vxpad4g"; depends=[Rcpp]; }; + DiscreteFDR = derive2 { name="DiscreteFDR"; version="1.3-4"; sha256="0r3z56xcb5als38rhydia482j5xl9kcgamdj6ibd22yi0ya6k4iv"; depends=[Rcpp]; }; DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.2"; sha256="0vjsvl4m4zccfgizv7mzidbbpzqcm101x448vllcdcrn2xlnkmnq"; depends=[Rsolnp]; }; DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1.1"; sha256="17w4vjvsm7jacvwckjczyah3hglq044r3m6vqdcrg8haz884rav2"; depends=[]; }; DiscreteQvalue = derive2 { name="DiscreteQvalue"; version="1.0"; sha256="19c2rmizrmpf5vmsfhnk5xswnngdlh1hfcj6k0qdp00kdfgj79ja"; depends=[]; }; @@ -1094,17 +1102,18 @@ in with self; { DiscriMiner = derive2 { name="DiscriMiner"; version="0.1-29"; sha256="1ii8aa4dwfk991qdnpmkva20wvs5fqcna9030c799ybf11qpdass"; depends=[]; }; Disequilibrium = derive2 { name="Disequilibrium"; version="1.0"; sha256="0cxwsn57rbwyq6lnr273z5z51nb83w45zg9msw4iqfsyq2z5r5a1"; depends=[Formula numDeriv optimr]; }; DisimForMixed = derive2 { name="DisimForMixed"; version="0.2"; sha256="00mknsalikangr17946877m5fy2jgkgasgl6ng4f2nr44f0q9l6q"; depends=[cluster dplyr]; }; - Distance = derive2 { name="Distance"; version="0.9.8"; sha256="19n1kjx7ikphp97118n0zwnv1prlxk9hcpn30ckxc4329m0cafvv"; depends=[mrds]; }; + Distance = derive2 { name="Distance"; version="1.0.0"; sha256="0pgrx2897fb3747vlgzkmr98vfl8wazvqbsbam705sp40mp0gwn7"; depends=[dplyr mrds rlang]; }; DistatisR = derive2 { name="DistatisR"; version="1.0.1"; sha256="0myzfki8yrk0nhgdgsqs4wjbqhzmkdil1g005hc7p4lz3gi09bfx"; depends=[car prettyGraphs]; }; - DistributionOptimization = derive2 { name="DistributionOptimization"; version="1.2.4"; sha256="0qyfi1l8908r98ian1l9q72iz2cyzp09ykgip7l3py2p3m9cg8wc"; depends=[AdaptGauss GA ggplot2]; }; - DistributionTest = derive2 { name="DistributionTest"; version="1.0"; sha256="0ga0cxk8i1n6p33ywy9j65df3p4ypnc6mimvkx3yi1diczln6dbx"; depends=[MASS]; }; + DistributionFitR = derive2 { name="DistributionFitR"; version="0.1"; sha256="0wg43gqsdy1ja0l489k27k9q1w2zq45wzmqnv9wfc734rf8kvlba"; depends=[doParallel foreach stringr]; }; + DistributionOptimization = derive2 { name="DistributionOptimization"; version="1.2.6"; sha256="0pp0f7c9szyx426bnnz4fz4vh5q73m8x896z6pqgx04b6v445361"; depends=[AdaptGauss GA ggplot2 pracma]; }; + DistributionTest = derive2 { name="DistributionTest"; version="1.1"; sha256="11xhr6yv42s1i4qqlb1pvzm8q2116v10gjlkhl0ml3id6lx27nmj"; depends=[MASS]; }; DistributionUtils = derive2 { name="DistributionUtils"; version="0.6-0"; sha256="08vq54pyqxlqsj6q6gsg5ikqa0z3x842j52ld5dxaq272p6xchvl"; depends=[]; }; - DivE = derive2 { name="DivE"; version="1.1"; sha256="1445pyw15dq48qsbnm2bgfm9xfffdww5xbhcs901ai0nyb3f7daa"; depends=[deSolve FME rgeos sp]; }; + DivE = derive2 { name="DivE"; version="1.2"; sha256="1czj89ljvpgl03471cknki2lc64swdqdpf5wsgicad35kgmlrwlh"; depends=[deSolve FME rgeos sp]; }; DivMelt = derive2 { name="DivMelt"; version="1.0.3"; sha256="03vkz8d283l3zgqg7bh5dg3bss27pxv4qih7zwspwyjk81nw3xmr"; depends=[glmnet]; }; DiversityOccupancy = derive2 { name="DiversityOccupancy"; version="1.0.6"; sha256="16x3fpchgd12mccvr1k11vjka97sy5vjvjcyd5y3pskgnpycc2sv"; depends=[dplyr ggplot2 glmulti MuMIn qpcR raster unmarked vegan]; }; DnE = derive2 { name="DnE"; version="2.1.0"; sha256="02cbfb3m9xf24wkgqc06k3k0rx7qlqh4ma43khg6fpvif6yyahrn"; depends=[]; }; DoE_MIParray = derive2 { name="DoE.MIParray"; version="0.13"; sha256="0lbcqfizgrnqmp0b2yn14br7xmabbhywy8h7161hx6hnvnam5r99"; depends=[combinat DoE_base]; }; - DoE_base = derive2 { name="DoE.base"; version="1.1-3"; sha256="0y195kf3fldis17z20blrqkav4xsmy9xq6ak3gw9mgb9x59y7661"; depends=[combinat conf_design lattice MASS numbers partitions vcd]; }; + DoE_base = derive2 { name="DoE.base"; version="1.1-4"; sha256="0x50fjjg5kjinr2yjwb84icw86nhcgc5dv26z1h44bcwablcz74n"; depends=[combinat conf_design lattice MASS numbers partitions vcd]; }; DoE_multi_response = derive2 { name="DoE.multi.response"; version="0.1.0"; sha256="1289jlp10999kvyg5adw3dyc2mhh20i6biyqjbxd6g80a8dajknx"; depends=[DoE_wrapper]; }; DoE_wrapper = derive2 { name="DoE.wrapper"; version="0.11"; sha256="08bgfaiivqqnkhjb18flk1cpa33rh70i6g8v25x1ma3ffxqrwh96"; depends=[AlgDesign DiceDesign DoE_base FrF2 lhs rsm]; }; DoEstRare = derive2 { name="DoEstRare"; version="0.2"; sha256="0y9ymw7114jk1rwiasq400bpgvkxv6rpc954c7v9mgxd3c2nfza7"; depends=[]; }; @@ -1124,22 +1133,21 @@ in with self; { DrillR = derive2 { name="DrillR"; version="0.1"; sha256="0n7pim5kk0wfdjcc67v4vvdb7wyhn5bcgi2a12nbyfyydss7pk1g"; depends=[httr]; }; DrugClust = derive2 { name="DrugClust"; version="0.2"; sha256="0acvjqwzkbjmy101m501l7fkfxzkp6zflwvn56li5307xv9ggnfg"; depends=[cclust cluster e1071 MESS ROCR]; }; DstarM = derive2 { name="DstarM"; version="0.3.0"; sha256="16vcv21dgnymhsy9j5x5pblnipf4hdyscajx6pr8kl6i95hs3hmj"; depends=[DEoptim ggplot2 Rcpp RcppArmadillo rtdists RWiener]; }; - DtD = derive2 { name="DtD"; version="0.2.1"; sha256="15xj4xwg8jis8v2d7yv4wqmihqdm47f4n4zy7kpp5n854dvv9f0p"; depends=[checkmate Rcpp RcppArmadillo]; }; + DtD = derive2 { name="DtD"; version="0.2.2"; sha256="1czspjdxjhbfk2df7wk0x3d1ilwrjqw4s4gdc4hq0gjcjqyx0c39"; depends=[checkmate Rcpp RcppArmadillo]; }; DunnettTests = derive2 { name="DunnettTests"; version="2.0"; sha256="1sf0bdxays10n8jh2qy85fv7p593x58d4pas9dwlvvah0bddhggg"; depends=[mvtnorm]; }; DySeq = derive2 { name="DySeq"; version="0.22"; sha256="1sx6mg0bcqb5ff6x305k43zx3fwd16rvxc7xb3ai5h3w7fs9zz7y"; depends=[boot MASS TraMineR]; }; Dykstra = derive2 { name="Dykstra"; version="1.0-0"; sha256="1rc1409ky0ysqr3ccq28yhbs94m6d0z2dfa66k4c7irxjvbagwz6"; depends=[]; }; DynClust = derive2 { name="DynClust"; version="3.13"; sha256="020zl2yljp47r03rcbzrbdmwk482xx27awwzv4kdrbchbzwhxqgm"; depends=[]; }; DynNom = derive2 { name="DynNom"; version="5.0.1"; sha256="1ahs93mks2z423sxk4wjgivdz4ggvwm87dha0aan4fg4jarai98s"; depends=[BBmisc compare dplyr ggplot2 magrittr plotly prediction rms shiny stargazer survival]; }; DynTxRegime = derive2 { name="DynTxRegime"; version="4.3"; sha256="1la4y560rcs163cqmvpwsb1n70n6714kprdxpnkd849caaa93zir"; depends=[dfoptim kernlab modelObj rgenoud]; }; - DynaRankR = derive2 { name="DynaRankR"; version="1.0.0"; sha256="1smxgsxl0s5ynlphssd2q59f40zxin8im91fdcvawchc4qj2lmgg"; depends=[dplyr rlang]; }; + DynaRankR = derive2 { name="DynaRankR"; version="1.1.0"; sha256="1fzicainh1dm016cglm2x6j1i2g5r71vgrj0dnsflbxc5v426sqm"; depends=[dplyr rlang]; }; DynamicDistribution = derive2 { name="DynamicDistribution"; version="1.1"; sha256="1s78hpj2pxjs4vixin1i816qjbn3wk7b8rd2zdjp4d4rbxifcqf5"; depends=[]; }; DynamicGP = derive2 { name="DynamicGP"; version="1.1-5"; sha256="12y56anyi3amn7czwkk4qakmgqq0mf80xrhb8ccy1sxzk7k86pfz"; depends=[lhs]; }; E4tools = derive2 { name="E4tools"; version="0.1.1"; sha256="1kmj1fddybjia9ninhcy75kdmq152zjw7s24chpqr5wsblffr3yx"; depends=[accelerometry anytime BBmisc chron data_table DataCombine doParallel doSNOW foreach ggplot2 hms scales signal]; }; EAinference = derive2 { name="EAinference"; version="0.2.3"; sha256="1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; }; EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; }; EBEN = derive2 { name="EBEN"; version="4.6"; sha256="0gcf5b2viiq69vs8bd8nhk65g9sbzgg212w7zpnz4y6cv9jkk5zz"; depends=[]; }; - EBMAforecast = derive2 { name="EBMAforecast"; version="0.52"; sha256="1809ia0dpkilprv7x19drp1v2qckk0wm596f1i1vl0k37wbhcziv"; depends=[abind Hmisc plyr Rcpp separationplot]; }; - EBPRS = derive2 { name="EBPRS"; version="2.0.1"; sha256="0xrkxfn3iw1gy89inl5k1654dcyjz8ipx2c2kfzi0522zrdpy9ff"; depends=[ROCR]; }; + EBPRS = derive2 { name="EBPRS"; version="2.0.3"; sha256="0fr0vqgsj4lc4kgqsvayzbjg2dzxn40y6nbwrhgx3j94ldl632zq"; depends=[ROCR]; }; EBglmnet = derive2 { name="EBglmnet"; version="4.1"; sha256="0wlscmimj74alcr8k5h1g3alvlpss4g2ah7zkpd42akam3zb4s5z"; depends=[]; }; EBrank = derive2 { name="EBrank"; version="1.0.0"; sha256="1qzhrr3n2zv31mjp224b35324nr9nigzazyfv11j4zhwl1ipf632"; depends=[]; }; ECFsup = derive2 { name="ECFsup"; version="0.1-2"; sha256="0fpcab0gjgsc3sx0plpx068rw3a7kfzs2nyrr477a5m0rcbqf1kh"; depends=[foreach Rcpp RcppArmadillo]; }; @@ -1154,20 +1162,20 @@ in with self; { EDISON = derive2 { name="EDISON"; version="1.1.1"; sha256="12cc13ng5fc4nm0nvqxqplpb2ycz4cln73xqkk85dka2fnpykjc7"; depends=[corpcor MASS]; }; EDMeasure = derive2 { name="EDMeasure"; version="1.2.0"; sha256="1gyv86vip0a3939dbbwz29xkqzncw24r68fzykdjnv3b995510iv"; depends=[dHSIC energy rBayesianOptimization]; }; EDOIF = derive2 { name="EDOIF"; version="0.1.1"; sha256="0lhaajiq01rrvpp2xq2n6ka7pd4xz0spxrf1xv8ljpi2w9kk4p7l"; depends=[boot distr ellipsis ggplot2 igraph simpleboot]; }; - EDR = derive2 { name="EDR"; version="0.6-6"; sha256="10m92p3fy5z2kca4h9awwmvs4pqri92habkvgjvjl5ira09yvyi7"; depends=[sm]; }; + EDR = derive2 { name="EDR"; version="0.6-7"; sha256="17rdqggladlnziql7s7iy2pgqv5n2parwsllsy3b358y0cc1bxdn"; depends=[sm]; }; EEM = derive2 { name="EEM"; version="1.1.1"; sha256="0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj"; depends=[colorRamps ggplot2 R_utils reshape2 sp]; }; EFA_MRFA = derive2 { name="EFA.MRFA"; version="1.0.7"; sha256="0vblfagcr9zqdzygjrbbgg2pdd9v058ryac5mzy2ry02m534iadm"; depends=[ggplot2 optimbase PCovR psych reshape2 scales]; }; EFAutilities = derive2 { name="EFAutilities"; version="2.0.0"; sha256="1vbpz9papk6vvch3kb2qm6nspa4llp4mpck6ky1j8kvkhjzm1za0"; depends=[GPArotation mvtnorm plyr]; }; EFDR = derive2 { name="EFDR"; version="1.0"; sha256="1344ysvrniqn1qv2hx9b9afg9fivccfrj393xy9cqz4j395b6jx0"; depends=[copula doParallel dplyr foreach gstat Matrix sp tidyr waveslim]; }; EFS = derive2 { name="EFS"; version="1.0.3"; sha256="1q8cf8dnxpv5s3lr9145y0wjhak4rz18dzah4xfs5qr4c8nlpl54"; depends=[party pROC randomForest ROCR]; }; - EGAnet = derive2 { name="EGAnet"; version="0.9.0"; sha256="0cb1xjv0m1qxm2slvhs3salxhqjmq71nnqji1nf22yrawsknn2xv"; depends=[corpcor doParallel dplyr fdrtool fitdistrplus foreach ggplot2 ggpubr glasso igraph iterators lavaan MASS Matrix matrixcalc mvtnorm NetworkToolbox OpenMx pbapply plotly plyr psych psychTools qgraph semPlot tidyselect wTO]; }; + EGAnet = derive2 { name="EGAnet"; version="0.9.3"; sha256="1zz7fkr82nxlxs5vzzj3ihcrfb7l6dix5xazljabiilc849x8cas"; depends=[dplyr glasso igraph lavaan Matrix NetworkToolbox plotly qgraph semPlot]; }; EGRET = derive2 { name="EGRET"; version="3.0.2"; sha256="02c9cakj7szywx0r4rylbdnk63b4npqp2i5x1fhxjy0j5bn0hc2f"; depends=[dataRetrieval fields foreach survival truncnorm]; }; EGRETci = derive2 { name="EGRETci"; version="2.0.3"; sha256="1fzcndah890nfd3fg83jhp5lpwb0xfyrccabgvilkrrm4i4x675m"; depends=[binom EGRET]; }; EHR = derive2 { name="EHR"; version="0.1-3"; sha256="1y12j0sjr1zp3bzha1p31f903js674l6ifjccw0y9718sry8dbv2"; depends=[logistf]; }; EHRtemporalVariability = derive2 { name="EHRtemporalVariability"; version="1.0.2"; sha256="14g1x4zdhzgm122nzsw9gfjqdgz5bcdzcywg0jk6p3df2vi6q6vb"; depends=[dplyr lubridate plotly RColorBrewer scales shiny viridis xts zoo]; }; EIAdata = derive2 { name="EIAdata"; version="0.0.5"; sha256="1dg59shsamd5hrf65p3y6wybskfhw875jf9ssv561b241i6dkn3i"; depends=[XML xts zoo]; }; EILA = derive2 { name="EILA"; version="0.1-2"; sha256="0wxl9k4fa0f7jadw3lvn97iwy7n2d02m8wvm9slnhr2n8r8sx3hb"; depends=[class quantreg]; }; - EIX = derive2 { name="EIX"; version="1.0"; sha256="1is5dr5pqinshw2gnlsdq0byldiha076j2yn2z4vfg0pdws9lggc"; depends=[DALEX data_table ggiraphExtra ggplot2 ggrepel iBreakDown MASS Matrix purrr scales tidyr xgboost]; }; + EIX = derive2 { name="EIX"; version="1.1"; sha256="0mz7q35w304mm412x6jqlr65ji7xfkb293iwrqgifgi2pc6f77ny"; depends=[DALEX data_table ggiraphExtra ggplot2 ggrepel iBreakDown MASS Matrix purrr scales tidyr xgboost]; }; EKMCMC = derive2 { name="EKMCMC"; version="0.1.0"; sha256="0sfj6w8780fik0ar9bg8zrxkj10wqagvwrngd58g50fc0z4lhr53"; depends=[numDeriv]; }; EL = derive2 { name="EL"; version="1.0"; sha256="13r7vjy2608h8jph8kwy69rnkg98b2v69117nrl728r3ayc46a18"; depends=[]; }; EL2Surv = derive2 { name="EL2Surv"; version="1.1"; sha256="0bn2481rf61qnia468y7k95hhazjaghrv919a2y9ar5wcz5nq2kk"; depends=[survival]; }; @@ -1177,22 +1185,21 @@ in with self; { ELT = derive2 { name="ELT"; version="1.6"; sha256="0vbrf912m6f80sqyyrp0z4jhq38fnmcy6hgwy0qh8wgk3p1aqm7c"; depends=[lattice latticeExtra locfit xlsx]; }; ELYP = derive2 { name="ELYP"; version="0.7-5"; sha256="1j2vwcs443x3pf4zypyvbkn8fb5if9b9hf1s821jjjpgach573sc"; depends=[survival]; }; EM_Fuzzy = derive2 { name="EM.Fuzzy"; version="1.0"; sha256="0sz4zkjn6rdzdqmkq6j24bd4sj91y5lan31bldxdfskgz0jpzhbr"; depends=[DISTRIB FuzzyNumbers]; }; - EMA = derive2 { name="EMA"; version="1.4.6"; sha256="0zsc6n149wkn39sa0gw838x6pg3a2g6h4sqd74672sgj4rzx0iip"; depends=[affy AnnotationDbi Biobase biomaRt cluster FactoMineR gcrma GSA heatmap_plus MASS multtest siggenes survival xtable]; }; + EMA = derive2 { name="EMA"; version="1.4.7"; sha256="04srg03ywx78cw4w3apqlbiarz1rdk0mq9a5b7mcrif9kc9bg756"; depends=[affy AnnotationDbi Biobase biomaRt cluster FactoMineR gcrma GSA heatmap_plus MASS multtest siggenes survival xtable]; }; EMAtools = derive2 { name="EMAtools"; version="0.1.3"; sha256="1kzna29kd6s2hgli5azrfz85mbyl1x6knvhhhny2scf7a1fcijsy"; depends=[DataCombine ggplot2 lmerTest sjstats]; }; EMC = derive2 { name="EMC"; version="1.3"; sha256="0sdpxf229z3j67mr9s7z4adzvvphgvynna09xkkpdj21mpml23p6"; depends=[MASS mvtnorm]; }; EMCluster = derive2 { name="EMCluster"; version="0.2-12"; sha256="03s828pczfll5fkwa0w6n4m4wb75paj6x0cxgg9r4qmw8w4ag464"; depends=[MASS Matrix]; }; EMD = derive2 { name="EMD"; version="1.5.8"; sha256="0bvwx5ry41cpj646v93vm50c6qb3m5d7mda9q7znmcr4sdf521j5"; depends=[fields locfit]; }; - EML = derive2 { name="EML"; version="2.0.1"; sha256="1d49ii08nmf16nyh16vlbvywkggwf4ljsdhv89bvfd6f07dly70h"; depends=[digest dplyr emld jqr jsonlite rmarkdown uuid xml2]; }; + EML = derive2 { name="EML"; version="2.0.2"; sha256="05hkm8kf17294by7jhvhbq0cqbpg042xkc5cgx9kzrgld8hxrwqm"; depends=[digest dplyr emld jqr jsonlite rmarkdown uuid xml2]; }; EMMAgeo = derive2 { name="EMMAgeo"; version="0.9.7"; sha256="1wz4zw45xfqbk589cpd188j7619h2ar2czfkisil9x8ksijfixls"; depends=[caTools GPArotation limSolve matrixStats shiny]; }; EMMIXcskew = derive2 { name="EMMIXcskew"; version="0.9-5"; sha256="1ys5kvns6jlw2lk9m6xcy71wx1d581cmphiaxnp3hsqimc8wz7hq"; depends=[MASS mnormt rgl]; }; - EMMIXgene = derive2 { name="EMMIXgene"; version="0.1.1"; sha256="0n23pkn7nfxd9bxhy2fggzadb034g31n4mcwcrvr366d40hqv3iq"; depends=[BH ggplot2 mclust Rcpp RcppArmadillo reshape scales]; }; + EMMIXgene = derive2 { name="EMMIXgene"; version="0.1.2"; sha256="1rkj8ihzrgv3834dvbq6wdk4nnzpa9g1if713anp76qv6gxch501"; depends=[BH ggplot2 mclust Rcpp RcppArmadillo reshape scales]; }; EMMIXmfa = derive2 { name="EMMIXmfa"; version="2.0.11"; sha256="06lfmpw908chhzx512anqacixvvx3y02wm1n4wmpb890rd85n11r"; depends=[]; }; EMMIXskew = derive2 { name="EMMIXskew"; version="1.0.3"; sha256="05y1ivbzbsfab90925l3ahzd3b8y5kjfk3f0p2s9s3sfyxphqah7"; depends=[KernSmooth lattice mvtnorm]; }; EMMLi = derive2 { name="EMMLi"; version="0.0.3"; sha256="1b36kyzvrdljmkysggv8jyaip78pj32ms0xhj2y568hd419lkh2p"; depends=[]; }; EMMREML = derive2 { name="EMMREML"; version="3.1"; sha256="0qwj4jlfhppjxwcjldh49b6idnagazrxybaid3k2c269wvxwvddq"; depends=[Matrix]; }; EMP = derive2 { name="EMP"; version="2.0.5"; sha256="0piagbxk8siagmvzqv2bh12g1y0hy3c0vkxpddlmp7gm3i304rpi"; depends=[ROCR]; }; EMSC = derive2 { name="EMSC"; version="0.9.0"; sha256="13d915g7iyv724x35i9mr8msy5mhrpqhhva21vdinxbjdy6vdlr9"; depends=[pracma]; }; - EMSHS = derive2 { name="EMSHS"; version="1.0.0"; sha256="1lpv3243z5765b1dihqz9hc3dpw76nwy14mmd4253sw8xpy25w41"; depends=[Rdpack]; }; EMSNM = derive2 { name="EMSNM"; version="1.0"; sha256="0rhaadzhq9jfpnwxfqcsb3yz96rqlwkm165k5n5jxzwxpg1rg2n0"; depends=[]; }; EMSaov = derive2 { name="EMSaov"; version="2.3"; sha256="1hpvwimhkl7za5s8j9n4a8883vy89jrxrhlh0k3cfprnndh4zz05"; depends=[shiny]; }; EMT = derive2 { name="EMT"; version="1.1"; sha256="0m3av1x3jcp3hxnzrfb128kch9gy2zlr6wpy96c5c8kgbngndmph"; depends=[]; }; @@ -1201,7 +1208,7 @@ in with self; { ENMeval = derive2 { name="ENMeval"; version="0.3.0"; sha256="0q5s8nxig8kbr0cblfmf3k20ri19fjs770a0fnzsk0kwlac414hw"; depends=[dismo doParallel foreach maxnet raster]; }; ENiRG = derive2 { name="ENiRG"; version="1.0.1"; sha256="0yjy7g0pia4g18h7mawkxn77dnnqcajnbml21rrv63qwlr347355"; depends=[ade4 fgui gdata miniGUI raster rgrass7 sp]; }; ENmisc = derive2 { name="ENmisc"; version="1.2-7"; sha256="07rix4nbwx3a4p2fif4wxbm0nh0qr7wbs7nfx2fblafxfzhh6jc7"; depends=[Hmisc RColorBrewer vcd]; }; - EPT = derive2 { name="EPT"; version="0.7.3"; sha256="0ymg16wd2dkn6nb0hq43niycydpy5dnadq4011a3815qrkyj7670"; depends=[]; }; + EPT = derive2 { name="EPT"; version="0.7.5"; sha256="1llypf8600mk62cqxnwv5fds8ypfx5is2qkpbp4bh70l3s3lvj31"; depends=[]; }; EQL = derive2 { name="EQL"; version="1.0-1"; sha256="0pa33h0f30l352m6ix296l55lvqxdaib666x2dwy9zx0lmk23w8m"; depends=[lattice ttutils]; }; EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0"; sha256="103wrry0cmikprihmgx8y4kk1pnbjis7rs1xw13w14v902xkr2rq"; depends=[BiasedUrn]; }; ERP = derive2 { name="ERP"; version="2.2"; sha256="17i04rgfj9crnvpi7mf2spwmaw9jgw4kn5fx6x9xbl9cvwwx6q4k"; depends=[corpcor fdrtool irlba mnormt pacman]; }; @@ -1221,14 +1228,15 @@ in with self; { EWOC2 = derive2 { name="EWOC2"; version="1.0"; sha256="1x3l332pmh69kl0c1rka264mi69avdm938mzd79ck4y3qcgn07vr"; depends=[MASS rjags]; }; EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; }; EZtune = derive2 { name="EZtune"; version="2.0.0"; sha256="1arrd9zkssb8ixx7r4nxwayksz1mk7jkvlcbm264pv9ya6kh3yrh"; depends=[ada e1071 GA gbm optimx rpart]; }; - Eagle = derive2 { name="Eagle"; version="2.1.1"; sha256="0sx9fg3awv086861jyj18a814m6jdckzdvds6375wyd5cvi2ifqd"; depends=[data_table ggplot2 ggthemes matrixcalc mmap R_utils Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; + Eagle = derive2 { name="Eagle"; version="2.2"; sha256="04r2ii4wdxwmx82qd2csiiy6kjim6zmjnp0851qhz9iry84f0g5s"; depends=[data_table ggplot2 ggthemes matrixcalc mmap R_utils Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; EasyABC = derive2 { name="EasyABC"; version="1.5"; sha256="17qv6y8sf2iwwqcv5wfg6sii259gv5jyr72dnfpir2bw78wb3mqx"; depends=[abc lhs MASS mnormt pls tensorA]; }; EasyHTMLReport = derive2 { name="EasyHTMLReport"; version="0.1.1"; sha256="1hgg8i7py7bx48cldyc7yydf0bggmbj3fx3kwiv9jh1x5wyh929z"; depends=[base64enc ggplot2 knitr markdown reshape2 scales xtable]; }; EasyMARK = derive2 { name="EasyMARK"; version="1.0"; sha256="10slkblbyxq98c3sxgs194dnkx996khfcpxj6jhz355dp35z7c9d"; depends=[coda doParallel foreach MASS random rjags stringr]; }; - EasyMx = derive2 { name="EasyMx"; version="0.2-1"; sha256="03yshzb4wh3n667z9lmrwsz16chpgnl8qv3qlx425mj5iiyv626z"; depends=[OpenMx]; }; + EasyMx = derive2 { name="EasyMx"; version="0.2-12"; sha256="00wj08nwv5zi5d4a1fss40f4cms4svam1hmmxvh60hvc55ygsc3z"; depends=[OpenMx]; }; EbayesThresh = derive2 { name="EbayesThresh"; version="1.4-12"; sha256="07a2dd3za2dc81n6m2xy794sclp3yw7f46lg1igaflh7m9407198"; depends=[wavethresh]; }; - Ecdat = derive2 { name="Ecdat"; version="0.3-4"; sha256="07c6cv8dnz7781i9aavr0gx573nkmqam5v157kkq7478ia1cccpb"; depends=[Ecfun]; }; - Ecfun = derive2 { name="Ecfun"; version="0.2-0"; sha256="1clxwmwd4lmhh7zqspqgn13vrzg40lbqzb0a7b90qla4hk9r4zm4"; depends=[fda gdata jpeg MASS RCurl stringi TeachingDemos tis XML xml2]; }; + Ecdat = derive2 { name="Ecdat"; version="0.3-7"; sha256="0isaysjagpx10fq47xs57ywr5jidi62g18zjv5a1jd3c0wswxbkv"; depends=[Ecfun]; }; + Ecfun = derive2 { name="Ecfun"; version="0.2-2"; sha256="0gal91rhyrgpdxalnsy9pn7s0pj444zscv1m7pdgfzlnqcmf1vlf"; depends=[BMA fda gdata jpeg MASS mvtnorm RCurl stringi TeachingDemos tis XML xml2]; }; + EcoDiet = derive2 { name="EcoDiet"; version="1.0.0"; sha256="19x2ypmsw6jnq1s0nqk3pdkwi5g3g92r6fgxrxlnyvd0jqi9l8b3"; depends=[coda ggplot2 rjags]; }; EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-5"; sha256="1953q374msvdw91m2nagxkwh5r9gnq5qss6l6mf34hayq3kwm8s9"; depends=[d3heatmap doParallel edgebundleR foreach ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; }; EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12.1"; sha256="075kgy6cxppkclk6nj5xs1f5yv9w8cpr09xwhf2101a6wswknb88"; depends=[DEoptim operators topmodel XML]; }; EcoIndR = derive2 { name="EcoIndR"; version="1.6"; sha256="1pichrwny5hyb19919ldbgkdxp1s6vs03yw0x43ww13ldi314zbn"; depends=[rgeos]; }; @@ -1239,7 +1247,7 @@ in with self; { Ecohydmod = derive2 { name="Ecohydmod"; version="1.0.0"; sha256="0imkzjqp3g28l42jz5m4p85wg5rawmn9hy1wys9xndnaliv6d7r2"; depends=[]; }; EconDemand = derive2 { name="EconDemand"; version="1.0"; sha256="1slpwiaxj7w21zdri9myrzwbwzl62m3cnp0g4fr2rkdlzgb6j5yj"; depends=[]; }; EdSurvey = derive2 { name="EdSurvey"; version="2.4.0"; sha256="1h27q1qml1ba1b39ymg2ma48738h3027hg5qpxpgkz01xvlzqii3"; depends=[car data_table Formula glm2 haven LaF lfactors lme4 MASS Matrix NAEPprimer quantreg RColorBrewer readr readxl rvest stringi stringr tibble wCorr WeMix xml2 xtable]; }; - EditImputeCont = derive2 { name="EditImputeCont"; version="1.1.4"; sha256="1gqi3mnxnhsynk63hr0ny93m60xq4a0sjc5x0p67l6xybn2fk011"; depends=[editrules igraph Rcpp]; }; + EditImputeCont = derive2 { name="EditImputeCont"; version="1.1.6"; sha256="1hpm198awl30i7vbg1jk578s2i3f2kskirb33xvampcwn8mz0nhh"; depends=[editrules igraph Rcpp]; }; EffectLiteR = derive2 { name="EffectLiteR"; version="0.4-4"; sha256="17mhp4acj0myr2b54hgbb3wi5j6a6q999nqr9lwcbx3plyrwlljl"; depends=[car foreign ggplot2 lavaan lavaan_survey nnet shiny survey]; }; EffectStars = derive2 { name="EffectStars"; version="1.9-1"; sha256="131w5bdc615gaa2czi4wyc2f96jcg24ahcmggajrvyhxmi6rag5x"; depends=[VGAM]; }; EffectStars2 = derive2 { name="EffectStars2"; version="0.1-3"; sha256="0yh4krqjh1jb7gjxb9z4f5bzarps0g9jfqbbva782a881dhcdl1x"; depends=[miscTools VGAM]; }; @@ -1247,12 +1255,11 @@ in with self; { EffectsRelBaseline = derive2 { name="EffectsRelBaseline"; version="0.5"; sha256="1dsnakcrgmlx44599ii92wvhxbxrh0hij59709wsskx1x1152zvh"; depends=[]; }; EfficientMaxEigenpair = derive2 { name="EfficientMaxEigenpair"; version="0.1.4"; sha256="1s0i9a2vk2g4f5gadsvzjfkw91hcjsrbyjg2vgnj1v17xrwgp40w"; depends=[]; }; EleChemr = derive2 { name="EleChemr"; version="1.1.0"; sha256="109dv7ayg5nm6zjd70dp8h5qqwrijikymzgb41dl8vx4pqhv43v3"; depends=[ggplot2]; }; - ElemStatLearn = derive2 { name="ElemStatLearn"; version="2015.6.26.2"; sha256="1ynp3fxzi095im584bgw9v8pzgs9p2v64csyhmf0m2hqyrr4myd0"; depends=[]; }; EloChoice = derive2 { name="EloChoice"; version="0.29.4"; sha256="1g8ivvnv16c2gniwd9xa9z89bm4rac0nrg3mcg1risgf9yk4rgm5"; depends=[psychotools Rcpp RcppArmadillo Rdpack]; }; EloOptimized = derive2 { name="EloOptimized"; version="0.3.0"; sha256="185vh8h6r5wqcbaq3glq8k3fr8jp6h3q2h2ly54agi6bi3fvbs05"; depends=[BAMMtools dplyr lubridate magrittr reshape2 rlang rlist]; }; - EloRating = derive2 { name="EloRating"; version="0.46.10"; sha256="03cnbmm18cfh0awg221j478sb5r4r1v4hcilj5chr8qr4i1xmjvz"; depends=[network Rcpp RcppArmadillo Rdpack sna zoo]; }; + EloRating = derive2 { name="EloRating"; version="0.46.11"; sha256="09nh3ia4s3c9yjhw0f0haqb26fryfc4lf9rgfcbqqzzwgdr1invj"; depends=[network Rcpp RcppArmadillo Rdpack sna zoo]; }; ElstonStewart = derive2 { name="ElstonStewart"; version="1.1"; sha256="1y2g4x3fhi78c2406bk8r8c3x9zhx8ya3qlbnypdm65j0minixsn"; depends=[digest kinship2]; }; - EmbedSOM = derive2 { name="EmbedSOM"; version="1.9.1"; sha256="050j943774zmay6b62rqsb9ifd55cy5p77l0fkrb7b42jgxdqwpy"; depends=[]; }; + EmbedSOM = derive2 { name="EmbedSOM"; version="2.1.1"; sha256="1w61dni4vsglxqdhwdy5dcmzb6hx1wb9fhfki8wmal1yaza23ljy"; depends=[FNN ggplot2 igraph Matrix Rtsne umap uwot]; }; EmiStatR = derive2 { name="EmiStatR"; version="1.2.2.0"; sha256="0xwmwbybiyb9688l5n98vir3rwbbjgpw5qb25p20lhlj1pqg95w1"; depends=[doParallel foreach lattice xts zoo]; }; EmissV = derive2 { name="EmissV"; version="0.665.1.0"; sha256="1xzpsr43pyvmvzbcw66cxv7qs9i8s7pg1w90l3ivx9mz7p8bfz8a"; depends=[data_table lwgeom ncdf4 raster sf sp units]; }; EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="2.0.1"; sha256="0k37lncjq14py3fvcr925gh66i31aphkniv5dn86gibxzdvbjnqc"; depends=[ggplot2 gridExtra]; }; @@ -1273,11 +1280,11 @@ in with self; { EnviroPRA = derive2 { name="EnviroPRA"; version="1.0"; sha256="0yirh3vy7wap0qmm3kvjz9y68gcvp9i8qshv80wh8aijxwklpr8n"; depends=[fitdistrplus kSamples MASS truncdist]; }; EnviroStat = derive2 { name="EnviroStat"; version="0.4-2"; sha256="0ckax6vkx0vwczn21nm1dr8skvpm59xs3dgsa5bs54a3xhn5z9hs"; depends=[MASS]; }; Epi = derive2 { name="Epi"; version="2.40"; sha256="046y10vwks5y84pzccmrn6d4pd6qz70imvp1hw5ywp8fnwzfh4g5"; depends=[cmprsk data_table etm MASS Matrix mgcv numDeriv plyr survival zoo]; }; - EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.12.0"; sha256="1i84fslz8sdngvkv34zhzjwzrzzxx6f4s31p8f5smmf028jlpyys"; depends=[]; }; + EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.13.0"; sha256="1m9gawd0fv0pl9q8n9rnid8shdy88kxw4hr5fvvf9ifngf8ffmqa"; depends=[]; }; EpiCurve = derive2 { name="EpiCurve"; version="2.2-1"; sha256="091q03lak2nfk83s10004qnwdng0gl4z92pc174mc41wns7f5d8v"; depends=[dplyr ggplot2 ISOweek RColorBrewer scales timeDate]; }; - EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.0"; sha256="0hpysjl8wfgylbp4ddxmi5msvlp1w70c6pxggc2bwdgap3s127f3"; depends=[deSolve ggplot2 reshape2]; }; + EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.1"; sha256="0m6yay3r7dqih19f76wxwgq6dh9p1zmp5d9ilj9nd262q61jcy53"; depends=[deSolve ggplot2 reshape2]; }; EpiEstim = derive2 { name="EpiEstim"; version="2.2-1"; sha256="1a21mskjvyz9qdvl3kkf0p15zn1nx1a49c5djp1lacrn6h7g8k9p"; depends=[coarseDataTools coda fitdistrplus ggplot2 gridExtra incidence reshape2 scales]; }; - EpiILM = derive2 { name="EpiILM"; version="1.4.2"; sha256="16vml2p7c4nv0lfis661x7b9wimrni1ncpa256dh99cps9508j28"; depends=[coda]; }; + EpiILM = derive2 { name="EpiILM"; version="1.5"; sha256="0726sb6jisicphchzbcswh8nkgx12cb6sfgwa4ll35nm3vrb5xb1"; depends=[adaptMCMC coda LaplacesDemon]; }; EpiILMCT = derive2 { name="EpiILMCT"; version="1.1.6"; sha256="0qhpmh28zmgqnsyfxgv06g2slix12nn2pglgpvagx2q40rs4fann"; depends=[coda igraph]; }; EpiModel = derive2 { name="EpiModel"; version="1.7.5"; sha256="0w7r26pcsw785rhd17j0sp840xa4mpsfiq04vk36afv27mgfx6wy"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm]; }; EpiReport = derive2 { name="EpiReport"; version="0.1.0"; sha256="1bfh7nrwmplsk7whvmsf0wxg795xrwvarxw974v58mjb282yp87s"; depends=[dplyr extrafont flextable ggplot2 knitr officer png rmarkdown tidyr zoo]; }; @@ -1303,7 +1310,7 @@ in with self; { EvoRAG = derive2 { name="EvoRAG"; version="2.0"; sha256="0gb269mpl2hbx1cqakv3qicpyrlfb4k8a3a7whhg90masbgmh8f6"; depends=[]; }; EvolutionaryGames = derive2 { name="EvolutionaryGames"; version="0.1.0"; sha256="1v6xpxk4kbjbmv8vh517rd76gyrd9znpxqdh4jqz8lvdpnpla4wv"; depends=[deSolve geometry ggplot2 interp MASS reshape2 rgl]; }; Evomorph = derive2 { name="Evomorph"; version="0.9"; sha256="1br2fyggwz2mxpic8sk384xq1lpbpv0j5gf6xyzhkn2n7kfpf6d5"; depends=[geomorph ggplot2 reshape2 stringr]; }; - ExPanDaR = derive2 { name="ExPanDaR"; version="0.5.0"; sha256="1xnikvdr2a1xahqg6rrpbsf269yppxg47b8ncdr8b3hiy1a5piwr"; depends=[corrplot dplyr DT ggplot2 kableExtra lfe lmtest multiwayvcov openssl rio scales shiny shinycssloaders stargazer tictoc tidyr zip]; }; + ExPanDaR = derive2 { name="ExPanDaR"; version="0.5.1"; sha256="10jgwvq04cf17kdsjggyvnvmkialgcl38r53k5vj64h2zfwyj2wx"; depends=[corrplot dplyr DT ggplot2 kableExtra lfe lmtest multiwayvcov openssl rio rlang scales shiny shinycssloaders stargazer tictoc tidyr zip]; }; ExPosition = derive2 { name="ExPosition"; version="2.8.23"; sha256="0x9400ggmgrnaish0cfgnyvw549g4ibfv9aj6vzq7j68n58vq405"; depends=[prettyGraphs]; }; Exact = derive2 { name="Exact"; version="2.0"; sha256="142yiz9bz1abgpdqkzgdsz3bp3dwbjlmyg29a62djb8630aicgyn"; depends=[]; }; ExactCIdiff = derive2 { name="ExactCIdiff"; version="1.3"; sha256="1vayq8x7gk1fnr1jrlscg6rb58wncriybw4m1z0glfgzr259103y"; depends=[]; }; @@ -1325,7 +1332,7 @@ in with self; { FAMILY = derive2 { name="FAMILY"; version="0.1.19"; sha256="1912l2zj2cmh8yx8lkg8fpgvfddn6wbi1vrr4yx04mh73gk1s5mk"; depends=[pheatmap pROC]; }; FAMT = derive2 { name="FAMT"; version="2.5"; sha256="0mn85yy9zmiklfwqjbhbhzbawwp2yqrm9pvm8jhasn9c3kw1pcp2"; depends=[impute mnormt]; }; FAMoS = derive2 { name="FAMoS"; version="0.2.0"; sha256="08xyj7bnkckyk0d0kxkz7nqm7ib5by0wqmx54pwk3ak4mmh9arzi"; depends=[future R_utils]; }; - FAOSTAT = derive2 { name="FAOSTAT"; version="2.0"; sha256="06z8c964sf73ld4v9vybqjsdxskxp3ssyv0a3mpcs9la5y7n9jaz"; depends=[classInt data_table ggplot2 labeling MASS plyr RJSONIO scales]; }; + FAOSTAT = derive2 { name="FAOSTAT"; version="2.1.1"; sha256="1s6kq7g8x0ja4v5b3lcs69xk6mkf9q20jzvkny3ckimwhlcfz26k"; depends=[classInt data_table ggplot2 labeling MASS plyr RJSONIO]; }; FARDEEP = derive2 { name="FARDEEP"; version="1.0.1"; sha256="0blvjakcpkh9vpxryk7qyaqnija0r375ckv37kjlr34xg8pg9qnm"; depends=[nnls preprocessCore]; }; FASeg = derive2 { name="FASeg"; version="0.1.9"; sha256="0lazx8dyycyycr8467m9rkxkxhp4r2w737kpkb40y59wncmbvkik"; depends=[]; }; FAdist = derive2 { name="FAdist"; version="2.2"; sha256="0nw3w4g7y846bm57xyjnb13g7z746kxf8mb2hnljwwsypcg6i2n8"; depends=[]; }; @@ -1335,9 +1342,9 @@ in with self; { FBN = derive2 { name="FBN"; version="1.5.1"; sha256="0723krsddfi4cy2i3vd6pi483qjxniychnsi9r8nw7dm052nb4sf"; depends=[]; }; FCGR = derive2 { name="FCGR"; version="1.0-0"; sha256="015nnnc9fasx0qjrc3lbxv14rqwyx36xzsw9076grwm5pqahrdsb"; depends=[kerdiest KernSmooth MASS mgcv nlme pspline sfsmisc]; }; FCMapper = derive2 { name="FCMapper"; version="1.1"; sha256="1yjh8rs65nqslvwv7x4rif469zds41s7v3vhq6pca1y17kvj2in1"; depends=[igraph]; }; - FCSlib = derive2 { name="FCSlib"; version="1.0.0"; sha256="0wgk3h03w5wlr8anlp779wqj7ivnlw3brlahc82mb92nq3yc0k5d"; depends=[tiff]; }; + FCPS = derive2 { name="FCPS"; version="1.1.0"; sha256="0svfd108nr9h45jiarnj686668hbp53g9gkl6kiiyskq3ws6hdn0"; depends=[DataVisualizations ggplot2 mclust]; }; + FCSlib = derive2 { name="FCSlib"; version="1.1.0"; sha256="0sxpzcj6lard3xf24pq42iaryc3idccb076y69swckm0ixhrg85w"; depends=[tiff]; }; FD = derive2 { name="FD"; version="1.0-12"; sha256="0xdpciq14i8rh7v6mw174hip64r7mrzhx7gwri3vp9y7a1380sbi"; depends=[ade4 ape geometry vegan]; }; - FDGcopulas = derive2 { name="FDGcopulas"; version="1.0"; sha256="1i86ns4hq74y0gnxfschshjlc6if3js0disjb4bwfizaclwbw3as"; depends=[numDeriv randtoolbox Rcpp]; }; FDRSeg = derive2 { name="FDRSeg"; version="1.0-3"; sha256="0dh6m5vlx664kryh56jzi3zxydjwa5217nhbwn6adp0q5qdh6d8a"; depends=[Rcpp stepR]; }; FDRreg = derive2 { name="FDRreg"; version="0.1"; sha256="17hppvyncbmyqpi7sin9qsrgffrnx8xjcla2ra6y0sqzam1145y4"; depends=[fda mosaic Rcpp RcppArmadillo]; }; FDRsampsize = derive2 { name="FDRsampsize"; version="1.0"; sha256="0g8kawzyi9x5yndvh330wzqw6rvcnprwq56ngd0j6z51hvvw8qhw"; depends=[]; }; @@ -1345,7 +1352,6 @@ in with self; { FENmlm = derive2 { name="FENmlm"; version="2.4.3"; sha256="1a205a4iv54haixanyzx210lzqg7cnryjvqayvkdj1lhmdql4anw"; depends=[Formula MASS numDeriv Rcpp]; }; FEprovideR = derive2 { name="FEprovideR"; version="1.1"; sha256="02hfdk9qhaq4y19p700w2i7qsdp4z2kyww0pr0pijfivkqks0vpi"; depends=[ggplot2 Matrix poibin]; }; FFD = derive2 { name="FFD"; version="1.0-6"; sha256="19yqb45qj54fmjkqfjbcqsx3wz6fk8inrqif9ds93xjkm6aaiqgp"; depends=[R2HTML tkrplot]; }; - FFTrees = derive2 { name="FFTrees"; version="1.4.0"; sha256="0s2h81vdh8d41kwz5ja831q11wrb7ywdd7aq46x3y9sgg3aabd44"; depends=[caret circlize e1071 igraph pROC progress randomForest rpart stringr yarrr]; }; FField = derive2 { name="FField"; version="0.1.0"; sha256="05q16v2vv64qhbnf2l66dwzmvgzyaq8vxwwdabp534bw7z7zpi8q"; depends=[]; }; FGSG = derive2 { name="FGSG"; version="1.0.2"; sha256="1r3sjhzf9gcnbcx6rqr1s555z8lcwm3fxl096md2jji336ijlk79"; depends=[]; }; FGalgorithm = derive2 { name="FGalgorithm"; version="1.0"; sha256="1dq6yyb3l6c9fzvk9gs6pb240xb5hvc6fh8p3qd3c91b3m289mcc"; depends=[]; }; @@ -1374,6 +1380,7 @@ in with self; { FOCI = derive2 { name="FOCI"; version="0.1.1"; sha256="1q5zchbm7h5jizk5rl8xr31bdx9h88mzf8ih8kdqmsvpk1ckk13f"; depends=[dplyr magrittr proxy RANN]; }; FPCA2D = derive2 { name="FPCA2D"; version="1.0"; sha256="18bb90ppd9gd8pg9jxfyfkmlsaqk8w25fgaj9fk18ybm2nhsxqm6"; depends=[corpcor]; }; FPCA3D = derive2 { name="FPCA3D"; version="1.0"; sha256="1hrk9caad2s76dx59clxhia45a85khk1y2ii7955f336x55q34a5"; depends=[]; }; + FPDclustering = derive2 { name="FPDclustering"; version="1.4.1"; sha256="19n6fx3fyvnlwh8w8bi8ki3wfmvzdlxl557cj3a9y1wmm3fv2drz"; depends=[cluster ExPosition mvtnorm rootSolve ThreeWay]; }; FPV = derive2 { name="FPV"; version="0.5"; sha256="0pxa8lbcxw2hx2n0frkx0pdndlcfm7gnh9qay9q53cf5gqzzwvvc"; depends=[FuzzyNumbers FuzzyNumbers_Ext_2]; }; FRACTION = derive2 { name="FRACTION"; version="1.0"; sha256="0g25dzsbharsq8bzfka96zccaqppdclax24mz5m080ddg4y8zj49"; depends=[]; }; FRAPO = derive2 { name="FRAPO"; version="0.4-1"; sha256="0mjcrplxr0cyybp5hzzwbq5j03w0f3iiiv1yk7mdqr5gb368dchq"; depends=[cccp Rglpk timeSeries]; }; @@ -1382,44 +1389,47 @@ in with self; { FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.1.0"; sha256="1gi637fwfpwbghms96bmfqs7zirjskd9hxiw43s0765h3ypjqwx1"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; FRK = derive2 { name="FRK"; version="0.2.2"; sha256="0m0ngxanyq19myzza4fb75k9vb67mv17iny847bv9qrgg2vbm5r8"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime sparseinv]; }; FRegSigCom = derive2 { name="FRegSigCom"; version="0.3.0"; sha256="0w0yhch75wdx6phf5h4radipgpndv5bfxva2pzzd99fkmws4sswn"; depends=[fda Matrix Rcpp RcppEigen]; }; - FSA = derive2 { name="FSA"; version="0.8.26"; sha256="1gnmch98y8b6bssnz769d987rmvyiadrpshpjf5qihcnnq6jp2sy"; depends=[car dplyr dunn_test epitools gplots lmtest plotrix plyr sciplot withr]; }; + FSA = derive2 { name="FSA"; version="0.8.30"; sha256="0f567dm1fcffjsmm4j8c81q748rl944ia5ll22b2ayvv3qf7v9y7"; depends=[car dplyr dunn_test lmtest plotrix plyr sciplot withr]; }; FSAdata = derive2 { name="FSAdata"; version="0.3.8"; sha256="0i7wkz0baxcf1dv6qvc891b4ja4x65p4qicil472k6a9gcf5d4qm"; depends=[]; }; FSInteract = derive2 { name="FSInteract"; version="0.1.2"; sha256="1aci1398aaz0nrl5jy6yh7xik355wf7pwngrsak4qsi94vdj05iy"; depends=[Matrix Rcpp]; }; FSMUMI = derive2 { name="FSMUMI"; version="1.0"; sha256="06ri1zi86cm4arjdlp2pha2bvcc8vz6irvd9n3ja074hv62wxcw4"; depends=[FuzzyR lsa]; }; + FSSF = derive2 { name="FSSF"; version="0.1.1"; sha256="024g2rv64yqxmbbwrbkpkrzdfshl0n6jll6axsgsp4q4ia4r9401"; depends=[Rcpp RcppArmadillo]; }; FSTpackage = derive2 { name="FSTpackage"; version="0.1"; sha256="1fjqsl59fg4x9vkbv4b0qmfxlaa2q3rzpl40grv24yg6ixfagmdb"; depends=[CompQuadForm MASS Matrix mvtnorm SKAT]; }; FSelector = derive2 { name="FSelector"; version="0.31"; sha256="1ryqrwz9h7ggxvmxyw4viajlkvd3r7i6ihcfrwsz6axyk5y0qarg"; depends=[digest entropy randomForest RWeka]; }; FSelectorRcpp = derive2 { name="FSelectorRcpp"; version="0.3.3"; sha256="0x0jysqjvplzmcjs223wma9ng2pyd9mcbdgqmgsiifv0wdic07vi"; depends=[BH foreach iterators Rcpp RcppArmadillo testthat]; }; - FSinR = derive2 { name="FSinR"; version="1.0.6"; sha256="1w2sw0z4qyhnz3h790kznwmka5ml4n0kdqkynnwprsyclvxsfdwn"; depends=[caret class digest dplyr e1071 GA mlbench neuralnet prodlim purrr Rdpack rlang rpart tidyr]; }; + FSinR = derive2 { name="FSinR"; version="1.0.8"; sha256="07cabw86x07sg3mhpzdfrgw20i2mhnxk21zxbzwv4dgld66g9g08"; depends=[caret class digest dplyr e1071 GA mlbench neuralnet prodlim purrr Rdpack rlang rpart tidyr]; }; FTICRMS = derive2 { name="FTICRMS"; version="0.8"; sha256="0kv02mdmwflhqdrkhzb55si5qnqqgdadgyabqc2hwr6iccn7aq8c"; depends=[lattice Matrix]; }; FUNTA = derive2 { name="FUNTA"; version="0.1.0"; sha256="02yxz95s2hs26mfmgwhv5d54yyjz0aczjpnay8b4gpzbpd6aci61"; depends=[]; }; FWDselect = derive2 { name="FWDselect"; version="2.1.0"; sha256="0w0hkmhcz7h1lixk7p3yffbbalgxwh2lv463vqz361k80sri6wz7"; depends=[cvTools mgcv]; }; FacPad = derive2 { name="FacPad"; version="3.0"; sha256="0h7knzin0rfk25li127zwjsyz223w7nx959cs328p6b2azhgn59b"; depends=[MASS Rlab]; }; FactMixtAnalysis = derive2 { name="FactMixtAnalysis"; version="1.0"; sha256="1l4wfp39b7g38vdk6jpd5zq08sjhsg0s71f662aca2rj6l3a2x3r"; depends=[MASS mvtnorm]; }; FactoClass = derive2 { name="FactoClass"; version="1.2.7"; sha256="0hvlr9cw6wfckl8rzl5qqyp0h8rv8gcnyj6x930jq7h44kj0ji7d"; depends=[ade4 ggplot2 ggrepel KernSmooth scatterplot3d xtable]; }; - FactoInvestigate = derive2 { name="FactoInvestigate"; version="1.5"; sha256="079x3n6jh69vrgqmjskccscd21g0vni6bsyga928gndz9nvh3807"; depends=[FactoMineR ggplot2 rmarkdown rrcov]; }; - FactoMineR = derive2 { name="FactoMineR"; version="2.1"; sha256="1b2jsv8vlaynknd7nlra6fdmr56n7678q5s28rqmagbadiqwvj4h"; depends=[car cluster ellipse flashClust ggplot2 ggrepel lattice leaps MASS scatterplot3d]; }; + FactoInvestigate = derive2 { name="FactoInvestigate"; version="1.6"; sha256="0y32k41i1mfh1yxkd8mcgw7x2xkibq9xqf2vgysnibgnabwi15w2"; depends=[FactoMineR ggplot2 rmarkdown rrcov]; }; + FactoMineR = derive2 { name="FactoMineR"; version="2.3"; sha256="0ldgf3daksh6lpblhqys67m4mxqx3q9s9n5plfam6dwshfik0ky6"; depends=[car cluster ellipse flashClust ggplot2 ggrepel lattice leaps MASS scatterplot3d]; }; + FactorAssumptions = derive2 { name="FactorAssumptions"; version="1.1.2"; sha256="0k5jjqfajrq5wc0vp07s6kbfyjks6124hpy09nxw2blrai66vhcm"; depends=[MASS psych]; }; FactorsR = derive2 { name="FactorsR"; version="1.4"; sha256="1nw63j9bi4x09pgdvdml0w0qxfy1dda5hkxbhd3d6f7rky1z0nyf"; depends=[]; }; - Factoshiny = derive2 { name="Factoshiny"; version="2.1"; sha256="0h2qf89z9yb8b1a9hh0l50vnhzbz1xb7akm5390xmlpybh22jagl"; depends=[colourpicker DT FactoInvestigate FactoMineR ggplot2 ggrepel missMDA shiny shinydashboard shinyjqui]; }; + Factoshiny = derive2 { name="Factoshiny"; version="2.2"; sha256="0niic7k9z1j3684l0wmyhkbm1x8a2djig6m2k0s49vgfdaf1hcc0"; depends=[colourpicker DT FactoInvestigate FactoMineR ggplot2 ggrepel missMDA shiny shinydashboard shinyjqui]; }; Fahrmeir = derive2 { name="Fahrmeir"; version="2016.5.31"; sha256="16fbc1zb9x9p04bl7y5nd375pha6bd3hfqqchlk1bqxrj4879y5g"; depends=[]; }; FamEvent = derive2 { name="FamEvent"; version="2.0"; sha256="07xb1k3yxsbwxxg6avw2gvai2qpjjd1imjggr8q6lkgcd8j3yxrb"; depends=[eha kinship2 MASS pracma survival truncnorm]; }; Familias = derive2 { name="Familias"; version="2.4"; sha256="1k6ig2zfkr1a4s3s85ygixmmsrb5m8vqqab8l5ffkspgjvh4dfz2"; depends=[kinship2 paramlink Rsolnp]; }; FarmSelect = derive2 { name="FarmSelect"; version="1.0.2"; sha256="174rzv9k0hdcfdkv7bisy70rip2iy0bnj3qa54i00wqwjdglgjdn"; depends=[fBasics ncvreg Rcpp RcppArmadillo]; }; - FarmTest = derive2 { name="FarmTest"; version="2.0.0"; sha256="0dr7cr3dcvsl02sll16zfyyq1kcv5qmj29psi75h73bzanx3h64n"; depends=[Rcpp RcppArmadillo]; }; + FarmTest = derive2 { name="FarmTest"; version="2.0.1"; sha256="1inwbaa4nckny4cwypqs2s2jmzj61vb6dpjyf8fn2mxdy4qjb9zd"; depends=[Rcpp RcppArmadillo]; }; FastBandChol = derive2 { name="FastBandChol"; version="0.1.1"; sha256="1hlgipn792vaylvc0r44clkjcnkns6p241a1fs8sb3gpq81naazk"; depends=[Rcpp RcppArmadillo]; }; + FastCUB = derive2 { name="FastCUB"; version="0.0.2"; sha256="04bphkfkkjp7gfnsgar5gcxzmkr437mz6y8mbf015m7f4cvdhzjz"; depends=[CUB Formula]; }; FastGP = derive2 { name="FastGP"; version="1.2"; sha256="120qai1yw3yhwm762zridk78n4qclpivwm9f2hkij4bz851qibqv"; depends=[MASS mvtnorm rbenchmark Rcpp RcppEigen]; }; FastGaSP = derive2 { name="FastGaSP"; version="0.5.1"; sha256="09dymlchc4ij5iwwi2hl7shlqr8610lv7r2qh3sbrh7j5vnr5sc9"; depends=[Rcpp RcppEigen RobustGaSP]; }; FastHCS = derive2 { name="FastHCS"; version="0.0.6"; sha256="0ds0g2lbzc33is8g8yxfs6hpvl2zdrgi9fqa7c71c3b3fwn9cqlv"; depends=[matrixStats Rcpp RcppEigen robustbase]; }; - FastImputation = derive2 { name="FastImputation"; version="2.0"; sha256="0zhin8000c78kba6zly9mvpxdxx68kcsh2hn697pxkl73wqsz3p5"; depends=[Matrix]; }; FastKM = derive2 { name="FastKM"; version="1.0"; sha256="0sqxd2pg9y6yn1lnxni32ca3bgbmz04k9z37q9pzgijvf9qvik3f"; depends=[rARPACK]; }; FastKNN = derive2 { name="FastKNN"; version="0.0.1"; sha256="1iz8ybzkvbyqwb00s7cp1zvy9xlmyjid441mf62dq08a0zncnyss"; depends=[assertthat pdist]; }; FastLZeroSpikeInference = derive2 { name="FastLZeroSpikeInference"; version="2018.12.10"; sha256="0ybpmns7bc1j5xzqjl7734grihmvvpa3h52gixv3h70l0r89d8ys"; depends=[]; }; FastPCS = derive2 { name="FastPCS"; version="0.1.3"; sha256="152fy5hq675n1mjdsi31a77rmi3vylvvbfgywrh62chy5xa1bf34"; depends=[matrixStats Rcpp RcppEigen]; }; FastRCS = derive2 { name="FastRCS"; version="0.0.8"; sha256="11kqd8aii9sy65m5inxiqggyajb41iy6w92zp5wggx7pbg9m6lmy"; depends=[matrixStats Rcpp RcppEigen]; }; - FastRWeb = derive2 { name="FastRWeb"; version="1.1-1.1"; sha256="08hqsiglv9ivcv4xmpqqjhqmg3ccba5xa7jahay0m71w2n8m271y"; depends=[base64enc Cairo]; }; + FastRWeb = derive2 { name="FastRWeb"; version="1.1-3"; sha256="1913pyjzxw8kw5hbr8mfwk2mjjfz7cyl6sh71z6cc0jl0af3p1kn"; depends=[base64enc Cairo]; }; FastSF = derive2 { name="FastSF"; version="0.1.1"; sha256="1xajav45h57hchzkvl2pb4mz9xy433lq74jnry0icid8dai5xhwb"; depends=[limSolve Rcpp RcppArmadillo]; }; FatTailsR = derive2 { name="FatTailsR"; version="1.7-5"; sha256="1l2anaf4kixidmvya64ni5b78bl9w2n6xf1lnf297lkdka8gxigw"; depends=[minpack_lm timeSeries]; }; FateID = derive2 { name="FateID"; version="0.1.9"; sha256="0n02591wpi4n0ga42v4xd1jzskcl56nvvls48sdkcnvc7cyi0hjv"; depends=[lle locfit pheatmap princurve randomForest RColorBrewer Rtsne som umap]; }; - FeaLect = derive2 { name="FeaLect"; version="1.14"; sha256="1h6jc8n57mvyz3gi2jdx5xacwv5iim5sx86qzrg3v1higfr54b1l"; depends=[lars rms]; }; + FcircSEC = derive2 { name="FcircSEC"; version="1.0.0"; sha256="06c1n0xx1q0zh16bgylwbvqzp8q4c5bj626shm2c6r8f9kcjgysh"; depends=[Biostrings seqRFLP stringi]; }; + FeaLect = derive2 { name="FeaLect"; version="1.20"; sha256="1dfi0v313x4a4ck98zlk6yr3nfjrdwr5649x9dx3i7yfkypk2k5c"; depends=[lars rms]; }; FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.4"; sha256="00yrji3grqgzg8c1hwqq5kb9xgqlnzwymy0b38cwixadc5w5lq8m"; depends=[BH digest magrittr Matrix Rcpp]; }; FedData = derive2 { name="FedData"; version="2.5.7"; sha256="07qgqhd3pg86qsih1ap7j02vriwabqna974q68bapfm52qnvm77z"; depends=[curl data_table devtools dplyr foreach Hmisc httr igraph lubridate magrittr ncdf4 raster readr rgdal rgeos sf sp stringr tibble xml2]; }; FeedbackTS = derive2 { name="FeedbackTS"; version="1.5"; sha256="120labhmisw1x1bq8c4bl6l14vayvb9xcm6jsj1awacypgrr2ar2"; depends=[automap gstat mapdata maps proj4 sp]; }; @@ -1437,6 +1447,7 @@ in with self; { FindAllRoots = derive2 { name="FindAllRoots"; version="1.0"; sha256="0n4wfm21qj5zn06jqnzxa0w9mfn18dqi6hk1jjqa56dxqw1k7vw0"; depends=[]; }; FindIt = derive2 { name="FindIt"; version="1.2.0"; sha256="0zrvkvj907fw86jnzzlwk4d90hi42nq45jprp16xryxb7xxii6i8"; depends=[arm glinternet glmnet igraph lars limSolve lmtest Matrix quadprog sandwich]; }; FinePop = derive2 { name="FinePop"; version="1.5.1"; sha256="184707yvh2mydx42vxrdgv0n4v2dad4an7c4yvlyb9d7z6h0sw2x"; depends=[]; }; + FinePop2 = derive2 { name="FinePop2"; version="0.4"; sha256="1rzsbxbxynn0pl6dlkmsjxiph403ffwlb2brsi8cm4r22jjhcx4i"; depends=[]; }; FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; }; FisPro = derive2 { name="FisPro"; version="1.0"; sha256="0wj5xf8qcrbmfixmsirwaf9yl5gk0bb588csp867c8n5jnqqyq0p"; depends=[Rcpp Rdpack]; }; FishResp = derive2 { name="FishResp"; version="1.0.3"; sha256="0cydxs9knbmsyxrhqi68aqa12x20k6wcs6jw7z58k2jisypwqclw"; depends=[chron lattice mclust respirometry rMR]; }; @@ -1452,7 +1463,6 @@ in with self; { FlexScan = derive2 { name="FlexScan"; version="0.1.0"; sha256="02p8rh3krh30hmzykm03qvm0g1qcrqzcgzlzlww61pswd9j1g53m"; depends=[smerc sp spdep]; }; FlickrAPI = derive2 { name="FlickrAPI"; version="0.1.0.0"; sha256="0bbk7ac4s3gbcjhfg3yz06pxjid3hpd0mqzxzlj5sghn95f479h9"; depends=[jsonlite magrittr RCurl stringr]; }; FloodMapper = derive2 { name="FloodMapper"; version="1.0"; sha256="09pr6324namqrwdr2impgqmdmsf34g9pq91091cg9b1031djgzyq"; depends=[magick raster rgdal sp]; }; - FlowCAr = derive2 { name="FlowCAr"; version="1.1.1"; sha256="0ddds4726rf38153biz5sgmmyi2knw43vmv2fa7njrjxadsiwclq"; depends=[enaR LIM limSolve]; }; FlowRegEnvCost = derive2 { name="FlowRegEnvCost"; version="0.1.1"; sha256="0lw4kv4z0s23jy11y53rxxh7zxa7vajxrcnjgxd74xxs64vjlj88"; depends=[zoo]; }; FlowScreen = derive2 { name="FlowScreen"; version="1.2.6"; sha256="1s9xyrvfsgrl2zxm2an5qj3rs1qx7v7j8wc83jzl28pkwa5xr351"; depends=[changepoint evir zyp]; }; FluMoDL = derive2 { name="FluMoDL"; version="0.0.3"; sha256="0vp3w6hpph6svz8940w9yk9c5iv4n9mj94f9si1ks0xjbi948rqd"; depends=[dlnm mvmeta tsModel]; }; @@ -1463,7 +1473,8 @@ in with self; { ForecastComb = derive2 { name="ForecastComb"; version="1.3.1"; sha256="07cbiv172mpkwvg6svhwgavlfy2144ir3y1l7w37wbd0ygs514id"; depends=[forecast ggplot2 Matrix mtsdi psych quadprog quantreg]; }; ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; }; ForecastFramework = derive2 { name="ForecastFramework"; version="0.10.3"; sha256="1c57jfcd156468s0bj0v523clg6pnwbw5spkqchbyz0fxzadc14p"; depends=[abind dplyr lubridate magrittr R6 reshape2 tibble]; }; - ForestFit = derive2 { name="ForestFit"; version="0.4.7"; sha256="0p6nygykx4ad8vznpjdx2ipnxpbhmp9sz3pg50hgkhmhzdlpwk1h"; depends=[ars]; }; + ForecastTB = derive2 { name="ForecastTB"; version="1.0.1"; sha256="1wqgw4i65ajwj8la8mgv2qqm4ydgk90i6chdkd8h33rlwh8yddc6"; depends=[circlize decomposedPSF forecast ggplot2 gridExtra imputeTestbench PSF RColorBrewer reshape2]; }; + ForestFit = derive2 { name="ForestFit"; version="0.5.7"; sha256="08q4cibxhq02qawpyvc8cnr3x1gc8pi1rzdqq3i86764ssb2649a"; depends=[ars]; }; ForestGapR = derive2 { name="ForestGapR"; version="0.0.2"; sha256="0xig9nal83xg312kgq6dhi7n67sa8ixlnh79x957w3n5rv9kdyf2"; depends=[igraph raster rgeos sp spatstat VGAM viridis]; }; ForestTools = derive2 { name="ForestTools"; version="0.2.0"; sha256="0q9nk9n001bnz5hd8cxj6wmaf8c7g0kwfkpa0hk6ap42666rrrah"; depends=[APfun imager raster rgeos sp]; }; FormalSeries = derive2 { name="FormalSeries"; version="1.0"; sha256="09m4ifinasww0xfprs29xsrqhxxkw9zffb3919xnkkjkwp0nax4v"; depends=[]; }; @@ -1472,7 +1483,7 @@ in with self; { FossilSim = derive2 { name="FossilSim"; version="2.1.1"; sha256="1dffk14lszq84k61s1jar658qpjc1hm6rwa1gcwwvppvxj6gkvky"; depends=[ape TreeSim]; }; FourScores = derive2 { name="FourScores"; version="1.5.1"; sha256="1la9d1hfcmi0zg58yl0a7nj36giagh0fwrc7wxyqdq0c7zf1hfzq"; depends=[]; }; FourgameteP = derive2 { name="FourgameteP"; version="0.1.0"; sha256="15yn47737768fkjjv8ykc9lw7x58pq44k90d9d4c9hp20zw5f3by"; depends=[]; }; - FrF2 = derive2 { name="FrF2"; version="2.1"; sha256="01sihw40jyjy07i2cy7k4pk3ck13mb31djk15j2s37b786z05fmj"; depends=[BsMD DoE_base igraph scatterplot3d sfsmisc]; }; + FrF2 = derive2 { name="FrF2"; version="2.1-1"; sha256="0xvkhjn1rx7smval6jk78ck0z9qnjrccyrazw6bllss581vqlqjy"; depends=[DoE_base igraph scatterplot3d sfsmisc]; }; FrF2_catlg128 = derive2 { name="FrF2.catlg128"; version="1.2-1"; sha256="0i4m5zb9dazpvmnp8wh3k51bm0vykh4gncnhdg71mfk4hzrfpdac"; depends=[FrF2]; }; FractalParameterEstimation = derive2 { name="FractalParameterEstimation"; version="1.1.2"; sha256="16xm2g723dm1n1h6as6yvy92sigzhj31f269g5rrzqjcd4d5m8an"; depends=[]; }; Fragman = derive2 { name="Fragman"; version="1.0.9"; sha256="03vmvmnyza4i46v1awkdjz6ccbsiq49dm0mlmwsm801rq6yfihgp"; depends=[]; }; @@ -1481,11 +1492,10 @@ in with self; { FreeSortR = derive2 { name="FreeSortR"; version="1.3"; sha256="1m6ahhixbbizzn09pz71zvinrdshn3j6gmy05jdxa9d932agqk0w"; depends=[ellipse smacof vegan]; }; FreqProf = derive2 { name="FreqProf"; version="0.0.1"; sha256="1yqn2435l2sghfcv5mma0rv9yqvpa69z8cqqsjlrlbih9gib82d4"; depends=[ggplot2 reshape2 shiny]; }; Fstability = derive2 { name="Fstability"; version="0.1.2"; sha256="0kscdmrs5namvhi112b47c811w0bg9s3xg48mfa566pxwxz1nv45"; depends=[]; }; - FunChisq = derive2 { name="FunChisq"; version="2.4.9.1"; sha256="1yfpd6hccymx4s59d1yyz7c4fd478rxsimdkwkyg8cw12qq93nfl"; depends=[BH Rcpp]; }; + FunChisq = derive2 { name="FunChisq"; version="2.4.9.2"; sha256="1ap8319kfp6kixnj5qyjkxjwr8g5q0wdr10vng6ppjym8p8c6srn"; depends=[BH Rcpp Rdpack]; }; FunCluster = derive2 { name="FunCluster"; version="1.09"; sha256="0i73asn1w4s6ydf2ddn5wpr0mwbbxzgmaly1pslarzkx71wk03fz"; depends=[cluster Hmisc]; }; FuncMap = derive2 { name="FuncMap"; version="1.0.10"; sha256="0iaay6qz9a2s77xjfpp7wm37y7xwnvmlw6s5k5riccmqzc6dcjs7"; depends=[mvbutils]; }; - FunctionalNetworks = derive2 { name="FunctionalNetworks"; version="1.0.0"; sha256="071hjgiccbrf1gxrh7niw2w1p6vgc77qvrildi59xhk53qcwzqdp"; depends=[Biobase breastCancerVDX]; }; - FunnelPlotR = derive2 { name="FunnelPlotR"; version="0.2.2"; sha256="04i6h1s2p5pdm7g5q2ljrd6ix0hr8n47mczh9jf7c4bhap05zxqj"; depends=[dplyr ggplot2 ggrepel rlang scales]; }; + FunnelPlotR = derive2 { name="FunnelPlotR"; version="0.2.3"; sha256="16bw1fx2pzmxm8gavq791drnpsczxq5yyfbnl2h1xcrzlw4fw4b0"; depends=[dplyr ggplot2 ggrepel rlang scales]; }; FusionLearn = derive2 { name="FusionLearn"; version="0.1.1"; sha256="0n8bj7k2r2vf0v2nsw31k75hzkqj5l4hyfnmvid102hx9cl8hv3y"; depends=[]; }; Fuzzy_p_value = derive2 { name="Fuzzy.p.value"; version="1.1"; sha256="13h6armh9g57zqxyjqk6mq81jlfqxqrg2sb5p9rrhslka5m01zis"; depends=[FuzzyNumbers]; }; FuzzyAHP = derive2 { name="FuzzyAHP"; version="0.9.5"; sha256="02sx32vlvnr0fzw8rf0f6hiikqn7xp1ibpqzxhxwv8yij2qkiyci"; depends=[MASS]; }; @@ -1505,20 +1515,19 @@ in with self; { GAD = derive2 { name="GAD"; version="1.1.1"; sha256="0lyrw0d7i7yn1wkqlbf3rg3dnijfwsjn3kdbsg19hmvwq6qpsak2"; depends=[matrixStats R_methodsS3]; }; GADAG = derive2 { name="GADAG"; version="0.99.0"; sha256="1ycg48idrq2yrk1fxs16yl5wwg3kbfki8xppmh311rrzf75c6z4g"; depends=[igraph MASS Rcpp RcppArmadillo]; }; GADGET = derive2 { name="GADGET"; version="0.2.0"; sha256="0z259dahki3ci5jskm2qp5q89bkr0wr74h7yxy057airc2m1cm7z"; depends=[DiceKriging DiceOptim lhs pbapply]; }; - GADMTools = derive2 { name="GADMTools"; version="3.7-2"; sha256="0aabbs35wbcchab32phiaajzf5zgiis3qfv4nr5dc0mf0qjgsc6h"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr tidyverse]; }; + GADMTools = derive2 { name="GADMTools"; version="3.8-1"; sha256="02rqpvqawk0y8w20d89cbdbjlmpyvvp826gzzdajqba1wazj6ikx"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr]; }; GAIPE = derive2 { name="GAIPE"; version="1.0"; sha256="04iarbwxrhn48bk329wxis7ifzndi67kpjx6dcakawkh3g2mzsfz"; depends=[]; }; GAMBoost = derive2 { name="GAMBoost"; version="1.2-3"; sha256="0450h9zf12r524lxk1lrv9imvvkk6fmyd3chnxp18nnvys7215pv"; depends=[Matrix]; }; GAMens = derive2 { name="GAMens"; version="1.2.1"; sha256="1z10wxcg277fra2lch464l0kb02lspw9qr1i2wmq11wcz0k9qnl8"; depends=[caTools gam mlbench]; }; GANPA = derive2 { name="GANPA"; version="1.0"; sha256="0ia8djv46jm397nxjrm9yc5gacf1r4z0ckiliz57cbrqwh7z2wpa"; depends=[GANPAdata]; }; GANPAdata = derive2 { name="GANPAdata"; version="1.0"; sha256="0mhdadl7zgsacn59ym42magg3214k1xhabwn78fv7kgccszcgc86"; depends=[]; }; - GAS = derive2 { name="GAS"; version="0.3.0"; sha256="0qyawq0chwj5xvzczn5vsakis9qdvwjdx3xdfjl5k233rk2hs7nk"; depends=[cubature MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; }; GAabbreviate = derive2 { name="GAabbreviate"; version="1.3"; sha256="0cq6bg3w0ji44rsz1p4j17fk0jg8rafbjixwi3fjdndc3yd874r5"; depends=[GA psych]; }; GAparsimony = derive2 { name="GAparsimony"; version="0.9.4"; sha256="1p1s5q1basy9v3jy1qxpx5g8mzpkwdfarxmmf7s06c6wq0dl9vp8"; depends=[foreach iterators]; }; GB2 = derive2 { name="GB2"; version="2.1"; sha256="06rcck97pdm1rsb02cy0jd9fknv0mz5jwk364gsaahdk56ddk18a"; depends=[cubature hypergeo laeken numDeriv survey]; }; GB2group = derive2 { name="GB2group"; version="0.2.0"; sha256="185am9j88f3qjv0h8ag91x8qrck4qk0a4k0mcg5k56rf2lf7s7zi"; depends=[GB2 ineq minpack_lm numDeriv]; }; GBJ = derive2 { name="GBJ"; version="0.5.3"; sha256="12lsddkcxz37hn2fvjq158wb1bc6b3hx6wj8q8nj21zpmyl3n2qh"; depends=[BH mvtnorm Rcpp SKAT]; }; GCAI_bias = derive2 { name="GCAI.bias"; version="1.0"; sha256="10092mwpmfbcga0n39a0i6g8xxch8xiwg15cckipw6yxjyx0sivc"; depends=[]; }; - GCD = derive2 { name="GCD"; version="4.0.5"; sha256="1hinn8l2kppl0nysx5baz9am0avwdqfnspx2i8wj60w1ns41v5r8"; depends=[]; }; + GCD = derive2 { name="GCD"; version="4.0.6"; sha256="1lc2n9avg1rfh55gbj3q0yd1gvfw60088zg279s7aikx10zv4sx7"; depends=[raster]; }; GCPM = derive2 { name="GCPM"; version="1.2.2"; sha256="0k2ng78bk3bxpj6nz80j5cvjd56zjz328ga68vyyc3hvdjgpspqj"; depends=[Rcpp RcppProgress]; }; GCalcium = derive2 { name="GCalcium"; version="1.0.0"; sha256="0r84qmdsqsgpaqr08imh48mdvy26s2b62hi0hxxwhr9kg7qvj0rd"; depends=[caTools dplyr]; }; GCalignR = derive2 { name="GCalignR"; version="1.0.2"; sha256="1x0as6mmapvn3a28c3qk3wd5gjkx17xgf9c7yb68wp3lj8pknsnm"; depends=[ggplot2 pbapply readr reshape2 stringr]; }; @@ -1526,19 +1535,18 @@ in with self; { GDAdata = derive2 { name="GDAdata"; version="0.93"; sha256="13ks97i289rc4i7gpqrifwbj0m9rx8csjhnfg8mad10qmjwz7p8b"; depends=[]; }; GDAtools = derive2 { name="GDAtools"; version="1.4"; sha256="1i5g7gzl3fkhwxqizqwrn8098s5lrr0mk17wmpyf92s1sy315cpv"; depends=[FactoMineR nleqslv nnet]; }; GDELTtools = derive2 { name="GDELTtools"; version="1.2"; sha256="1rx6kjh7kmyycqapvbizcxkcfp09qvqv7k8f25v333sxkacpz6p5"; depends=[plyr TimeWarp]; }; - GDINA = derive2 { name="GDINA"; version="2.7.8"; sha256="1aj2ssd7vpszl7p22srkkkpx4a7gkc38vrv3bq7j1zr32096y4zj"; depends=[alabama ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp shiny shinydashboard]; }; + GDINA = derive2 { name="GDINA"; version="2.7.9"; sha256="13pmj069r04h38hg61ibyn1ab15zdy9m0qv60vi25ahgsmg6ccvx"; depends=[alabama ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp shiny shinydashboard]; }; GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; }; GEEmediate = derive2 { name="GEEmediate"; version="1.1.3"; sha256="1xprkpjp1pkq4ci1n32d3yy80hx3r4xf2j7f6hv7dvsn4cvdp417"; depends=[gee]; }; GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.18"; sha256="17m58i3jridgxzcckcm0ydd2ijw3zjvg9w4an8j5jbnr62hmcb2s"; depends=[changepoint GENEAread MASS rpart signal]; }; GENEAread = derive2 { name="GENEAread"; version="2.0.8"; sha256="1phiwdq05h92vlrjbvx4xvazzls5bdlnwfxn5mghx0v9j0n3ahrm"; depends=[bitops mmap]; }; GENEAsphere = derive2 { name="GENEAsphere"; version="1.5.1"; sha256="1kgj7i9v2yn0b8lvvsf0nc6lg3i2syrcygwa51pcrzp57vv7hxn5"; depends=[GENEAread ggplot2 MASS misc3d rgl]; }; - GENLIB = derive2 { name="GENLIB"; version="1.0.6"; sha256="0xyq3ggi814vi3x5kxffhi7ygvzcfj3pg0kfi7whcjpi3pjg05h8"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; + GENLIB = derive2 { name="GENLIB"; version="1.0.7"; sha256="1l3izdxsin3q81a4wwhxd2jyj96z2bcrqz536nyp269l1563cqqa"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; GENMETA = derive2 { name="GENMETA"; version="0.1"; sha256="1mxwqnbg5bvx1qg62xcd62dl81k11l64yckhl3v854asnaczq3pp"; depends=[magic MASS Matrix]; }; GEOmap = derive2 { name="GEOmap"; version="2.4-4"; sha256="0wk2v0fwcwcm59k711fg829h2w58wkd36im4mg974iai6mqif7qh"; depends=[fields MBA RPMG splancs]; }; - GERGM = derive2 { name="GERGM"; version="0.13.0"; sha256="1h3fzkgc553bvxhcmvmlgk9sdais186h4gs1qagdihwpwn8ymbjk"; depends=[BH coda ggplot2 igraph matrixcalc plyr Rcpp RcppArmadillo RcppParallel scales slackr stringr vegan]; }; GESE = derive2 { name="GESE"; version="2.0.1"; sha256="0h3s2sbnv5wilr2mj6bnl2892p16pxrs341gg6jql1a540p669sk"; depends=[kinship2]; }; GESTr = derive2 { name="GESTr"; version="0.1"; sha256="1q12l2vcq6bcyybnknrmfbm6rpzcmxgq2vyj33xwhkmm9g2ii9k6"; depends=[gtools mclust]; }; - GET = derive2 { name="GET"; version="0.1-4"; sha256="1zn0jsl77xslf3rkm1py709jhqd3ciyyhiwph6d9ih2nkla9ivak"; depends=[ggplot2 gridExtra gstat plyr sp spatstat]; }; + GET = derive2 { name="GET"; version="0.1-6"; sha256="1di2vc6fgbchws6haz7jn840g1pvvy6xlkgjisjp7n312i5mz1fd"; depends=[ggplot2 gridExtra gstat plyr sp spatstat]; }; GEVStableGarch = derive2 { name="GEVStableGarch"; version="1.1"; sha256="1iypv0k4cbvsdyglgvf7y52sqvl5qcin627pjqwq42kisqynm8d7"; depends=[fExtremes fGarch Rsolnp skewt stabledist timeDate timeSeries]; }; GEVcdn = derive2 { name="GEVcdn"; version="1.1.6"; sha256="09lzhh16r1hsxa23jkq716yf3x9ap6fkkrz3ij2x83rvwznj8hb3"; depends=[VGAM]; }; GEint = derive2 { name="GEint"; version="0.1.5"; sha256="179gpq4qjhgx1fhyjdb80rf2ip80zhhfyn8xjgwq1a425163q1y7"; depends=[bindata geepack mvtnorm nleqslv pracma rje speedglm]; }; @@ -1561,9 +1569,9 @@ in with self; { GIFTr = derive2 { name="GIFTr"; version="0.1.0"; sha256="101vr2qasky8hnxp5i3lhlnymwzciypqwvhpl6mrr0r0czgpcz2f"; depends=[glue stringr]; }; GIGrvg = derive2 { name="GIGrvg"; version="0.5"; sha256="0mx4n4kf34343yiww80fw5yy0x624xsj71n8fr4dm0a2338pxq8v"; depends=[]; }; GISTools = derive2 { name="GISTools"; version="0.7-4"; sha256="06alb5d2k4qj344i9cpgm3lz9m68rkmjqfx5k2hzn7z458xjrlxs"; depends=[maptools MASS RColorBrewer rgeos sp]; }; - GJRM = derive2 { name="GJRM"; version="0.2-1"; sha256="12kbd8nd43fi4vwjc9qpjwcndwx9zq19w0adqxivmlvxhflh93mb"; depends=[copula distrEx evd gamlss_dist ggplot2 ismev magic matrixcalc matrixStats mgcv mnormt numDeriv psych Rmpfr scam survey survival trust trustOptim VGAM VineCopula]; }; + GJRM = derive2 { name="GJRM"; version="0.2-2"; sha256="0hwa3nnlk3q810x5gyx9la090vn8fysm9rdv2gg80j8jifzhs48h"; depends=[copula distrEx evd gamlss_dist ggplot2 ismev magic matrixcalc matrixStats mgcv mnormt numDeriv psych Rmpfr scam survey survival trust trustOptim VGAM VineCopula]; }; GK2011 = derive2 { name="GK2011"; version="0.1.3"; sha256="13vafhbgcsj485f12qv962y07v3hil3pla51vkl2b030amzy86jv"; depends=[]; }; - GLDEX = derive2 { name="GLDEX"; version="2.0.0.6"; sha256="0s8nahy2mdmqlp8z5zsa3mvynwikrna8ks6xj6g2v4j64qd19p09"; depends=[cluster]; }; + GLDEX = derive2 { name="GLDEX"; version="2.0.0.7"; sha256="1w5ahwbnz9xsn3rdxzcxxvc6m5cgq46nln3i5v8vp4imrs8aafb3"; depends=[cluster]; }; GLDreg = derive2 { name="GLDreg"; version="1.0.7"; sha256="1wjrr4x1k0fz8nx9idb4ysamldypriiypj96b5v028lx38jwsk3l"; depends=[ddst GLDEX]; }; GLIDE = derive2 { name="GLIDE"; version="1.0.2"; sha256="1z5h8br6aig24g5gsh8h6npm269id3h5gjjyf5avs4v08b51rpcv"; depends=[doParallel foreach MASS]; }; GLMMRR = derive2 { name="GLMMRR"; version="0.2.0"; sha256="0s3jfh720acfmbadilq2c6gql3yifsbijpmw1jkzbsdc87pqi1db"; depends=[lattice lme4]; }; @@ -1579,8 +1587,8 @@ in with self; { GMDHreg = derive2 { name="GMDHreg"; version="0.2.0"; sha256="07qk9jbav9gm3gh3ag7nz273iab5zlkn0yz31zs2hw646ik1yn14"; depends=[]; }; GMKMcharlie = derive2 { name="GMKMcharlie"; version="1.0.3"; sha256="1ncz3czjg1md1hfahc2403k33nby11ldlq0yixpjs4s8panwpgsb"; depends=[Rcpp RcppArmadillo RcppParallel]; }; GMMAT = derive2 { name="GMMAT"; version="1.1.2"; sha256="1xifcm6kv4v3hw4zskggifd16cn1v7cmnwsgwjfbgrgz3qvyac5c"; depends=[CompQuadForm foreach Matrix Rcpp RcppArmadillo SeqArray SeqVarTools]; }; - GMMBoost = derive2 { name="GMMBoost"; version="1.1.2"; sha256="01q165vkdiv4qh96lha0g2g94jpnzdclbby6q43ghh9j1yrd4qzj"; depends=[magic minqa]; }; - GMSE = derive2 { name="GMSE"; version="0.4.0.11"; sha256="1by65202swxcj453q3frac02b2lwny1mm1i95vcjhkqihqkffl2z"; depends=[shiny shinydashboard shinyjs]; }; + GMMBoost = derive2 { name="GMMBoost"; version="1.1.3"; sha256="0p9jnwjc8g83qsxkjz9lhaip1hkpdg6n4fdpz34b96vb7qhzrrqc"; depends=[magic minqa]; }; + GMSE = derive2 { name="GMSE"; version="0.4.0.13"; sha256="0xvdm0q7ghw6hr26134m0g33wfclwf7q9rdrlkkyb6mnzasqdfgs"; depends=[shiny shinydashboard shinyjs]; }; GMSimpute = derive2 { name="GMSimpute"; version="0.0.1.0"; sha256="1hmn5ss81df9j9ibgibs95j98irqzif94vq0c861mq4a65y59fcp"; depends=[ggplot2 glmnet reshape2]; }; GNAR = derive2 { name="GNAR"; version="1.0"; sha256="0iv82f118b54g09dc5ggr2z793dgjhxj22v05kypz5fnbdxcl5qf"; depends=[igraph wordcloud]; }; GNE = derive2 { name="GNE"; version="0.99-3"; sha256="11pk9w4xj27dyfn05bna99xqdb89wp0ljl798d5dyk5fcnhh7217"; depends=[alabama BB nleqslv SQUAREM]; }; @@ -1593,16 +1601,19 @@ in with self; { GPCSIV = derive2 { name="GPCSIV"; version="0.1.0"; sha256="118l792mwd54xsi3g8afg3vc6wds8j6fyaz3mwmq04mlcyblym4l"; depends=[scatterplot3d sqldf]; }; GPFDA = derive2 { name="GPFDA"; version="2.2"; sha256="1xqk03g8b8hi1vdqh6a9wml8ln0ad6lmy14z8k8c4wdc5kbzdr0b"; depends=[fda fda_usc MASS spam]; }; GPGame = derive2 { name="GPGame"; version="1.1.0"; sha256="00qiqd7p84k22wbmlmj8a81fy5m5rl6afhj2q61j0akicnbzjfw9"; depends=[DiceDesign DiceKriging GPareto KrigInv MASS mnormt mvtnorm Rcpp]; }; + GPL2025 = derive2 { name="GPL2025"; version="1.0.1"; sha256="0af42g3v91fbcmla2yq98v8rd4ifaznb1xvw7ny41r3843d8appc"; depends=[dplyr]; }; GPLTR = derive2 { name="GPLTR"; version="1.2"; sha256="0b4s090jlp2qpqqr0b1ifwyf2fal156y7vg9mjkw53y623ms5pix"; depends=[rpart]; }; GPM = derive2 { name="GPM"; version="3.0.1"; sha256="01vd68w5pnwhng83x5i0k9c5fhsn9siyzzndkvkmpis4mjm42sgv"; depends=[doParallel foreach iterators lattice lhs pracma randtoolbox Rcpp RcppArmadillo]; }; GPRMortality = derive2 { name="GPRMortality"; version="0.1.0"; sha256="0k5pfyl7r5vsac927aqx19lz93vyk5l3ydqkazn2hwwaw1lh2wav"; depends=[rstan]; }; GPSCDF = derive2 { name="GPSCDF"; version="0.1.1"; sha256="1l50a6p81lykiqlqiwb6kix5s6wzwdi8vddqhl418dlwlsh83ybf"; depends=[dplyr MASS nbpMatching nnet survival]; }; GPareto = derive2 { name="GPareto"; version="1.1.4"; sha256="1awacgvss2n9r6s7dydgkg05rj328si830rj97fj900qmlv5gg1p"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud rgl]; }; GPfit = derive2 { name="GPfit"; version="1.0-8"; sha256="05mpiyi2vxv0wqp422n1mnxa8msc4daq40cwpnpngbcwqhlgqkby"; depends=[lattice lhs]; }; - GPoM = derive2 { name="GPoM"; version="1.2"; sha256="1hhwdpish8j3j9y5q6r5pdsl1kpbwp1hjhcq24iiz4lfssib4k9f"; depends=[deSolve rgl]; }; + GPoM = derive2 { name="GPoM"; version="1.3"; sha256="1c870dfbpswx78n4s1v6zy0l1qknrs9335af0z01v1miyrmi95gd"; depends=[deSolve float rgl]; }; GPoM_FDLyapu = derive2 { name="GPoM.FDLyapu"; version="1.0"; sha256="1hpgiwh7b50gazp1msjsh2840b91wfrxhl2l45lxg6jr1m34q8pj"; depends=[deSolve GPoM]; }; GPrank = derive2 { name="GPrank"; version="0.1.4"; sha256="06j5fk427jkp5lphqlx48vfp4fagnxxnv4iyjcha8nvkswcblwgy"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; GPvam = derive2 { name="GPvam"; version="3.0-5"; sha256="0inhhx5ll4ybkwp71ijigxlyxsa0rdyxb38kgfgxb588dsk4scjz"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; + GRANBase = derive2 { name="GRANBase"; version="2.6.20"; sha256="0z9378qimdpxrslib2avimik3xqd41angfg12j8vmcbg7zh3binh"; depends=[covr desc dplyr GRANCore htmlTable jsonlite markdown RCurl sendmailR stringi switchr]; }; + GRANCore = derive2 { name="GRANCore"; version="0.2.7"; sha256="0xnm7jb2s4ag4qvsfs1fq0f2ikvfqm3bvxhj8kmmxwynwl5pw287"; depends=[switchr]; }; GRAPE = derive2 { name="GRAPE"; version="0.1.1"; sha256="1jzvf45ch8x8f2x9kmvv02xz9bix5vplh8143vc4m1yyq42x09c6"; depends=[]; }; GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; }; GROAN = derive2 { name="GROAN"; version="1.2.0"; sha256="14n3k1wwz5pn82wcj00cdns4bp699f58k1nj8hp8jn0q7xr2sgv5"; depends=[plyr rrBLUP]; }; @@ -1625,15 +1636,14 @@ in with self; { GUIDE = derive2 { name="GUIDE"; version="1.2.7"; sha256="0klaczmn3jnlzyh45yaqlc897irjfk467f4w03awmflaiwan3h6v"; depends=[rpanel tkrplot]; }; GUILDS = derive2 { name="GUILDS"; version="1.3"; sha256="0zl6x0vn93ybps63fqazvd93f2zwdq0rqqrp7d6n5rnamx99mm8d"; depends=[pracma Rcpp]; }; GUIProfiler = derive2 { name="GUIProfiler"; version="2.0.1"; sha256="10m4d7f2rhw6cmkrnw3jh4iqlkfphf4v7mpfwzw17laq0ncmsx5r"; depends=[graph MASS Nozzle_R1 proftools Rgraphviz rstudioapi]; }; - GUIgems = derive2 { name="GUIgems"; version="0.1"; sha256="0lmx8hw0496vk437p32l933cdb4vpi94f4kz58x20jj07c20maz6"; depends=[ggplot2 igraph MASS msm plyr rpanel stringr]; }; GUTS = derive2 { name="GUTS"; version="1.1.1"; sha256="05njlykhxs62k5cjrfwgbqyckbvf2jxjshg3avf6vhwwf58qyjq9"; depends=[Rcpp]; }; GUniFrac = derive2 { name="GUniFrac"; version="1.1"; sha256="1vgij7c9b0afl5wzwcn0pjdvn8gqz2jxk5q0gchd9zk1qd10a1vl"; depends=[ape matrixStats vegan]; }; - GVARX = derive2 { name="GVARX"; version="1.2"; sha256="1syd2266i4v4xmz22g455y63sbk9jdzz7ni0rlhdvhsmn4pb2d53"; depends=[lmtest lubridate sandwich strucchange tsDyn urca vars xts]; }; + GVARX = derive2 { name="GVARX"; version="1.3"; sha256="00iqwkshp1i9338x9khh8hyszad6150qb11jlvky5fm488wcw1y3"; depends=[lmtest lubridate sandwich strucchange tsDyn urca vars xts]; }; GWAF = derive2 { name="GWAF"; version="2.2"; sha256="11lk1dy24y1d0biihy2aypdvlx569lw1pfjs51m54rhgpwzkw6yd"; depends=[coxme geepack lme4]; }; GWASExactHW = derive2 { name="GWASExactHW"; version="1.01"; sha256="19qmk8h7kxmn9kzw0x4xns5p3qqz27xkqq4q6zmh4jzizd0fsl78"; depends=[]; }; GWASbyCluster = derive2 { name="GWASbyCluster"; version="0.1.7"; sha256="0ivlkxbh8m23vbnjfmhk0vfczd5b8lzy9w4gm1m6jpvdm40kn70x"; depends=[Biobase limma rootSolve snpStats]; }; GWASinlps = derive2 { name="GWASinlps"; version="1.2"; sha256="036lv8f58kz6qdwaviyk1q1qsgcj9cimipq1cjrfpn8snkn7s1gh"; depends=[horseshoe mombf speedglm]; }; - GWASinspector = derive2 { name="GWASinspector"; version="1.4.2"; sha256="1xqrvgm2spwkyhrn215j5b2m6lc6hck9zkrmggbyyqakv04w507d"; depends=[data_table futile_logger ggplot2 gridExtra hash ini kableExtra knitr rmarkdown RSQLite]; }; + GWASinspector = derive2 { name="GWASinspector"; version="1.4.5"; sha256="1y2wg7nrz7q5240bmcz88pgzykmkq8hjxq452lfgwajvk0dr67k5"; depends=[data_table futile_logger ggplot2 gridExtra hash ini kableExtra knitr rmarkdown RSQLite]; }; GWEX = derive2 { name="GWEX"; version="1.0.2"; sha256="0iykciifbskcrx1qv4874nxli1sq6nbmlfinq4ksir3p93y7ds87"; depends=[abind doParallel EnvStats fGarch foreach lmomco MASS mvtnorm nleqslv Renext]; }; GWG = derive2 { name="GWG"; version="1.0"; sha256="1va0cd229dhhi1lmrkpwapcm96hrdmxilrmba02xnl7ikhisw0my"; depends=[]; }; GWLelast = derive2 { name="GWLelast"; version="1.2.2"; sha256="1nm4w5m4ca6npmpvh9nb0cnrbzlyv95nvvhgs3pqcrw4igagm4hj"; depends=[doParallel foreach geosphere glmnet sp spgwr]; }; @@ -1647,10 +1657,9 @@ in with self; { GauPro = derive2 { name="GauPro"; version="0.2.2"; sha256="127agnhqbbavcf7sx0zq1c8ldh3w1d1iz5bpd1ixxkyaapmiq4qy"; depends=[lbfgs R6 Rcpp RcppArmadillo]; }; GaussianHMM1d = derive2 { name="GaussianHMM1d"; version="1.0.1"; sha256="1j1cwh0p7czy2l4qf6nymqcp8kkfaki0j2rj8p99nqn2vgc3vcax"; depends=[doParallel foreach]; }; GeDS = derive2 { name="GeDS"; version="0.1.3"; sha256="1ddq4hnyl3m3s4cchccxiqphi742ljcm86zqpa01a5nrjbnr87x6"; depends=[Matrix Rcpp Rmpfr]; }; - GeNetIt = derive2 { name="GeNetIt"; version="0.1-2"; sha256="0frrbakgnng52fvf912rywmcay2ncc01akb6jw9hlixn2qjr0rr1"; depends=[nlme raster rgeos sp spatialEco spdep velox]; }; GenAlgo = derive2 { name="GenAlgo"; version="2.1.5"; sha256="0d3y9kc2njsbzdngv67d4qrdsnn7nsxph5acc09vmwxpv1cyhxiw"; depends=[ClassDiscovery MASS oompaBase]; }; GenBinomApps = derive2 { name="GenBinomApps"; version="1.0-2"; sha256="1ps1rq8cjlwh658mysdh3xbn5fihanzcwxb38xvg4031vnwv80in"; depends=[]; }; - GenEst = derive2 { name="GenEst"; version="1.4.0.1"; sha256="14scdz77vm5lfzvjqhhczlyyyv1iwqv9i3pssd5f7f7mw6ig16qd"; depends=[corpus DT gsl gtools hellno htmltools lubridate matrixStats mvtnorm Rcpp shiny shinyjs sticky survival]; }; + GenEst = derive2 { name="GenEst"; version="1.4.2"; sha256="0ljw1rlp686j7nkz11pqvmm0swb2ix0pkk5wc0z5hg4xic98vld8"; depends=[corpus DT gsl gtools hellno htmltools htmlwidgets lubridate MASS matrixStats mvtnorm Rcpp shiny shinyjs survival]; }; GenForImp = derive2 { name="GenForImp"; version="1.0"; sha256="1wcvi52fclcm6kknbjh4r9bpkc2rg8nk6cddnf5j8zqbvrwf4k5x"; depends=[mvtnorm sn]; }; GenKern = derive2 { name="GenKern"; version="1.2-60"; sha256="12qmd9ydizl7h178ndn25i4xscjnrssl5k7bifwv94m0wrgj4x6c"; depends=[KernSmooth]; }; GenOrd = derive2 { name="GenOrd"; version="1.4.0"; sha256="17mfrj1fwj8mri1w0bl2pw1rqriidmd67i7gpn9v56g9dzw5rzms"; depends=[MASS Matrix mvtnorm]; }; @@ -1661,28 +1670,28 @@ in with self; { GeneClusterNet = derive2 { name="GeneClusterNet"; version="1.0.1"; sha256="1xi4c041c4m39f9wb5fklgmhi6ng78iwzzqch5xk9hx5blq6zd4m"; depends=[G1DBN igraph MASS]; }; GeneCycle = derive2 { name="GeneCycle"; version="1.1.4"; sha256="0pivwfjz1plfhwz7k2c33k6p0pa1014d80qsrk8ig9yqqqlyhy1z"; depends=[fdrtool longitudinal MASS]; }; GeneF = derive2 { name="GeneF"; version="1.0"; sha256="0bizf47944b2zv9ayxb9rhrqx0ilz2xlvkw7x5vbg7l67y2g2l4d"; depends=[]; }; - GeneNet = derive2 { name="GeneNet"; version="1.2.13"; sha256="0w52apk0nnr8nsskf26ff7ana8xiksr8wqmkjxzwhzgg7fncm61p"; depends=[corpcor fdrtool longitudinal]; }; + GeneNet = derive2 { name="GeneNet"; version="1.2.14"; sha256="0cdhrj15rz0w0pyw3r8mikrzsdh95y5i1c0pa3cn0c2bjnjx3x3n"; depends=[corpcor fdrtool longitudinal]; }; GeneralOaxaca = derive2 { name="GeneralOaxaca"; version="1.0"; sha256="19j5c5xr6mdb6pmih94wbjas4yh0dmsqfggg8clvdxkpwk0h338v"; depends=[boot]; }; GeneralisedCovarianceMeasure = derive2 { name="GeneralisedCovarianceMeasure"; version="0.1.0"; sha256="02s1wbsdp5ma4pnmcsdl5dwm156zx12d3n1ypzkc33lxg21ashzj"; depends=[CVST kernlab mgcv xgboost]; }; GeneralizedHyperbolic = derive2 { name="GeneralizedHyperbolic"; version="0.8-4"; sha256="01gqfvmzfslhxdnigzbl3rd55hk6r0kgd8fm9xjl0kb9vmb735lm"; depends=[DistributionUtils MASS]; }; - GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="1.1.6"; sha256="1s0bn3y0s541v4wzh7rh82cakxcx3i6aff6x1g9m7jan5q9c1gac"; depends=[ggplot2 Rcpp RcppArmadillo]; }; + GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="1.1.8"; sha256="01sx1vkkpnfhzb95lnc8ccc4hflq9hjl90f5mxndmdam44k05b51"; depends=[ggplot2 Rcpp RcppArmadillo]; }; GeneticSubsetter = derive2 { name="GeneticSubsetter"; version="0.8"; sha256="0bd4snv3dwabc7mknmd2rjmffj67xq535x0bycajhd83d1jhjars"; depends=[]; }; GenoScan = derive2 { name="GenoScan"; version="0.1"; sha256="0p98imfvvz7l94kim3pxypyjs2pbxng4a2nagbafbady82ylr2vi"; depends=[data_table MASS Matrix seqminer SKAT]; }; GenomicMating = derive2 { name="GenomicMating"; version="2.0"; sha256="02v1pkarmardf7g8hf2n4jj4cq4707g5lcc7gnwsiyyh7pknd1y6"; depends=[dplyr emoa kohonen LowRankQP magrittr plotly qtl Rcpp RcppArmadillo scatterplot3d SOMbrero]; }; - GenomicTools = derive2 { name="GenomicTools"; version="0.2.8"; sha256="060i014x2d7588vl7k0s66hphk23c1y7svcpv58lwwpal96v5cm0"; depends=[circlize data_table GenomicTools_fileHandler gMWT Rcpp RcppArmadillo snpStats stringr]; }; - GenomicTools_fileHandler = derive2 { name="GenomicTools.fileHandler"; version="0.1.4"; sha256="10g47rbqrnfa47fj2g45m79zrxx56fk2z9abzch91m134xhi8qja"; depends=[data_table snpStats]; }; + GenomicTools = derive2 { name="GenomicTools"; version="0.2.9.7"; sha256="196shxbrcgiwaa7aav2aipsbj1smrkbhinn44aw9qfvz2x9zdz0m"; depends=[circlize data_table GenomicTools_fileHandler gMWT Rcpp RcppArmadillo snpStats stringr]; }; + GenomicTools_fileHandler = derive2 { name="GenomicTools.fileHandler"; version="0.1.5.9"; sha256="09l87wf78bj49cdh7r3x81hn15c4pihxih8l59xxrpgdhp69268c"; depends=[data_table snpStats]; }; GeoBoxplot = derive2 { name="GeoBoxplot"; version="1.0"; sha256="164dh49ac3fx38fdglv32lmz92ca8jdd98cbhz6mxsk8r0jcladw"; depends=[]; }; GeoDE = derive2 { name="GeoDE"; version="1.0"; sha256="0wawkzj0344pprm8g884d7by8v74iw96b109rgm7anal48fl30im"; depends=[MASS Matrix]; }; GeoLight = derive2 { name="GeoLight"; version="2.0.0"; sha256="1i49hyj3f5rcw0s6j2csnfwc6mnp5zn44vxjnk05wdkpw6dpvx5i"; depends=[changepoint fields maps MASS]; }; GeoMongo = derive2 { name="GeoMongo"; version="1.0.1"; sha256="19wim724sgmxx9rd5yvmqdml0hppb92b8qvpl5zqrlnzxzm0ih5x"; depends=[data_table geojsonR R6 reticulate]; }; GeoRange = derive2 { name="GeoRange"; version="0.1.0"; sha256="0krj9570wkhdvpaqkq3nf0maglqd44mpwn4v1bymvgpk1i1wf5p3"; depends=[moments proj4 raster sp velociraptr]; }; - GeoTcgaData = derive2 { name="GeoTcgaData"; version="0.2.2"; sha256="0ac0wmd9vbridc7ngwyjgzj2n6wd784rv1dqfyxqjx82g2kxmgqh"; depends=[data_table]; }; + GeoTcgaData = derive2 { name="GeoTcgaData"; version="0.2.3"; sha256="0w53ng7q04wxc5ij1svck26liyy82z7vm8y0r19k9cjca0wjxi97"; depends=[data_table]; }; GeomComb = derive2 { name="GeomComb"; version="1.0"; sha256="05xb6m2ciszxd13yhqdkildh9nsq19ss8885ngj6ynvbchqkii7r"; depends=[forecast ForecastCombinations ggplot2 Matrix mtsdi psych]; }; - GerminaR = derive2 { name="GerminaR"; version="1.3"; sha256="1q52rp0xvs2mmc4mr7dx1zq78xags5j7kdgj8h05m8qh8dfhzvqf"; depends=[agricolae assertthat dplyr DT ggplot2 gsheet gtools magrittr readxl shiny shinydashboard tibble tidyr]; }; + GerminaR = derive2 { name="GerminaR"; version="1.4"; sha256="0dj645dziwr5l1zg9pskwc8a0pmbfidqskqxg3bvx7xqgfdjcx4c"; depends=[agricolae assertthat dplyr DT ggplot2 gsheet gtools magrittr purrr readxl shiny shinydashboard tibble tidyr]; }; GetBCBData = derive2 { name="GetBCBData"; version="0.5"; sha256="1i5b5sawa8ngjp1afm1grm9hbmkhd5pcwqagkamlihsrmsvcdffn"; depends=[curl dplyr furrr future jsonlite lubridate memoise purrr RCurl readr stringr]; }; GetDFPData = derive2 { name="GetDFPData"; version="1.5.2"; sha256="1xa1dy1lm4v2lch3qmfa990bx8r1qzch7jkpnydlnzmd0qmcbvb4"; depends=[curl dplyr lubridate readr reshape2 stringr tibble xlsx XML]; }; GetHFData = derive2 { name="GetHFData"; version="1.7"; sha256="05xmr880n6arvpn6lb51yn9qssc8594rsxp6cinshk2jh6hq4fnj"; depends=[curl dplyr lubridate RCurl readr stringr]; }; - GetLattesData = derive2 { name="GetLattesData"; version="1.3.1"; sha256="1rq89110qgfi9v47pqahrzzcmh26r1724sgb8bbccsrydfscf994"; depends=[curl dplyr readr stringdist stringr XML]; }; + GetLattesData = derive2 { name="GetLattesData"; version="1.4"; sha256="129hnhmw8aw81whyj3g7npwgmg4fmvsji9h2xfg78nrp0abjxijv"; depends=[curl dplyr readr stringdist stringr XML]; }; GetQuandlData = derive2 { name="GetQuandlData"; version="0.1.0"; sha256="1g1as4m853ab1wp57rzqm0552g0vm7kxzypibv0xywc85084pnmc"; depends=[dplyr jsonlite memoise purrr readr scales stringr]; }; GetR = derive2 { name="GetR"; version="0.1"; sha256="1b2wirhz4nhvmf863czwb8z8b42ilsyjjrg9rc4nd9b7nz50bmjg"; depends=[party]; }; GetTDData = derive2 { name="GetTDData"; version="1.4.2"; sha256="1qz75hq1c89riq0jpzjkr9gbk5y7894kb0ydhdyji7kjl1kvgyvx"; depends=[bizdays curl RCurl readxl rvest stringi stringr tidyr XML xml2]; }; @@ -1693,19 +1702,18 @@ in with self; { GibbsACOV = derive2 { name="GibbsACOV"; version="1.1"; sha256="1ikcdsf72sn1zgk527zmxw3zjhx0yvkal6dv001cgkv202842kll"; depends=[MASS]; }; Gifi = derive2 { name="Gifi"; version="0.3-9"; sha256="0rwyj60cldf3k118cnc5px16dc5p5bfxgl0w2m1lh6rsqlmza25a"; depends=[colorspace]; }; GillespieSSA = derive2 { name="GillespieSSA"; version="0.6.1"; sha256="0li0jqnbl9rfj8gbspq7fv327fii53rh93ffsxpic7804rmrnbi7"; depends=[]; }; - GillespieSSA2 = derive2 { name="GillespieSSA2"; version="0.2.5"; sha256="1mswjy9fvrgn5353w1mnkmbr98bn1jdinsyc50ygy42z7sd4ijp2"; depends=[assertthat dplyr dynutils Matrix purrr Rcpp RcppXPtrUtils readr rlang stringr tidyr]; }; + GillespieSSA2 = derive2 { name="GillespieSSA2"; version="0.2.6.1"; sha256="0nm9mdy537d2kza7x4bl6mvawgqpna4cva1xa0n9pcw70cc319nx"; depends=[assertthat dplyr dynutils Matrix purrr Rcpp RcppXPtrUtils readr rlang stringr tidyr]; }; GiniDistance = derive2 { name="GiniDistance"; version="0.1.0"; sha256="0jq1dwpsvh3k25lawvzf9ij72jsspzyqsbnrphz8aqwi1dkm3851"; depends=[energy randomForest Rcpp RcppArmadillo readxl]; }; GiniWegNeg = derive2 { name="GiniWegNeg"; version="1.0.1"; sha256="1wqwjalsyp55si839cil6na3khigm0mwn6qkg0kjylq10pabfk2a"; depends=[]; }; - GlmSimulatoR = derive2 { name="GlmSimulatoR"; version="0.2"; sha256="1bbxn8y17dk0n497fvfjl84ssn5qnp5kxlmqzzhzs264vvxfbz0l"; depends=[assertthat cplm dplyr ggplot2 magrittr MASS purrr rlang statmod stringr tweedie]; }; + GlmSimulatoR = derive2 { name="GlmSimulatoR"; version="0.2.1"; sha256="04zgjfzi1cbg7p0dv7f499yv9jf66w620kzrvxbx3yb6h5by6xz2"; depends=[assertthat cplm dplyr ggplot2 magrittr MASS purrr rlang statmod stringr tweedie]; }; GlobalDeviance = derive2 { name="GlobalDeviance"; version="0.4"; sha256="0s318arq2kmn8fh0rd5hd1h9wmadr9q8yw8ramsjzvdc41bxqq1a"; depends=[snowfall]; }; GlobalFit = derive2 { name="GlobalFit"; version="1.2"; sha256="01s51nxcsl8xxn6khbv5jsvpwblwf0iamvr477a1rraqqqj94zx0"; depends=[sybil]; }; GlobalOptions = derive2 { name="GlobalOptions"; version="0.1.1"; sha256="0x89hfz80avq4zcskxl71i4zi0mgniqqxfrvz050aa2189wfyja2"; depends=[]; }; - GmAMisc = derive2 { name="GmAMisc"; version="1.0.0"; sha256="14rs13y509hijg4ars3j55fm0133487alm8b9jlffbz8qiln48g4"; depends=[caTools classInt cluster coin corrplot DescTools dismo ggplot2 ggrepel gridExtra Hmisc InPosition kimisc lsr maptools plyr pROC raster RcmdrMisc rgdal rgeos rworldmap shape sp spatialEco spatstat]; }; - Gmedian = derive2 { name="Gmedian"; version="1.2.4"; sha256="0lr1hwprqy9mq5qyp83qqxj8dh5sy487xkqbv2y1qdinzj62pvcn"; depends=[Rcpp RcppArmadillo robustbase RSpectra]; }; - Gmisc = derive2 { name="Gmisc"; version="1.9.1"; sha256="1gskaaimiq65pl5h4h8cp1cp4klniw7qz80z8zlc5nrkzph8s1md"; depends=[abind checkmate forestplot Hmisc htmlTable knitr lattice magrittr Rcpp rmarkdown stringr XML]; }; + Gmedian = derive2 { name="Gmedian"; version="1.2.5"; sha256="0xx8x4g6wb9djmkx3q1bwwa1vgf10avi6ka3x1jzgsxk6x0jsx0i"; depends=[Rcpp RcppArmadillo robustbase RSpectra]; }; + Gmisc = derive2 { name="Gmisc"; version="1.9.2"; sha256="08wkdaf2dyji7vkc0w4ay0f2pkll3psc1ap4rn7pdvfz2wlgs7c9"; depends=[abind checkmate forestplot Hmisc htmlTable knitr lattice magrittr Rcpp rmarkdown stringr XML]; }; GoFKernel = derive2 { name="GoFKernel"; version="2.1-1"; sha256="0xygsdmggl35fafyp431mkwalwixw2r3f32qll1pf72dfwd8y8d3"; depends=[KernSmooth]; }; - GofKmt = derive2 { name="GofKmt"; version="2.0"; sha256="0018ljzlj7nkf12g0sqa8iyq3j2bnj9la3fwblx9lbdn8nxgllhn"; depends=[Rsolnp]; }; - GoodmanKruskal = derive2 { name="GoodmanKruskal"; version="0.0.2"; sha256="1qwarachkhc2yvjyxfcfbgjc1x9ni5xb7f93zviv8mz3c35bhs3b"; depends=[classInt corrplot]; }; + GofKmt = derive2 { name="GofKmt"; version="2.1.1"; sha256="11dspnx1cljbbwk4xhg1l5vv2c8q24k294c122rdgc2zqp8k2c04"; depends=[ggplot2 Rcpp RcppArmadillo Rsolnp]; }; + GoodmanKruskal = derive2 { name="GoodmanKruskal"; version="0.0.3"; sha256="1d0xkmkcfcwx0qs8m4b9dgrbkg1qpb859mmzg4d1rww8rc0wxh9h"; depends=[classInt corrplot]; }; GoogleKnowledgeGraphR = derive2 { name="GoogleKnowledgeGraphR"; version="0.1.0"; sha256="1jxiq1s48skn43pydsw8s67hf70v9fhhw2drcx9vni3c3szs44qd"; depends=[curl jsonlite]; }; GpGp = derive2 { name="GpGp"; version="0.2.1"; sha256="0sa2xfharyy21mfcxl7hzgmaq3x8iz834mbbcfkqm5qf689i08yj"; depends=[FNN Rcpp RcppArmadillo]; }; Grace = derive2 { name="Grace"; version="0.5.3"; sha256="0r41zvgdd5rqm15axqqssik6plwy7snpgw8m32labkfn3f0pp7n0"; depends=[glmnet MASS scalreg]; }; @@ -1717,7 +1725,7 @@ in with self; { GreedyExperimentalDesign = derive2 { name="GreedyExperimentalDesign"; version="1.2"; sha256="1x3hnyqq75krlygg82qm0ldd8nsv071nzgr63zkjmifc7hgi0nvb"; depends=[GreedyExperimentalDesignJARs rJava]; }; GreedyExperimentalDesignJARs = derive2 { name="GreedyExperimentalDesignJARs"; version="1.0"; sha256="14i6m5qlh1fca9xmzid01hicd3bkf6rzl139ss78gvw544zrapw7"; depends=[rJava]; }; GreedySBTM = derive2 { name="GreedySBTM"; version="1.0"; sha256="1r29cd8nxpyc82rz2xb9mk9wc17gcdlcl9lw1j3y4npr2z0qhf13"; depends=[Rcpp RcppArmadillo]; }; - Greg = derive2 { name="Greg"; version="1.3.2"; sha256="0df91kzhvcj85baz1z3kfih2kv2yvi8is4adpl4kx6nwfd2d3q82"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; + Greg = derive2 { name="Greg"; version="1.3.3"; sha256="1909lpsax1dwblrq0ab52vwz8iik9h8p5w2nmlsrwfwyv8018yha"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; GriegSmith = derive2 { name="GriegSmith"; version="1.0"; sha256="1a7gnaig1wvxpph7d8c37kx51dznzk0457fzf7alw95iwpyb4z7j"; depends=[spatstat]; }; GrimR = derive2 { name="GrimR"; version="0.5"; sha256="005ywc31yn1cs54kjlkrryw0s7zm8dqqfjkdlkm4s1sbc9r3mssz"; depends=[car]; }; GroupComparisons = derive2 { name="GroupComparisons"; version="0.1.0"; sha256="0fxgh1mksrfmd4yjrpxg3nfby5wyx75lj0shb5xrdzl7pxzh56ai"; depends=[car]; }; @@ -1726,7 +1734,7 @@ in with self; { GrpString = derive2 { name="GrpString"; version="0.3.2"; sha256="14ss6assqk6s9kv4bvzlydm8qrbnslm4vj876q5dn2dw4k50dai1"; depends=[cluster plyr Rcpp]; }; GsymPoint = derive2 { name="GsymPoint"; version="1.1.1"; sha256="1fg8vqd86kcpciphmlcxlm0rk01iza7md5y8kcxp9i732n4zn7r8"; depends=[ROCR Rsolnp truncnorm]; }; GuardianR = derive2 { name="GuardianR"; version="0.9"; sha256="0z0bgm3kr7yqx0yfzhs07k1gs97zpjajfnxn1w1m5w76s7czfzl7"; depends=[RCurl RJSONIO]; }; - Guerry = derive2 { name="Guerry"; version="1.6-1"; sha256="1hpp49w2kd1npsd709cwg125pw6mrqxfv2nn3lcs1mg2r49ki2bl"; depends=[]; }; + Guerry = derive2 { name="Guerry"; version="1.7.0"; sha256="0r92xs1ps48yznc146gqmdvz47zvlqfb14yz2ys8bjlk0wna9agv"; depends=[sp]; }; GuessCompx = derive2 { name="GuessCompx"; version="1.0.3"; sha256="1xbkh1wh2z0n964w8lwi7q4rr7mls0awf5k7n5jjklhq4b6gswic"; depends=[boot dplyr ggplot2 lubridate reshape2]; }; GxM = derive2 { name="GxM"; version="1.1"; sha256="02rv8qb46ylk22iqn9cgh63vkyrg9a8nr1d0d3j5hqhi0wyhc41r"; depends=[minqa nlme Rcpp]; }; HAC = derive2 { name="HAC"; version="1.0-6"; sha256="1cdh3s8nm17mfjj0zdxzhlmakcd0m12xfjx0b4gyx24xkahklr8i"; depends=[copula numDeriv]; }; @@ -1744,6 +1752,7 @@ in with self; { HCTR = derive2 { name="HCTR"; version="0.1.1"; sha256="1hg8mpallwxpmamk6q8x87w5hlqqwvbahfw5zmr9pisiagbwcsay"; depends=[glmnet harmonicmeanp MASS ncvreg Rdpack]; }; HCmodelSets = derive2 { name="HCmodelSets"; version="1.1"; sha256="1krcwx6s4fh8ngx81lmdzd12i8k2yczvc4iv9k718xnaji1b8mkd"; depends=[ggplot2 mvtnorm survival]; }; HDCI = derive2 { name="HDCI"; version="1.0-2"; sha256="0wxbv54kbygymhh4r7052vnbj603c1kya01ykvmqzzkjyyfzidkz"; depends=[doParallel foreach glmnet iterators lattice Matrix mvtnorm slam]; }; + HDCurves = derive2 { name="HDCurves"; version="0.1.0"; sha256="1ifcbwcqgdxicqxcqrsl9kp3zadxhijpwff8ln309378vybr3gh1"; depends=[]; }; HDDesign = derive2 { name="HDDesign"; version="1.1"; sha256="1jim4h9bwn8r637va7m81kwwsfwyzs9pzn5a9i7c8xz8b1x191bj"; depends=[]; }; HDGLM = derive2 { name="HDGLM"; version="0.1"; sha256="0a5lnh3780lsczj8339sp97c5y64a2gsdf77i56fvpxpphq0dnf8"; depends=[]; }; HDInterval = derive2 { name="HDInterval"; version="0.2.0"; sha256="1y51q0dwav3x7c0vp571v89vq1a5mivsxsyahqrv1la12zw0m7il"; depends=[]; }; @@ -1756,11 +1765,11 @@ in with self; { HDoutliers = derive2 { name="HDoutliers"; version="1.0"; sha256="0pby640bad0jcf1lkwg2g6flassb1pimnjm411c6x8rgvmiphc23"; depends=[FactoMineR FNN mclust]; }; HDtest = derive2 { name="HDtest"; version="2.1"; sha256="1c9x4s59762sp7drbm5h1xv22kpifq7p0x3dkrfcd0ficbbma5v8"; depends=[checkmate clime doParallel expm fastclime foreach MASS mvtnorm]; }; HDtweedie = derive2 { name="HDtweedie"; version="1.1"; sha256="14awd7sws0464f68f5xwnv1xvr0xflvx2z2zzcfj1csvk3af0zzj"; depends=[]; }; - HEMDAG = derive2 { name="HEMDAG"; version="2.6.0"; sha256="0mrxwm1a1axdm80by9xx0m3fla2v6sigcfiq3p9j7zg2myhk1bn9"; depends=[doParallel foreach graph plyr precrec preprocessCore RBGL]; }; + HEMDAG = derive2 { name="HEMDAG"; version="2.6.1"; sha256="138byk1vzkw9g58ml3vf2ivj0bdanj8klqv0y8s7af3s5swlis18"; depends=[doParallel foreach graph plyr precrec preprocessCore RBGL]; }; HETOP = derive2 { name="HETOP"; version="0.2-6"; sha256="1fjwyqh7l296pghmc4m81q8icgbhvqvxr61zd638fr46gls3ky2p"; depends=[R2jags]; }; HGNChelper = derive2 { name="HGNChelper"; version="0.8.1"; sha256="0qwkk5658j4j6w2wgvxkp38cyvscjp93d3zc7gb97vcihqx0ngxa"; depends=[]; }; HGSL = derive2 { name="HGSL"; version="1.0.0"; sha256="1p453xr3d1bmqc6mrmzb0hz9p0gp25m6v6qr0l3bapcf71vzbvq1"; depends=[]; }; - HH = derive2 { name="HH"; version="3.1-39"; sha256="0qhprqspks2zjxa82cicsr7nqhpaasklsc4apxkmqfyr5dva0q10"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; + HH = derive2 { name="HH"; version="3.1-40"; sha256="18m8sj1s1v94a2nvrbii96ji0j9v3jajqyv9wrky72m903cj8nbr"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; HHG = derive2 { name="HHG"; version="2.3.2"; sha256="159bs5cxdm770h66fam48451n9krpw2fn5gr397h730x2w7l41ki"; depends=[Rcpp]; }; HI = derive2 { name="HI"; version="0.4"; sha256="0i7y4zcdr6wcjy43lz9h8glzpdv0pz7livr95xb1j4p8zafykday"; depends=[]; }; HIMA = derive2 { name="HIMA"; version="1.0.7"; sha256="0mvphwmm8gmin933bji2l2gbpjzm42vyc7sdka4xpjfsaal9pp9i"; depends=[doParallel foreach iterators ncvreg]; }; @@ -1769,9 +1778,9 @@ in with self; { HK80 = derive2 { name="HK80"; version="0.0.2"; sha256="0c8scpzl5xgqm9rlsvh5nl3bz42i5pzvb873j9bn3bi15gcknbny"; depends=[]; }; HKprocess = derive2 { name="HKprocess"; version="0.0-2"; sha256="1j2yhb7k8zf4nlzdf0p6x9ca7ak4lwwak8mcc60kpilw2fws27k5"; depends=[gtools MCMCpack]; }; HLMdiag = derive2 { name="HLMdiag"; version="0.3.1"; sha256="02pgvfyj3xpy7laxryqivsws8jl3m79fwfzpqj8ad794a06gh87g"; depends=[ggplot2 MASS Matrix mgcv plyr Rcpp RcppArmadillo reshape2 RLRsim]; }; - HLSM = derive2 { name="HLSM"; version="0.8.1"; sha256="17y8xv5h6n0z99a858399wwskqcp897q157rl7b838rqip37xlh9"; depends=[coda igraph MASS]; }; + HLSM = derive2 { name="HLSM"; version="0.8.2"; sha256="1jqfk5mlx603s3v069dab7wm0wy8qil50rw1s5x6f21xrahaqks2"; depends=[abind coda igraph MASS]; }; HMB = derive2 { name="HMB"; version="1.0"; sha256="1a4h2d82hglv13q9mq98i67k1x9mkaf4bm2hr9dl3z0q6x0piwqr"; depends=[Rcpp RcppArmadillo]; }; - HMDHFDplus = derive2 { name="HMDHFDplus"; version="1.9.1"; sha256="0gqaagzzspw3a40dqsqhxhjb8kii6xsc62p9b464rkhrwrm5i4z8"; depends=[httr RCurl XML]; }; + HMDHFDplus = derive2 { name="HMDHFDplus"; version="1.9.13"; sha256="1n507nsqz1blikci56jhp48rdpq38dnadh8warc2jmvwizl22a3b"; depends=[httr RCurl XML]; }; HMM = derive2 { name="HMM"; version="1.0"; sha256="0z0hcqfixx1l2a6d3lpy5hmh0n4gjgs0jnck441akpp3vh37glzw"; depends=[]; }; HMMCont = derive2 { name="HMMCont"; version="1.0"; sha256="1drni4f72x83sprn65wnhw0pv1q8lfkgmxdr9h4rwv1accril85x"; depends=[]; }; HMMEsolver = derive2 { name="HMMEsolver"; version="0.1.2"; sha256="0msin7rq3npz221mvrw3zcs6bwz439six99iblx5p3hkp1n1ljf3"; depends=[Rcpp RcppArmadillo Rdpack]; }; @@ -1784,11 +1793,10 @@ in with self; { HMR = derive2 { name="HMR"; version="1.0.0"; sha256="128q3d8r3z9gwnhqszwj8z0kf4la7szkwd11a6x0yhglmyrs1905"; depends=[]; }; HMVD = derive2 { name="HMVD"; version="1.0"; sha256="0agzvsl2n3zg3i519b93jqpiq9zix0bbrjdzk3ymsbb42dzkmj0d"; depends=[MASS]; }; HPbayes = derive2 { name="HPbayes"; version="0.1"; sha256="1kpqnv7ymf95sgb0ik7npc4qfkzc1zb483vwnjpba4f42jhf508y"; depends=[boot corpcor MASS mvtnorm numDeriv]; }; - HRM = derive2 { name="HRM"; version="1.0.2"; sha256="0krd27raa2ys2gsgqpbxpfnmigj8s6mk3al7fh3czx5l0d73iqy1"; depends=[data_table doBy ggplot2 MASS matrixcalc mvtnorm plyr pseudorank Rcpp reshape2 xtable]; }; + HRM = derive2 { name="HRM"; version="1.2.1"; sha256="0qsxwi0v61k1waw21nrz86jazd5wgq2drhan3w8pmb35q2z20s35"; depends=[data_table doBy ggplot2 MASS matrixcalc mvtnorm plyr pseudorank Rcpp reshape2 xtable]; }; HRQoL = derive2 { name="HRQoL"; version="1.0"; sha256="1gr9rhr8gdnh7bw2v3r0xc3yhmzrx2gzgsd8wd5mmsp81ph0h5lz"; depends=[car fmsb Matrix matrixcalc numDeriv RColorBrewer rootSolve]; }; HRW = derive2 { name="HRW"; version="1.0-3"; sha256="12y43sl30949jc9ab10ipx8k4rvb9g8gwaazi8j3k1grh26ivpii"; depends=[KernSmooth]; }; HS = derive2 { name="HS"; version="1.1"; sha256="1vhbchc446j49jj7jgmy4l59n8ahk5l8jp1rl5xwsmn9iqir62mp"; depends=[data_table ggplot2 ggpubr partitions reshape2 tidyr zoo]; }; - HSAR = derive2 { name="HSAR"; version="0.4.2"; sha256="0rxb2klmyynr8rzq6ka8p40lw81wjd0jkw2wg3vg90zny0zps98j"; depends=[Rcpp RcppArmadillo spdep]; }; HSAUR = derive2 { name="HSAUR"; version="1.3-9"; sha256="0b2hyn59lr2pma87fcj7mli3qmrbnfhgd8fv02fa317rj52399qz"; depends=[]; }; HSAUR2 = derive2 { name="HSAUR2"; version="1.1-17"; sha256="0jc554lz5lj7180vd4rbrjkywar4bh38c7i9kyxhd5clg4afxpw8"; depends=[]; }; HSAUR3 = derive2 { name="HSAUR3"; version="1.0-9"; sha256="1rpvblak0xvkavbvbd35zq1lcsl5z1zp30vn70wqbkdj7szhj9b4"; depends=[]; }; @@ -1801,11 +1809,12 @@ in with self; { HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; }; HTSSIP = derive2 { name="HTSSIP"; version="1.4.1"; sha256="1j2f6f3i4di4bvsk44gxz0narg45ld2rahfn23wpgni5bszy0vb3"; depends=[ape coenocliner DESeq2 dplyr ggplot2 igraph lazyeval magrittr phyloseq plyr stringr tidyr vegan]; }; HUM = derive2 { name="HUM"; version="1.0"; sha256="1bq74l88jvscmq9ihv5wn06w2wng073ybvqb2bdx2dmiqlpv6jw2"; depends=[gtools Rcpp rgl]; }; + HURDAT = derive2 { name="HURDAT"; version="0.2.3.1"; sha256="0k80bll26wxn902m7p7va7f9xk5kbwkf538jvdw8qdlz5a77a2aa"; depends=[dplyr purrr readr rlang rvest tidyr xml2]; }; HW_pval = derive2 { name="HW.pval"; version="1.0"; sha256="14nmyqw2d9cmn64789yc54fmiqanh6n1dizp7vj94h7b0jwq63yy"; depends=[]; }; HWEBayes = derive2 { name="HWEBayes"; version="1.4"; sha256="1rbffx6pn031a278ps9aqxcaq8yi73s5kf60za143ysbfxv9dphw"; depends=[MCMCpack mvtnorm]; }; HWEintrinsic = derive2 { name="HWEintrinsic"; version="1.2.2"; sha256="035r5bi7m66g351cmrfmf4cj5qqm4fn5pgy3lzsp3gyp2dv0rkg5"; depends=[]; }; HYRISK = derive2 { name="HYRISK"; version="1.2"; sha256="1ngwwzv1pavmscpca3ryzfxzd9rppsh0sm7k4sp2kzc9c0bix4xp"; depends=[kerdiest pbapply reliaR rgenoud sets triangle]; }; - HaDeX = derive2 { name="HaDeX"; version="1.0"; sha256="14f4ql685wrhsmg9yklbfky7b3vsxm4dyiqmpmrl7199kqzinjc0"; depends=[data_table dplyr DT ggplot2 gsubfn latex2exp readr readxl reshape2 shiny stringr tidyr]; }; + HaDeX = derive2 { name="HaDeX"; version="1.1"; sha256="1c87bj4qiq28a51l90r5rhk9nzn8lgssby686fsin0d3y068krbg"; depends=[data_table dplyr DT ggplot2 gsubfn latex2exp readr readxl reshape2 shiny stringr tidyr]; }; HadoopStreaming = derive2 { name="HadoopStreaming"; version="0.2"; sha256="1l9msaizjvnsj1jrpghj4g057qifdgg6vbqhfxhn1fiqdqi2056q"; depends=[getopt]; }; HandTill2001 = derive2 { name="HandTill2001"; version="1.0.0"; sha256="0qxaxwizx24gm3iycdmwdn8mqvnwnjhacsp9nwl9w4djayb5a9sg"; depends=[]; }; Hapi = derive2 { name="Hapi"; version="0.0.3"; sha256="0jqjhfq38k161kqff5cx0vxpsmjm2y5ca7049mvqiwqwvi4fp08m"; depends=[ggplot2 HMM]; }; @@ -1815,11 +1824,11 @@ in with self; { HarmonicRegression = derive2 { name="HarmonicRegression"; version="1.0"; sha256="0inz3l610wl0ibqjyrhfbmwmcfzcmcfhixai4lpkbfsyx93z2i4d"; depends=[]; }; Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; }; HellCor = derive2 { name="HellCor"; version="1.2"; sha256="1k7k8gj70wc31w27gykiy0fv2bs9q73414ma0hn3ziqg4cnrgl7m"; depends=[energy]; }; - HelpersMG = derive2 { name="HelpersMG"; version="3.9"; sha256="01az2cwz2vw1z3qjmwi8va4qp37fxy955sjdlk2jbk0cysf3p20q"; depends=[coda lme4]; }; + HelpersMG = derive2 { name="HelpersMG"; version="4.0"; sha256="18rv27xmvalhmshc847yq63srym0k7x352y1m033qpy5j0fjrijz"; depends=[coda lme4]; }; HeritSeq = derive2 { name="HeritSeq"; version="1.0.1"; sha256="0l1saxwj99xwkzcy43v0k9sicqwpw9gc8ywxpablagcddfj05pi3"; depends=[cplm DESeq2 lme4 MASS pbapply SummarizedExperiment tweedie]; }; HextractoR = derive2 { name="HextractoR"; version="1.4"; sha256="1wp7n92wgrjyklq159ymrw8y5ads6lhj2fcz54rzdnccdyx5naxi"; depends=[doParallel foreach seqinr]; }; HiCfeat = derive2 { name="HiCfeat"; version="1.4"; sha256="1imz7zfax74aakzk8457jww9r66qxpr2ncyvjj0y5paxdn76lnnq"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; - HiClimR = derive2 { name="HiClimR"; version="2.1.5"; sha256="0qw0gpgp00gvm0kcsghwcnnhslyrigiknw4al6gs91ppq2fd2k78"; depends=[ncdf4]; }; + HiClimR = derive2 { name="HiClimR"; version="2.1.6"; sha256="1s7l78xjvld8cdbz18zk6mbzwwzpm9x6vj6fq4j4hrz11bzsr14y"; depends=[ncdf4]; }; HiCseg = derive2 { name="HiCseg"; version="1.1"; sha256="19581k3g71wrznyqrp4hmspqyzcbcfbc48xgjlq13zmqii45hcn6"; depends=[]; }; HiDimDA = derive2 { name="HiDimDA"; version="0.2-4"; sha256="0gxkxzys9mcy33xvsim8klaqmb2xwvy5bvgkn9r400j4qfjd3cgg"; depends=[]; }; HiLMM = derive2 { name="HiLMM"; version="1.1"; sha256="09135cwi6kqrvzdlivm86q1dqn6cbbi6nspdm0c2s700jl49pl5z"; depends=[]; }; @@ -1828,16 +1837,16 @@ in with self; { HierDpart = derive2 { name="HierDpart"; version="0.5.0"; sha256="1lrp5snkx5irrx6b19wdfmkpbxdy4gxkhpjibfin109s5r54jvvg"; depends=[ade4 adegenet ape diveRsity entropart GGally ggplot2 hierfstat mmod pegas permute reshape2 tibble vegan]; }; HierO = derive2 { name="HierO"; version="0.2"; sha256="1lqj5grjly4kzxl7wb192aagz2kdvpnjdan2kcg5yxwvg1xcvwv1"; depends=[bitops RCurl rneos tcltk2 XML]; }; HighDimOut = derive2 { name="HighDimOut"; version="1.0.0"; sha256="0r7mazwq4fsz547d3nyavmqya7144lg3fkl5f7amrp48l9h85vx2"; depends=[DMwR FNN foreach ggplot2 plyr proxy]; }; - HistDAWass = derive2 { name="HistDAWass"; version="1.0.3"; sha256="1kvq9q4lnbl2jkj7dvm2znp2ihvv1j6778pnfkkxflxa8aks29k6"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; + HighestMedianRules = derive2 { name="HighestMedianRules"; version="1.0"; sha256="01fj3xgrb9iav5v91bq04hzv9nhnwy8l00dx6yykghwvzjwfv3ih"; depends=[RMallow]; }; + HistDAWass = derive2 { name="HistDAWass"; version="1.0.4"; sha256="18l9hjkdcwk1lh19z240s9rqg49v9gpydllcaa5jndysylx8ybjr"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; HistData = derive2 { name="HistData"; version="0.8-6"; sha256="0an8cki2ahaf3ynbcqgikxi90l3bv7gcn6nnwnli9g1br89y3bd4"; depends=[]; }; HistogramTools = derive2 { name="HistogramTools"; version="0.3.2"; sha256="1wkv6ypn006d8j6bpbhc1knw0bky4y8r7jp87482yd19q5ljsgv0"; depends=[ash Hmisc stringr]; }; HiveR = derive2 { name="HiveR"; version="0.3.42"; sha256="09h061511pk7iy1k9gb3ifa5q6gd17ix9sn2fshl6gp5sxnysn4f"; depends=[jpeg plyr png RColorBrewer rgl tkrgl]; }; - Hmisc = derive2 { name="Hmisc"; version="4.3-0"; sha256="0rb1m6138lqzb46nss9ggvhghipd10vdnwsy6iq2wzynrynzkwkz"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; + Hmisc = derive2 { name="Hmisc"; version="4.3-1"; sha256="02ni7719acdmc8pcbx07b7x2nqsjrwq4smnx9qlzqjmx4pmp3cwc"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; Hmsc = derive2 { name="Hmsc"; version="3.0-4"; sha256="1h2szg5qrqfx8h982n860bw0mcwqgj1x269vd7c191yhsfhqgkny"; depends=[abind ape BayesLogit coda fields FNN ggplot2 MASS Matrix MCMCpack mvtnorm nnet pdist pROC statmod truncnorm]; }; HoRM = derive2 { name="HoRM"; version="0.1.2"; sha256="0vfsya6423i25szdj5s8pa8pwshiqykikxdbbj7r2nz73x3qp6hy"; depends=[ggplot2 MASS orthopolynom quantmod rsm]; }; Holidays = derive2 { name="Holidays"; version="1.0-7"; sha256="1srfbhlrf0pd6gzhp4hbic555lb7camk084rn1qz2g7fjvyijqiq"; depends=[TimeWarp]; }; Homeric = derive2 { name="Homeric"; version="0.1-3"; sha256="1vcs8fj39zpz45p7gph0mnx65hgr35na0b79i8llyw7i1h7zqzxr"; depends=[]; }; - HotDeckImputation = derive2 { name="HotDeckImputation"; version="1.1.0"; sha256="1mqfn6yw5846ynrcgzka0m6ikfppa5civjkhj42rhp2v2xk25li7"; depends=[Rglpk]; }; Hotelling = derive2 { name="Hotelling"; version="1.0-5"; sha256="1ism2lzi2kmi62gp319qsi64pj2kj5sfh50f1qnv8vgdkb76bdx5"; depends=[corpcor]; }; HyPhy = derive2 { name="HyPhy"; version="1.0"; sha256="0994ymv7sswbp8qw3pay34s926cflw2hq2gnchw7rknybvlsrinq"; depends=[ape R_utils]; }; HyRiM = derive2 { name="HyRiM"; version="1.0.3"; sha256="0zx292554kr2s4107db5y7sr869kia9q6dyzhdjy11ksw23sj9m4"; depends=[compare orthopolynom]; }; @@ -1864,7 +1873,7 @@ in with self; { ICAFF = derive2 { name="ICAFF"; version="1.0.1"; sha256="0zazx4nv81s75appg10aayks04mx6m5n9yf5hqrbxh3yj68vzxfy"; depends=[]; }; ICAMS = derive2 { name="ICAMS"; version="2.0.10"; sha256="1f22bwbxnqqccmkmsx4ll8qaviz9w7f64jx1whikvnhsxw634xp5"; depends=[Biostrings BSgenome data_table dplyr GenomeInfoDb GenomicRanges IRanges RColorBrewer stringi]; }; ICAOD = derive2 { name="ICAOD"; version="0.9.9"; sha256="04s51rxhr4axxr1rnhnq87lcn9mjj8g18xr35awnmc4sjg2aavaf"; depends=[cubature mnormt mvQuad nloptr Rcpp RcppEigen sn]; }; - ICBayes = derive2 { name="ICBayes"; version="1.1"; sha256="1bmxba3bv9szzxvjf1blwxwdhw87h7s04cfn63c1gqpnpwsmr03y"; depends=[coda HI survival]; }; + ICBayes = derive2 { name="ICBayes"; version="1.2"; sha256="1hdh7g4nk6yy0xz9564vpvh1blrw30lvyw2wc5mmgn78kwjqla34"; depends=[coda HI survival]; }; ICC = derive2 { name="ICC"; version="2.3.0"; sha256="0y8zh9715cp9bglxpygqwgigrarq37sj845lk1xl0ydwinl0a6kk"; depends=[]; }; ICC_Sample_Size = derive2 { name="ICC.Sample.Size"; version="1.0"; sha256="1w6v1jp8bfvf6c49ikswkc5527gdx5cyqnw95x00pgmm6riwlsp9"; depends=[]; }; ICCbin = derive2 { name="ICCbin"; version="1.1.1"; sha256="1pzlaj7w98pgrlg3zvpmdv0dpgi5gih0j73qv86ak75fkxvrnzzw"; depends=[]; }; @@ -1884,21 +1893,22 @@ in with self; { ICSShiny = derive2 { name="ICSShiny"; version="0.5"; sha256="0a13vps0mkv5qs6qnl7ar0mdbkbd7i1c6kgwahmkb3id3n9bw0cl"; depends=[DT ICS ICSNP ICSOutlier rrcov shiny simsalapar]; }; ICV = derive2 { name="ICV"; version="1.0"; sha256="1na87i39jy5d8ibldqcqz3a072ihkgcl0k629sxch9hk6v6j5lly"; depends=[]; }; ICcalib = derive2 { name="ICcalib"; version="1.0.8"; sha256="1y2w12ka0qxh9dg6dlcrnndz1xrv8gkppan64qkyk5vjrh18ajz4"; depends=[fitdistrplus icenReg ICsurv MASS msm numDeriv Rcpp RcppArmadillo survival]; }; - ICcforest = derive2 { name="ICcforest"; version="0.5.0"; sha256="0m4bqw06alpj8p0yska4rizra73mgvcpd4zlgmxr146cgdv2lrgd"; depends=[icenReg ipred partykit survival]; }; + ICcforest = derive2 { name="ICcforest"; version="0.5.1"; sha256="0z511d3drq5flxwvx7kjv3v5yanjhvs5ayvkm996jbiz3k49a12v"; depends=[icenReg ipred partykit survival]; }; ICsurv = derive2 { name="ICsurv"; version="1.0"; sha256="1mbndpy3x5731c9y955wscy76jrxlgv33bf6ldqp65cwyvdgxl86"; depends=[MASS matrixcalc]; }; ICtest = derive2 { name="ICtest"; version="0.3-2"; sha256="00h72rngcyjhin9g8x80mypm8zx765nm5jgsyjya9m4kw8x4h8la"; depends=[GGally ggplot2 ICS ICSNP JADE png Rcpp RcppArmadillo survey xts zoo]; }; IDCard = derive2 { name="IDCard"; version="0.3.0"; sha256="06b5zqmgh4clni3mv6ab2a52r4z34isbz0hd1i61793gps9fkc0y"; depends=[stringr]; }; IDE = derive2 { name="IDE"; version="0.3.0"; sha256="1m1y7gd8i14kl54qxhjy7bnf2md5vs7bb73k7k92nizv941qn0mn"; depends=[DEoptim dplyr FRK ggplot2 Matrix sp spacetime sparseinv tidyr]; }; - IDF = derive2 { name="IDF"; version="1.1"; sha256="19fx04gvzwzkxbd453l3wx46s22dbnh0nxdrmsr4f7l67kihbwdr"; depends=[evd ismev]; }; IDPSurvival = derive2 { name="IDPSurvival"; version="1.2"; sha256="0hifs8vw3rxlb5vlxs1433pcv2dh7p0mxpgb2n03d98f20vkdwfw"; depends=[gtools Rsolnp survival]; }; IDPmisc = derive2 { name="IDPmisc"; version="1.1.20"; sha256="0zy6mxqa8arq0vvhsdcifzm3085c23rnwa1n36fhircph1xwvfdw"; depends=[lattice]; }; IDSpatialStats = derive2 { name="IDSpatialStats"; version="0.3.10"; sha256="1980nsbcibsas99xcqfc54k6zhh9lg2xdgmihp846xhqgw9xjjy7"; depends=[doParallel foreach igraph spatstat]; }; IDetect = derive2 { name="IDetect"; version="0.1.0"; sha256="1q1jwgildhx6sp883ni7vcsa3gj997855v5ky41dyf34kv7hvdl1"; depends=[]; }; IDmeasurer = derive2 { name="IDmeasurer"; version="1.0.0"; sha256="0n7rziaaxm9dqixmw6rxgq9dwnwdl3dsdnpd9s59k5skdlaxnl5m"; depends=[infotheo lme4 MASS]; }; IDmining = derive2 { name="IDmining"; version="1.0.6"; sha256="0fsl1byz0n5jwswh2ydzz5lsycja54545cf7dr1r3h1a372yz2mv"; depends=[data_table doParallel foreach]; }; + IETD = derive2 { name="IETD"; version="1.0.0"; sha256="0avhyw0zcb8vj0nqfy41yq5kcd8yf9rmaawdvfcy5rqwxmi1mw9l"; depends=[doParallel dplyr foreach ggplot2 lubridate Rdpack]; }; IFP = derive2 { name="IFP"; version="0.2.1"; sha256="06zyadcr8p6q0c5h9n29yl02ixysdj6lfbn9hfir0bk9hyv9yfyr"; depends=[coda haplo_stats]; }; IGG = derive2 { name="IGG"; version="1.0"; sha256="1cibb9z18xc1zx1813lk14n6p5am84hm7w0hkrsif4j3p89lrwif"; depends=[GIGrvg glmnet MASS Matrix pscl]; }; IGP = derive2 { name="IGP"; version="0.1.0"; sha256="0xv89gmyfgnq5kzcmjbp5nx9zbr3gbdzkvffp99bxbkvf759m255"; depends=[PythonInR R6]; }; + IGST = derive2 { name="IGST"; version="0.1.0"; sha256="12ycrfsgwakaj3k39k1j4ky58wr7a2ibyz6j9cznvjjv6cgz9zg5"; depends=[BootMRMR e1071]; }; IHSEP = derive2 { name="IHSEP"; version="0.1"; sha256="1djc5509b5iyi6y0i36h77l6sq1h0w721v2isxqldcqk3gb0bx11"; depends=[lpint Rcpp]; }; IIS = derive2 { name="IIS"; version="1.0"; sha256="01h7nncxn1drnqf1h7snw0pvkgkn8dxq53k2sqcw3kdjlk5mj2l6"; depends=[asbio BSDA Hmisc NSM3 Rfit]; }; ILS = derive2 { name="ILS"; version="0.2"; sha256="0lj3ripkaq6jn00lpxjihjhm8g1gbkppmb1y9kkrymphg80k1by7"; depends=[depthTools fda_usc lattice MASS multcomp]; }; @@ -1924,15 +1934,16 @@ in with self; { IPDFileCheck = derive2 { name="IPDFileCheck"; version="0.6.2"; sha256="16fapss0y31y9ynizhv9z8zqywf0aam2v7g53dcwylvdjc6qpzi2"; depends=[dplyr eeptools GlobalOptions lubridate testthat]; }; IPEC = derive2 { name="IPEC"; version="0.1.2"; sha256="1fglr5hs61n13251145wqzvxy362fx32yzral96xd8li76ljxiic"; depends=[MASS numDeriv]; }; IPMRF = derive2 { name="IPMRF"; version="1.2"; sha256="1zvwwhiy0p134zvm5ldc92pdd1ap72bhbrlf02rz9m2hlsxmwy67"; depends=[gbm party randomForest]; }; - IPMpack = derive2 { name="IPMpack"; version="2.1"; sha256="08b79g5a9maxnxladvc2x2dgcmm427i8p6hhgda3mw2h5qmch2q3"; depends=[MASS Matrix nlme]; }; IPPP = derive2 { name="IPPP"; version="1.1"; sha256="19ccs25fd56ns7ssi51w2jzjd4d57vyimwmfvf27mmigb537bd5y"; depends=[]; }; + IPV = derive2 { name="IPV"; version="0.1.1"; sha256="0bd59sfqqz2g6lwzlg3vqpw0y8q989n4q76qr1dvnq847c6fg8wz"; depends=[ggforce ggplot2]; }; IPWboxplot = derive2 { name="IPWboxplot"; version="0.1.0"; sha256="0lyqcjnbissick5hzwrx21pykq4pww9j0i03j0gy43awl1cq5qq8"; depends=[isotone]; }; IPWsurvival = derive2 { name="IPWsurvival"; version="0.5"; sha256="0lmw0ifj8cds8lzyjkkv0i0zim23p0a3pawlhmhdm3nfvwawb853"; depends=[survival]; }; IQCC = derive2 { name="IQCC"; version="0.7"; sha256="1zalpmyywkrnci0jd8irakjhiqmr52zhj1sbxf9pz5c7wks2rdbc"; depends=[MASS miscTools qcc]; }; IRATER = derive2 { name="IRATER"; version="0.0.1"; sha256="0jxdvjmnmangbqy3ibb5qrj9jz3wrzs0wa1r2gjk4v8vsbk0ipcf"; depends=[coda lattice plyr R2admb]; }; IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.3.0"; sha256="09nzzalz107l6dscl4xxd8znwd9fppjlfyvn1vfd9jhx7mkjlnlq"; depends=[dplyr IRISSeismic pracma RCurl seismicRoll signal stringr XML]; }; IRISSeismic = derive2 { name="IRISSeismic"; version="1.5.2"; sha256="117p2kh2r2iw758iqlpqaak83czfv34p15907g18x496r5vri429"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; - IROmiss = derive2 { name="IROmiss"; version="1.0.1"; sha256="01l08s1g7h8cki372daa61pw3wac3pbv5d4yqnphg5p8ihsmrc5d"; depends=[equSA huge mvtnorm ncvreg]; }; + IROmiss = derive2 { name="IROmiss"; version="1.0.2"; sha256="0rcyijx5w8nn7n1hc4sdrphgggnq3676f8fpzxs85vkk52z0vp0a"; depends=[equSA huge mvtnorm ncvreg]; }; + IRTBEMM = derive2 { name="IRTBEMM"; version="1.0.2"; sha256="03a1kjhyaqamy4988ns4m9mwbdljcyppcf16hmmi9q0zrzn0d2ki"; depends=[]; }; IRTShiny = derive2 { name="IRTShiny"; version="1.2"; sha256="094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v"; depends=[beeswarm CTT ltm psych shiny shinyAce]; }; IRdisplay = derive2 { name="IRdisplay"; version="0.7.0"; sha256="12chk53nf4zckgc4yl7gbvd7m5dvli52inp5b3f0zvcjvfncksli"; depends=[repr]; }; IRkernel = derive2 { name="IRkernel"; version="1.1"; sha256="1viqxs91dys1z4cf7gb59rmqvzb8lc7jdp4azrpmhgwa8qf46s94"; depends=[crayon digest evaluate IRdisplay jsonlite pbdZMQ repr uuid]; }; @@ -1942,13 +1953,14 @@ in with self; { ISEtools = derive2 { name="ISEtools"; version="3.1.1"; sha256="1dipff8msky1rxbrckyxh7c5mh40q4a5hjdghsqkxklwh9zmrs44"; depends=[coda Xmisc]; }; ISLR = derive2 { name="ISLR"; version="1.2"; sha256="1bfay6cs40crhh34v2ksn4zdxivimfyjvk19wqbnjr7vs837l3xh"; depends=[]; }; ISM = derive2 { name="ISM"; version="0.1.0"; sha256="0by0w6zgnwcwzbmxx16s8mb1avhc6aiavqp0qkxx6hr70vrgb997"; depends=[rJava xlsx xlsxjars]; }; - ISOcodes = derive2 { name="ISOcodes"; version="2019.12.22"; sha256="1k2f2258bwzs0b3nxma9kcw395qkljvk514a7047rx4dn0iwd874"; depends=[]; }; + ISOcodes = derive2 { name="ISOcodes"; version="2020.03.16"; sha256="1hz1sj57qkkkrgn8slsz2n4jv1fkyp40503j9rg30lxy4gmb83hn"; depends=[]; }; ISOpureR = derive2 { name="ISOpureR"; version="1.1.3"; sha256="1ydhsh3v6n7prrg0dm7hsg8wx1244g791xnz1sjyhljhm31hgwc0"; depends=[futile_logger Rcpp RcppEigen]; }; ISOweek = derive2 { name="ISOweek"; version="0.6-2"; sha256="1f1h8pgjaa14cvaj8ldl87b4vslxwvyfj46m0hkylwp73sv3g2mm"; depends=[stringr]; }; ISR3 = derive2 { name="ISR3"; version="0.98"; sha256="0mmpdl9ndlj9i0k3zl7ja0g7y9pm67igw925ld5qnz7a36plygxs"; depends=[]; }; + ISRaD = derive2 { name="ISRaD"; version="1.2.3"; sha256="1xgk0mda2w22yf44flyyga15cxffzn25rg83g7dmqa8rqjiis51j"; depends=[assertthat devtools dplyr ggplot2 maps openxlsx pangaear raster rcrossref RCurl rgdal stringr tidyr tidyverse]; }; ISwR = derive2 { name="ISwR"; version="2.0-8"; sha256="1bay7na68awq68bw82dwhcfxp2d3di2dg33islq0mgrhd4sfdfza"; depends=[]; }; ITGM = derive2 { name="ITGM"; version="0.41"; sha256="0q278ga51asrr918l088v6qdl17vnmrcbz7y1xc4rzmb61lkwqy7"; depends=[data_table Fgmutils gsubfn plyr sqldf]; }; - ITNr = derive2 { name="ITNr"; version="0.3.0"; sha256="1aiqkpxnam13r4q8q03yzd6a1wvl2gf40kqncbrpfvcaiv5zsq68"; depends=[blockmodeling circlize comtradr cowplot dplyr fastmatch GGally ggplot2 GoodmanKruskal igraph intergraph maps network networkDynamic plyr RColorBrewer reshape2 sna tnet WDI xergm_common]; }; + ITNr = derive2 { name="ITNr"; version="0.6.0"; sha256="0yxn3768819ph49bizprj3arrvz9rzhb45rkcpfivwfwlyf010yy"; depends=[blockmodeling circlize cowplot dplyr fastmatch GGally ggplot2 igraph intergraph maps network networkDynamic plyr RColorBrewer reshape2 sna tnet WDI]; }; ITRLearn = derive2 { name="ITRLearn"; version="1.0-1"; sha256="03xdbpn3qddcq9krdpnywd3xbzfh2viym2qqx6rcqs7w7bdhhlk6"; depends=[Formula kernlab]; }; ITRSelect = derive2 { name="ITRSelect"; version="1.0-1"; sha256="0llr4hrlbnb728j5rw7vd3r9qlqf571hrldnm72kicis5di2v5di"; depends=[Formula Matrix ncvreg Rglpk svMisc]; }; IUPS = derive2 { name="IUPS"; version="1.0"; sha256="01pv03ink668fi2vxqybli0kgva13gxhqfdxkwz6qk5rnpzwvf5w"; depends=[boot Matching R2jags]; }; @@ -1959,21 +1971,22 @@ in with self; { ImaginR = derive2 { name="ImaginR"; version="0.1.7"; sha256="12ypfrqw6xym84i1axd3h0qd2md96rc0glas3rgzpdhdyw4lbfmn"; depends=[imager jpeg]; }; Imap = derive2 { name="Imap"; version="1.32"; sha256="0b4w0mw9ljw6zxwvi0qzb08yq9n169lzgkdcwizrd07x9k9xjxs7"; depends=[]; }; Immigrate = derive2 { name="Immigrate"; version="0.0.2"; sha256="1khxjh4lpsgv5qqk30ry6r8y3vjblwxsx9frv63pws4x1j6j2apm"; depends=[pROC Rcpp]; }; - ImpactEffectsize = derive2 { name="ImpactEffectsize"; version="0.3.0"; sha256="1r4cm8q72il5n1glgn3c4jyb0mb0mgyc44fy047ijcxwlrrwcswk"; depends=[AdaptGauss matrixStats parallelDist pracma RcppAlgos]; }; + ImpactEffectsize = derive2 { name="ImpactEffectsize"; version="0.3.2"; sha256="0v0hbzsmziclpp7cvd5mc4mv6wbi0y4ysw4p0casfcfmkfxv5n0l"; depends=[DataVisualizations matrixStats parallelDist pracma RcppAlgos]; }; ImpactIV = derive2 { name="ImpactIV"; version="1.0"; sha256="1bb6gw1h15hscr71hy779k2x5ywzx63ylim3hby02d7fnnj46p58"; depends=[nnet]; }; ImportExport = derive2 { name="ImportExport"; version="1.1"; sha256="12i9mwspk59zicn1mn21xrs90c8dqxm1q7alqbzscgkpf3xbjrnn"; depends=[chron gdata haven Hmisc RODBC xlsx]; }; ImputeRobust = derive2 { name="ImputeRobust"; version="1.3-1"; sha256="1zvwlpffpm4gqysz57clf8jkqr72yjbzx90pdy95la51m0b6cdbd"; depends=[extremevalues gamlss gamlss_dist lattice mice purrr]; }; InDisc = derive2 { name="InDisc"; version="1.0.2"; sha256="1mvd6r1ly924n17275n4i9p8sghvm929kbir0bq6850kk2m0dgq7"; depends=[optimbase psych]; }; InPosition = derive2 { name="InPosition"; version="0.12.7.1"; sha256="0d9c7dwaa1v0j8p5ff9223fc2gkbmbvyqylma2d8l4x5m92jmkv0"; depends=[ExPosition prettyGraphs]; }; - InSilicoVA = derive2 { name="InSilicoVA"; version="1.2.5"; sha256="1irbfdrab9mz50py8h3gnjj14swh7b1pbrqf2fj04ym206rsca02"; depends=[coda ggplot2 InterVA5 rJava]; }; + InSilicoVA = derive2 { name="InSilicoVA"; version="1.2.7"; sha256="0xfvrsq84wm31j0ih5khqhkhk4ygijfkh9w2bjrw3d5wgpdm0yv3"; depends=[coda ggplot2 InterVA5 rJava]; }; IncDTW = derive2 { name="IncDTW"; version="1.1.3"; sha256="1lbg1frx5hlv9pj56xsr4rdzhkq2h21r74hsjhlj0gvg1ykn6hvj"; depends=[data_table ggplot2 Rcpp RcppArmadillo RcppParallel scales]; }; + IncomPair = derive2 { name="IncomPair"; version="0.1.0"; sha256="156mc4csbxz976md7ikjd6sqamzsfc8ik9xf1qbhrfl8y7957kbb"; depends=[]; }; IncucyteDRC = derive2 { name="IncucyteDRC"; version="0.5.4"; sha256="1k7jqcyx5n4my5rbyfa693ganbk91xganyagq8x8szli9h1491ii"; depends=[cowplot dplyr drc DT ggplot2 magrittr shiny tidyr XML]; }; IndTestPP = derive2 { name="IndTestPP"; version="1.0"; sha256="1ywl35k2syv46pz6ap5sjkynapqj04aq197czspqky0pvrq7ldr1"; depends=[]; }; IndepTest = derive2 { name="IndepTest"; version="0.2.0"; sha256="017jasqsxm5m13rhfy9gxvd8nfib5k5y5c8520p3hcffqrxr683p"; depends=[FNN mvtnorm Rdpack]; }; IndependenceTests = derive2 { name="IndependenceTests"; version="0.2"; sha256="04qfh2mg9xkfnvp6k7w1ip4rb663p3pzww9lyprcjvr3hcac7gqa"; depends=[xtable]; }; IndexConstruction = derive2 { name="IndexConstruction"; version="0.1-2"; sha256="16fwbq4d9k3092qwj7yk2s66gp8rgv7g0ii4240imfjh28zlb6xa"; depends=[fGarch KernSmooth lubridate RcppBDT xts zoo]; }; - IndexNumR = derive2 { name="IndexNumR"; version="0.1.2"; sha256="0dip7v4z36k3fhl8szrbl11gcqy1rr7kgmcsajpdwd16jixj1d27"; depends=[]; }; - IndexNumber = derive2 { name="IndexNumber"; version="1.0"; sha256="03c01f7pk0bf1mlnfmnyc242gpc0ac6svzb6lfwhqkv964kdvhsy"; depends=[]; }; + IndexNumR = derive2 { name="IndexNumR"; version="0.1.3"; sha256="1jrbl2gwgp4msigkspgqcvgvxq169jiiz4acixky37i6hw0n34p6"; depends=[]; }; + IndexNumber = derive2 { name="IndexNumber"; version="1.1"; sha256="1db1bd44zm8wwqr6rpnq97xj6jrv297vzs156by33z18y79fdgbq"; depends=[]; }; IndianTaxCalc = derive2 { name="IndianTaxCalc"; version="1.0.2"; sha256="1fxw884wj9n8drk2xz3rgr4f7b4fckh5firrf5gdz6d1nk9hdvc1"; depends=[]; }; InfDim = derive2 { name="InfDim"; version="1.0"; sha256="0rh3ch0m015xjkxy08vf9pc6q7azjc6sgicd2j6cwh611pqq39wq"; depends=[]; }; InferenceSMR = derive2 { name="InferenceSMR"; version="1.0"; sha256="13d3v8kyk6br33659jgql6j1nqmnd8zszqrwfw2x3khkiqzgdmhk"; depends=[survival]; }; @@ -2035,7 +2048,7 @@ in with self; { JQL = derive2 { name="JQL"; version="3.6.9"; sha256="0d926hngv4r6zl5f6yai3jwhl9hql2hv6ja3yjgplglkns66g4lh"; depends=[caret pdist randomForest]; }; JRF = derive2 { name="JRF"; version="0.1-4"; sha256="1xpvscn9iawwa0vfh3kfwzdni436bf42nvm18b8abh033ljvqpij"; depends=[]; }; JSM = derive2 { name="JSM"; version="0.1.3"; sha256="1p5vlk2fcrb42pi7srkymjacfg05vlaspvhaw94lq1rhvxdw87yl"; depends=[nlme Rcpp RcppEigen statmod survival]; }; - JSmediation = derive2 { name="JSmediation"; version="0.1.0"; sha256="1qmjkachpvql0nrn7lf2n32w9zp12saha2y3zmdg086k1q12xifl"; depends=[broom data_table dplyr glue knitr magrittr MASS purrr rlang tibble]; }; + JSmediation = derive2 { name="JSmediation"; version="0.1.1"; sha256="06p413jfv02k88jdsbplnz696knxglgcqa4pjrgkhhic6awdh0jf"; depends=[broom data_table dplyr glue knitr magrittr MASS purrr rlang tibble]; }; JWileymisc = derive2 { name="JWileymisc"; version="1.1.0"; sha256="08c09jcax0ppl9q47px2anybcj8rfha8xdx226y002valqji5bz3"; depends=[cowplot data_table emmeans extraoperators ggplot2 ggthemes lavaan lme4 MASS mgcv mice multcompView psych quantreg rms robustbase VGAM]; }; JacobiEigen = derive2 { name="JacobiEigen"; version="0.3-3"; sha256="1zcs9qhf2216c590hj6qc837rnciyfsirg4zg655vxn59fgzpvyb"; depends=[Rcpp]; }; JamendoR = derive2 { name="JamendoR"; version="0.1.0"; sha256="1v5i4ggc4igp83pik32fqp07ff8iv7dp93b3qhxcsy1msa4l88lx"; depends=[dplyr httr jsonlite]; }; @@ -2045,14 +2058,13 @@ in with self; { Jmisc = derive2 { name="Jmisc"; version="0.3.1"; sha256="1szn29dng54l2xmrm6pg3d5rmwdc1ks23vsnsmplnr5rx7yj002s"; depends=[]; }; JoSAE = derive2 { name="JoSAE"; version="0.3.0"; sha256="1vjxzbfs8a7kpmn2lb9dca67d4njmzjr3pl16s0r9ihmmxxwwili"; depends=[nlme]; }; Johnson = derive2 { name="Johnson"; version="1.4"; sha256="12ajcfz5mwxvimv8nq683a2x3590gz0gnyviviyzf5x066a4q0lj"; depends=[]; }; - JointAI = derive2 { name="JointAI"; version="0.6.0"; sha256="13amg3s8hq73qfn6makmqhgdpmq6asqbwhgc0b0haj7iw9ck42ma"; depends=[coda doParallel foreach MASS mcmcse rjags rlang]; }; + JointAI = derive2 { name="JointAI"; version="0.6.1"; sha256="10q1wnyj56mdgkp9m2csxxxpsl7k71a8vq27cbpisf3b1anq9yyw"; depends=[coda doParallel foreach MASS mcmcse rjags rlang]; }; JointModel = derive2 { name="JointModel"; version="1.0"; sha256="1zgs5c7saqyqxvxmhw5sxy5w67abq344aid6igw1da05bfy2az6h"; depends=[lme4 statmod survival]; }; JointNets = derive2 { name="JointNets"; version="2.0.1"; sha256="18n9dsy0w0nh7dznp6gw6g5fhhjhf5y589nb49hri0721kq1h3rb"; depends=[brainR igraph JGL lpSolve MASS misc3d oro_nifti pcaPP rgl shiny]; }; Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; }; JuliaCall = derive2 { name="JuliaCall"; version="0.17.1"; sha256="0v0mn3q9mp8xq6bpm870v9a228b20n22cph3s0ngphni07pi0kwr"; depends=[knitr Rcpp]; }; JumpTest = derive2 { name="JumpTest"; version="1.1"; sha256="0y375m5477nq0ybnjmfnd8hi45d8jmdnprqvw5f70llpd7bcghh0"; depends=[MASS Rcpp RcppEigen]; }; KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; }; - KATforDCEMRI = derive2 { name="KATforDCEMRI"; version="1.0.1"; sha256="1wcm0h9lwpiw4crf15h5pfv9fxzpmf3g4jkylgnn9a36305rpdl8"; depends=[locfit matlab R_matlab]; }; KCSKNNShiny = derive2 { name="KCSKNNShiny"; version="0.1.0"; sha256="13gzqf3g7vj8cc0xm5902q7lad2way8d0ri1fs01dnv97wmwbxvn"; depends=[caret dplyr FNN rhandsontable shiny]; }; KCSNBShiny = derive2 { name="KCSNBShiny"; version="0.1.0"; sha256="1lv5r9qyvr3dnvcs00jyam0whv64qmv5vphhijlar1xa1g1llwqr"; depends=[caret dplyr e1071 rhandsontable shiny]; }; KDViz = derive2 { name="KDViz"; version="1.3.1"; sha256="1if4lkq9kvncqw56j7m9kh4piph091zkivvnhxzxj72zq661q5br"; depends=[htmlwidgets igraph mpa networkD3 rvest stringr tm xml2]; }; @@ -2065,9 +2077,9 @@ in with self; { KMgene = derive2 { name="KMgene"; version="1.2"; sha256="1yj9l1mqhvyhicyycnkd639q3zkrx15ba11z9911l4c0gql8syf1"; depends=[CompQuadForm coxme kinship2 MASS Matrix mgcv nlme survival]; }; KMsurv = derive2 { name="KMsurv"; version="0.1-5"; sha256="0hi5vvk584rl70gbrr75w9hc775xmbxnaig0dd6hlpi4071pnqjm"; depends=[]; }; KNNShiny = derive2 { name="KNNShiny"; version="0.1.0"; sha256="16zm8bhdivaap3mvhdx2qn1b1j2iqyarclb0y2qd1n4viwcfm9c1"; depends=[caret dplyr e1071 FNN psycho rhandsontable rmarkdown shiny]; }; - KODAMA = derive2 { name="KODAMA"; version="1.5"; sha256="1pb7qba7dp25x4znhvihc21z5jk6bgk6sg0v24gbvqhv5irm7kwf"; depends=[Rcpp RcppArmadillo]; }; + KOBT = derive2 { name="KOBT"; version="0.1.0"; sha256="0dw6s68x95d4z5a6p8bs1368jcxv5jx0wd87js28i2qm3q57ss71"; depends=[glmnet knockoff MASS Rdpack spcov xgboost]; }; KOGMWU = derive2 { name="KOGMWU"; version="1.2"; sha256="1vz0099gp1r10n7w4p480l8rswdw100sns196d9xin2ibmmd2fx9"; depends=[pheatmap]; }; - KONPsurv = derive2 { name="KONPsurv"; version="1.0.2"; sha256="0ylydb4qxf7apklgn8a2sjid92gfbswpn2fyhjjh9f972bg1vdmi"; depends=[Rcpp survival]; }; + KONPsurv = derive2 { name="KONPsurv"; version="1.0.3"; sha256="1qijx7b6idjy23kqb5l58l6nc6dh35vrkxv370qpj3y2gvvn9d6x"; depends=[Rcpp survival]; }; KRIG = derive2 { name="KRIG"; version="0.1.0"; sha256="1hpmjzzrh5b042xh14dgxvn5x5ini63vq5jz1i6rjgvsdf734f98"; depends=[Rcpp RcppArmadillo Rdpack]; }; KRIS = derive2 { name="KRIS"; version="1.1.1"; sha256="0v2xgdwd8lp399il6grjkysq2gj38fmjlxlvg5ciq3g3cp7cdy3m"; depends=[rARPACK]; }; KRLS = derive2 { name="KRLS"; version="1.0-0"; sha256="1zyf3smfzfm3n43i35rlj1w6vcip2hxkvk4f8lp77xbsry0gmwjw"; depends=[]; }; @@ -2076,7 +2088,7 @@ in with self; { KSEAapp = derive2 { name="KSEAapp"; version="0.99.0"; sha256="1gfgpa2d32y6bzvf4ww70sm7niq34sqmyrhi0phlqxshqq9xviqc"; depends=[gplots]; }; KSPM = derive2 { name="KSPM"; version="0.2.0"; sha256="0gysb4qb60xfixyj4slcxs2j1bn57vbq6j08i5ldfr9vfaf1pk0n"; depends=[CompQuadForm DEoptim expm]; }; KScorrect = derive2 { name="KScorrect"; version="1.4.0"; sha256="1khvwc610yp3fd4fn0wcgqpzxg9g7sicjjmwvfcahs8qxn3m5vfa"; depends=[doParallel foreach iterators MASS mclust]; }; - KSgeneral = derive2 { name="KSgeneral"; version="0.1.1"; sha256="1ldk3fvwbr6hw7x3ydgzixgc41a0fbbic699zjlnpj5x4mjg1qby"; depends=[dgof MASS Rcpp]; }; + KSgeneral = derive2 { name="KSgeneral"; version="0.1.2"; sha256="15h65pkkdkakqc86vh90qx2ny9pfmd2pm5vc3qrb797l4b02mqqc"; depends=[dgof MASS Rcpp]; }; KTensorGraphs = derive2 { name="KTensorGraphs"; version="0.2"; sha256="1851cqsn8ghp29hjp3806hl66lqjnz3d69qkmpcmk5nky426ypdr"; depends=[]; }; KappaGUI = derive2 { name="KappaGUI"; version="2.0.2"; sha256="0vklny804xpd9r60j4a01j2gak8jizwjw0abf7yvbcalv3zbpb3k"; depends=[irr shiny]; }; KappaV = derive2 { name="KappaV"; version="0.3"; sha256="13mmfb8ijpgvzfj20andqb662950lp9g25k5b26r5ba65p7nhva7"; depends=[maptools PresenceAbsence rgeos sp]; }; @@ -2085,19 +2097,20 @@ in with self; { KenSyn = derive2 { name="KenSyn"; version="0.3"; sha256="0s8sq3caxn4swac81196dp52r9lbmxb3ni45yaxh53f5g34slsi8"; depends=[lme4 metafor nlme]; }; Kendall = derive2 { name="Kendall"; version="2.2"; sha256="0z2yr3x2nvdm81w2imb61hxwcbmg14kfb2bxgh3wmkmv3wfjwkwn"; depends=[boot]; }; KernSmooth = derive2 { name="KernSmooth"; version="2.23-16"; sha256="1acrkbdn3a74y4dndkcdl1njnpfqz7gk3bsz03g8lfj8l7z53hmq"; depends=[]; }; - KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.2"; sha256="1dm3j779y630hxdlxycwha563i3n9viil2ksq49s7m65bnwhj33k"; depends=[plotrix Rcpp rgl]; }; + KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.4"; sha256="0qqlmcd04m89pmhrbmxxx4lzzb6sksgrm0j8x7fs5r0sxdqy6rcp"; depends=[plotrix Rcpp rgl]; }; KernelKnn = derive2 { name="KernelKnn"; version="1.1.0"; sha256="1w8k4b2q5bh0kx72ixrdb43aificl991j1akh00xn1zx3gbrjb0p"; depends=[Rcpp RcppArmadillo]; }; - Kernelheaping = derive2 { name="Kernelheaping"; version="2.2.1"; sha256="1mc3jzgmg8gyxs6kk474yz911abqzigxwjwjrmhipc40rrdmmr2z"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; + Kernelheaping = derive2 { name="Kernelheaping"; version="2.2.2"; sha256="1aq1yhbs07wl5rjz4v5b8k8brap4p25f76qwr5cif655fxdzxc20"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; }; Knoema = derive2 { name="Knoema"; version="0.1.16"; sha256="0v6w8rrw8nd4l1by5w9xd4hbxp55cma89kljha47ykvmnflsrjsc"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; }; KnowBR = derive2 { name="KnowBR"; version="2.0"; sha256="0i934gff8ldg0lm5cfcf3ip7abnparaaviq8avs7cbnacs6nw8i1"; depends=[fossil mgcv plotrix sp vegan]; }; KnowGRRF = derive2 { name="KnowGRRF"; version="1.0"; sha256="0nk0baibd184rsg23jx1wg4c2fcaqf8ww7822xrs3w5ym6vwd0rs"; depends=[MASS PRROC randomForest RRF]; }; - KoNLP = derive2 { name="KoNLP"; version="0.80.2"; sha256="1i2f684gsgdmmiricrlc8zgzhxk1r0smyzn08jbhfaxkf7adyczy"; depends=[devtools hash rJava RSQLite Sejong stringr tau]; }; KoulMde = derive2 { name="KoulMde"; version="3.1.0"; sha256="158lg1jr3lgn85wgdxww6nldy9blxnnjry6hwkp6kcjpg9jljjl8"; depends=[expm Rcpp RcppArmadillo]; }; Kpart = derive2 { name="Kpart"; version="1.2.2"; sha256="02df0pr8a0gm8558gbw9svxf5sybmg27grymy71ar9hjnhw5xlf2"; depends=[leaps]; }; KraljicMatrix = derive2 { name="KraljicMatrix"; version="0.2.1"; sha256="0yzilmiiyzd2x3v0cnjphf0wdwiblh37kgrvmfrdy49qly48pvi2"; depends=[dplyr ggplot2 magrittr tibble]; }; KrigInv = derive2 { name="KrigInv"; version="1.4.1"; sha256="0x12xff7lgr1v2243shfz9a8r02qs56p7i0b8j2s6bmrzj1abrwb"; depends=[anMC DiceKriging mvtnorm pbivnorm randtoolbox rgenoud]; }; + Kurt = derive2 { name="Kurt"; version="1.0"; sha256="03ivbvgkw3irmcv41zp1wcqzykz81pvvnh39b20qhbgrai2yln79"; depends=[expm labstatR matrixcalc polynom]; }; L0Learn = derive2 { name="L0Learn"; version="1.2.0"; sha256="17k006nxn9n66nh6nrnhv24p150s7icbhzsaimjidj7hx2c24lms"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2]; }; + L1mstate = derive2 { name="L1mstate"; version="1.0"; sha256="04gw078zyzpmnrxibqz27gf4dgyhhcn6lg15w10c6la079vfixx2"; depends=[colorspace MASS Matrix mstate Rcpp RcppEigen]; }; L1pack = derive2 { name="L1pack"; version="0.38.19"; sha256="09n1045lsx1ap47mhzcqghmwwhj24kvpjjr3ysprj058jp5g7ri0"; depends=[]; }; LAGOSNE = derive2 { name="LAGOSNE"; version="2.0.1"; sha256="1lay0zb24k5ms4nfr62pgpriy7nfafnkdjjrd7xxznsi7dqrav0y"; depends=[curl dplyr lazyeval magrittr memoise progress purrr rappdirs rlang sf stringr tibble tidyr]; }; LAM = derive2 { name="LAM"; version="0.4-17"; sha256="1isvhmrrpaamahwkxxsgyq6gbzcvfsk2s4ccjavnab4p79j0x782"; depends=[CDM Rcpp RcppArmadillo sirt]; }; @@ -2111,16 +2124,16 @@ in with self; { LCAvarsel = derive2 { name="LCAvarsel"; version="1.1"; sha256="0aqc9rbrc8n6s9xllmamby219qsnxd4ajvffjr21qlkhkaklirb1"; depends=[doParallel foreach GA MASS memoise nnet poLCA]; }; LCF = derive2 { name="LCF"; version="1.7.0"; sha256="1n5gwnkj26b7w6bzapda049bd4aqb317cip05nf0vy04xjc8giyc"; depends=[quadprog]; }; LCFdata = derive2 { name="LCFdata"; version="2.0"; sha256="1x3vbr6hdviqvd6dxn1kb449g0q5zkfmjsmr5nxd2g82p69lv3xm"; depends=[]; }; - LCMCR = derive2 { name="LCMCR"; version="0.4.3"; sha256="1pzavzlr3fml4chrh0fmj8688a3xa153w5gp404nx3qld5sizqrm"; depends=[]; }; + LCMCR = derive2 { name="LCMCR"; version="0.4.11"; sha256="11vcqjjlcps3nqfrmncfqdadhrwk7fvrnx6xqwnc6l12hr98hic0"; depends=[]; }; LCox = derive2 { name="LCox"; version="0.1.0"; sha256="1cqkqmi6bkd41xxwqqzpdiwdv8m5nrqz3f6cajnnbmgfcjawmrzq"; depends=[fdapace survival]; }; - LDATS = derive2 { name="LDATS"; version="0.2.4"; sha256="1glzg2v8fmbmx9rv4smsy3fcswg8kdhh3g21m1lzld50nlvg2w1f"; depends=[coda digest dplyr extraDistr here lubridate magrittr memoise mvtnorm nnet progress reshape topicmodels viridis]; }; + LDATS = derive2 { name="LDATS"; version="0.2.6"; sha256="1vswk00ih65fz6578x23cacfi7zby299l6cwq1z3gn034cms75za"; depends=[coda digest extraDistr lubridate magrittr memoise mvtnorm nnet progress topicmodels viridis]; }; LDAvis = derive2 { name="LDAvis"; version="0.3.2"; sha256="1y9wd379rfv3rd3f65ll21nvh6i8yafvv11f8gw8nn06194dgfzg"; depends=[proxy RJSONIO]; }; LDOD = derive2 { name="LDOD"; version="1.0"; sha256="0mf2sy01yv57mqicrz08a17m6crigklx6fmw9zpxv7g85qw1iq4v"; depends=[Rmpfr Rsolnp]; }; LDPD = derive2 { name="LDPD"; version="1.1.2"; sha256="1khdx8vwlpliyjc4sxcdiywbxl8lc9f5s3457vcip1j8dv537lbm"; depends=[MASS nleqslv]; }; LDRTools = derive2 { name="LDRTools"; version="0.2-1"; sha256="05srfyplsypi3whfa71lx7pnad23irpf0p7rxmrpv28jgdmrz6wf"; depends=[]; }; LDcorSV = derive2 { name="LDcorSV"; version="1.3.2"; sha256="0lvk3xz400yd3w0cjdfi6hir1ym1mffd504vycwgck5fkzljpcvx"; depends=[]; }; LDheatmap = derive2 { name="LDheatmap"; version="0.99-7"; sha256="1r0j8bihi5z1x0sgaf7dwzpsw9i0nc1vylvipvc0cia2ka1lr9dc"; depends=[genetics Rcpp snpStats]; }; - LDlinkR = derive2 { name="LDlinkR"; version="1.0.1"; sha256="1k7g7z78fs2pjx436x9z0ikldk0ma9yl503xbx5xwpmw9q6c769k"; depends=[httr]; }; + LDlinkR = derive2 { name="LDlinkR"; version="1.0.2"; sha256="0143g41hcljqsfngly56g47pc2pj5xc3myyqia1akxrlwpzdlh7h"; depends=[httr]; }; LDtests = derive2 { name="LDtests"; version="1.0"; sha256="1jwqr7zlp9hv7vw8xp80xvrwbdv796wjgr914v393wfa07j5wbd1"; depends=[]; }; LEANR = derive2 { name="LEANR"; version="1.4.9"; sha256="053xy13ys5hibafdnbkwqdk36hw7dhanp4frfacpfpn5f9nfh95r"; depends=[foreach igraph]; }; LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; }; @@ -2148,7 +2161,7 @@ in with self; { LOST = derive2 { name="LOST"; version="1.3"; sha256="01ymnczsnfml04hb6hbi041khkz2aki78qr3hriw7n3bzs5i7xim"; depends=[e1071 gdata MASS miscTools pcaMethods rgl shapes]; }; LPBkg = derive2 { name="LPBkg"; version="1.2"; sha256="1pgv6cb7m2j7qnrzybnv6x67a3ry8kpvisqj86rvxzclc9q56fdn"; depends=[Hmisc orthopolynom polynom]; }; LPCM = derive2 { name="LPCM"; version="0.46-3"; sha256="1bm5y95lzwcv8arlh55sy17m6hz1x48bcjkrwf3x34ax90qimf66"; depends=[]; }; - LPGraph = derive2 { name="LPGraph"; version="2.0"; sha256="1d3czxihaz3f09bfb34knqb6prhcx50kh8y4qrhhakic999z6ifw"; depends=[car PMA SDMTools]; }; + LPGraph = derive2 { name="LPGraph"; version="2.1"; sha256="1d2kslravi3v9kf6sdabwfpa9s9xxqj3s3d7f7qfcrpfydqixq1q"; depends=[car PMA]; }; LPKsample = derive2 { name="LPKsample"; version="2.0"; sha256="1jg99025vk42rnjdymh3nj71npn4pmdsmk6rvnx3lykpi72f85dz"; depends=[apcluster igraph mclust]; }; LPM = derive2 { name="LPM"; version="2.8"; sha256="0a4cf7chjyfwp1s8dfyfgbm2k6nybfmfh4bhz8b8pfj1an68bdr6"; depends=[fracdiff MASS powdist]; }; LPRelevance = derive2 { name="LPRelevance"; version="2.1"; sha256="0hcg8yl6l8r0aybprrn0zi8mkwp2wldbh53w9dagfrpnz5la05qa"; depends=[BayesGOF Bolstad2 ggplot2 leaps locfdr polynom reshape2]; }; @@ -2158,11 +2171,11 @@ in with self; { LPWC = derive2 { name="LPWC"; version="1.0.0"; sha256="0jgz8rkhhsdiwz7jq568axcsfwlkzdpwssr76zx33r0gz6mf3lln"; depends=[nleqslv]; }; LPmerge = derive2 { name="LPmerge"; version="1.7"; sha256="1wf7hfj670pnzzxyqm3vwrbrvxdbyprh42s5vpv4y54a0w4nr83g"; depends=[Matrix Rglpk]; }; LPower = derive2 { name="LPower"; version="0.1.1"; sha256="00sabp2snfm0175c0cfyv83yd1zb3b8h2wrr7yxgkmr4i3py1fn7"; depends=[MASS nlme]; }; - LRQMM = derive2 { name="LRQMM"; version="1.2.0"; sha256="0v8jxpg1rpr9fm9069zh8846z5l0ad71i229pvsilvdrn1m4vf3l"; depends=[corpcor GeneticsPed kinship2 Matrix MCMCglmm quantreg SparseM sparsesvd]; }; + LRQMM = derive2 { name="LRQMM"; version="1.2.1"; sha256="1lwhswzi1zn9yiqv9dgn5m6m03wwagldm2n804cwxdfq96c9vhcb"; depends=[corpcor GeneticsPed kinship2 Matrix MCMCglmm quantreg SparseM sparsesvd]; }; LRTH = derive2 { name="LRTH"; version="1.3"; sha256="08vakwb7ca7956gifynzijka441yyx0wd5bq5jfhz56lzcxgfb99"; depends=[]; }; LRcontrast = derive2 { name="LRcontrast"; version="1.0"; sha256="0fs06p853r42nws2camvs87py39hb1ssxhfm6d5n9kkq81snfx4q"; depends=[DoseFinding]; }; LS2W = derive2 { name="LS2W"; version="1.3.4"; sha256="1h4vvl1gfxkdjmy6syl0gf4fv03xxxw82cxwvy10b40sf20lwmnv"; depends=[MASS wavethresh]; }; - LS2Wstat = derive2 { name="LS2Wstat"; version="2.1-1"; sha256="0y9di5n8ls4xzw0yrh0kx8c73s4wf1kzdyy8ssk6garvjln9dn9v"; depends=[geoR LS2W matrixStats RandomFields spdep]; }; + LS2Wstat = derive2 { name="LS2Wstat"; version="2.1-2"; sha256="1rgca2np80m0jqdsp69xys3h6x1sz0jirl3gmww8mcls5gk4v30v"; depends=[LS2W matrixStats RandomFields spdep]; }; LSAfun = derive2 { name="LSAfun"; version="0.6.1"; sha256="1q43ds1779w4m4al8brqj4h4y7ys5q5ysw7jbdrxdrw4lwdh7qlf"; depends=[lsa rgl]; }; LSAmitR = derive2 { name="LSAmitR"; version="1.0-2"; sha256="15qyij193scrvc1ghcssr6qdzxc4l4qh199s09bz5hvr62zwfdgb"; depends=[Hmisc lme4]; }; LSC = derive2 { name="LSC"; version="0.1.5"; sha256="1nlnwqb24sbgvl96azh8a833ij5xknjr2wr8shs59lm2n63a3ql9"; depends=[fields gam LICORS Matrix RColorBrewer]; }; @@ -2173,7 +2186,6 @@ in with self; { LSPFP = derive2 { name="LSPFP"; version="1.0.0"; sha256="074qd7zxa54cawipmba1khb6hyrkg553vc25gf2z0ydyv14shm0w"; depends=[bit64 data_table R_utils RCurl seqinr tcltk2]; }; LSRS = derive2 { name="LSRS"; version="0.2.0"; sha256="0p70v5vbxi1rf055mqgsp8v0lxnaj53bmbghli1764yn3x1k3iw6"; depends=[]; }; LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; }; - LTR = derive2 { name="LTR"; version="1.0.0"; sha256="15g5hbrwhab80sarbjgwzvsn6c4fl18h014kz5fpzf0n1rijybik"; depends=[]; }; LTRCtrees = derive2 { name="LTRCtrees"; version="1.1.0"; sha256="07mvbk3hwl240r46ahha0a4fzq96awk963zl8dhky51b6abp83gz"; depends=[icenReg inum partykit rpart survival]; }; LUCIDus = derive2 { name="LUCIDus"; version="1.0.0"; sha256="1gkbfb7gnlk19iy7wnls80h3mqa0y13fld1l5ivhskr7sjlla2q0"; depends=[boot doParallel foreach glasso glmnet lbfgs Matrix mvtnorm networkD3 nnet]; }; LVGP = derive2 { name="LVGP"; version="2.1.5"; sha256="03sd777s16nv04ikn9b3rj67ad6n4bwi0rycc7wqdnq0dx6xgniy"; depends=[lhs randtoolbox]; }; @@ -2181,7 +2193,7 @@ in with self; { LZeroSpikeInference = derive2 { name="LZeroSpikeInference"; version="1.0.3"; sha256="15x29afaq13iwlj66h97k3kczg9rfgp6i9d76rji58hfgh8i8by6"; depends=[]; }; LaF = derive2 { name="LaF"; version="0.8.0"; sha256="1nasj0502i0dbzqgm1pdvmc0wj1hk2q5fzanpcsh7zslsikiqxyq"; depends=[Rcpp]; }; LabRS = derive2 { name="LabRS"; version="0.1.0"; sha256="1a9qafimia83qldsif5wfqx273mvqbx22p5i0hg8n4jvj4vzpy2w"; depends=[knitr]; }; - LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.2.3"; sha256="0pi1f25mgqp9sxbxsjv8335bi70cinnvapzwp8m2mfizcpbqw9hq"; depends=[data_table maptools rgdal rgeos sp spdep]; }; + LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.2.4"; sha256="0xm6rn8r5z3b04zd7gdrclhzmqcvqxyyjlch5npdyq8sbfd163hh"; depends=[data_table maptools rgdal rgeos sp spdep]; }; LadR = derive2 { name="LadR"; version="1.0.6"; sha256="14n58y1p14wwxwwrbdqv2kkplma8ficpqx8nd22qp931idijpsji"; depends=[L1pack]; }; LagSequential = derive2 { name="LagSequential"; version="0.1.1"; sha256="1i8h4acfx21r0kxbg4i0k48kvhwy2abri191wp4b22amhz4vqyyd"; depends=[]; }; Lahman = derive2 { name="Lahman"; version="7.0-1"; sha256="02f4402nsx3fr31j34lwc0jrygqwznzynn2c11nilgw5bcb29gh9"; depends=[dplyr]; }; @@ -2190,7 +2202,7 @@ in with self; { LambertW = derive2 { name="LambertW"; version="0.6.4"; sha256="09ygalklv0d767nwziqwaxa7h517rzqgaznmb04q43122x2gwb3k"; depends=[ggplot2 lamW MASS RColorBrewer Rcpp reshape2]; }; Langevin = derive2 { name="Langevin"; version="1.2.1"; sha256="1bl7145585z173jv8y6f36ba29q1iq29anm44bdq9hcpql235ihy"; depends=[Rcpp RcppArmadillo]; }; LaplaceDeconv = derive2 { name="LaplaceDeconv"; version="1.0.4"; sha256="0n56cmrb536j1vmfizzag1x8wm68c2znpclwbdl8qraqzp8rmffx"; depends=[orthopolynom polynom]; }; - LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.1.1"; sha256="0xxx8967v015fy56m0hqfnr1mwgisj8ximdl05bs28ymzvdx37kp"; depends=[]; }; + LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.1.4"; sha256="1nv1kx86cg8f2s8q15pzskc0lg94bb250p0fhybrx5sjqv1s2lj1"; depends=[]; }; LassoBacktracking = derive2 { name="LassoBacktracking"; version="0.1.2"; sha256="1z1cnj6r6cq3b8xa9qck3ijfmzsr70r2p9m1ndakijb36pgwrzcs"; depends=[Matrix Rcpp]; }; LassoNet = derive2 { name="LassoNet"; version="0.8.3"; sha256="02m0g078wg9ka3ck92nrpqrm3msw1m7r8k43brcaiffqwhky99vy"; depends=[Rcpp]; }; LassoSIR = derive2 { name="LassoSIR"; version="0.1.1"; sha256="0ap8335ms12nsc7jvd48244zya54w05wj91qkhb0i63730r508c3"; depends=[glmnet]; }; @@ -2205,7 +2217,6 @@ in with self; { LearnBayes = derive2 { name="LearnBayes"; version="2.15.1"; sha256="0ch54v2zz2yyyk0lvn5rfikdmyz1qh9j1wk3585wl8v58mc0h4cv"; depends=[]; }; LearnGeom = derive2 { name="LearnGeom"; version="1.4"; sha256="0qalhy4g47ik8cq2m1zajhv79rla8g72dmcwhnizwn6afhm6fnpm"; depends=[]; }; LearningRlab = derive2 { name="LearningRlab"; version="1.3"; sha256="14q8pm51yrfpny2wg5l0x02zibh7qn11zkg51igadq3r6256rfd1"; depends=[crayon magick]; }; - LendingClub = derive2 { name="LendingClub"; version="2.0.0"; sha256="13qh5p4ksvgd1pmc4mdp8p44ra34fvp3s5p5vhlkpclkv5d4mxq2"; depends=[dplyr httr jsonlite plyr readr]; }; LexisNexisTools = derive2 { name="LexisNexisTools"; version="0.3.0"; sha256="19fcyvq2gs6iyks5x2s0xvbxqzvh9h7hpympvyrsx4026zv8x5cz"; depends=[data_table pbapply quanteda stringdist stringi tibble]; }; LexisPlotR = derive2 { name="LexisPlotR"; version="0.4.0"; sha256="0vlm8wcaj3755cbxrfb7ybla9znd2cbklw2xwyyn6r9i4c9xsfih"; depends=[dplyr ggplot2 tidyr]; }; LiblineaR = derive2 { name="LiblineaR"; version="2.10-8"; sha256="17ykazac7iv02bxl8xg948vhbdr32icdm1v4bk31zmslp4xsk08g"; depends=[]; }; @@ -2216,7 +2227,7 @@ in with self; { LightningR = derive2 { name="LightningR"; version="1.0.2"; sha256="1va673aw2hgir8ybbjad6dhbs8izs1z4jcikwa7qp3mkv0zqd0vq"; depends=[httr R6 RCurl RJSONIO]; }; LilRhino = derive2 { name="LilRhino"; version="1.2.0"; sha256="1d1mg77k67b5ddlp41haygagash48b6jy30q20lb231lbiss9ncp"; depends=[beepr data_table dplyr e1071 fastmatch FNN ggplot2 keras neuralnet readr SnowballC stringi textclean tm]; }; LinCal = derive2 { name="LinCal"; version="1.0"; sha256="1xr9jnna20hh78dh9wjg70jm8fhaxvdwql894kdp0y5h4pchkdph"; depends=[]; }; - LinRegInteractive = derive2 { name="LinRegInteractive"; version="0.3-2"; sha256="0axczfd71i62bi82spraf3s780yq47p3gb0kpicgdnnmbrj683rl"; depends=[rpanel xtable]; }; + LinRegInteractive = derive2 { name="LinRegInteractive"; version="0.3-3"; sha256="1rkxvkv3ls0cgqcvs74dy6qabh62cjc0xh89dlk88bpc8mz76k8z"; depends=[rpanel xtable]; }; LindenmayeR = derive2 { name="LindenmayeR"; version="0.1.13"; sha256="01wnvmxdb91ai21h3plgsmy6ds7564s5wq2xyr905ma4a2d8afn5"; depends=[stringr]; }; LindleyPowerSeries = derive2 { name="LindleyPowerSeries"; version="0.1.0"; sha256="1nylsmxx1s6g5dzz69kaqccx3c7hzb49jan22b94816pnzd0k7zp"; depends=[lamW]; }; LindleyR = derive2 { name="LindleyR"; version="1.1.0"; sha256="163i604q683znp6q544hnv4vibygwvsxcfhh8m7iaqr42li3c0ak"; depends=[lamW]; }; @@ -2265,7 +2276,7 @@ in with self; { MAP = derive2 { name="MAP"; version="0.1.3"; sha256="19d0m30jh50ibbdgvcvq1vsz5i1vf8qvl0d0nbqklvnndch61jhk"; depends=[flexmix Matrix]; }; MAPA = derive2 { name="MAPA"; version="2.0.4"; sha256="02s223s58k2jk49m0xlz3q9m3nip3h4dl4v58j18z2vgi54dwnjr"; depends=[forecast RColorBrewer smooth]; }; MAPLES = derive2 { name="MAPLES"; version="1.0"; sha256="0hzsh7z1k7qazpxjqbm9842zgdpl51irg7yfd119a7b2sd3a8li9"; depends=[mgcv]; }; - MARSS = derive2 { name="MARSS"; version="3.10.10"; sha256="03kkg6slq3z12saw0vf6z9wqadzpy4yjh9bm47zl4av4pj03y6lr"; depends=[KFAS mvtnorm nlme]; }; + MARSS = derive2 { name="MARSS"; version="3.10.12"; sha256="09b0q9aq1y4nrgpvr1xkzibv5xf9qdcaxlz02zl9sv4x1zmpi80w"; depends=[KFAS mvtnorm nlme]; }; MARX = derive2 { name="MARX"; version="0.2"; sha256="1rc87hz719khl8mclbkfdix499nsc4nyihaaavd73nany7iprm02"; depends=[fBasics matlab metRology stabledist tseries]; }; MASS = derive2 { name="MASS"; version="7.3-51.5"; sha256="1k0m7pa4gb5apzrrkb5kx5d7bmkm2pl5g15vwb6j067hrqahck26"; depends=[]; }; MASSTIMATE = derive2 { name="MASSTIMATE"; version="1.4"; sha256="1lpmpxgqnczlizx5gwgw96kxqkjqvbjqwf373zkvfmax2pfqr6dn"; depends=[]; }; @@ -2285,8 +2296,8 @@ in with self; { MBESS = derive2 { name="MBESS"; version="4.6.0"; sha256="1fc2zcjfk9k107bl3fs3wf8fxxrcpwyhiz7j1iv3w6zqf2l4fb88"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; }; MBHdesign = derive2 { name="MBHdesign"; version="2.1.6"; sha256="188kx7594qsxq5wnkpzh3xm6rjvsyj5r4hv8kqaa2mcqp5730k1j"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; }; - MBNMAdose = derive2 { name="MBNMAdose"; version="0.2.4"; sha256="0d5fi1i2sr39z5fdl303rjhxvp5h622zbkpfsv3yjq4vp0ymwka0"; depends=[checkmate dplyr magrittr R2jags Rdpack reshape2 rjags scales]; }; - MBNMAtime = derive2 { name="MBNMAtime"; version="0.1.2"; sha256="13742y17aclqbsbc039vlnmrg5sa1y6kjsdayl8ii9xnhbb5f48l"; depends=[checkmate dplyr magrittr R2jags Rdpack reshape2 rjags]; }; + MBNMAdose = derive2 { name="MBNMAdose"; version="0.2.7"; sha256="1r8gz0kpkmgs1czyzwrv018l0z8gypwjdd4gmwbbhhaj84fr3gni"; depends=[checkmate dplyr magrittr R2jags Rdpack reshape2 rjags scales]; }; + MBNMAtime = derive2 { name="MBNMAtime"; version="0.1.3"; sha256="1yyynsdgxdw3zfv0byxbjli332wc3bm8pfhrcy4rsvvvhj458vy7"; depends=[checkmate dplyr magrittr R2jags Rdpack reshape2 rjags]; }; MBSGS = derive2 { name="MBSGS"; version="1.1.0"; sha256="1h5vhmpgrqza12j7ivhwgd5wyb7kkb8mjbxl5w756vyid8g03flz"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; }; MBSP = derive2 { name="MBSP"; version="1.0"; sha256="0mds6jfqgmnm4saqqqqqfcg8zh4qsvd2503g3ij1sn70f0aakwaj"; depends=[coda GIGrvg MASS Matrix MCMCpack]; }; MBmca = derive2 { name="MBmca"; version="0.0.3-5"; sha256="0p7ddpsy4hwkfwyyszidi33qpdg4xllny7g9x24gk782p7kjfgq9"; depends=[chipPCR robustbase]; }; @@ -2301,23 +2312,25 @@ in with self; { MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.3"; sha256="0b9n793spljmsb58jp41vnl9c753xqaw1g4wbi4ax348cvi09jk8"; depends=[coda ggplot2 MCMCglmm]; }; MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; }; MCMCglmm = derive2 { name="MCMCglmm"; version="2.29"; sha256="1d37rk10zi2yymsxif9091z9lnav7p4cazjfq29fhj90x8vpifhk"; depends=[ape coda corpcor cubature Matrix tensorA]; }; - MCMCpack = derive2 { name="MCMCpack"; version="1.4-5"; sha256="1dfz3impsb70nq7qyk5aj5ixslj2zvwcl1mfqvqzy6zp8kx9r56s"; depends=[coda lattice MASS mcmc quantreg]; }; + MCMCpack = derive2 { name="MCMCpack"; version="1.4-6"; sha256="1ivkm35hkfxgd67hbsga7mghki6np4cfmg719s2sd2d5dy6h3kbb"; depends=[coda lattice MASS mcmc quantreg]; }; MCMCprecision = derive2 { name="MCMCprecision"; version="0.4.0"; sha256="0r0qchiv61sk3drrb0rhwsk55gci4w343hd2gsvclrlyb8r9qhaf"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; MCMCtreeR = derive2 { name="MCMCtreeR"; version="1.1"; sha256="00r6f62h7ryil7qxd25icvkqypjjssjsrz4i5sbqsnw5cdy5al8z"; depends=[ape coda sn]; }; MCMCvis = derive2 { name="MCMCvis"; version="0.13.5"; sha256="0pgihhmizp8dq9fb23ln2m2rbj97r2433n16krji3cm9ji33wndd"; depends=[coda overlapping rstan]; }; MCPAN = derive2 { name="MCPAN"; version="1.1-21"; sha256="0q1m0xg8825q9zjwxcz2h2n0dyr21q5bk29qbqpdhirlwm6f1a51"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; - MCPMod = derive2 { name="MCPMod"; version="1.0-10"; sha256="0ns74qhm9bzi70m9bn61zs4mmqmmxxi77f49pdrcnr8wrrnn1kdn"; depends=[lattice mvtnorm]; }; - MCPModGeneral = derive2 { name="MCPModGeneral"; version="0.1-0"; sha256="1660r7ibgj5jl5nf3p11911n8k3wbnnzagapn73f2g5racwrbx1d"; depends=[DoseFinding MASS]; }; + MCPMod = derive2 { name="MCPMod"; version="1.0-10.1"; sha256="0j15dpxy62vwbd6pcsvkbpi1nklh0yjzwf53kcmv4jhj0v6xmpp9"; depends=[lattice mvtnorm]; }; + MCPModGeneral = derive2 { name="MCPModGeneral"; version="0.1-1"; sha256="0izhbiivlb818ak49hl1f7li1chlyrxk5f80cmw4zkim3l6ddaxq"; depends=[DoseFinding MASS]; }; MCS = derive2 { name="MCS"; version="0.1.3"; sha256="1kiz1jq1bm2n8f33nsybp5jfrzzl9xbsi3m9l8818ybmph99xms6"; depends=[]; }; MCSim = derive2 { name="MCSim"; version="1.0"; sha256="1nqry41qa5c02an5fxm3y1g3w1vcqjgsy1an95i3szz1w1ndaj14"; depends=[CircStats MASS]; }; MCTM = derive2 { name="MCTM"; version="1.0"; sha256="14xjfskyrqi0m58lkwjfjpss5j7wy3ajr148n526czrrpccg108j"; depends=[]; }; MChtest = derive2 { name="MChtest"; version="1.0-3"; sha256="1b3p6ry8gkvyphakn3504ibl2x8dbhx95saild0mj0iwm3sjyspf"; depends=[]; }; MConjoint = derive2 { name="MConjoint"; version="0.1"; sha256="02yik28mhvd4rfqwrprdbdjx9c49ds55fh042bsjajs2ip467w5c"; depends=[]; }; + MDBED = derive2 { name="MDBED"; version="1.0.0"; sha256="1r3sizb2mqd4pqjy25krwmsjfkr6cl7lkd8db5jn3hgxx3qh6sgc"; depends=[doParallel foreach ggplot2 lattice orthopolynom psych Rdpack]; }; MDFS = derive2 { name="MDFS"; version="1.0.5"; sha256="17ksjgzi8sxyqczscq1rd6a8zgdd0h9sm3c0ymsf0phr69msvpg0"; depends=[]; }; MDMR = derive2 { name="MDMR"; version="0.5.1"; sha256="1pv57xl7pjsqxz1j8mnfmjaa36mlr749yb4c44ppdrx6khvw662x"; depends=[car CompQuadForm lme4]; }; MDPtoolbox = derive2 { name="MDPtoolbox"; version="4.0.3"; sha256="0aaw787fvcyhw6mbl42icgqfdzvfr618vg179984xqifafr40dyc"; depends=[linprog Matrix]; }; MDSMap = derive2 { name="MDSMap"; version="1.1"; sha256="0knrkfwgl763fwdb3ln3g5y3rarnpqdfgzxf4m045664m7gkipsg"; depends=[princurve reshape rgl smacof]; }; MDSPCAShiny = derive2 { name="MDSPCAShiny"; version="0.1.0"; sha256="0qsjx4v9j5p5a7h1g0xk4j5ib1mdrjsy84bglnjdxr9rpqg2m7n5"; depends=[dplyr MASS psych rmarkdown shiny]; }; + MDSS = derive2 { name="MDSS"; version="1.0-0"; sha256="1shksvj31ygkz048jw4zhqy13dq9c9myrxqs7bizv5yxyzk4bi89"; depends=[]; }; MDimNormn = derive2 { name="MDimNormn"; version="0.8.0"; sha256="080m0irx5v8l45fg9ig5yzcj92s3ah8a9aha288byszli1cchgpn"; depends=[]; }; MDplot = derive2 { name="MDplot"; version="1.0.1"; sha256="1xijh18hrkb807nfkdr7g642aspn5psc8nw29q387jl5hly2w8s9"; depends=[gplots gtools MASS RColorBrewer]; }; MED = derive2 { name="MED"; version="0.1.0"; sha256="0fy0qmxirkdz5kigy2r7l5czjzws0fhjxy13kv1kqh628ldrp109"; depends=[]; }; @@ -2337,7 +2350,7 @@ in with self; { MFPCA = derive2 { name="MFPCA"; version="1.3-4"; sha256="18wbas1g848865di96a19kmv0fsnds7cfv81nwhz6l6q8qmlnkf6"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; MFT = derive2 { name="MFT"; version="2.0"; sha256="0n1xws3dw0650037qyqgp600p8cf098qa5hkbncdfdbl0w34qamy"; depends=[]; }; MGBT = derive2 { name="MGBT"; version="1.0.2"; sha256="0jgdy8zw5lx2f567n3livgmwhpfcd1s42mp1bj859jx3z5kiwkiy"; depends=[]; }; - MGDrivE = derive2 { name="MGDrivE"; version="1.1.0"; sha256="16nm47vazd06hvi4k3z86lxilgk8y4b3p44h6cm2b8az90irmj5f"; depends=[data_table R6 Rcpp Rdpack]; }; + MGDrivE = derive2 { name="MGDrivE"; version="1.5.0"; sha256="1dgmmc34m2pj1l2gkwg85sj4rbhhwyrp8cj4m9b9hlz134n3qgwy"; depends=[R6 Rcpp Rdpack]; }; MGL = derive2 { name="MGL"; version="1.1"; sha256="03q453swnangxyc4nvjhzw2zpcy5vp1wpilap5rwymnf0c0xi4j7"; depends=[]; }; MGLM = derive2 { name="MGLM"; version="0.2.0"; sha256="0yyqm53lvp59zy8lkffw9x3zhqrnh29j5v3yyzk6qrgj2slnc7nk"; depends=[]; }; MGMS2 = derive2 { name="MGMS2"; version="1.0.1"; sha256="0pai8cf4czsscsw35plrqldmqryzn6zji41n4a3x73cr00msfxrb"; depends=[MALDIquant MALDIquantForeign]; }; @@ -2354,6 +2367,7 @@ in with self; { MIICD = derive2 { name="MIICD"; version="2.4"; sha256="1xlvhyh3gg77cym10i8hrxm8r1jm4plvny2c4izic6w89snplyq6"; depends=[MASS mstate survival]; }; MIIVsem = derive2 { name="MIIVsem"; version="0.5.4"; sha256="1fb4xnbp6c3c2dx3jhyqw463ghj4ak8jld148dyrmi9031mqv4fy"; depends=[boot car lavaan Matrix numDeriv]; }; MILC = derive2 { name="MILC"; version="1.0"; sha256="14xsiw5al6kixwvf3ph0dlm8s13gsbqvzb92da6ng3x4iiyb1g0w"; depends=[]; }; + MIMSunit = derive2 { name="MIMSunit"; version="0.8.2"; sha256="1fl7lg4f0dbk9sfrh85ay5pmyfyfmxlsrx5y7x0d86ar76nmk5al"; depends=[caTools dplyr dygraphs ggplot2 lubridate magrittr matlab plyr R_utils RColorBrewer readr signal stringr xts]; }; MIPHENO = derive2 { name="MIPHENO"; version="1.2"; sha256="0hcaq66biv4izszdhqkgxgz91mgkjk1yrwq27fx07a2zmzj44sfv"; depends=[doBy gdata]; }; MIXFIM = derive2 { name="MIXFIM"; version="1.1"; sha256="1xx25b7hfyzynfh3vsqrkriqnqnn173gn8j1vwqmc434c1vy4nx2"; depends=[ggplot2 mvtnorm rstan]; }; MImix = derive2 { name="MImix"; version="1.0"; sha256="033gxr0z2xba0pgckiigblb1xa94wrfmpgv3j122cdynjch44j4r"; depends=[]; }; @@ -2362,6 +2376,8 @@ in with self; { MKdescr = derive2 { name="MKdescr"; version="0.5"; sha256="0dgdglr173pjlvbh9kd67pl890pnlzlcfm04ax4bdas6gp1cb6j6"; depends=[ggplot2 scales]; }; MKinfer = derive2 { name="MKinfer"; version="0.4"; sha256="1rs0vjq9d5hhrlw98vxnss4ph8hyqws4wx4wlikfqpp42v96yxl4"; depends=[arrangements boot ggplot2 MKdescr nlme]; }; MKmisc = derive2 { name="MKmisc"; version="1.6"; sha256="0x518icdgq4mrc6qm1flb5lpr9y7j9znh0ah3gw2xsbjiplqd323"; depends=[ggplot2 limma RColorBrewer robustbase scales]; }; + MKomics = derive2 { name="MKomics"; version="0.5"; sha256="0mr0y1ai3jf3jj4dqvs6xv3clgli7d7lzqk8ya6zah388rqmkg9s"; depends=[limma RColorBrewer robustbase]; }; + MKpower = derive2 { name="MKpower"; version="0.4"; sha256="1s9njvdjpqn4i4dxarb9agcdmx9dx1g4icg7mfp8bd6rnslsscn5"; depends=[coin ggplot2 matrixTests MKdescr MKinfer qqplotr]; }; ML_MSBD = derive2 { name="ML.MSBD"; version="1.2.0"; sha256="1dxvvyha984j3h170s2brhbf4lm53f16f12lhnqf3sl4sc0f4xv8"; depends=[ape foreach]; }; MLCIRTwithin = derive2 { name="MLCIRTwithin"; version="2.1.1"; sha256="1x0xmka7kkbjnh3yv4zxxyl17cpmf0rb9hxmdl1srb6ijld4np1b"; depends=[limSolve MASS MultiLCIRT]; }; MLCM = derive2 { name="MLCM"; version="0.4.2"; sha256="14sd9ybwyilympnbyaqmwdrbip4vyn1p93rh9mlxls3bmk6nc4hv"; depends=[]; }; @@ -2376,12 +2392,12 @@ in with self; { MLRShiny = derive2 { name="MLRShiny"; version="0.1.0"; sha256="06zcyz8l4754sjbcql3jd3nq1d2lgj92p5h2bh708z52mww71isw"; depends=[corrgram dplyr forecast psych QuantPsyc shiny shinyAce]; }; MLRShiny2 = derive2 { name="MLRShiny2"; version="0.1.0"; sha256="1ygamp0ldz1i0w2xyi205rpd1gd5asw61l36z06j41ghdyiz1lww"; depends=[corrgram dplyr forecast psych QuantPsyc shiny shinyAce]; }; MLZ = derive2 { name="MLZ"; version="0.1.3"; sha256="0yj9241k3yk8qy6w2q26gwbj9b9qynv3s3jpyfxixvkc9kji3wc2"; depends=[dplyr ggplot2 gplots RcppEigen reshape2 TMB]; }; - MLeval = derive2 { name="MLeval"; version="0.2"; sha256="1dv795x8v78b6kpwdzmy0zlyrhwpf7gdwiss51d2kpp4h74ylsgr"; depends=[ggplot2]; }; + MLeval = derive2 { name="MLeval"; version="0.3"; sha256="1g2w5lrr7199n4zyaalbp9xdgl858hdg1pqr3rpd7v5fmamawc69"; depends=[ggplot2]; }; MLmetrics = derive2 { name="MLmetrics"; version="1.1.1"; sha256="061129b36h7xqw4zsznik694n8yy9qq6aaqfhdxkhdv8n5v1nzvp"; depends=[ROCR]; }; MM = derive2 { name="MM"; version="1.6-5"; sha256="0vi6wp6p48jjfmnspdsnmw0yqz39sjk6nrkxdw7kan5h17h4rwd7"; depends=[abind emulator magic Oarray partitions]; }; MM2S = derive2 { name="MM2S"; version="1.0.6"; sha256="1knr15vjc81cp7j67nc2gwkgds6ar3ribi1h0ihg0ch6rfz5c5zs"; depends=[GSVA kknn lattice pheatmap]; }; MM2Sdata = derive2 { name="MM2Sdata"; version="1.0.3"; sha256="0hlm6jp8jq38vkszwdgpf30w11l1fhpblg26zv05j50a6whpmhqd"; depends=[Biobase]; }; - MM4LMM = derive2 { name="MM4LMM"; version="2.0.1"; sha256="1rmzzfzw1hpsmvgc9pcqqf9k8p4fvdh6pizy4sjvavphqvzjfnj6"; depends=[MASS Matrix Rcpp RcppEigen]; }; + MM4LMM = derive2 { name="MM4LMM"; version="2.0.2"; sha256="0zcaqxz1yxv2lkp39ly4jkl9wk94k7md5ks5wjk9l1qk7k5q7yx9"; depends=[MASS Matrix Rcpp RcppEigen]; }; MMAC = derive2 { name="MMAC"; version="0.1.2"; sha256="1xwz48iizf0lvmhc7krsraabc49ky85qvgr23w4ip6jzfv4sn1jr"; depends=[]; }; MMDai = derive2 { name="MMDai"; version="1.4.0"; sha256="0bb7hg8fkmzg87xr1b2hxhy75xi461ks6w12z85k4c77kswfpx3b"; depends=[DirichletReg]; }; MMDvariance = derive2 { name="MMDvariance"; version="0.0.9"; sha256="1yiqabifym7gdknqrhfnql6qc8p163npzrrckbyqjry3yvkqr5wi"; depends=[Biobase lawstat MASS]; }; @@ -2391,17 +2407,16 @@ in with self; { MMWRweek = derive2 { name="MMWRweek"; version="0.1.1"; sha256="16dwmpj13rzxmd2x7xaakw2zq2aly7ajjbfnc39qvdzk6n2x37wn"; depends=[]; }; MMeM = derive2 { name="MMeM"; version="0.1.0"; sha256="1b0wdcyqnliw85il5vnwy9l4x1z42kirbg872hl47plwfrp9gahc"; depends=[jointDiag lme4 MASS Matrix matrixcalc psych stringr]; }; MNLR = derive2 { name="MNLR"; version="0.1.0"; sha256="0q80232ndp7pkklzqdbga1vf51dmsxaivm4ia4wah32rc2c87fqp"; depends=[caret e1071 nnet rmarkdown shiny]; }; - MNLpred = derive2 { name="MNLpred"; version="0.0.1"; sha256="1h8qnirhvlskhm7zg7h8jbx76r53gywpswxyj4w7gb04qhdkzmhl"; depends=[MASS tibble]; }; + MNLpred = derive2 { name="MNLpred"; version="0.0.2"; sha256="0b3pgy9hqxwzvw61arvz9zlhx1j4fy9qmzwwzxf67b4ybmkzzsgl"; depends=[MASS]; }; MNM = derive2 { name="MNM"; version="1.0-3"; sha256="16b2yrm2kn943vzrr38qhk6qq20a842xv7iiln4is02csijxw2b3"; depends=[ellipse ICS ICSNP SpatialNP]; }; MNP = derive2 { name="MNP"; version="3.1-0"; sha256="06qs2vsmjs6rcpqlwfc1n5y5hzxf7pngbdmiza1wijm9hh54ikh0"; depends=[MASS]; }; MNS = derive2 { name="MNS"; version="1.0"; sha256="0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb"; depends=[doParallel glmnet igraph MASS mvtnorm]; }; - MOCCA = derive2 { name="MOCCA"; version="1.3"; sha256="1ffpnqcrkrr7vh0f1fyyai0c2wq3v8sk2qhnhds49z7p6xrsmh21"; depends=[cclust class cluster clv]; }; + MOCCA = derive2 { name="MOCCA"; version="1.4"; sha256="0g70s7hnmrp4sm8gx49vsijj54y4amlcy6axc4k37k4c9g4sdics"; depends=[cclust class clue cluster]; }; MODIS = derive2 { name="MODIS"; version="1.1.6"; sha256="0nby3j356hglf2hdddqyq8vm99ynwk4wjmqrbjl5k9pr9yjkhda8"; depends=[bitops curl devtools mapdata mapedit maps maptools ptw raster rgdal rgeos sf sp]; }; MODISSnow = derive2 { name="MODISSnow"; version="0.1.0.0"; sha256="1p0mil074gapw6v8paw9595rzp85hxrfsc65llh0ljalmacwgx04"; depends=[gdalUtils lubridate raster RCurl]; }; - MODISTools = derive2 { name="MODISTools"; version="1.1.0"; sha256="0242jxxdkwi39ra160p42psgcgf8alwaij004v29apy03g95rrvd"; depends=[httr jsonlite memoise sf]; }; + MODISTools = derive2 { name="MODISTools"; version="1.1.1"; sha256="0188cffsnpy7nmb0c03i64674xyizx6imkymrwsj3mf9s77wa2v0"; depends=[httr jsonlite memoise raster sf]; }; MODIStsp = derive2 { name="MODIStsp"; version="1.3.9"; sha256="0zjc8q3zi2i0i7l1bmw558sxdcsjba2lh31i428cy9pd886j5jn3"; depends=[bitops data_table gdalUtils gWidgets gWidgetsRGtk2 httr jsonlite pacman raster rgdal rgeos sp stringr xml2 xts]; }; - MOEADr = derive2 { name="MOEADr"; version="1.1.0"; sha256="0q0bm13v85raq5hdfpzg4v5kj12zjh31fr1x0zv9g5blxy10dqgy"; depends=[assertthat FNN]; }; - MOJOV = derive2 { name="MOJOV"; version="1.0.1"; sha256="11mcqxw83z4xx29s34v4rsbb3zvyhlb2lmvf97b77n455gsy5hab"; depends=[aod lattice saws survey]; }; + MOEADr = derive2 { name="MOEADr"; version="1.1.1"; sha256="0aqkqw5ph5rvsgpasc94i264lxapr37gpjhk4rkkynph2gnvq1zx"; depends=[assertthat FNN]; }; MOLHD = derive2 { name="MOLHD"; version="0.2"; sha256="1lrl24x7iig15jwxigvqm3jdwnxkn948sxmywn6zi2b1a5hqz05k"; depends=[arrangements fields]; }; MOQA = derive2 { name="MOQA"; version="2.0.0"; sha256="17w4iwf38k0r2fiwqr420hkbbz1a3r89sqwnd2yn300zmaz64hpr"; depends=[gplots psych readr]; }; MOST = derive2 { name="MOST"; version="0.1.0"; sha256="0nmjx5hsn67hdglcqyanq3az76rs15knv8qy28f8paah5s9w24xf"; depends=[]; }; @@ -2449,20 +2464,22 @@ in with self; { MScombine = derive2 { name="MScombine"; version="1.4"; sha256="0s3gbf3s5mf00d5mkbqhd9wwnyps7qb4r3zbal8j8nsaspql9nd3"; depends=[plyr]; }; MSwM = derive2 { name="MSwM"; version="1.4"; sha256="1zhfar02s7hm4gjs1flkh9a4526d98hik8bqrksy75758baiqg7l"; depends=[nlme]; }; MTA = derive2 { name="MTA"; version="0.2.0"; sha256="1wic2rw63h2daha23fpyw80x7ywjwqq6rj5jg73iankvdg32mlvm"; depends=[cartography igraph sf sp]; }; + MTAR = derive2 { name="MTAR"; version="0.1.0"; sha256="1bq930m7rd1kgn5442p8dcycxi55vgkrmlwssva5w0p5javi4x4a"; depends=[CompQuadForm MASS Matrix seqMeta SKAT]; }; MTDrh = derive2 { name="MTDrh"; version="0.1.0"; sha256="0ass3b90nr4i0y7v30hk8xhq3hj9bxaxcsr4f8wfi0lnvzfv6aaa"; depends=[]; }; MTE = derive2 { name="MTE"; version="1.0.0"; sha256="009mrl9dgxafl4hrgfzvsfvgx3dljb0rbbs74j2cxc5ray87kp55"; depends=[parcor quantreg]; }; MTGS = derive2 { name="MTGS"; version="0.1.0"; sha256="0ijcw730xap5c38k8z4d976azwcnygxaiv2ksrad8j8nnvnh5zbd"; depends=[glmnet kernlab MRCE]; }; MTLR = derive2 { name="MTLR"; version="0.2.1"; sha256="070121qn7vmxmxgvzv7ymhk19j9kxks4xa7qpd8vkc2rp3ara4cp"; depends=[Rcpp RcppArmadillo survival]; }; + MTPS = derive2 { name="MTPS"; version="0.1.9"; sha256="125ja7wz8fz1w7hfxks7qs524vwk86rp459ahxw9cjnn1qxyv38k"; depends=[class e1071 glmnet MASS rpart]; }; MTS = derive2 { name="MTS"; version="1.0"; sha256="09pypanjmqrvxbrrckydxyyswsgjx4nhb052x4llk7va9w4lbcjs"; depends=[fBasics fGarch mvtnorm Rcpp]; }; MTSYS = derive2 { name="MTSYS"; version="1.2.0"; sha256="04dkan3hxl3difflskp7d1lw1bvxhg4s28ssy2v4m7z7wbpj3v1m"; depends=[]; }; MUACz = derive2 { name="MUACz"; version="1.0.0"; sha256="0sh5h2qn769bpp8l09mvh1cabr2j1vywaqbj6fci84h8zx5y55fj"; depends=[dplyr epiDisplay ggplot2]; }; - MUCflights = derive2 { name="MUCflights"; version="0.0-3"; sha256="03ksvv5nyzlqiml1nz405r3yqb2cl35kpm1h61zcv2nqq8cxqshs"; depends=[geosphere NightDay RSQLite sp XML]; }; MUS = derive2 { name="MUS"; version="0.1.6"; sha256="0xid624rz0mvd03iy7ydvmx7gkscvsg4kdbaf2nji54ahai3pmn3"; depends=[]; }; MVA = derive2 { name="MVA"; version="1.0-6"; sha256="09j9frr6jshs6mapqk28bd5jkxnr1ghmmbv6f4zz0lrg81zjizl3"; depends=[HSAUR2]; }; MVB = derive2 { name="MVB"; version="1.1"; sha256="0an8b594rknlcz6zxjva6br8f34sgwdi2jil3xh1xzb5fa55dw0f"; depends=[Rcpp RcppArmadillo]; }; MVLM = derive2 { name="MVLM"; version="0.1.4"; sha256="1zcj405dc4jbiqw6p0fcbam8yc9d6yjpmrx5wjw5zjvig3iqb91k"; depends=[CompQuadForm]; }; MVN = derive2 { name="MVN"; version="5.8"; sha256="1rk8zrf3bavywv4bca1aqsfrirxkvxh5lfwrnj0g8zncd69bd1fc"; depends=[boot car energy kableExtra magrittr MASS moments mvoutlier nortest plyr psych robustbase]; }; MVNBayesian = derive2 { name="MVNBayesian"; version="0.0.8-11"; sha256="1iaxyp480v91887cn4w3l74907wvbzs3ay4cjgzd8xk2dp47w8bg"; depends=[mvtnorm plyr]; }; + MVQuickGraphs = derive2 { name="MVQuickGraphs"; version="0.1.2"; sha256="1937w8y866bsn9kn6a98c91akhm9ddc5dr9wqm51lkbjyz1zm0j1"; depends=[plotrix]; }; MVR = derive2 { name="MVR"; version="1.33.0"; sha256="1ygz47a2p5r5axql5zsxvsn25pcqyxz6mpw50zfmzrcqdrfa3bg8"; depends=[statmod]; }; MVT = derive2 { name="MVT"; version="0.3"; sha256="0vinlv3d5daf8q7pd9xgs51nxz2njgdba5750vygmv883srlzi9d"; depends=[]; }; MVar = derive2 { name="MVar"; version="2.1.1"; sha256="17fj2y739afmdrbhnd2la9qiywcyyk0nr1d8936c63nz8xivvssv"; depends=[MASS]; }; @@ -2474,12 +2491,12 @@ in with self; { MXM = derive2 { name="MXM"; version="1.4.5"; sha256="003068bq8lmc29pc6ac9yaskjiqalvhngacac4fnl705l58zhcyg"; depends=[bigmemory coxme doParallel dplyr energy foreach geepack Hmisc knitr lme4 MASS nnet ordinal quantreg relations Rfast Rfast2 survival visNetwork]; }; MaOEA = derive2 { name="MaOEA"; version="0.5.2"; sha256="1yaa8wr1gr1npqpls5g6mlr9dgjwiyvhk6p1dmjw29f7a4g2cam5"; depends=[e1071 gtools lhs MASS nnet nsga2R randtoolbox reticulate stringr]; }; MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; }; - MachineLearning = derive2 { name="MachineLearning"; version="0.1.3"; sha256="0yvrsqzvx8ss614ixa9mwkg2ig3hmfixm78fi8c3wmpc2frvsqrk"; depends=[arules crayon dplyr formula_tools FSelectorRcpp ggplot2 magrittr NbClust rpart rpart_plot]; }; - MachineShop = derive2 { name="MachineShop"; version="2.0.0"; sha256="0whn6xp5339vbsjfs40lq1kz1pizzaaryfg8bgcscqfr4rlxs3av"; depends=[abind dials foreach ggplot2 kernlab magrittr party polspline recipes rlang rsample Rsolnp survival tibble]; }; + MachineLearning = derive2 { name="MachineLearning"; version="0.1.4"; sha256="0wrngi2gi2fp7f3dhjk6c4318z1wi7l9dj7j7fnlydp5dv86ls8n"; depends=[arules crayon dplyr formula_tools FSelectorRcpp ggplot2 magrittr NbClust rpart rpart_plot]; }; + MachineShop = derive2 { name="MachineShop"; version="2.2.0"; sha256="04357qgd95c9xjr0xm8791rf650rzkls5brz0gg8z3j1yywfc3x1"; depends=[abind dials foreach ggplot2 kernlab magrittr Matrix nnet party polspline recipes rlang rsample Rsolnp survival tibble]; }; Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; }; MakefileR = derive2 { name="MakefileR"; version="1.0"; sha256="1pfjic2lsar8ghbb6byr4rqrs30qrgfih092z4rxdpsiwkk3y7l1"; depends=[magrittr]; }; Mangrove = derive2 { name="Mangrove"; version="1.21"; sha256="1qf3fjzf0sb6fqbfdbxwbw6wah3gg2qran4mgg13hcmk4n3j0hxp"; depends=[]; }; - ManifoldOptim = derive2 { name="ManifoldOptim"; version="0.1.4"; sha256="0c5hw01nlnxrys8d9qhwvnls834i0081pf9iic9kx5k6ckc7iwha"; depends=[Rcpp RcppArmadillo]; }; + ManifoldOptim = derive2 { name="ManifoldOptim"; version="0.1.5"; sha256="15549sgsrsq1b5l5bd3flcgzjyyw2ih211a7bdqv592jl672qq29"; depends=[Rcpp RcppArmadillo]; }; ManlyMix = derive2 { name="ManlyMix"; version="0.1.14"; sha256="0zpcc74965n435d4fah41r9nz0kjyn46hkjl1s0kvlllqj6n69wg"; depends=[]; }; ManyTests = derive2 { name="ManyTests"; version="1.2"; sha256="1mi7wvnkcd95126f1h8vl8skn397yd2zqvcswprqar54p161wgyi"; depends=[]; }; Map2NCBI = derive2 { name="Map2NCBI"; version="1.4"; sha256="1ssqnm9g5p0nnhdyp9dqbbsz3hw8jzdwy0rv3csp8fxm0f1bi1kb"; depends=[rentrez]; }; @@ -2489,19 +2506,20 @@ in with self; { MargCond = derive2 { name="MargCond"; version="1.0.0"; sha256="07qh1lgy8ds11cwlb4rxkl6aiph91zq29sy27b8wwxalycdgjrg8"; depends=[gee lme4 MASS Matrix]; }; MarginalMediation = derive2 { name="MarginalMediation"; version="0.7.0"; sha256="0jwp8rzv0ghir8k7dfmfrq4rvcqf7xww6va16p3jj2nk3r9hiq0x"; depends=[betareg boot cli crayon furniture magrittr purrr rstudioapi stringr tibble]; }; MarketMatching = derive2 { name="MarketMatching"; version="1.1.2"; sha256="0i3wccclrl7lixny24jif0xvmf6lgmwsgqxc6h5c3mv405cp0h1r"; depends=[bsts CausalImpact data_table doParallel dplyr dtw foreach ggplot2 iterators reshape2 scales zoo]; }; + Markovchart = derive2 { name="Markovchart"; version="1.0.6"; sha256="1r1rxsrdil7jxmhfzk8s4rqqs3v97kfvynbh5qa62g14acafm615"; depends=[doParallel foreach ggplot2 metR optimParallel]; }; MarkowitzR = derive2 { name="MarkowitzR"; version="1.0.2"; sha256="0p234zs7lvi83fv02mijrhp7hmr5cklddayb61krhx1h2hn4gzb9"; depends=[gtools matrixcalc]; }; MaskJointDensity = derive2 { name="MaskJointDensity"; version="1.0"; sha256="0nxhsz57cw96in0sg5xg7sicv920kcnxr2rikn39y2qk4vrw6r78"; depends=[ks MASS np plyr]; }; Massign = derive2 { name="Massign"; version="1.1.0"; sha256="09i32lsrx40rxrnb9alfipfrkipy4mza5nr4gcpn2a5h86ak9290"; depends=[]; }; MatManlyMix = derive2 { name="MatManlyMix"; version="1.1.1"; sha256="1d2vd5b9lirdybjclxh0nn4mghq64qjj4l8vnj95cni5pfa18a2c"; depends=[]; }; MatSkew = derive2 { name="MatSkew"; version="0.1.5"; sha256="019v2b1r0bvw84xs50smjb3jdz7gd2adz5d84xd8zq43lnml96d1"; depends=[]; }; - MatTransMix = derive2 { name="MatTransMix"; version="0.1.6"; sha256="07npn31abksi17s8g1cgxnciyw2nm1mzfmbys3kfkgb8nqq0d6g2"; depends=[]; }; + MatTransMix = derive2 { name="MatTransMix"; version="0.1.7"; sha256="1p67k2ysh7lahynlfyp30bxpzpc49jhdy2y5mfs09yhjwg0wl1by"; depends=[]; }; MatchIt = derive2 { name="MatchIt"; version="3.0.2"; sha256="1pp91pw2sy9hik4sgn4gcsp40hb01n9pfccrwdcffwji5fd1aavq"; depends=[MASS Matching]; }; MatchIt_mice = derive2 { name="MatchIt.mice"; version="3.0.1"; sha256="04c078fz7s0wll4wizi0mj4s3gdx1kpr5g40gq7znn362z7q25ym"; depends=[MatchIt mice]; }; - MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.0"; sha256="015s3xdaj56prq8lsdry3ibjkrb6gg0fwgzjh496gdx5axvpbk8g"; depends=[Hmisc Matching]; }; - MatchThem = derive2 { name="MatchThem"; version="0.9.1"; sha256="07sby3jyf3v7dmcm3pzjamsj5c6jfc65n1xdvakbd7nmlignb1m3"; depends=[broom dplyr MatchIt mice survey WeightIt]; }; - Matching = derive2 { name="Matching"; version="4.9-6"; sha256="1p36id8cds865b44jdbk6c3fnadvhh203qx6d3g54bi4s7bww3cf"; depends=[MASS]; }; + MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.3"; sha256="1si0zn6vlgyj08841hfjx8an96a8ipnawl4zbalabmpy7r5bfwx8"; depends=[Hmisc Matching]; }; + MatchThem = derive2 { name="MatchThem"; version="0.9.2"; sha256="08jrli2pyirrwk6hmqz10iiijargd5qmxs5r2r86gyiwkk5llw7m"; depends=[broom dplyr MatchIt mice survey WeightIt]; }; + Matching = derive2 { name="Matching"; version="4.9-7"; sha256="0vgw0nm40bicda2nwgklc27qsjxbqbjpl9yd28hqxj71xfsyqmhr"; depends=[MASS]; }; Matrix = derive2 { name="Matrix"; version="1.2-18"; sha256="06b1rc1vq65b271f2wpzhqkvhng8hwwnvjflzxkng50i52603zzp"; depends=[lattice]; }; - Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.7"; sha256="1x64r4aj3gy1dzjjysyrk1j9jq3qsnyrqws8i6bs7q8pf6gvr7va"; depends=[grr Matrix]; }; + Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.8"; sha256="0a5fq1scykqk0kc9j051j6fix6j2dqwz5wbgb0amaxsiywz9vigb"; depends=[grr Matrix]; }; MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.2"; sha256="0s4gxgl6fsy0fnjmsdz4k7p96vl6p00xl9w2fg7v0gikjpz6h5bg"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.3"; sha256="10r6h5bidj44kfbwiml9pkysbikqphfb21ig61qnx0qa12xcl6l8"; depends=[]; }; MatrixLDA = derive2 { name="MatrixLDA"; version="0.2"; sha256="0fixq35gp0fzmin75sfld2ln0zvnjgzrhk3b5yi7wdqzp99200yy"; depends=[glasso plyr Rcpp RcppArmadillo]; }; @@ -2513,7 +2531,6 @@ in with self; { MazamaCoreUtils = derive2 { name="MazamaCoreUtils"; version="0.4.2"; sha256="1p79wc3f1mcv9nlf8z277h1vzxl33w48knhn0yrw902vr5a0lzhf"; depends=[devtools dplyr futile_logger lubridate magrittr purrr rlang stringr tibble]; }; MazamaLocationUtils = derive2 { name="MazamaLocationUtils"; version="0.1.6"; sha256="187lrpc9z3k4jnd1nvqsb0qibz9xz9i1i61vssqm72h1hx1j9j6f"; depends=[digest dplyr geodist httr lubridate magrittr MazamaCoreUtils MazamaSpatialUtils readr revgeo rlang stringr]; }; MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.6.4"; sha256="0wb221h8lwdcx5h5hkvpz9rarizry22qzydibcc2gs6b0d5514ms"; depends=[countrycode dplyr geojsonio lubridate magrittr rgdal rgeos rlang rmapshaper rvest shiny sp stringr xml2]; }; - MazamaWebUtils = derive2 { name="MazamaWebUtils"; version="0.1.7"; sha256="16k6wxwjkdwzx1cqcxpxwaj7i63khly90gyiyfw13di43h8cvsd1"; depends=[dplyr futile_logger lubridate mime stringr webutils]; }; McSpatial = derive2 { name="McSpatial"; version="2.0"; sha256="18nmdzhszqcb5z9g8r9whxgsa0w3g7fk7852sgbahzyw750k95n4"; depends=[lattice locfit maptools quantreg RANN SparseM]; }; Mcomp = derive2 { name="Mcomp"; version="2.8"; sha256="1wz5fr3dhxn4s0qvxm2mzq9dbz3x0vgh6pixjrgk9d4i9w2p7s60"; depends=[forecast ggplot2]; }; MeTo = derive2 { name="MeTo"; version="0.1.0"; sha256="14hdyh3p3q8yb9w2li2y9pc356jnymsn6n2750zdsrh52b751lpm"; depends=[lubridate]; }; @@ -2523,8 +2540,8 @@ in with self; { MediaK = derive2 { name="MediaK"; version="1.0"; sha256="19cmxl2wksw9kvjsfn1m4nkr5gpcx6bk0sqrabj1n0dla1l32v2a"; depends=[Rcpp RcppEigen]; }; Mediana = derive2 { name="Mediana"; version="1.0.8"; sha256="0j1ikc2iaxl70134v0gijj2i2g0xgjafvn8rc108r9fhm8rpw564"; depends=[doParallel doRNG foreach MASS mvtnorm survival]; }; Mega2R = derive2 { name="Mega2R"; version="1.0.5"; sha256="18fhkghlx4rkafyx0jpxxyjq20xv6y6sfjyz7m68fi73akjz2rw7"; depends=[AnnotationDbi DBI famSKATRC gdsfmt GenomeInfoDb kinship2 pedgene Rcpp RSQLite SKAT]; }; - MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.4.1"; sha256="01irc5qnw7gsvnpifki05ksh7ys8znk0wvhqrzk1bv5294rnq6r1"; depends=[ggplot2 iterpc knitr Matrix plotly rjson rmarkdown robustbase]; }; - Mercator = derive2 { name="Mercator"; version="0.9.6"; sha256="09fk9cmnd636hnbhh3f1swmfk4j6nxfbz42hi2ylpriq7ygp7jq5"; depends=[ClassDiscovery cluster dendextend igraph KernSmooth Polychrome Rtsne Thresher]; }; + MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.4.2"; sha256="0s5d9b66gf4ihbrypbkzkqsws19shw2gbkjrk6cr7l11vw7lfd57"; depends=[ggplot2 iterpc knitr Matrix plotly rjson rmarkdown robustbase]; }; + Mercator = derive2 { name="Mercator"; version="0.10.0"; sha256="04hfcg85vs7gkbbgbsymv7xadzzm2rvypw5awnxrnfmdhwn9r9bk"; depends=[ClassDiscovery cluster dendextend igraph KernSmooth Polychrome Rtsne Thresher]; }; MergeGUI = derive2 { name="MergeGUI"; version="0.2-1"; sha256="1hx03qv5jyjjmqdvylc3kz5dl5qsdqwlirjbrnxrw7grkgkhygap"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 rpart]; }; MetABEL = derive2 { name="MetABEL"; version="0.2-0"; sha256="0rqjv85mgswrbbp8b8ip6cdmz0cvfy9lm5mcr8a7h38rzgx3g3i3"; depends=[]; }; MetFns = derive2 { name="MetFns"; version="3.2.2"; sha256="15fd2d0yysibi2x43qv6b8i1pa18l7z4n0zpmrqhsmvqkgy8sla0"; depends=[astroFns lubridate plotrix pracma]; }; @@ -2534,12 +2551,12 @@ in with self; { MetaAnalyser = derive2 { name="MetaAnalyser"; version="0.2.1"; sha256="0k58325nb7svihhpga7kdbryr9bi5470qsb8aa5llpiggs8j7sfz"; depends=[DT ggvis rstudioapi shiny]; }; MetaComp = derive2 { name="MetaComp"; version="1.1.2"; sha256="1yb115qdmf5rxmjl4y7qr0i6668n46scs4yjpfq9bmy3w9i4ji1x"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; }; MetaCycle = derive2 { name="MetaCycle"; version="1.2.0"; sha256="1lh1msrcz70p5jixz5j83pqa3cid21y7m1zvlk872k16awmif00k"; depends=[gnm]; }; - MetaIntegrator = derive2 { name="MetaIntegrator"; version="2.1.1"; sha256="11jblzqid9xyigj916filclk8ih15g04r58msb7lwlh9srn4hjw4"; depends=[AnnotationDbi Biobase BiocManager boot COCONUT data_table DBI dplyr DT GEOmetadb GEOquery ggplot2 ggpubr gplots HGNChelper httpuv magrittr manhattanly Metrics multtest pheatmap plotly plyr pracma preprocessCore readr reshape2 rmarkdown rmeta Rmisc RMySQL ROCR RSQLite stringr zoo]; }; + MetaIntegrator = derive2 { name="MetaIntegrator"; version="2.1.3"; sha256="1763in7zcfr4abhwc0sy27c1qbzbhkyjsasrhwdjjmsc645sqxlx"; depends=[AnnotationDbi Biobase BiocManager boot COCONUT data_table DBI dplyr DT GEOmetadb GEOquery ggplot2 ggpubr gplots HGNChelper httpuv magrittr manhattanly Metrics multtest pheatmap plotly plyr pracma preprocessCore readr reshape2 rmarkdown rmeta Rmisc RMySQL ROCR RSQLite stringr zoo]; }; MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.6"; sha256="1m7i1y9jmhwa3h3xbqqlskgr216x50jb4wx8n3ynh16hw54n07xi"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; }; MetaLonDA = derive2 { name="MetaLonDA"; version="1.1.8"; sha256="0nalkmsii2anw07r16zcpgafb01l87hgpfr1mwc7nggvhdfp3w2g"; depends=[DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr pracma zoo]; }; MetaPCA = derive2 { name="MetaPCA"; version="0.1.4"; sha256="14g4v3hyxnds4l2q36mpz282yqg8ahgdw3b0qmj0xg17krrf5l2s"; depends=[foreach]; }; MetaPath = derive2 { name="MetaPath"; version="1.0"; sha256="1vvpfv6yc4rd4apqfs2yzm97xxsv43ghwqnjq6w1xrc4pdx2p634"; depends=[Biobase genefilter GSEABase impute]; }; - MetaSKAT = derive2 { name="MetaSKAT"; version="0.71"; sha256="1bfy1zqblwz7a9fr9i6hs18x2n422x52b928v77r3924nasa67a8"; depends=[SKAT]; }; + MetaSKAT = derive2 { name="MetaSKAT"; version="0.80"; sha256="1hkkirbxl17v7sdbj4646fijlwvdw3p10h97r9h46cw6cn77v5gq"; depends=[SKAT]; }; MetaStan = derive2 { name="MetaStan"; version="0.1.1"; sha256="0sln7hr892npq508qbswhnpx27vjd5qnh81glazma5m3k2li53jb"; depends=[BH Rcpp RcppEigen rstan rstantools StanHeaders]; }; MetaSubtract = derive2 { name="MetaSubtract"; version="1.50"; sha256="1aggkvpyl2zpnmqzrr7k22wmb4dyagljcwrkm956nbyvlzx4sx2x"; depends=[]; }; MetaUtility = derive2 { name="MetaUtility"; version="2.1.0"; sha256="1lbqqh56pwxlcksv0kf463hc20jb4rkjqkcqal000rzyzd4bi2zj"; depends=[dplyr metafor purrr stringr]; }; @@ -2561,16 +2578,14 @@ in with self; { MfUSampler = derive2 { name="MfUSampler"; version="1.0.4"; sha256="0i5siq1jacxbfvakb97qnj3h7pk471rrx8ckwm0d8nl3j586s36y"; depends=[ars coda HI]; }; MiDA = derive2 { name="MiDA"; version="0.1.2"; sha256="144gxsxqljzskxsw5k0y69ix0pxlfvyyznxkjpf2ng4l47pg11z5"; depends=[caret gbm genefilter limma preprocessCore pROC SQN]; }; MiRAnorm = derive2 { name="MiRAnorm"; version="1.0.0"; sha256="154wv0j82xyc4y5cd2czh0q8kzhgrk6qsn0ahc1zn3fnrzc9fgz0"; depends=[ArgumentCheck cluster dendextend ggplot2 MASS npmv plyr reshape2]; }; - MiRKAT = derive2 { name="MiRKAT"; version="1.0.1"; sha256="1adhy9ysjm8xa45sb4x17ryznvg91c9xdf0irpcgc7rbg34rxf5x"; depends=[GUniFrac MASS PearsonDS survival]; }; MiRSEA = derive2 { name="MiRSEA"; version="1.1"; sha256="0jpl6ws5yx1qjzdnip9a37nmvx81az4cbsjm57x613qjpwmg6by3"; depends=[]; }; MiSPU = derive2 { name="MiSPU"; version="1.0"; sha256="1l6q0fm5z5i6gigr940h8kc5rka08psmhcprp8grmsxk3qy2kply"; depends=[ape aSPU cluster Rcpp RcppArmadillo vegan]; }; MiST = derive2 { name="MiST"; version="1.0"; sha256="0gqln792gixqfh201xciaygmxbafa0wyv5gpbg9w5zkbbv44wrfk"; depends=[CompQuadForm]; }; MicSim = derive2 { name="MicSim"; version="1.0.15"; sha256="0nbrl013i1jz5hsq5a6526rlsp0qvvrbs86md6yrvhh90bsnf65p"; depends=[chron rlecuyer snowfall]; }; MicroDatosEs = derive2 { name="MicroDatosEs"; version="0.8.2"; sha256="0k0hmi3ciipizmgjw1i5rrsg34yx21s1msn40vc4qc9s1n4wd8dl"; depends=[readr]; }; MicroMacroMultilevel = derive2 { name="MicroMacroMultilevel"; version="0.4.0"; sha256="1q5cyqr4hdl1wp2isk6p4p084i83kg6hd406wdp1nj9lv5i0xvgw"; depends=[]; }; + MicroNiche = derive2 { name="MicroNiche"; version="1.0.0"; sha256="166ci4crkwnnh05rhs5hyrljgm4cdf7gp0ff8kjxjmd60byw80mz"; depends=[ggplot2 reshape2]; }; MicroStrategyR = derive2 { name="MicroStrategyR"; version="1.0-1"; sha256="0a6bk0wnwx8zy9081n7wb12lidgckrhn350r0q5m6aa82l6l8ihi"; depends=[gWidgetsRGtk2]; }; - MigClim = derive2 { name="MigClim"; version="1.6.1"; sha256="116zsmir0hz6ah3qwsr8bb8qhhfzvg1rciwm8a6lq02mvw0v0vrn"; depends=[raster]; }; - MinBAR = derive2 { name="MinBAR"; version="1.1.0"; sha256="03hzv6a56w0d6di3jp3w3fgckwxkqb1cy3xiwcvzyg5lzm4z9p2x"; depends=[dismo ecospat geosphere lattice latticeExtra maxnet raster rgdal sp]; }; MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; }; Miney = derive2 { name="Miney"; version="0.1"; sha256="0sgln0653rgglinr8rns5s2az0lgyp9slmynyhhhs265grkhrfj0"; depends=[]; }; Minirand = derive2 { name="Minirand"; version="0.1.3"; sha256="19lib0qh3xfzvpgsskl3yypmjygss0w7pimz0136av0px5b4jran"; depends=[]; }; @@ -2600,11 +2615,10 @@ in with self; { Modalclust = derive2 { name="Modalclust"; version="0.7"; sha256="0ymzdxp6rh6baih1xm6kj8l8jxjclvnmq0gfp38cl8lpskspb26x"; depends=[class mvtnorm zoo]; }; ModelGood = derive2 { name="ModelGood"; version="1.0.9"; sha256="1y99a7bgwx167pncxj00lbw3cdjj23fhhzl8r24hwnhxr984kvzl"; depends=[prodlim]; }; ModelMap = derive2 { name="ModelMap"; version="3.4.0.1"; sha256="1279k5hznxrb6fq4zd1baw1pm5dj5437g5awkgb8kp7ll8raa2ql"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; - ModelMetrics = derive2 { name="ModelMetrics"; version="1.2.2.1"; sha256="17yw46yr0n9hddvlhh73jdpmpdlpa581n5xjpwkr6cpr2f7xxpqc"; depends=[data_table Rcpp]; }; + ModelMetrics = derive2 { name="ModelMetrics"; version="1.2.2.2"; sha256="0mrlsw4c5y1vdsqynxr2dcvmhh5h37pnd71jw5a5djpbda9g21jy"; depends=[data_table Rcpp]; }; Modelcharts = derive2 { name="Modelcharts"; version="0.1.0"; sha256="1jy78kyyh4r13px2d5bm7fra5bkcpimzfji0hmydspkfi3qla37x"; depends=[dplyr plotly]; }; Modeler = derive2 { name="Modeler"; version="3.4.5"; sha256="15gbg5568qj81wp6yy31amb2b7wl1wvlmgpmdp29lvz1p33jx2y1"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; }; - MomTrunc = derive2 { name="MomTrunc"; version="5.69"; sha256="14wvrkyasz9x54rk8cmdx523hsyvzhg2g6bx63gzah6wg5inmj25"; depends=[hypergeo mvtnorm Rcpp RcppArmadillo tlrmvnmvt]; }; - Momocs = derive2 { name="Momocs"; version="1.2.9"; sha256="13pgn31hv529z33mi020w8wm8ya7hyi5yfsp45a78wdhinqas9mm"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS progress RColorBrewer rgeos sp]; }; + MomTrunc = derive2 { name="MomTrunc"; version="5.79"; sha256="01pbajb2vziw3hl4600mcwdljkh3lmacqz14mknj0fkd2qnqdrnm"; depends=[hypergeo mvtnorm Rcpp RcppArmadillo tlrmvnmvt]; }; Mondrian = derive2 { name="Mondrian"; version="1.0-0"; sha256="07r64q518diphai951pw4vfaw4sd6bqwhi6q5cp4pcl3aqjynkmj"; depends=[RColorBrewer]; }; MonetDB_R = derive2 { name="MonetDB.R"; version="1.0.1"; sha256="1r7vki0rrzwcrfg4f2lfx30g614vf2xi62qb1rs21a9j5741lxlx"; depends=[codetools DBI digest]; }; MonoInc = derive2 { name="MonoInc"; version="1.1"; sha256="14rykw3bfj0vznz0rw4vsg1k4vanfv9cy867vspw966ncl4bw70h"; depends=[compare doParallel foreach iterators sitar]; }; @@ -2612,17 +2626,16 @@ in with self; { MonoPoly = derive2 { name="MonoPoly"; version="0.3-10"; sha256="0ls3sjfkinp9c5002ww0xm4l2galf20w2f45nm5irkk9sbqas0jq"; depends=[quadprog]; }; Monte_Carlo_se = derive2 { name="Monte.Carlo.se"; version="0.1.0"; sha256="1d5gp4wvpvrlp82g8k8v668mzhmdlk2pvky34v7hxysap9xgmsqr"; depends=[]; }; MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.6"; sha256="1jwq3by8zfy6sbzahcj5l0vicqn7yyqpb7xhfsaymfspm7xyq6pj"; depends=[abind codetools reshape rlecuyer snow snowfall]; }; - MoonFinder = derive2 { name="MoonFinder"; version="1.0.3"; sha256="1lwjrzk68x1xxa10mk2zwaj6kwlryyad7wcd5vf85di5bbbvpm7n"; depends=[annotate clusterProfiler igraph org_Hs_eg_db pheatmap RColorBrewer]; }; - Morpho = derive2 { name="Morpho"; version="2.7"; sha256="0zgq79yfgkl6g404j9hpdaza5m5qkklh1xpf9xpmyf940pqdw21c"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; + Morpho = derive2 { name="Morpho"; version="2.8"; sha256="080ix1j0r67l0y66zq4xzfl8lhd3q4y4hzmmxphxkhmx83rhsik0"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; }; MortCast = derive2 { name="MortCast"; version="2.1-2"; sha256="0p5cjzrl3yhrbhjr31fm84rj7dl7n65qzccj447ky1lvb4c0v2x1"; depends=[wpp2017]; }; MortalityGaps = derive2 { name="MortalityGaps"; version="1.0.0"; sha256="0nfm8xa7gnshrl8hsvmvr3za8nbppp7f7i5h4ni204w7xwvh8jxc"; depends=[crch forecast MASS pbapply]; }; - MortalityLaws = derive2 { name="MortalityLaws"; version="1.8.3"; sha256="1k3wamxgrsl08sfymfqhlgal38nxxgqfibqkh1qkmm4006pp7xx3"; depends=[minpack_lm pbapply RCurl tidyr]; }; + MortalityLaws = derive2 { name="MortalityLaws"; version="1.8.4"; sha256="0sgxkw9f8s3iv6x2clsx6505wjflg6xa3w19m4q6gz8fkbh2sxfv"; depends=[minpack_lm pbapply RCurl tidyr]; }; MortalitySmooth = derive2 { name="MortalitySmooth"; version="2.3.4"; sha256="1clx8gb8jqvxcmfgv0b8jyvh39yrmcmwr472j9g3ymm95m4hr8fq"; depends=[lattice svcm]; }; MortalityTables = derive2 { name="MortalityTables"; version="1.0"; sha256="07pbjgc4qvznw1rfvmz6ndg0gzj0k61iajwn51ijpb7hscwi8937"; depends=[ggplot2 scales]; }; MplusAutomation = derive2 { name="MplusAutomation"; version="0.7-3"; sha256="0sidvznbknc4pdk4w6izpizap2yvbzxbjnmnrxmwj45ypm9pjpqc"; depends=[boot coda data_table digest ggplot2 gsubfn lattice pander plyr rlang texreg xtable]; }; MplusTrees = derive2 { name="MplusTrees"; version="0.1.1"; sha256="1s119p1fgr27rkh671zpzbfnd368m0s1607r8xwgjm0y5ncxwkv7"; depends=[MplusAutomation nlme rpart rpart_plot]; }; - Mqrcm = derive2 { name="Mqrcm"; version="1.0"; sha256="1z8zyjvjz1izaal5y6dnlm86pvydab45d9qnhcnibi2l9r1ladkc"; depends=[Hmisc pch]; }; + Mqrcm = derive2 { name="Mqrcm"; version="1.1"; sha256="15pxrh5i8pm6ckp44mlgq1ld5b1y9kg6vjvis5k812h64gm3aizq"; depends=[Hmisc pch]; }; MsdeParEst = derive2 { name="MsdeParEst"; version="1.7"; sha256="1zhi1jr30sl7jpsw37lc3akfzixlhm9k2hjkha1pjy5fmd5lddlx"; depends=[MASS moments mvtnorm sde]; }; MtreeRing = derive2 { name="MtreeRing"; version="1.4.2"; sha256="097w65ijhdkag26z39kzqqp7bs3bcx4iqapj3qc8inh0iynhnxp6"; depends=[bmp dplR dplyr imager jpeg magick magrittr measuRing png shiny shinydashboard shinyWidgets spatstat tiff]; }; MuChPoint = derive2 { name="MuChPoint"; version="0.6.1"; sha256="15bqsc7bsjg55qxjwxh58bxbwz61a6wv4xxph994g4020b98l01x"; depends=[capushe Matrix Rcpp shiny]; }; @@ -2632,7 +2645,7 @@ in with self; { MullerPlot = derive2 { name="MullerPlot"; version="0.1.2"; sha256="0am5brdmbh2mw74fbw9nha6h4qlhj8psg3142mql1ad99bd0zg4w"; depends=[RColorBrewer]; }; MultAlloc = derive2 { name="MultAlloc"; version="1.2"; sha256="0c3sqfaa08s8mk4yz77kh6q6v9ic5xp52g9prfw1k2kv4nw1k2qd"; depends=[Rglpk]; }; MultEq = derive2 { name="MultEq"; version="2.3"; sha256="0fshv7i97q8j7vzkxrv6f20kpqr1kp9v6pbw50g86h37l0jghj7r"; depends=[]; }; - MultNonParam = derive2 { name="MultNonParam"; version="1.3.0"; sha256="13xkwyvqqjvs5nv383y3hy1w0mz2qmqwih5rh9dqs7r7afx7928n"; depends=[]; }; + MultNonParam = derive2 { name="MultNonParam"; version="1.3.3"; sha256="10fkvi4iz9wc7vza2cpqpl85wywbiipbkvbqdxzz7wxr5a3agk2r"; depends=[ICSNP]; }; MultiBD = derive2 { name="MultiBD"; version="0.2.0"; sha256="1qjfr8hx8sr5m8370yzi09r8jnh3i6907wzj3v4h83vmjh81db71"; depends=[BH Rcpp RcppParallel]; }; MultiCNVDetect = derive2 { name="MultiCNVDetect"; version="0.1-1"; sha256="0mfisblw3skm4y8phfg4wa0rdchl01wccarsq79hv63y78pfhh13"; depends=[]; }; MultiFit = derive2 { name="MultiFit"; version="1.0.1"; sha256="1hy2xsmdcsn4jwa06ffymhhd4prxjnqw0jxl77sxq8yb1fc2vk64"; depends=[data_table Rcpp RcppArmadillo]; }; @@ -2641,6 +2654,7 @@ in with self; { MultiLCIRT = derive2 { name="MultiLCIRT"; version="2.11"; sha256="1qls0qp5fz377h50lvpzq3vkw49i3nvizli98gss50nqci8ssqm4"; depends=[limSolve MASS]; }; MultiMeta = derive2 { name="MultiMeta"; version="0.1"; sha256="0gj0wk39fqd21xjcah20jk16jlfrcjarspbjk5xv74c9k4p5gmak"; depends=[expm ggplot2 gtable mvtnorm reshape2]; }; MultiOrd = derive2 { name="MultiOrd"; version="2.4.1"; sha256="09hwd9x0kn1f5p1jiypalvh5akjivhj8v2wh3iaavdf8c2vg04kg"; depends=[corpcor Matrix mvtnorm psych]; }; + MultiPhen = derive2 { name="MultiPhen"; version="2.0.3"; sha256="0razswg4wqsz4q0dvpxp3swmxk82ig8gkyi4vcmxh11nlhb258w3"; depends=[abind epitools HardyWeinberg MASS meta RColorBrewer]; }; MultiRNG = derive2 { name="MultiRNG"; version="1.2.2"; sha256="0ah7m9ykji0v35bnj012621y47qn9l6vk2q17dj4zx5qfi8wdy2l"; depends=[]; }; MultiRR = derive2 { name="MultiRR"; version="1.1"; sha256="1jrhx3nlqwsv3i6r8fs142llw88qad41rsh0sj1pv1gb928zpvl3"; depends=[lme4 MASS]; }; MultiRobust = derive2 { name="MultiRobust"; version="1.0.5"; sha256="15l23a2mkpcxc3y93f761c5fwcj5h13yma4qdfdlr8fiqkvc3acg"; depends=[]; }; @@ -2690,8 +2704,8 @@ in with self; { NHEMOtree = derive2 { name="NHEMOtree"; version="1.0"; sha256="0ycprj2rz2fy6a7ps0bsr27iphmbfxi9pbvl8rcr6p8yagfb84mb"; depends=[emoa partykit rpart sets]; }; NHLData = derive2 { name="NHLData"; version="1.0.0"; sha256="0dfqalccbkmqrn3h1z6s78l818c8sqn7d6yc8mg872ygmszryci7"; depends=[]; }; NHMM = derive2 { name="NHMM"; version="3.10"; sha256="058p0lyizqhdhapvjxk2c7n0bpid340hv1dn0cypy5w12y7zml4s"; depends=[BayesLogit MASS MCMCpack msm Rcpp]; }; - NHMSAR = derive2 { name="NHMSAR"; version="1.15"; sha256="0fbv5jjrzir9i84pidigjhfnjyyzhnhi7j1mn7cx58wlh9qn9ark"; depends=[glasso lars ncvreg ucminf]; }; - NHPoisson = derive2 { name="NHPoisson"; version="3.2"; sha256="0k6m6ampp7g95d0jm5msvrgc12rqirpanb1ykbdf1ii027pqpwsn"; depends=[car]; }; + NHMSAR = derive2 { name="NHMSAR"; version="1.16"; sha256="0qwc7hnzr69xfwxgg151j7d8ffas66w48d4p76njrkq7l7rb9681"; depends=[glasso lars ncvreg ucminf]; }; + NHPoisson = derive2 { name="NHPoisson"; version="3.3"; sha256="1i6n59ckcxk1hwyz97jmnv4yb96ianjma6ka8lpz79ivs41jniad"; depends=[car]; }; NHSRdatasets = derive2 { name="NHSRdatasets"; version="0.1.2"; sha256="0xiqbqq7xjyi1vxza853ylyiq4nqr6y10x8i13c2kj756biz4h1n"; depends=[]; }; NIPTeR = derive2 { name="NIPTeR"; version="1.0.2"; sha256="0ll6amqyw33a93xiccihidrnbaqlx1q7kqcd4wks7cvqawd8pgv1"; depends=[Rsamtools S4Vectors sets]; }; NIRStat = derive2 { name="NIRStat"; version="1.0"; sha256="1hi8201zslp1f7m3jci8q03y3f1zlcck2x3i793l7lsyl7qbzd1z"; depends=[ggplot2 gridExtra mgcv]; }; @@ -2703,19 +2717,18 @@ in with self; { NLPclient = derive2 { name="NLPclient"; version="1.0"; sha256="0jhlz9mqziyk5574vl8qjjs4g75x27rlk90wvzm3q9kjrjyvad35"; depends=[curl NLP xml2]; }; NLPutils = derive2 { name="NLPutils"; version="0.0-5"; sha256="1jxxly85iajzb9qckkkar0przyxv005cyvry0qi5dkzhbyl5k490"; depends=[NLP qdap SnowballC]; }; NLRoot = derive2 { name="NLRoot"; version="1.0"; sha256="1x8mcdgqqrhyykr12bv4hl4wbh1zw2qgpnd2yrm68kb92iy95rh4"; depends=[]; }; + NMADiagT = derive2 { name="NMADiagT"; version="0.1.2"; sha256="0fskc3ldfdl17gazpfr2hixy79n7db4c1f5yl1jalhwxiabnxjwp"; depends=[coda ggplot2 imguR ks MASS MCMCpack plotrix Rdpack reshape2 rjags]; }; NMAoutlier = derive2 { name="NMAoutlier"; version="0.1.13"; sha256="0d3mg92ky5mhjz6y1903ssanl1lzq4q22yifgjyq29j9snx0jkx1"; depends=[ggplot2 gridExtra MASS netmeta reshape2]; }; - NMF = derive2 { name="NMF"; version="0.21.0"; sha256="1qq25n3k5sgh3srlshb3ic6q92s12c1ilqf5cd5anvq6cqfchc1v"; depends=[cluster colorspace digest doParallel foreach ggplot2 gridBase pkgmaker RColorBrewer registry reshape2 rngtools stringr]; }; + NMF = derive2 { name="NMF"; version="0.22.0"; sha256="0b2ls3x1nkrnam45hagpys624nzxj3v7kxnp0q216yakvx5h57cq"; depends=[Biobase BiocManager cluster colorspace digest doParallel foreach ggplot2 gridBase pkgmaker RColorBrewer registry reshape2 rngtools stringr]; }; NMFN = derive2 { name="NMFN"; version="2.0"; sha256="0n5fxqwyvy4c1lr0glilcz1nmwqdc9krkqgqh3nlyv23djby9np5"; depends=[]; }; NMI = derive2 { name="NMI"; version="2.0"; sha256="1rxphy9rhy9zhdiz48dvl9m26x6k681lnyn39lqxs0a6jhrxg7y3"; depends=[]; }; NMOF = derive2 { name="NMOF"; version="2.0-1"; sha256="1p3qkgw255wn1xzrjp9bgvblmkpi3ngrv57m88r54s5m90h72z26"; depends=[]; }; NMVANOVA = derive2 { name="NMVANOVA"; version="1.1.0"; sha256="1jlqyg5vn7j8srvifjghd5a7820kadl8kbwib4qxalrfprq81h8p"; depends=[]; }; - NNLM = derive2 { name="NNLM"; version="0.4.3"; sha256="0p7p26070w2j57z5i89pmpgd470yh2z0rrfzpalzdngc8mzp2rkj"; depends=[Rcpp RcppArmadillo RcppProgress]; }; NNMIS = derive2 { name="NNMIS"; version="1.0.1"; sha256="1w2i4xlx249p589yqdgbx1ra406ycxw729vbk1lqadbn71m6blaz"; depends=[survival]; }; - NNS = derive2 { name="NNS"; version="0.4.8"; sha256="09wdq55i8csnmj72dwm0ksmwnzh81w8ry7s55iq18sh7n3j4npn8"; depends=[data_table doParallel dtw rgl stringr]; }; + NNS = derive2 { name="NNS"; version="0.5.0"; sha256="0faqxl7bsf819qljr5v7zgrvpadkxbkawmfjwd9cy23qms8dwphg"; depends=[data_table doParallel dtw rgl stringr]; }; NNTbiomarker = derive2 { name="NNTbiomarker"; version="0.29.11"; sha256="0sqlf7vzhpmq2g98c2qlrcqn3ba4ycfxbczgcjiqqhqsvgkpacc1"; depends=[magrittr mvbutils shiny stringr xtable]; }; NORMA = derive2 { name="NORMA"; version="0.1"; sha256="193q6dwn8v7k8xq0amjpvb3v6mn7c6agqa487gvjj78dy1qz720a"; depends=[rootSolve]; }; NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; }; - NORTARA = derive2 { name="NORTARA"; version="1.0.0"; sha256="1q4dmn5q939d920spmxxw08afacs3pzhr2gzwyqa5kn8xiz4ffg8"; depends=[corpcor Matrix]; }; NPBayesImputeCat = derive2 { name="NPBayesImputeCat"; version="0.2"; sha256="0fxcs2l6g1gkvydl04ippkq192jn0zl2c304ww4hczzpvn7l8lsp"; depends=[Rcpp]; }; NPC = derive2 { name="NPC"; version="1.1.0"; sha256="06y6vdln5zyinq9bsp66yz6i1v5bkw9pa2hknl9brwc75z359apn"; depends=[coin dplyr matlab permute]; }; NPCD = derive2 { name="NPCD"; version="1.0-11"; sha256="107i33z4q5w2828sm0pm8234kmp1v3a2w72lmhvi0rpnjhg0x120"; depends=[BB R_methodsS3]; }; @@ -2728,7 +2741,7 @@ in with self; { NPMVCP = derive2 { name="NPMVCP"; version="1.1"; sha256="13jpm46abwziq8859jhl6hg1znk3ws1q7g4vlr2jyri3qa6h22dd"; depends=[]; }; NPP = derive2 { name="NPP"; version="0.2.0"; sha256="0zm67b9gs32snsd1knmdmz0ksksdin9cvqrqd94n7g378gdql96y"; depends=[]; }; NPS = derive2 { name="NPS"; version="1.1"; sha256="02idja149a2sj97sks4lhsaflpifyxi6n0rjlcq9993f84szfgsi"; depends=[]; }; - NPflow = derive2 { name="NPflow"; version="0.13.1"; sha256="0sq47frh665m8mibif1w3i2z5pb577v1ngdjirbya0a9chpmwc3s"; depends=[ellipse fastcluster ggplot2 gplots pheatmap Rcpp RcppArmadillo reshape2 truncnorm]; }; + NPflow = derive2 { name="NPflow"; version="0.13.3"; sha256="1bgdkm82pmzjv46pkxpvh5ffffmc6q68x5jjl7k330w9vwgx2kf0"; depends=[ellipse fastcluster ggplot2 pheatmap Rcpp RcppArmadillo reshape2 truncnorm]; }; NPsimex = derive2 { name="NPsimex"; version="0.2-1"; sha256="1k9i1f5ckvzdns8f5qnm2zq7qs3wsgzsnfwdz21zmhmi6d0pwchm"; depends=[]; }; NSM3 = derive2 { name="NSM3"; version="1.12"; sha256="0spkzx2zm8q85h7ij9r52bsqlwgw2fsc7zw3aaz8644q0xlnjnvj"; depends=[agricolae ash binom BSDA coin combinat epitools fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; NSO1212 = derive2 { name="NSO1212"; version="1.0.0"; sha256="1yk07n9ksbazj27sax5jhs5f84zy80awrvkhziclsqm3h1g3h7w5"; depends=[httr jsonlite]; }; @@ -2739,7 +2752,7 @@ in with self; { NUCOMBog = derive2 { name="NUCOMBog"; version="1.0.4.2"; sha256="0s6gm3adc9qdh94pxzgccbxx1f1lbgqyvd4xk37xp6f3b5hwljdz"; depends=[snowfall]; }; NameNeedle = derive2 { name="NameNeedle"; version="1.2.4"; sha256="1f8hmabwafjmgx2z381a3m84zfrd0s9x51haa4c1phq41yfq2lm5"; depends=[]; }; NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.1"; sha256="05r1hvrxwi2mcq3pv6b699291qg120ijad96s5dah2f6cwx7gm7j"; depends=[gdata vsn XML]; }; - NatureSounds = derive2 { name="NatureSounds"; version="1.0.1"; sha256="1wd9kngkrxlldkzpvb5gxsbjd8z3m0rbjvbw6ca95zhv37kjz4lh"; depends=[]; }; + NatureSounds = derive2 { name="NatureSounds"; version="1.0.3"; sha256="0db7y6213bkmfjr2r3jkdbx0wja778cgnavap03v7fswrl61w61m"; depends=[knitr tuneR]; }; NbClust = derive2 { name="NbClust"; version="3.0"; sha256="1vwb48zy6ln1ddpqmfngii1i80n8qmqyxnzdp6gbaq96lakl3w3c"; depends=[]; }; NeatMap = derive2 { name="NeatMap"; version="0.3.6.2"; sha256="186y06zrh87q6vixl2da2d6apvcj1zkk79c95k081zj5awmryr9b"; depends=[ggplot2 rgl]; }; NegBinBetaBinreg = derive2 { name="NegBinBetaBinreg"; version="1.0"; sha256="0ryi9gdf4sis77c0qxm6r86mfkk1nq9djs297y64nr6ng3rv9p9d"; depends=[boot Matrix mvtnorm]; }; @@ -2749,7 +2762,7 @@ in with self; { NetComp = derive2 { name="NetComp"; version="1.6"; sha256="11rxpdihn575diqfvc7yvxhlr2c19fig4v4a5c6jhqyfdsd60fsv"; depends=[gdata]; }; NetData = derive2 { name="NetData"; version="0.3"; sha256="1jf05zwy0c6gmm7kvxlwvai61bz4wpsw7cl0h4i21ipzn1rqxmqj"; depends=[]; }; NetIndices = derive2 { name="NetIndices"; version="1.4.4"; sha256="0ydivbri8l8zkxi18ghj9h66915scyhca8i9mcyq4b06mjfigss8"; depends=[MASS]; }; - NetLogoR = derive2 { name="NetLogoR"; version="0.3.6"; sha256="02i9jd6sksxkbnm3ldadp1xfmhkb27n5ahhgs70fg2g5nhc2jxs9"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; + NetLogoR = derive2 { name="NetLogoR"; version="0.3.7"; sha256="0w32sp5lc37bd9fb2wn3lnym82jz3wi24fpdrs33cvkbvry12c04"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; NetMix = derive2 { name="NetMix"; version="0.1.5"; sha256="1s6h5d34fd6brpiank2mpvpscvsgw86zfyq677s8nh8bkrc4idzs"; depends=[clue gtools igraph lda MASS Matrix poisbinom Rcpp RcppArmadillo RSpectra]; }; NetOrigin = derive2 { name="NetOrigin"; version="1.0-3"; sha256="162dhyx7z1nd3z14lfvm3dz0qwwvrc3n17zswbnwcfj6g1b1p2f1"; depends=[colorspace Hmisc igraph]; }; NetPreProc = derive2 { name="NetPreProc"; version="1.1"; sha256="0r51dqymf2nqm86py4zwdlf7qf120j0bg9r6a9c0gsyyijh4z40p"; depends=[graph]; }; @@ -2757,16 +2770,16 @@ in with self; { NetSimR = derive2 { name="NetSimR"; version="0.1.0"; sha256="0iadlvc7m78svkjcwx18pk18jg7dv69gm1cvkz8k2a7b1absd9f5"; depends=[]; }; NetSwan = derive2 { name="NetSwan"; version="0.1"; sha256="1mwdy3ahagiifj2bd1ajrafvnxzi74a1x1d3i2laf1hqpz3fbgld"; depends=[igraph]; }; NetWeaver = derive2 { name="NetWeaver"; version="0.0.6"; sha256="058fi3vbp11mbg69n4yp1zf48akfdl6s2p0qpa0v6ngmk2zjk0bq"; depends=[]; }; - NetworkChange = derive2 { name="NetworkChange"; version="0.5"; sha256="1n4nnnds8m0waa64b1k14ph1jdj26pd6fphsd53ad5lpyglpzq0y"; depends=[abind GGally ggplot2 ggrepel ggvis gridExtra igraph LaplacesDemon MASS MCMCpack mvtnorm network qgraph RColorBrewer reshape rlang Rmpfr sna tidyr]; }; + NetworkChange = derive2 { name="NetworkChange"; version="0.6"; sha256="0p08fwxf99dybx6rgchjqhl9xym4x0hhmwwvmg3gvj5jm7rb4kj0"; depends=[abind GGally ggplot2 ggrepel ggvis gridExtra igraph MASS MCMCpack mvtnorm network qgraph RColorBrewer reshape rlang Rmpfr sna tidyr]; }; NetworkComparisonTest = derive2 { name="NetworkComparisonTest"; version="2.2.1"; sha256="0a4v69p1xykzb4s9sqj2bqm333a6sx2j8f8jdnp3l7dlkwg9clqp"; depends=[IsingFit IsingSampler Matrix qgraph reshape2]; }; NetworkDistance = derive2 { name="NetworkDistance"; version="0.3.2"; sha256="1sd5pnm95l0w3737gyrjxhxvnx4wgz72mw5d5q8vp3vygxagx86h"; depends=[doParallel foreach igraph Matrix network pracma Rcpp RcppArmadillo Rdpack RSpectra]; }; NetworkExtinction = derive2 { name="NetworkExtinction"; version="0.1.1"; sha256="1958kpdcqp4hhkqmfjg2qnrzhwcmfkbgdriq9iyqmmcr7qm8c1y7"; depends=[broom dplyr ggplot2 magrittr network scales sna tidyr]; }; NetworkInference = derive2 { name="NetworkInference"; version="1.2.4"; sha256="1x63szbns8wf3k89ibk2p66prngw4fr2ckfn1568mnxdwnzvhrb4"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp RcppProgress]; }; - NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.2"; sha256="0c10nahybjd1n0yr78ynbsdnkfa0p7kz6dx3rbwxwsp3x4mrcd6y"; depends=[dplyr expm ggplot2 Matrix]; }; + NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.4"; sha256="1121ma43jxc4p9rw0sc8w32shf9xrmn5qd1xsqgzr8diymc49zhg"; depends=[dplyr expm ggplot2 Matrix]; }; NetworkSim = derive2 { name="NetworkSim"; version="0.1.0"; sha256="1gvhzlmq46p99wald4pjnv9wxxqdympjkh3bzi98qa7qi84lny7y"; depends=[igraph incgraph]; }; - NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.3.3"; sha256="1i9kdwd989l53fcx59yg9ac9bi5calj978pgif0rnz8vv4vvsgm2"; depends=[corrplot doParallel fdrtool foreach igraph IsingFit MASS Matrix pbapply ppcor psych pwr qgraph R_matlab]; }; + NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.4.0"; sha256="1z7qkcj2djxf9bgdhjk7bgfxhb54m013qcsi421lbdjlppsysm7a"; depends=[corrplot doParallel fdrtool foreach igraph IsingFit MASS Matrix pbapply ppcor psych pwr qgraph R_matlab]; }; NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.2"; sha256="0d73rbp8v0k0j8dp4yigan7krhglx6qfbadvyg7nsj67xc00vbfd"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; - NeuralSens = derive2 { name="NeuralSens"; version="0.1.3"; sha256="0xgn5x8vjfv0k3skyjm5j9wi0qfnmhdpfmg5q7564zylyjb0kvsh"; depends=[caret fastDummies ggforce ggplot2 gridExtra Hmisc NeuralNetTools reshape2 stringr]; }; + NeuralSens = derive2 { name="NeuralSens"; version="0.2.0"; sha256="08hq653mah2yp3fcx6wvv9cy4kb649ydibq12znxn8yhlws9kk3v"; depends=[caret fastDummies ggforce ggplot2 gridExtra Hmisc NeuralNetTools reshape2 scales stringr]; }; Newdistns = derive2 { name="Newdistns"; version="2.1"; sha256="1b5njkzj8b0wrvvfv904di0933k9d320gadmfm5zl6pzdp34bh1i"; depends=[AdequacyModel]; }; NewmanOmics = derive2 { name="NewmanOmics"; version="1.0.4"; sha256="1ny1w4kwdgfzm4jsj6mf3k0c10bwzwz4gmpb5vg3qffddly9wfaz"; depends=[oompaBase]; }; NightDay = derive2 { name="NightDay"; version="1.0.1.1"; sha256="1gwwxk428gkvci4dhfb3zikvidalpqkl0q2r6qpm58c12j14jk1h"; depends=[maps]; }; @@ -2776,6 +2789,7 @@ in with self; { NlinTS = derive2 { name="NlinTS"; version="1.3.8"; sha256="0wbwn33k774ib2849hr39fh89003jwpzimwlj1082zmjvssblc5c"; depends=[Rcpp Rdpack timeSeries]; }; NlsyLinks = derive2 { name="NlsyLinks"; version="2.0.6"; sha256="1kdqifwjkkk4x1ixg3ca6lbqx79ab907nnzwxca5iw721mbk5njg"; depends=[lavaan]; }; Nmisc = derive2 { name="Nmisc"; version="0.3.5"; sha256="1328sfxhkq1lyx8wx2k112iq9lxhg067gnk36vgxpcsq42vdzycr"; depends=[dplyr magrittr purrr rappdirs rlang stringr tibble tidyselect]; }; + NobBS = derive2 { name="NobBS"; version="0.1.0"; sha256="0i0jyny1c29knpcl4szqwyxvdc3dqjfk5lf2xvwjdx3qas92w03l"; depends=[coda dplyr magrittr rjags]; }; NoiseFiltersR = derive2 { name="NoiseFiltersR"; version="0.1.0"; sha256="0y90si8f5hsi273g10hw700r72la30hwqlwg59gaq76wqlkm8j0p"; depends=[caret e1071 kknn MASS nnet randomForest rJava rpart RWeka]; }; NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; }; NonCompart = derive2 { name="NonCompart"; version="0.4.5"; sha256="0z2iigr8nsyanx9lnf7hq5d5fbnm1kd3ir2scfhaqafxa8y8byq9"; depends=[]; }; @@ -2788,18 +2802,17 @@ in with self; { NormalBetaPrime = derive2 { name="NormalBetaPrime"; version="2.2"; sha256="03il9c57dbwgw38rzckkk0wkc37z8kfdrb7b4k471gm7mqhsm3m3"; depends=[GIGrvg glmnet HyperbolicDist MASS Matrix pracma pscl truncnorm]; }; NormalGamma = derive2 { name="NormalGamma"; version="1.1"; sha256="0r3hhfscif0sx9v8f450yf119gpvf3ilpb8n3ziy4v4qf2jlcfnk"; depends=[histogram optimx]; }; NormalLaplace = derive2 { name="NormalLaplace"; version="0.3-0"; sha256="0njgjdx2yvvy5jb5zn6zr7jdz5hck5bbkicv15z4ai4ibmckqjmh"; depends=[DistributionUtils GeneralizedHyperbolic]; }; - NormalizeMets = derive2 { name="NormalizeMets"; version="0.25"; sha256="0hnyr2aklibbvs6b6q4l0zbb9g8qmp2ds4lqic8a9alqn66sfnf2"; depends=[AUC crmn e1071 GGally ggplot2 htmlwidgets impute knitr limma plotly rmarkdown]; }; NostalgiR = derive2 { name="NostalgiR"; version="1.0.2"; sha256="0rpvwi815sdhaxqpji1y6g0vy8mkn5k6wci0a4jf54pkywwkwrwp"; depends=[txtplot]; }; Nozzle_R1 = derive2 { name="Nozzle.R1"; version="1.1-1"; sha256="05sjip4sz12mwd3jcbvk342p83kdmrd4l2jrh17p18w4l7w4nn0z"; depends=[]; }; - Numero = derive2 { name="Numero"; version="1.4.0"; sha256="11fviqs5smbb33qjqc463w5dz8avmba3243wcadj87j60rclqnri"; depends=[Rcpp]; }; + Numero = derive2 { name="Numero"; version="1.4.2"; sha256="1g9jbgygpr22lbikslkdmf7zphrcw826ijkc567av7c96nr9wkib"; depends=[Rcpp]; }; NutrienTrackeR = derive2 { name="NutrienTrackeR"; version="0.99.2"; sha256="1vzha3ywjbd877fqy3r2xkgi8m44s3ss65bij0vcc4mx8lajhgb5"; depends=[ggplot2]; }; OAIHarvester = derive2 { name="OAIHarvester"; version="0.3-0"; sha256="1c57jxb9n397wdkrirbfh70sxllrg9zsy0np698z7kcx83rz5lqr"; depends=[curl xml2]; }; OBMbpkg = derive2 { name="OBMbpkg"; version="1.0.0"; sha256="01wch8wwij3fd0jambk0hpkhlnp4ryrq8qnnr2w1iad9zssjyii5"; depends=[]; }; OBRE = derive2 { name="OBRE"; version="0.1-0"; sha256="1sxfb8mn0ky8x177l3v6wwcr96h5hfwd718h1akwrpir7acldchl"; depends=[pracma]; }; OBsMD = derive2 { name="OBsMD"; version="5.3"; sha256="10acj6d0nvf1zyirp001c2fhsg2gq33zywnp8w70gm1dk7pgzfzr"; depends=[]; }; OCA = derive2 { name="OCA"; version="0.1"; sha256="0kaf46gic8gp8f98y68kqvgm1baicwgvarfiwry1j0bd2rjad64d"; depends=[]; }; - OCNet = derive2 { name="OCNet"; version="0.1.1"; sha256="0s6r57flkgjj1j5lmgd2w34x0hifx3ia1h9sknk7i6l93w2w0a2y"; depends=[fields igraph rgdal rgl sp spam SSN]; }; - ODB = derive2 { name="ODB"; version="1.1.1"; sha256="1hha4rkbc2zh3karkqa0vn4v0nmcd7sljcymy1nh28bx1gx2ffgs"; depends=[DBI RJDBC]; }; + OCNet = derive2 { name="OCNet"; version="0.2.0"; sha256="00gyc7wgzqal2cgc5g7ssq1bkl44xsl4ia7s4kis9z4wz0slkj7i"; depends=[fields igraph rgdal rgl sp spam SSN]; }; + ODB = derive2 { name="ODB"; version="1.2.1"; sha256="0frkbl99ilpmppm4fm97lbkqhmjgcwlz9j5vh5nzzcsxrh8qwicn"; depends=[DBI RJDBC]; }; ODEnetwork = derive2 { name="ODEnetwork"; version="1.3.1"; sha256="0j6kw32hq9gfiwmyh4zxx7ibfxplhass7q309y8r656lkhvr9nin"; depends=[checkmate deSolve]; }; ODEsensitivity = derive2 { name="ODEsensitivity"; version="1.1.2"; sha256="0yddv5h3y0xfviqjgrbixawd00jc1rh9ngckfqka5j855vhchh66"; depends=[checkmate deSolve ODEnetwork sensitivity]; }; ODS = derive2 { name="ODS"; version="0.2.0"; sha256="0i7giibass7hadvv6mb7k9xrykgfss57jmm6gpbym8qcywhzq4ny"; depends=[cubature survival]; }; @@ -2832,29 +2845,27 @@ in with self; { OUwie = derive2 { name="OUwie"; version="1.57"; sha256="0faqyvap8jcz6k08k71lszns2h67csgd7q4s12fml153fm3lsjx9"; depends=[ape corHMM corpcor expm geiger lattice nloptr numDeriv paleotree phangorn phytools Rmpfr]; }; OWEA = derive2 { name="OWEA"; version="0.1.1"; sha256="00mx94v3krivsxha6sh13xhn2bdj77g8858vc4r2cy23ab4bg0g7"; depends=[gtools MASS shiny]; }; Oarray = derive2 { name="Oarray"; version="1.4-9"; sha256="04jng89s19rd8lbjm76wm4p4ggkffwnsa5qa60c4lwn2rj89a8a1"; depends=[]; }; - OasisR = derive2 { name="OasisR"; version="3.0.1"; sha256="1qc5zdxjdfayr9x239rrpc27rqnildix0mvc7p13ik5gzzddsxqr"; depends=[measurements outliers rgdal rgeos seg spdep]; }; Observation = derive2 { name="Observation"; version="0.2.0"; sha256="0v81manzcvv8x9hbf75c8klslzdabha53rasyba91vvcbrshhq6j"; depends=[AGread svDialogs]; }; OceanView = derive2 { name="OceanView"; version="1.0.5"; sha256="11gq15v3blisplbi6q6jgfsjbnbmfnyxdz8pq1ny9vgljzninvn1"; depends=[plot3D plot3Drgl rgl shape]; }; Ohit = derive2 { name="Ohit"; version="1.0.0"; sha256="132d4drc2phw9ppxnczb1ycdg3dv085k8p6bcaj3v866j0hfxjgb"; depends=[]; }; - OjaNP = derive2 { name="OjaNP"; version="0.9-12"; sha256="170hn5gx48n0i16cd5rwzs5inb4hsvqb7zwixxsg7pami6ild0vs"; depends=[ICS ICSNP Rcpp]; }; + OjaNP = derive2 { name="OjaNP"; version="1.0-0"; sha256="0xddspnnwlcxh2i66ilh6i920k53y7fv6m1hgj9h28qg2wy0vyah"; depends=[ICS ICSNP Rcpp]; }; OligoSpecificitySystem = derive2 { name="OligoSpecificitySystem"; version="1.3"; sha256="17mspf1ph2ybv046zckykfdcbrsiz40hrs6ib5mpwkfnrvsp1w7l"; depends=[tkrplot]; }; OmicKriging = derive2 { name="OmicKriging"; version="1.4.0"; sha256="08frr38yf5d0l3zwkbq9465xrbyzsn8sx9icqc3yvfnxrkhrpzig"; depends=[doParallel foreach irlba ROCR]; }; OmicsPLS = derive2 { name="OmicsPLS"; version="1.2.0"; sha256="108rp76g4cy7zaxv9q979rlv4pn9kb5i3f3iz29cdvxm55a55khv"; depends=[ggplot2 magrittr tibble]; }; Omisc = derive2 { name="Omisc"; version="0.1.2"; sha256="0ww83srfc7vr1gw2aaa5bahs6lvm11j4057hn06pclz1wb6fnbyw"; depends=[copula MASS psych]; }; OmnibusFisher = derive2 { name="OmnibusFisher"; version="1.0"; sha256="0x3q04g45nixgsrl4biqqi6bk4kx79spq5whm3n4ppr0nkv8dw4h"; depends=[CompQuadForm stringr survey]; }; OnAge = derive2 { name="OnAge"; version="1.0.1"; sha256="1zby5sf92c185b5m19jv4ndgbv6mz107nc47zn1d6bijrypzpc20"; depends=[]; }; - OncoBayes2 = derive2 { name="OncoBayes2"; version="0.5-8"; sha256="1nww1bshjg04zamh2jgmallm97xhdqs8vs7pbf3x8a7p2i3lcvnm"; depends=[abind assertthat bayesplot BH checkmate dplyr Formula ggplot2 RBesT Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; + OncoBayes2 = derive2 { name="OncoBayes2"; version="0.6-0"; sha256="10igxf1jys4v0l4r66j66266s8lwby7c0kyq1jdv2b6i2wvnrmfr"; depends=[abind assertthat bayesplot BH checkmate dplyr Formula ggplot2 RBesT Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; Oncotree = derive2 { name="Oncotree"; version="0.3.3"; sha256="147rc9ci66lxbb91ys2ig40sgmldi15p604yysrd4ccbxpbk2zwf"; depends=[boot]; }; OneArmPhaseTwoStudy = derive2 { name="OneArmPhaseTwoStudy"; version="1.0.3"; sha256="0q8g33s1jq0ipvwq83xhrly8idsh68licgyivxc628zbm1id5p38"; depends=[Rcpp]; }; OneR = derive2 { name="OneR"; version="2.2"; sha256="1k7rzhcwq5b2yi4zfsc1r0yb6w65gxj9835d2a1dclallja3zav2"; depends=[]; }; OneTwoSamples = derive2 { name="OneTwoSamples"; version="1.0-3"; sha256="0019rc2f4jmbm6sinkvalvjqwi822x78aiin88kg8qbbb5ml8l89"; depends=[]; }; - OpVaR = derive2 { name="OpVaR"; version="1.0.5"; sha256="14kq95i8n0g1wy3s32llw3803qzkxlyz9307clc1bwzi0wp22x5f"; depends=[actuar evmix goftest MASS pracma ReIns tea truncnorm vcd VineCopula]; }; OpasnetUtils = derive2 { name="OpasnetUtils"; version="1.3"; sha256="0mmn4dpk1wl8slg55xzhpk7jdwhkrka53rwmrsr73sikkh3mcyfn"; depends=[digest ggplot2 httpRequest igraph plyr RCurl reshape2 rgdal rjson sp triangle xtable]; }; - OpenCL = derive2 { name="OpenCL"; version="0.1-3.1"; sha256="0vxfsvin35idgvmc22178bq0r5193pdzba3wwv9djz52fzbj7zys"; depends=[]; }; + OpenCL = derive2 { name="OpenCL"; version="0.2-1"; sha256="1bhnqwrb8phldk5hr06iyvw8fx03x01ddqr4y5zs4a1wpyah7j2w"; depends=[]; }; OpenImageR = derive2 { name="OpenImageR"; version="1.1.6"; sha256="1yl7xvb86vxyf8d5g58hhmrva0gyg8iabb9npsdlnl8j0bg5gfiw"; depends=[jpeg png R6 Rcpp RcppArmadillo shiny tiff]; }; OpenML = derive2 { name="OpenML"; version="1.10"; sha256="132swv22ymm0wxq8y65y2niq8chmga1mnl1lgn6m3cgljvwad47r"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise stringi XML]; }; OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; }; - OpenMx = derive2 { name="OpenMx"; version="2.15.5"; sha256="1wbzhmyb1lnk39dkcyccmblxvniwsghh0jd94x05pk6yrcq8im5v"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; + OpenMx = derive2 { name="OpenMx"; version="2.17.3"; sha256="1s2pcg281ag3qz2wz8yi826f2d3kj3qg916js7zz0nsrljcyv5bc"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.12"; sha256="02p9b2y99z9yrrm2pl86p0yqwah0yjic2wdcd4k0mhccimmmkaip"; depends=[abind colorspace GPArotation openxlsx plyr psych pvclust rgl stringr XML]; }; OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.4"; sha256="0kyv14lxi86n6aba4jqmsfpmn075k0ki34q6gkkvhq8yv48wg831"; depends=[ggplot2 raster rgdal rJava sp]; }; Opportunistic = derive2 { name="Opportunistic"; version="1.2"; sha256="0kaj11ziij1v65l972x4kbr7vzkx4dwa27ymabiip4dg57a976wr"; depends=[]; }; @@ -2870,7 +2881,7 @@ in with self; { OptimalDesign = derive2 { name="OptimalDesign"; version="1.0.1"; sha256="02vxxb25q7fl73y7zq0a89ra0s88wji4mrql7p88014p073lj2as"; depends=[lpSolve Matrix matrixcalc matrixStats plyr quadprog rgl]; }; OptimalTiming = derive2 { name="OptimalTiming"; version="0.1.0"; sha256="1mchb7wdk1v56la30ivi40aq6zma64lrdb94d64d0s7x67m8315w"; depends=[mstate survival]; }; OptionPricing = derive2 { name="OptionPricing"; version="0.1"; sha256="0j98h3fn29xfv7xyp7av459v56chw99pnvmsbqvrv4g77p60f5q2"; depends=[]; }; - Orcs = derive2 { name="Orcs"; version="1.2.0"; sha256="0fwji4w2089zlcjbsbz9pmy54ryl4y10kxms836v1dxrjc5az3sp"; depends=[bookdown knitr lattice latticeExtra plotrix raster Rcpp remotes rgdal sf sp]; }; + Orcs = derive2 { name="Orcs"; version="1.2.1"; sha256="0n693m8z0j4irk9zj6d1gpbn2vhfbfpf7z6iyx19iim3g242823q"; depends=[bookdown knitr lattice latticeExtra plotrix raster Rcpp remotes rgdal sf sp]; }; OrdFacReg = derive2 { name="OrdFacReg"; version="1.0.6"; sha256="16mavsmp6d8rfmimmp5ynwyzir0gycpg8rhd8cwanlrndyclqlpv"; depends=[eha MASS survival]; }; OrdMonReg = derive2 { name="OrdMonReg"; version="1.0.3"; sha256="1xca8pvvq79j484l2rmn4nva8ncx8z51g5diljikck231y8qjqaz"; depends=[]; }; OrdNor = derive2 { name="OrdNor"; version="2.2.1"; sha256="01w97ssdi6m6sdc0n3rvd9h42nri5ba1kzwb1643pijcgz3vl2b8"; depends=[corpcor GenOrd Matrix mvtnorm]; }; @@ -2887,11 +2898,10 @@ in with self; { OwenQ = derive2 { name="OwenQ"; version="1.0.3"; sha256="0kra8pvz21kqwzwsrqh6vwfyq9qqrar3glcycd2gip19273whdim"; depends=[BH Rcpp RcppEigen RcppNumerical]; }; OxyBS = derive2 { name="OxyBS"; version="1.5"; sha256="11l3gm0jvw993jb13f6kpv77m6z0d1jswscma2v28qzkw053r3dc"; depends=[]; }; PAC = derive2 { name="PAC"; version="1.1.1"; sha256="07f83i43nxf1s2c26kkpcv4iyq517w20y1l7yg41wnmbfi9xlk7s"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; }; - PACBO = derive2 { name="PACBO"; version="0.1.0"; sha256="1v3j5bgvf0wh8s4d2yyz0fkc3acdwjlicwnbh1r241b1742x79cb"; depends=[mnormt]; }; PACLasso = derive2 { name="PACLasso"; version="1.0.0"; sha256="1qzzymhfsjy8mk0r0xpd5h4wrx4wk8gq3vi6fnawkq5xkrg26rld"; depends=[lars limSolve MASS penalized quadprog]; }; - PACVr = derive2 { name="PACVr"; version="0.8.2"; sha256="0bqv0zhcyp5v1wln11kkvygdwd70yrixd9cbm5fvjqkmmdvmnrv0"; depends=[BiocGenerics genbankr optparse RCircos]; }; - PAFit = derive2 { name="PAFit"; version="1.0.1.6"; sha256="134dl2hdk8nk0bkjzlln1k9q07m9cfnxqgs4p9sk4r6rwxza5xpg"; depends=[igraph knitr magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; - PAFway = derive2 { name="PAFway"; version="0.1.2"; sha256="1sdfw9j6pzbnnhh3ghx7vkynd3523ayaimmpkidb300hdkblln6a"; depends=[GGally ggplot2 gplots igraph network scales sna]; }; + PACVr = derive2 { name="PACVr"; version="0.9.2"; sha256="0pn4k1yxja0blc89ksmhn7pwn3p647hvn6zmi7d0k47dfzy5rch5"; depends=[BiocGenerics Biostrings genbankr GenomicAlignments optparse RCircos]; }; + PAFit = derive2 { name="PAFit"; version="1.0.1.8"; sha256="12rqf7mcbsc4ngq75gw8nrllqc2nd9l5p8jdnx6gjn26ldydg6h6"; depends=[igraph knitr magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; + PAFway = derive2 { name="PAFway"; version="0.1.3"; sha256="1ggmqbls8i5zqihzi66kaw09bbip2spiiizfzkx7amcvpm8zsr7r"; depends=[GGally ggplot2 igraph network scales sna]; }; PAGI = derive2 { name="PAGI"; version="1.0"; sha256="01j1dz5ihqslpwp9yidmhw86l112l7rfkswmf03vss872mpvyp3f"; depends=[igraph]; }; PAGWAS = derive2 { name="PAGWAS"; version="2.0"; sha256="0bz47ivd32kx1amgqllqbxyyvj773q7wasgk924hmibabiixa8nx"; depends=[foreach lars mnormt]; }; PAMA = derive2 { name="PAMA"; version="0.1.0"; sha256="19mz37h1kcfff7fkshg6qzgwm9vqgbzwjkcs5ydd1v6xq37lzapm"; depends=[mc2d PerMallows]; }; @@ -2924,11 +2934,11 @@ in with self; { PCFAM = derive2 { name="PCFAM"; version="1.0"; sha256="196jzv0f6j60zkyagm9n98339ipn8mrhmhl3q4g053z8f6mm9zmv"; depends=[]; }; PCGSE = derive2 { name="PCGSE"; version="0.4"; sha256="0ky1nzhz6v9n34kas9nw2scc6ip7av19g09zcsxaa9436nhip4f6"; depends=[MASS RMTstat safe]; }; PCICt = derive2 { name="PCICt"; version="0.5-4.1"; sha256="17ipmv6ps7c9dv4k9kxjjynnlgr63baz9z9ndwfg0lckc3vw81ya"; depends=[]; }; - PCIT = derive2 { name="PCIT"; version="1.5-3"; sha256="0gi28i2qd09pkaja4w7abcl7sz43jnk98897vc2905fnk9nks65j"; depends=[]; }; PCMBase = derive2 { name="PCMBase"; version="1.2.11"; sha256="010188p7f4nr5jxayq02a8q2r23a9w9rd6njxckca99d903cpwg5"; depends=[ape data_table expm ggplot2 mvtnorm xtable]; }; + PCMBaseCpp = derive2 { name="PCMBaseCpp"; version="0.1.8"; sha256="0h0l5ji5hp15ibfpwncyw2gyah80y2gr2z5br4jlzakvc5y3hqbf"; depends=[abind data_table PCMBase Rcpp RcppArmadillo]; }; PCMRS = derive2 { name="PCMRS"; version="0.1-1"; sha256="10n4am4qm23aaghf8awv2llcq7392s62yr6mf5h8nf18hfz29wrn"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; }; PCPS = derive2 { name="PCPS"; version="1.0.7"; sha256="0gxymz0yws1q1bxkpxi0lmbv57xx62h3dl7z3i2cnbagswkax3zh"; depends=[ape nlme phylobase picante RcppArmadillo SYNCSA vegan]; }; - PCRedux = derive2 { name="PCRedux"; version="1.0-4"; sha256="1p62brjmvpahxksjnmlfp8flk4yscpvl0g0j5alwp6wqndn2qxcl"; depends=[bcp changepoint chipPCR ecp fda_usc MBmca pbapply pracma qpcR robustbase shiny zoo]; }; + PCRedux = derive2 { name="PCRedux"; version="1.0-6"; sha256="0s7g6y8iw4w42ihpiqqhbgwaf4fim91pwsp8hh7fh5nawj2wg9k7"; depends=[bcp changepoint chipPCR ecp fda_usc MBmca pbapply pracma qpcR robustbase shiny zoo]; }; PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; }; PCSinR = derive2 { name="PCSinR"; version="0.1.0"; sha256="1z8yjryw3c43vc6fxcwiindmyq6r63pc1zr3aybwmys6mv697bb4"; depends=[]; }; PCovR = derive2 { name="PCovR"; version="2.7"; sha256="00920h0qlw81vwh46inmvm4mdv0dfd8xvqvrj7l038hhmjb7qsjz"; depends=[GPArotation MASS Matrix ThreeWay]; }; @@ -2944,37 +2954,36 @@ in with self; { PEMM = derive2 { name="PEMM"; version="1.0"; sha256="18dd9hsbdrnhrrff7gpdqrw2jv44j8lg0v3lkcdpbd4pppcaq84h"; depends=[]; }; PGEE = derive2 { name="PGEE"; version="1.5"; sha256="1qcxbqnbpplnfjy83nm9fj9y4abzgbxnsggzx7ix3vb9qs18cdwh"; depends=[MASS mvtnorm]; }; PGM2 = derive2 { name="PGM2"; version="1.0-1"; sha256="03282pcq7gw47awc2mxjsbz6w3zpqjhqd7fzg8la4p00cd0vvmr4"; depends=[]; }; - PGRdup = derive2 { name="PGRdup"; version="0.2.3.4"; sha256="1arviyjmvbkiv4fwfs155360p3fnfqsdnhrjdn0r2pgzmsb66i1y"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; + PGRdup = derive2 { name="PGRdup"; version="0.2.3.5"; sha256="11lq2l0j6l3ixi3fmz2gd0idypl18gkhqfwbgg41gzzwj92lsrq4"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; PHENIX = derive2 { name="PHENIX"; version="1.3.1"; sha256="1gd9ycrwawi81al4f5v559km1112giwqnwvvk8ynj4kdb5bqpyq4"; depends=[ppcor SuppDists]; }; - PHEindicatormethods = derive2 { name="PHEindicatormethods"; version="1.2.0"; sha256="1x7wf1yhl2yvdmgv88z7ak6ihdjhyrm81wphnk2wpgsg6b4m9g12"; depends=[broom dplyr purrr rlang tidyr]; }; + PHEindicatormethods = derive2 { name="PHEindicatormethods"; version="1.3.0"; sha256="1skjmrbqh5jm9h7nsgw91bq1ca8jyp59r97m4pd4aahcslab4zaq"; depends=[broom dplyr purrr rlang tidyr]; }; + PHInfiniteEstimates = derive2 { name="PHInfiniteEstimates"; version="1.1"; sha256="1p0z41sss1lll51lfhinsk112q3i0mhkmg47vzpkqfdksdcrm0ix"; depends=[coxphf lpSolve mlogit Rdpack survival]; }; PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.10"; sha256="17q760k5519alr2skvpnghz3c9jgw07lh5fpw4xf6hjk3qlqq82c"; depends=[]; }; PHeval = derive2 { name="PHeval"; version="0.5.4"; sha256="06fy5dm4mnp29f01163rw1d1hyl7rlcp4pfw18s87ckpr931qyma"; depends=[survival]; }; - PIGE = derive2 { name="PIGE"; version="1.1"; sha256="0pc24rvvxzpgrsx7xsj98n5vd462hjggakzwp36qdkib69yyr4bn"; depends=[ARTP snowfall survival xtable]; }; PIGShift = derive2 { name="PIGShift"; version="1.0.1"; sha256="115dnsh4b1rxx1d2kc8x3vl5366h5f0i6gg8l1w3v0f8309qigis"; depends=[ape mvtnorm]; }; PINSPlus = derive2 { name="PINSPlus"; version="2.0.0"; sha256="0glyc9hw3s87h38r4wp8mgk9gqm4x408yf5iaf1yk5yjg9yqb1a1"; depends=[cluster doParallel entropy foreach pbmcapply]; }; PIPS = derive2 { name="PIPS"; version="1.0.1"; sha256="1c5v3s6xys9p1q32k6mpsffhi9gwsq951rh12hs76dmak862yspc"; depends=[]; }; PK = derive2 { name="PK"; version="1.3-4"; sha256="1zkjq64p34gzbsbmbdqphssnplzz65wpl486qf4yhawnb4wnkj1v"; depends=[]; }; PKI = derive2 { name="PKI"; version="0.1-5.1"; sha256="1xs3jxbczhkxnp7cyw2yh1jcwha92y9pdsbka1ligbla70bnvxyj"; depends=[base64enc]; }; - PKNCA = derive2 { name="PKNCA"; version="0.9.1"; sha256="0b9ar6d487b7klvavv6c10q9a8q6ads8bv9x3pb5359jxbfilm3q"; depends=[digest dplyr nlme rlang tidyr]; }; + PKNCA = derive2 { name="PKNCA"; version="0.9.2"; sha256="091gxv2ajrlxh73rwim6miz4pzpix5917f40hh6wz25c7fkdbafs"; depends=[digest dplyr nlme rlang tidyr]; }; PKPDmisc = derive2 { name="PKPDmisc"; version="2.1.1"; sha256="1p47zdhilprzcwarfmisq7g7znr73wgxns43mn3d7w5sv671mygv"; depends=[BH data_table dplyr ggplot2 lazyeval magrittr purrr Rcpp readr rlang stringr tibble]; }; PKPDmodels = derive2 { name="PKPDmodels"; version="0.3.2"; sha256="1h893civ77ahbgjnc6kq3l7rszmqmx9dlxwavldigpq3r79vd86k"; depends=[]; }; - PKconverter = derive2 { name="PKconverter"; version="1.3"; sha256="1ddhj1qwdwr6g89q55l9njm1ms1wr80d56klz50ai9xvb91qzn89"; depends=[shiny shinydashboard shinythemes]; }; + PKconverter = derive2 { name="PKconverter"; version="1.5"; sha256="1zk2sjrjhq7n2k2p29r2qc6qdghr3riyjvvawz0g74lidg7hm1ly"; depends=[shiny shinydashboard shinythemes]; }; PKgraph = derive2 { name="PKgraph"; version="1.7"; sha256="0g36cdv5cblqx69j48irxjc5nlw2cl3p714mlsblnd3362z1brwn"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 lattice proto rggobi RGtk2]; }; PKreport = derive2 { name="PKreport"; version="1.5"; sha256="16hss9migbxpnw5f9gcw1nlvb81iyji00ylx5wd6kdwhz0ids9wj"; depends=[ggplot2 lattice]; }; PLIS = derive2 { name="PLIS"; version="1.1"; sha256="0b81s7677wglqvv1b5lx8k2iaks09kz0wrl07245a7j2pk9nxv7p"; depends=[]; }; PLMIX = derive2 { name="PLMIX"; version="2.1.1"; sha256="05mnzsi7y71cvg50qx8hp4m31gqslldl34k41r1f8npyb6ldpdca"; depends=[abind coda foreach ggmcmc ggplot2 gridExtra gtools label_switching MCMCpack PlackettLuce pmr prefmod radarchart rankdist rcdd Rcpp reshape2 StatRank]; }; - PLNmodels = derive2 { name="PLNmodels"; version="0.9.4"; sha256="1a2rdh4hz6pj28ahzwygyd5l44wcsqhsl4rqrnbnlnzabvs6fp9n"; depends=[corrplot dplyr ggplot2 glassoFast gridExtra igraph magrittr MASS Matrix nloptr R6 Rcpp RcppArmadillo tidyr]; }; + PLNmodels = derive2 { name="PLNmodels"; version="0.9.5"; sha256="0a80jjswdca3h1hkp39smavwbq47s0ydp04nb5jcj4yy4v1b9rx5"; depends=[corrplot dplyr ggplot2 glassoFast gridExtra igraph magrittr MASS Matrix nloptr R6 Rcpp RcppArmadillo tidyr]; }; PLRModels = derive2 { name="PLRModels"; version="1.1"; sha256="0dwnzfw7a1cxz9s00kxf19jmjsc8cy6cc9q2mjqf8z7690wrg7hb"; depends=[]; }; PLSbiplot1 = derive2 { name="PLSbiplot1"; version="0.1"; sha256="1l8d1k913ic0qwxvrrd447p5ni3mzc6v9lv45b7vqrpzkxdci6gy"; depends=[]; }; PLmixed = derive2 { name="PLmixed"; version="0.1.4"; sha256="1plkcv7k6jijywhxrsx2lxcbavzvagzl8wnz132nqq619wvb57ia"; depends=[lme4 Matrix numDeriv optimx]; }; PLordprob = derive2 { name="PLordprob"; version="1.1"; sha256="1g23h3121g9csr85falm6vgzbva42wz3skhfr2rxmvlc3ca4afyp"; depends=[mnormt]; }; - PMA = derive2 { name="PMA"; version="1.2"; sha256="0cmhkkkgwxi52cprxpx8kljfaz1a3pcinwcjp17b9j9xd9nd0kkv"; depends=[]; }; + PMA = derive2 { name="PMA"; version="1.2.1"; sha256="1rhiylm3jfarnqdkv7nwg536sgsa30ic80dk9byks9w0wf4mn59s"; depends=[]; }; PMCMR = derive2 { name="PMCMR"; version="4.3"; sha256="09bvdj2h1086r2cgy3myrhlylplxxlliv8nwx09c8kb1vn02i2ij"; depends=[]; }; - PMCMRplus = derive2 { name="PMCMRplus"; version="1.4.2"; sha256="0n71q8kcmk1ibqn0fq9p60xrxx1dg7hszn11i51cmsx9695wwk28"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; - PML = derive2 { name="PML"; version="1.1"; sha256="11fl7qm98n5wlfwczb6vzj9hswq7mqmb09nh9wl7986jp2wbrjlw"; depends=[dplyr rbokeh tibble tidyr trelliscopejs]; }; - PMmisc = derive2 { name="PMmisc"; version="0.1.2"; sha256="03bavk7ylmrrcc49zy9fb2q08w6138b3srxa4x038syr115k3l6k"; depends=[ggplot2 robust]; }; - PMwR = derive2 { name="PMwR"; version="0.12-0"; sha256="1w3zz3sh06vbyzngcpm52izi2ymnfy897q2zz7vrb6r8xxcbrlwi"; depends=[datetimeutils fastmatch NMOF orgutils textutils zoo]; }; - PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.5.0"; sha256="1b9p7r588klxmwcszffcmn37w5r29n4ab2f54xm23lnlpix80yg6"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; }; + PMCMRplus = derive2 { name="PMCMRplus"; version="1.4.4"; sha256="1myj2hf1sx32j6hcql1zrbxkibg6l0qggcnrpsr2y40kzbw463pi"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; + PML = derive2 { name="PML"; version="1.2"; sha256="0r4mfnkbg7chrnm3lb78hjcz25fal6vvvqwvnzvicl46mdhl94yb"; depends=[dplyr rbokeh tibble tidyr]; }; + PMwR = derive2 { name="PMwR"; version="0.14-0"; sha256="15qfpsnnak8qf41cfq3n4g6iwxnzbifxqm50pnbk76v6727s21hy"; depends=[datetimeutils fastmatch NMOF orgutils textutils zoo]; }; + PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.6.0"; sha256="1xwjw8wcr0xys3bwk7aj0rih2nzdw86rja7fwqis2rfcbk9r8cim"; depends=[dplyr magrittr RCurl readr readxl survey tibble timeDate]; }; POCRE = derive2 { name="POCRE"; version="0.5.0"; sha256="0aph1lmb0xkzm4l4ah2wrx13d138igf4k4w9wb9lca4vv6m7xzqf"; depends=[EbayesThresh ggplot2 pracma]; }; POD = derive2 { name="POD"; version="1.1.4"; sha256="0ivq7jpnyb5zvvi2dx788cawrsh26hyp8j0a8mkfcsnhyhhs7hnb"; depends=[]; }; POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; }; @@ -2985,7 +2994,7 @@ in with self; { POUMM = derive2 { name="POUMM"; version="2.1.6"; sha256="16yiymfaci9zklbx3klf3nn9xlf305mdbq5n1ccx4w7g7h0ivdi1"; depends=[adaptMCMC ape coda data_table foreach ggplot2 lamW Rcpp]; }; PP = derive2 { name="PP"; version="0.6.2"; sha256="1y6f8pnvdp59xnm0vh1rjhcxy3nyd3il7r76yyrrfamdr42hh8lc"; depends=[Rcpp]; }; PP3 = derive2 { name="PP3"; version="1.2"; sha256="1g36al9w1rxyhfzbvpw9siqq57h2xl0zr94wysz8i0jzqkkqkrvf"; depends=[]; }; - PPCI = derive2 { name="PPCI"; version="0.1.4"; sha256="18q9jjmmmmghwyzpj42k7xa55anvbg1jnqs2y6c5jzlb2cw3ga4h"; depends=[rARPACK]; }; + PPCI = derive2 { name="PPCI"; version="0.1.5"; sha256="141811iq0g2rq7lxpz9a44kyjfylj85yqgcjq7b23xfg2wbcp8dd"; depends=[rARPACK]; }; PPMR = derive2 { name="PPMR"; version="1.0"; sha256="07fky5xc1dmmn23wwdjm46c86i7q20dv5f2147828v52hhky873g"; depends=[Rcpp RcppArmadillo]; }; PPQplan = derive2 { name="PPQplan"; version="1.0.0"; sha256="159mgwd2d7qzfwj6dnxr77p0fm7rgq9bpks2ra54s446cm4ahgkd"; depends=[ggplot2 plotly tolerance]; }; PPRL = derive2 { name="PPRL"; version="0.3.5.2"; sha256="083al6xi9b62vbx71684bxq2xynvmxw25ak01gwngln1r84gsz5l"; depends=[Rcpp settings]; }; @@ -3019,11 +3028,10 @@ in with self; { PSLM2015 = derive2 { name="PSLM2015"; version="0.2.0"; sha256="1f8kzlqil2ac8a9fbj9fhdni2narh2yaaz044mlx7gsv2ns3ai19"; depends=[dplyr ggplot2 magrittr]; }; PSPManalysis = derive2 { name="PSPManalysis"; version="0.2.2"; sha256="0g59r13nc6w4a4gkjxnvkygp9hax1sw34a5rv6r170gwdj9fiswq"; depends=[pkgbuild]; }; PST = derive2 { name="PST"; version="0.94"; sha256="0f28zrnlficbi9iil6wbh51k9mghpkz63hw05lpmlpx1yl5nd0a6"; depends=[RColorBrewer TraMineR]; }; - PSTR = derive2 { name="PSTR"; version="1.2.4"; sha256="0d1j7khd0fx9fapak6arigzprsl8f5jadspbyzym4g2a78m7cnnq"; depends=[ggplot2 magrittr plotly snowfall tibble]; }; PSW = derive2 { name="PSW"; version="1.1-3"; sha256="0ahm7rp795d7j88n15b3q0gl573p3g0krc7jd1zv87g4bsdc9b5x"; depends=[gtools Hmisc]; }; PTAk = derive2 { name="PTAk"; version="1.3-34"; sha256="0ylnag492v1n0pmzsz73w12frhv8c3r3dxgarf58ny0ir0i0ywvl"; depends=[tensor]; }; PTE = derive2 { name="PTE"; version="1.7"; sha256="1azkrij4kfmvp03lnzm88gwgvz8g54jq94j0qg8ynxvyjzrppc98"; depends=[doParallel foreach survival]; }; - PTXQC = derive2 { name="PTXQC"; version="1.0.0"; sha256="1jybr5smjnc2mm02f13gkcpapaxjqj8ajc6sswy9b23fbcbqzlkw"; depends=[data_table ggdendro ggplot2 gtable kableExtra knitr plyr RColorBrewer reshape2 rmarkdown seqinr UpSetR yaml]; }; + PTXQC = derive2 { name="PTXQC"; version="1.0.2"; sha256="19gm7a9p74xb9qcyyy7hrd2m236mss61skbrnqdcs0678ahp1l2z"; depends=[data_table ggdendro ggplot2 gtable kableExtra knitr plyr RColorBrewer reshape2 rmarkdown seqinr UpSetR yaml]; }; PTwins = derive2 { name="PTwins"; version="0.1.1"; sha256="166mc7w52n9d3n72h5jvvhbki87prkils3yigdf57dn9pyixrd66"; depends=[]; }; PUPAIM = derive2 { name="PUPAIM"; version="0.1.0"; sha256="0lkfp1jlcf0m0h7hqvbcr0sq0kbdwpvqvz52rs8j5n7ywiky4q3i"; depends=[FSA Metrics minpack_lm]; }; PUlasso = derive2 { name="PUlasso"; version="3.2.3"; sha256="07jf81q898833qswwairkv21dxlz7890219fdgnw3ywgp5kvlp41"; depends=[doParallel foreach ggplot2 Matrix Rcpp RcppEigen]; }; @@ -3051,20 +3059,20 @@ in with self; { PanCanVarSel = derive2 { name="PanCanVarSel"; version="0.0.3"; sha256="06xkzg2kvyr6ivm1z71x2pk20j37h36sx6kf4kmc8q50cq73k9jl"; depends=[Matrix msm mvtnorm smoothmest]; }; PanJen = derive2 { name="PanJen"; version="1.6"; sha256="18cl9rls98v286kk6lyxxws3w59zpzgmqi5250gdgcf71xy2lhvm"; depends=[mgcv]; }; PanelCount = derive2 { name="PanelCount"; version="1.0.9"; sha256="1b6c83qypjc3ylvhh24xm4pjk8w34s24v0i9ddlmg92f1518hlkj"; depends=[Rcpp RcppArmadillo statmod]; }; + PanelMatch = derive2 { name="PanelMatch"; version="1.0.0"; sha256="02nsi5bhzqdn3v164f70xs0lll929gi602jw2b1xza7wcszdchfd"; depends=[CBPS data_table ggplot2 MASS Matrix Rcpp RcppArmadillo RcppEigen]; }; Paneldata = derive2 { name="Paneldata"; version="1.0"; sha256="00hk340x5d4mnpl3k0hy1nypgj55as2j7y2pgzfk3fpn3zls5zib"; depends=[]; }; - ParBayesianOptimization = derive2 { name="ParBayesianOptimization"; version="0.2.0"; sha256="1sgb0wrk9h52v55qc4q0r11b7x7cjmjfk1klmmvigpjlz1dycz7k"; depends=[crayon data_table dbscan foreach GauPro ggplot2 lhs plotly]; }; + ParBayesianOptimization = derive2 { name="ParBayesianOptimization"; version="1.1.0"; sha256="1famkdri08qsamn5ji4knq42pj8z4lkhacbr8mbj439hkmpsfxkv"; depends=[crayon data_table dbscan DiceKriging foreach ggplot2 ggpubr lhs plotly]; }; ParDNAcopy = derive2 { name="ParDNAcopy"; version="2.0"; sha256="017xwznhfibi8kp0ifww02c0qcq0vxs06rjww4kcp2bvdmld8kc4"; depends=[DNAcopy]; }; ParallelLogger = derive2 { name="ParallelLogger"; version="1.1.1"; sha256="0z2a777536yvqcypzxis7j4k3ns5v4lwdrkib9zx1ngxxzv6k9xn"; depends=[jsonlite snow XML]; }; ParallelPC = derive2 { name="ParallelPC"; version="1.2"; sha256="07y7xb16865khxkvwsk1yglzyy7ja4aj2wpkipaz48i77c3x8bi2"; depends=[]; }; ParallelTree = derive2 { name="ParallelTree"; version="0.1.3"; sha256="1h53qwhc63fglm452b3by7f3g6f3hyqwkmwmbdqdb9rv3j4gvnvg"; depends=[ggplot2]; }; ParamHelpers = derive2 { name="ParamHelpers"; version="1.13"; sha256="0yaf899yhia2773lkq5a16wz6srpsx7xzkbgf421ai2z90m23ddr"; depends=[backports BBmisc checkmate fastmatch]; }; - ParentOffspring = derive2 { name="ParentOffspring"; version="1.0"; sha256="117g8h0k65f2cjffigl8n4x37y41rr2kz33qn2awyi876nd3mh93"; depends=[]; }; - Pareto = derive2 { name="Pareto"; version="1.1.0"; sha256="07gvvcpcqr884xnd2kq4zn3c27h1xkx51qp1w3vfsqqccqdi08jw"; depends=[]; }; + Pareto = derive2 { name="Pareto"; version="1.1.3"; sha256="0iqagvdysp6fjd9hmrya93i64jijl894f5kkcvbbhdjfsz719pk5"; depends=[]; }; ParetoPosStable = derive2 { name="ParetoPosStable"; version="1.1"; sha256="1fwji5wrhbxr089dll812csamvb5q2pxn1607rpirarifgfbj28m"; depends=[ADGofTest doParallel foreach lmom]; }; PartCensReg = derive2 { name="PartCensReg"; version="1.39"; sha256="0blzv57cbxqghkz4fc3plvrcw80g0kx17dzmajkfv598m1wm6hc8"; depends=[Matrix optimx ssym]; }; Partiallyoverlapping = derive2 { name="Partiallyoverlapping"; version="2.0"; sha256="0pb0digyigqyzb0zqikgz002kqf1xprcjhxr62a7iqbzy1yycayf"; depends=[]; }; PathSelectMP = derive2 { name="PathSelectMP"; version="1.1"; sha256="036b70bpylmibny6dny79f7gdzn78arqgl2hfs031vygw63yyh9b"; depends=[mice MplusAutomation]; }; - PatternClass = derive2 { name="PatternClass"; version="2.0.0"; sha256="0z2qbg8diskk33ffiqkhkkp5va1p56cij2a6yqfhybrrcxizliw1"; depends=[landscapemetrics raster]; }; + PatternClass = derive2 { name="PatternClass"; version="2.0.1"; sha256="1xwlk6shms38nqxad3d15254wgnkfzy7jyf5w9bbm96kg05mndbz"; depends=[landscapemetrics raster]; }; Patterns = derive2 { name="Patterns"; version="1.2"; sha256="1dfy0jxr4h17j00yf2lfxlczvx6sdjz08hqsrj6r26qz3g6f16br"; depends=[abind animation Biobase c060 cluster elasticnet glmnet gplots igraph jetset KernSmooth lars lattice limma magic Mfuzz movMF msgps nnls pixmap plotrix SelectBoost spls survival tnet VGAM WGCNA]; }; PdPDB = derive2 { name="PdPDB"; version="2.0.1"; sha256="05aqg0rqrnlmvjxa32ms1vywgwhw5zlfkyf2ij0fn06rp8l2z3lv"; depends=[dendextend plyr tseries]; }; Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; }; @@ -3079,14 +3087,13 @@ in with self; { PeerPerformance = derive2 { name="PeerPerformance"; version="2.2.1"; sha256="1igh8svdbxkcfgi2s70cpwdcy7jb4yhxias80vck203skyiq97vx"; depends=[lmtest sandwich]; }; PenCoxFrail = derive2 { name="PenCoxFrail"; version="1.0.1"; sha256="0snjf8jxzyf30xj3wx9p6g073dqw592l1j1c6yxfg8y4kgzhzwq7"; depends=[Matrix Rcpp RcppArmadillo survival]; }; PenIC = derive2 { name="PenIC"; version="1.0.0"; sha256="0vcqawmbm8z6lkcxfq1b2png9viz5q669npbv0s7dn6smwhanlzz"; depends=[MASS Matrix numDeriv]; }; - PepPrep = derive2 { name="PepPrep"; version="1.1.0"; sha256="1s2xn05xry50l9kf1mj6yd1dpc7yp6g3d00960hswvhznb0a4l84"; depends=[biomaRt stringr]; }; PepSAVIms = derive2 { name="PepSAVIms"; version="0.9.1"; sha256="0m4jrq6wcjy0k80gvrnm9f7kvi1ifx9182xfq0psyaxpj0ggvzij"; depends=[elasticnet]; }; Peptides = derive2 { name="Peptides"; version="2.4.1"; sha256="05xhimjw7kdga07ycgwz6mq5ppcx04zy00mx5fvavp314zrqxnsv"; depends=[Rcpp]; }; PerFit = derive2 { name="PerFit"; version="1.4.3"; sha256="0qmh78wrx3vzz41z30db3bb62n325blphjhpzdzykfx77gr8plyr"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; PerMallows = derive2 { name="PerMallows"; version="1.13"; sha256="0ny2vc8f0npixaw1kp2d93xr4g46nsg8jjwvi6afv9xjvaz0i6wy"; depends=[Rcpp]; }; - Perc = derive2 { name="Perc"; version="0.1.3"; sha256="1wkhxwq15x2niabgnchr93h132ynswsjb81ignlk1rsqppm4hkr5"; depends=[]; }; + Perc = derive2 { name="Perc"; version="0.1.4"; sha256="0i3b7glnrv6vpc4zxkalh0ad0rf26dl2zwcgl86pz80qmzll8m9r"; depends=[]; }; PerfMeas = derive2 { name="PerfMeas"; version="1.2.1"; sha256="1x7ancmb41zd1js24rx94plgbssyc71z2bvpic6mg34xjkwdjw93"; depends=[graph limma RBGL]; }; - PerformanceAnalytics = derive2 { name="PerformanceAnalytics"; version="1.5.3"; sha256="0jhjldwyxwq7a47zmk5y1jjck7hvq92p8rlgjvdfy51hx2dmlqqd"; depends=[quadprog xts zoo]; }; + PerformanceAnalytics = derive2 { name="PerformanceAnalytics"; version="2.0.4"; sha256="0ci26hsj4wnw9g0mh4vrn0cg986cpcpx169rvw6v6rbnjxq718bq"; depends=[quadprog xts zoo]; }; PeriodicTable = derive2 { name="PeriodicTable"; version="0.1.2"; sha256="133rwbvapk99dmh3vi8p7sa81d7hjmy0g4a5hcmwr3mdq8jzgwrj"; depends=[]; }; PermAlgo = derive2 { name="PermAlgo"; version="1.1"; sha256="16fhdgr4nza9yknsbwiv8pgljfwp8hhva0crs4dbfd0w4j97n5fp"; depends=[]; }; PerseusR = derive2 { name="PerseusR"; version="0.3.4"; sha256="1k03flbnjndx5mm26hysk64z89858m50kjs8gyldm4s5f09iny6p"; depends=[Biobase plyr stringr XML]; }; @@ -3102,18 +3109,19 @@ in with self; { PhyInformR = derive2 { name="PhyInformR"; version="1.0"; sha256="10d720ww909b1xmdrms554pnn0757nzppnrniar4n157mh0qw7ms"; depends=[ape doParallel foreach geiger ggplot2 gplots gridExtra hexbin iterators PBSmodelling phytools RColorBrewer]; }; PhySortR = derive2 { name="PhySortR"; version="1.0.8"; sha256="19426xjdii74qds0wmq5sa88zys81nyqb9lvf9pfihbjgrjr770a"; depends=[ape phytools]; }; PhyloMeasures = derive2 { name="PhyloMeasures"; version="2.1"; sha256="01axs78s10y1bkx8dbs9vvnphdzik7hpibkwyib1x9mznmyg90hr"; depends=[ape]; }; - PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.3.0"; sha256="03yqdg4qfzqvykfwc9cgfxjaj4n57kwz95dfdq6zb7lc56gs69ms"; depends=[ape capushe foreach gglasso glmnet LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; + PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.4.0"; sha256="14a1lczwr8xhv27wqc88raj3yhy8gvflvxjrx8f5hlq15y3wfp4w"; depends=[ape capushe foreach gglasso glmnet LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; PhysActBedRest = derive2 { name="PhysActBedRest"; version="1.0"; sha256="0gmqh700cf6aiagb45iyyf85pgp3b86fx7fbv9lrsm4mda0r8h75"; depends=[chron lubridate stringr]; }; PhysicalActivity = derive2 { name="PhysicalActivity"; version="0.2-2"; sha256="14z6plgwyr46vs9m997rvlz8sdglfs9g087an8668zqkzzs2w4ln"; depends=[]; }; PieceExpIntensity = derive2 { name="PieceExpIntensity"; version="1.0.4"; sha256="023hq0gg1vi0j3yf8p5lisgs8wfp5qwyd4akxxzx7wad2985gxb3"; depends=[Rcpp RcppArmadillo]; }; Pijavski = derive2 { name="Pijavski"; version="1.0"; sha256="1027lmmk17br9zxah980j6l3k2p92065bwigw6gpy9g0g5jjl4f1"; depends=[Rcpp]; }; PivotalR = derive2 { name="PivotalR"; version="0.1.18.3.1"; sha256="1npfi5bdn0f4arp3wpi5ai21ad5fxx3lm7n5wjhvzvcyr6gl38as"; depends=[Matrix]; }; PlackettLuce = derive2 { name="PlackettLuce"; version="0.2-9"; sha256="1sv37wvvp44iwv4bpjhp3mnpyk77c60vi0xwrapzywszi222ynbl"; depends=[igraph Matrix partykit psychotools psychotree qvcalc RSpectra sandwich]; }; + PlaneGeometry = derive2 { name="PlaneGeometry"; version="1.1.0"; sha256="1yr0h2rasx0f7lp3vc30cmryfrsskbqdd1mdd5wv3w794y9fizs5"; depends=[gsl R6 sdpt3r stringr uniformly]; }; Planesmuestra = derive2 { name="Planesmuestra"; version="0.1"; sha256="0v7l4hrfckcf7zmk0ihq2ij0qli7x12j17vd6752d1yjk27fgk57"; depends=[]; }; PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.7.2"; sha256="0qra7q2pzw212qylyrfhv6zjcsldfw84b93cari0qjqnw4gyfph2"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; Plasmidprofiler = derive2 { name="Plasmidprofiler"; version="0.1.6"; sha256="10m3knmz0596rm30ncyfprar6l42bjm7r34n4pjz1biqmiz6yz6k"; depends=[ape dplyr gdata ggdendro ggplot2 gridExtra gtable htmlwidgets magrittr plotly plyr RColorBrewer reshape2 stringr]; }; Plasmode = derive2 { name="Plasmode"; version="0.1.0"; sha256="1qcni9zdckhsnw616jn7rdfd09kbl5wd4hljdja0w73jz1wd1z14"; depends=[arm epiDisplay foreign gbm glm2 lattice latticeExtra lme4 MASS Matrix mgcv nlme nnet RColorBrewer survey survival twang xtable]; }; - PlayerRatings = derive2 { name="PlayerRatings"; version="1.0-3"; sha256="16wff9kqcp462qxvhifyx942jp1i6vpsl2y0llph7ahfs8f0prjn"; depends=[]; }; + PlayerRatings = derive2 { name="PlayerRatings"; version="1.1-0"; sha256="04hdjv1gb5b3zym2ryjpqrqhs823nlkmbimfnxw1cfn921ljjgpj"; depends=[]; }; PlotContour = derive2 { name="PlotContour"; version="0.1.0"; sha256="0jjzrxmx1k1s8fyfs9m5a864pmvjh2bdklbhrc3nbhb0c7wd3h9z"; depends=[KernSmooth MASS]; }; PlotPrjNetworks = derive2 { name="PlotPrjNetworks"; version="1.0.0"; sha256="13kbyx2phxb3kss6l32f7krf4k5i350indlsmbhav686v0h3nsgp"; depends=[ggplot2 reshape2]; }; PlotRegionHighlighter = derive2 { name="PlotRegionHighlighter"; version="1.0"; sha256="0n1nkfr3sdaq6f5p9kgx4slrsvhpdbax3rinrkfkb1vnjj4swj77"; depends=[]; }; @@ -3128,18 +3136,19 @@ in with self; { PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.6.1"; sha256="12mchs62xq5jrq7y66l53yvwgm8iisa16120jmja0xdcr9sgcr84"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; PoisNonNor = derive2 { name="PoisNonNor"; version="1.6.1"; sha256="0pk1hqydpd6f8419kn986kf55gc3hyycfjyj1nvqsml7ic56ic98"; depends=[BB corpcor MASS Matrix]; }; PoisNor = derive2 { name="PoisNor"; version="1.3.1"; sha256="1s1z6bpxaa1ibdgv6bd5phccswd9bh26abwcywlnb55xl5vrgknv"; depends=[corpcor Matrix mvtnorm]; }; - PoissonBinomial = derive2 { name="PoissonBinomial"; version="1.0.0"; sha256="1yl01302r1b24qkanp8sd1n39s51yr0vyz99jrmpmdk2875zahi3"; depends=[BH Rcpp]; }; + PoissonBinomial = derive2 { name="PoissonBinomial"; version="1.0.2-1"; sha256="0b2skjh4a8kam2lmbj9gz122qj01vrcv2qgij26zjdmw2qy39dx2"; depends=[BH Rcpp]; }; PoissonPCA = derive2 { name="PoissonPCA"; version="1.0.2"; sha256="0rb30l0x8knwvh8li62cfxms9b20db77g4r8cwgwasb9jjljxv3s"; depends=[]; }; PoissonSeq = derive2 { name="PoissonSeq"; version="1.1.2"; sha256="1hhx0gv06cp6hm6h36mqy411qn9x15y45crpzbyf8crfs85c6gbg"; depends=[combinat]; }; PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.2"; sha256="1z1hwvsw7b6cz5xfy35a5ldrzb3fhp3swiyz56v1zqblpsaz8n9g"; depends=[gtools]; }; PolyTrend = derive2 { name="PolyTrend"; version="1.2"; sha256="17n6phkzgaqrlzs8x1l5smnij1gxfklr0zj9pqfy5n8xqnpwssm5"; depends=[]; }; - Polychrome = derive2 { name="Polychrome"; version="1.2.3"; sha256="1frh21813ffgax487bcyc6a3z0j9jb27dq5djsbpi7ali38il738"; depends=[colorspace scatterplot3d]; }; - PolynomF = derive2 { name="PolynomF"; version="2.0-2"; sha256="06gkyhacc609s7si604rh4yyqdafc4mqy15wcz90qrwbrhr18gcm"; depends=[Rcpp]; }; + Polychrome = derive2 { name="Polychrome"; version="1.2.4"; sha256="1xdw9j95ril76ad6xsnrpm9q988nja4j3xl05b1lf76mghxs0606"; depends=[colorspace scatterplot3d]; }; + PolynomF = derive2 { name="PolynomF"; version="2.0-3"; sha256="067l71i2zjv6gvd0br2m034ls3r5lcmc0amml1qbj4wchd7mqlw9"; depends=[Rcpp]; }; Pomic = derive2 { name="Pomic"; version="1.0.4"; sha256="0xy5fgimbgqqac3n7akhwyvnrvd9fpvx9h8nk4spxrxc8x0km1w7"; depends=[]; }; PooledMeanGroup = derive2 { name="PooledMeanGroup"; version="1.0"; sha256="0i9s7qskjnji3mf6clsi69rnni57v8cysgr9gh3hvxjzlf1sq8y7"; depends=[]; }; PopED = derive2 { name="PopED"; version="0.4.0"; sha256="1cj6nj5w4ckvnldpc7g4mxdps619zlhzsdibd9ih8i2lxh1xbrfz"; depends=[boot codetools dplyr ggplot2 magrittr MASS mvtnorm purrr stringr tibble tidyr]; }; PopGenKit = derive2 { name="PopGenKit"; version="1.0"; sha256="0l4mbm0cyppgvcw2cbimrv29aiciyj00k8wfwcj5zr8sh7fgfhs4"; depends=[]; }; PopGenReport = derive2 { name="PopGenReport"; version="3.0.4"; sha256="0x9j9f9k65rfr4fxyrxqa9220psfh1bicls6vwbxmqsfdsfnvs0j"; depends=[ade4 adegenet calibrate data_table dismo gap gdistance genetics GGally ggplot2 knitr lattice mmod pegas plyr R_utils raster reshape rgdal RgoogleMaps sp vegan xtable]; }; + PopGenome = derive2 { name="PopGenome"; version="2.7.5"; sha256="0xdwgih1n7bkykbzrnp293yzrlj80vr2v6rlsww61nxlhynbh9yn"; depends=[ff]; }; PopVar = derive2 { name="PopVar"; version="1.2.1"; sha256="09az5wa0zai6axhvrljqdjn74nb7jikqwjqy8f570qxb6jbgfgay"; depends=[BGLR qtl rrBLUP]; }; PortRisk = derive2 { name="PortRisk"; version="1.1.0"; sha256="05yxqcv0cijy3s9zx68f9xy59jv55kmj3v0pz5pgl17j23kb9rlc"; depends=[copula MASS MCMCpack tseries zoo]; }; PortfolioAnalytics = derive2 { name="PortfolioAnalytics"; version="1.1.0"; sha256="1jy89brrdw8ilbi9pjxxq5yhqw85ik4kzdd2sa60crjlhvipx0ff"; depends=[foreach PerformanceAnalytics xts zoo]; }; @@ -3154,17 +3163,16 @@ in with self; { PowerNormal = derive2 { name="PowerNormal"; version="1.2.0"; sha256="1kryqcjvgwk0l4z3gqxdiz47mha3jw5583jlb9z7ml6v7cam06sm"; depends=[]; }; PowerTOST = derive2 { name="PowerTOST"; version="1.4-9"; sha256="08qac2482v2b5s7nfhdn9x5gbl348yfwnzgqprh38qp16zzcylhg"; depends=[cubature mvtnorm TeachingDemos tufte]; }; PowerUpR = derive2 { name="PowerUpR"; version="1.0.4"; sha256="0ng88x1zs4kb8cf2v51kynbp32iz41mh40my5sciyvjbw430bk59"; depends=[]; }; - PowerfulMaxEigenpair = derive2 { name="PowerfulMaxEigenpair"; version="0.1.1"; sha256="1hzp3dpcac5han2ij4w0fwk093lr3pgydb39p848jj7jma5hawxs"; depends=[formatR]; }; PracTools = derive2 { name="PracTools"; version="1.2.1"; sha256="1viwmwis9awr7maprnaj0vdzc5rf6md7xlc9l7hnn51xmaa734ih"; depends=[]; }; PreKnitPostHTMLRender = derive2 { name="PreKnitPostHTMLRender"; version="0.1.0"; sha256="1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1"; depends=[knitr rmarkdown XML]; }; PreProcess = derive2 { name="PreProcess"; version="3.1.7"; sha256="1fxzkmrj76mc94xdj7a0nq450021i1jxkigmh5jhrmamkp5581jf"; depends=[oompaBase]; }; PreciseSums = derive2 { name="PreciseSums"; version="0.3"; sha256="02w0pa9dd196sg6zg9w2fp4b0k6wibbw9rbvasr3aphh98kbd6ch"; depends=[]; }; PredPsych = derive2 { name="PredPsych"; version="0.4"; sha256="00h4p1szqzh4a2kjvlriyinh330cfwxsrvs6fi089mr207q890vj"; depends=[caret e1071 ggplot2 MASS mclust party plyr randomForest rpart statmod]; }; - PredictABEL = derive2 { name="PredictABEL"; version="1.2-2"; sha256="08c7j2in1wlas6nmy44s08cq86h5fizqbhsnq312dllqdzmb2h9s"; depends=[epitools Hmisc PBSmodelling ROCR]; }; - PredictionR = derive2 { name="PredictionR"; version="1.0-11"; sha256="1dljdbya93dirx715yqs4vz7hbbcwpgrsvyfgikkm2fj28nnn6k9"; depends=[fitdistrplus]; }; + PredictABEL = derive2 { name="PredictABEL"; version="1.2-4"; sha256="144xmfsp62ssmg501f4y173jrqyv8vps36j4yrwg6ghcmyc01wf8"; depends=[Hmisc lazyeval PBSmodelling ROCR]; }; + PredictionR = derive2 { name="PredictionR"; version="1.0-12"; sha256="0kgc8rjdqskasdaxsbir9gwvm55rw5cpdg3y9nsj7ccg9fc1ji19"; depends=[fitdistrplus Renext]; }; PredictiveRegression = derive2 { name="PredictiveRegression"; version="0.1-4"; sha256="15vkisj3q4hinc3d537s8inhj3wk62q67qhy050xmp9j563ainmd"; depends=[]; }; PresenceAbsence = derive2 { name="PresenceAbsence"; version="1.1.9"; sha256="17qn4ggkr5aqml45nkihj1j35y479ywkm1xcfkb2g8ky66jb0c0s"; depends=[]; }; - PrevMap = derive2 { name="PrevMap"; version="1.5.2"; sha256="0nr65vfdzny3y3mly7slm903h4llnn3rxbxz3ml07pnighf7rr3q"; depends=[geoR lme4 Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; + PrevMap = derive2 { name="PrevMap"; version="1.5.3"; sha256="0pgrfrfw587vsci98lxd205r8wl7x7c9ns15ypnhwr8xaysdxnpf"; depends=[lme4 Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; PriorCD = derive2 { name="PriorCD"; version="0.1.0"; sha256="1mb50w2i8sfxjzqd5xnfysn3jnzkkyv6l8algxnp0xpyhcq41pfs"; depends=[dplyr igraph ROCR visNetwork]; }; PriorGen = derive2 { name="PriorGen"; version="1.1.2"; sha256="0qvdqqdy7wdwwcq95mkgfyf7xf6xlpwdfs3gq299yyv2ba57flnm"; depends=[rootSolve]; }; PrivateLR = derive2 { name="PrivateLR"; version="1.2-22"; sha256="0d142fa3wk7yadvs8jszajs6hq9m03p0j6h5r4pbw7j0d1l72hgc"; depends=[]; }; @@ -3172,7 +3180,8 @@ in with self; { ProFit = derive2 { name="ProFit"; version="1.3.3"; sha256="0jrw0v7dg5mf4zxg7pqybh9qzsiqb3nnz8g5qlc4iz73mhr9gm2b"; depends=[celestial checkmate cubature FITSio LaplacesDemon magicaxis RColorBrewer]; }; ProFound = derive2 { name="ProFound"; version="1.3.4"; sha256="1kn9kj0vq18jxiavdzx4l4kgyfwjnflfbyqfdihrdfrkz4xz4w3c"; depends=[celestial data_table doParallel FITSio foreach magicaxis RColorBrewer Rcpp]; }; ProPublicaR = derive2 { name="ProPublicaR"; version="0.9.2"; sha256="17fghv7w4wm4q9nd6l4pl5ibk5i4zgdhlp5pvbzvymhvby0q06sw"; depends=[config dplyr httr lubridate stringr]; }; - ProTrackR = derive2 { name="ProTrackR"; version="0.3.6"; sha256="1lhk3lrspiqcw2ckss52gdjk1f6ph8m7dlb05qxcx8mycq0xd3z9"; depends=[audio lattice signal tuneR XML]; }; + ProTrackR = derive2 { name="ProTrackR"; version="0.3.7"; sha256="15m8g9v254avi68qr7v5q4fzhclkv1q849sj69fs0c9qcli1x384"; depends=[audio lattice signal tuneR XML]; }; + ProbBayes = derive2 { name="ProbBayes"; version="1.1"; sha256="0bkbqyrmpy9swaxsl91w6iiw81znjf1lk4b0vqgn6wdnrir6gkmn"; depends=[ggplot2 gridExtra LearnBayes shiny]; }; ProbForecastGOP = derive2 { name="ProbForecastGOP"; version="1.3.2"; sha256="0fnw3g19lx4vs8vmn4qdirvybkiy2cxkhwkn9qa3phz45iixnvx4"; depends=[fields RandomFields]; }; ProbYX = derive2 { name="ProbYX"; version="1.1-0"; sha256="0dphf6jr72l235v3yjhwi8bqmv6ac7yrbyfwhx4qjrrcdnsb7qhl"; depends=[rootSolve]; }; ProbeDeveloper = derive2 { name="ProbeDeveloper"; version="1.0.0"; sha256="1d2zr8ikia3mspp2arpx7iwf4a4pq1ywl82pxbxrw6xpz313d5x9"; depends=[Biostrings TmCalculator]; }; @@ -3183,7 +3192,7 @@ in with self; { ProgGUIinR = derive2 { name="ProgGUIinR"; version="0.0-4"; sha256="0srhk42ssx4i096sbs4jacqjsc1ffqjxjgvpplzshlqaby1h3795"; depends=[ggplot2 MASS svMisc]; }; ProjectManagement = derive2 { name="ProjectManagement"; version="1.2.4"; sha256="1lv1yf6xslskjqz7mgi8brvpix9g7k0yy6q03gckz1rmcakzqj5p"; depends=[GameTheory kappalab lpSolveAPI plotly triangle]; }; ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.9.0"; sha256="07nj339k822xnjqcraivl85wcvnq3cp8gz051kq5zmfx19p1wvdv"; depends=[]; }; - ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.0.7"; sha256="1nammbm9hjsgb46cqvhwx45lfaaxw13d12q43fgwk411a91rblm1"; depends=[deldir GeneralizedUmatrix geometry ggplot2 Rcpp shiny shinyjs vegan]; }; + ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.1.0"; sha256="109ak43h2irk4mkybg6k8mqgjdkj1ywbqbd2zy9qrzvy1gay4zp5"; depends=[deldir GeneralizedUmatrix geometry ggplot2 magrittr plotly Rcpp shiny shinyBS shinyjs shinythemes vegan]; }; ProliferativeIndex = derive2 { name="ProliferativeIndex"; version="1.0.1"; sha256="03ipsbs8pfwr8wsx7j2y9c67ic4qcady7xpa47l8dr14ff63cfk7"; depends=[]; }; PropCIs = derive2 { name="PropCIs"; version="0.3-0"; sha256="1ywzi88igzaj2wnbrqa08cy7pw886z2m0x3j7rk45rin9mgpfdfd"; depends=[]; }; PropClust = derive2 { name="PropClust"; version="1.4-6"; sha256="1p15n98b6qprphgbhdqgnsxy9d9kik19h6j9f2dy6x1hkinrzsfa"; depends=[dynamicTreeCut fastcluster]; }; @@ -3198,14 +3207,15 @@ in with self; { PubMedWordcloud = derive2 { name="PubMedWordcloud"; version="0.3.6"; sha256="1wfp1fpr4an7psrwidx38brvhvghmvfsgjy4gdx81p1bdsdn2kw2"; depends=[RColorBrewer RCurl stringr tm wordcloud XML]; }; PublicationBias = derive2 { name="PublicationBias"; version="1.1.0"; sha256="0prdwv3w9n0ppwizfqqvy5qj7krn3nm2zncz17zh7ijdw87xks4i"; depends=[dplyr ggplot2 metafor MetaUtility Rdpack robumeta]; }; Publish = derive2 { name="Publish"; version="2019.12.04"; sha256="0vcfz6hx2bkwrksz6b0rx0w6j24h3qswgca06jhgq3jzvsmjjckx"; depends=[data_table lava multcomp prodlim survival]; }; - PupilPre = derive2 { name="PupilPre"; version="0.6.1"; sha256="02ffcr4ccwx7m81hla0n1vgbhb79y2vvyv1k5928j7kz5p1lv782"; depends=[dplyr ggplot2 mgcv rlang robustbase shiny signal tidyr VWPre zoo]; }; + PupilPre = derive2 { name="PupilPre"; version="0.6.2"; sha256="123m1zqld0jl26vqz41iic7vxzyfs1aw8zi5ki2cy6wzw9ss87m6"; depends=[dplyr ggplot2 mgcv rlang robustbase shiny signal tidyr VWPre zoo]; }; + PupillometryR = derive2 { name="PupillometryR"; version="0.0.1"; sha256="0fn1cm43jzkdph06awg741x31v5674vxb8zgnz3pfh585jggkb3j"; depends=[data_table dplyr fda fractal ggplot2 lazyeval mgcv rlang signal tidyr zoo]; }; PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; }; Pursuit = derive2 { name="Pursuit"; version="1.0.0"; sha256="0wcg9zcln2mpqdyi4k4fcah6s1n0xd0jvc98vl4p1gyygy1x2vdr"; depends=[MASS]; }; PxWebApiData = derive2 { name="PxWebApiData"; version="0.3.0"; sha256="1c2liqh1asd0mk4cvrwpl4pdid2rqfxrma284ah4hwr6sah5lk6w"; depends=[httr jsonlite pxweb rjstat]; }; - PythonInR = derive2 { name="PythonInR"; version="0.1-7"; sha256="1vrvf68sl2k25y3ppjwpi2j4952aq4k76r92qnq3fj92789ndyqv"; depends=[pack R6]; }; + PythonInR = derive2 { name="PythonInR"; version="0.1-9"; sha256="1kifcnax1685rd9w6m713marik0na8xn572zymvcvdwp2yd1vjn5"; depends=[pack R6]; }; QAIG = derive2 { name="QAIG"; version="0.1.5"; sha256="1cchf5x7wzc3mc6xzvq14kmd9yxr9kq237s8af4xqaz1pv0b093j"; depends=[Formula stringr]; }; QBAsyDist = derive2 { name="QBAsyDist"; version="0.1.2"; sha256="1yql29npaq9yz02bv3hqf5m2mhscjms7qqf4vlaxm8s665rxcxad"; depends=[ald Deriv GoFKernel locpol nloptr quantreg scdensity zipfR]; }; - QCA = derive2 { name="QCA"; version="3.6"; sha256="07n2652l56w5dyz1ph4q7n9xkf0i145dya2w05b7lbilfjzqqxd1"; depends=[admisc shiny venn]; }; + QCA = derive2 { name="QCA"; version="3.7"; sha256="0m78ky2w988d46jk5idhg2vyn8sw5sdvl0gv479snjxidjb78mml"; depends=[admisc lpSolve shiny venn]; }; QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; }; QCApro = derive2 { name="QCApro"; version="1.1-2"; sha256="1glfb1x1h05cs07nq5glqvlil58wp3c0kaxi1l7k94y797i8r7hq"; depends=[lpSolve]; }; QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; }; @@ -3219,16 +3229,16 @@ in with self; { QGglmm = derive2 { name="QGglmm"; version="0.7.4"; sha256="0ghvicz4ia1180byj28lmg49889hqhb94g1jrkhm6hnzgqbjnfmd"; depends=[cubature]; }; QHOT = derive2 { name="QHOT"; version="0.1.0"; sha256="02z0n2jawd6m7bvyvpcy0j13p1c0zm036g62n56xva18qnq5c9lb"; depends=[]; }; QLearning = derive2 { name="QLearning"; version="0.1.1"; sha256="1bx77yxsnzh0ny3ghala5fw54lxzrxqk9s32qk3dzvfbyp4paggn"; depends=[]; }; - QPBoot = derive2 { name="QPBoot"; version="0.2"; sha256="1nxmxayfq2xcjzix080mkc8y52wl3vs0rcwdl8lmhwfawjb4pap5"; depends=[abind quantspec rugarch]; }; QQperm = derive2 { name="QQperm"; version="1.0.1"; sha256="06xhv54zgnx8i22j23a0dqxhh7my416idpkkwq93qd1rdzgamzc8"; depends=[]; }; QRAGadget = derive2 { name="QRAGadget"; version="0.1.0"; sha256="0vmhbpfbbpbcs6s9zjam893yl54spbx4x4698c504g96hcc19kkp"; depends=[htmlwidgets leaflet magrittr miniUI raster scales shiny sp]; }; QRISK3 = derive2 { name="QRISK3"; version="0.3.0"; sha256="0aqqncmlhb5iks8081y34ydlls3g31j994fqqzsbsc3ckcks87qj"; depends=[]; }; + QRM = derive2 { name="QRM"; version="0.4-31"; sha256="15dyk3zfy92vj4xny04dh5mqcyb8qh61566m313qs17mxwibvn2a"; depends=[gsl Matrix mgcv mvtnorm numDeriv Rcpp timeDate timeSeries]; }; QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; }; QRegVCM = derive2 { name="QRegVCM"; version="1.2"; sha256="0fcydkf6r2qxd59ylr8vn76bkxks91v58gfzvq3rjd5mqf9vsaaq"; depends=[quantreg SparseM truncSP]; }; QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; }; QTL_gCIMapping = derive2 { name="QTL.gCIMapping"; version="3.2"; sha256="0a4ki5scmc771sr79maian7y790bw71l67d1qpc09qprmf9i36jl"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl Rcpp stringr]; }; QTL_gCIMapping_GUI = derive2 { name="QTL.gCIMapping.GUI"; version="2.0"; sha256="0jj6w8z99vpzgh76lv53zj8nv9p57y3502prr6xwkshj6rp8q1zv"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl QTL_gCIMapping Rcpp shiny stringr]; }; - QTLRel = derive2 { name="QTLRel"; version="1.4"; sha256="1ni8hf7xiadfg4p05wa83x7wg26d030mfjm45phghg0i1n7lfc4b"; depends=[gdata lattice]; }; + QTLRel = derive2 { name="QTLRel"; version="1.6"; sha256="1198qrrl7samm4jzliy5i8wfvladz6wpm48l1g2x6ackm1asiw75"; depends=[gdata lattice]; }; QTOCen = derive2 { name="QTOCen"; version="0.1.1"; sha256="0wlbxk1rd56k02jf3pfzbx6xx5mmf6sb7gvds0067cvb7m42ghcr"; depends=[MatrixModels quantreg Rdpack rgenoud survival]; }; QUALYPSO = derive2 { name="QUALYPSO"; version="1.1"; sha256="0qpjv6krz66qfgyzndxihy5shmlsb0zs3wh49sxp00fh2bci5msw"; depends=[doParallel expm foreach MASS Rfast]; }; QUIC = derive2 { name="QUIC"; version="1.1"; sha256="021bp9xbaih60qmss015ycblbv6d1dvb1z89y93zpqqnc2qhpv3c"; depends=[]; }; @@ -3246,8 +3256,8 @@ in with self; { QuantileGradeR = derive2 { name="QuantileGradeR"; version="0.1.1"; sha256="1zwc6bg636gk8zll7wpznd3pzl611hcj2fmzp8b9505rra13p0g2"; depends=[]; }; QuantileNPCI = derive2 { name="QuantileNPCI"; version="0.9.0"; sha256="043lkg1pyaja7a4f9lmcwrvdjpfly2z378s15snwnxj8vb5pgr38"; depends=[]; }; QuantumClone = derive2 { name="QuantumClone"; version="1.0.0.6"; sha256="1520jgkzp8g7gv7ggqhvlrdnpdyhygqjgsd1my5jq30afdqj6qmp"; depends=[DEoptim doParallel foreach fpc ggplot2 gridExtra NbClust optimx]; }; - QuantumOps = derive2 { name="QuantumOps"; version="3.0.0"; sha256="0kysrfxwnxwll8i2hv0nci8kzmx799vchchkpylqs9ia7j8yn9i6"; depends=[]; }; - Quartet = derive2 { name="Quartet"; version="1.0.3"; sha256="0rgcgnk636jzqdylax0g40kdpvxpbksds73df6j4jxin7dc6b2nk"; depends=[ape memoise Rcpp Rdpack Ternary TreeSearch]; }; + QuantumOps = derive2 { name="QuantumOps"; version="3.0.1"; sha256="0gl1myf7q444imyvsjvxiaxaahf0n0bsggwbd0z3az73l6yf1gjh"; depends=[]; }; + Quartet = derive2 { name="Quartet"; version="1.1.0"; sha256="0sndc86dbd57hv75qm7g8611jayqfx4y6qp215bxgyskhscxv09v"; depends=[ape memoise Rcpp Rdpack Ternary TreeTools]; }; QuasiSeq = derive2 { name="QuasiSeq"; version="1.0-10-2"; sha256="1mr43vys9l1n859lzlcakjrvjllybgrwl0p8mc28h7m87yjkj670"; depends=[edgeR mgcv pracma]; }; R_SamBada = derive2 { name="R.SamBada"; version="0.1.2"; sha256="123a7s3rcmraq4chiqjkdp969jmr4c5br2xamdgvj6gzaf8zpmg0"; depends=[gdsfmt SNPRelate]; }; R_cache = derive2 { name="R.cache"; version="0.14.0"; sha256="1n8n5ihkryrbxv630dwhz4r048nyv676qd3i9f5z5fa04hvlxbqq"; depends=[digest R_methodsS3 R_oo R_utils]; }; @@ -3255,32 +3265,31 @@ in with self; { R_filesets = derive2 { name="R.filesets"; version="2.13.0"; sha256="124rygq0bl9n4akxcm868nl30cyk3rz0iprb98zlpk62gci9f5fg"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; R_huge = derive2 { name="R.huge"; version="0.9.0"; sha256="13p558qalv60pgr24nsm6mi92ryj65rsbqa6pgdwy0snjqx12bgi"; depends=[R_methodsS3 R_oo R_utils]; }; R_matlab = derive2 { name="R.matlab"; version="3.6.2"; sha256="1fw6ny8xb2j088k3s9lzd15av3j6xc2bvbccyrp7yjx2f3s3i8qv"; depends=[R_methodsS3 R_oo R_utils]; }; - R_methodsS3 = derive2 { name="R.methodsS3"; version="1.7.1"; sha256="11z6v2i7jl647wxi9p5z66yvfnnqv6s7fxqmz7w2gkb6j8wl1f24"; depends=[]; }; + R_methodsS3 = derive2 { name="R.methodsS3"; version="1.8.0"; sha256="19c5870v7b59fs6xk58bh3rfkmhfralmgsax86zzpdmz47pga1g0"; depends=[]; }; R_oo = derive2 { name="R.oo"; version="1.23.0"; sha256="189fb7mmyzwg6nn8rza8iip7fbyws7i2vkmzy672x9mhvgilq4pm"; depends=[R_methodsS3]; }; R_rsp = derive2 { name="R.rsp"; version="0.43.2"; sha256="128zqyvbq9hm9gy86jzhj609lkfw57vr24mdxgh46ncmx66ag4gj"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; R_temis = derive2 { name="R.temis"; version="0.1.2"; sha256="1bar4vyjnc9plwqm66vbgf6rakgj095zb7wsypmf3j3az694y62q"; depends=[crayon explor FactoMineR igraph NLP slam SnowballC stringi testthat tm tm_plugin_alceste tm_plugin_europresse tm_plugin_factiva tm_plugin_lexisnexis wordcloud]; }; R_utils = derive2 { name="R.utils"; version="2.9.2"; sha256="1krj1ny7y43lpm2q8c7swxfdc3ngy2j8knzv71f8bfsgh673nsxc"; depends=[R_methodsS3 R_oo]; }; R0 = derive2 { name="R0"; version="1.2-6"; sha256="1yvcgchxlj7hkgqkw6g8pxnracxkld1grgykkcr6wbhminbylqv8"; depends=[MASS]; }; R1magic = derive2 { name="R1magic"; version="0.3.2"; sha256="1xfldr5y7pfdi6qljjvckknsv2wi9rnzwmqxkpgnyc96md2fvwjr"; depends=[]; }; + R2019nCoV = derive2 { name="R2019nCoV"; version="0.1.0"; sha256="1959mwacn0zzq0g5ili2v6aqs51rb6qvlsv16xx7qwml8xahf215"; depends=[dplyr ggplot2 jsonlite maps pinyin]; }; R2BEAT = derive2 { name="R2BEAT"; version="1.0.1"; sha256="0x0gb3gpvjmwa6f2p0p45m86l9iy7nwmcjhyi68lg694cvd9ny37"; depends=[]; }; R2BayesX = derive2 { name="R2BayesX"; version="1.1-1"; sha256="1ff8cscl839ykp7l34sscc8zqp516mh64igk7dfv9n02l40w8ypf"; depends=[BayesXsrc colorspace mgcv]; }; R2DGC = derive2 { name="R2DGC"; version="1.0.3"; sha256="0f84fmpf3m2s2p6bllvjs8rgnhwjy54adblv02dq8gakwvb4j2aw"; depends=[]; }; R2DT = derive2 { name="R2DT"; version="0.1"; sha256="0zydrdx6xdlacq6s01jwv4rv6ydmbwmiif40rilp8h76bim0kdbr"; depends=[data_table devFunc plyr]; }; - R2GUESS = derive2 { name="R2GUESS"; version="2.0"; sha256="16spx5wq755ar5fvkncikaabrw75hbgnxi7j32vjg8qk4knjiwj9"; depends=[fields MCMCpack mixOmics mvtnorm snowfall]; }; R2HTML = derive2 { name="R2HTML"; version="2.3.2"; sha256="00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9"; depends=[]; }; R2MLwiN = derive2 { name="R2MLwiN"; version="0.8-6"; sha256="1qhhigb9yryciq3j28q7wcvyw49nvf2mb8m9nj1c14z0pchi7xir"; depends=[coda digest doParallel foreach foreign lattice Matrix memisc R2WinBUGS texreg]; }; R2OpenBUGS = derive2 { name="R2OpenBUGS"; version="3.2-3.2"; sha256="1cxr93g0fkdv3lqdh63l2gcp7qn3q42pm1r6nzf35550k9ahkhnv"; depends=[boot coda]; }; R2SWF = derive2 { name="R2SWF"; version="0.9-2"; sha256="1f7bj2jqm7ys3rimgpsn252j39mw0xd008p3zqi77x1flisla0z3"; depends=[sysfonts]; }; R2WinBUGS = derive2 { name="R2WinBUGS"; version="2.1-21"; sha256="0k8k214x712vjj2k1am4zzf6scccs3b98ysiz4lwxpzm818wp1ps"; depends=[boot coda]; }; - R2admb = derive2 { name="R2admb"; version="0.7.16"; sha256="0s8p82avxdp5zmkz7amvnphn3lcyhha31mbjghibnhm9g16k0b84"; depends=[coda lattice]; }; + R2admb = derive2 { name="R2admb"; version="0.7.16.2"; sha256="1gwp850ff76lqqn6amj75rjqb1szk6x2vlhqgwng4z45i56bmdf7"; depends=[coda lattice]; }; R2jags = derive2 { name="R2jags"; version="0.5-7"; sha256="0h1d27cddyacx5m5f23rlki97iwni7clffmb2k7a4bznlnjhn50a"; depends=[abind coda R2WinBUGS rjags]; }; R2ucare = derive2 { name="R2ucare"; version="1.0.0"; sha256="1nh2wf3syxjz9flxhf8x9fd2c2ndn4dha4k34lz1nq5j4qz7wfp1"; depends=[RMark stringr]; }; R330 = derive2 { name="R330"; version="1.0"; sha256="01sprsg7kph62abhymm8zfqr9bd6dhihrfxzgr4pzi5wj3h80bjm"; depends=[lattice leaps rgl s20x]; }; - R3port = derive2 { name="R3port"; version="0.1.1"; sha256="0ww0sqjx0la03qx353h0y5wr5qpc5fir3gjy4fsxkw6jrsyx9vaz"; depends=[plyr reshape2 whisker]; }; + R3port = derive2 { name="R3port"; version="0.2.3"; sha256="0m0nkmr0hj4dhb762vnin3iqhp6j4a73aslgz59wwlqi7v421vaj"; depends=[plyr reshape2 tinytex whisker]; }; R4CouchDB = derive2 { name="R4CouchDB"; version="0.7.5"; sha256="1wd1yqbs8m4zqvdm6x7mrcyk5b5pr4azm3r49nrilg8fnr2bk9rz"; depends=[bitops RCurl RJSONIO]; }; - R4dfp = derive2 { name="R4dfp"; version="0.2-4"; sha256="02crzjphlq4hi2crh9lh8l0acmc1rgb3wr1x8sn56cwhq4xzqzcb"; depends=[]; }; R6 = derive2 { name="R6"; version="2.4.1"; sha256="0gma5z41mx02ka9h96xdyf3p6i1rx0izczrzj26c4mbnh9jgvc16"; depends=[]; }; - R62S3 = derive2 { name="R62S3"; version="1.3.1"; sha256="168iyz9zhnvbfgqnshbk9cvmzalmn1m9gxspdwr5xqa1x17hw6az"; depends=[checkmate]; }; + R62S3 = derive2 { name="R62S3"; version="1.4.1"; sha256="0g01izg77spn79xqwva2gzrvk66i20xlb789wl5rgcz7pz7gpjd2"; depends=[data_table]; }; R6DS = derive2 { name="R6DS"; version="1.2.0"; sha256="0ai1yqfhn634vm88waxdb6j24vwcna29gdqzdrwm0nxwf7l6g0m3"; depends=[R6]; }; RAC = derive2 { name="RAC"; version="1.5"; sha256="0q0kk9j3blrnhv0rfmryc35lli5j4kds2vmjdpg77znagb45609k"; depends=[maps maptools matrixStats ncdf4 plotrix raster rgdal rgeos rstudioapi sp]; }; RAD = derive2 { name="RAD"; version="0.3"; sha256="0nmgsaykxavq2bskq5x0jvsxzsf4w2gqc0z80a59376li4vs9lpj"; depends=[MASS mvtnorm]; }; @@ -3294,22 +3303,21 @@ in with self; { RANN = derive2 { name="RANN"; version="2.6.1"; sha256="10kid40w9w7vkz2hpcfkdpxr4afxzms5dzvfwr0sl5xynzgw76dj"; depends=[]; }; RAP = derive2 { name="RAP"; version="1.1"; sha256="18dclijs72p6gxawpg8hk7n512ah4by5jfg2jnrp8mz79ajmdgir"; depends=[]; }; RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; }; - RAPTOR = derive2 { name="RAPTOR"; version="1.0.0"; sha256="1i3p3qa56ghcwh69vv3gnxnw13cbd99ms654j2bqr7g9qb7nl8vj"; depends=[mgcv]; }; + RAPTOR = derive2 { name="RAPTOR"; version="1.0.1"; sha256="1bj3xsl83mb8zwap8icywrfdld382fram79b0n14jbk1l87rj9r4"; depends=[mgcv]; }; RATest = derive2 { name="RATest"; version="0.1.7"; sha256="0xam006fp8qapq2lggpa0bq33qi1ziads6kfsqprdgvcfk64qzsn"; depends=[ggplot2 gridExtra quantreg]; }; RAdwords = derive2 { name="RAdwords"; version="0.1.18"; sha256="1c3m2j2cf1s51p783rdng5ns913bv7rbjc1vpmrmsxg2kf5f6qyq"; depends=[RCurl rjson]; }; RAhrefs = derive2 { name="RAhrefs"; version="0.1.4"; sha256="0yd7jbv2x711dnhbvwjjg7qhg8h8bh5564amsv9bkqw661i042m3"; depends=[assertthat httr jsonlite testthat]; }; RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.4"; sha256="0z08xwdn3vzwmprx5yh2xip5bqk13zrd47lwnsa2yin2phz6yry1"; depends=[]; }; RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; }; - RAppArmor = derive2 { name="RAppArmor"; version="3.2"; sha256="0apw4l7z0jwa7bs7scfysv2amk2rxi7knw9x9j7vqlrgj0i059gm"; depends=[unix]; }; - RArcInfo = derive2 { name="RArcInfo"; version="0.4-12"; sha256="1j1c27g2gmnxwslff4l0zivi48qxvpshmi7s9wd21cf5id0y4za4"; depends=[RColorBrewer]; }; - RAthena = derive2 { name="RAthena"; version="1.7.0"; sha256="0l3pdachqiq42bf715a70849gyi0qvf62mg4m9zfnlaifck14fz8"; depends=[data_table DBI reticulate]; }; + RAppArmor = derive2 { name="RAppArmor"; version="3.2.1"; sha256="0n75clpha3452jqk4idb6kffc4zw3vim60k5wh7ajcpwab10j94s"; depends=[unix]; }; + RAthena = derive2 { name="RAthena"; version="1.8.0"; sha256="0i428qcw3myaiy9zyc2wzwaj2d4sv8lg7w8nqppkb00nslv00il8"; depends=[data_table DBI reticulate]; }; RBF = derive2 { name="RBF"; version="1.0.0"; sha256="0q2k2ar9cd62cykg99r86cflx2nknlg32fhhsjay4xs191fapw8j"; depends=[]; }; RBMRB = derive2 { name="RBMRB"; version="2.1.2"; sha256="1m6n2kfg83mlfy22k75hy5zjf547v0rdwk9w6l04yfyrr6himbr8"; depends=[data_table ggplot2 httr plotly rjson]; }; RBPcurve = derive2 { name="RBPcurve"; version="1.2"; sha256="0zkfvnhm780vid4qqdrx9mnc6jxxrmrnq47pqvk35rm3m4l96782"; depends=[BBmisc checkmate mlr shape TeachingDemos]; }; - RBaseX = derive2 { name="RBaseX"; version="0.1.4"; sha256="0wid1vvbj3vlj1l6z5gd7kkjmskmrggj3dmqba4y7nwyvfr0d0hg"; depends=[dplyr magrittr openssl R6 RCurl stringr]; }; + RBaseX = derive2 { name="RBaseX"; version="0.2.4"; sha256="0y3mza485jj7aj3x4hnspkkgsg8y3zmgvhd3zb9p01iafa3ck91p"; depends=[dplyr magrittr openssl R6 RCurl stringr tibble]; }; RBesT = derive2 { name="RBesT"; version="1.5-4"; sha256="1050lhwa7ph5xlzchx0lz7fx6bnfl5zhrim9cy2lh4fxw0vdm7xp"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 mvtnorm Rcpp RcppEigen rstan StanHeaders]; }; RBitmoji = derive2 { name="RBitmoji"; version="0.0.2"; sha256="1v9qj3vmqsvnccsy735nbflmd81183h2flm0f1ckd4kl08r2fr3f"; depends=[getPass httr jsonlite png RCurl]; }; - RBtest = derive2 { name="RBtest"; version="1.0"; sha256="1pyygx39r5dd81xqzqmxhkwapaq7pc5q1bp0gwx28cp4wi07mm6i"; depends=[mice nnet psych]; }; + RBtest = derive2 { name="RBtest"; version="1.1"; sha256="09da721zfj6cw4i9gifn5f0sv3nj0qfjb96c5w9g9gzx55ihssnk"; depends=[mice nnet psych]; }; RCA = derive2 { name="RCA"; version="2.0"; sha256="0pidb5czrf0dc3ywy6cwm5akgsc62pvf94kfyxibzmd1favykx1h"; depends=[gplots igraph]; }; RCAL = derive2 { name="RCAL"; version="1.0"; sha256="1hpn69891h9cildwr6wsssa3fnnzyw0xw9vfgf4qdg0m9x6il6qb"; depends=[trust]; }; RCALI = derive2 { name="RCALI"; version="0.3.1"; sha256="0hc7h55qi8bpmp9rfh1wgxqs28kbs4yqxch2jlgl42vk5383askq"; depends=[splancs]; }; @@ -3317,11 +3325,12 @@ in with self; { RCMIP5 = derive2 { name="RCMIP5"; version="1.2.0"; sha256="0bwp1ln0y48g2d0bj9b47y0rlwffzv0pi6gjfzv4sg5anhswc9x7"; depends=[abind assertthat digest dplyr Matrix]; }; RCPmod = derive2 { name="RCPmod"; version="2.190"; sha256="1r24g8fcizyqzgp0da90sxpwalgcsgz2b168j2smpylxraiqb037"; depends=[fishMod glmnet gtools MASS]; }; RCRnorm = derive2 { name="RCRnorm"; version="0.0.2"; sha256="1mz1jb7mc9c47hbk9flnddny4zir6r2k5qis30iynwqny521l6ln"; depends=[truncnorm]; }; - RCSF = derive2 { name="RCSF"; version="1.0.1"; sha256="0mqrv0bk17mm8ywicmns90n8g9h161hw1l77ji7hvadiv0y7vznq"; depends=[Rcpp]; }; + RCSF = derive2 { name="RCSF"; version="1.0.2"; sha256="1hjl7qsdgcddn3nh2likndhfhnw9gj3453xqq96gddgb1y0m3bh1"; depends=[Rcpp]; }; RCarb = derive2 { name="RCarb"; version="0.1.3"; sha256="0z5hpnlzlvbh14f1wjy9rw4ljdsiqdzmqnmh3yqz7mbw5qxx4gzz"; depends=[interp matrixStats]; }; RCassandra = derive2 { name="RCassandra"; version="0.1-3"; sha256="0xa241s81cyw6lfjb522f2mlyrd0gav9yz3z5jab9hpdpgg9ri38"; depends=[]; }; RChronoModel = derive2 { name="RChronoModel"; version="0.4"; sha256="0haqxwic160pnnm90bgchzxmsdwmi6m97i9xrh8js8bp2xn76l5f"; depends=[hdrcde]; }; RCircos = derive2 { name="RCircos"; version="1.2.1"; sha256="1zdq3ga2pd0p2gzlm0vr8w3a4rq4hgka3r56kkcym0za0nmqk51v"; depends=[]; }; + RClickhouse = derive2 { name="RClickhouse"; version="0.5.2"; sha256="1ii4d1nh15km1savahpwgvdn3lb2y7sa44izqydckw1xawwgf7xr"; depends=[bit64 DBI dbplyr dplyr Rcpp]; }; RClone = derive2 { name="RClone"; version="1.0.2"; sha256="1kv02acj0mk5102wvmdnxnkb7qig3jb9amcs4k2r26fpa4hyfa7f"; depends=[]; }; RColetum = derive2 { name="RColetum"; version="0.2.1"; sha256="1hgk9p234m3w49sw2j2rg8c14z3gz1mabvb69b1bxrg7f1mz9slg"; depends=[dplyr httr jsonlite]; }; RColorBrewer = derive2 { name="RColorBrewer"; version="1.1-2"; sha256="1pfcl8z1pnsssfaaz9dvdckyfnnc6rcq56dhislbf571hhg7isgk"; depends=[]; }; @@ -3343,7 +3352,7 @@ in with self; { REAT = derive2 { name="REAT"; version="3.0.2"; sha256="0x5cal502n8abynx1jk2ccmmggvd41rvd2gc6rxkbyvcp4794l82"; depends=[]; }; REBayes = derive2 { name="REBayes"; version="2.2"; sha256="1jh5vw9pbcf5gpmx3b5b36fh8rz5y8npx53aai0kxh49kjf8d63c"; depends=[Matrix reliaR]; }; RECA = derive2 { name="RECA"; version="1.7"; sha256="1xikj20flqajpkw4wyynmqd1pafbylzwfrmc8bz9pqgggjjhrqql"; depends=[]; }; - REDCapExporter = derive2 { name="REDCapExporter"; version="0.1.0"; sha256="1sqxx6qd7sg76ybpvhk0xzhmlc73bknn3v2cj3s24dyg783ywaqx"; depends=[lubridate RCurl]; }; + REDCapExporter = derive2 { name="REDCapExporter"; version="0.2.0"; sha256="0h9sz5hd5b0paqybid8xjx7lbirlknazx11phylqixmnl9a8qra3"; depends=[data_table keyring lubridate RCurl]; }; REDCapR = derive2 { name="REDCapR"; version="0.10.2"; sha256="0rdni325k0641yfv4g9l1szg1bl48767n6r1xkh8q3fnvqaqwnrg"; depends=[dplyr httr magrittr readr rlang tibble tidyr]; }; REEMtree = derive2 { name="REEMtree"; version="0.90.3"; sha256="01sp36p12ky8vgsz6aik80w4abs70idr9sn4627lf94r92wwwsbc"; depends=[nlme rpart]; }; REGENT = derive2 { name="REGENT"; version="1.0.6"; sha256="1f2sjqkhw3rbmwbcmx7l7imj696kblisi8y3fz77xygbcbxa6rmq"; depends=[]; }; @@ -3355,15 +3364,14 @@ in with self; { RESS = derive2 { name="RESS"; version="1.3"; sha256="1vddmifp47ia0sk35rnjpvw6gr9ygygafqczq268h17i1qs6ar22"; depends=[]; }; REST = derive2 { name="REST"; version="1.0.1"; sha256="16v89z7p9qkg7bsypf9vkrnbmb2n7gw3fqnfzbyxwj496wzxdv1x"; depends=[Rcmdr]; }; REdaS = derive2 { name="REdaS"; version="0.9.3"; sha256="09mmcvzgsxvrcq7sq3pw81pxgb1493p8lx8p5hhz8i42vshza6pn"; depends=[]; }; - REddyProc = derive2 { name="REddyProc"; version="1.2"; sha256="1jwmxr9xl45n7r3h6h634lw81j07bn26nhjhwww5nnwwyyylcn4b"; depends=[dplyr magrittr mlegp purrr Rcpp rlang solartime tibble]; }; + REddyProc = derive2 { name="REddyProc"; version="1.2.2"; sha256="0b1vyv92wxbvdh1jaqmfb4qb1clpbh50j8h55nq777zc1l9ml4a7"; depends=[dplyr magrittr mlegp purrr Rcpp rlang solartime tibble]; }; REddyProcNCDF = derive2 { name="REddyProcNCDF"; version="1.1.4"; sha256="099f4mzqj7pjlrs8rdjg44mjm0058x3pj2imrfvk892hmlk4r53p"; depends=[REddyProc]; }; + REndo = derive2 { name="REndo"; version="2.3.1"; sha256="0v0p750nbvmr70qhmq4h995xfnp1phmwa990ifgk8y1ka7frwzrx"; depends=[AER corpcor data_table Formula lme4 Matrix mvtnorm optimx]; }; RFGLS = derive2 { name="RFGLS"; version="1.1"; sha256="13ggxj74h5b2hfhjyc50ndxznkvlg18j80m78hkzwh25d3948fsk"; depends=[bdsmatrix Matrix]; }; RFLPtools = derive2 { name="RFLPtools"; version="1.6"; sha256="1hl2crg7jl266zac41xvx151h7kl52346wnlvd8hba64s4s4apay"; depends=[RColorBrewer]; }; RFOC = derive2 { name="RFOC"; version="3.4-6"; sha256="0cs5wmpvrlag9aisbfiwkvwcb3skv5z4sawl30krmsq49mzj7yhd"; depends=[GEOmap MASS RPMG RSEIS splancs]; }; - RFgroove = derive2 { name="RFgroove"; version="1.1"; sha256="1ank7jvmn83w0xzylf7i0fjb60mbrzzydspksfzcy16rkl6f5dvb"; depends=[fda randomForest wmtsa]; }; RFinanceYJ = derive2 { name="RFinanceYJ"; version="0.3.1"; sha256="0qhmzsch7c2p0zckjkspsajzh8m10cf75ixjlgd0nj8rm41fngm3"; depends=[XML xts]; }; RFishBC = derive2 { name="RFishBC"; version="0.2.3"; sha256="1xhjsinb6dfr1zzzyvawc6bb10dnr3nbx86mi6lrzav42sbq31ni"; depends=[cli clisymbols crayon readbitmap rlang settings stringr tidyr withr]; }; - RFmarkerDetector = derive2 { name="RFmarkerDetector"; version="1.0.1"; sha256="1zd0sbcji620pka5600ilj4bq9gzdnk5kf82qfd5k5dcx7q9x7rk"; depends=[AUCRF ggplot2 randomForest ROCR UsingR WilcoxCV]; }; RFmerge = derive2 { name="RFmerge"; version="0.1-6"; sha256="1pskpfn9wcjq54szcskqakgnv0wwikyadhb1780icivmp10nklnn"; depends=[pbapply randomForest raster sf sp zoo]; }; RForcecom = derive2 { name="RForcecom"; version="1.1"; sha256="1ch1pwpnqagzb9n4qbgr804bmnz819kp36r5a4zhijmq8xpv3qr2"; depends=[httr plyr RCurl XML]; }; RFormatter = derive2 { name="RFormatter"; version="0.1.1"; sha256="0jmzdc2cl4vvffsyfwp493fiygh9xinhv970qxp1667rw8wlap8l"; depends=[formatR]; }; @@ -3383,7 +3391,7 @@ in with self; { RGeode = derive2 { name="RGeode"; version="0.1.0"; sha256="1g8ha6zg4pvi8qimiihsa6rjfdcyj0q526l44jajjbqczmwg59lv"; depends=[MASS Rcpp]; }; RGoogleAnalytics = derive2 { name="RGoogleAnalytics"; version="0.1.6"; sha256="05wbcdksx5g6y7x4r1pvc9is3afxbpdxdbmc6b4jhn46rg4228z4"; depends=[digest httr lubridate]; }; RGoogleAnalyticsPremium = derive2 { name="RGoogleAnalyticsPremium"; version="0.1.1"; sha256="0d22pdd5kvnrspikfb66ny07pgx96rvykr0zi78rwn6g1symdb4q"; depends=[httr jsonlite lubridate]; }; - RGoogleFit = derive2 { name="RGoogleFit"; version="0.3.1"; sha256="0g4r5vb9zv6mqym1mh028ic9hkmlpklrhq4ks5sys7y60ps893k1"; depends=[bit64 httr jsonlite RCurl]; }; + RGoogleFit = derive2 { name="RGoogleFit"; version="0.4.0"; sha256="0k1vvl4l6pq37llpbq996rbghdfld7mz7bhzbpw393fmrkd45vyi"; depends=[bit64 httr jsonlite RCurl]; }; RGraphics = derive2 { name="RGraphics"; version="2.0-14"; sha256="0bv95g17pvpq3nji0akphdaznh9k85hf5z78qypxwfqr76brxd05"; depends=[ggplot2 lattice]; }; RGreenplum = derive2 { name="RGreenplum"; version="0.1.2"; sha256="1mc0zmmnb9306j2cjn1j71bp35ri8p35rw6rlmrqyxgpvlw09r3d"; depends=[DBI RPostgres]; }; RGtk2 = derive2 { name="RGtk2"; version="2.20.36"; sha256="1vzb3wklm2iwhvggalalccr06ngx6zgv3bxjb8c3rsg9va82bzyp"; depends=[]; }; @@ -3402,15 +3410,15 @@ in with self; { RImageJROI = derive2 { name="RImageJROI"; version="0.1.1"; sha256="0a4sa60klbpl31qxxvjjbksdhvs3vwm9na1v7014v93fzxy6bjas"; depends=[spatstat]; }; RImagePalette = derive2 { name="RImagePalette"; version="0.1.1"; sha256="054w8xzsn330qg7piq6ajhji9na2swkkdis2567cy3q099npfl5v"; depends=[ggplot2]; }; RImpact = derive2 { name="RImpact"; version="1.0"; sha256="010bdq6r2fv4rs78kl1ixnw1di39v90ckh8bblzi0wv4adlbaza4"; depends=[]; }; - RInSp = derive2 { name="RInSp"; version="1.2.3"; sha256="1nm29q2gysway4r7rdjr08m0w8lh2m9akhjh7swgjwrg4f15kfmy"; depends=[]; }; - RInside = derive2 { name="RInside"; version="0.2.15"; sha256="0azhialpdkfm5yzgazq2mfynm8ndyg9d9b569jmg6qa9b2iqf78y"; depends=[Rcpp]; }; + RInSp = derive2 { name="RInSp"; version="1.2.4"; sha256="1rfikmrz1y7sx9qwsqh5ifqryf6218n9dbhfmk2w2vl2pdgw4xyr"; depends=[]; }; + RInside = derive2 { name="RInside"; version="0.2.16"; sha256="03iabanmj5xkgq7r1n1rkmzjf2zz484637nmd1qg61ga53hsvr3s"; depends=[Rcpp]; }; RItools = derive2 { name="RItools"; version="0.1-17"; sha256="1shcvkgsyjk9jmpf7icj1zjlvmqa11scmymc8cycnffax604frbm"; depends=[abind SparseM survival svd xtable]; }; - RJDBC = derive2 { name="RJDBC"; version="0.2-7.1"; sha256="1d36js3kwlghsjxfhv7rl8nvg210hxwrx8sdxrxb0inwlqsash25"; depends=[DBI rJava]; }; - RJDemetra = derive2 { name="RJDemetra"; version="0.1.4"; sha256="0ddps7i7c9hj36jp0567x1fzks981vw45bz16c1dablskw87b0sf"; depends=[rJava]; }; - RJSDMX = derive2 { name="RJSDMX"; version="2.1-0"; sha256="1z1fhm6as9m35v11n5npv3mlaaal7w5c04g4yl2p26ljsmssfbsh"; depends=[rJava zoo]; }; + RJDBC = derive2 { name="RJDBC"; version="0.2-8"; sha256="1qfq1vjlxhg3hmb1169zkss7kng74jhjninqkfr3cca8x1fq9593"; depends=[DBI rJava]; }; + RJDemetra = derive2 { name="RJDemetra"; version="0.1.5"; sha256="16iri92h0smf2vqwr0za4698qidncmqb4fimbidizqr7205xa1cw"; depends=[rJava]; }; + RJSDMX = derive2 { name="RJSDMX"; version="2.3-3"; sha256="02lbg82g4abng5vcn2g8ghvmg69q35my8smnbvd09yvha8hb49ps"; depends=[rJava zoo]; }; RJSONIO = derive2 { name="RJSONIO"; version="1.3-1.4"; sha256="141ijm9570mg1180isvi0jb9vd3b08s5gb9dl1wa5v0m3s9jq52l"; depends=[]; }; RJSplot = derive2 { name="RJSplot"; version="2.5"; sha256="0p2zqbq29pfjl703wqqjzgmif7yfzz7l8rzarjf5axkdy7w7fcyl"; depends=[]; }; - RJafroc = derive2 { name="RJafroc"; version="1.3.1"; sha256="1sa5x9ya2sgddvvrp5x7v12wcm0x1f5v0ja4flpxqqiv4fcsfni3"; depends=[bbmle binom dplyr ggplot2 mvtnorm numDeriv openxlsx Rcpp stringr]; }; + RJafroc = derive2 { name="RJafroc"; version="1.3.2"; sha256="11waf05ljzfrizsbb2y6bd2cd8k7950kbq26sfyfgf4idh5w0mbp"; depends=[bbmle binom dplyr ggplot2 mvtnorm numDeriv openxlsx Rcpp stringr]; }; RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; }; RKEAjars = derive2 { name="RKEAjars"; version="5.0-4"; sha256="1j4643xc8k3zy4rv0h8dd154jafihnjr43wzz3d93j11g2w9xhq3"; depends=[rJava]; }; RKEEL = derive2 { name="RKEEL"; version="1.3.1"; sha256="0k13j460jalmjdicrm7rqxb1b25cx1h4c276xbiybmhrmzmjlv5y"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; @@ -3420,6 +3428,7 @@ in with self; { RKUM = derive2 { name="RKUM"; version="0.1.1"; sha256="1w0v6l61dm7xixnyywsc7xziixz7k9r1ja26zcy77nry5kn6v60q"; depends=[]; }; RKelly = derive2 { name="RKelly"; version="1.0"; sha256="0mkpc95j67rg2gcj2fc4w8kv4v31cpiyvh660y8kc2fjr5q4aj3l"; depends=[]; }; RKlout = derive2 { name="RKlout"; version="1.0"; sha256="17mx099393b1m9dl3l5xjcpzmb9n3cpjghb90m9nidccxkhacmqf"; depends=[RCurl]; }; + RKorAPClient = derive2 { name="RKorAPClient"; version="0.5.7"; sha256="19sya8zajmpxl4yc9y9b6qmd816zxdlyymm8v6swykh4xlr3ghfg"; depends=[broom dplyr ggplot2 highcharter htmlwidgets httr jsonlite keyring lubridate magrittr plotly PTXQC purrr R_cache tibble tidyr]; }; RLRsim = derive2 { name="RLRsim"; version="3.1-3"; sha256="1r0xqay3jfg435dh9fqc6yy73wjffp658da194rx63vpfhshgz8w"; depends=[lme4 mgcv nlme Rcpp]; }; RLT = derive2 { name="RLT"; version="3.2.2"; sha256="1a8cip975z99g8ljng4y86wv1gf1xwg0sqnxz79wj6zxpw8fk37c"; depends=[]; }; RLeafAngle = derive2 { name="RLeafAngle"; version="1.0"; sha256="1anks22hn6qpac556p99kilkhc80h572dvcyz3wj1nqffdrhgrh3"; depends=[]; }; @@ -3437,7 +3446,8 @@ in with self; { RMTL = derive2 { name="RMTL"; version="0.9"; sha256="08da67wvzmibziqhnlzh43sydaihk4rsq2k5hs6ih3jkkidrhlgv"; depends=[corpcor doParallel foreach MASS psych]; }; RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; }; RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; }; - RMaCzek = derive2 { name="RMaCzek"; version="1.2.0"; sha256="02wkcn079pi5il7n0dqyq89qjn0jxwcdzmm5yr894cn9npmkxgzb"; depends=[GA seriation]; }; + RMaCzek = derive2 { name="RMaCzek"; version="1.3.2"; sha256="17w3ay8x8laqqfzzl34b7fsyk029rxss20bafh14yksw2qkvi8qy"; depends=[GA seriation]; }; + RMallow = derive2 { name="RMallow"; version="1.1"; sha256="1s6a3347739rfc8rrh2773b278gcbp8hf5j5psm61fz7bavy9gcj"; depends=[combinat]; }; RMariaDB = derive2 { name="RMariaDB"; version="1.0.8"; sha256="1xcr5lg9da4a49dcqy3hhrpz5jn51dqa6dc50vmkq1nw372yv2iw"; depends=[BH bit64 DBI hms plogr Rcpp]; }; RMark = derive2 { name="RMark"; version="2.2.7"; sha256="0qxa383cagzqrnfc3izybb4lrg8z1r3nw1j5b7h4wkjwy0k3kczb"; depends=[coda matrixcalc msm]; }; RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; }; @@ -3445,24 +3455,24 @@ in with self; { RMixtComp = derive2 { name="RMixtComp"; version="4.1.0"; sha256="00hygbbzbr5sdbhjzg0k4a7wj88dscmaln6bnxl6ywbzhdh902x4"; depends=[ggplot2 plotly RMixtCompIO RMixtCompUtilities scales]; }; RMixtCompIO = derive2 { name="RMixtCompIO"; version="4.0.2"; sha256="03dlljykbn2jjnrys2s02vz091f09f92c7h53qxsd2r19l59ymnf"; depends=[BH doParallel foreach Rcpp RcppEigen]; }; RMixtCompUtilities = derive2 { name="RMixtCompUtilities"; version="4.1.0"; sha256="0c6sjn6j0g6zc44w5knsgd6ga138gci54yilak8w0xrv5kr7mj3w"; depends=[ggplot2 plotly scales]; }; - RMySQL = derive2 { name="RMySQL"; version="0.10.18"; sha256="0r4626sk78fhlgivr0c7mwg9mj29ayr0iz5x90rdl4d5nc2r6kq4"; depends=[DBI]; }; - RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.2"; sha256="07wk0i8iz3cvkiqawxhm61g3nka8adw0zrrv60zx329gg49w0ycl"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; }; + RMySQL = derive2 { name="RMySQL"; version="0.10.20"; sha256="0lv9m6zpm8dgv7yixr6xhw379vbq45d7n7gkrmjrppdj8vcih77i"; depends=[DBI]; }; + RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.3"; sha256="1fn3q49dswi8hsyxkkgmq35gbdmnn72kzmfk89vd7gjvm67skvm6"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; }; RNAsmc = derive2 { name="RNAsmc"; version="0.4.0"; sha256="17gkhmnrxa1zwh6qhc0x48smgyq35g5gdb4wv0m5pnbyhkqzs7sq"; depends=[RRNA]; }; RNAstructureModuleMiner = derive2 { name="RNAstructureModuleMiner"; version="0.1.0"; sha256="026r1h4z1jdfww0ay9iixa77ax6b19pgp589bbn77xg1vwjjlbsk"; depends=[RRNA]; }; RNCBIEUtilsLibs = derive2 { name="RNCBIEUtilsLibs"; version="0.9"; sha256="1h1ywx8wxy6n2rbpmjbqw4c0djz29pbncisd0mlbshj1fw226jba"; depends=[rJava]; }; - RNCEP = derive2 { name="RNCEP"; version="1.0.8"; sha256="0nkx33997c5rgc3ch5a2bb6rrw5xw1y71rliygw5k1ldi335rsm7"; depends=[abind fields fossil maps RColorBrewer sp tgp]; }; + RNCEP = derive2 { name="RNCEP"; version="1.0.9"; sha256="1rbz8i4id5an95pcw6mbc30cjkj3pr5hc4hzfkcyhy5nnfxz784b"; depends=[abind fields maps RColorBrewer sp tgp]; }; RND = derive2 { name="RND"; version="1.2"; sha256="1rl5apgw43c841z0lapi9z2jn979dvqh4x1qkqx1ad77zcq87c85"; depends=[]; }; RNGforGPD = derive2 { name="RNGforGPD"; version="1.0.2"; sha256="0z1jawq3342ffbv1jp7kfzll9pac5ff09qb3fd0vz564kqcvik0n"; depends=[corpcor Matrix mvtnorm VGAM]; }; RNHANES = derive2 { name="RNHANES"; version="1.1.0"; sha256="045ykpgxvc22blbp47ysbk6a6x4akjd39pjr114cr23s7f48g6h4"; depends=[dplyr foreign rvest survey xml2]; }; RNOmni = derive2 { name="RNOmni"; version="0.7.1"; sha256="0lzd820x9yw90ddzmxvd89pkqc3nrljlc6kz4cab50zj3s755ack"; depends=[abind foreach plyr Rcpp RcppEigen]; }; RNRCS = derive2 { name="RNRCS"; version="0.2.5"; sha256="19q78l8mh4701vqvr36vqc87n39s5ivzhiy5lvnxbd4dgibk1jr2"; depends=[ggplot2 magrittr rvest xml2]; }; RNaviCell = derive2 { name="RNaviCell"; version="0.2"; sha256="15k8hkagn5520fy7x672fy329s2v7l0x44s44f6v7ql9mmg4b635"; depends=[RCurl RJSONIO]; }; - RNeXML = derive2 { name="RNeXML"; version="2.4.0"; sha256="164krdabq3xqw8djmbpwj20vx074x9dgcdy5l1hr06cmz2bahqp1"; depends=[ape dplyr httr lazyeval plyr reshape2 stringi stringr tidyr uuid XML xml2]; }; + RNeXML = derive2 { name="RNeXML"; version="2.4.3"; sha256="09d915hl8bfs3qg1lijh5kvs86rf0w25rh8p5p4mjnjdva9ir05z"; depends=[ape dplyr httr lazyeval plyr reshape2 stringi stringr tidyr uuid XML xml2]; }; RNentropy = derive2 { name="RNentropy"; version="1.2.2"; sha256="0chvmrvpyyghilwb63y6pd1zp94i5qhpv5w19x9nw0ypk86pp2dj"; depends=[]; }; RNetCDF = derive2 { name="RNetCDF"; version="2.1-1"; sha256="0i670giq741d78ps6y98xbnqdybkv2svmdd6jbvcbpgdry6pfw89"; depends=[]; }; RNetLogo = derive2 { name="RNetLogo"; version="1.0-4"; sha256="1z7jp454k197c0zbkn64zmf25wadkiznv3w2csgiz917cbx6xcn1"; depends=[igraph rJava]; }; - RNewsflow = derive2 { name="RNewsflow"; version="1.2.1"; sha256="07469svqqjskrf04cm0ga5h94yb5h845dhz5gp740f16ymm0gkci"; depends=[data_table igraph Matrix quanteda Rcpp RcppEigen RcppProgress scales stringi tm wordcloud]; }; - RNifti = derive2 { name="RNifti"; version="1.0.1"; sha256="0hfid40pgfi1ykqka8y3v0m7h0iyd6fbvycvqlad3ibmbg621f0w"; depends=[Rcpp]; }; + RNewsflow = derive2 { name="RNewsflow"; version="1.2.3"; sha256="0cbvcz2dgx3nvhvj73k6s901v5p5fy8zl4hx4r696cf14n60c0yb"; depends=[data_table igraph Matrix quanteda Rcpp RcppEigen RcppProgress scales stringi tm wordcloud]; }; + RNifti = derive2 { name="RNifti"; version="1.1.0"; sha256="1z8ninp3aq18w0slcfn8r2fp48cdz8l0k0namsrnvgyp8lzcpqpn"; depends=[Rcpp]; }; RNiftyReg = derive2 { name="RNiftyReg"; version="2.6.7"; sha256="1qx6igv0kdja2c139gbs42cwfjwj7ifcxxlswydvja03iz3k53wz"; depends=[ore Rcpp RcppEigen RNifti]; }; ROAuth = derive2 { name="ROAuth"; version="0.9.6"; sha256="0vhsp8qybrl94898m2znqs7hmlnlbsh8sm0q093dwdb2lzrqww4m"; depends=[digest RCurl]; }; ROC632 = derive2 { name="ROC632"; version="0.6"; sha256="0vgv4rclvb79mfj1phs2hmxhwchpc5rj43hvsj6bp7wv8cahfg5g"; depends=[penalized survival survivalROC]; }; @@ -3473,9 +3483,8 @@ in with self; { ROCwoGS = derive2 { name="ROCwoGS"; version="1.0"; sha256="029nramxwhzqim315g1vkg1zsszzkic28w6ahwg9n7bk9d08adzk"; depends=[]; }; RODBC = derive2 { name="RODBC"; version="1.3-16"; sha256="0fcnszrkk7llz26wccs97glddw793i0f9bd7rwxrld24vn1lng92"; depends=[]; }; RODBCDBI = derive2 { name="RODBCDBI"; version="0.1.1"; sha256="0jkcc1lm8drsx1pkfj5h6rlbr98cgpvbf9ndzdwr048f3s8gd26i"; depends=[DBI RODBC]; }; - RODBCext = derive2 { name="RODBCext"; version="0.3.1"; sha256="06ky97k93bbrlxm4fg770mnz6yqp2zzgwmvzdqrpanfbg7qkfwwn"; depends=[RODBC]; }; RODM = derive2 { name="RODM"; version="1.1"; sha256="0cyi2y3lsw77gqxmawla5jlm4vnhsagh3ykdgb6izxslc4j2fszx"; depends=[RODBC]; }; - ROI = derive2 { name="ROI"; version="0.3-2"; sha256="0kx71843sfbml05kdbaf9lx67aqcjhdk4klg8yr020j5100cf17w"; depends=[registry slam]; }; + ROI = derive2 { name="ROI"; version="0.3-3"; sha256="06d9cqa7g5n10cynkkmy42ilzs7jj2lfz9snimis6ipgkm5n0xr9"; depends=[registry slam]; }; ROI_models_globalOptTests = derive2 { name="ROI.models.globalOptTests"; version="1.1"; sha256="0cr4iy4p590zsp47jqyrvhamc4xa9nkpnnddmwqbkgvzmzxf83ap"; depends=[globalOptTests ROI]; }; ROI_models_miplib = derive2 { name="ROI.models.miplib"; version="0.0-2"; sha256="1brlqyprvrq32ww36j3aa4nqfcn1q1mfv58vv92rlv23cb6b94sv"; depends=[R_utils Rglpk ROI]; }; ROI_models_netlib = derive2 { name="ROI.models.netlib"; version="1.1"; sha256="0dhiiyw9srlih3x381jlgl11y0vr9qyn91b7xi208a0vpsmassa7"; depends=[ROI]; }; @@ -3490,9 +3499,9 @@ in with self; { ROI_plugin_neos = derive2 { name="ROI.plugin.neos"; version="0.3-1"; sha256="02apdbw5b0fknmm798g7nrfs25yjiyqza5b2cd4b6vvj2bjnwpsd"; depends=[ROI xml2 xmlrpc2]; }; ROI_plugin_nloptr = derive2 { name="ROI.plugin.nloptr"; version="0.3-3"; sha256="0ls241xahmd77q2s02mpzr1i10nq5vqgic5j786y9q00f6c3lxyd"; depends=[nloptr ROI]; }; ROI_plugin_optimx = derive2 { name="ROI.plugin.optimx"; version="0.3-2"; sha256="13dfczn6dl4d1sx15davn5f4vcri7lk2zzh8ib28268lbwh9ma2s"; depends=[optimx ROI]; }; - ROI_plugin_qpoases = derive2 { name="ROI.plugin.qpoases"; version="0.3-2"; sha256="1mclf6nf9ci331pgf3mw2fci502991vfzkiqx4l2l6n662jpxpqy"; depends=[checkmate Rcpp ROI slam]; }; + ROI_plugin_qpoases = derive2 { name="ROI.plugin.qpoases"; version="0.3-3"; sha256="132zr4nx220697j2x1vm4sl1wklbrnh549zh5gb0zn7q206r56r4"; depends=[checkmate Rcpp ROI slam]; }; ROI_plugin_quadprog = derive2 { name="ROI.plugin.quadprog"; version="0.2-5"; sha256="1c4fd16kgg60gfs52xc64ii4kzl8fb8qz3rpy69d08avb4q6grir"; depends=[quadprog ROI slam]; }; - ROI_plugin_scs = derive2 { name="ROI.plugin.scs"; version="0.3-1"; sha256="1n73qm0aw0azwg9m1r3i3qpymzqy7ly8cgsmr00n8pwsgg858h8v"; depends=[ROI scs slam]; }; + ROI_plugin_scs = derive2 { name="ROI.plugin.scs"; version="0.3-2"; sha256="0g48awvbsnmdlviksyc57piqvhwfx63iq68ymyrgfxfwkjrk4fwl"; depends=[ROI scs slam]; }; ROI_plugin_symphony = derive2 { name="ROI.plugin.symphony"; version="0.2-5"; sha256="1kpa82g33i2fdcnkpcqdpslj14ilrl7cp0fq1jmp4vj8ddz1s9g5"; depends=[ROI Rsymphony slam]; }; ROMDB = derive2 { name="ROMDB"; version="0.1.0"; sha256="14jijcqd2zmps8sacx5nwfclj5yvqf4nx72y8pfvr0nswqqb895i"; depends=[dplyr httr magick purrr RODBC stringr]; }; ROMIplot = derive2 { name="ROMIplot"; version="1.0"; sha256="1njbsvnz7wrsv9l1p70p1ygmckaibz5i6jmvb0sfalp5jdcgl85n"; depends=[MortalitySmooth RCurl]; }; @@ -3506,15 +3515,15 @@ in with self; { ROptEst = derive2 { name="ROptEst"; version="1.2.1"; sha256="0gjdgynmg8499jm5gbnmjipnn1bl7h1rja8lhgbaw48lmq5sr801"; depends=[distr distrEx distrMod MASS RandVar RobAStBase startupmsg]; }; ROptEstOld = derive2 { name="ROptEstOld"; version="1.2.0"; sha256="08njyxb8bnjb9nas3szqvqkfv83lc0187b7biis2nl2rgq6rljzy"; depends=[distr distrEx evd RandVar]; }; ROptRegTS = derive2 { name="ROptRegTS"; version="1.2.0"; sha256="1wy54kjrpfvj2k9ndmq27zzgx6aygh85f7c83g7gn8d5b2y91qy4"; depends=[distr distrEx RandVar ROptEstOld]; }; - ROptSpace = derive2 { name="ROptSpace"; version="0.2.1"; sha256="1sc7f2q9856c351nqb6dgq1d34jpahvfxb5l43npa04lm1hh7hqw"; depends=[Rdpack]; }; + ROptSpace = derive2 { name="ROptSpace"; version="0.2.2"; sha256="09crzp3anw9p9fknw9gv8kzk1gmmdw0hbw1fa2r8i6601xi81ap4"; depends=[Rcpp RcppArmadillo Rdpack]; }; ROptimizely = derive2 { name="ROptimizely"; version="0.2.0"; sha256="059zfn6y687h989wryvpqwgnp9njrrr4ys0gf1ql4pw85b2c50dy"; depends=[httr jsonlite]; }; ROracle = derive2 { name="ROracle"; version="1.3-1"; sha256="07zqzwaq5iqkjcmns2ahl1l71xjlznialb3dbyl4lwsh3p3fhf2n"; depends=[DBI]; }; - RPANDA = derive2 { name="RPANDA"; version="1.7"; sha256="0gf25gj9461bl6hi205zvbc17pjw7r8900mirrp5zh08mjzpjmmd"; depends=[ape cluster coda corpcor deSolve fields fpc geiger glassoFast igraph Matrix mvMORPH mvtnorm phytools picante pracma pspline pvclust Rmpfr TESS]; }; + RPANDA = derive2 { name="RPANDA"; version="1.8"; sha256="0k9k3zc68kr17jd5r0m6jwmfhf43k5r44h4kqa6kdpd03h60m1rh"; depends=[ape cluster coda corpcor deSolve fields fpc geiger glassoFast igraph Matrix mvMORPH mvtnorm phytools picante pracma pspline pvclust Rmpfr TESS]; }; RPCLR = derive2 { name="RPCLR"; version="1.0"; sha256="03kpyszsjb656lfwx2yszv0a9ygxs1x1dla6mpkhcnqw00684fab"; depends=[MASS survival]; }; RPEClust = derive2 { name="RPEClust"; version="0.1.0"; sha256="1ysw45335lrxmj3j17xyvgz76p00v80f2m7wxfndh91wklqxzm8r"; depends=[clue clusteval mclust]; }; RPEGLMEN = derive2 { name="RPEGLMEN"; version="1.0.1"; sha256="1bcci0ih71bxdrwdz336c5wx47d094nczazy8mv3v41vivrk4jkh"; depends=[PerformanceAnalytics Rcpp RcppEigen RPEIF]; }; - RPEIF = derive2 { name="RPEIF"; version="1.0.3"; sha256="15v2z6iiai7vhbyhql199dpdb4762lhkqbzm24iraqfffxkbhyb8"; depends=[PerformanceAnalytics Rcpp RobStatTM xts zoo]; }; - RPESE = derive2 { name="RPESE"; version="1.0.1"; sha256="0hp7nc86gbmnchvhivywh1cg2w6cbvihypdq0mi1r86pxc0n2z61"; depends=[boot PerformanceAnalytics robustbase RPEGLMEN RPEIF sandwich xts zoo]; }; + RPEIF = derive2 { name="RPEIF"; version="1.0.7"; sha256="1n0b3fdl88wlncfm0k9cy7nj9mgkv3dv724ld2haypmmnbhkhr4j"; depends=[PerformanceAnalytics xts zoo]; }; + RPESE = derive2 { name="RPESE"; version="1.0.3"; sha256="0a9nq60jg2bhj5cbbgkpz0zisqwrv7cgifbiampx2y6sfrkmhbjg"; depends=[boot PerformanceAnalytics RPEGLMEN RPEIF sandwich xts zoo]; }; RPEXE_RPEXT = derive2 { name="RPEXE.RPEXT"; version="0.0.1"; sha256="0m5ml8ywxrf66mjz6m3xp1lajd7wdq9g7xsaln8n7ykq7h5615fc"; depends=[]; }; RPEnsemble = derive2 { name="RPEnsemble"; version="0.4"; sha256="0y9g22swcz0m5jbzi87ahxw27fb3jlf3iwvxb73kkzixqlvksw9y"; depends=[class MASS]; }; RPMG = derive2 { name="RPMG"; version="2.2-3"; sha256="1di2bcf58z6gc3xknzx35znsjsy1714swvxkdhlq1ljidbdbmmbl"; depends=[]; }; @@ -3526,7 +3535,7 @@ in with self; { RPostgres = derive2 { name="RPostgres"; version="1.2.0"; sha256="16fjwaj1qvr1i9naq19jg2z3dqssi3pp4wwviyqlkj1mmbyh28zx"; depends=[BH bit64 blob DBI hms plogr Rcpp withr]; }; RPresto = derive2 { name="RPresto"; version="1.3.4"; sha256="17hwq76vzr27prwisfxahs1ix9grldknaywnq3v2a3s2x79v8vbv"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; RProbSup = derive2 { name="RProbSup"; version="2.1"; sha256="0lmv4x235xiykc8jfnp15l4yypm99yz6spsnaxacp49y2aw23jpy"; depends=[]; }; - RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.14"; sha256="1jn288796g61sfffnrfm0nm6igyv0yixlb09yhw8fqih7qg14lnx"; depends=[Rcpp RCurl]; }; + RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.15"; sha256="0m7fm6d3yscridx332ljxm3mjsz82knnq4796xr1rhalddjhckvk"; depends=[Rcpp RCurl]; }; RPtests = derive2 { name="RPtests"; version="0.1.4"; sha256="1r30pslbjq3dip41la81jlin2vhxdmayg902x9ryjy554awfgh7j"; depends=[glmnet randomForest Rcpp]; }; RPublica = derive2 { name="RPublica"; version="0.1.3"; sha256="1w2pn1g44a00ls8kkzj53a739pq6vzp38px2k0yh10rlzimmb21l"; depends=[curl httr jsonlite]; }; RPushbullet = derive2 { name="RPushbullet"; version="0.3.3"; sha256="0acydm5xc1j6yjmjipfrg7pvc6h0jwihrg1rx97qwddds2xakkxy"; depends=[curl jsonlite]; }; @@ -3559,8 +3568,9 @@ in with self; { RSNNS = derive2 { name="RSNNS"; version="0.4-12"; sha256="1fa32wrhv3q0sdgrcrqrazvvylbn83d75bw8d0ncjfspf7dgx3di"; depends=[Rcpp]; }; RSNPset = derive2 { name="RSNPset"; version="0.5.3"; sha256="1llx6anwkl4as0hdyvmsrlg9z8mkn9p1qxgs6kqs39w87gyx0j36"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; }; RSPS = derive2 { name="RSPS"; version="1.0"; sha256="0ynxhgnxsf27qm8r5d9lyd59zksnc3kvx35hy25vff8j3bg7fqgi"; depends=[gridExtra lattice plyr]; }; + RSQL = derive2 { name="RSQL"; version="0.1.1"; sha256="108jv8p0q4cmpjm701k6c2i5vcyaq9xn6wg97rih639gmdaqn28s"; depends=[DBI lgr R6 RSQLite]; }; RSQLite = derive2 { name="RSQLite"; version="2.2.0"; sha256="1m38sj8rwbf3p2lhqabcp7c7djk7s9ng37cz39yxk706v9pi4380"; depends=[BH bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; - RSSL = derive2 { name="RSSL"; version="0.8"; sha256="0pynj5jppl2bxh0hh6lhqr6s54v0ny4mabk0zrx8xzcbidlwyhn1"; depends=[cluster dplyr ggplot2 kernlab MASS Matrix quadprog Rcpp RcppArmadillo reshape2 scales tidyr]; }; + RSSL = derive2 { name="RSSL"; version="0.9.1"; sha256="0845azknk90ix8xgcj18mdn7jbicalid4fcqyxzp747qswy4hh98"; depends=[cluster dplyr ggplot2 kernlab MASS Matrix quadprog Rcpp RcppArmadillo reshape2 scales tidyr]; }; RSSOP = derive2 { name="RSSOP"; version="1.1"; sha256="119xrxpaf68qdb2kj2pbaja6im2nbxsgibb1bnlpnc3fcxkmqcsf"; depends=[]; }; RSSampling = derive2 { name="RSSampling"; version="1.0"; sha256="0p10l7qmksx4ysz1jb84f9nbqzig8wxhwy33yk8hq29nb5i4c9ik"; depends=[LearnBayes]; }; RSVGTipsDevice = derive2 { name="RSVGTipsDevice"; version="1.0-7"; sha256="0jdr8l0hp4kzsvlgs8j1m74sr98z4v2lmiqinmc238m406nhppab"; depends=[]; }; @@ -3569,7 +3579,7 @@ in with self; { RScelestial = derive2 { name="RScelestial"; version="1.0.0"; sha256="1amvzp4a69cpm13affvpza8zs1n78a3y93bwpv0fzi2b60im4y9x"; depends=[Rcpp]; }; RSclient = derive2 { name="RSclient"; version="0.7-3"; sha256="07mbw6mcin9ivsg313ycw2pi901x9vjpmi6q7sms1hml4yq50k6h"; depends=[]; }; RSeed = derive2 { name="RSeed"; version="0.1.60"; sha256="0rvb6w4z5c2wcdgx5w6vv7c8il8d0096pgv3fyvw21ag25z605jc"; depends=[graph RBGL sybil]; }; - RSelenium = derive2 { name="RSelenium"; version="1.7.5"; sha256="1ih22z3p1p673dhbjsfmli94bzqp5xk3psslf4c0r9dvmw9h6s5c"; depends=[binman caTools httr openssl wdman XML]; }; + RSelenium = derive2 { name="RSelenium"; version="1.7.7"; sha256="1xn5fdbzmq7b1f5fc9ls23g177bmnd8bn4p4d8aafr6z3jwkmfir"; depends=[binman caTools httr openssl wdman XML]; }; RSentiment = derive2 { name="RSentiment"; version="2.2.2"; sha256="15d1llzxg1apkwykpb7pic2d5lfj9i9a55hab067wrz2yq5jsyfa"; depends=[NLP openNLP plyr stringr]; }; RSiena = derive2 { name="RSiena"; version="1.2-23"; sha256="04picf0f9rahd37r9fm0cisgaiy2aqshnzfh7cvhcqfaqmpxc8kp"; depends=[lattice MASS Matrix]; }; RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.16"; sha256="1plcmxj6sahdy3vvcmxry8cbq1j23bqzhnhn593bkwmzczka24cy"; depends=[base64enc digest httr jsonlite plyr stringr]; }; @@ -3588,6 +3598,7 @@ in with self; { RTConnect = derive2 { name="RTConnect"; version="0.1.4"; sha256="1000jmmqzyhl6vh1ii75jdh88s9inaz52gvfwcin2k2zr7bi91ba"; depends=[]; }; RTD = derive2 { name="RTD"; version="0.1.1"; sha256="1f36wn9f7wjadvll234m97wqfj4adpvif4x0ywn4wfk91cwa5zib"; depends=[httr jsonlite openssl readr urltools]; }; RTDE = derive2 { name="RTDE"; version="0.2-1"; sha256="1dkv0g760384jmyypffl5kbnsancjx272j91ffpgmg3lmsy8nhqq"; depends=[]; }; + RTL = derive2 { name="RTL"; version="0.1.1"; sha256="1p5i9khwa470hc9bhxlxqh8w5vp73jcsr45mrhwpcyz3i2dlzdzr"; depends=[dplyr EIAdata fabletools feasts fGarch fitdistrplus forecast ggplot2 httr lubridate magrittr PerformanceAnalytics plotly purrr Quandl quantmod readr stringr tibble tibbletime tidyquant tidyr timetk tsibble xts zoo]; }; RTOMO = derive2 { name="RTOMO"; version="1.1-6"; sha256="03jb96ahzgp662vj2v65giv8ss61vad5w26kvq8hg9q06z879jza"; depends=[GEOmap RPMG RSEIS splancs]; }; RTaxometrics = derive2 { name="RTaxometrics"; version="2.3"; sha256="02446y86g21i37ycavg0xc1ggxk0k93d38n71fis9fav06lywxx3"; depends=[]; }; RTest = derive2 { name="RTest"; version="1.2.6"; sha256="0f7wxscswkg2r6isp0vjfs44dbgqijmh97p053w2mcqi6z1s5cip"; depends=[base64 glue jsonlite magick magrittr rlang stringr testthat XML]; }; @@ -3596,7 +3607,7 @@ in with self; { RTransferEntropy = derive2 { name="RTransferEntropy"; version="0.2.12"; sha256="066wyama0gk81l6kc0n31cmf007i1975i7hzvf46qbldvhsc52mc"; depends=[future future_apply Rcpp]; }; RTriangle = derive2 { name="RTriangle"; version="1.6-0.10"; sha256="07ya95gmv53i2argqwgad6wd4sslql2wl1rkvsmgsvmhsb4wp9hd"; depends=[]; }; RUnit = derive2 { name="RUnit"; version="0.4.32"; sha256="1wc1gwb7yw7phf8b0gkig6c23klya3ax11c6i4s0f049k42r78r3"; depends=[]; }; - RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-74"; sha256="0m4xynjjl72znnxrpific8haqff33jsimn6ksaf96aims347lpgv"; depends=[ade4 boot car FactoMineR lme4 MASS mixOmics nnet pls pspearman vegan]; }; + RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-75"; sha256="14wgxly7lc301i7avby3sy1prjr0bfyvky1krn89j217mz12qk1p"; depends=[ade4 boot car FactoMineR lme4 MASS mixOmics nnet pls pspearman vegan]; }; RVFam = derive2 { name="RVFam"; version="1.1"; sha256="0gw8rgq11zndnqmay6y3y5rmmljvwhxzm2pqa90vs5413dnchq92"; depends=[coxme kinship2 lme4 MASS Matrix survival]; }; RVenn = derive2 { name="RVenn"; version="1.1.0"; sha256="016m00xv59lkwm2is32v5nr4lw5a1ymdnz34r3ffflcv9bfrc6n4"; depends=[ggforce ggplot2 magrittr pheatmap purrr rlang vegan]; }; RVerbalExpressions = derive2 { name="RVerbalExpressions"; version="0.1.0"; sha256="1p9wmpgqwnz95sr8km8y6kqax8fcz6sqg54wfdx44kiqkf1ybdsp"; depends=[magrittr]; }; @@ -3605,16 +3616,16 @@ in with self; { RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.13"; sha256="106lr6iz28gscczs18759zaki7dnxy1873swiakimfqmwpw9dp9n"; depends=[Rcpp]; }; RVtests = derive2 { name="RVtests"; version="1.2"; sha256="0k7w6ml981zvr5bix197qw4kaf7rz5jqnwqlxf7aryxbm39gk16c"; depends=[glmnet pls spls]; }; RWBP = derive2 { name="RWBP"; version="1.0"; sha256="104vr2cdk185hh4zn3vmqvb14p1q8ifk11wdgvk7fli1m1zxxwdd"; depends=[igraph lsa RANN SnowballC]; }; - RWDataPlyr = derive2 { name="RWDataPlyr"; version="0.6.2"; sha256="1928hyfmy21s586nafd5qajbypqslc96zfmxbi42rcmvzim16v3k"; depends=[data_table dplyr feather Rcpp tibble tidyr xts zoo]; }; + RWDataPlyr = derive2 { name="RWDataPlyr"; version="0.6.3"; sha256="14p347v8vgbw471j3nxxn69cxpljriy9hp9haq6gnhx6d0739rcd"; depends=[data_table dplyr feather Rcpp tibble tidyr xts zoo]; }; RWebLogo = derive2 { name="RWebLogo"; version="1.0.3"; sha256="1n65mlnr163ywjnyyngnigbj0wpgkr38c3nx8hw5r8mwjnf3d617"; depends=[findpython]; }; - RWeka = derive2 { name="RWeka"; version="0.4-41"; sha256="1grsq6wkvci2hs0vcr9zwrf7iyfrlxwag43l0k5hf8icazp8ffmf"; depends=[rJava RWekajars]; }; + RWeka = derive2 { name="RWeka"; version="0.4-42"; sha256="0111n0hr3a2gjd2pv5vlh8mian6k86cp0xrw0yyh6ijxhwl31rc4"; depends=[rJava RWekajars]; }; RWekajars = derive2 { name="RWekajars"; version="3.9.3-2"; sha256="06nsylv65z9hxym1b6qnwllh306bq5phsgr0qn4nyr5im8cv1rhn"; depends=[rJava]; }; - RWiener = derive2 { name="RWiener"; version="1.3-1"; sha256="0w12xvc18l002m8q6ad3laa667xzqjbcfqf0vvcmicgw2j3bbq6h"; depends=[]; }; + RWiener = derive2 { name="RWiener"; version="1.3-2"; sha256="1sk4racp77jbhjaqkghalg139aznchyn1yknyrv975ck040zs8cw"; depends=[]; }; RWildbook = derive2 { name="RWildbook"; version="0.9.3"; sha256="1pznzmv8n33hhj61h07fha1gzafcx705n8323cnz3mx6ziijfh28"; depends=[data_table jsonlite marked]; }; - RWsearch = derive2 { name="RWsearch"; version="4.6.2"; sha256="1sak4ihzvba83q1zvn65983qz50cb1nbz1mwiasr3bzz27hhdp4a"; depends=[brew latexpdf networkD3 sig sos XML]; }; - RXKCD = derive2 { name="RXKCD"; version="1.8-2"; sha256="081zrx293z4009p6fj2za0mkf04nikxmg3i45l667qvy7nmajqlc"; depends=[jpeg png RJSONIO]; }; + RWsearch = derive2 { name="RWsearch"; version="4.7.0"; sha256="1h6m5h9kbb3sl49ppaazac4y0nz57xw87sh9f4m50immg33il16z"; depends=[brew latexpdf networkD3 sig sos XML]; }; + RXKCD = derive2 { name="RXKCD"; version="1.9.2"; sha256="1yk12ic6kdbwc44ppag2yfnga7xjmifkglhvcw93vc3qg469mm15"; depends=[jpeg plyr png RJSONIO]; }; RXMCDA = derive2 { name="RXMCDA"; version="1.5.5"; sha256="1ci73q8xf3xxqw8b7sk83v5vz2cqgcb4lkx7qi3hd1ff4xkz1fpa"; depends=[kappalab XML]; }; - RXshrink = derive2 { name="RXshrink"; version="1.3.1"; sha256="1kj661g4dkdnnkrc7vh7qpvfrgj77db6lwvvlpbynn8n3l3qbg94"; depends=[lars]; }; + RXshrink = derive2 { name="RXshrink"; version="1.3.2"; sha256="00igwc4v2dc9328akrqswac7f4hn4ij03x9ck932xd0l67zfp8ah"; depends=[lars]; }; RYandexTranslate = derive2 { name="RYandexTranslate"; version="1.0"; sha256="0qrv5mnnkn5fs7vx6i74z46s0qj9f98km5bizgj00832qyrq8q1s"; depends=[httr jsonlite RCurl]; }; RYoudaoTranslate = derive2 { name="RYoudaoTranslate"; version="1.0"; sha256="1i3iyqh97vpn02bm66kkmw52ni29js30v18n2aw8pvr88jpdgxm4"; depends=[RCurl rjson]; }; RZabbix = derive2 { name="RZabbix"; version="0.1.0"; sha256="0c5803chpzvp7dk9pjfx5f0nqynb76ywakz04ah2nw07ypvcyjyr"; depends=[httr jsonlite]; }; @@ -3622,13 +3633,13 @@ in with self; { RZooRoH = derive2 { name="RZooRoH"; version="0.2.3"; sha256="0ihfc8hxqmlkx1xhkz3psw8szwjp01imasvynxbzrjmjf4q6amvq"; depends=[data_table doParallel foreach iterators RColorBrewer]; }; RaPKod = derive2 { name="RaPKod"; version="0.9"; sha256="1qxzi2lf431zd44bcd98ybhzydy1cz12g864l6r668jk91aqy1qg"; depends=[kernlab MASS proxy Rcpp RcppArmadillo]; }; RaProR = derive2 { name="RaProR"; version="1.1-5"; sha256="11hwg609pjcd13qnbchbs86c3q8f4nmh1xfxg3dsiijljl6lzx3n"; depends=[]; }; - RaceID = derive2 { name="RaceID"; version="0.1.7"; sha256="0rpjcd3vgzd09mfjxc8ji73ncl6d7f5zkv1z1f2nzpz9rhxpd3sp"; depends=[cluster coop FateID FNN fpc ggplot2 ica igraph irlba locfit MASS Matrix pheatmap propr quadprog randomForest RColorBrewer Rcpp Rtsne umap vegan]; }; + RaceID = derive2 { name="RaceID"; version="0.1.8"; sha256="0pkn9fdf0xi55nrylmqris9by1ywy3mcxkj0bcf4gp6knyqz6wz0"; depends=[cluster coop FateID FNN fpc ggplot2 ica igraph irlba locfit MASS Matrix pheatmap propr quadprog randomForest RColorBrewer Rcpp Rtsne umap vegan]; }; RadData = derive2 { name="RadData"; version="1.0.0"; sha256="14npn5vjcpvymdjkby83msjr3f1gsmzh0083gz6cgrp270fglkaw"; depends=[]; }; RadOnc = derive2 { name="RadOnc"; version="1.1.5"; sha256="0yz2pzcpz32xs04xfs90i714nn28cky7701w1h99cqsxsp892jkq"; depends=[geometry oro_dicom ptinpoly rgl]; }; RadTran = derive2 { name="RadTran"; version="1.0"; sha256="1sb8d4y3b37akbxhdavxrkp34zn3ip061b7gzy0ga57pyn76cvpn"; depends=[ReacTran rootSolve]; }; RadioGx = derive2 { name="RadioGx"; version="0.0.2"; sha256="1ls56zxsa5l6925ig7d9n3ffns1x0jkbd3zdk530nlffkralwz0k"; depends=[Biobase caTools cluster CoreGx KernSmooth magicaxis Matrix PharmacoGx RColorBrewer reshape2 scales]; }; RadioSonde = derive2 { name="RadioSonde"; version="1.4"; sha256="1v9jdpynmb01m3syhas1s08xxlvjawhlvjkyhils2iggi4xw4hiq"; depends=[]; }; - Radviz = derive2 { name="Radviz"; version="0.8.1"; sha256="1kk8xjlcyb52grj0xgjdkpx658678plrx1a3cfaf37xmvspid5j8"; depends=[dplyr ggplot2 rlang]; }; + Radviz = derive2 { name="Radviz"; version="0.8.2"; sha256="105zbrda3yf49sm8b0ysxc7gy0ia8xbp32fhyf70q6wm12jziz2z"; depends=[dplyr ggplot2 rlang]; }; RagGrid = derive2 { name="RagGrid"; version="0.2.0"; sha256="0crnpd75lyhd0awzqzqy7bzw4ydgxpyhy1ybb1ff4qsnisbjdbba"; depends=[crosstalk htmltools htmlwidgets knitr]; }; RainfallErosivityFactor = derive2 { name="RainfallErosivityFactor"; version="0.1.0"; sha256="16yrr2bl62m1nr81nzvmdq7s78f7fg50dah5dg5q4j4j7z8qfsqz"; depends=[]; }; Ramble = derive2 { name="Ramble"; version="0.1.1"; sha256="0225za85i5nvf8l89i5bz7nxsxykd3v9fp1wgihmncca6n8vhgpl"; depends=[]; }; @@ -3637,18 +3648,17 @@ in with self; { RandPro = derive2 { name="RandPro"; version="0.2.0"; sha256="1bhbg6lvgr9h6rq3g3ljm2422ngjb18maj80l7f659ql88c8h6mj"; depends=[caret e1071]; }; RandVar = derive2 { name="RandVar"; version="1.2.1"; sha256="17c6bx644n604zpggmwx1z3krgd9v7c88il45cf5yhp7zf7cc718"; depends=[distr distrEx startupmsg]; }; RandomCoefficients = derive2 { name="RandomCoefficients"; version="0.0.2"; sha256="04l0aczrlbkjk0687w2gxs85ia71yy69mgankwkl37ksznh6y81m"; depends=[fourierin ks orthopolynom polynom RCEIM rdetools robustbase sfsmisc snowfall statmod tmvtnorm VGAM]; }; - RandomFields = derive2 { name="RandomFields"; version="3.3.7"; sha256="0fnl1450k33vn49x0gc6xljhrrbcb2m7bl9dpn5r8v6yqk2hwjjx"; depends=[RandomFieldsUtils sp]; }; + RandomFields = derive2 { name="RandomFields"; version="3.3.8"; sha256="1l4r67vmdisdawlhv6l4lqsn5i8wg2p1hs7v5553b3j2mvyy424a"; depends=[RandomFieldsUtils sp]; }; RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.5.3"; sha256="0783z23rm5kv0x7796ggx6g07wpf18n7fjzv9r9ryji55sx3r0pa"; depends=[]; }; RanglaPunjab = derive2 { name="RanglaPunjab"; version="2.3.4"; sha256="01j3gww9kil02d44jwlkz6j7lwn2him830bnshkly0s7mgh22pgr"; depends=[jpeg shiny tidyverse]; }; RankAggreg = derive2 { name="RankAggreg"; version="0.6.5"; sha256="031mff1zydxqygx8bn3g0qpwq08kaq5bpmzy6z2y0fa03hgsxz5c"; depends=[gtools]; }; RankResponse = derive2 { name="RankResponse"; version="3.1.1"; sha256="04s588zbxcjgvpmbb2x46bbf5l15xm7pwiaxjgc1kn1pn6g1080c"; depends=[]; }; - Rankcluster = derive2 { name="Rankcluster"; version="0.94.1"; sha256="1zc6cqbifs3qhd64dm4991sj1i8mxkdm5z797c4816j4hq7z3nn9"; depends=[Rcpp RcppEigen]; }; - RankingProject = derive2 { name="RankingProject"; version="0.1.1"; sha256="1n1282pym7q2b1bh18wlkmk9f0simzq149h7hacc23vyqzgkjs84"; depends=[]; }; + Rankcluster = derive2 { name="Rankcluster"; version="0.94.2"; sha256="1wm7vbv2a4py9yjpcqrzcpfig18n02ip4qkqi62rw32abdlmz6sx"; depends=[Rcpp RcppEigen]; }; + RankingProject = derive2 { name="RankingProject"; version="0.2.0"; sha256="1y2sydppi7y7j9c7r6xcqfm4v9z646w48pnksf11da8lq2nczww8"; depends=[]; }; RapidPolygonLookup = derive2 { name="RapidPolygonLookup"; version="0.1.1"; sha256="0h4snn3haa4a5rkafg98419by4nnz219wsm3y0dqgm4hw4bvha0g"; depends=[PBSmapping RANN RgoogleMaps sp]; }; Rarity = derive2 { name="Rarity"; version="1.3-6"; sha256="1m742qrgc0c5vda9sb2q5n3ghmqnlnfhr1cfpxfs7s5ic707gmlb"; depends=[]; }; RaschSampler = derive2 { name="RaschSampler"; version="0.8-8"; sha256="0y7dkgv1cy6r1mbmyqm27qwl10rl12g1svpx9jkzq5hq0hnm2xhw"; depends=[]; }; Rata = derive2 { name="Rata"; version="0.0.2"; sha256="1s7am08691lil5hbd8jpa5wnbvr0qqf0gkxczpm6yvizbjpx16qx"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2 Rirt]; }; - RateDistortion = derive2 { name="RateDistortion"; version="1.01"; sha256="1micjlbir1v5ar51g1x7bgkqw9m8217qi82ii6ysgjkhwdvpm075"; depends=[]; }; RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.2.2"; sha256="15xkfjp0bkx9wjp8y27vs0iq2ir4qxjdl8405ix59sjb6lkvv3l2"; depends=[ggplot2 pROC]; }; RationalExp = derive2 { name="RationalExp"; version="0.2.2"; sha256="0a51sfps3sfb71m93jdsmbvj6kafbyfrq790ix238j570f5xafpg"; depends=[snowfall]; }; Rbeast = derive2 { name="Rbeast"; version="0.2.2"; sha256="12i6jm7x1hwkj6skva9sli02rm4krzb2gmzny68d9cjhdcan5baq"; depends=[]; }; @@ -3664,19 +3674,17 @@ in with self; { Rcereal = derive2 { name="Rcereal"; version="1.2.1"; sha256="0nl4p0wqpni16z62610sqcxsz1x6kannl2s1zakpmjkk80pyxlk6"; depends=[]; }; RcextTools = derive2 { name="RcextTools"; version="0.1.1"; sha256="1rrij4ryspff9mn1c3jlzjprnipak7nzlb488pk0ci0awaccp5ga"; depends=[data_table igraph sqldf visNetwork]; }; Rcgmin = derive2 { name="Rcgmin"; version="2013-2.21"; sha256="02igq7bdlxwa7ysfiyvqfhcvgm866lrp2z3060z5lmnp6afa0958"; depends=[numDeriv]; }; - RchivalTag = derive2 { name="RchivalTag"; version="0.0.7"; sha256="0i25rj3f54km2gdr8izgvqdbdbcq4nikywn5narm7sg79fv43pd4"; depends=[mapdata maps maptools ncdf4 oceanmap PBSmapping plyr raster rgeos sp]; }; - Rchoice = derive2 { name="Rchoice"; version="0.3-1.1"; sha256="0nmbb6wfgz164fncljnsr11j2w1hi235hysxn1p2mgc6l301rqhm"; depends=[Formula maxLik msm plm plotrix]; }; - RclusTool = derive2 { name="RclusTool"; version="0.91.2"; sha256="07d295fyiv0f19q75cppyqrac7fxlh2yx85nlmarkc6p3072jyrq"; depends=[class cluster conclust corrplot e1071 factoextra FactoMineR ggplot2 jpeg MASS mclust mda mmand nnet png randomForest reshape sp stringi stringr tcltk2 tkrplot]; }; + RclusTool = derive2 { name="RclusTool"; version="0.91.3"; sha256="0f6v2p6dg3fq3vzys6hgwmmgyrxfj2kb4wpbywd7f9p5yd9cfd88"; depends=[class cluster conclust corrplot e1071 factoextra FactoMineR ggplot2 jpeg MASS mclust mda mmand nnet png randomForest reshape sp stringi stringr tcltk2 tkrplot]; }; Rcmdr = derive2 { name="Rcmdr"; version="2.6-2"; sha256="1fv4qx4w9x3gi64vba9qdkp6kghl83z5q7mmdjx7068n484kyhm1"; depends=[abind car effects lme4 RcmdrMisc relimp tcltk2]; }; RcmdrMisc = derive2 { name="RcmdrMisc"; version="2.7-0"; sha256="08k4x957x08cmhad1r5w502zan13gmcfap16wjfb92b4v3f6dzqy"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.1"; sha256="1sdc8ibggz8wpn77g7hddyl7lg86dbyw8qax63p6cqx1pfhb4rra"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr rqubic s4vd superbiclust viridis]; }; RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; }; RcmdrPlugin_EACSPIR = derive2 { name="RcmdrPlugin.EACSPIR"; version="0.2-2"; sha256="10r6rb0fwlilcnqxa38zh7yxc54x1a0by5x4f6gzdn9zs7aj5l1r"; depends=[abind ez nortest R2HTML Rcmdr RcmdrMisc reshape]; }; RcmdrPlugin_EBM = derive2 { name="RcmdrPlugin.EBM"; version="1.0-10"; sha256="02zips1jbfn7cshjlrm1gr632px2zxlys8i0f1nrf1gifl44v1qw"; depends=[abind epiR Rcmdr]; }; - RcmdrPlugin_EZR = derive2 { name="RcmdrPlugin.EZR"; version="1.41"; sha256="0h84rr7scqpds1z0mbmsrhxppdh9rxykc5chvzvniab9hz2h7p05"; depends=[Rcmdr readstata13]; }; + RcmdrPlugin_EZR = derive2 { name="RcmdrPlugin.EZR"; version="1.41.1"; sha256="0nfb2fdhag4593rmbfi4s4lbsbx76yizfn06rrch4q0sshhrg06m"; depends=[Rcmdr readstata13]; }; RcmdrPlugin_EcoVirtual = derive2 { name="RcmdrPlugin.EcoVirtual"; version="1.0"; sha256="0q879wnrmgbaddv883q9zdnp0i7kjcgn8cffv7lp8nrsqil6l7mc"; depends=[EcoVirtual Rcmdr]; }; RcmdrPlugin_Export = derive2 { name="RcmdrPlugin.Export"; version="0.3-1"; sha256="17fn3si6b6h20c52k1k6fv9mslw3f9v0x1kxixzcvq54scdx0sk0"; depends=[Hmisc Rcmdr xtable]; }; - RcmdrPlugin_FactoMineR = derive2 { name="RcmdrPlugin.FactoMineR"; version="1.6-0"; sha256="07k9x3mdaqzk1503wjsha9f8bxzw1074i9g7sa16yqz5lwky4lr7"; depends=[FactoMineR Rcmdr]; }; + RcmdrPlugin_FactoMineR = derive2 { name="RcmdrPlugin.FactoMineR"; version="1.7"; sha256="1145rpzhq219sl0j2bg5xa0ihq13lmr7ahcn3db4a8mqlz2fp8zy"; depends=[FactoMineR Rcmdr]; }; RcmdrPlugin_FuzzyClust = derive2 { name="RcmdrPlugin.FuzzyClust"; version="1.1"; sha256="1lg6k3h4n45s6wjkl3ycwfngfr2i6mkhirifhbazsvv297bg0iba"; depends=[clue doParallel foreach ggplot2 iterators MASS Rcmdr reshape2 tcltk2 tkrplot]; }; RcmdrPlugin_GWRM = derive2 { name="RcmdrPlugin.GWRM"; version="1.0.2"; sha256="01q4k9s815pgd5cavm6nyxy5npmpxryari9v6wys4n5cjpn5g6xq"; depends=[GWRM Rcmdr RcmdrMisc]; }; RcmdrPlugin_HH = derive2 { name="RcmdrPlugin.HH"; version="1.1-47"; sha256="1bba11izs1jhjsyb0d45c34gcihapk231qbiabcxf8x93sdmg6ga"; depends=[HH lattice mgcv Rcmdr]; }; @@ -3711,14 +3719,14 @@ in with self; { RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.10"; sha256="02rs5xdj6g57frndc87fly0ans16584j4d0rfpy1h72655cz66ab"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; }; Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; }; Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; }; - Rcpp = derive2 { name="Rcpp"; version="1.0.3"; sha256="03h3zyjq948y0hrrs95lfk4zgx6wfrg64hjlrfrzf5na7bfh0d9b"; depends=[]; }; + Rcpp = derive2 { name="Rcpp"; version="1.0.4"; sha256="1m80pdhzi2p82db5xkbwc2m3fzv6df59955yj03nlq40fj7zx4nr"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0"; sha256="1x6n1z7kizagr5ymvbwqb7nyn3lca4d4m0ks33zhcn9gay6g0fac"; depends=[]; }; - RcppAPT = derive2 { name="RcppAPT"; version="0.0.5"; sha256="0188sabgfmgh83yr3hmqpg5cmhllfkxzbxxchqr2r2fmj6x0ib1a"; depends=[Rcpp]; }; - RcppAlgos = derive2 { name="RcppAlgos"; version="2.3.5"; sha256="0ir4m5lzph27c2cwxj32fds4ghx6n3mamxyakkpgr2arbd3sa3zq"; depends=[gmp Rcpp RcppThread]; }; - RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.14"; sha256="1wiigx5g5788j6lyc3f6bs1rsvc4alyc3052g35hxl1giinxmhn4"; depends=[Rcpp]; }; - RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.9.800.4.0"; sha256="1csh54v4d0ccwmk4bqj4rca1d5rqpafvb4459x3q6k9sys0charx"; depends=[Rcpp]; }; + RcppAPT = derive2 { name="RcppAPT"; version="0.0.6"; sha256="0gkvs276hwa4yzd1bwf12p83cq2i1k021nq4y6ll1gcrj41mkdns"; depends=[Rcpp]; }; + RcppAlgos = derive2 { name="RcppAlgos"; version="2.3.6"; sha256="05lwip6d48qhk4gph3lgwnix55sw24b12a4g1jd4h0lxgkhak4bm"; depends=[gmp Rcpp RcppThread]; }; + RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.16"; sha256="0bfa35lp6vc4b0h3ymvdx50br233q8vvyjml34ngi81rj0imz3fr"; depends=[Rcpp]; }; + RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.9.850.1.0"; sha256="0q9clhmbwwph47hrhx5827m7njrcl2klihyqbkf0ihwlbqrjijwz"; depends=[Rcpp]; }; RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; - RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.6"; sha256="1bkrzdcm18z7qfkcfq5yc4s8z6a43y6cfsa09k6j9ni9bl2pd6hf"; depends=[Rcpp]; }; + RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.7"; sha256="0q4vj0dh04m2v2p8x0wd78hbfxzj4zi1nmp52ndwnirhs6zfny4l"; depends=[Rcpp]; }; RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.10"; sha256="175bn75akwgz3vcp0n59kiqqz7q9cwkvih241nj8v810cp4gpmkp"; depends=[Rcpp]; }; RcppCWB = derive2 { name="RcppCWB"; version="0.2.8"; sha256="15iiv5kwh7c3pprpyyvjnbj80x9245f3zmfiy41w661n3cnka68p"; depends=[Rcpp]; }; RcppClassic = derive2 { name="RcppClassic"; version="0.9.12"; sha256="0v9v34i1c4dkplavdl14kz1k2rnk4hsaiyv6rkc9403z9isvzzr0"; depends=[Rcpp]; }; @@ -3729,7 +3737,7 @@ in with self; { RcppDynProg = derive2 { name="RcppDynProg"; version="0.1.3"; sha256="099hbm355d30rwxqjd7j4dfw678551dc5v4y7yy6q4xxyf527lbs"; depends=[Rcpp RcppArmadillo wrapr]; }; RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.7.0"; sha256="1b78qcjim0n9klgkr82n794d6bj9r9f33g0kcsszsns2hir65sk2"; depends=[Matrix Rcpp]; }; RcppEigenAD = derive2 { name="RcppEigenAD"; version="1.0.0"; sha256="18zm9hsfqwiicxsdm87ix3qc261ljxxn2s736p6aayx82b6vwkz6"; depends=[BH functional memoise Rcpp RcppEigen Rdpack readr]; }; - RcppEnsmallen = derive2 { name="RcppEnsmallen"; version="0.2.11.1.1"; sha256="18m2ij98zsp897w9dwr8pjkrmqkjlgsxwiwa939i3cj75sjj3snh"; depends=[Rcpp RcppArmadillo]; }; + RcppEnsmallen = derive2 { name="RcppEnsmallen"; version="0.2.11.3.1"; sha256="03868qkz8miayjbgwlccrwqiy4yv7f3gmp89i4c96xs7q3ijwynn"; depends=[Rcpp RcppArmadillo]; }; RcppExamples = derive2 { name="RcppExamples"; version="0.1.9"; sha256="0568zipgjxgmx086mlfpp5n7v8kf50gwrylvhl1bgvzb2vvr9dhj"; depends=[Rcpp]; }; RcppFaddeeva = derive2 { name="RcppFaddeeva"; version="0.1.0"; sha256="1rah18sdfmbcxy83i7vc9scrwyr34kn9xljkv9pa31js68gn2jrl"; depends=[knitr Rcpp]; }; RcppGSL = derive2 { name="RcppGSL"; version="0.3.7"; sha256="0cnw2k7cfqrm79r6j283aybflxig80x4n4rjkfp2317wf10mrsa5"; depends=[Rcpp]; }; @@ -3743,12 +3751,13 @@ in with self; { RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.3"; sha256="0ffdw5ckkax8j87q0ykjhyp45l7gvxjppdi73kc4r5qxvijll2g3"; depends=[BH Rcpp]; }; RcppNLoptExample = derive2 { name="RcppNLoptExample"; version="0.0.1"; sha256="1fml6hpa12q0lgg5fg6fi9lz6mckwh345pbh95mld2qagzvmg01n"; depends=[nloptr Rcpp]; }; RcppNumerical = derive2 { name="RcppNumerical"; version="0.4-0"; sha256="1a92fql6mijhnr1kxkcxwivf95pk9lhgmhzkshs51h0ybfv5krik"; depends=[Rcpp RcppEigen]; }; - RcppParallel = derive2 { name="RcppParallel"; version="4.4.4"; sha256="0p13f2mywjr7gmskf8ri4y8p5yr1bvr4xrpw2w11vdvafwz1vcia"; depends=[]; }; - RcppProgress = derive2 { name="RcppProgress"; version="0.4.1"; sha256="0yk01hfv961zyp569682k9igvhnwqyg5j0n5fm63sxigj82l2xhi"; depends=[]; }; + RcppParallel = derive2 { name="RcppParallel"; version="5.0.0"; sha256="1mhd6vp47xmfw533h0pkvydv96m57fspvd85g8m7iqb5rcxvhhdb"; depends=[]; }; + RcppProgress = derive2 { name="RcppProgress"; version="0.4.2"; sha256="0j2b37gwjpgmrnr00srdzm751hzlpsjb54ph63xxmcdfnwhlnqmi"; depends=[]; }; RcppQuantuccia = derive2 { name="RcppQuantuccia"; version="0.0.3"; sha256="0cj95y8jcjm33d65y42f5ijw775kq3mh2p0659mp3i3r9fvaishk"; depends=[BH Rcpp]; }; RcppRedis = derive2 { name="RcppRedis"; version="0.1.10"; sha256="07cxp0xdrg1bydlvgryf8jivlqicd880xdfdz6grhqqdxwss8qv1"; depends=[BH RApiSerialize Rcpp]; }; RcppRoll = derive2 { name="RcppRoll"; version="0.3.0"; sha256="0srzfhzkk42kzrdjnhbb37946jp1p688rgysy6k3i2is8jb21zyb"; depends=[Rcpp]; }; RcppSMC = derive2 { name="RcppSMC"; version="0.2.1"; sha256="0k2k1pj05i6hf7gpar3r4mbv9cs04bd4v657saq9vhy30300vg49"; depends=[Rcpp RcppArmadillo]; }; + RcppSimdJson = derive2 { name="RcppSimdJson"; version="0.0.3"; sha256="1qs9gwiy3zmw4pm23rg09k1rfrml4wg8pykg1hdyd7khl1293yw4"; depends=[Rcpp]; }; RcppStreams = derive2 { name="RcppStreams"; version="0.1.3"; sha256="06il7q3afaws57m0fxf04f2p5dvs23l1f7gl78pxwzclacdy3839"; depends=[BH Rcpp]; }; RcppTN = derive2 { name="RcppTN"; version="0.2-2"; sha256="0m2wc5n1fzxv56s4gqqnygb24dbadgrpgjm4bs4hr6qazgjapymf"; depends=[Rcpp]; }; RcppTOML = derive2 { name="RcppTOML"; version="0.1.6"; sha256="1nyv4ynryh8vcrzyq01nzj13is40bjhxazlj9ilapyjdv9h5w3bs"; depends=[Rcpp]; }; @@ -3759,7 +3768,7 @@ in with self; { RcppZiggurat = derive2 { name="RcppZiggurat"; version="0.1.5"; sha256="0zmr3nvm5j0fpwxk3x9kxpwqbr66ldfvd10zy8xlgjbslz9myvfv"; depends=[Rcpp RcppGSL]; }; Rcrawler = derive2 { name="Rcrawler"; version="0.1.9-1"; sha256="1m6b1h72h8qjqcg3lzw6im6lpnkxhjg65g9fdjjqay6vy52ynznj"; depends=[callr data_table doParallel foreach httr jsonlite selectr webdriver xml2]; }; Rcriticor = derive2 { name="Rcriticor"; version="2.0"; sha256="1cnmmcdp2g3syrlld1pm7101cbzxh02cpvqvgsj7mp6zxm2k5plv"; depends=[]; }; - Rcsdp = derive2 { name="Rcsdp"; version="0.1.55"; sha256="1sskjf2vv5alnwirz676d8yphzk2a69wkghhkpxb8my1rjlfdgaw"; depends=[]; }; + Rcsdp = derive2 { name="Rcsdp"; version="0.1.57.1"; sha256="1dya0c0fcwr6ydcamz8m06nnq0b80vg7b22dg5jv3qi1n1fgp4lv"; depends=[]; }; Rcssplot = derive2 { name="Rcssplot"; version="1.0.0"; sha256="0hnzwjwk9zh4zbzy8sa0z6amikvpd9k1p1abd38khr8q8k1k8jiv"; depends=[]; }; Rd2md = derive2 { name="Rd2md"; version="0.0.2"; sha256="07j1nnsk5nyl8kvgvh9f684g6bhc01jiq1fcmq2pnpx57jdzfbpi"; depends=[knitr]; }; Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.9"; sha256="029f85visar52002hdpfw5r2zq37kzbr8rgji76nnqi08jk0if4n"; depends=[formatR roxygen2]; }; @@ -3769,18 +3778,18 @@ in with self; { Rdpack = derive2 { name="Rdpack"; version="0.11-1"; sha256="080y15p2hl4jsq91ak2f1y2kx1iqq5c5wzyx3zyhjwp01cahy0jq"; depends=[bibtex gbRd]; }; Rdrools = derive2 { name="Rdrools"; version="1.1.1"; sha256="0awdj1q9ysrhwli16izi0lb6pppqxs1lb6wlv40111q483p41fj7"; depends=[dplyr magrittr purrr Rdroolsjars rJava rlang tibble]; }; Rdroolsjars = derive2 { name="Rdroolsjars"; version="1.0.1"; sha256="1l9bc1bwpj10irr973hzkhr04i1f3g998n8hcl2k2i9kgv1naqmz"; depends=[rJava]; }; - Rdsdp = derive2 { name="Rdsdp"; version="1.0.4-2"; sha256="05bk6yqvhzvyfzga1dz34w68nlwl2dc8bvhh3ghd07a61fsnkg4x"; depends=[]; }; + Rdsdp = derive2 { name="Rdsdp"; version="1.0.5"; sha256="04268fbajm7pgi5mxpghzw0yjwwx1dy9vdi6yhr20q2lmi6xh19w"; depends=[]; }; Rdsm = derive2 { name="Rdsm"; version="2.1.1"; sha256="07fc6c2hv0vvg15va552y54cla1mrqsd75w3zh02vc7yd226l4rj"; depends=[bigmemory]; }; Rdta = derive2 { name="Rdta"; version="1.0.0"; sha256="1zmyh61wrzqwyfjbfcxg41cri7hy9r0jfwnixcvd086y0vxq7fdn"; depends=[MCMCpack mvtnorm Rdpack]; }; Rdtq = derive2 { name="Rdtq"; version="0.1"; sha256="114pyf95nl132014ygn84xi41c2zf1ii2wfgd1acwnnmfzvdw24s"; depends=[Matrix Rcpp]; }; Rduino = derive2 { name="Rduino"; version="0.1"; sha256="0r1yy3a2n8a4niasfjn77gv130a062i802r7xhbg0abljv5m6ra5"; depends=[serial]; }; ReCiPa = derive2 { name="ReCiPa"; version="3.0"; sha256="019vlvgxnqqlwghxygfqggzp2b4x2pqzdrbhaa703zdhm58k0n1g"; depends=[]; }; - ReIns = derive2 { name="ReIns"; version="1.0.8"; sha256="1piwmjav32cwki3jhxzv3ld59gddlm5y5dwc8smwk5gzpfypdzm6"; depends=[doParallel foreach Rcpp survival]; }; + ReIns = derive2 { name="ReIns"; version="1.0.9"; sha256="1lvc39l42zwyrsr1s5zlj34rmi1i6pvp80z5jgkql0hr9i78fmq9"; depends=[doParallel foreach Rcpp survival]; }; ReacTran = derive2 { name="ReacTran"; version="1.4.3.1"; sha256="05c9jfvj134gy3by7m3r1fbar0m39vaydr7d2py9cakzs44fqfpj"; depends=[deSolve rootSolve shape]; }; RealVAMS = derive2 { name="RealVAMS"; version="0.4-3"; sha256="14jqrqza7bs11y1004wzi3bxkvkdfn43d82l0cyh6py8p37rfz28"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; Rearrangement = derive2 { name="Rearrangement"; version="2.1"; sha256="0q253nj62rl65vjsq6503r80qa2j35wac8lv7ydp9w260p28z923"; depends=[quantreg]; }; Recon = derive2 { name="Recon"; version="0.3.0.0"; sha256="11gag2bl00pcy7ysfycaa58qarh6aigznldkc4kkn2178bl4ii62"; depends=[rootSolve]; }; - RecordLinkage = derive2 { name="RecordLinkage"; version="0.4-11.2"; sha256="1gqf236bpxi0hbhv8bxscv78dwdb3z4x105qfyvzky01aydw5zgn"; depends=[ada data_table DBI e1071 evd ff ffbase ipred nnet rpart RSQLite xtable]; }; + RecordTest = derive2 { name="RecordTest"; version="0.1.2"; sha256="19gxghp8b56gbyv2crjq2bzgaw5m3agd467ihbwkkjqli8cisgip"; depends=[ggplot2]; }; Records = derive2 { name="Records"; version="1.0"; sha256="08y1g2m6bdrvv4rpkhd5v2lh7vprxy9bcx9ahp1f7p062bn2lwji"; depends=[]; }; RedditExtractoR = derive2 { name="RedditExtractoR"; version="2.1.5"; sha256="1b6pp1vdn7jnyl8k828dgkxrx8sy2wyhkrn4rnfavqw4qvhm0mhm"; depends=[dplyr igraph magrittr RJSONIO rlang visNetwork]; }; Redmonder = derive2 { name="Redmonder"; version="0.2.0"; sha256="02qrz1b0g7hdacj2s2bks5gfwnypkbiwlmn0bv7im1zz1swg9cp8"; depends=[]; }; @@ -3790,7 +3799,7 @@ in with self; { RegSDC = derive2 { name="RegSDC"; version="0.3.0"; sha256="17w6qqh2vyh34xrpngqknk0g04sc6q7b77l7m0g8aiy904dsvfcr"; depends=[MASS Matrix SSBtools]; }; RegressionFactory = derive2 { name="RegressionFactory"; version="0.7.2"; sha256="1g23paq42xiiqavikbrflwmr8ikls9z97v1xpgg16pb88svdyayc"; depends=[]; }; RegularizedSCA = derive2 { name="RegularizedSCA"; version="0.5.4"; sha256="1nw6hd9y2n1h3j1fqqkymz13xizv5xrsj93w702kkvkbwyl3yall"; depends=[colorspace ggplot2 gtools lattice mice psych RGCCA]; }; - ReinforcementLearning = derive2 { name="ReinforcementLearning"; version="1.0.4"; sha256="14xacbi0bfnb9yn5sn1zksc4av08qrncn0glmbfc9x9i88rfz5m2"; depends=[data_table ggplot2 hash]; }; + ReinforcementLearning = derive2 { name="ReinforcementLearning"; version="1.0.5"; sha256="0zk1hy4p5adyjm1430a8ad5acn9qaax1si8qqfxqayfmlj954sj9"; depends=[data_table ggplot2 hash]; }; RelValAnalysis = derive2 { name="RelValAnalysis"; version="1.0"; sha256="1jl1gfj44gfkmc1yp6g5wwn4miydwpvxwrg76rnkv9454zrc5pvp"; depends=[zoo]; }; Relatedness = derive2 { name="Relatedness"; version="2.0"; sha256="1aidklwk8q2wdfsmhlbd3vzq9kzsyh4wn1g28biyb6lq7iwq1hl4"; depends=[]; }; Relexon = derive2 { name="Relexon"; version="0.2.1"; sha256="1shq1v3y1jhrnkl3fdnrwv23zrh8dx0k7zwqcvn5dxpd3vzsxqxg"; depends=[readr]; }; @@ -3798,7 +3807,7 @@ in with self; { RelimpPCR = derive2 { name="RelimpPCR"; version="0.2.4"; sha256="0svfyh313wawzqx9hfb4cg0wn2ir6nd769z1k3dckdsb8d7xkh3q"; depends=[caret ggplot2 relaimpo reshape2 Rmisc]; }; Renext = derive2 { name="Renext"; version="3.1-0"; sha256="074djs4y71667aylpgh514pzijr90rgpzm4w5ayq9cgaqz22m3am"; depends=[evd numDeriv]; }; RenextGUI = derive2 { name="RenextGUI"; version="1.4-0"; sha256="0jfg4a85j06wxk8vq2q6j8md2kcss0s7k71218gfh9vybk7hl4h6"; depends=[gWidgets gWidgetstcltk R2HTML Renext]; }; - Renvlp = derive2 { name="Renvlp"; version="2.7"; sha256="1h65m1av2z5zj5mmhrf0vspnbws2dp6s6ihyrvcrm24ipcnkvinz"; depends=[Rsolnp]; }; + Renvlp = derive2 { name="Renvlp"; version="2.8"; sha256="1avpy3hz693qj4d64mg6085hd0w6igwl1gs63jcda08d10zy6hg6"; depends=[Rsolnp]; }; ReorderCluster = derive2 { name="ReorderCluster"; version="1.0"; sha256="0ss750frzvj0bm1w7zblmcsjpszhnbffwlkaw31sm003lbx9hy58"; depends=[gplots Rcpp]; }; RepaymentPlan = derive2 { name="RepaymentPlan"; version="0.1.0"; sha256="1fd4n24bd5s2kqmls7mmsidblaf8nzm97kz52mfsb6i6fci0pgah"; depends=[]; }; RepeatedHighDim = derive2 { name="RepeatedHighDim"; version="2.0.0"; sha256="1n9w4jb25pm0mmsahlfhkp9jmhgp5b21l1g85gm2wbxqkjsg7g0g"; depends=[MASS nlme]; }; @@ -3808,10 +3817,11 @@ in with self; { RepoGenerator = derive2 { name="RepoGenerator"; version="0.0.1"; sha256="0d6s2sqyycaqrg32xdkp3pr5i7qmvwrfrjcd7f94a9y3lz4bz5b5"; depends=[git2r httr rmarkdown rstudioapi]; }; ResistorArray = derive2 { name="ResistorArray"; version="1.0-32"; sha256="0zqnl0bbqrj5hn5ywhlqyrlz5ryql88qahlgs9989v4rljcxxlam"; depends=[]; }; ResourceSelection = derive2 { name="ResourceSelection"; version="0.3-5"; sha256="1vg5fkjfwkganxf0ji70pkp071841hjgr5sjxlaky8mx7n0cy80x"; depends=[MASS Matrix pbapply]; }; + RestRserve = derive2 { name="RestRserve"; version="0.2.0.2"; sha256="1va9rq0s7f3m1nb2r5zxdnvbw2i83r7q4aqkvi1wk3lyavi2j51f"; depends=[checkmate jsonlite mime R6 Rcpp Rserve uuid]; }; RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; }; Rexperigen = derive2 { name="Rexperigen"; version="0.2.1"; sha256="158ksnd1gvzq7ii0ys2v0wrfnr001hni0i8m77p1fn1arixgmqdw"; depends=[digest jsonlite RCurl]; }; Rfacebook = derive2 { name="Rfacebook"; version="0.6.15"; sha256="0hp2mbm0hnyasizszvh5x9hv7z2q633zck1a1gvk36nbxb1shx7c"; depends=[httpuv httr rjson]; }; - Rfast = derive2 { name="Rfast"; version="1.9.8"; sha256="0y7r3svw4irbyhq42ncpldbf7mkrh9wcx1k0rjg41q04mj3720ch"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; + Rfast = derive2 { name="Rfast"; version="1.9.9"; sha256="18m8xhg24kygwhq7avdp1hibilicb5wppi2wdmc36fkqljc274y0"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; Rfast2 = derive2 { name="Rfast2"; version="0.0.5"; sha256="07w0ypwy19cqf4h94pzh0y8fmq5ibr048qzarrs1qzlnk2hx7k4c"; depends=[Rcpp RcppArmadillo Rfast]; }; Rfit = derive2 { name="Rfit"; version="0.24.2"; sha256="1b3pza2xdpifvrcqbdp5r2wy82ws1844bnpna01hqj65xbw2iix8"; depends=[]; }; Rfolding = derive2 { name="Rfolding"; version="1.0"; sha256="15lf73zxr1slin9faj9k0z8qkb1g9nb7h080nfv99gsi2ks68ssg"; depends=[]; }; @@ -3820,8 +3830,7 @@ in with self; { Rgb = derive2 { name="Rgb"; version="1.6.1"; sha256="0qs3dlv4g45dqphqjm23ky3w6rxh8ff2q6b17kvf57skyf1b1yn8"; depends=[]; }; Rgbp = derive2 { name="Rgbp"; version="1.1.4"; sha256="1y51sms321sbrl3rgzp5hq4y5mqkrjxsyrq75gkcbwfvlakjcfrg"; depends=[mnormt sn]; }; Rglpk = derive2 { name="Rglpk"; version="0.6-4"; sha256="19mzpyimzq9zqnbi05j79b2di3nzaln8swggs9p8sqdr60qvr3d2"; depends=[slam]; }; - Rgnuplot = derive2 { name="Rgnuplot"; version="1.0.3"; sha256="0mwpq6ibfv014fgdfsh3wf8yy82nzva6cgb3zifn3k9lnr3h2fj7"; depends=[]; }; - RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.5.2"; sha256="1y2dinxmzx6mg6ynpk2q7f4k4rxjm66my185gafdcvpc4rl7svs7"; depends=[png]; }; + RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.5.3"; sha256="02v8k0bw70q4qwx4lcdy8p25q7n3ql2ll46lfpqllxa1p26svmfi"; depends=[png sp]; }; Rhpc = derive2 { name="Rhpc"; version="0.19-276"; sha256="1wbdkqmaq3rdj5r9w0mddkcyiabyd9r26jp3i7i4w055mq2r1gs1"; depends=[]; }; RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.20-17"; sha256="0iwc06blr5sx7rylwczi2jrha8sk8qs0jklflwpidl0zj1jxdggp"; depends=[]; }; Ricetl = derive2 { name="Ricetl"; version="0.2.5.1"; sha256="1d7229ylnxgh2rvarwga229378ja79l978zjabf3sph4cqc1b965"; depends=[devtools gWidgets gWidgetsRGtk2 plyr readr readxl stringr tidyverse writexl]; }; @@ -3830,6 +3839,7 @@ in with self; { Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; }; RiemBase = derive2 { name="RiemBase"; version="0.2.3"; sha256="08dwnzjy7fhipvqb7p4kbhcfhrnz9i025czci6d0a9nnyscqcgfv"; depends=[pracma Rcpp RcppArmadillo Rdpack]; }; RiemBaseExt = derive2 { name="RiemBaseExt"; version="0.1.1"; sha256="17899bsb6s4jaql71hsq5abcnf1ybji5236zwh25apc6k7br14fc"; depends=[cluster dbscan energy fastcluster kernlab Rcpp RcppArmadillo Rdpack RiemBase]; }; + RiemStiefel = derive2 { name="RiemStiefel"; version="0.1.0"; sha256="1yiz8lbvrlgln1dlf8z03f298isr8cjlcbrh62vb7ppaxjlvlyzx"; depends=[Rcpp RcppArmadillo Rdpack RiemBase RiemBaseExt]; }; Riex = derive2 { name="Riex"; version="1.0.1"; sha256="1jri01s08g819bvw0bgd5z5iaf9rlikkqq993lm0455k909wm34v"; depends=[dplyr ggplot2 httr purrr quantmod rjson stringr tibble tidyr tidyverse TTR urltools xts zoo]; }; Rilostat = derive2 { name="Rilostat"; version="1.0.1"; sha256="0k8x2z3vxfwbynn22wpkfbc1i237bl61dh612nhw19c7v48lhdgg"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; Rinstapkg = derive2 { name="Rinstapkg"; version="0.1.0"; sha256="0fvj4jc00g5b8cc4mrsjj72fdcdmvlky05s2ca0g2gndrjs6vxic"; depends=[digest dplyr httr jsonlite lubridate purrr readr rlang uuid]; }; @@ -3844,7 +3854,7 @@ in with self; { RkMetrics = derive2 { name="RkMetrics"; version="1.3"; sha256="1k6vnr1r4h69iznib638z45gd0f8wc4g4h0ji9f0017883g77li1"; depends=[]; }; Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; }; Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; }; - Rlabkey = derive2 { name="Rlabkey"; version="2.3.3"; sha256="14jiksm93c8qn9x0slc5v1f5d1fxcyg2fdxd82czdgp8j2ijwh55"; depends=[httr jsonlite Rcpp]; }; + Rlabkey = derive2 { name="Rlabkey"; version="2.3.4"; sha256="08f220a0blfvzn5qzvsydxdgbx44jlch5avaavlqixzizzwfrfhs"; depends=[httr jsonlite Rcpp]; }; Rlda = derive2 { name="Rlda"; version="0.2.6"; sha256="0i8n01h9072q339p1kiqhcpwphw0d2x6bsszbhgfqc2b160dk2bl"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; }; Rlgt = derive2 { name="Rlgt"; version="0.1-3"; sha256="0g610v5rch5s31gc7dy9zx4mcgsdhn82y1pmr2rs14qma0v7x515"; depends=[BH forecast Rcpp RcppEigen rstan rstantools sn StanHeaders]; }; Rlibeemd = derive2 { name="Rlibeemd"; version="1.4.1"; sha256="06bb939awawpwn4g63b9jzq5b658lsznzy272zl0fy19x62c6bwr"; depends=[Rcpp]; }; @@ -3863,7 +3873,6 @@ in with self; { Rmpi = derive2 { name="Rmpi"; version="0.6-9"; sha256="1rhycla98hxgnnxlxxldr1x51djak7c2jjvlrv3jcsvgwp1ymqdj"; depends=[]; }; Rmst = derive2 { name="Rmst"; version="0.0.3"; sha256="1fykpii17k460qlsjhhh5vag02lhkyk5l3zjmg8hifqp0cjhz2fl"; depends=[ggplot2 Rata reshape2 Rirt]; }; RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.4"; sha256="1k1gnkghap878fck0bbz9mm0fr4cli6lh1d11r0cf47fvl6cc4gr"; depends=[]; }; - Rnets = derive2 { name="Rnets"; version="1.2.1"; sha256="08441hhmf1i97z5xb9pq651y6hwr2yraiyg1ns7qkxm2svz3kwxs"; depends=[data_table glasso ICSNP igraph rlang stringr]; }; Rnmr1D = derive2 { name="Rnmr1D"; version="1.2.5"; sha256="0z97pmkksma225s948r0myd4638cy8vl1x2244w1r6n0cybymnd9"; depends=[base64enc doParallel foreach ggplot2 igraph impute MASS MassSpecWavelet Matrix plotly plyr ptw Rcpp signal speaq XML]; }; Rnumerai = derive2 { name="Rnumerai"; version="0.3"; sha256="0zvfp9zp73gm6pflf9bx1xk1s45xwwvcd56cbris08d2zfj3b3nl"; depends=[httr lubridate]; }; RobAStBase = derive2 { name="RobAStBase"; version="1.2.1"; sha256="0dn93bcyz9kxbj38sc1wisfa6v0666v9gk6y3zq0ihjkkhkmdwq3"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; }; @@ -3875,10 +3884,10 @@ in with self; { RobPer = derive2 { name="RobPer"; version="1.2.2"; sha256="0631qfpz61606r50vzn7b3h7arfwxcs8j13q1hg779qx60kwrliy"; depends=[BB quantreg rgenoud robustbase]; }; RobRSVD = derive2 { name="RobRSVD"; version="1.0"; sha256="07z5fw8j5lq7nyxgkvb9i4iwb5inddz2ib4m2bjx6q4c1ricpqz9"; depends=[]; }; RobRex = derive2 { name="RobRex"; version="1.2.0"; sha256="1npgbdvdzb0p0w77fsngrwg968y621p3lx8qw69ns8qgxjkismqp"; depends=[distr RandVar RobAStBase ROptRegTS]; }; - RobStatTM = derive2 { name="RobStatTM"; version="1.0.1"; sha256="05bhly32gi5w5n4w7c276dfvyj9ax1kfiwlj2s7x7l6r8yxkjp25"; depends=[DEoptimR DT fit_models ggplot2 gridExtra PerformanceAnalytics pyinit robust robustbase rrcov shiny shinyjs xts]; }; + RobStatTM = derive2 { name="RobStatTM"; version="1.0.2"; sha256="14fnz01n0dd0qdlnd9vcqqj0xzfn8av8fvsy2ay0lk22ma3jw83v"; depends=[DEoptimR DT fit_models ggplot2 gridExtra PerformanceAnalytics pyinit robustbase rrcov shiny shinyjs xts]; }; RobinHood = derive2 { name="RobinHood"; version="1.2.1"; sha256="0lq06m7zdny5230afssr8cjx7rlfnhmrzi02972dqcc6w9p62270"; depends=[dplyr httr jsonlite lubridate magrittr profvis uuid]; }; Robocoap = derive2 { name="Robocoap"; version="0.1-1"; sha256="0aj6iv85a1zfaknjhrzf6lnf0qn726dvnj4dywg9nii1kkqrkq2w"; depends=[data_table igraph markovchain tm]; }; - RobustAFT = derive2 { name="RobustAFT"; version="1.4-4"; sha256="17qjfpagz0wpl8hbyksnag51nj6b9arl9mk5a56avykd2nii95kd"; depends=[robustbase survival]; }; + RobustAFT = derive2 { name="RobustAFT"; version="1.4-5"; sha256="1i119qqlavfj7k0srb8fbbyy2nhsjv9rgrni854liizr9m51cgac"; depends=[robustbase survival]; }; RobustCalibration = derive2 { name="RobustCalibration"; version="0.5.1"; sha256="0wsnvryvrl37acljrda2dm1d8aynqiy66yd2i857m035whixfpqa"; depends=[Rcpp RcppEigen RobustGaSP]; }; RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.7"; sha256="1zjil79a5zwi51bsrifplj2yyxpqg4v9471bsclwzyzll24c46vk"; depends=[nloptr Rcpp RcppEigen]; }; RobustRankAggreg = derive2 { name="RobustRankAggreg"; version="1.1"; sha256="1pslqyr1lji1zvcrwyax4zg2s81p1jnhfldz8mdfhsp5y7v8iar3"; depends=[]; }; @@ -3887,7 +3896,8 @@ in with self; { RonFHIR = derive2 { name="RonFHIR"; version="0.4.0"; sha256="1ajpgpp300m0zzqzzwsn8sfy8x751hrr8py9n9xvzjmkgyrh4hhw"; depends=[httr jsonlite R6 stringr]; }; Rook = derive2 { name="Rook"; version="1.1-1"; sha256="00s9a0kr9rwxvlq433daxjk4ji8m0w60hjdprf502msw9kxfrx00"; depends=[brew]; }; RootsExtremaInflections = derive2 { name="RootsExtremaInflections"; version="1.2.1"; sha256="0qd6cmzp8fkb75ac79xbh4032vqwax7nk7d6yykpdbn0bnk2kvdi"; depends=[doParallel foreach inflection iterators]; }; - Ropj = derive2 { name="Ropj"; version="0.2-2"; sha256="1jdn4m5xfnm7z7pjchqsy1zhh6kgbi8fw2jl8hw1pckjfyzhlwhw"; depends=[Rcpp]; }; + Ropj = derive2 { name="Ropj"; version="0.3"; sha256="01yzlzab7pldyxqb1g8fmc6iig2d4y887bfxqjxckvd4f76vlkqs"; depends=[Rcpp]; }; + Rosenbrock = derive2 { name="Rosenbrock"; version="0.1.0"; sha256="0qfdyr66g244jvbnssbnj2b2ng740dr4qmillpnwl4h2hh811syv"; depends=[MASS]; }; Rothermel = derive2 { name="Rothermel"; version="1.2"; sha256="0zrz2ck3q0vg0wpa4528rjlrfnvlyiy0x1gr5z1aax1by7mdj82s"; depends=[ftsa GA]; }; RoughSetKnowledgeReduction = derive2 { name="RoughSetKnowledgeReduction"; version="0.1"; sha256="0zn6y2rp78vay9zwijpzhjpyq1gmcsa13m9fcsxkd1p2c8g5rbmf"; depends=[]; }; RoughSets = derive2 { name="RoughSets"; version="1.3-7"; sha256="0g6nx0cak6619hxv1fq3b30xv0bdwxb776qkdj6ihig6nhkm2hkj"; depends=[Rcpp]; }; @@ -3903,12 +3913,12 @@ in with self; { Rpoppler = derive2 { name="Rpoppler"; version="0.1-0"; sha256="19nvv45ahp0c241p1xzlq0sq5qarqg66jw5f1anhqnfi2hi91hcm"; depends=[]; }; Rprofet = derive2 { name="Rprofet"; version="2.2.0"; sha256="1s0jkq83vfc9jsggnwm31r366b10n6sri2vzpwxybzpjq3d3w5qr"; depends=[binr ClustOfVar ggplot2 gridExtra plyr sqldf stringr]; }; Rquake = derive2 { name="Rquake"; version="2.4-0"; sha256="14s2mjq9qqxfvlwmq9126h67y5wr7irlc7945pgv1ab9hl1lgmz8"; depends=[GEOmap MBA minpack_lm rgl RPMG RSEIS]; }; - Rquefts = derive2 { name="Rquefts"; version="1.0-5"; sha256="0c3738rn3abmah61kxyys3ab807r7mhcj10shkraq3li6v7aw5kv"; depends=[meteor Rcpp]; }; + Rquefts = derive2 { name="Rquefts"; version="1.0-7"; sha256="1r1b2ga7kfhxsgr2d6ncfyrcpwx1jy0q1h06xajhfpd7i2sk7i84"; depends=[meteor Rcpp]; }; Rramas = derive2 { name="Rramas"; version="0.1-6"; sha256="16aapvz9j81lvi5ryj41bvn3wf51b0gynnzs0jpvva4m3mvzw6an"; depends=[diagram]; }; - Rraven = derive2 { name="Rraven"; version="1.0.8"; sha256="00qlisn7026y0dhgb9ig8liky5k8xrw7app5dj6f8123bi6ligv6"; depends=[NatureSounds pbapply seewave tuneR warbleR]; }; + Rraven = derive2 { name="Rraven"; version="1.0.9"; sha256="00iwjwqwjam45zcsggckdaqcd6sygh8ysahpvrx7xg4h5rdnhg92"; depends=[NatureSounds pbapply seewave tuneR warbleR]; }; Rrdrand = derive2 { name="Rrdrand"; version="0.1-16"; sha256="0j9yyvq8r1cgwj3kw1ak6hyazr67f2q0c1m651wdm0wcvm1ajx7f"; depends=[]; }; Rsagacmd = derive2 { name="Rsagacmd"; version="0.0.2"; sha256="02mz1q6zjrrjrf40d8y7xpzilk2f14zpsczcw9qr5v9zzch4kjxb"; depends=[foreign magrittr minpack_lm raster rgdal sf stringr XML]; }; - Rsampletrees = derive2 { name="Rsampletrees"; version="1.0.2"; sha256="1wz3dp1myjkxzf9l5mfli3dfbkc2fwg70xx7m9cxa06vq0a4w5pv"; depends=[ape haplo_stats Rcpp]; }; + Rsampletrees = derive2 { name="Rsampletrees"; version="1.0.3"; sha256="1qnvnhhzhyfbka4zjblddj5ad5d6q7rzb8rpikzpvcqn9s57lnqk"; depends=[ape haplo_stats Rcpp]; }; Rsampling = derive2 { name="Rsampling"; version="0.1.1"; sha256="14rp3j7iaii4rc3jkbijmbgvlagxxqjkz3vvfwwpxix43rsi8zsk"; depends=[]; }; Rsconctdply = derive2 { name="Rsconctdply"; version="0.1.3"; sha256="12xc1laxgivv4szp8341pvhmxnzzzzc2s4jhnqsqrbx71lbd9szg"; depends=[dplyr rjson rsconnect]; }; Rserve = derive2 { name="Rserve"; version="1.7-3.1"; sha256="16cg0cak9pvd9l35fjy1lsplxr5ncvb4apzg5mish5kff0cyk89v"; depends=[]; }; @@ -3918,22 +3928,21 @@ in with self; { Rsomoclu = derive2 { name="Rsomoclu"; version="1.7.5.3"; sha256="1l1kvr92n0pd6rkr663701lpz81mf0i4hpf80ssd27773m6yw0kg"; depends=[kohonen Rcpp]; }; Rspc = derive2 { name="Rspc"; version="1.2.2"; sha256="1cnzqpnh009wfs51dc4id9q3giaa8b6dc75b1lhzpwcvw0cxcy4y"; depends=[]; }; Rspotify = derive2 { name="Rspotify"; version="0.1.2"; sha256="1q8ajjx5ghlgxgch9gifvhi2gmsi0ph8pygwrb9jrd3ijahlw5k4"; depends=[dplyr httr jsonlite magrittr plyr]; }; - Rssa = derive2 { name="Rssa"; version="1.0"; sha256="0alh0vq3qqzrn1kklqfp52qknasfq6yzk2dprz3g9pyq05qhmhlw"; depends=[forecast lattice svd]; }; + RsqMed = derive2 { name="RsqMed"; version="0.1.7.1"; sha256="18r78svwbnri5283s5nxg4vrp29r6xx13h0n6w634jdpwaiw56gk"; depends=[GMMAT SIS]; }; + Rssa = derive2 { name="Rssa"; version="1.0.2"; sha256="14gzd6mz9v8c0c15sinf67f1ii6b6ximpfz8daq3800pw2cav49r"; depends=[forecast lattice svd]; }; Rsurrogate = derive2 { name="Rsurrogate"; version="2.0"; sha256="1pjyhlxqi8mcbywa7qa1vxgxr5jca0nc9vm1bx53vr231wgnb7gf"; depends=[survival]; }; Rsymphony = derive2 { name="Rsymphony"; version="0.1-28"; sha256="02x54ygbcd2600prcww1l9pb02skn96rj0jdljpky1228jbib4nx"; depends=[]; }; Rtauchen = derive2 { name="Rtauchen"; version="1.0"; sha256="09282k6qsjxgm26682npfjymmbx5g8flcc44awmkjl2k4fa1q9ha"; depends=[]; }; - RtextSummary = derive2 { name="RtextSummary"; version="0.1.0"; sha256="1kqzml8zmkqx6200g2jw5mmg5g043h6mr1skms1c2q905avd46gv"; depends=[dplyr Matrix_utils mlapi R6 stringr text2vec tidyr tokenizers]; }; - Rtextrankr = derive2 { name="Rtextrankr"; version="1.0.0"; sha256="16dby3xsfcjyp35xdflmgnh7zkqygfbffvj4jqa565vj9ksnq5ir"; depends=[igraph KoNLP sets stringi]; }; Rtnmin = derive2 { name="Rtnmin"; version="2016-7.7"; sha256="0f8ii87v29v61b93hx2yxdppp3nvgnl5imp80sbb4bjsdg0mf989"; depends=[]; }; - Rtrack = derive2 { name="Rtrack"; version="0.9.3"; sha256="0b73cr299hv2k6ia4ama6ciq9506wy2w2cyh1bv5wdqiyvf8hzia"; depends=[crayon KernSmooth openxlsx pbapply randomForest raster readxl rgeos rjson sp]; }; + Rtrack = derive2 { name="Rtrack"; version="0.9.6"; sha256="00xbgfv5a02f05pwlrn3v93ydi3xsil9hznj4rjisf0mc2pmzfj0"; depends=[crayon KernSmooth openxlsx pbapply randomForest raster readxl rgeos rjson sp]; }; Rtsne = derive2 { name="Rtsne"; version="0.15"; sha256="0v17vxizrs1msay24xl2bckfajr2c82wpqj07lyssbrq197nwdsn"; depends=[Rcpp]; }; Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.8"; sha256="0b3f2zkmbyshn19cnaaf042d0zwf43l9jnkqizfhxxwb93a4c1jn"; depends=[]; }; RtutoR = derive2 { name="RtutoR"; version="1.2"; sha256="19wmi30b5i6zj673d76gxl6j0k3ppfyl5fqrcs0dwmmadrrvbajq"; depends=[colourpicker devtools dplyr DT FSelector ggplot2 ggthemes officer plotly rlang rmarkdown shiny shinyBS shinydashboard shinyjs tidyr]; }; Rtwalk = derive2 { name="Rtwalk"; version="1.8.0"; sha256="0zxf66lsfq8by40flv34xzd5yy0wa1ah9li1d0h7f0yh9nbwhxl5"; depends=[]; }; Runiversal = derive2 { name="Runiversal"; version="1.0.2"; sha256="0667mspsjydmxi848c6wsf14gz72bmdj9b3lilma92b7fhqnv7ai"; depends=[]; }; - Runuran = derive2 { name="Runuran"; version="0.27"; sha256="0nvrxv3a0wl3rk5885qm20wxcnfy2lrxv5d99wjd02j3636gq353"; depends=[]; }; + Runuran = derive2 { name="Runuran"; version="0.30"; sha256="1a3z49nrx1azbm4blqcwwcbwnxcrcr8md350viakl8a0b3y2v59q"; depends=[]; }; RunuranGUI = derive2 { name="RunuranGUI"; version="0.3"; sha256="1h2bcc443z8vp4hjf4vss4ds5n6zc6x70kmw13b2431f56jq12fa"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 Runuran rvgtest]; }; - Rvcg = derive2 { name="Rvcg"; version="0.18"; sha256="0a9022ps8cddmblgyzzvfyb77n206dvbv0b7fpnfplis4s68zjkf"; depends=[Rcpp RcppArmadillo RcppEigen]; }; + Rvcg = derive2 { name="Rvcg"; version="0.19.1"; sha256="0brqnvhqj9052kkic1i8mxx7y1si9na5rwj1fmslsf5mih8n4grr"; depends=[Rcpp RcppArmadillo RcppEigen]; }; Rvmmin = derive2 { name="Rvmmin"; version="2018-4.17"; sha256="0mhzzwk311wa157l3n4x5x038asvjd81l45g1jclfsjr0smsffym"; depends=[optextras]; }; Rvoterdistance = derive2 { name="Rvoterdistance"; version="1.1"; sha256="16il36hkq1j6gyl5d8bx5khiiv6fy2m8vkhwiaaiqsliw2sspy4j"; depends=[Rcpp]; }; Rwave = derive2 { name="Rwave"; version="2.4-8"; sha256="1rmqwyj2r84sii0vfqhyhpi3n1n1zia2ca627fq9ksvwn110nrvh"; depends=[]; }; @@ -3941,7 +3950,7 @@ in with self; { Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1.1"; sha256="0kaxhaa65k1hkhl4kqfxyyk6v967xncrdr5hy8b808zlbqriankc"; depends=[]; }; Rwordseg = derive2 { name="Rwordseg"; version="0.3-2"; sha256="10jhfalh45rrcm76hwz4b5yl408ndx2wkr0i3q1avx6z6i45d8s6"; depends=[HMM tmcn]; }; RxCEcolInf = derive2 { name="RxCEcolInf"; version="0.1-4"; sha256="0qyhxqd5yi4d1prj0i4g3k29zi0mx6wkjx24ynb4arxw6h1vabh4"; depends=[coda lattice MASS MCMCpack mvtnorm]; }; - RxODE = derive2 { name="RxODE"; version="0.9.1-9"; sha256="09qi26ksqznkmmi5sq6sq0jicn1yc4l25dq4snb6r03vbbbq399c"; depends=[assertthat brew cli crayon digest dparser ggforce ggplot2 inline lotri magrittr Matrix memoise mvnfast pillar PreciseSums Rcpp RcppArmadillo remotes rex sys units]; }; + RxODE = derive2 { name="RxODE"; version="0.9.2-0"; sha256="1ynn38wk08szi34pk0hmlnanmfg19arazsqzafyw5kd1v3fdx4g4"; depends=[assertthat brew cli dparser ggplot2 inline knitr lotri magrittr Matrix memoise mvnfast pillar PreciseSums Rcpp RcppArmadillo rex sys units]; }; RxnSim = derive2 { name="RxnSim"; version="1.0.3"; sha256="0fi4aic2brfbl6rsnnfwqq7l8ygvlmr98w0v749l3djpgn7sfrig"; depends=[data_table fingerprint rcdk rJava]; }; Rxnat = derive2 { name="Rxnat"; version="1.0.6"; sha256="1wzb4dihzbyp23yggi1n7c5ikbq6h2gl9v7bgwxf00y2gwlabjx4"; depends=[httr RCurl]; }; Ryacas = derive2 { name="Ryacas"; version="1.1.2"; sha256="1m5z6x4w461rwk5ay6fc7y3l4b1nwlhma0lis2q8v93adnwgmg7n"; depends=[magrittr Rcpp]; }; @@ -3956,25 +3965,27 @@ in with self; { SALES = derive2 { name="SALES"; version="1.0.0"; sha256="1kjmlwa4v2i7hzm947xby9jr0irsf4c851f7jyqyhqna9c65rx0g"; depends=[Matrix]; }; SALTSampler = derive2 { name="SALTSampler"; version="1.1.0"; sha256="1lh1w5kcx2sqv5czpfypdbq5mw7pxjbdk0vyg23zzjs26ynbdkn9"; depends=[lattice]; }; SAM = derive2 { name="SAM"; version="1.1.2.1"; sha256="01gj9k1gf35vm11p0p590irqc5daaiwmq05rl2v3n8h2azaz1c7l"; depends=[Rcpp RcppEigen]; }; + SAMBA = derive2 { name="SAMBA"; version="0.9.0"; sha256="0gxc1s82bfhqj1rpmp0fm87frv77rgr8qjqai7zdgfz3jm474any"; depends=[optimx survey]; }; SAMCpack = derive2 { name="SAMCpack"; version="0.1.1"; sha256="1nnrfc74hd39vnb94lxwfjksmjaz62x0alc2ga46gqyygrrg57g5"; depends=[Rcpp RcppArmadillo RcppXPtrUtils Rdpack]; }; SAMM = derive2 { name="SAMM"; version="1.1.1"; sha256="175jk3s9w68ccw1h019380lp9cajfsy3zigcnplp87pcn3qg7x2i"; depends=[Rcpp RcppArmadillo]; }; SAMUR = derive2 { name="SAMUR"; version="0.6"; sha256="0iyv7ljjrgakgdmpylcxk3m3xbm2xwc6lbjvl7sk1pmxvpx3hhhc"; depends=[Matching]; }; SAMURAI = derive2 { name="SAMURAI"; version="1.2.1"; sha256="02fipbjcsbp2b2957x6183z20icv1yly2pd1747nyww9bmpa7ycm"; depends=[metafor]; }; SAPP = derive2 { name="SAPP"; version="1.0.7"; sha256="0rms9kq87dypdfs248m4393lgpfx37qah0n1s109pfnjh3k64pm3"; depends=[]; }; SAR = derive2 { name="SAR"; version="1.0.1"; sha256="0i6ffssr5iyh4z1ygbg0kg2nq4mlvshym7380f93gf85wpdql5gv"; depends=[AzureRMR AzureStor dplyr httr jsonlite Matrix R6 Rcpp RcppArmadillo RcppParallel]; }; - SARP_compo = derive2 { name="SARP.compo"; version="0.1.0"; sha256="0y1dmpdancnir609csf6i8565sn5hch3lgl3gq69i04nlfvf49f9"; depends=[car igraph]; }; + SARP_compo = derive2 { name="SARP.compo"; version="0.1.3"; sha256="1rps2zfwhxf579v29p929jh1qq71ayy1ij6a5ja6y8rdflzhp4hb"; depends=[car igraph]; }; SARP_moodle = derive2 { name="SARP.moodle"; version="0.3.10"; sha256="0wi6b25cd47kgj09pmfxf1hjsyqnhwj2liyv8f5nfxl9wzkdsxc5"; depends=[]; }; SASPECT = derive2 { name="SASPECT"; version="0.1-1"; sha256="1d3yqxg76h9y485pl5mvlx6ls1076f80b320yvx4zxmqq9yxmaba"; depends=[]; }; SAScii = derive2 { name="SAScii"; version="1.0"; sha256="0nq859xmrvpbifk8q1kbx3svg61rqdg8p8gr1pn85fr0j3w7h666"; depends=[]; }; SASmarkdown = derive2 { name="SASmarkdown"; version="0.4.3"; sha256="0jc21ylflvv4snik13731acxh9zw79s7hpswk58p2wzvavq8k9zn"; depends=[knitr]; }; SASmixed = derive2 { name="SASmixed"; version="1.0-4"; sha256="0491x4a3fwiy26whclrc19alcdxccn40ghpsgwjkn9sxi8vj5wvm"; depends=[]; }; - SASxport = derive2 { name="SASxport"; version="1.6.0.1"; sha256="0cswsp19w41g30hqzpazg20b45xw0gypmr213w7cqp6r7zjrxis6"; depends=[Hmisc stringi]; }; + SASxport = derive2 { name="SASxport"; version="1.7.0"; sha256="1na94lxrn8kbhxpiflg14nkdx13rjq9bvvqbxyxh1mq0q7vz7a2l"; depends=[Hmisc stringi]; }; SAVE = derive2 { name="SAVE"; version="1.0"; sha256="1m9rrga8x00hlvn0c1jcz6yz14pdm6h3dq14905mq49sw63c7zll"; depends=[coda DiceKriging]; }; SAVER = derive2 { name="SAVER"; version="1.1.2"; sha256="1s1kw8idkaj7j90fw4qn9k0wd4vz0sblsk06ry6lm4afcar0p158"; depends=[doParallel foreach glmnet iterators Matrix]; }; SAutomata = derive2 { name="SAutomata"; version="0.1.0"; sha256="0d9q7bm2f7s4aslml40n43vwcdkc8rnn9ygydccwi4b9a7y23k58"; depends=[]; }; SBRect = derive2 { name="SBRect"; version="0.26"; sha256="16g0ciy9q9irypsl8x36i0lavl41j3af13r2si0by8q6wj56pxi4"; depends=[rJava]; }; SBSA = derive2 { name="SBSA"; version="0.2.3"; sha256="1v23lzzziyjlvgn5p2n1qcq2zv9hsyz2w15lbnfi5wvinxhlg8sc"; depends=[Rcpp RcppArmadillo]; }; SBSDiff = derive2 { name="SBSDiff"; version="0.1.0"; sha256="0mw1646dmhxw6zz4pq7j0g3mf9bjn72g43sq7m72r8ma8ciqj7r2"; depends=[]; }; + SBmedian = derive2 { name="SBmedian"; version="0.1.0"; sha256="1flydpajgak0sh6v8r67fvjg3fjaylinqjgfrvi91lf29r822zdw"; depends=[expm Rcpp RcppArmadillo Rdpack]; }; SCAT = derive2 { name="SCAT"; version="0.5.0"; sha256="16dh4l5r8b49n68s571npmk14dnnx6y0np7lzvalg61z31zlya29"; depends=[]; }; SCBiclust = derive2 { name="SCBiclust"; version="1.0.0"; sha256="1wrlzgavri6g7s948775nfls83b8fa5mx3xvbvc8kmbrvdwms6cq"; depends=[sigclust sparcl]; }; SCBmeanfd = derive2 { name="SCBmeanfd"; version="1.2.2"; sha256="045498q71zqgcg8p3665vwd99a8ybf21y0sa7y8316zw66wb1caz"; depends=[boot KernSmooth]; }; @@ -3988,21 +3999,21 @@ in with self; { SCMA = derive2 { name="SCMA"; version="1.3.1"; sha256="0j0np99mcr8vgpcg664769gdb3rxm665h4jgj3zplihbh5ihxfj1"; depends=[]; }; SCOR = derive2 { name="SCOR"; version="1.1.0"; sha256="0r462g3wciz0kkvzwnd7660giy16q8bk8chm73syrw4fnfk2vdkv"; depends=[doParallel foreach iterators]; }; SCORER2 = derive2 { name="SCORER2"; version="0.99.0"; sha256="1a28wga69ip9s98ch2dqgl0qkwa3w6frmaqcvhclc360ik813mxq"; depends=[]; }; - SCORPIUS = derive2 { name="SCORPIUS"; version="1.0.5"; sha256="01zifl85gw9c3f34yr8llwv6xfdxdrx5z25dfa898hyc100rk9gc"; depends=[dplyr dynutils dynwrap ggplot2 lmds MASS Matrix mclust pbapply pheatmap princurve purrr ranger RANN RColorBrewer tidyr TSP]; }; + SCORPIUS = derive2 { name="SCORPIUS"; version="1.0.6"; sha256="1lrpy96v9wcf143nljrh8md6pr6why22xai59f5k1pvva07rn4vc"; depends=[dplyr dynutils dynwrap ggplot2 lmds MASS Matrix mclust pbapply pheatmap princurve purrr ranger RANN RColorBrewer tidyr TSP]; }; SCPME = derive2 { name="SCPME"; version="1.0"; sha256="0yhsaaa349wbrswcvp7w8c52wzp7rs3528rs4wqa8b3r3fh983mh"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; SCRSELECT = derive2 { name="SCRSELECT"; version="1.3-3"; sha256="118vwnd5gggvdhq7fbs0553l84vh5mhiag41q4svprd7p0pqd9hd"; depends=[mvtnorm]; }; SCRT = derive2 { name="SCRT"; version="1.3.1"; sha256="0wkxc22hv08riivjl09lhxvffqxxdy4xnvdmc2y69gssyinkbln1"; depends=[]; }; SCVA = derive2 { name="SCVA"; version="1.3.1"; sha256="1gdicpnbr8bdgrbwwslpwpzw2adpp94p8nhsrkdx0bjlpfhd4g9h"; depends=[ggExtra ggplot2 plotly scales]; }; SCperf = derive2 { name="SCperf"; version="1.1.1"; sha256="1kqi3sv9ds58l20pdcnjrrbf7fin82j73yqj5rbx4kjdw560ylb2"; depends=[]; }; SCtools = derive2 { name="SCtools"; version="0.3.0"; sha256="0iw7ckgfpijnbqicky69la3mpxmd1i5p4rgzznymprra3q1lx35h"; depends=[cvTools dplyr furrr future ggplot2 purrr stringr Synth]; }; - SDALGCP = derive2 { name="SDALGCP"; version="0.2.0"; sha256="04yqa0dlr4p6fpc4dsiqwb02j056fz9j8qwf7939b5hpg8k9qwjg"; depends=[geoR maptools mapview Matrix pdist plyr PrevMap progress raster sp spacetime spatstat splancs]; }; + SDALGCP = derive2 { name="SDALGCP"; version="0.3.0"; sha256="1mrx39rspbynnwdpww8vv3rf03589qym70vc9508k7iird5cn0qh"; depends=[geoR maptools mapview Matrix pdist PrevMap progress raster sp spacetime spatstat splancs]; }; SDAR = derive2 { name="SDAR"; version="0.9-3"; sha256="173qssvca1ds37x3518q3vfl2185b4fnkprvb52pp7mpv1w1xdrp"; depends=[grImport2 linbin readxl]; }; SDD = derive2 { name="SDD"; version="1.2"; sha256="0wzgm1hgjv5s00bpd7j387qbvn5zvyrrd5fr2rgyll4cw9p4sd33"; depends=[Hmisc rgl rpanel sm tseries]; }; SDDE = derive2 { name="SDDE"; version="1.0.1"; sha256="14vql1bypn409w9xcx1jdzff6apiagcz2wng3y24h3mk7yjv9bzy"; depends=[doParallel foreach igraph iterators]; }; + SDEFSR = derive2 { name="SDEFSR"; version="0.7.21"; sha256="02p46vbyzx5lmyxyhks10l94kz18pldgkxxg2zi5vys80gpy5jd2"; depends=[]; }; SDLfilter = derive2 { name="SDLfilter"; version="1.2.1"; sha256="1chvg3vh5mwsczbv2ayq9pj1my1i4m2dmr7az1hh00yvlvilfp0y"; depends=[data_table geosphere ggmap ggplot2 ggsn gridExtra maps raster sp trip]; }; - SDMPlay = derive2 { name="SDMPlay"; version="1.2"; sha256="0kafj5z1fi5d824h0n23qzn8a6n8fqm3bfc0pdfypzbaj2arjz3k"; depends=[dismo gbm raster SDMTools]; }; - SDMTools = derive2 { name="SDMTools"; version="1.1-221.2"; sha256="1xvcd97ikqsfdpk2fddy3k0z1ajqga7nv9bgac9c1wnjk1gqrpgh"; depends=[R_utils]; }; - SDMtune = derive2 { name="SDMtune"; version="1.0.1"; sha256="0214r8qv3lc74vsrz8sb5bl4c9jbc85vlgl6qgj49w5hw9pqidzx"; depends=[cli crayon dismo gbm ggplot2 htmltools jsonlite kableExtra maxnet nnet plotROC progress randomForest raster rasterVis Rcpp reshape2 rstudioapi scales stringr whisker]; }; + SDMPlay = derive2 { name="SDMPlay"; version="1.3"; sha256="0653yzw00ix1kh302h1fs735956dw0m2zvp2ng472f8qywrb395s"; depends=[dismo gbm raster]; }; + SDMtune = derive2 { name="SDMtune"; version="1.1.0"; sha256="0n876g5ddbnn50py0hgxp1p8ck54553w8aacbap3ylsa3ylz08g5"; depends=[dismo gbm ggplot2 jsonlite maxnet nnet progress randomForest raster Rcpp rstudioapi stringr whisker]; }; SDT = derive2 { name="SDT"; version="1.0.0"; sha256="1jwpfd1pnzy9wcl90qv5bgwi19shsw9064dvml9zwbif8yw8dzjj"; depends=[quadprog]; }; SDaA = derive2 { name="SDaA"; version="0.1-3"; sha256="0z10ba4s9r850fjhnrirj2jgnfj931vwzi3kw9502r5k7941lsx0"; depends=[]; }; SDraw = derive2 { name="SDraw"; version="2.1.8"; sha256="05yn0mqdv5a3zyvd6jhmkjh4w06ry8zy0libr56jmp8fcnninvyw"; depends=[deldir rgeos sp spsurvey]; }; @@ -4021,13 +4032,13 @@ in with self; { SEchart = derive2 { name="SEchart"; version="0.1"; sha256="19gqcd6xzwg37nzc67p88ip4i0v2f59ds85xfw9qq8lybvdm76k2"; depends=[JM]; }; SFS = derive2 { name="SFS"; version="0.1.4"; sha256="1pig64pj30yyfzyv97f74gshw4lnklrx0npp4da3absk6anb3iv7"; depends=[Rcpp RcppArmadillo]; }; SFtools = derive2 { name="SFtools"; version="0.1.0"; sha256="08k2ywkpk1pzp0qcwm7qx9gnv9hglspl9hrsrrfblagdpkw6rm2x"; depends=[doParallel ff wordspace]; }; - SGB = derive2 { name="SGB"; version="1.0"; sha256="11x0db241c9nkgpdd9p3v48klvkbrxrrbj73xb7lp6ldkdsi7gl2"; depends=[alabama Formula MASS numDeriv]; }; + SGB = derive2 { name="SGB"; version="1.0.1"; sha256="0j48fx9bf2k8k3ykp629jfi1jbs23673nz6rg54rvcrrsl6hb9v3"; depends=[alabama Formula MASS numDeriv]; }; SGCS = derive2 { name="SGCS"; version="2.7"; sha256="12kyfkd2phdmiyflgay2ndl6z5f9gz425mxi48wqs9ar3gh6akdw"; depends=[spatstat]; }; SGL = derive2 { name="SGL"; version="1.3"; sha256="055mx876ydg4kzvcm6rxfkxqz849zgzkzsskvrfgwj9fs1k6ja2v"; depends=[]; }; - SGP = derive2 { name="SGP"; version="1.9-0.0"; sha256="1nfb9sh10d4wkhzrxyq829b6dhf47pbjp0hzsixamiyjjzhrjz5x"; depends=[Cairo colorspace crayon data_table digest doParallel doRNG equate foreach gridBase gtools iterators jsonlite matrixStats plotly quantreg randomNames RSQLite sn toOrdinal]; }; + SGP = derive2 { name="SGP"; version="1.9-5.0"; sha256="0jsn6fvd5vaw6m6d7l83nphl19xmql4ir50av5x84rsi7qv461gg"; depends=[Cairo callr colorspace crayon data_table digest doParallel doRNG equate foreach gridBase gtools iterators jsonlite matrixStats plotly quantreg randomNames rngtools RSQLite sn toOrdinal]; }; SGPdata = derive2 { name="SGPdata"; version="23.0-0.0"; sha256="0801v5fq18bpy6sqsp1g6g7azi5ldl3xqpkrp19gsfbl4kcfbp3m"; depends=[crayon data_table]; }; - SHAPforxgboost = derive2 { name="SHAPforxgboost"; version="0.0.2"; sha256="1d0sq27qs6k8rjrjq0g54s76523a3khb873wdy4hinxhcqwqzcaz"; depends=[BBmisc data_table ggExtra ggforce ggplot2 ggpubr RColorBrewer xgboost]; }; - SHELF = derive2 { name="SHELF"; version="1.6.0"; sha256="1w26vv2r7hd8jpfn6vi4g9z3pav4gy58akvq2vzlcxiaxwv8lvnm"; depends=[ggExtra ggplot2 ggridges gridExtra Hmisc MASS rmarkdown scales shiny shinyMatrix tidyr]; }; + SHAPforxgboost = derive2 { name="SHAPforxgboost"; version="0.0.3"; sha256="09gwjw6pbq9b9fg1nsf2jv6dh2g6nmd5iyq6c8c2imgq0la1khgj"; depends=[BBmisc data_table ggExtra ggforce ggplot2 ggpubr RColorBrewer xgboost]; }; + SHELF = derive2 { name="SHELF"; version="1.7.0"; sha256="0rhxagblk8bmwd4wfbjf52dh6y1brajp6xn8rsjx7q0z4brgcr23"; depends=[ggExtra ggplot2 ggridges gridExtra Hmisc MASS rmarkdown scales shiny shinyMatrix tidyr]; }; SHIP = derive2 { name="SHIP"; version="1.0.2"; sha256="0b83cclibdz1r7sz968nmca4najwgps9wrdlsh4gxrl7fq40k4ln"; depends=[]; }; SHT = derive2 { name="SHT"; version="0.1.2"; sha256="0h93yky87rgrydn994j3anq7n2s2vgli47v5ra09gwlv8p1ijpxn"; depends=[fastclime pracma Rcpp RcppArmadillo Rdpack]; }; SI = derive2 { name="SI"; version="0.2.0"; sha256="0i6kpaw5yk39skm77nf56ai25clkparz3l8qx0223jrmdqbf97b7"; depends=[]; }; @@ -4043,11 +4054,11 @@ in with self; { SIN = derive2 { name="SIN"; version="0.6"; sha256="0vq80m3vl8spdnlkwvwy0gk3ziyybqzjp3scnfdcpn942ds7sgg9"; depends=[]; }; SIRE = derive2 { name="SIRE"; version="1.1.0"; sha256="0f624j087k7krg73bqn2qxdgzq66jyhvzz8n024vz3h4hwagxs5n"; depends=[dplyr igraph magrittr MASS Matrix matrixcalc numDeriv psych Rsolnp stringr systemfit]; }; SIRItoGTFS = derive2 { name="SIRItoGTFS"; version="0.2.4"; sha256="1hyhjwkv26fpplzqrdh41r8j91la5j0jidbwnh2vla6s3wf7jg47"; depends=[data_table dplyr easycsv reshape2 rgdal rgeos sp]; }; - SIS = derive2 { name="SIS"; version="0.8-7"; sha256="17fvl58qfwdfn29x9ar9w9v3a26cihcnqb55zgyhmamc57dinchy"; depends=[glmnet ncvreg survival]; }; + SIS = derive2 { name="SIS"; version="0.8-8"; sha256="1f5czwcgpmmn8habm24p3xh4w7jn2faais2x2gmaiq4dpjfnv6h8"; depends=[glmnet ncvreg survival]; }; SISIR = derive2 { name="SISIR"; version="0.1"; sha256="08lw9y38j5qq00m2vcxsac97lg14j4w1y6607vw8isrb3qb5db9z"; depends=[doParallel expm foreach glmnet Matrix RSpectra]; }; SIfEK = derive2 { name="SIfEK"; version="0.1.0"; sha256="037ps6yfy7w6i8vm0b78c8w9kdmw312dl5nc2qz86rfk8kjg7w27"; depends=[MASS numDeriv ramcmc smfsb]; }; SK = derive2 { name="SK"; version="1.1"; sha256="19yg7yc2k4zz29bh42lw2jpjvkdj33f26xkfs8vz8lpp98yjf2vx"; depends=[FitAR GD MASS RColorBrewer rgeos rtop sp]; }; - SKAT = derive2 { name="SKAT"; version="1.3.2.1"; sha256="0ylfz63xiq2zw9nc8nqr89qbhl3fnkhjgg9x7yxjm78vrn640hkl"; depends=[]; }; + SKAT = derive2 { name="SKAT"; version="2.0.0"; sha256="1qkc95n31bmz5y3saai0z50a081mngjlsypc259hbw355xayj2xr"; depends=[Matrix SPAtest]; }; SLC = derive2 { name="SLC"; version="0.3"; sha256="0l0y1sjj0glsb7vwla99ijclcgaq2y85bgz1wqm348n4shsmm2rs"; depends=[]; }; SLDAssay = derive2 { name="SLDAssay"; version="1.8"; sha256="04ykj7s9kpvg5bmf7x16154kfpdy45b7y7hhyh31sxlscv7c5bbp"; depends=[]; }; SLEMI = derive2 { name="SLEMI"; version="1.0"; sha256="1yfyqxl9sszym418p64zalc2yna9s9qgk9wvviz7n44icsdps33q"; depends=[caret corrplot doParallel e1071 foreach ggplot2 ggthemes gridExtra Hmisc nnet reshape2 stringr]; }; @@ -4064,7 +4075,7 @@ in with self; { SMITIDstruct = derive2 { name="SMITIDstruct"; version="0.0.5"; sha256="12ffxj96w3pi18l0scz5sd3dl37vd4vg2wcfykaxdhf8z142ha3k"; depends=[Biostrings ggplot2 sf]; }; SMITIDvisu = derive2 { name="SMITIDvisu"; version="0.0.6"; sha256="0563z9dypxsd9g532i1xfxdi8d29zwdla5ria15harimfda55ksq"; depends=[htmlwidgets jsonlite magrittr Rcpp yaml]; }; SMLoutliers = derive2 { name="SMLoutliers"; version="0.1"; sha256="10frs7wcyn368m7fvw2f1cyd0xqr6sv5jziixnyvr8q5fadyl2p0"; depends=[]; }; - SMM = derive2 { name="SMM"; version="1.0.1"; sha256="0g2blwcir0sxvqrivcyn9a8ssx34834lgcwrjwb6kcrq224dchws"; depends=[DiscreteWeibull seqinr]; }; + SMM = derive2 { name="SMM"; version="1.0.2"; sha256="1g1c7ssdcnzgv6b221ya1xrypg2ksahc7qj1042j8nlx5wg29cld"; depends=[DiscreteWeibull seqinr]; }; SMMA = derive2 { name="SMMA"; version="1.0.2"; sha256="13psgrpljnaxpcq4amiyg5mqhpzmb2hyb7jzh3h8wyq18rvs3s4d"; depends=[Rcpp RcppArmadillo]; }; SMNCensReg = derive2 { name="SMNCensReg"; version="3.0"; sha256="06542jacy74mw6ic0i1ml09pn45sll96bya7dqja6bg9yp0m6bvr"; depends=[Matrix PerformanceAnalytics]; }; SMPracticals = derive2 { name="SMPracticals"; version="1.4-3"; sha256="0zxq84f9i3b86xx6msb25b61gyj9k09iab2b7wg4d93yas9qzayf"; depends=[ellipse MASS nlme survival]; }; @@ -4076,14 +4087,14 @@ in with self; { SNPassoc = derive2 { name="SNPassoc"; version="1.9-2"; sha256="113byj8zbg6xyxb1qzm76sqfyk3fap0sd90691zzm1x2pbfnb3mh"; depends=[haplo_stats mvtnorm survival]; }; SNPknock = derive2 { name="SNPknock"; version="0.8.2"; sha256="121pdgvdffj61hw8x8m76na0cg5iw5gb586q05ikw5d959mmbzrs"; depends=[Rcpp RcppArmadillo RcppProgress Rdpack]; }; SNPmaxsel = derive2 { name="SNPmaxsel"; version="1.0-3"; sha256="0pjvixwqzjd3jwccc8yqq9c76afvbmfq0z1w0cwyj8bblrjpx13z"; depends=[combinat mvtnorm]; }; - SNSequate = derive2 { name="SNSequate"; version="1.3.2"; sha256="0aln71h4g6xayh59zd7bsh66l0jv34zn5kc43ldm2g0d82gh6xr4"; depends=[emdbook knitr magic plyr progress statmod]; }; + SNSequate = derive2 { name="SNSequate"; version="1.3.3"; sha256="1qadhk2acpr0lkh2z37ivif9dbp7zb31lfn32ch2sb0z9pp56his"; depends=[emdbook knitr magic plyr progress statmod]; }; SNscan = derive2 { name="SNscan"; version="1.0"; sha256="1s7dxi7faih0phx5wk2xrrzhvfwicq3h2cg8x2klwbrslin973lz"; depends=[igraph poweRlaw Rmpfr]; }; SOAR = derive2 { name="SOAR"; version="0.99-11"; sha256="1n38gx5sxpkqfkk4y6vpp6g19b8bs5bisni9wn6311s0csizp86m"; depends=[]; }; SODC = derive2 { name="SODC"; version="1.0"; sha256="18s4rcp5dzchvwrzzbfhbs3x91zlg1rymjarxjk5i429mfrn0krx"; depends=[magic MASS ppls psych]; }; SOFIA = derive2 { name="SOFIA"; version="1.0"; sha256="1jlaggxa2nz2r5yb2xmf0dh5wmxfdk6xwn0l3nwsqh82vyxhp7l9"; depends=[png]; }; SOIL = derive2 { name="SOIL"; version="1.1"; sha256="0dvfh84xjzald51kmdb546par2rbjdn3nys9y9w7cvafv2lc5yj9"; depends=[brglm2 glmnet MASS ncvreg]; }; SOLOMON = derive2 { name="SOLOMON"; version="1.0-1"; sha256="0z91wsrgdir25ks4dnirzsg4f1ngal7n40235m3w43j6y6dhkqrc"; depends=[]; }; - SOMbrero = derive2 { name="SOMbrero"; version="1.2-4"; sha256="0l9cw17l18pp99yrqczg8d7zbdbp65iyyy24iq91fsfwr5p1w4xn"; depends=[igraph RColorBrewer scatterplot3d shiny wordcloud]; }; + SOMbrero = derive2 { name="SOMbrero"; version="1.2-5"; sha256="0scr6dfp70im3nf5frkagb2di6n3b5c1yiiwq9d3c0r4gxi40dzc"; depends=[igraph RColorBrewer scatterplot3d shiny wordcloud]; }; SOPIE = derive2 { name="SOPIE"; version="1.5"; sha256="0isvb2vzzpn57bq0ix2pfaqdnl5z8qk6v6fvf15vnxcqg2sm63q5"; depends=[ADGofTest circular]; }; SOR = derive2 { name="SOR"; version="0.23.1"; sha256="1accs4bqy080nfmgkdg7bgamdrcwcn01y6nydvvq12w3v8asdvwh"; depends=[Matrix]; }; SOUP = derive2 { name="SOUP"; version="1.1"; sha256="0k8nlvl4681cz07xjazprcc0jhknfa5hgr7w1qxxmgrp3sprr8r4"; depends=[tensor]; }; @@ -4115,17 +4126,17 @@ in with self; { SQB = derive2 { name="SQB"; version="0.4"; sha256="12ii8xlwd2r77bj76j7l43898ras25z3plhhv106jaklhpcnk23m"; depends=[caret nnet pls rpart]; }; SQDA = derive2 { name="SQDA"; version="1.0"; sha256="0nfimk625wb64010r5r7hzr64jfwgc6rbn13wvrpn0jgayji87h6"; depends=[limma mvtnorm PDSCE]; }; SQN = derive2 { name="SQN"; version="1.0.5"; sha256="0kb8kf6g482zqdp4avwvhs3pqghfny757dbzfl1abaigmvwvx4qj"; depends=[mclust nor1mix]; }; - SQRL = derive2 { name="SQRL"; version="0.7.0"; sha256="166sl5vy1nf854wr9ps66h8166l1l8yla5d6c9icivyik77nqqjv"; depends=[RODBC]; }; - SQUAREM = derive2 { name="SQUAREM"; version="2020.1"; sha256="0v4ax1v8diw2w7fdhfzz1z0bwixkmcrc39ax3y116f399rc06qbs"; depends=[]; }; + SQRL = derive2 { name="SQRL"; version="0.7.1"; sha256="1ipkd1pl3v9an88maailz8ypikyh6rnxzpnb7wfxphks6m2swgfy"; depends=[RODBC]; }; + SQUAREM = derive2 { name="SQUAREM"; version="2020.2"; sha256="1j6sa93xjvynnzx9jx79a3fysbykmbqyknknsqif5bcha6xp6cvf"; depends=[]; }; SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; }; SRRS = derive2 { name="SRRS"; version="0.1.1"; sha256="0jv545a97q4pyl89lmhn3y0jhdzyq033mvx144x8lcgx59s7cyi3"; depends=[gtools tcltk2]; }; SRTtools = derive2 { name="SRTtools"; version="1.2.0"; sha256="1203i6nqclx0faxyvhdaapmfxy8h95jj83svxriqh1hpava5s1dy"; depends=[magrittr]; }; - SSBtools = derive2 { name="SSBtools"; version="0.5.0"; sha256="0z6nzsg8mfmnzzf24w7s7lhkp3xd7vlkgjn34x6yps82ry3mhyra"; depends=[Matrix stringr]; }; - SSDM = derive2 { name="SSDM"; version="0.2.6"; sha256="0qyx755h6rqgc6i3mw0vdaw2jx1yclkm9qxb98njkfk8if7wmbmn"; depends=[dismo e1071 earth gbm gplots mgcv nnet randomForest raster rpart SDMTools shiny shinydashboard shinyFiles sp spThin]; }; + SSBtools = derive2 { name="SSBtools"; version="0.6.0"; sha256="1p00kacf49h475jdq9lf955dpzw81n399zzpzx7igp8d2snccy3f"; depends=[Matrix stringr]; }; + SSDM = derive2 { name="SSDM"; version="0.2.8"; sha256="19l78dkjk76ababkd7xsfn0fy99khfa4i502q4vllpvch4cjz51c"; depends=[dismo e1071 earth gbm ggplot2 mgcv nnet poibin randomForest raster reshape2 rpart scales shiny shinydashboard shinyFiles sp spThin]; }; SSDforR = derive2 { name="SSDforR"; version="1.5.12"; sha256="12vhdh808w4qbr7ipidx79y0lsn04za7d0m6dxpn8mgbplr64kdb"; depends=[MAd MASS metafor psych SingleCaseES TSA TTR]; }; SSLASSO = derive2 { name="SSLASSO"; version="1.2-2"; sha256="0vnn9ksdf0qgjflgx1sfj6q6j9jfnarbx2222rh9kb10jy8b16jv"; depends=[]; }; SSM = derive2 { name="SSM"; version="1.0.1"; sha256="1h8yyzh5rn5jay70kyzvwirfndi049a5w28qigrjv5rxd7ml84l7"; depends=[]; }; - SSN = derive2 { name="SSN"; version="1.1.13"; sha256="0hk138p1jnlda7d2wxlrf2ipkgliqlip1i5xp67aym979g0b3aaj"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; + SSN = derive2 { name="SSN"; version="1.1.15"; sha256="057lh2ym82ff3c25vyh97csns4jwlbvxwc4jai0i4yplxf0ccmha"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; SSOSVM = derive2 { name="SSOSVM"; version="0.2.1"; sha256="11wlalpw6yhvv95xr8vvgxgl4jafc2ghzsk5wqyv71ahxarmrlss"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; SSRA = derive2 { name="SSRA"; version="0.1-0"; sha256="1d0lg2dz8vf1d63366s5apm0ygrsfxivbrsij907r244zj6i1c37"; depends=[shape stringr]; }; SSRMST = derive2 { name="SSRMST"; version="0.1.1"; sha256="15s6vcmk8a27yw3rlfkajby6qkizp4sfiyi63m7hc86svd15x4wg"; depends=[survival survRM2]; }; @@ -4155,18 +4166,18 @@ in with self; { SVN = derive2 { name="SVN"; version="1.0.1"; sha256="0n93lqb1f2s2qvzc8lrcqmr0fhd57xqbi0ymrqqmll31ns679m92"; depends=[data_table igraph memoise]; }; SWIM = derive2 { name="SWIM"; version="0.2.0"; sha256="120rr71hlvwbb3qdwl7s7mhrbjikl11yp55xmddk6xqs13qvi5j0"; depends=[ggplot2 Hmisc nleqslv plyr Rdpack reshape2]; }; SWMPr = derive2 { name="SWMPr"; version="2.3.1"; sha256="1az6ss8wkdgq4l1cmfflajzs7z6w6140bclb289gb090pi69p7gy"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; - SWMPrExtension = derive2 { name="SWMPrExtension"; version="1.1.2"; sha256="0123lcb6jfh3gbh2jmdpargry44fncm7j505vpkcp661fcjckymd"; depends=[broom dplyr EnvStats flextable ggplot2 ggthemes leaflet lubridate magrittr maptools officer RColorBrewer rgdal rgeos rlang scales sp SWMPr tidyr]; }; + SWMPrExtension = derive2 { name="SWMPrExtension"; version="1.1.3"; sha256="1xyn802aadx3fxckqvimkpwbx0pv6g3wqjzjx2k46qnm2gl6ck0v"; depends=[broom dplyr EnvStats flextable ggplot2 ggthemes leaflet lubridate magrittr maptools officer RColorBrewer rgdal rgeos rlang scales sp SWMPr tidyr]; }; SYNCSA = derive2 { name="SYNCSA"; version="1.3.4"; sha256="0n9za302x638s666xs86zy94qch9wn0rln8xy6x9jymhhq9zn0kj"; depends=[FD permute RcppArmadillo vegan]; }; SafeBayes = derive2 { name="SafeBayes"; version="1.1"; sha256="09bhd3z9ia2mvpn1h0hil00j6cm4x9y9ymxc3gj8wd4ybdi3jqlm"; depends=[]; }; SafeQuant = derive2 { name="SafeQuant"; version="2.3.1"; sha256="0rgi0ij33sdvkpmjynfmsj0f29kl9l9ylsqckg5x4v49m6mzq1yh"; depends=[Biobase corrplot data_table epiR gplots limma optparse seqinr]; }; SailoR = derive2 { name="SailoR"; version="1.0"; sha256="1gb50qd9s3dwdvl6qihpkgwlhckbhn7h3wpz9k74xgyd874krcld"; depends=[]; }; Sample_Size = derive2 { name="Sample.Size"; version="1.0"; sha256="1vfnb2gg3rax4sxd81xqznfvh300nv45nn7zjsyrdjyg1n3ym7nw"; depends=[]; }; - SampleSize4ClinicalTrials = derive2 { name="SampleSize4ClinicalTrials"; version="0.1.1"; sha256="15q1jsvnz3bhnjil0wbladahac0ppx3qgg5qz7z70vnivgjah606"; depends=[]; }; + SampleSize4ClinicalTrials = derive2 { name="SampleSize4ClinicalTrials"; version="0.2.1"; sha256="1z95ir2jcybw0sq33b5zx9gxcszizcrwkglr2i7jmqazampg2hd1"; depends=[]; }; SampleSizeMeans = derive2 { name="SampleSizeMeans"; version="1.1"; sha256="1wbc46n8b8wbcxl21blbzs5728dr8r0l8d3jpzbha8pcav0xrh1m"; depends=[]; }; SampleSizeProportions = derive2 { name="SampleSizeProportions"; version="1.0"; sha256="0mvkvx3nni0l8ys68sq3h2zlbjvksdcdzxqlf03k0ca5bbcmdf9l"; depends=[]; }; SamplerCompare = derive2 { name="SamplerCompare"; version="1.3.0"; sha256="1lqnkgbg1naa3crk3rakrf37vvxj6mbilbpxrv0k5iifdmh0b7k1"; depends=[mvtnorm]; }; SamplingBigData = derive2 { name="SamplingBigData"; version="1.0.0"; sha256="0khrh7vfqqzpfp16x0ic5ml854wr2fj28cx95s6c0pz91hzlxkns"; depends=[]; }; - SamplingStrata = derive2 { name="SamplingStrata"; version="1.5"; sha256="1rh26jcb2ksjfabpqprc0glw4b6ig8hagqjhxrm6pgji9para31x"; depends=[doParallel formattable memoise pbapply]; }; + SamplingStrata = derive2 { name="SamplingStrata"; version="1.5-1"; sha256="01kjm45pc1zfy2xlp9fhynv4x2mzsgjwymr5j7narpmdsm14mxcx"; depends=[doParallel formattable memoise pbapply]; }; SanFranBeachWater = derive2 { name="SanFranBeachWater"; version="0.1.0"; sha256="18w2q3hzcrbmagnjyrn1ikwiyjh723mjb2vy0d8p1a6za0460p9w"; depends=[dplyr lubridate magrittr readr rvest tibble xml2]; }; SanzCircos = derive2 { name="SanzCircos"; version="0.1.0"; sha256="0vw41qldp1gsj4mx2hdd5jfhx9r8pv62i8gvs86p6bvfzy2l1lq4"; depends=[dplyr pbapply purrr randomcoloR readr tibble tidyr]; }; Scale = derive2 { name="Scale"; version="1.0.4"; sha256="1fa3840kji34qpbw6mxfavk8wq0vq0vx2w6ya71idbkxnvwc3y06"; depends=[Hmisc MASS psych]; }; @@ -4193,24 +4204,25 @@ in with self; { Sejong = derive2 { name="Sejong"; version="0.01"; sha256="1d9gw42dbs74w7xi8r9bs6dhl23y16yxqzyhqqayvcm98q3l77nf"; depends=[]; }; SeleMix = derive2 { name="SeleMix"; version="1.0.1"; sha256="1qzy59wbjh8llm66l70xi0p3lv94iawh2h5vwa9sqy2ra5vmpaxk"; depends=[mvtnorm]; }; Select = derive2 { name="Select"; version="1.4"; sha256="1qx4wwxxwjq31vf645xvwb0y2z5h4v6ca8fcrfpaj5kc33f333v2"; depends=[ade4 FD lattice latticeExtra Rsolnp]; }; - SelectBoost = derive2 { name="SelectBoost"; version="1.4.0"; sha256="14i6dgg1yqnghjjfvi7l58kqm6pry9b91sy9gkwrvfqg0nz1dpny"; depends=[Cascade glmnet igraph lars msgps Rfast]; }; + SelectBoost = derive2 { name="SelectBoost"; version="2.0.0"; sha256="137fxvlpc2vyn5w93ih8bm6pp198xwlbb9ky8dhxgarh0syz8g4v"; depends=[abind Cascade glmnet igraph lars msgps Rfast spls varbvs]; }; SelvarMix = derive2 { name="SelvarMix"; version="1.2.1"; sha256="02d16ffw5syq0d3yiim9jgrjlz99n956zxp23idpsmq6lb2whq66"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; - SemNeT = derive2 { name="SemNeT"; version="1.1.2"; sha256="07vgnfj4wirfpc9mjy6m0qd3pc0423qq8bvpk5zzmynvaqgnb89j"; depends=[doParallel dplyr foreach ggplot2 igraph lsa magrittr NetworkToolbox networktools pbapply plyr purrr qgraph RColorBrewer SemNetCleaner]; }; - SemNetCleaner = derive2 { name="SemNetCleaner"; version="1.1.3"; sha256="177r9z2z8l5ri2h3s94day8d19n13hc4861vc6fcymaa35nh0z02"; depends=[foreign hunspell R_matlab readxl searcher SemNetDictionaries stringdist]; }; + SemNeT = derive2 { name="SemNeT"; version="1.1.3"; sha256="0r0xr918smq3yn93hx1k0h4vk634ml7zh7d18r2996d72q3ns9ik"; depends=[doParallel dplyr foreach ggplot2 igraph lsa magrittr NetworkToolbox networktools pbapply plyr purrr qgraph RColorBrewer SemNetCleaner]; }; + SemNetCleaner = derive2 { name="SemNetCleaner"; version="1.1.4"; sha256="1rdsnh46yiagdxmgq530y9jq2vil1nrfrzmzbcxmigd7wib8cr26"; depends=[foreign htmlTable hunspell knitr R_matlab readxl rmarkdown searcher SemNetDictionaries stringdist stringi]; }; SemNetDictionaries = derive2 { name="SemNetDictionaries"; version="0.1.5"; sha256="179dgq65m4kzbqxgcicnchahslildc43f506sa7x2prbr7by27d3"; depends=[]; }; Semblance = derive2 { name="Semblance"; version="1.1.0"; sha256="1kzrg5z3244nx9y37p092wpangni3fxpx04i5fb4dhrmav4rvgab"; depends=[DescTools fields msos PerformanceAnalytics]; }; SemiCompRisks = derive2 { name="SemiCompRisks"; version="3.3"; sha256="06anhf0kqaz4i84g73w3l4gf0q2mwi00vlkciqfbxpwgrbacplf6"; depends=[Formula MASS survival]; }; SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.6"; sha256="0nga790kcrvmbrx5asp4062711x0kjsccc246l4syiiw30b769ig"; depends=[MASS numDeriv Rsolnp]; }; SemiPar = derive2 { name="SemiPar"; version="1.0-4.2"; sha256="0pa3drpvclkw81ji5m1h5arj5c2rh03dnlff97cnnr1v5kvg1i4w"; depends=[cluster MASS nlme]; }; SenSrivastava = derive2 { name="SenSrivastava"; version="2015.6.25"; sha256="0r4p6wafnfww07kq19lfcs96ncfi0qrl8n9ncp441ri9ajwj54qk"; depends=[]; }; - SensMixed = derive2 { name="SensMixed"; version="2.1-0"; sha256="0ykg94amnm9clf8d3naap8fmv9qqc6j1q52wnb83zk7ry44dp7dh"; depends=[doBy ggplot2 Hmisc lme4 MASS plyr reshape2 shiny shinyBS xtable]; }; SensitivityCaseControl = derive2 { name="SensitivityCaseControl"; version="2.1"; sha256="00jqzqx7g0av9lw13is723gph486gb8ga0wgcmmzpmb24s5nya9z"; depends=[]; }; - SensoMineR = derive2 { name="SensoMineR"; version="1.23"; sha256="0a1s2wrb86a0y2faxj5ax8fa6vfcclgg7bcff4j7jb40ilxnxhn4"; depends=[AlgDesign cluster FactoMineR ggplot2 gtools KernSmooth reshape2]; }; + SensoMineR = derive2 { name="SensoMineR"; version="1.25"; sha256="0bnb8cx3vhmzlrnhgaarbr94l41c5jx4761vzc5xa7m0ih40q3s0"; depends=[AlgDesign cluster FactoMineR ggplot2 gtools KernSmooth reshape2]; }; SensusR = derive2 { name="SensusR"; version="2.3.1"; sha256="1x1a8vnpn6h7905wa4lvf7vibkl2dsa4yyg2sg4bbi719lcki2q0"; depends=[ggmap ggplot2 jsonlite lubridate openssl plyr R_utils]; }; SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-3"; sha256="0k6sf25hqisjjc97n17vdihpblab0ywv77lfxdzwpsbcv2x6gsx9"; depends=[ggplot2 glmnet moments ngramrr qdapDictionaries spikeslab stringdist tm]; }; SeqAlloc = derive2 { name="SeqAlloc"; version="1.0"; sha256="04rhr3gb2p9i35a3x4k8m0lv42ncfqlhx6sf3bq8yihppwrag8x3"; depends=[]; }; + SeqDetect = derive2 { name="SeqDetect"; version="1.0.7"; sha256="054b5v0jzk9pj9hrxk31kvcdm789lx8gzh70ivskixz57kajmiss"; depends=[dplyr eventdataR igraph Rcpp]; }; SeqFeatR = derive2 { name="SeqFeatR"; version="0.3.1"; sha256="1dvl65n60j7wl0jdb0myi9hprlr9grq6nf9m68gzxm9sz3h8lpvh"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags scales tcltk2 widgetTools]; }; SeqGrapheR = derive2 { name="SeqGrapheR"; version="0.4.8.5"; sha256="041hlf64zbndz76r076pmym4dw4xl3fahryvpvjspw0sdlhmfm8c"; depends=[Biostrings cairoDevice gWidgets gWidgetsRGtk2 igraph rggobi]; }; + SeqKat = derive2 { name="SeqKat"; version="0.0.8"; sha256="09b5zrp41241ha5q8bxll9n12sn11hsbv46g2ld1lqsy2razivr4"; depends=[doParallel foreach Rcpp]; }; SeqMADE = derive2 { name="SeqMADE"; version="1.0"; sha256="0nf1xjhk0kpmmzgcxycg3ccxvwq6gydjq7xq6n9m7k7v35v9v3qf"; depends=[MASS]; }; SeqNet = derive2 { name="SeqNet"; version="1.1.0"; sha256="0dbiafqgqnmws38lpa58mkzciprkan5qnrw9aivi89s065ykjd74"; depends=[fitdistrplus ggplot2 igraph mvtnorm purrr RColorBrewer Rcpp rlang tibble]; }; SequenceSpikeSlab = derive2 { name="SequenceSpikeSlab"; version="0.1.1"; sha256="079qm4klgaml99j4cshy3n54pg7q537zlagib4xd8mswdmqdvll6"; depends=[Rcpp RcppProgress selectiveInference]; }; @@ -4219,27 +4231,28 @@ in with self; { SetMethods = derive2 { name="SetMethods"; version="2.4"; sha256="06fcin03mvqbg4mk09ygn54li0wdyp57mv902c49zs9v4y8r88cs"; depends=[betareg fmsb ggplot2 ggrepel lattice QCA scatterplot3d]; }; SetRank = derive2 { name="SetRank"; version="1.1.0"; sha256="0p7vwsw05s5hfw1mfh3fbm9nfzsymnxzrdjin7k21dx7asb618wy"; depends=[data_table igraph XML]; }; SetTest = derive2 { name="SetTest"; version="0.2.0"; sha256="08wc6cbnannmwkncqhpcw6l0y7c1v7z3awk5j7fd853nszfmpbk0"; depends=[]; }; - Seurat = derive2 { name="Seurat"; version="3.1.2"; sha256="0m1qi39snbmkkv1p07bzg1r7snc9x6a1y0dghvpk1nzgcfpmnsj4"; depends=[ape cluster cowplot fitdistrplus future future_apply ggplot2 ggrepel ggridges httr ica igraph irlba KernSmooth leiden lmtest MASS Matrix metap pbapply plotly png RANN RColorBrewer Rcpp RcppAnnoy RcppEigen RcppProgress reticulate rlang ROCR rsvd Rtsne scales sctransform SDMTools tsne uwot]; }; + Seurat = derive2 { name="Seurat"; version="3.1.4"; sha256="0lhjbjhv1hnx5i3gkx41k68i8ykay3f24708h30wx9xywww9lsvi"; depends=[ape cluster cowplot fitdistrplus future future_apply ggplot2 ggrepel ggridges httr ica igraph irlba KernSmooth leiden lmtest MASS Matrix metap patchwork pbapply plotly png RANN RColorBrewer Rcpp RcppAnnoy RcppEigen RcppProgress reticulate rlang ROCR rsvd Rtsne scales sctransform tsne uwot]; }; ShapeChange = derive2 { name="ShapeChange"; version="1.4"; sha256="1ch7avx8mxjk8vrp17inaihmbsv968wflyk1n4fbjvacbl24vn2b"; depends=[coneproj quadprog]; }; - ShapePattern = derive2 { name="ShapePattern"; version="1.0.1"; sha256="18jzs0sq21qhldm86mgx7yb9kl473vv1aljl9hm4560xy5pd5fnb"; depends=[rgdal rgeos sp]; }; + ShapePattern = derive2 { name="ShapePattern"; version="2.0.2"; sha256="0mby6zr5vv145qn744xkgas1zw7hns9faygp8y0887qx57qhpyw7"; depends=[landscapemetrics raster rgdal rgeos sp]; }; ShapeSelectForest = derive2 { name="ShapeSelectForest"; version="1.3"; sha256="1vvfl1ldrn0l9w38hx0hhszvj5a2dpmfl6ljzw7f0ji181lrx96m"; depends=[coneproj raster rgdal]; }; - SharpeR = derive2 { name="SharpeR"; version="1.2.0"; sha256="1gw8wwdqbra4bccbcamqn2j7d853rga1vcvk1p6naih6vbnfqn2s"; depends=[matrixcalc sadists]; }; + SharpeR = derive2 { name="SharpeR"; version="1.2.1"; sha256="1xcnbjwcqc9mhb6kqcarkmjcr5zrn5hryfp4i4rayra9yk9k18r8"; depends=[matrixcalc sadists]; }; ShiftShareSE = derive2 { name="ShiftShareSE"; version="1.0.1"; sha256="09sm3frapxv1zhxy84wqyaxdk5jx62ijszfa34zlknlgivividfy"; depends=[Formula]; }; ShinyImage = derive2 { name="ShinyImage"; version="0.1.0"; sha256="0nhsaq6i9lr8gqpdkahw3qr0c0cb0qwc0nqpk1ism21l6zg6ahc9"; depends=[EBImage R6 shiny shinyjs]; }; - ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.3.1"; sha256="1s1kb1rrppk0kfqywgsmyfl32hrq9ywv8241n9d3xv88cflxz237"; depends=[corrplot cowplot CTT data_table deltaPlotR difNLR difR DT ggdendro ggplot2 gridExtra knitr latticeExtra ltm mirt moments msm nnet plotly psych psychometric reshape2 rmarkdown shiny shinyBS shinydashboard shinyjs stringr VGAM xtable]; }; + ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.3.2"; sha256="1h6zja2yvg0dj01x7l29jv6rx0h3adqnkkjqgajd8vyj5hv536v7"; depends=[corrplot cowplot CTT data_table deltaPlotR difNLR difR DT ggdendro ggplot2 gridExtra knitr latticeExtra ltm mirt moments msm nnet plotly psych psychometric reshape2 rmarkdown shiny shinyBS shinydashboard shinyjs stringr VGAM xtable]; }; ShinyTester = derive2 { name="ShinyTester"; version="0.1.0"; sha256="0wm4rl2p8ggw6v2chk9b6ygh5y8p8cwzbyra0nr0qr2ka97didp8"; depends=[dplyr purrr readr stringr tidyr visNetwork]; }; - ShortForm = derive2 { name="ShortForm"; version="0.4.4"; sha256="05ia1x8hmaa8df77jbs4nd04jfbglr5z6hfg9v702zhvap0mkijj"; depends=[ggplot2 lavaan stringr tidyr]; }; + ShortForm = derive2 { name="ShortForm"; version="0.4.6"; sha256="0r8flmfhm47kyzy97j3mr87srfsxwlqqsx7v0ay9qm7q2jfg6xsw"; depends=[ggplot2 lavaan stringr tidyr]; }; ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.4.0"; sha256="0iyri3syjk9xv49d87fdyhnxg5c5x827vnak8vgckkkp62sdln2q"; depends=[Rcpp RcppArmadillo]; }; SiER = derive2 { name="SiER"; version="0.1.0"; sha256="1ng6vnh30z6z1nvclsdzc9gdbrsrb2kqdqvs6fwm0j1zqlk12x0y"; depends=[]; }; SiMRiv = derive2 { name="SiMRiv"; version="1.0.4"; sha256="1sdq1mdm5jm66jmq7mas9skq8014xd7iz16av64x645l4qxkawzw"; depends=[mco raster rgdal sp]; }; - SiZer = derive2 { name="SiZer"; version="0.1-5"; sha256="1ldl7rza58fzfbqidr1kanhfhy744nrsxrm13qdpxirdxx3vji6q"; depends=[boot]; }; + SiZer = derive2 { name="SiZer"; version="0.1-7"; sha256="068xaawc9vhi7a0b52jfq5r81kwnxn2wnqar1b35wwckmsd40b20"; depends=[boot]; }; SigOptR = derive2 { name="SigOptR"; version="0.0.1"; sha256="1sylchhhz6kx4r8jx95cvsmjsacjh8pin7acf2fyw2a4nlx9r1a6"; depends=[httr jsonlite]; }; SigTree = derive2 { name="SigTree"; version="1.10.6"; sha256="18gh7azjr979ijc2y4yyskj24ay697rw3j7znc5p4a63s4vpxr9w"; depends=[ape MASS phyext2 phylobase phyloseq RColorBrewer vegan]; }; SightabilityModel = derive2 { name="SightabilityModel"; version="1.3"; sha256="0rgv5735y07yyv5y9c3flzha97ykn34ysmzy6as1z94hqfr4w746"; depends=[]; }; + Signac = derive2 { name="Signac"; version="0.2.4"; sha256="1szc4a4g8c2qrjm3i597byw0sj2sksvj2w7fr93d6n5w1y251260"; depends=[BiocGenerics Biostrings BSgenome data_table dplyr future future_apply GenomeInfoDb GenomicFeatures GenomicRanges gggenes ggplot2 ggseqlogo IRanges irlba Matrix patchwork pbapply Rsamtools S4Vectors Seurat tidyr zoo]; }; SignifReg = derive2 { name="SignifReg"; version="2.1"; sha256="01h6cz602m9jpnkpgbr5smmn3xp5aw5h5xl32kyhxqhybg75j6fj"; depends=[]; }; Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="4.4"; sha256="14qdz49gyjaja6yj053iv998mrib3nbzzf02g30sl5y0cxkpmnd1"; depends=[Deriv MASS]; }; Sim_PLFN = derive2 { name="Sim.PLFN"; version="1.0"; sha256="1jmsydhpfv2z9cr99hfy8cairhkkxpwk4wnz1adixwxazkn7qfah"; depends=[DISTRIB FuzzyNumbers]; }; - SimBIID = derive2 { name="SimBIID"; version="0.1.3"; sha256="1vbib8ajpph35ahyv0x431y9xscinnvzvjzwhw9l810n1agbfay9"; depends=[coda dplyr ggplot2 mvtnorm purrr RColorBrewer Rcpp RcppArmadillo RcppXPtrUtils tibble tidyr]; }; + SimBIID = derive2 { name="SimBIID"; version="0.1.4"; sha256="1kqa1bm0f9kx7nr936hhpsi6hjjb3mlppxycwwi5pmzv9snm83hg"; depends=[coda dplyr ggplot2 mvtnorm purrr RColorBrewer Rcpp RcppArmadillo RcppXPtrUtils tibble tidyr]; }; SimComp = derive2 { name="SimComp"; version="3.3"; sha256="04qkis20zk0z42bv4nznffqlpwby0y0ij27gj4sa0ha864pg0hi5"; depends=[mratios multcomp mvtnorm]; }; SimCop = derive2 { name="SimCop"; version="0.7.0"; sha256="1yrdy77a9h14v92c63ng8phi2ig73wy4xjjdb75322grc0bd3jq6"; depends=[quadprog]; }; SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.7.0"; sha256="10snjwrh95407iracbc52b5cvr3sp2539rrjp7fw63q50pjl285v"; depends=[evd]; }; @@ -4253,8 +4266,8 @@ in with self; { SimMultiCorrData = derive2 { name="SimMultiCorrData"; version="0.2.2"; sha256="0brszbqxf40y65xp96c5hp7hhvz3gv0xlg93r5ik8qdh0bn0y1sw"; depends=[BB GenOrd ggplot2 Matrix nleqslv psych triangle VGAM]; }; SimPhe = derive2 { name="SimPhe"; version="0.2.0"; sha256="01kzypahw41jk8s2c92h0k9w32yaicis07wb6k8qlqcmv0zj8xry"; depends=[]; }; SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; }; - SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.3.0"; sha256="1ppms2cirdhm8lsfl74mfc1f9zwc7lin6r5xs649czqlj63yzk4i"; depends=[dplyr kinship2]; }; - SimRVSequences = derive2 { name="SimRVSequences"; version="0.2.3"; sha256="188sd1xyi2iaw5ra23wa2ilz5zi7vl6vjcswfcpn49r2yw5i9w4n"; depends=[dplyr intervals kinship2 magrittr Matrix reshape2 rlang SimRVPedigree]; }; + SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.4.4"; sha256="0z7wwwl814bwaijkmg9wcdj5xisiamc9yqypmk0hzj950569aj8p"; depends=[dplyr kinship2]; }; + SimRVSequences = derive2 { name="SimRVSequences"; version="0.2.4"; sha256="0j10dr8mc0jmwixjvzfc20l50z2ismga142cq935jj3cd24j19b6"; depends=[dplyr intervals kinship2 magrittr Matrix reshape2 rlang SimRVPedigree]; }; SimReg = derive2 { name="SimReg"; version="3.0"; sha256="188q399xcrvjw7y7lf3hfbb7x0m0hc4zaf9i1w2c4xzswmvljd8r"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; }; SimSeq = derive2 { name="SimSeq"; version="1.4.0"; sha256="068gg484w07qb4wajik2s3z79xfj0jg5l4pz69267dxi5kzd9fas"; depends=[fdrtool]; }; @@ -4267,7 +4280,6 @@ in with self; { SimplicialCubature = derive2 { name="SimplicialCubature"; version="1.2"; sha256="1g7i31naczqf1hxmk1h5y9gq36rdfhf4al9xvwjgi9bj9zhfg3qp"; depends=[]; }; SimplifyStats = derive2 { name="SimplifyStats"; version="2.0.2"; sha256="0jv6yh6nh26wy18b4k3bi6pxhajmm2jw4hxxrjkpznn14c173qz5"; depends=[assertthat broom dplyr moments tibble]; }; Simpsons = derive2 { name="Simpsons"; version="0.1.0"; sha256="1pm6wga1yxc35zgz72plzq23d3l4bbzfdvhszdxmkn1pkk64h8ms"; depends=[mclust]; }; - SimuChemPC = derive2 { name="SimuChemPC"; version="1.3"; sha256="06sxknaykikcgbw7qbbw1risg0sbaisb68vhfd7cl6sg0327dznk"; depends=[rcdk]; }; SinIW = derive2 { name="SinIW"; version="0.2"; sha256="1z7rcjy0i09a9hjpjj1x8i46lv042l20lvb6b0pnsky2sx3v78pd"; depends=[fdrtool pracma]; }; SingleCaseES = derive2 { name="SingleCaseES"; version="0.4.3"; sha256="05bd03ka6qxmq8ls9w0nfklya3qay90s3i0iqjpcd6id4g8cz2kb"; depends=[dplyr magrittr purrr rlang tidyr tidyselect]; }; SitesInterest = derive2 { name="SitesInterest"; version="1.0"; sha256="06l6i6jnzwj683cvd9a9dg4nlb1wy1v3wb561y97a25bikm3mfy6"; depends=[plotrix]; }; @@ -4309,17 +4321,17 @@ in with self; { SoundexBR = derive2 { name="SoundexBR"; version="1.2"; sha256="0chc332v3wcz30v70yvdxhvcfdmvf4fj193cn00gl899xfxal89p"; depends=[]; }; SourceSet = derive2 { name="SourceSet"; version="0.1.3"; sha256="159kg4pna24yihkghxc2k5f56dqk8aypxcmj1whgnajmgab29ry1"; depends=[graph gRbase gtools igraph plyr progress reshape2 scales]; }; SoyNAM = derive2 { name="SoyNAM"; version="1.6"; sha256="1vwl2mknk6x0sgk0baxsvb6xy4i7mf2ypkmc9lx869nakrx1ypah"; depends=[lme4 NAM reshape2]; }; - SpATS = derive2 { name="SpATS"; version="1.0-10"; sha256="0h1xf01kar69nr96vf1y19rd543fzysv391z992mqrr98dzws9dc"; depends=[data_table fields plot3Drgl spam]; }; + SpATS = derive2 { name="SpATS"; version="1.0-11"; sha256="00xw6xz764sqlfr7pw2mxzxvm4i1p76n9h8wz62n0p3afn1d1glm"; depends=[data_table fields plot3Drgl spam]; }; SpNMF = derive2 { name="SpNMF"; version="0.1.1"; sha256="1xybxx47i3ww5d7chwl38xc48fbsclgyxcki8h85c6dkm49dxy8i"; depends=[NMF]; }; SpNetPrep = derive2 { name="SpNetPrep"; version="1.1"; sha256="1y3j7mwjxv69lrgqvi8kxvhlmdyr8v7gbg17741008xb32kgma8h"; depends=[leaflet maptools prodlim raster rgdal shiny shinythemes sp spatstat]; }; SpaCCr = derive2 { name="SpaCCr"; version="0.1.0"; sha256="0qm1fr6nnax3i1i77fi73x1z8db557avh6kivs0nskb1dfj8ri4m"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo tidyr]; }; SpaDES = derive2 { name="SpaDES"; version="2.0.4"; sha256="1ihxkr2c7rfpb02chmdv393nfc1id1cg7lq8pbb64xm5vdpyj0bv"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; }; SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.2"; sha256="0z1n48kfwy460zfam88ayfiq8sbzvnf6cpkasr74nykr4fabs5ha"; depends=[devtools magrittr miniUI reproducible rstudioapi shiny SpaDES_core stringi]; }; - SpaDES_core = derive2 { name="SpaDES.core"; version="0.2.7"; sha256="0m2yn907p884xq6da75ji87r5p3zzygkwxa50isz8lgnp31xmgpy"; depends=[backports codetools crayon data_table DiagrammeR dplyr fastdigest fpCompare future httr igraph lubridate quickPlot R_utils raster RCurl reproducible stringi whisker]; }; + SpaDES_core = derive2 { name="SpaDES.core"; version="1.0.0"; sha256="1bz9j787nynjxfa3dnv0ij39bsf5qq9kmqrhlas1sx9qvvzsnfaz"; depends=[backports crayon data_table dplyr fastdigest fpCompare igraph lubridate quickPlot R_utils raster RCurl reproducible rlang stringi whisker]; }; SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.3.4"; sha256="0iz6mnppp2p036b7z0rcv0hbcb3m1s4262ws797qpgxqj22d0hpy"; depends=[backports bit checkmate CircStats data_table fastmatch ff ffbase fpCompare magrittr quickPlot raster Rcpp reproducible rgeos sp]; }; SpaTimeClus = derive2 { name="SpaTimeClus"; version="1.0"; sha256="1l204b8yd11pxwcb026xy39f4lps4sqk6mml8cybnjch8clk9djc"; depends=[Rcpp RcppArmadillo]; }; SpadeR = derive2 { name="SpadeR"; version="0.1.1"; sha256="0iy2rkq4vvps1a73kqq37zpsyl4pvl3vh07dwvpfhvp7f8nxbx99"; depends=[]; }; - SparkR = derive2 { name="SparkR"; version="2.4.4"; sha256="181qys7whk061bk8gl8ah34g4wk3a0lw40dnx18nj8yf5iq6yvzd"; depends=[]; }; + SparkR = derive2 { name="SparkR"; version="2.4.5"; sha256="1bdq2qalirrd018hwj95ab1cmg10mp8innrdgc9m3xcwzdc75nrv"; depends=[]; }; SparseBiplots = derive2 { name="SparseBiplots"; version="3.5.0"; sha256="00ynx0cr543zyx9b633cbdalza9wmfgbvvgvr8b6s5r71lpjii8f"; depends=[sparsepca]; }; SparseDC = derive2 { name="SparseDC"; version="0.1.17"; sha256="0gsfj8631s67a0r9qjjll4rbb57nzk5fwm5bbggvf0027b9hk0pp"; depends=[]; }; SparseFactorAnalysis = derive2 { name="SparseFactorAnalysis"; version="1.0"; sha256="0lgfvydxb86r5hks1mf0p0yhgpx8s8fbkc3q6dimc728rw26qcv5"; depends=[directlabels ggplot2 MASS proto Rcpp RcppArmadillo truncnorm VGAM]; }; @@ -4332,10 +4344,10 @@ in with self; { SpatEntropy = derive2 { name="SpatEntropy"; version="0.1.0"; sha256="0nk399anjhsdki9cra650ynk6sa0366495470sawxcfs3vxmlzrl"; depends=[spatstat]; }; SpatMCA = derive2 { name="SpatMCA"; version="1.0.1.0"; sha256="1sjrm1md4lmhyq1yw3np4llkgdskw3mk667jr0k3isjmr6z88gxa"; depends=[fields MASS Rcpp RcppArmadillo RcppParallel]; }; SpatPCA = derive2 { name="SpatPCA"; version="1.2.0.1"; sha256="0vqajxcjjdp9dv53w0s4d1z63yrnzvs90h7cqs0f6daaihyvm130"; depends=[Rcpp RcppArmadillo RcppParallel]; }; - SpatialAcc = derive2 { name="SpatialAcc"; version="0.1-3"; sha256="0nx3x4jiiwwa2983lbszpm22xgc41gcdcm967h1p9a4xz2a6wgcs"; depends=[]; }; SpatialBall = derive2 { name="SpatialBall"; version="0.1.0"; sha256="09iy1smfqnb0rd2s9a1wqgscb1plwcwwph6a8215l4zrs6svszv2"; depends=[dplyr ggplot2 hexbin lubridate RColorBrewer]; }; SpatialEpi = derive2 { name="SpatialEpi"; version="1.2.3"; sha256="0d0kyh591m3hvalqpbj67pynpb9v00kdx1idc5mw4p9hsbfs10xm"; depends=[maptools MASS Rcpp RcppArmadillo sp spdep]; }; SpatialEpiApp = derive2 { name="SpatialEpiApp"; version="0.3"; sha256="0svnnzqshk08s58ishy8xhqch44mb5svgfphkvpgysdd68dgaysr"; depends=[dplyr dygraphs ggplot2 htmlwidgets knitr leaflet mapproj maptools RColorBrewer rgdal rgeos rmarkdown shiny shinyjs SpatialEpi spdep xts]; }; + SpatialExtremes = derive2 { name="SpatialExtremes"; version="2.0-8"; sha256="0r2byz5xxc46zqnigdax28q7446ibmzmsmi10lmm2hdks3ml6sl3"; depends=[fields maps]; }; SpatialFloor = derive2 { name="SpatialFloor"; version="1.1.0"; sha256="07mwgcvkkq478l6wxvrdjs9d578x0kgs5xy86lgy5my0xqfcv6y8"; depends=[blocksdesign fields reshape2 taRifx]; }; SpatialGraph = derive2 { name="SpatialGraph"; version="1.0-2"; sha256="0cwswa5g3a6ng8qkwi04jz9pma4i0c16m7jpq6z3djzjin0znyk2"; depends=[igraph rgeos shape sp splancs]; }; SpatialKDE = derive2 { name="SpatialKDE"; version="0.5.0"; sha256="15v8msvmpy72d0vjrra1rmkkxn7pm11bngr3liw2n43lwkh19l9i"; depends=[dplyr glue magrittr raster Rcpp rlang sf]; }; @@ -4346,44 +4358,42 @@ in with self; { SpatialTools = derive2 { name="SpatialTools"; version="1.0.4"; sha256="0jgbrzsx2klvihv65y1ycqyr8awp5kqqz4qwfyfibx3b56lzna1q"; depends=[Rcpp RcppArmadillo spBayes]; }; SpatialVS = derive2 { name="SpatialVS"; version="1.1"; sha256="1xghfiz9wmmx11ssms7zjy3ggkjmc6kkbdwp3v5wjwpwapafzdk3"; depends=[fields MASS nlme]; }; SpatialVx = derive2 { name="SpatialVx"; version="0.6-5"; sha256="1n2d686aa6y8dy1y78i6ncl9abiafj96prfgkgcv8w8jmg0d23z5"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; }; - SpatioTemporal = derive2 { name="SpatioTemporal"; version="1.1.9.1"; sha256="1i9w1gb4klwfwas934lw0a01pyp87y7ydrlk05xgd52i4j1y9wcn"; depends=[MASS Matrix]; }; - Spbsampling = derive2 { name="Spbsampling"; version="1.3.1"; sha256="0k3c1db19ngqlaxc2842gfls5936hb0vb6x0za3f3hcdpd7b5mlc"; depends=[Rcpp RcppArmadillo]; }; + Spbsampling = derive2 { name="Spbsampling"; version="1.3.2"; sha256="1wggpxdij10fw5591kqyzzckn797g0ki66y1frcnnk7fjwqyl61r"; depends=[Rcpp RcppArmadillo]; }; SpecDetec = derive2 { name="SpecDetec"; version="1.0.0"; sha256="1940pl4vm1kzszq0hwhqkwbk1xmrimjdf03acpdndy089mdg9avc"; depends=[abind]; }; SpecHelpers = derive2 { name="SpecHelpers"; version="0.2.7"; sha256="1v3v717ah2fkx9225860dwppdf5m6nnnaaa4iwmj30rn17nqr4jh"; depends=[gsubfn splancs]; }; - SpeciesMix = derive2 { name="SpeciesMix"; version="0.3.4"; sha256="0d6hfmzxqcvg4fcvpsfxx36k95fwkws4rlylrixikndj2fncgwb5"; depends=[MASS numDeriv]; }; - SpecsVerification = derive2 { name="SpecsVerification"; version="0.5-2"; sha256="0dnya9mzkf48clp51jrnkz6lc4fps38nn3lap7n2wcp3dvbvdycg"; depends=[Rcpp RcppArmadillo]; }; + SpecsVerification = derive2 { name="SpecsVerification"; version="0.5-3"; sha256="1v76lilyj65f04881yw19v0qi7n08ysdnr7sc4hf5d8wnmvdh3v3"; depends=[Rcpp RcppArmadillo]; }; SpectralMap = derive2 { name="SpectralMap"; version="1.0"; sha256="15689023k9jzg3s7bx5m97dmn00z876amqhxsxksy8n8wf09wr57"; depends=[fields scatterplot3d]; }; - Spectrum = derive2 { name="Spectrum"; version="1.0"; sha256="0ayvzkbbklzvnz3vd6xknsgjw9avp7k0bd4hqz0rkmdfl30jjash"; depends=[ClusterR diptest ggplot2 Rfast]; }; + Spectrum = derive2 { name="Spectrum"; version="1.1"; sha256="0n38d360azkck6vvhr771zsh0gbvd9qsf9ygg5r18vhz0pb1xcfw"; depends=[ClusterR diptest ggplot2 Rfast]; }; SphericalCubature = derive2 { name="SphericalCubature"; version="1.4"; sha256="14xrxhmhavz82rcixnyharnbrvdzs6rh7gbxihaxh431d90w2q3k"; depends=[abind cubature mvmesh SimplicialCubature]; }; SphericalK = derive2 { name="SphericalK"; version="1.2"; sha256="18py4ylm10s75pihjvcy7w948379zy9l9azriw7g7pyp7px29wda"; depends=[]; }; - SplitReg = derive2 { name="SplitReg"; version="1.0.1"; sha256="0gifj5jk88xyda7sb7l0wbpx86gcj7d4yx2mfljlm882yr0ic7aa"; depends=[Rcpp RcppArmadillo]; }; - SplitSoftening = derive2 { name="SplitSoftening"; version="2.0-0"; sha256="0nlli8nap6ilb5ns1xavyb06nhj2dlf4p0gajmsgrz32s2ljhr8s"; depends=[]; }; + SplitReg = derive2 { name="SplitReg"; version="1.0.2"; sha256="1s012qldrsq8rpfpzf7kyd7631b65zai269x53xcaqn75r5ssh3f"; depends=[Rcpp RcppArmadillo]; }; + SplitSoftening = derive2 { name="SplitSoftening"; version="2.0-1"; sha256="0jk46ymgkjh8jg9b9zzn9490cq92fzchvi2yzqiwisww0k15xlvb"; depends=[]; }; SportsAnalytics = derive2 { name="SportsAnalytics"; version="0.2"; sha256="1vb080ak1mfvr6d0q9i3r8hd547ba80bavjdcri0gclqqcjf1ach"; depends=[]; }; - SqlRender = derive2 { name="SqlRender"; version="1.6.3"; sha256="08w40d3cnnqdw11i4ycr11m3xn2a5gg7blqgmdn336dlhqsc9mdc"; depends=[rJava]; }; + SqlRender = derive2 { name="SqlRender"; version="1.6.4"; sha256="14vl18295fg4wmk6j7dgjx85inbyix7zs25j81g88q4q93448sax"; depends=[rJava]; }; Sstack = derive2 { name="Sstack"; version="1.0.1"; sha256="137vsas2kw3l37c141g51sgx0j6z8ys6hbxjmsdymz1fxsjr4adg"; depends=[doParallel dplyr foreach randomForest]; }; StAMPP = derive2 { name="StAMPP"; version="1.5.1"; sha256="0yyssscx3l4csban66gb4q35h37gf7pqvvycfsy56n96pnnlrgkf"; depends=[adegenet doParallel foreach pegas]; }; StMoMo = derive2 { name="StMoMo"; version="0.4.1"; sha256="1c4v2gjipq1y4crc6bqvz2x5c02bl10mh9jacg8dqb2dffsh5y44"; depends=[fanplot fields forecast gnm MASS RColorBrewer reshape2 rootSolve]; }; StMoSim = derive2 { name="StMoSim"; version="3.1.1"; sha256="1y4lnbpgdza6r6w3q161nlmg8775g3zv323amcwxcj41r4v41p96"; depends=[Rcpp RcppParallel]; }; StVAR = derive2 { name="StVAR"; version="1.1"; sha256="0wz5f5i9927fs1s8yczwqs022k912220m28l1sv5f0r081iv656i"; depends=[ADGofTest matlab MCMCpack numDeriv]; }; + StabilizedRegression = derive2 { name="StabilizedRegression"; version="1.0"; sha256="11hfq13b5rc1jj832msrfb0f3fsklx4clp72aqxfccw0z0n8mdq0"; depends=[corpcor ggplot2 ggrepel glmnet MASS R6]; }; StableEstim = derive2 { name="StableEstim"; version="2.1"; sha256="0agi3bfp1xy5pfxxb9ib6xn434agmplgn7kg47nhbh47vf57vang"; depends=[fBasics MASS Matrix numDeriv stabledist testthat xtable]; }; Stack = derive2 { name="Stack"; version="2.0-1"; sha256="09fgfhw9grxnpl5yg05p9gvlz38iw4prns1jn14nj3qx01k5rnxb"; depends=[bit ff ffbase plyr stringr]; }; StagedChoiceSplineMix = derive2 { name="StagedChoiceSplineMix"; version="1.0.0"; sha256="1008gm6zv5k8lpv0qg42qjriajmx0n4kshjh76mvx91dpi788ivh"; depends=[plyr]; }; StakeholderAnalysis = derive2 { name="StakeholderAnalysis"; version="1.2"; sha256="164mah8h8izxaqp8hc43l6mlnf95pydkcx2laqrlqr9b0bybadxb"; depends=[]; }; - StanHeaders = derive2 { name="StanHeaders"; version="2.21.0-1"; sha256="0gqdp5galy3fgrx9c7ks5hlcla76idfp4awc40xj03wnya51952f"; depends=[RcppEigen]; }; + StanHeaders = derive2 { name="StanHeaders"; version="2.19.2"; sha256="0cmk0fzczx7dcywcw1dhm6gfq84qlsx77qrsk4z3bf3dhr4bznam"; depends=[]; }; StandardizeText = derive2 { name="StandardizeText"; version="1.0"; sha256="0s267k2b109pcdiyd26gm4ag5afikrnnb55d3cs6g2fvzp744hfp"; depends=[]; }; Stat2Data = derive2 { name="Stat2Data"; version="2.0.0"; sha256="1fpp3b4k7x915a9wkpyj4dvvqp0wz7c3lpbh154vrxrdsr712z0k"; depends=[]; }; StatCharrms = derive2 { name="StatCharrms"; version="0.90.94"; sha256="16056gd3wx5qcm9bnrl8hk8dk85j9ikan2dz4acpsfhpga80vp0n"; depends=[cairoDevice car clinfun coxme gWidgets gWidgetsRGtk2 lattice multcomp nlme R2HTML RGtk2 RSCABS survival]; }; - StatDA = derive2 { name="StatDA"; version="1.7"; sha256="1hsy4aivd5ga2zj65hr2c5cn9qgjnhs123qqyg6q959vsjxzp0i0"; depends=[cluster e1071 geoR MASS MBA mgcv rgl robustbase sgeostat xtable]; }; + StatDA = derive2 { name="StatDA"; version="1.7.4"; sha256="1ld7fx1lip54n24r2d9zvd4hri3w02vd174bdi8pi9j5n8xpxl02"; depends=[cluster e1071 geoR MASS MBA mgcv rgl robustbase sgeostat sp xtable]; }; StatDataML = derive2 { name="StatDataML"; version="1.0-26"; sha256="1lcckapbhqdbg6alnhm2yls66lnkxnxamdlzx6pbfqv1dhsy36gf"; depends=[XML]; }; StatMatch = derive2 { name="StatMatch"; version="1.3.0"; sha256="1ms8qmxgpfa9sk7kl6hpcal14xxn7i84h662va2n045w7p0qmcjw"; depends=[clue lpSolve proxy RANN survey]; }; StatMeasures = derive2 { name="StatMeasures"; version="1.0"; sha256="1bnbz803xx8kqhy1cx545b35si6f10za0mp5z82qfvd4kv9a9izz"; depends=[data_table]; }; StatPerMeCo = derive2 { name="StatPerMeCo"; version="0.1.0"; sha256="1nm6brlj6h7jx8nqagrfk294ay3pfmkiizabwlb87qfnsfwchpk3"; depends=[]; }; StatRank = derive2 { name="StatRank"; version="0.0.6"; sha256="14d8v3bp8vgksi6q0mxajwd9s8zi6lns3qwi1vcr5xp9rjp4n6iy"; depends=[ggplot2 plyr truncdist]; }; SteinIV = derive2 { name="SteinIV"; version="0.1-1"; sha256="1bm4lc7g9h9jkb1dpzb84289bwxcywp0a8vylv6ipvhiqbqk5d95"; depends=[]; }; - SteinerNet = derive2 { name="SteinerNet"; version="3.0.1"; sha256="1jkvv0hsj85i1zfr1bmdsrbwgl11mxpfci3z7997m5vvb5fb5cxn"; depends=[igraph]; }; Stem = derive2 { name="Stem"; version="1.0"; sha256="1fr02mi5qyxbqavdh2hg8ggw4nfjh3vs7g0vh834h6y0v53l71r5"; depends=[MASS mvtnorm]; }; StempCens = derive2 { name="StempCens"; version="0.1.0"; sha256="11gspjrcl6yiyr19hankan5mcxipfsdkhha6nsiybs1chg5wx6f4"; depends=[distances ggplot2 gridExtra Matrix MCMCglmm mvtnorm optimx sp spTimer ssym tmvtnorm]; }; - StepReg = derive2 { name="StepReg"; version="1.3.4"; sha256="1fqvz9b2mh1i8zlqnpxfqygydh15y145wszdcvijcbgn5albkl7x"; depends=[Rcpp RcppEigen]; }; + StepReg = derive2 { name="StepReg"; version="1.4.0"; sha256="0lbizly4s4zh1ykfdabrc8145bw7vkgh24qb1q5yp0pahfiyb85p"; depends=[Rcpp RcppEigen ResourceSelection statmod]; }; StepSignalMargiLike = derive2 { name="StepSignalMargiLike"; version="2.6.0"; sha256="0j85lvs2bljfhf482r31sq3xgk8l73hcw22wgxxp8z8nla38cwf9"; depends=[Rcpp]; }; StepwiseTest = derive2 { name="StepwiseTest"; version="1.0"; sha256="1fdm4s9l6grgd45r98ybbsh40rnmnn16c0id6lv28cpmssi0iphi"; depends=[Rcpp RcppArmadillo]; }; StereoMorph = derive2 { name="StereoMorph"; version="1.6.3"; sha256="0sr8i6hq9iir2f717yvm5kdda047hamsqcrl553jjzzcbxg0y5m1"; depends=[bezier jpeg MASS png Rcpp rjson shiny svgViewR tiff]; }; @@ -4393,9 +4403,9 @@ in with self; { StratSel = derive2 { name="StratSel"; version="1.3"; sha256="0hd6q8s8aiymcd33kv0gd0a4wzr86xxdzwn18jgpyk9q8pmg8gvl"; depends=[Formula MASS memisc mnormt pbivnorm]; }; Strategy = derive2 { name="Strategy"; version="1.0.1"; sha256="0phja1r0qfvcswvw5w1x6ny86p84wkqb029fdqgw10djdm9xp0f2"; depends=[xts zoo]; }; StratifiedBalancing = derive2 { name="StratifiedBalancing"; version="0.3.0"; sha256="0pklnm0q0imdhyzhwyb4i0j441dkk4k6qqlx8d4q2xnl62drqnvv"; depends=[bnlearn plyr]; }; - StratifiedMedicine = derive2 { name="StratifiedMedicine"; version="0.2.1"; sha256="0g7r6jz9gqy66784sygg20l0gyikqmkm69hssyqdsvhgslwmdq5r"; depends=[dplyr ggparty ggplot2 glmnet mvtnorm partykit ranger survival]; }; + StratifiedMedicine = derive2 { name="StratifiedMedicine"; version="0.2.2"; sha256="1dy78bx865v0p00cdvf9jx28wp7y8j15xinz7vy4j3w8ymalns8y"; depends=[dplyr ggparty ggplot2 glmnet mvtnorm partykit ranger survival]; }; StratifiedRF = derive2 { name="StratifiedRF"; version="0.2.2"; sha256="0a5djia6xacs17nnr5knr1acwzicrffz73q9nvnhdmihazq8v27d"; depends=[C50 dplyr]; }; - StratigrapheR = derive2 { name="StratigrapheR"; version="0.0.7"; sha256="0650qrip02r079zqfaii9097p2d8dm90356v0f3gialg140rsbys"; depends=[diagram dplyr shiny stringr XML]; }; + StratigrapheR = derive2 { name="StratigrapheR"; version="1.0.0"; sha256="1pav5zgq0h1fm15sd3q8xiyd5dv4xz06m90r99i1n5348xvg33cq"; depends=[diagram dplyr shiny stringr XML]; }; StreamMetabolism = derive2 { name="StreamMetabolism"; version="1.1.2"; sha256="1sv30i7armk7jhxg5x9lh0r9qq3xixn1k2h0q89halkh1yraal8a"; depends=[chron maptools zoo]; }; StressStrength = derive2 { name="StressStrength"; version="1.0.2"; sha256="1fq26bzmwsk4nzz9bgasyxz9alw8x2ssahz67mham7vw483w79pd"; depends=[]; }; String2AdjMatrix = derive2 { name="String2AdjMatrix"; version="0.1.0"; sha256="058r30kjjna02nmd6ngqfcnn1yk5390i20xvl6qb5qk3bcp2wmxn"; depends=[stringr]; }; @@ -4403,9 +4413,9 @@ in with self; { StructFDR = derive2 { name="StructFDR"; version="1.3"; sha256="1y0wj7y36iq0lznc4qpsr2yis3an34iilpabkaxxmas2q4abg0qb"; depends=[ape cluster dirmult matrixStats nlme]; }; StructureMC = derive2 { name="StructureMC"; version="1.0"; sha256="1pj3inznw6flvmk22dzjcfjnwjhx7r98ngckz0axf6ipp3hb85jn"; depends=[MASS matrixcalc]; }; SubCultCon = derive2 { name="SubCultCon"; version="1.0"; sha256="08q6k4nsv3gl5qk87s87smdg047yc2a4i7kg0fp08i7q7h62jkvz"; depends=[]; }; - SubTite = derive2 { name="SubTite"; version="3.0.0"; sha256="1kv5083zfxla4v1y7zhkd2rhld8mhmnilkz78q26qp121qqbf93r"; depends=[Rcpp RcppArmadillo]; }; + SubTite = derive2 { name="SubTite"; version="3.0.1"; sha256="12wbipx024p1wrnvjvv82armji6ryzv15i8yry6kaf49zp6wfxiq"; depends=[Rcpp RcppArmadillo]; }; SubVis = derive2 { name="SubVis"; version="2.0.2"; sha256="1nb3zgm6i5lwfwdrn8mk3wkg8a4ldfvs27ai8v46l4316qc1fa9p"; depends=[Biostrings shiny]; }; - SubgrPlots = derive2 { name="SubgrPlots"; version="0.1.2"; sha256="1hiaa4zwk3ll6ans1v7r76pmzbq7j8mhw72s30j7mhgkkkqpnr12"; depends=[alluvial circlize colorspace diagram dplyr geoR ggplot2 ggrepel gridBase gridExtra plyr polyclip scales shape sp survival survRM2 UpSetR VennDiagram]; }; + SubgrPlots = derive2 { name="SubgrPlots"; version="0.1.3"; sha256="1bi5zndkpgvyk563i0jdfrw73kkpa6zi3yx922dv90w6bdb9kvl2"; depends=[alluvial circlize colorspace diagram dplyr ggplot2 ggrepel gridBase gridExtra plyr polyclip scales shape sp survival survRM2 UpSetR VennDiagram]; }; SubgrpID = derive2 { name="SubgrpID"; version="0.11"; sha256="1by23gdkbls7l5xa9nl055nbm0d3138pmfmasqmcy42h62wf7dw6"; depends=[AIM ggplot2 glmnet Matrix rpart survival]; }; SubpathwayGMir = derive2 { name="SubpathwayGMir"; version="1.0"; sha256="1rw94idhbnaszr2xv1wgnjcxlnxkml912pvmqh2a1nqpwca5mscy"; depends=[igraph XML]; }; SubpathwayLNCE = derive2 { name="SubpathwayLNCE"; version="1.0"; sha256="051csjavr9549y54yirfdn266i7swsvpbcakhziyz4sl4afwx5kl"; depends=[BiasedUrn graph igraph RBGL]; }; @@ -4416,14 +4426,15 @@ in with self; { SunterSampling = derive2 { name="SunterSampling"; version="1.0.1"; sha256="0qfld3j8xlpgp7c58zqw6gzm38m4d740lvdj5vmcflfcc6ja98sf"; depends=[]; }; SupMZ = derive2 { name="SupMZ"; version="0.2.0"; sha256="1n81wqacrpk5x6i1pd1zsjivv2jk41743kg1h7gnp0rb3k58vp7r"; depends=[dplyr magrittr]; }; SuperExactTest = derive2 { name="SuperExactTest"; version="1.0.7"; sha256="1ysfsdzbkldcn7hzxhqikf5h2h9747xhfrirqgr8xx8q81wq989s"; depends=[]; }; - SuperGauss = derive2 { name="SuperGauss"; version="1.0.1"; sha256="0pkk8aaghkrh87g6ahikngp6hahaxwhr8i9vz30vv2bzxpgba54b"; depends=[fftw Rcpp RcppEigen]; }; + SuperGauss = derive2 { name="SuperGauss"; version="1.0.2"; sha256="08nrw96y7b04a9xpyklcnqgisbjxd35pqffpay6cr67zxx0zg81i"; depends=[fftw Rcpp RcppEigen]; }; SuperLearner = derive2 { name="SuperLearner"; version="2.0-26"; sha256="10b0fh71ky92mp0ydi81s6zm3sn47k5agppcg4zpgqmailn94qj4"; depends=[cvAUC nnls]; }; - SuperPCA = derive2 { name="SuperPCA"; version="0.2.0"; sha256="1g2qf2y83clmjx327b9yk6bkx4l7rm0hj0sjvia2fll24m4hxcjz"; depends=[fBasics glmnet MASS matlab matlabr Matrix matrixStats pracma psych R_matlab RSpectra spls timeSeries]; }; + SuperPCA = derive2 { name="SuperPCA"; version="0.3.0"; sha256="139nym0szr7l7hq3xy60jwpx61896h5g7vrklxy7098w53iczyj4"; depends=[fBasics glmnet MASS matlab matlabr Matrix matrixStats pracma psych R_matlab RSpectra spls timeSeries]; }; SuperRanker = derive2 { name="SuperRanker"; version="1.1.1"; sha256="1yiklw9zk7yw0xz5g3lmyl5lv325fnysimdwbxa37nyj6qdfv0ls"; depends=[prodlim Rcpp]; }; SuperpixelImageSegmentation = derive2 { name="SuperpixelImageSegmentation"; version="1.0.1"; sha256="15d611ik6qg0602n6yk34a1pgfciv42nzd8qaarmxnqqrn8i584n"; depends=[ClusterR OpenImageR R6 Rcpp RcppArmadillo]; }; + Superpower = derive2 { name="Superpower"; version="0.0.3"; sha256="0hwlgscygjcqiclgac97ffcmw081g91rvqbd2pj0z0kijz7g597x"; depends=[afex dplyr emmeans ggplot2 gridExtra magrittr MASS mvtnorm reshape2]; }; SuppDists = derive2 { name="SuppDists"; version="1.1-9.5"; sha256="1i3iq12a5x5k49ac01mikzcrrq9gc148xq3m08h4xm07bha6f2v8"; depends=[]; }; SurfaceTortoise = derive2 { name="SurfaceTortoise"; version="1.0.1"; sha256="0q0swp0xs3lmfx2dxffqrna2spyr2l9ka0zbhmw8nkgb1w5rq5q6"; depends=[gstat raster rgeos sp]; }; - Surrogate = derive2 { name="Surrogate"; version="1.5"; sha256="104k7fgbl7aqgapm6qrkx0vhlfvbwl5gqdllrrks74ws7hbmmfgd"; depends=[extraDistr ks lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms rootSolve survival]; }; + Surrogate = derive2 { name="Surrogate"; version="1.6"; sha256="0xd8xjqn64ppg4qq7nhibws7k68gp6d21x1385hd3qcav8bq2hgq"; depends=[extraDistr ks lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms rootSolve survival]; }; SurrogateOutcome = derive2 { name="SurrogateOutcome"; version="1.0"; sha256="0x91bmr4n9zn9cc72s91fzzsqhzhrkfpcbcla00gcsfmbjqz3997"; depends=[survival]; }; SurrogateTest = derive2 { name="SurrogateTest"; version="1.1"; sha256="0m6m44vsfdgv47sswi2s8snmypa7s2ppad73fqnvymq8fm2b3yl2"; depends=[survival]; }; SurvBoost = derive2 { name="SurvBoost"; version="0.1.2"; sha256="17av00iwa3kpw0ihrvvynrfcghnq492b5k7n9fxfgf2nily24x2p"; depends=[directlabels ggplot2 mvtnorm plyr Rcpp RcppArmadillo RcppParallel reshape2 survival]; }; @@ -4435,7 +4446,7 @@ in with self; { SurvTrunc = derive2 { name="SurvTrunc"; version="0.1.0"; sha256="0b6s7llljp75agd57lmc1yq5acnfwy113khrfjcbm1l5ply6pz7f"; depends=[survival]; }; Survgini = derive2 { name="Survgini"; version="1.0"; sha256="1gxkdv2j1njbgnwb52vyhz7p2lrcg3hp6sry3kyhp4wkvf6gnhxi"; depends=[survival]; }; SvyNom = derive2 { name="SvyNom"; version="1.1"; sha256="1jym2x6nd9a3y7nk5hflqpy54gs67y4sqqspkvkalf5l2cc64did"; depends=[Hmisc rms survey survival]; }; - SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-5"; sha256="0nmlnvc1vxk68sc5jv3kvnnf5dpqxn4dxzrn06b9sn2bcxfpmkhy"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; + SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-6"; sha256="09xq7jx70qjyhblzh6kc40hdr0636rqqdnbka7m6rawhd8ivp8yz"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; SwimmeR = derive2 { name="SwimmeR"; version="0.1.0.0"; sha256="0979527aaacfq8arp1qh7z3p9crq8x2v90899z2ab0fa6f9n282m"; depends=[dplyr purrr stringr tibble]; }; SwissAir = derive2 { name="SwissAir"; version="1.1.5"; sha256="0lh69924vhyilgn562jqn8m7z4dq3xmdj09501sbs7hbxfaiiyly"; depends=[]; }; SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; }; @@ -4445,10 +4456,10 @@ in with self; { SyncRNG = derive2 { name="SyncRNG"; version="1.3.0"; sha256="0sywfmmy6mq6qsxkxjc67665snn1jds01j3h7ni1200igja139g2"; depends=[]; }; SynchWave = derive2 { name="SynchWave"; version="1.1.1"; sha256="127hllvig8kcs9gr2q14crswzhacv6v2s4zrgj50qdyprj14is18"; depends=[fields]; }; Synth = derive2 { name="Synth"; version="1.1-5"; sha256="1cfvh91nz6skjk8jv04fhwv3ga9kcsfgq3mdy8lx75jkx16zr0pk"; depends=[kernlab optimx]; }; - SynthTools = derive2 { name="SynthTools"; version="1.0.0"; sha256="0izsp1gcch3bb7ssq3w5na5k0nli18mcqkx757icnb32jpy9m3a8"; depends=[dplyr magrittr Rdpack]; }; + SynthTools = derive2 { name="SynthTools"; version="1.0.1"; sha256="19vasz3nnm5vgwqs6g2a5bibmk44br1bxga5zavsx938x3jw9gnd"; depends=[dplyr magrittr Rdpack]; }; T2EQ = derive2 { name="T2EQ"; version="1.1"; sha256="1skkkryw63pfx1xslia1lczb2psja6v6hcbph4isdcksb4l4pcig"; depends=[]; }; TAG = derive2 { name="TAG"; version="0.2.0"; sha256="0s4n2f9x36df1pb5p8n98926lgg9z79fka5r9xqxxsc91h35q9aw"; depends=[DiceKriging doParallel FastGP Matrix mgcv mlegp randtoolbox Rcpp RcppArmadillo]; }; - TAM = derive2 { name="TAM"; version="3.3-10"; sha256="1rkjp5x6wrk1dfspp1imvfals0wvy4w1wb8a5mhfbnilc7vgnlbq"; depends=[CDM Rcpp RcppArmadillo]; }; + TAM = derive2 { name="TAM"; version="3.4-26"; sha256="111d7qkxhwh1lfvldyh9d61pdb5vb6x8lr8n9h95ssvw07vjqvk9"; depends=[CDM Rcpp RcppArmadillo]; }; TANDEM = derive2 { name="TANDEM"; version="1.0.3"; sha256="151rm95q2naw9y58df1lr2qiadnkgfb5j9v47v41bw4iipsmlp4p"; depends=[glmnet Matrix]; }; TAQMNGR = derive2 { name="TAQMNGR"; version="2018.5-1"; sha256="0bf0sgqa53l9y2bhwg2ngiwlcgrmj0nvxchlsmcc8zin388qf4pb"; depends=[Rcpp]; }; TAR = derive2 { name="TAR"; version="1.0"; sha256="0wjh2n9x3yn9by9a6mjvkl96qy7z549g6dsqp7b4d96xwmyqxlbv"; depends=[mvtnorm]; }; @@ -4465,12 +4476,11 @@ in with self; { TDAstats = derive2 { name="TDAstats"; version="0.4.1"; sha256="1zmickqk60vm9rzy67hib835v3c45aqjk441p31vpbvhbiy58nq5"; depends=[ggplot2 Rcpp]; }; TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; }; TDD = derive2 { name="TDD"; version="0.4"; sha256="193y8brybkjsajrbnlx1sdnw1wyyn9rhlm5wvp4aamqhvi8z13vn"; depends=[pracma RSEIS signal]; }; - TDMR = derive2 { name="TDMR"; version="2.1"; sha256="10lx1yksz61byjcwqi9v59pqka0fs5dhrq4qjmp0i2zvn6cgh1zj"; depends=[adabag SPOT testit twiddler]; }; - TDPanalysis = derive2 { name="TDPanalysis"; version="0.99"; sha256="1kyhs4rpkm3gr55l6hrz4xcb9igk95si1m1sp175580k16n885z0"; depends=[plyr]; }; + TDMR = derive2 { name="TDMR"; version="2.2"; sha256="19ljgj5iy41m7rrawzkxkln7acydssk8zm05k3sfb483s8zygwiq"; depends=[adabag SPOT testit twiddler]; }; + TDPanalysis = derive2 { name="TDPanalysis"; version="1.0"; sha256="0kvbsgwl7b9a3hn4d3snajqmynbajd2d8lc1na0hri2cv8qm8x9h"; depends=[plyr]; }; TDboost = derive2 { name="TDboost"; version="1.2"; sha256="0sc9vby4892gm5b5h8gbdl4misqvgbkfp8fms53dk83malxkw1zx"; depends=[lattice]; }; TE = derive2 { name="TE"; version="0.3-0"; sha256="15530a5qjlh74c1qji76j25mm4c59gifp34y066f8j21f70rahfs"; depends=[MASS rainbow]; }; TEAM = derive2 { name="TEAM"; version="0.1.0"; sha256="1yj7fw935rr7fh7h2p4ra8d3ynz5c6b30fqzm1djgav1k84wcin2"; depends=[ggplot2 ks plyr]; }; - TEEReg = derive2 { name="TEEReg"; version="1.1"; sha256="0v5qz3vvmcm3fh16kjb05j1r0yj23r7hrxf2www20ng3dmga5q0f"; depends=[]; }; TELP = derive2 { name="TELP"; version="1.0"; sha256="0wzm3dz0489ha7dd6lkashvvjydck9jw2pavlx9plpksvzr4q9ph"; depends=[arules arulesViz ggplot2 gridExtra RColorBrewer tcltk2 tm wordcloud]; }; TEQR = derive2 { name="TEQR"; version="6.0-0"; sha256="112znsz36jqh3krnr4j05xl70picih8qpmqky2gllgyr8nky39fr"; depends=[]; }; TERAplusB = derive2 { name="TERAplusB"; version="1.0"; sha256="0mshx615awcf2arm39mgw2gzgpyn7a3f767484g7z4nqqlikwpgc"; depends=[]; }; @@ -4489,7 +4499,7 @@ in with self; { TLMoments = derive2 { name="TLMoments"; version="0.7.5"; sha256="0v86rs7f63f59ng9m6lnjgv52czg1xk814flnhz153fjy7y2pidl"; depends=[ggplot2 hypergeo Rcpp]; }; TLdating = derive2 { name="TLdating"; version="0.1.3"; sha256="12lmakk1zd6wqh1318pnl14i7km2hynjn4ymchfjr2bwmp45c1ra"; depends=[gplots Luminescence]; }; TMB = derive2 { name="TMB"; version="1.7.16"; sha256="0lly12hdi99iklwr0vg9xkyhi038w4gncbf895qcwbndmqp0lx44"; depends=[Matrix RcppEigen]; }; - TMDb = derive2 { name="TMDb"; version="1.0"; sha256="0bbcmsv7b3vvskhdjww03gbcgql44vsvyjz2fajy9w2vgkr6ga90"; depends=[httr jsonlite]; }; + TMDb = derive2 { name="TMDb"; version="1.1"; sha256="062n9mi2f9g2xxpnymja57xnpl855d8mwyfwci7a8cq4c7w7avj7"; depends=[httr jsonlite stringi]; }; TNC = derive2 { name="TNC"; version="0.1.0"; sha256="0639wvylmk9mapvmz79ij65g1phv3ylc683awi4pgaf9yfwlmjkn"; depends=[]; }; TOC = derive2 { name="TOC"; version="0.0-4"; sha256="1c16d4wrzir6v3c323sck6r9yz6mv1a70xamlj5ha1ydmfixcza9"; depends=[bit raster rgdal]; }; TOHM = derive2 { name="TOHM"; version="1.3"; sha256="08qwqryy9vdh906k3rhq4csysxlxgki4jjr505shfrxjvnlc662i"; depends=[EQL igraph Matrix nloptr Rmpfr]; }; @@ -4498,13 +4508,12 @@ in with self; { TPD = derive2 { name="TPD"; version="1.1.0"; sha256="1ppj6ppi0lhlz079ygjnwx1l5f36bsi8zax23ssr1w6h4csw748m"; depends=[ggplot2 gridExtra ks mvtnorm]; }; TPEA = derive2 { name="TPEA"; version="3.1.0"; sha256="1yyc3q4dyf4d8m7wi851dnxf3xnvvfnvj28kl8z8py4r4jsb2hfy"; depends=[foreach igraph Matrix MESS RCurl XML]; }; TPES = derive2 { name="TPES"; version="1.0.0"; sha256="00g1limcappjrly93x7xb1llrgaxivmiky3kw40w2fs0303ha3d7"; depends=[]; }; - TPMplt = derive2 { name="TPMplt"; version="0.1.3"; sha256="0y2adbswgd8z3lzy9hi6qx7hm9ns2ky269q83y50ykyg2ms5qjhg"; depends=[directlabels dlm e1071 ggplot2 RColorBrewer rgl rowr VBTree]; }; TPmsm = derive2 { name="TPmsm"; version="1.2.2"; sha256="1ibb3ayd808x3a562qldaww7czmfq1cd1j4g4ch5k7q38jw5x835"; depends=[KernSmooth]; }; TR8 = derive2 { name="TR8"; version="0.9.20"; sha256="01xkjl269q1qlpm8cxpnb64czcv2xhrjjwp3brhxywx07za1q8lq"; depends=[gWidgets gWidgetstcltk plyr rappdirs RCurl readxl reshape taxize XML]; }; TRADER = derive2 { name="TRADER"; version="1.2-3"; sha256="1w9m2b866dyj82s118m64q8j9a1chpq2km2pnn9mfwwj8sivgdgn"; depends=[dplR]; }; - TRAMPR = derive2 { name="TRAMPR"; version="1.0-8"; sha256="0nxp8wdr7yx94fk14m0r4dh2jxcvjqp6lg02092zww5y7jlbf4ds"; depends=[]; }; + TRAMPR = derive2 { name="TRAMPR"; version="1.0-9"; sha256="16fbzp6b6y25k9h7m4qpmbgj10przywm2rh8kvw8a8p0xkskc9k5"; depends=[]; }; TRD = derive2 { name="TRD"; version="1.1"; sha256="0bhn4bcrq39f5dgqc74jqsfhs1iqfxhawacqqyncbk2372013nqp"; depends=[Rlab]; }; - TRES = derive2 { name="TRES"; version="1.1.0"; sha256="0brj8wszgf9fkqfa3v0qg5wg9wi1b8k2ddixv3p29cdb57gsacdw"; depends=[ManifoldOptim MASS pracma rTensor]; }; + TRES = derive2 { name="TRES"; version="1.1.1"; sha256="0fx52911sjqlgkj3ad8frj3xnd2jlzmzcian9qj3hkmpyjx65648"; depends=[ManifoldOptim MASS pracma rTensor]; }; TRSbook = derive2 { name="TRSbook"; version="1.0.2"; sha256="0lj20i6gybinc196nzjfi6ayzmm970s9vp43lj60v96g5dl7qv1b"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; TSA = derive2 { name="TSA"; version="1.2"; sha256="0gjfqibwdznz0nka95k4fjm935svxjpnqfywwz403crn2lh30h6q"; depends=[leaps locfit mgcv]; }; TSCS = derive2 { name="TSCS"; version="0.1.1"; sha256="0dllaw69rl26hgqac5q66k13gfmnxhn3wf0j8nx5xvi7yclzc3ay"; depends=[ggplot2 rgl tseries]; }; @@ -4523,7 +4532,7 @@ in with self; { TSMSN = derive2 { name="TSMSN"; version="0.0.1"; sha256="0zy9r6i1p161h1zh0vnz1npsh48q3nc2c5hcgzvf78nfznnn6wg1"; depends=[mvtnorm numDeriv progress sn]; }; TSMining = derive2 { name="TSMining"; version="1.0"; sha256="1n32acagffiw31pr485ly3phx33zw7vj009bvw4lbqpixa1pszj2"; depends=[foreach ggplot2 plyr reshape2]; }; TSMySQL = derive2 { name="TSMySQL"; version="2015.4-1"; sha256="1gdda7li320ba9qfxfl5c4cwl2ln5jdbvid98cryj175g0nbmx7b"; depends=[DBI RMySQL tframe TSdbi TSsql]; }; - TSP = derive2 { name="TSP"; version="1.1-8"; sha256="0g44f2a4m7rfx6y51cdbr6vcmmpbwgyzpvfjksq3lb7gcpbr7xrx"; depends=[foreach]; }; + TSP = derive2 { name="TSP"; version="1.1-9"; sha256="183m6crb0dv17llj86059n3hbgsahbhfcqlx0ijdzkssg11i1cy7"; depends=[foreach]; }; TSPostgreSQL = derive2 { name="TSPostgreSQL"; version="2015.4-1"; sha256="11201zpbrva6gwc9hg8pynadrps6d8pb3syzba9nyjpv2ck6x3ry"; depends=[DBI RPostgreSQL tframe tframePlus TSdbi TSsql]; }; TSPred = derive2 { name="TSPred"; version="4.0"; sha256="0zjx33llkvvj7m4z16crybw0y6s6zvlblxn2in3j7v9cv0ihhsa8"; depends=[EMD forecast KFAS MuMIn vars wavelets]; }; TSS_RESTREND = derive2 { name="TSS.RESTREND"; version="0.2.13"; sha256="0wbwkhc1b5dql87sj1441cknidpgwcflwlid2yj6d64a6wsipn1l"; depends=[bfast broom ggplot2 RcppRoll strucchange]; }; @@ -4541,7 +4550,6 @@ in with self; { TSfame = derive2 { name="TSfame"; version="2015.4-1"; sha256="197v123mkxr7qlksnb5iadms5zbc8xqbpgr2cspb8x1krz6phssz"; depends=[DBI fame tframe tframePlus tis TSdbi]; }; TSmisc = derive2 { name="TSmisc"; version="2016.8-1"; sha256="0xvn6qlvvdc65l356r8b5ppddjd35k9fc4b5w5wn3j5wzxfllbk1"; depends=[DBI gdata quantmod tframe tframePlus TSdbi tseries zoo]; }; TSodbc = derive2 { name="TSodbc"; version="2015.4-1"; sha256="0m6r97gs483jg6jlmfkbzxg3jvf6q140kvpidjccj224zb1sqlcq"; depends=[DBI RODBC tframe tframePlus TSdbi TSsql]; }; - TSplotly = derive2 { name="TSplotly"; version="1.1.1"; sha256="0amy8lmxl4mid6f5jhd0mcaqwpr8smxj0wa5561md15ix4qnvwmi"; depends=[dcemriS4 forecast ggplot2 plotly prettydoc zoo]; }; TSrepr = derive2 { name="TSrepr"; version="1.0.3"; sha256="1sbspq2pyyrc9zh2dx8nq3yv58rwziv2a2j1jfgkz8v9zqrsbhqf"; depends=[dtt MASS mgcv quantreg Rcpp wavelets]; }; TSsdmx = derive2 { name="TSsdmx"; version="2016.8-1"; sha256="06h1iwgshiq4bvly5l1nrddrh2knc82z2aqxh8ls9ipbs7qjsvaf"; depends=[DBI rJava RJSDMX tframe tframePlus TSdbi]; }; TSsmoothing = derive2 { name="TSsmoothing"; version="0.1.0"; sha256="1m4y6hfw5ghqmvbnha05w6k0abbr08xdcahmh897g68b06vcrjsl"; depends=[ggplot2 gridExtra MASS Matrix]; }; @@ -4553,8 +4561,7 @@ in with self; { TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; }; TTmoment = derive2 { name="TTmoment"; version="1.0"; sha256="0a4rdb4fk1mqnvvz0r15kni0g5vcj4xkkcwwv7c2gxc94xh5i5ih"; depends=[mvtnorm]; }; TULIP = derive2 { name="TULIP"; version="1.0"; sha256="0v0qnhlgj31mdl8xhhcbdlnmfcfn2scpr0bf2jxkxpyxiavqdfxy"; depends=[glmnet MASS Matrix tensr]; }; - TUWmodel = derive2 { name="TUWmodel"; version="1.0-2"; sha256="1b07isi7s22q65h9yabrz515nr4vxp2ynpl37l2lsf4mcpjjzg4x"; depends=[]; }; - TVsMiss = derive2 { name="TVsMiss"; version="0.1.1"; sha256="1lvswq3syp2mfcf0higmyg5k5qhg1q6jaz8g75az3xajn4jylm0k"; depends=[glmnet Rcpp]; }; + TUWmodel = derive2 { name="TUWmodel"; version="1.1-1"; sha256="1am3ywcj1rqgz5i2g9c6d6fgiv8b2nabllfy84xx1n18pin7mfbk"; depends=[]; }; Taba = derive2 { name="Taba"; version="0.1.0"; sha256="0pqmz7gyf719s5b7mjmmmxr5il3pzgsymibxir6ljpgdsdgbgi5s"; depends=[robustbase]; }; Table1Heatmap = derive2 { name="Table1Heatmap"; version="1.1"; sha256="1nrabjivfsdhaqmlq365pskkrp99jqsxn8vy03mdnqn5h5zv7wvx"; depends=[colorRamps]; }; TableHC = derive2 { name="TableHC"; version="0.1.2"; sha256="1il86xjc4h1sdq3gpi4s7xbkcgzpgfqy5ivzjdkbq45d06pssk21"; depends=[]; }; @@ -4574,23 +4581,23 @@ in with self; { TcGSA = derive2 { name="TcGSA"; version="0.12.7"; sha256="0l28sldpavyvhm9hab9gb7i7rmlxpj7ivffi6xx8lg7qjn6d21v5"; depends=[cluster cowplot ggplot2 GSA gtools lme4 multtest reshape2 stringr]; }; Tcomp = derive2 { name="Tcomp"; version="1.0.1"; sha256="1k0gsf3yr5n9zc2yi6szxm6s7bf61lz4fx8m3v48jlp5w900prwb"; depends=[forecast Mcomp]; }; TeXCheckR = derive2 { name="TeXCheckR"; version="0.6.0"; sha256="1qrzslcipg3j1317dhizxhcxyx2dpx7jh91vkms10wgc6vpqgrw4"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr rstudioapi zoo]; }; - TeachBayes = derive2 { name="TeachBayes"; version="1.0"; sha256="1mfhlkm7wp2i4hvc63xzfyw3q4z1xhlbi933pkqkbrhih94z4rz7"; depends=[dplyr ggplot2 gridExtra LearnBayes shiny]; }; TeachNet = derive2 { name="TeachNet"; version="0.7.1"; sha256="12kkpr96mq0jr07k7ivcmwhrfgas1qrfqfhxa4gm7vv3vkjn0gs9"; depends=[]; }; TeachingDemos = derive2 { name="TeachingDemos"; version="2.10"; sha256="016pivvy8gzz8f3clnr5dg488rb1lf0l5s00c3v34gm1dgiw5x1f"; depends=[]; }; TeachingSampling = derive2 { name="TeachingSampling"; version="4.0.1"; sha256="1hh56j1l8wyglnmy92cvh0awcyfjzk6iwgwnhdbc2infjq8fr1lg"; depends=[dplyr magrittr]; }; Tejapi = derive2 { name="Tejapi"; version="1.0.1"; sha256="1v80yjbik6shqad2nvi374dpzs9bjv9ah26agy0khmwnbz6029rk"; depends=[httr jsonlite]; }; TempCont = derive2 { name="TempCont"; version="0.1.0"; sha256="1pl0czrpw74zfm5vycyl0h8hc3n5whf4g6a2759a22384gk5fq7k"; depends=[nlme]; }; - TempleMetrics = derive2 { name="TempleMetrics"; version="1.2.0"; sha256="0g8a799grsjqyq55pnlgixyq2qxhvl5k01jcjwc08q54w2dg0xf0"; depends=[BMisc pbapply]; }; - Temporal = derive2 { name="Temporal"; version="0.1.1"; sha256="0x001apiph67cyh2ckx2k9mi6jb86agnmfvn94i27q9lpy4cn1sh"; depends=[expint numDeriv plyr Rcpp RcppEigen]; }; - Ternary = derive2 { name="Ternary"; version="1.1.3"; sha256="1hpm6ybksyizzkpig88jczj58kzgc82dmm22wy61hqhlbs4pmj1z"; depends=[viridisLite]; }; + Temporal = derive2 { name="Temporal"; version="0.2.0"; sha256="114ld41l2dipw7cpyh7fy3n332v1dkiqvdng6vkk9wm6jmda7wya"; depends=[expint numDeriv plyr Rcpp RcppArmadillo]; }; + Tendril = derive2 { name="Tendril"; version="2.0.4"; sha256="1wvczfklsccs8jd081vb6d6h7i35lhf6na925fm7wq8ars0b23wd"; depends=[dplyr ggplot2 magrittr plotly plyr reshape2 scales]; }; + Ternary = derive2 { name="Ternary"; version="1.1.4"; sha256="0js2ylif6171f1548d05lfw4kdlqkmqa6a510x6i9px93bvvkhsq"; depends=[viridisLite]; }; TestCor = derive2 { name="TestCor"; version="0.0.1.1"; sha256="1rxw5rz687ax3zlpaxb9bak6dd2jdl49h3fdzbz7r8vycwanwydq"; depends=[MASS Rcpp]; }; TestDataImputation = derive2 { name="TestDataImputation"; version="1.1"; sha256="10b1g9m2s6nbs8lrpcx3s1jf0fmqyd07mg3vx1pnma8r3vwy1yh7"; depends=[Amelia mice]; }; - TestDesign = derive2 { name="TestDesign"; version="1.0.1"; sha256="0d4j4ck4w2hhdmbp0cjp483xxgw0dhf226mbrkhfaimr2nddfbpl"; depends=[crayon foreach logitnorm lpsymphony Matrix Rcpp Rdpack]; }; - TestDimorph = derive2 { name="TestDimorph"; version="0.2.9"; sha256="0f2np7rqlcqxj2x1lwx6fryvdizan21j9962i51yi9b6pvkbpn6h"; depends=[caret corrplot DescTools dplyr ggplot2 klaR MASS mda multcompView plotROC plyr purrr randomForest reshape2 Rfast rlang stringr tibble tidyr tmvtnorm truncnorm]; }; + TestDesign = derive2 { name="TestDesign"; version="1.0.2"; sha256="1vz0bbbk74g3i4dlsd972n41mf0dhd74f9p2n47mgs3fh1r598zd"; depends=[crayon foreach logitnorm lpSolve Matrix Rcpp Rdpack]; }; + TestDimorph = derive2 { name="TestDimorph"; version="0.3.0"; sha256="0r9v32hz1gy1xyrz5yw8jsncnn8camzv8ha7k3df43rvnprv6xhf"; depends=[caret corrplot DescTools dplyr ggplot2 klaR MASS mda multcompView plotROC plyr purrr randomForest reshape2 Rfast rlang stringr tibble tidyr tmvtnorm truncnorm]; }; TestFunctions = derive2 { name="TestFunctions"; version="0.2.0"; sha256="018nkz8r6vqahrzq3d588i3ffb1bmd1pdk87j4ivcdsx99mq15sn"; depends=[]; }; TestScorer = derive2 { name="TestScorer"; version="1.7.2"; sha256="006c3g3gx55mfr93srldwvgz5vm6nkr3f57yi4qg6krn0d32865f"; depends=[]; }; TestingSimilarity = derive2 { name="TestingSimilarity"; version="1.1"; sha256="1iq0wh13rl6rby44ql4d286r1akzwmbpsvnq9p8lkl8709z0d34w"; depends=[alabama DoseFinding lattice]; }; TexExamRandomizer = derive2 { name="TexExamRandomizer"; version="1.2.3"; sha256="0l0vpx4rkib2m8hwhwy9j8pqyf7gpb9qg8wpnh3238snwpadgy3a"; depends=[assertthat jsonlite Rcpp stringr]; }; + TexMix = derive2 { name="TexMix"; version="0.5.3"; sha256="0qp7rlw4y2kw6bvh3rwy33p1g404q4ar1gg8ycdapwsyckq76nhn"; depends=[classInt Formula maptools RColorBrewer sp]; }; TextForecast = derive2 { name="TextForecast"; version="0.1.2"; sha256="0yj2m22imzllz07wx04nar2mfpyl06jiq0ya1nwgaq74kaiym42p"; depends=[doParallel dplyr forcats ggplot2 glmnet Matrix pdftools plyr pracma RColorBrewer tidyr tidytext tm udpipe wordcloud]; }; ThankYouStars = derive2 { name="ThankYouStars"; version="0.2.0"; sha256="0r77ns3102wj1wvrfsa06l427imxyfhigpbs36cdxl2j87qrjzl6"; depends=[httr jsonlite]; }; ThermIndex = derive2 { name="ThermIndex"; version="0.2.0"; sha256="0s9d55577dq61qixwwfwmqc2k2c8my00j2ng97ng42cw0jc7aylm"; depends=[]; }; @@ -4600,7 +4607,7 @@ in with self; { ThreeGroups = derive2 { name="ThreeGroups"; version="0.21"; sha256="0hipxa45v9ysb2qbk33kjycnvqar7bff1ajxd6fzhpc3jc9hflw4"; depends=[]; }; ThreeWay = derive2 { name="ThreeWay"; version="1.1.3"; sha256="17yl8zq029wiy3c0f4ssljx85dnm9n862wj2d24w7p0lxlvarmz6"; depends=[]; }; Thresher = derive2 { name="Thresher"; version="1.1.3"; sha256="16zf5cwc2c5j61xcrqsycwrsc162spyqgk9mac7n37mymn5agbwp"; depends=[ade4 ClassDiscovery colorspace MASS movMF oompaBase PCDimension]; }; - ThresholdROC = derive2 { name="ThresholdROC"; version="2.8"; sha256="0w5sxi6fgy3w1qj129g9z83822i7qx5s4js7dvzcdp2yfchj7pb3"; depends=[MASS numDeriv pROC]; }; + ThresholdROC = derive2 { name="ThresholdROC"; version="2.8.2"; sha256="1fsxf43syp371149wmbxjc13rrai69gc61xdlgrqplv4v0nqqk73"; depends=[MASS numDeriv pROC]; }; TickExec = derive2 { name="TickExec"; version="1.1"; sha256="0v0m0wi49yw0ply19vnirl2zwnk61sxalx24l8cadvkssgs13509"; depends=[]; }; TiddlyWikiR = derive2 { name="TiddlyWikiR"; version="1.0.1"; sha256="0vwwjdmfc8c0y2gfa8gls1mzvp29y39c9sxryrgpk253jj9px1kr"; depends=[]; }; TideCurves = derive2 { name="TideCurves"; version="0.0.4"; sha256="1i5qm6wwm6m0xrmr6dvk3pn6apxxqw9hznv8vypzwnky7bizkl90"; depends=[chron data_table fields]; }; @@ -4614,7 +4621,6 @@ in with self; { TimeWarp = derive2 { name="TimeWarp"; version="1.0.15"; sha256="1v6f6d1h9dc8npdy0ph5hhc4jjkzh8kac48lz4ahgngi9n0xwql9"; depends=[]; }; Tinflex = derive2 { name="Tinflex"; version="1.5"; sha256="15nbzr3q8rfrqywvlqi48r30fgq4lhlhp1fbnf12j49k6q2aixb1"; depends=[]; }; TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.1-0"; sha256="07lw6jnr76qrxwrwv90hi5ih2xf6g4sz4hfapk5vf1y3ayfskkl0"; depends=[DescTools mclust TeachingDemos]; }; - TippingPoint = derive2 { name="TippingPoint"; version="1.1.0"; sha256="1f5bfag892yk47r1pw2rlvqz9qnkaz8radprpxh0q0knviw3f9fp"; depends=[bayesSurv ggplot2 RColorBrewer reshape2]; }; Tlasso = derive2 { name="Tlasso"; version="1.0.1"; sha256="0flx4l7q3qndp77349ayfrszyim7mvs7yfvv3j9a1mhf3gdn9j14"; depends=[expm huge igraph rTensor]; }; TmCalculator = derive2 { name="TmCalculator"; version="1.0.0"; sha256="067xcpik00r6cdb4q1z09dgdqacyxqg21xn9nzvqfnp6s3nw6a9s"; depends=[]; }; Tmisc = derive2 { name="Tmisc"; version="0.1.22"; sha256="0h25k5xs8wnyzhl8alzlwircdl1hmclljjpcapnfg7na4yskzsaq"; depends=[dplyr rstudioapi tibble]; }; @@ -4626,8 +4632,8 @@ in with self; { TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="1.0.1"; sha256="0yc21vs10rzmwx0z6d0gyyncr25835vb7wpn392csc5big6d73xc"; depends=[memoise]; }; TouRnament = derive2 { name="TouRnament"; version="0.2.5"; sha256="09i0frzzxi5ymjlvh81rmisxh35amrvhxbkjq5351fhlpf1n977z"; depends=[]; }; ToxicoGx = derive2 { name="ToxicoGx"; version="0.1.1"; sha256="06xkz08ppq99s7zrjpkb463rqj2vn7abgm50knac5hi5ixmirdlb"; depends=[Biobase caTools CoreGx data_table downloader dplyr ggplot2 magrittr RColorBrewer reshape2 scales SummarizedExperiment tibble tidyr]; }; - TraMineR = derive2 { name="TraMineR"; version="2.0-14"; sha256="15lcyy9pwm5gfwihb6nkcjjhkl4jan12hfqrwa6rlzzv9z5304j5"; depends=[boot cluster Hmisc RColorBrewer]; }; - TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.6"; sha256="135s6aqkx18c364y9z0an0sbnwkgb2yrzxim3nd5khnbbnqdb5z2"; depends=[cluster RColorBrewer survival TraMineR]; }; + TraMineR = derive2 { name="TraMineR"; version="2.0-15"; sha256="0yfgrbdkzy5gpd7q7s64rd7i7k4b9myr3gd1zb7spl16pgvmp7zv"; depends=[boot cluster colorspace Hmisc RColorBrewer]; }; + TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.7"; sha256="0lls9683jq0ws62sqfj3zm1v2v3ymn0flpkv3iwqb5i84mj63aq6"; depends=[cluster RColorBrewer survival TraMineR]; }; TrackReconstruction = derive2 { name="TrackReconstruction"; version="1.2"; sha256="1kpdiwwzxsdwv5255xlvcnxvnp39ky0aws41g1l5i7cpbv88kca5"; depends=[fields RColorBrewer]; }; Trading = derive2 { name="Trading"; version="1.2"; sha256="0wlwpf1iygcs0cy7ms57b1bbp8f3s193bvc6fcm31ih5ph8pr48i"; depends=[]; }; TrafficBDE = derive2 { name="TrafficBDE"; version="0.1.0"; sha256="1lnh9lbjxaradivnd1dkd2szggjh2r4v7klpyxb862dxsmdxxrqw"; depends=[caret data_table dplyr lubridate neuralnet RCurl zoo]; }; @@ -4640,22 +4646,21 @@ in with self; { TreeDep = derive2 { name="TreeDep"; version="0.1.3"; sha256="0ja2hp9sxzybac6dqdsns5q1rj12swl240znsnsffg9mkvzhq6rl"; depends=[ggplot2 lubridate]; }; TreeLS = derive2 { name="TreeLS"; version="1.0"; sha256="0iqayrwwzd308karhs2pjy2sdp4xg6ncsnah7f68liia1znnld5y"; depends=[BH data_table lidR magrittr raster Rcpp RcppEigen rgl]; }; TreePar = derive2 { name="TreePar"; version="3.3"; sha256="1sm518b1b4b1p0n5979qzvi2nacxpp3znbg9n75pf2a8z8wy6p4l"; depends=[ape deSolve Matrix subplex TreeSim]; }; - TreeSearch = derive2 { name="TreeSearch"; version="0.3.2"; sha256="1h7s3i65n5j7mk2qxqyqy0h379jlszywh8hfmd93pn1yh01v3sz3"; depends=[ape clue colorspace memoise phangorn R_cache Rcpp Rdpack]; }; + TreeSearch = derive2 { name="TreeSearch"; version="0.4.0"; sha256="1mlvm0j2farxwyivjsx1994bh8l9qb4cx65096fi5zqzi5ybqigd"; depends=[ape phangorn R_cache Rdpack TreeTools]; }; TreeSim = derive2 { name="TreeSim"; version="2.4"; sha256="0nmzx2723n1f5lr951zz2ih2gnpfim5qzihlayhpf181z1qijv93"; depends=[ape geiger]; }; - TreeSimGM = derive2 { name="TreeSimGM"; version="2.3"; sha256="0qwqvmmdn290llz5hmmx2q24jjmd1bxssrslzv31kzi1yq5h6w0b"; depends=[ape TreeSim]; }; - TreeTools = derive2 { name="TreeTools"; version="0.1.3"; sha256="084kizkldrqj0q7gwl6v7r2v1pazd78qdxwjhnadllcxqid54ay7"; depends=[ape colorspace phangorn R_cache Rcpp]; }; - TrendInTrend = derive2 { name="TrendInTrend"; version="1.1.2"; sha256="1kdjrzv2s5vpyg1lx6qkxj3dyi84qwhrvz17mx731f9pp70cz29j"; depends=[pROC rms]; }; + TreeSimGM = derive2 { name="TreeSimGM"; version="2.5"; sha256="125c9rim272h0dfyygmmijz8dcnch3g9wy1ngki77dyrmdl77yfx"; depends=[ape TreeSim]; }; + TreeTools = derive2 { name="TreeTools"; version="0.1.4"; sha256="103ymrgwq41f2h5v31brxg4cjrqk82wqx0hhasrcpf1vq37dc512"; depends=[ape colorspace phangorn R_cache Rcpp]; }; + TrendInTrend = derive2 { name="TrendInTrend"; version="1.1.3"; sha256="0ijkijyhxhjc7202qssa9wnrmwgv4miv5n8jbml4qqj80kcsbdwp"; depends=[nleqslv pracma pROC rms]; }; TrendSLR = derive2 { name="TrendSLR"; version="1.0"; sha256="1x8j2dg3m7b22gva33y4s318a41wl60sz93y868z4j65hp13jb5k"; depends=[changepoint forecast imputeTS plyr Rssa tseries zoo]; }; TriMatch = derive2 { name="TriMatch"; version="0.9.9"; sha256="17v8hdm594i9qs5hvrzb1k94wrzvx07479rmvbk4314fim27mabg"; depends=[ez ggplot2 gridExtra PSAgraphics psych randomForest reshape2 scales]; }; TriadSim = derive2 { name="TriadSim"; version="0.1.1"; sha256="0m14k512b7q09zx51v2kxa8q9pk2i179w6ckl6jxj2acc860xw3k"; depends=[doParallel foreach snpStats]; }; TrialSize = derive2 { name="TrialSize"; version="1.3"; sha256="1hikhw2l7d3c7cg4p7zzrgdwhy9g4rv06znpw5mc6kwinyakp75q"; depends=[]; }; TrioSGL = derive2 { name="TrioSGL"; version="1.1.0"; sha256="0xzyv1vppw0v1xjpf83nnv1sx1xy7197ay6l7dzvr0vllappdam9"; depends=[]; }; TripleR = derive2 { name="TripleR"; version="1.5.3"; sha256="13s1vlmr4sqa2sq2fbcld86bh3g73yb204aawbks11rjblwzvb0h"; depends=[ggplot2 plyr reshape2]; }; - TropFishR = derive2 { name="TropFishR"; version="1.6.1"; sha256="06793rgidq1hdm3jwg1fxpglf5vh7w3xbk4hzj1pgw04na464ibv"; depends=[doParallel GA GenSA Hmisc MASS msm propagate reshape2]; }; + TropFishR = derive2 { name="TropFishR"; version="1.6.2"; sha256="1mmb573gf82rxsvrjal4iy5f5gjhjaws6kcabnhhp6cn5ainl64r"; depends=[doParallel GA GenSA Hmisc MASS msm propagate reshape2]; }; TruncatedNormal = derive2 { name="TruncatedNormal"; version="2.1"; sha256="13aw1lvfq8mz91fqy65zs5aps231m9mq5v0r82c2ps72jaa7mcpw"; depends=[nleqslv randtoolbox Rcpp RcppArmadillo]; }; Tsphere = derive2 { name="Tsphere"; version="1.0"; sha256="0xgxw2hfj40k5s0b54dcmz7savl8wy4midmmgc7lq4pyb8vd58xx"; depends=[glasso rms]; }; TukeyC = derive2 { name="TukeyC"; version="1.3-3"; sha256="0bdnfr44hk4c1yh7i9ya95gwbwnplj3hf0k0pl1wm4ghiav39vcq"; depends=[doBy]; }; - TukeyRegion = derive2 { name="TukeyRegion"; version="0.1.2"; sha256="03lik9vkah3hjhn0l4ci95v2h4q8mnziq006idipn69l4gmnddxl"; depends=[bfp BH ddalpha MASS Rcpp rgl Rglpk]; }; TunePareto = derive2 { name="TunePareto"; version="2.5"; sha256="0v1ylh4m5s80zp346pxxlvhm5070w83mlzfxjyp4n000c8r2nkf4"; depends=[]; }; TurtleGraphics = derive2 { name="TurtleGraphics"; version="1.0-8"; sha256="0h77pj7rs3lrqi1y2dm1cbrmj13mjpq6y5nw8bcq0s2kbnkfw67l"; depends=[]; }; Tushare = derive2 { name="Tushare"; version="0.1.3"; sha256="12aabkwlifc82yiym3yijpfpjhmhfwpw8mz4fb11qm6n4igr1yhg"; depends=[data_table forecast httr tidyverse]; }; @@ -4668,7 +4673,7 @@ in with self; { UBL = derive2 { name="UBL"; version="0.0.6"; sha256="0238irg7r3g248h4x4bdb308wvfqq99hwykywf4k2bssdd25kwjk"; depends=[automap gstat MBA randomForest sp]; }; UCR_ColumnNames = derive2 { name="UCR.ColumnNames"; version="0.1.0"; sha256="1nwwq93f60r9aik51l7mzckg81f81nz5kgzynyzp5sm4y2wmpzwn"; depends=[]; }; UCSCXenaShiny = derive2 { name="UCSCXenaShiny"; version="0.4.0"; sha256="1m67ahh2k0mc8215nnb32r8nf9niax7y5nn3qpwg1fcav7g9ns66"; depends=[dplyr DT ggplot2 ggpubr magrittr plotly RColorBrewer shiny shinyBS shinyjs shinythemes shinyWidgets tibble UCSCXenaTools zip]; }; - UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="1.2.10"; sha256="10aansvqf2abgppk7mx9nr7ingy994qci59ikr8rv1y2hnfar2l2"; depends=[dplyr httr jsonlite magrittr readr rlang]; }; + UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="1.3.1"; sha256="1s4mkl9bf4lgqlfb5rjdk3fas9dsvqd5sgypw6jl2dbdf40krza8"; depends=[dplyr httr jsonlite magrittr readr rlang]; }; UKgrid = derive2 { name="UKgrid"; version="0.1.2"; sha256="135lvzaw4gjnc40aw28706fhiz7p06l1jhw830iyg03w2v4j0ar0"; depends=[data_table dplyr lubridate magrittr tsibble xts zoo]; }; UNCLES = derive2 { name="UNCLES"; version="2.0"; sha256="0c61sm09dh0yfrjrjjnizg7qrf8xgc1zdldwhjh64kq8k8g5wa69"; depends=[class kohonen pdist]; }; UNF = derive2 { name="UNF"; version="2.0.6"; sha256="0sr740dhfp7z9wvhajww43g5gz79x5y5dbflw5a813jgmiqm1jyq"; depends=[base64enc digest]; }; @@ -4686,22 +4691,22 @@ in with self; { UWHAM = derive2 { name="UWHAM"; version="1.0"; sha256="1qaj8anaxqnx4nc6vvzda9hhhzqk9qp8q7bxm26qgia4hgascnrv"; depends=[trust]; }; UdderQuarterInfectionData = derive2 { name="UdderQuarterInfectionData"; version="1.0.0"; sha256="084bq5ai1ccp4www64z0ipic74zkd8j1ygv0py900164a25wdr9b"; depends=[]; }; Ultimixt = derive2 { name="Ultimixt"; version="2.1"; sha256="0fh2qpm7qpv1170jzbmzqhvwsn69lblizzisgasswy2nix2jjz4y"; depends=[coda gtools]; }; - Umatrix = derive2 { name="Umatrix"; version="3.1"; sha256="131j7yrb0yzffl6gvirdj29zmsbwg8163i15gg9f0clfcrl1kcx6"; depends=[abind AdaptGauss deldir fields geometry ggplot2 pdist plyr png Rcpp reshape2 shiny shinyjs]; }; - Umoments = derive2 { name="Umoments"; version="0.1.0"; sha256="0vgfvfb7ggi353scg4a2kbwagazn7qfyvi3mjn7c9cprcx0w0136"; depends=[]; }; - Umpire = derive2 { name="Umpire"; version="1.3.8"; sha256="1cxglmvzf4s97588x4hdky475wbzz74lay3ry076c7jxxx7pwipz"; depends=[]; }; + Umatrix = derive2 { name="Umatrix"; version="3.3"; sha256="188h959s5pawnny0fxlqmma03iww6af4x0y8p514bwh5xh9rj3kg"; depends=[abind AdaptGauss deldir fields geometry ggplot2 pdist plyr png pracma Rcpp reshape2 shiny shinyjs]; }; + Umoments = derive2 { name="Umoments"; version="0.1.1"; sha256="089d0xmsp0419mxjp6fs0s1palvdkr0i5dzqckcn6r2kjqj7izjg"; depends=[]; }; + Umpire = derive2 { name="Umpire"; version="1.3.9"; sha256="0wqbi27mnjafg1cm82mrlavb9jcrxvh2z28m63gl7jw3zcyxn816"; depends=[]; }; UncDecomp = derive2 { name="UncDecomp"; version="1.0.1"; sha256="1m44pgk7nffay09m4gkwb0khq0qjd7bq1p72blsmib46wmnwqfsa"; depends=[dplyr ggplot2]; }; - UncerIn2 = derive2 { name="UncerIn2"; version="2.0"; sha256="08cg7armz9xwwn1222aws98cwrvmw0s73pxpnszmrmrli1qs92k1"; depends=[automap fields geoR gstat RandomFields Rcpp sp]; }; - UncertainInterval = derive2 { name="UncertainInterval"; version="0.5.0"; sha256="11vwf45bhgzzriwjjzjvbbwpzknbf6xl5s9ng7gxh58q20jy038j"; depends=[nloptr reshape2 rootSolve zoo]; }; + UncertainInterval = derive2 { name="UncertainInterval"; version="0.5.2"; sha256="0ha3j34bzrrwywlww7370mnpx61vhf4gdz6hz0fbad7raf1ry2m1"; depends=[car MASS nloptr psych reshape2 rootSolve zoo]; }; UniDOE = derive2 { name="UniDOE"; version="1.0.2"; sha256="14jz4acrvbv59sbr7gya8g0z749vv0i04gl5wl0y4218byjvw6bs"; depends=[Rcpp]; }; UniIsoRegression = derive2 { name="UniIsoRegression"; version="0.0-0"; sha256="0lmrmb9sbk41ak7sbcrzhfnijb1skgb4lqg9m9imc98lcp69h7z0"; depends=[Rcpp]; }; - Unicode = derive2 { name="Unicode"; version="12.0.0-1"; sha256="1wpzj5jwmb9d9iz1xvgn8mc2xjri28g97k4lpafybb1v4xnxqk54"; depends=[]; }; + Unicode = derive2 { name="Unicode"; version="13.0.0-1"; sha256="12q98hdh46bbx17z6869bmn1j9bbhf524flvn76sqf20phk81xjy"; depends=[]; }; UniprotR = derive2 { name="UniprotR"; version="1.2.3"; sha256="0xlszwlrfi51day88ailgwr88wn7n0fdc0ms39gqy5jcw0xc9yky"; depends=[alakazam data_tree dplyr ggplot2 ggpubr gridExtra httr magick magrittr plyr scales tidyverse]; }; UnitCircle = derive2 { name="UnitCircle"; version="0.1.3"; sha256="0z5ssps8l5ka4aw4984qml15scw4pfssara5dls82afhfhpkszsr"; depends=[]; }; UnivRNG = derive2 { name="UnivRNG"; version="1.2"; sha256="0cx6bdzzypxnaqi4wkb20saqd5sfa2rga5cqh694l70vj9c3zw26"; depends=[]; }; UpSetR = derive2 { name="UpSetR"; version="1.4.0"; sha256="007i0njnjjy7vbrxabwav7a1kk2n0hn2mkvqsdzzfk10ckp5y7im"; depends=[ggplot2 gridExtra plyr scales]; }; UsingR = derive2 { name="UsingR"; version="2.0-6"; sha256="1lr8z45r5s7fxrd42rswm6w7s3k5nds244b9d525jb5v4n8w9kpw"; depends=[HistData Hmisc MASS]; }; UtilityFrailtyPH12 = derive2 { name="UtilityFrailtyPH12"; version="1.0"; sha256="06f5gmwwk1r14ab6v5jcxz0pmdph7ffi4y57mjg9byn7pjnibflk"; depends=[bindata mvtnorm Phase123 Rcpp RcppArmadillo]; }; - V8 = derive2 { name="V8"; version="3.0.1"; sha256="0xkyja3722qbs2ndyw3171yfsakijnydm2bfqv76cf0gbzxdab5b"; depends=[curl jsonlite Rcpp]; }; + V8 = derive2 { name="V8"; version="3.0.2"; sha256="0cwhdk77fgmlaihh2mf0iclqz7fps7s7hvsw2s65m62w9gbwfhlk"; depends=[curl jsonlite Rcpp]; }; + VALERIE = derive2 { name="VALERIE"; version="1.0.0"; sha256="0rll02y0virzifn5xvsi52kn17j99vwmd23awkbqw50wvp5qkgss"; depends=[GenomicAlignments GenomicRanges ggplot2 ggplotify ggpubr IRanges pheatmap plyr Rsamtools scales]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; VARSEDIG = derive2 { name="VARSEDIG"; version="1.9"; sha256="18j73wm22bjvf2y0c09bfmdyx4x2gd0jhfcqhbk1sgsk24zjr63z"; depends=[]; }; VARshrink = derive2 { name="VARshrink"; version="0.3.1"; sha256="09hysmxxawcbyfx6bia546aqydryl2r5p3ai7bvl6ghdckw5mnpl"; depends=[ars corpcor MASS mvtnorm strucchange vars]; }; @@ -4719,24 +4724,21 @@ in with self; { VGAMdata = derive2 { name="VGAMdata"; version="1.0-3"; sha256="1jicadjaqmys1bbgkp64hmm8wwmi6f734il00v8qjz3jl9b02pkn"; depends=[]; }; VGAMextra = derive2 { name="VGAMextra"; version="0.0-1"; sha256="0rlj4q6ry6v3fnpmg4s33ynn7qzs5m98csap55nyn6r9ynrh5gk5"; depends=[VGAM]; }; VHDClassification = derive2 { name="VHDClassification"; version="0.3"; sha256="1ij4h3gzxb9mm9q743kc3sg2q609mnqz6mhlrbim1wcjji2b7bv4"; depends=[e1071 lattice]; }; - VICmodel = derive2 { name="VICmodel"; version="0.1.2"; sha256="0hrnj8jl31pbzz9rji5g5bc53da5mg75bf1lqgp8igqvhgy0a08k"; depends=[foreach Rcpp]; }; VIF = derive2 { name="VIF"; version="1.0"; sha256="0yvg6ikrcs7mhg0pavhcywrfysv7ylvnhxpc5sam86dbp69flx9x"; depends=[]; }; VIFCP = derive2 { name="VIFCP"; version="1.2"; sha256="0w41k25vss806m5vpwmmcfsmwaixmln0pliql3a6xlwsihha5i34"; depends=[]; }; VIGoR = derive2 { name="VIGoR"; version="1.0"; sha256="1c24s917aafqy46b3xlsw8v3afs11nd5bq83vlygpgnz1612jpga"; depends=[]; }; - VIM = derive2 { name="VIM"; version="4.8.0"; sha256="08x4a4yzgp8adgrv7a3666yma4b60n64mcsnvhzmwdy023f4ysrw"; depends=[car colorspace data_table e1071 laeken MASS nnet ranger Rcpp robustbase sp vcd]; }; - VIMGUI = derive2 { name="VIMGUI"; version="0.10.0"; sha256="14na9ss0vkcys979kdcciynwssqsvy2w566nydgzd3n7gcmx2agm"; depends=[Cairo foreign gWidgets gWidgetsRGtk2 Hmisc RGtk2 survey tkrplot VIM]; }; + VIM = derive2 { name="VIM"; version="5.1.1"; sha256="0w22ir0gvym7gqd6nw2j7w5ivlb3az1dkfxv33imimkb7c83056a"; depends=[car colorspace data_table e1071 laeken magrittr MASS nnet ranger Rcpp robustbase sp vcd]; }; VIRF = derive2 { name="VIRF"; version="0.1.0"; sha256="0bdkmbmkmmj78h9x025qsdzjzcx8xr2s98wlspcsghlz4hxkzcas"; depends=[BigVAR expm gnm ks matlib matrixcalc mgarchBEKK rmgarch]; }; VLF = derive2 { name="VLF"; version="1.0"; sha256="1il8zhm80mc22zj16dpsy4s6s9arj21l9ik0vccyrpnlr8ws3d3l"; depends=[]; }; VLMC = derive2 { name="VLMC"; version="1.4-3-1"; sha256="0cwfpxcj8g68j9z9fl66i0amj8ypf199iv3yyxzsmniqv4w5x4ar"; depends=[MASS]; }; VLTimeCausality = derive2 { name="VLTimeCausality"; version="0.1.0"; sha256="1fsdxpd9vxnx7919a601g6qf2db8f1p7ch5bfrwc0x89y6abzavv"; depends=[dtw ggplot2 RTransferEntropy tseries]; }; VNM = derive2 { name="VNM"; version="7.1"; sha256="19qglcibb7r6jjz0n0piklwfv3hi4jphd6vmyfbm0ccjjkmn5nin"; depends=[Rcpp]; }; VOSONDash = derive2 { name="VOSONDash"; version="0.5.1"; sha256="1mg38fh7rrf1b2madk7lqqg0rmkh73hl20f920b4pdggqnrpmqq6"; depends=[httpuv httr igraph lattice magrittr RColorBrewer rtweet shiny syuzhet tm vosonSML wordcloud]; }; - VRPM = derive2 { name="VRPM"; version="1.2"; sha256="1cai5a71vzkx0d7cwzsxbcz7r9cdkqjk4l4bp2ffj5pp7nrlh15r"; depends=[fields ggplot2 Hmisc kernlab R2HTML ROCR shiny survival viridis]; }; VSE = derive2 { name="VSE"; version="0.99"; sha256="07m5080nw72b77238v2wwdh4dxsvv6y78d4j1329n90wyj2crxl4"; depends=[car GenomicRanges igraph IRanges]; }; VSURF = derive2 { name="VSURF"; version="1.1.0"; sha256="1azfd4sb89mp27l86k293qj81x94gfiy1ihwnb6c558p8h69xsgf"; depends=[doParallel foreach randomForest ranger Rborist rpart]; }; VTShiny = derive2 { name="VTShiny"; version="0.1.0"; sha256="1zq6irla3q7hqs8jpjdya7vy3frqrj72rwmd1sgxwrkgpmpxw6x7"; depends=[EnvStats rmarkdown shiny]; }; VTrack = derive2 { name="VTrack"; version="1.21"; sha256="1acf2b8zy72shc4768rhikfa3590h3l3nwk32jk7pwsms0nb87rf"; depends=[checkmate doParallel foreach gdistance gstat Hmisc intervals lubridate plotKML plyr raster sp spacetime XML]; }; - VWPre = derive2 { name="VWPre"; version="1.2.2"; sha256="02fki480jxf869kaxawwyj9yznhqci8gmhxz45klayyghr90vd4g"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; + VWPre = derive2 { name="VWPre"; version="1.2.3"; sha256="0pvk7qmi6s8yqf6s0vbf1ldwrs2b37kgayrdsvfpvxhljg79zl1i"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; }; VancouvR = derive2 { name="VancouvR"; version="0.1.1"; sha256="1nzjdassan5kh7wk3xf6kry4jifgjn0gan61ibwhyzy1awpcfngv"; depends=[digest dplyr httr purrr readr rlang sf tibble urltools]; }; VarBundle = derive2 { name="VarBundle"; version="0.3.0"; sha256="0jfx9gkb3f29lgc0nrz3xc7m2ham0scx9lay7x5a6ira7crga6cr"; depends=[crayon dplyr glue magrittr R6 stringr tibble]; }; @@ -4754,7 +4756,7 @@ in with self; { VennDiagram = derive2 { name="VennDiagram"; version="1.6.20"; sha256="1ic1jaxzw98si2p4n1fl4n3myhd7fpw0njb634cwhviwybzv6775"; depends=[futile_logger]; }; VertexSimilarity = derive2 { name="VertexSimilarity"; version="0.1"; sha256="0f638y272dbmz5747wxqy9pxasxk3a9f9wf31gf297qx7268ab1m"; depends=[igraph]; }; VertexSort = derive2 { name="VertexSort"; version="0.1-1"; sha256="0n9m5l85ylin6756rsksak94nv0626qd7czhhj6plz4nfrr27sgl"; depends=[igraph snowfall]; }; - VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.6"; sha256="1ccl4j3vb6aw1qfbqil67dy74daldajwzm7s5hqcidm73fd0wknc"; depends=[Rcpp]; }; + VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.8"; sha256="0yvm3kkc7ssk85ripdgbxj8gazqb1dfswgjy63c3gb135zi2cbqk"; depends=[Rcpp]; }; VetResearchLMM = derive2 { name="VetResearchLMM"; version="1.0.0"; sha256="1a7wm04bsr5shak7l8ypxlhlnx3qkq1jdpjnji1n05p6b00ih9h1"; depends=[ggplot2 lme4 lmerTest multcomp nlme]; }; ViSiElse = derive2 { name="ViSiElse"; version="1.2.2"; sha256="1ay09dahlqnfrgf4gl4s45a4ahrk2xliagxqz5h826w2vzsawqcc"; depends=[chron colorspace ggplot2 Matrix reshape2 stringr]; }; VineCopula = derive2 { name="VineCopula"; version="2.3.0"; sha256="0w9lpdb9mjia2vg9h4v418g8zw8xfq83hmih37hf3yp7p88vja1k"; depends=[ADGofTest lattice MASS mvtnorm]; }; @@ -4768,7 +4770,7 @@ in with self; { WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; }; WDI = derive2 { name="WDI"; version="2.6.0"; sha256="00y8i69yfnflv0xyfpxl0628p5iivr38cjih7w11sfprdgbzawcx"; depends=[RJSONIO]; }; WEE = derive2 { name="WEE"; version="1.0"; sha256="0i3h67p72lr708mwdw3rbzr1lqqr8n2dxv7f0bwyqzxv41sx1iz3"; depends=[doParallel foreach quantreg]; }; - WGCNA = derive2 { name="WGCNA"; version="1.68"; sha256="1s7gy5vd7x67hpgli8r7ba2z99w3psiyv5hqmrh94zw141dg210a"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; }; + WGCNA = derive2 { name="WGCNA"; version="1.69"; sha256="022hkprnrafvggi8pkjffkvk1qlnibmbbxxrni00wkrdbga5589f"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp survival]; }; WGScan = derive2 { name="WGScan"; version="0.1"; sha256="0jma6di9hbdimswdfm58568vahcjy46hbhb78idjsdz4bl9apvq3"; depends=[data_table MASS Matrix seqminer SKAT]; }; WLreg = derive2 { name="WLreg"; version="1.0.0"; sha256="0paghjcshhrr6y1gm98d6gr78zvgzhl678g9f96hppfa4q3lfpr7"; depends=[inline survival]; }; WMCapacity = derive2 { name="WMCapacity"; version="0.9.6.7"; sha256="167wx759xi7rv74n6sdsdkjnfpxdsiybk4ik70psdgfwdqqcga1y"; depends=[cairoDevice coda gtools gWidgets gWidgetsRGtk2 RGtk2 XML]; }; @@ -4776,36 +4778,35 @@ in with self; { WMWssp = derive2 { name="WMWssp"; version="0.4.0"; sha256="16m4hvjqdcpkvswvqwgm0pq9nm7vjrlqldzi4i69izlwccp37v47"; depends=[]; }; WPC = derive2 { name="WPC"; version="1.0"; sha256="0li502hwa4n945yfnilslyvl12ls66kazbfmxb4kkjbaf500mjp9"; depends=[msm survival]; }; WPKDE = derive2 { name="WPKDE"; version="0.1"; sha256="100vla11fbw16x5n4w4kbslz4n725v4x6j0hrxzrk99ryl0crmf6"; depends=[]; }; - WR = derive2 { name="WR"; version="0.1.0"; sha256="00781l9rmfm8sqsmhqn59ihw3jsjphg8jnvk34bzh6aaxzdfybm9"; depends=[survival]; }; + WR = derive2 { name="WR"; version="0.1.1"; sha256="153f64b2zsykl5f8iwxlcqby96ag1an4w8lhs7dxx72gy5k4vs6c"; depends=[survival]; }; WRS2 = derive2 { name="WRS2"; version="1.0-0"; sha256="1ax7lchbg0f5miq5779p1zmk6pw36hvwwmbpvsfqwahl5wlvii0s"; depends=[MASS mc2d plyr reshape]; }; WRSS = derive2 { name="WRSS"; version="3.0"; sha256="16a7i6glgl5cshsn3w7gxviybmka06ylw5znz94gigyx0vhgv97p"; depends=[GGally ggplot2 Hmisc network nloptr]; }; WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.2"; sha256="1ssrqqf2hypif4nnfyl4lq03glyyg9ry9s14llf1njxamhjggfgg"; depends=[caret dplyr fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; - WVPlots = derive2 { name="WVPlots"; version="1.2.3"; sha256="061gzahn3sqzl7kn20k6151qf364sq048z765l0n8995rmv2z08b"; depends=[cdata ggplot2 gridExtra mgcv rqdatatable rquery sigr wrapr]; }; + WVPlots = derive2 { name="WVPlots"; version="1.2.4"; sha256="1mjfk4dijfgaibhrlnxq1iv6q9c2r8zb5ky6f7v840jhwx2k2pnz"; depends=[cdata ggplot2 gridExtra mgcv rqdatatable rquery sigr wrapr]; }; WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; }; WWR = derive2 { name="WWR"; version="1.2.2"; sha256="0ia1dd12r1l08s9nhgvk55jmqwv58jawm25gd2ni6wpa3mcmq02g"; depends=[inline]; }; WaMaSim = derive2 { name="WaMaSim"; version="1.0.0"; sha256="0sa7qd2bpn3sp06mlpissxxkfhg7j1d07nnwlnz7nyg7pivwnpan"; depends=[magrittr]; }; + WaterML = derive2 { name="WaterML"; version="1.9.0"; sha256="1wp7ps6xypxar89lbndk56sc3px62xz098jlnr9hq124mqac01qb"; depends=[httr XML]; }; Watersheds = derive2 { name="Watersheds"; version="1.1"; sha256="1gn52nl0rr29pqq94gjasc4fi1kjxlrpjdkgm2x56j5jbd162drk"; depends=[lattice maptools rgeos sp splancs]; }; WaveLetLongMemory = derive2 { name="WaveLetLongMemory"; version="0.1.2"; sha256="1p9ld6w2qgbvkvp7xkzzd14v89rxcwl6vlr1zgxkpc5awl1ln1a8"; depends=[fracdiff wmtsa]; }; - WaveSampling = derive2 { name="WaveSampling"; version="0.1.0"; sha256="1xyi4aj2l9bjj6f2y11wl29rabhzmkdph1bd8jh8jwwf2p3502wh"; depends=[Matrix Rcpp RcppArmadillo]; }; + WaveSampling = derive2 { name="WaveSampling"; version="0.1.1"; sha256="081pqxbrz8vsmjgammh0802frl8lqrw9z1svhdqjc65lqkwghh75"; depends=[Matrix Rcpp RcppArmadillo]; }; WaveletANN = derive2 { name="WaveletANN"; version="0.1.0"; sha256="08qnx0lk2laiyx1q1wxj15j0yic65r7mbhr6lqbdllq30v4dcj88"; depends=[forecast fracdiff wavelets]; }; WaveletArima = derive2 { name="WaveletArima"; version="0.1.1"; sha256="19hz2q280m41qh3m9lx3i9p6p5fl6pw8r9b06xk6sn04hxbim8xx"; depends=[forecast fracdiff wavelets]; }; WaveletComp = derive2 { name="WaveletComp"; version="1.1"; sha256="07w2aa0jiflvxyqhgh48705hg8hjspd103jd00i2pcw2v42hwmf8"; depends=[]; }; - WaveletGARCH = derive2 { name="WaveletGARCH"; version="0.1.0"; sha256="1sgpwdhg7snm0in93ky7jv8lgynnxwlmpgznyj747j7jl9cxz5qn"; depends=[FinTS forecast fracdiff rugarch wavelets]; }; + WaveletGARCH = derive2 { name="WaveletGARCH"; version="0.1.1"; sha256="0dj5bmvzfhj1cpn8qi2ax3iipr7jlq0f9vk4b1idqgh5dmdi8lh6"; depends=[FinTS forecast fracdiff rugarch wavelets]; }; WaverR = derive2 { name="WaverR"; version="1.0"; sha256="084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a"; depends=[kimisc MASS]; }; WeMix = derive2 { name="WeMix"; version="3.1.3"; sha256="0407ph8cbci4qwgk525r0y88iz45faq52ljlqa46q9076r9j7sng"; depends=[lme4 Matrix minqa NPflow numDeriv Rmpfr statmod]; }; WebGestaltR = derive2 { name="WebGestaltR"; version="0.4.3"; sha256="0l068mikd8ys7w2643kzmzy2qnj0khz3k780n1lm78ikzbk43sr0"; depends=[apcluster doParallel doRNG dplyr foreach httr igraph jsonlite Rcpp readr rlang svglite whisker]; }; WebPower = derive2 { name="WebPower"; version="0.5.2"; sha256="11255q41zai4q6n2mpk3fzhi2lyyr3g8dxqfajkb93f68m1b38jp"; depends=[lavaan lme4 MASS PearsonDS]; }; WeibullFit = derive2 { name="WeibullFit"; version="0.1.0"; sha256="1a80gcqbmvb1rz2dr2syy16wn6ixjn6l40gayys9zy8302hky9ir"; depends=[e1071 FAdist glue kSamples mixdist optimx R_methodsS3 R_oo sqldf xtable]; }; WeibullR = derive2 { name="WeibullR"; version="1.0.12"; sha256="0rj4q9hd49b914lz8q1d8n96xrl0h29avn95aigb3z7f8knf7g9g"; depends=[Rcpp RcppArmadillo]; }; - WeightIt = derive2 { name="WeightIt"; version="0.8.0"; sha256="0pw9pspyls0jk6w0i3dcwxmsfbvagncwgh1ilfgyq0v8mlilvr0y"; depends=[ggplot2]; }; + WeightIt = derive2 { name="WeightIt"; version="0.9.0"; sha256="0p16q0zc7xdxwsvdf15h97zj7cdhr1rmzawljsjn4yzqwqby7nsy"; depends=[backports crayon ggplot2]; }; Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; }; WeightedCluster = derive2 { name="WeightedCluster"; version="1.4"; sha256="05rmqhgfzh9fs4c1lhmrbk8s46ihaywy7n9qnivf7zcxxzxds0lj"; depends=[cluster RColorBrewer TraMineR]; }; WeightedPortTest = derive2 { name="WeightedPortTest"; version="1.0"; sha256="007v3w9ssiv2sds7sikpal27g6pxwxhs7bvcyw6kr0vg8gvlbi8h"; depends=[]; }; - WeightedROC = derive2 { name="WeightedROC"; version="2019.11.12"; sha256="1zznzvd2nlxq3c5gr88f6midglavmk6368wfqdbg7bwvfxsccgbz"; depends=[]; }; + WeightedROC = derive2 { name="WeightedROC"; version="2020.1.31"; sha256="1f43hwsabciraj1qxfh5wcqnnx1vvcf4pwqs376rcfd9161k15xv"; depends=[]; }; WgtEff = derive2 { name="WgtEff"; version="0.1.2"; sha256="1z8pndv43ssgmzldwaq0088lmf1g2mkmrbmzyaismcpngn9fqxsk"; depends=[]; }; - WhatIf = derive2 { name="WhatIf"; version="1.5-9"; sha256="0ihpp3wbhpsg00g0s31l0ca4q0a2sch2a2j8cgz14g8na43x8831"; depends=[lpSolve pbmcapply Zelig]; }; WhiteStripe = derive2 { name="WhiteStripe"; version="2.3.2"; sha256="0kzwglaazn820fzxd2g1fsiw2rnq0qxagns8b5mm3inflsgs35ng"; depends=[mgcv oro_nifti]; }; - WhopGenome = derive2 { name="WhopGenome"; version="0.9.7"; sha256="1xa7d9x5ny8g79scfkv7v5ix9m3mfzg0fks2bsan9zqyhcd01fsq"; depends=[]; }; WiSEBoot = derive2 { name="WiSEBoot"; version="1.4.0"; sha256="1fch78884ay7m2gy602k8df78gkvjiwzkjk550w0k4xbv430ld0h"; depends=[FAdist wavethresh]; }; WikidataQueryServiceR = derive2 { name="WikidataQueryServiceR"; version="0.1.1"; sha256="1bqgp3wldfmnwwh9llig8xpa4x0rcp1hcwyw7d7pw4ym61b2v65x"; depends=[dplyr httr jsonlite]; }; WikidataR = derive2 { name="WikidataR"; version="1.4.0"; sha256="0ajbizsyk5a7fgbfn26qydxpp5d8qfnlcwbslxrrn913f0yxbcb4"; depends=[httr jsonlite WikipediR]; }; @@ -4815,9 +4816,9 @@ in with self; { WindCurves = derive2 { name="WindCurves"; version="0.1.3"; sha256="0bvbnrkdk0g0radgcw4zbhq6czpvq3f7f34x83qk09i8ngmwd28c"; depends=[drc imputeTestbench readbitmap]; }; WordPools = derive2 { name="WordPools"; version="1.1-1"; sha256="081qnsq7wn1vczgf6ipz8wjmyg4vwhj1s5nrzh0dw4p9yz28dxv2"; depends=[]; }; WordR = derive2 { name="WordR"; version="0.3.1"; sha256="17g8v3xhdy57y0b95zrakhi0zamqi35v0zcmjpy47xyqyk4b2grs"; depends=[dplyr flextable officer]; }; - WorldFlora = derive2 { name="WorldFlora"; version="1.2"; sha256="1pjzxcnmkckq5r04lmsspyh4kijzjwk5aa6d8hpbfci63ab54dhp"; depends=[]; }; + WorldFlora = derive2 { name="WorldFlora"; version="1.4"; sha256="0lqqai4nibqs0j792z917n17azrp90dz6j1pml8y4dj2z37v9jkm"; depends=[]; }; Wrapped = derive2 { name="Wrapped"; version="2.0"; sha256="1z5kypsd39z9arsw57axckvl8b4jnr5wv60s9z58f5s89gn5vxxg"; depends=[AdequacyModel ald cubfits evd fBasics gamlss_dist GeneralizedHyperbolic GEVStableGarch glogis irtProb LCA lqmm metRology NormalLaplace normalp ordinal sgt SkewHyperbolic sld sn VarianceGamma VGAM]; }; - WrightMap = derive2 { name="WrightMap"; version="1.2.1"; sha256="16zp7h28fap5hq5xzvkb4lc217yhfmwzfbvw2lsni0gf9qxqkgqd"; depends=[]; }; + WrightMap = derive2 { name="WrightMap"; version="1.2.2"; sha256="0w1iwl45kv6vq5fg88hlkv93bpbrw8jm1wnhk9qxznlm0g13z33x"; depends=[]; }; WriteXLS = derive2 { name="WriteXLS"; version="5.0.0"; sha256="1gypq7zh22kpraz0bgj4jyvy2hbj1l8r7m6y34531vjdgwf67sss"; depends=[]; }; WufooR = derive2 { name="WufooR"; version="0.9"; sha256="13flcb7hwnhsnlak4m3mvwmbq2fd42027lgp8fhg25sra6dwcd7h"; depends=[dplyr httr jsonlite]; }; XBRL = derive2 { name="XBRL"; version="0.99.18"; sha256="1bwvxqbxdf1ynz2bv27l86h05h8y19q2li2y79xk819p5nkxq341"; depends=[Rcpp]; }; @@ -4839,8 +4840,6 @@ in with self; { Xplortext = derive2 { name="Xplortext"; version="1.2.1"; sha256="1c19i367vbcf8ikb364kz8488lcd5ignyagg9bhza282grhla7kn"; depends=[FactoMineR flashClust flexclust ggdendro ggplot2 gridExtra MASS slam stringi stringr tm]; }; YPInterimTesting = derive2 { name="YPInterimTesting"; version="1.0.3"; sha256="0fca963rsbs9k7ivffsqk4hzap6ll7s709kqs6aby0plghrdla2w"; depends=[MASS Rcpp]; }; YPPE = derive2 { name="YPPE"; version="1.0.1"; sha256="01q0l22nwfpld2wcygk5x28c2c6cv35hxy2fm1azn8bqsv7xy5il"; depends=[BH Formula MASS Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; - YPmodel = derive2 { name="YPmodel"; version="1.3"; sha256="1vll33nm7xynnbq15wksk9c38jhjfd6l1bbzijn5skqc5yik1r5x"; depends=[]; }; - YRmisc = derive2 { name="YRmisc"; version="0.1.5"; sha256="0vdxw67j4sx3m713s2spvj7jlk9h2g9hg4169zabfah8ni7gdman"; depends=[ggplot2 gridExtra robust]; }; YaleToolkit = derive2 { name="YaleToolkit"; version="4.2.2"; sha256="12wggdyz0wgnmxnqhp8bypyy1x1p50g49fwdzl2l43il44cdyv0g"; depends=[foreach iterators]; }; YieldCurve = derive2 { name="YieldCurve"; version="4.1"; sha256="0w47j8v2lvarrclnixwzaq98nv1xh2m48q5xvnmk7j9nsv2l3p68"; depends=[xts]; }; YuGene = derive2 { name="YuGene"; version="1.1.6"; sha256="1kv9n82wrms0c4y5fz9ckzhm1a609mnqp0pwvd0fpyscp8krmlpp"; depends=[mixOmics]; }; @@ -4876,7 +4875,7 @@ in with self; { abcADM = derive2 { name="abcADM"; version="1.0"; sha256="0vcabnnnwc0psv9v3rda5aap9s8cq1pjh02zva3ki64hlavf2a10"; depends=[BH Rcpp]; }; abcdeFBA = derive2 { name="abcdeFBA"; version="0.4"; sha256="1rxjripy8v6bxi25vdfjnbk24zkmf752qbl73cin6nvnqflwxkx4"; depends=[corrplot lattice rgl Rglpk]; }; abcrf = derive2 { name="abcrf"; version="1.8.1"; sha256="1ghbd24yhqy3xhdxas6ccn84nkavqpgldx5ck8kijknc7qjm8k27"; depends=[doParallel foreach MASS matrixStats ranger Rcpp RcppArmadillo readr stringr]; }; - abcrlda = derive2 { name="abcrlda"; version="1.0.1"; sha256="0j29ifsvmxfx2g6v4bpbb4s6miwfpf4vlkpbgj6f2q078s4clc85"; depends=[]; }; + abcrlda = derive2 { name="abcrlda"; version="1.0.2"; sha256="0zjdrbg3zx0znqnh0dvmifs9c12b8vjhbaf3nbwab9xh25nsmg75"; depends=[]; }; abctools = derive2 { name="abctools"; version="1.1.3"; sha256="07s9dg10i8lsxl73b4n2hynca2fjgb0ykb0dz8c3zv6cgw3cyx97"; depends=[abc abind Hmisc plyr]; }; abd = derive2 { name="abd"; version="0.2-8"; sha256="191gspqzdv573vaw624ri0f5cm6v4j524bjs74d4a1hn3kn6r9b7"; depends=[lattice mosaic nlme]; }; abdiv = derive2 { name="abdiv"; version="0.2.0"; sha256="053l94br8sdy30078ssncq5i5zvdxa3m72ymbwbh0cm3zmsljj29"; depends=[ape]; }; @@ -4894,11 +4893,11 @@ in with self; { accSDA = derive2 { name="accSDA"; version="1.0.0"; sha256="0sgxy5y8kkc1n35657kifwfjsba7y5m1vbr7rkk5lmbpkzahqm61"; depends=[ggplot2 ggthemes gridExtra MASS rARPACK sparseLDA]; }; accelerometry = derive2 { name="accelerometry"; version="3.1.2"; sha256="13xzrwhr4i1nj9c8vrmfdg2rmrc8n446iihcyxmy99sm99hpzyip"; depends=[dvmisc Rcpp]; }; accelmissing = derive2 { name="accelmissing"; version="1.4"; sha256="1nql9inx6azdzi3z4sfm2vdml2mms6krl8wzlf1dn1c97ahn57fy"; depends=[mice pscl]; }; - accept = derive2 { name="accept"; version="0.7.0"; sha256="1r4mhy9g4wjcjgdd0gwdarmr09292il3vdkmx0hz7vh9mffyr9kx"; depends=[dplyr extrafont MASS plotly stringr viridis]; }; + accept = derive2 { name="accept"; version="0.7.1"; sha256="0pn8q0jsi0nb2mm2kv6sjczflflshhy55y7nqqnk70yx9f6wm83y"; depends=[dplyr extrafont MASS plotly stringr viridis]; }; accrual = derive2 { name="accrual"; version="1.3"; sha256="11clm9s5c5518nmp6hd6pjnp0s28y92b2i2x0xgj4j5g816p4j3z"; depends=[fgui SMPracticals tcltk2]; }; accrued = derive2 { name="accrued"; version="1.4.1"; sha256="05g1jb5914z18rcai1ahn7nihn27vr2rnadwv94gc1j7ivvikvs5"; depends=[]; }; ace2fastq = derive2 { name="ace2fastq"; version="0.6.0"; sha256="09kk3yyqnr2xp820g0p3aai9a21figigjr9lxkr3zjq2d8gzwfic"; depends=[stringr]; }; - acebayes = derive2 { name="acebayes"; version="1.8"; sha256="1xm6bw0qm2vlcrk274x0bawzb2lnacb1wsmzba5mg3i75a55pqln"; depends=[compare lhs randtoolbox Rcpp RcppArmadillo]; }; + acebayes = derive2 { name="acebayes"; version="1.9"; sha256="1imfwm1vpbb24vfmfn1nljhmaz8429mwjihw34892p387s8h7xz2"; depends=[compare lhs randtoolbox Rcpp RcppArmadillo]; }; acepack = derive2 { name="acepack"; version="1.4.1"; sha256="1f98rpfjmhd92rdc3j004plyfpjailz6j0ycysbac0kgj83haxc2"; depends=[]; }; acfMPeriod = derive2 { name="acfMPeriod"; version="1.0.0"; sha256="1yww8isfrbs2v9s94hx7p2imyszcgadwafdgpj438n2ik0q6p9d5"; depends=[MASS]; }; acid = derive2 { name="acid"; version="1.1"; sha256="030i0y8s283ivbsmjccpbv9v7mgbcg2jk9df7vgcbbns74swf9hd"; depends=[gamlss gamlss_dist Hmisc]; }; @@ -4917,6 +4916,7 @@ in with self; { activpalProcessing = derive2 { name="activpalProcessing"; version="1.0.2"; sha256="1y0bjx2qx53iy930y9iww4q1yzjj8y16cwgixk1mq3w4g1f116d1"; depends=[chron]; }; actogrammr = derive2 { name="actogrammr"; version="0.2.3"; sha256="1jzvarmd41yqlrkagzlc8m19n5mn0w0b36fy50lyvgrfsafjfbqa"; depends=[dplyr ggplot2 lubridate readr tidyr]; }; actuar = derive2 { name="actuar"; version="2.3-3"; sha256="0aw3hlan5y22mdqk1wvnw9ksqhwp4yy5hi0dpv21p7s0hyxhphih"; depends=[expint]; }; + actuaryr = derive2 { name="actuaryr"; version="1.0.0"; sha256="19rxz2i7x51dc7r5j37av3ahf99z6swjcixs93slmjymg358r1rq"; depends=[lubridate]; }; ada = derive2 { name="ada"; version="2.0-5"; sha256="1h3a07czp0w3hrhjcg1fz721y8vsfclzqi3rq8qfzgpfb4h1f06r"; depends=[rpart]; }; adabag = derive2 { name="adabag"; version="4.2"; sha256="109wrl1pwvmyv2l909hrvk7dg4aa9pv449mvdycp50zwrsw9w0a7"; depends=[caret doParallel foreach rpart]; }; adagio = derive2 { name="adagio"; version="0.7.1"; sha256="1h9l0ddrxq8y35iy9hdkxdvdwsqpnpkzzbkbwwhm4380lq1m7a3k"; depends=[]; }; @@ -4929,6 +4929,7 @@ in with self; { adaptiveGPCA = derive2 { name="adaptiveGPCA"; version="0.1.2"; sha256="0bb6hw77dfa66b12xyazlp992gwjb1plylixlmq4cv4yjhnl9n5z"; depends=[ape ggplot2 phyloseq shiny]; }; adaptivetau = derive2 { name="adaptivetau"; version="2.2-3"; sha256="1jficl4yidix35q8yqs3pcv813wq3pg4hpw4ah4dprvg95bl7wwx"; depends=[]; }; adaptsmoFMRI = derive2 { name="adaptsmoFMRI"; version="1.1"; sha256="1h79gh1bd6s2xhwf4whh72wf2cz4di2p8dnlf6192mfg108qc6nw"; depends=[coda Matrix MCMCpack mvtnorm spatstat]; }; + add2ggplot = derive2 { name="add2ggplot"; version="0.3.0"; sha256="0c94i1cfp2pvplvxmfvvz2fyj026r1jnax05mrzrc7ppnqzy25y0"; depends=[ggplot2 magick magrittr RColorBrewer zeallot]; }; addhaz = derive2 { name="addhaz"; version="0.5"; sha256="1709jq9rp5lhqk0qpk8zkdwzhcv1bcach8mm7yiz7hzcc1mgxb12"; depends=[boot MASS Matrix]; }; addhazard = derive2 { name="addhazard"; version="1.1.0"; sha256="0hk7br52wjmq605xgslv8lspr35aqpdgkiz2yljz31khy3y3vi8c"; depends=[ahaz rootSolve survival]; }; addinsOutline = derive2 { name="addinsOutline"; version="0.1.6"; sha256="125qfqbpv5xflw8qlyh8m3iyd6biyp3arls3z7y8bqkbghifl730"; depends=[dplyr DT fs miniUI rmarkdown rstudioapi shiny shinyFiles stringr tibble yaml]; }; @@ -4936,12 +4937,12 @@ in with self; { additiveDEA = derive2 { name="additiveDEA"; version="1.1"; sha256="15nxpdybsda6yhjk23bpafr8v1zdx8332pcxf26k795q3ypjpiy2"; depends=[Benchmarking lpSolveAPI]; }; additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; }; addreg = derive2 { name="addreg"; version="3.0"; sha256="13bwmgxylwi02g60j1rr51cr5jvvkl2nvf2lnnhnq46fhvs2ma7s"; depends=[combinat glm2 turboEM]; }; - ade4 = derive2 { name="ade4"; version="1.7-13"; sha256="16z9jk4qj35ghsk4lwmq241dgc770y8a70dlmp9q4gz6d8ssgl7m"; depends=[MASS]; }; + ade4 = derive2 { name="ade4"; version="1.7-15"; sha256="1xpxznlqm8wb4d5z2dcrl0wi3jjciq2hr5rcx2b5aaipiiyzm1ij"; depends=[MASS pixmap sp]; }; ade4TkGUI = derive2 { name="ade4TkGUI"; version="0.3-0"; sha256="1k1d5vck8plv6rq9nn664p73nhd4k3kah52fvqc3vg2zv1hbizzk"; depends=[ade4 adegraphics lattice tkrplot]; }; adeba = derive2 { name="adeba"; version="1.1.2"; sha256="1z1law3qh6l902g62y8yapk4nypdmb20jmpwhxp9jbglalw9lm73"; depends=[mixtools pdist Rcpp]; }; adegenet = derive2 { name="adegenet"; version="2.1.2"; sha256="01fgrgbiddz2q4l3mx637hhwbs7r0c43yw7vpwl8p8pwbm3nykz0"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; adegraphics = derive2 { name="adegraphics"; version="1.0-15"; sha256="12k77x6vnjz9s9dvz1r81ajqcl1nh9g33r7dymaqk2cs5q3wvfw7"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; - adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.16"; sha256="0qzgshdlayx28j4ziivv1fy925bvbfnqk6dbd1wx5vjgp3c32ppg"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; + adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.18"; sha256="0ss3fhpa7i2m4g55ajy9pgwgj393jbw58khgywc3gw9ys53h02sd"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; adehabitatHS = derive2 { name="adehabitatHS"; version="0.3.15"; sha256="1qhdwyjic4q24kk0pwrd0r8vdg5clv4g1hbdq07rl71jbcscdhvz"; depends=[ade4 adehabitatHR adehabitatMA sp]; }; adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.25"; sha256="1v83iw9argh11fi47hlb8ykigd8xh70hww3i4j8yrzfqwcr9aj4p"; depends=[ade4 adehabitatMA CircStats sp]; }; adehabitatMA = derive2 { name="adehabitatMA"; version="0.3.14"; sha256="0lfqg9g0wpq70md35b7gdgav3lliaxv8c8i13j3k0q436ids68iy"; depends=[filehash sp]; }; @@ -4949,16 +4950,16 @@ in with self; { adepro = derive2 { name="adepro"; version="2.0.0"; sha256="0q9h7wmkgdnbhg2ygw32jl0bm2vrl32ig2nci9pphgwpsfzb34jq"; depends=[audio Cairo MASS shape shiny shinyBS]; }; adept = derive2 { name="adept"; version="1.1.2"; sha256="0j8sd337j2c583pnwsfgc4r2251y8s5s4pkx79ifrhyc7c2qgfai"; depends=[dplyr dvmisc future magrittr tibble]; }; adeptdata = derive2 { name="adeptdata"; version="1.0.1"; sha256="07146kv1llj5kci7s7v2jrqd7bl6h3rczx43nha5fhr57ldpcm40"; depends=[]; }; - adespatial = derive2 { name="adespatial"; version="0.3-7"; sha256="0chbz14jii0gra6f7zncjrd1m2d2n5wwpq1ihjnwwk8jvyqskd1a"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep vegan]; }; + adespatial = derive2 { name="adespatial"; version="0.3-8"; sha256="01i90802w98zyni6krcngk49f5jgi267w64l0wm8c2izrq4k5zg3"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep vegan]; }; adfExplorer = derive2 { name="adfExplorer"; version="0.1.4"; sha256="11z6jm20giqmmz4dwcpa9fshvrmlmv8m0y1vg053nch05884niz2"; depends=[]; }; adhoc = derive2 { name="adhoc"; version="1.1"; sha256="0a59fv9glcqh4zzd0887ndrhlcaylja6vay2ifajp8an29gjk1vv"; depends=[ape pegas polynom]; }; adimpro = derive2 { name="adimpro"; version="0.9.2"; sha256="1ajq2889y70lxjdpf5zdg7zkz35i3i92li72wb7nbfngxmw47xzv"; depends=[awsMethods]; }; - adiv = derive2 { name="adiv"; version="1.4"; sha256="1gavg22hd0szxqiqws67j993xclgw79ifbqk0108nj13vjfj07kh"; depends=[ade4 adegraphics adephylo ape cluster FactoMineR phylobase phytools rgl]; }; + adiv = derive2 { name="adiv"; version="2.0"; sha256="1lp5vylqj8n29smjp3611gxw0nfgk5blcwrhk3c73w1v6695488b"; depends=[ade4 adegraphics adephylo ape cluster FactoMineR phylobase phytools rgl]; }; adjclust = derive2 { name="adjclust"; version="0.5.9"; sha256="1nrsl9ca7729qfmxi5xzsvkqrx3dkjyr3al4vz3iqphfxv9sdl4h"; depends=[capushe Matrix matrixStats]; }; adjustedcranlogs = derive2 { name="adjustedcranlogs"; version="0.1.0"; sha256="08apfvpqvnnalx230p4qf5ckrwm1sgzras4zfrysgym5d4map9ci"; depends=[cranlogs dplyr lubridate rvest xml2]; }; adklakedata = derive2 { name="adklakedata"; version="0.6.1"; sha256="1lzj3ib4bgfkq5lq12n47pwc52h7k35xbbwj6brwsgx1gd4fx3x6"; depends=[httr rappdirs]; }; adlift = derive2 { name="adlift"; version="1.4-1"; sha256="14q7fnhlqvxdhnfjhdhfmadz241srplbm069a7ybbsql21cphpf3"; depends=[EbayesThresh]; }; - admisc = derive2 { name="admisc"; version="0.5"; sha256="0jqlac39rbvxi6xhyadkyxwmpjcpgl6fl8dn2yjnnn0qgs61y5c3"; depends=[]; }; + admisc = derive2 { name="admisc"; version="0.6"; sha256="084qr3wb2zh5f11awvnx4lqhss9qvb9vxa6x7z9nzzy0cl2nd4kg"; depends=[]; }; admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; }; admmDensestSubmatrix = derive2 { name="admmDensestSubmatrix"; version="0.1.0"; sha256="1a5lfm10aj6wdjibdnmffn75zvy6x69w8nqcx2i23gxg6v0xlqcl"; depends=[Rdpack]; }; adnuts = derive2 { name="adnuts"; version="1.0.1"; sha256="1l52f33yzbvcz27iw0k6iwcnfanr65lw206d7w4609k2vmlw8ink"; depends=[ellipse R2admb rstan]; }; @@ -4975,7 +4976,7 @@ in with self; { afex = derive2 { name="afex"; version="0.26-0"; sha256="0h3p1svgk1ap3lj08fi8nzdb3710h99bv150krf1x8wci1a0r1if"; depends=[car lme4 lmerTest pbkrtest reshape2]; }; affluenceIndex = derive2 { name="affluenceIndex"; version="1.0"; sha256="1nb2dlsnvjsvkyrfdaskmpr3kv3qgdfb60xgmzvscfli0yf4dzr1"; depends=[]; }; afmToolkit = derive2 { name="afmToolkit"; version="0.0.1"; sha256="1pm3xyh9vq10mmfgknlvlfr9f027xprrgy1dvbbxpi7f111hv1gl"; depends=[assertthat DBI dplyr ggplot2 gridExtra minpack_lm scales tibble]; }; - afpt = derive2 { name="afpt"; version="1.0.0"; sha256="0kshyzvw8sp7p686xi98g758zld3n7kq44lnvly8d0y8fg6ahcl2"; depends=[]; }; + afpt = derive2 { name="afpt"; version="1.1.0.0"; sha256="0q8asx5qkw7l01qrb2gbwadsbhlgj7mh32sr8xi28v7jlpncj627"; depends=[]; }; aftgee = derive2 { name="aftgee"; version="1.1.3"; sha256="1zkb99938q8pp318a0c0bpgzcqxc8ijygfz904lz6n40c5i2i9lz"; depends=[BB geepack MASS survival]; }; agRee = derive2 { name="agRee"; version="0.5-2"; sha256="1fhpkhnq8gbdy8k2w5wwn7h7gj0mmvk052fqxfazksxrlqicbbhb"; depends=[coda lme4 miscF R2jags]; }; aggregation = derive2 { name="aggregation"; version="1.0.1"; sha256="0j9g604m2ccc7hcy02539yja9cf3xcbl25gvp838bp4x8w18my46"; depends=[]; }; @@ -4992,16 +4993,18 @@ in with self; { ahp = derive2 { name="ahp"; version="0.2.12"; sha256="0zjhgl0smzx4bkhmdm4rmpyrq4hmxy1nkxvwqjr40pz7vm69icqx"; depends=[data_tree DiagrammeR formattable yaml]; }; ahpsurvey = derive2 { name="ahpsurvey"; version="0.4.1"; sha256="1r7x4c318nzbx0ppm9272kfpz2bln1cafkv9irnj85nsdcravr33"; depends=[dplyr knitr magrittr randomNames Rdpack tidyr]; }; aiRthermo = derive2 { name="aiRthermo"; version="1.2.1"; sha256="058082qdfi1pbdgf26vbfahri1kbc8b2l816q4dq89j5aj5is0a2"; depends=[]; }; + aibd = derive2 { name="aibd"; version="0.1.7"; sha256="0hylhjfqb3l11cjjsamcd4j0w4ai6qrplzg7ys8r73x1wmhrr9as"; depends=[commonsMath rscala]; }; aidar = derive2 { name="aidar"; version="1.0.5"; sha256="1q2iz2qzh2yl0v0sc537xq4vbx2nblym3kv419vr7jvrghdpx3vj"; depends=[XML]; }; aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; }; aimsir17 = derive2 { name="aimsir17"; version="0.0.1"; sha256="0d3zygsnflymmfh7pflnynsf1klxjjyrqz5g5fnj2vwsicb40l4x"; depends=[tibble]; }; - airGR = derive2 { name="airGR"; version="1.4.3.52"; sha256="0rknrfpyb6qs0ppai8qvqqvf89cvz8f4wk1xf03ks0i4aln1np44"; depends=[]; }; - airGRteaching = derive2 { name="airGRteaching"; version="0.2.6.29"; sha256="15sjwkyvgxihiz35qc8rg1f7f3vb4wdwbrfb37gx8mzql0mwqx4q"; depends=[airGR dygraphs markdown plotrix shiny shinyjs xts]; }; + airGR = derive2 { name="airGR"; version="1.4.3.65"; sha256="1x9zf6bbcaflszqzaki940xy33g4wj4yqsgbg836a1dwv1crd1l7"; depends=[]; }; + airGRteaching = derive2 { name="airGRteaching"; version="0.2.8.69"; sha256="0z2iwqr0qm9wv7hl337l0kbjnc9h0pjahwnk3y89x8frisa2cc32"; depends=[airGR dygraphs markdown plotrix shiny shinyjs xts]; }; aire_zmvm = derive2 { name="aire.zmvm"; version="0.8.2"; sha256="0z9knqdl7ihx2vph154qi1lh4s6yvlcw6kwry8k47mhh3p7pynsd"; depends=[dplyr httr lubridate progress readr readxl rvest sp stringr tidyr xml2]; }; airportr = derive2 { name="airportr"; version="0.1.3"; sha256="1h8h0cdfqgxv8cf9hp82sx5n4a1z88qyyxicj7d2kmmybqqz2r5n"; depends=[dplyr]; }; + airqualityES = derive2 { name="airqualityES"; version="1.0.0"; sha256="1kf673ajk06ggy9524lip5flpfgq0gql7d46kgnri8l3kbzw7zcj"; depends=[tibble]; }; airr = derive2 { name="airr"; version="1.2.0"; sha256="1vswbjmyhygmyqymkfxad9nwsbcgaggian1fyrx63w0y9c4dfv1h"; depends=[readr stringi yaml]; }; ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; }; - akc = derive2 { name="akc"; version="0.9.3"; sha256="15sams52pzf5d0b1nmixff9xddgl1c1xdni9s1vfj0vnrf64kkn1"; depends=[data_table dplyr ggforce ggplot2 ggraph igraph magrittr rlang stringr textstem tibble tidygraph tidytext widyr]; }; + akc = derive2 { name="akc"; version="0.9.4"; sha256="1bvlj3h1fa3n9dkfhr5zhh8j3m8wafr6370sfg24vjwmiqpmx96j"; depends=[data_table dplyr ggforce ggplot2 ggraph ggwordcloud igraph magrittr rlang stringr textstem tibble tidygraph tidytext widyr]; }; akima = derive2 { name="akima"; version="0.6-2"; sha256="1klprj4a2pgy5pwdwnrn3siisi2lh8hr4z6vz38sdvjkcmakxnk1"; depends=[sp]; }; akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; }; akmedoids = derive2 { name="akmedoids"; version="0.1.5"; sha256="0yn5rjgb5rrhphgbjn49098ybkmzda6yxzfqgbsppfgjidrafhza"; depends=[ggplot2 Hmisc kml longitudinalData reshape2 signal]; }; @@ -5021,6 +5024,7 @@ in with self; { alleHap = derive2 { name="alleHap"; version="0.9.9"; sha256="1fqrw645s3f5363p7jl3dzy8xphxdr1v6wdsjmqcqwpgvjqfr2zz"; depends=[abind]; }; allelematch = derive2 { name="allelematch"; version="2.5.1"; sha256="00117cj01psax4rjvy2nja5r2ss9l8zzjicczh46kp401i1ghmwc"; depends=[dynamicTreeCut]; }; allelic = derive2 { name="allelic"; version="0.1"; sha256="0xs4kd3vqb5ph8kqc3lcqgirrdkz8b627pvnczvci2g0sr3cl18j"; depends=[]; }; + allestimates = derive2 { name="allestimates"; version="0.1.6"; sha256="1jrp5nh9g2alx8aycysiymhylm2r7lqf8s68ppbgy6liw3iazym2"; depends=[broom dplyr ggplot2 MASS speedglm stringr survival tibble tidyr]; }; alluvial = derive2 { name="alluvial"; version="0.1-2"; sha256="039frwrsxq1lb97s7vf2vbyyadimkigs628ymym06fxka53drdkp"; depends=[]; }; alpaca = derive2 { name="alpaca"; version="0.3.2"; sha256="07r13gyqb876p6zx3pydl414zrgc473dnyn5ja6hmzjmkv19lw4k"; depends=[data_table Formula MASS Rcpp RcppArmadillo]; }; alphaOutlier = derive2 { name="alphaOutlier"; version="1.2.0"; sha256="09yrbv7jsiymw5gzp8p92ki70v1fys2k75x4sb9s7wy3c58wn1cd"; depends=[nleqslv quantreg Rsolnp]; }; @@ -5028,7 +5032,7 @@ in with self; { alphahull = derive2 { name="alphahull"; version="2.2"; sha256="024d70z9pasyfp83zwgh7fkjky70l74pbzw1wvazzq75p9m91vzv"; depends=[ggplot2 R_utils sgeostat spatstat splancs tripack]; }; alphashape3d = derive2 { name="alphashape3d"; version="1.3"; sha256="15l8hsn3jcn5jzwfpya99v2mzrgmhl3i587nw6cx4aky75ajslcx"; depends=[geometry rgl]; }; alphastable = derive2 { name="alphastable"; version="0.2.1"; sha256="01gwrcxlj2jlb8axs5qmrsixk3a8b7044ypyjg6dpdcxfbcf5fvp"; depends=[mvtnorm nlme nnls stabledist]; }; - alphavantager = derive2 { name="alphavantager"; version="0.1.1"; sha256="0rbvbws0g50z76pvkydadf97gq5yg1l03xlfqyy3yblqh59cj5s6"; depends=[dplyr glue httr jsonlite purrr readr stringr tibble tidyr timetk]; }; + alphavantager = derive2 { name="alphavantager"; version="0.1.2"; sha256="0c97p8njga4xffvsa0kj0s4y0agjr44y9bnjxs5phm1ldcqjs0yj"; depends=[dplyr glue httr jsonlite purrr readr stringr tibble tidyr timetk]; }; alr3 = derive2 { name="alr3"; version="2.0.8"; sha256="1vkwgf5c9zb8pphcw47vfwwk12nfj4nggj8dr88jwbdnv7yd257h"; depends=[car]; }; alr4 = derive2 { name="alr4"; version="1.0.6"; sha256="0v98yzi0fcjxq0ak0w05001h8m9nfa9l0ann9bqvz8bwcmb3jlr2"; depends=[car effects]; }; altR2 = derive2 { name="altR2"; version="1.0.0"; sha256="15nvbq3n76p2857ipyf3q6rs2mwjqsp9gr3rmzbjfm8lrj0faxsv"; depends=[gsl purrr]; }; @@ -5047,37 +5051,34 @@ in with self; { ammistability = derive2 { name="ammistability"; version="0.1.1"; sha256="1vp2857cwn4dd86vj8qf6h4z8hh5q2jvrlpmply8bf70mnmnq18h"; depends=[agricolae ggcorrplot ggplot2 Rdpack reshape2]; }; ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; }; ampir = derive2 { name="ampir"; version="0.1.0"; sha256="1z9ha329fbji9jlly84cn7z2fxclk3n3w0xddq1mw1gqq3dyb8ba"; depends=[caret kernlab Peptides Rcpp]; }; - amt = derive2 { name="amt"; version="0.0.7"; sha256="1az11vi5kd1sp76xvgshvamyw59dydhp6g4m6c2wqcdll88dlfgn"; depends=[broom checkmate circular ctmm dplyr fitdistrplus FNN geosphere glue KernSmooth lazyeval leaflet lubridate magrittr maptools purrr raster Rcpp rgeos rlang sf sp survival tibble tidyr velox]; }; anMC = derive2 { name="anMC"; version="0.2.2"; sha256="0ab215nrqn535g9ayqzvgdckhwcrij1mc1296pvlj3grn3f8rhws"; depends=[mvtnorm Rcpp RcppArmadillo]; }; anacor = derive2 { name="anacor"; version="1.1-3"; sha256="0mj8g9p4fla0ax9jvcq7kii4lrhj8g872p11nys06anva22qjp51"; depends=[car colorspace fda]; }; - analogsea = derive2 { name="analogsea"; version="0.7.2"; sha256="1dfvdizbxdc00rcabcv1jpy3py4ncb3g2p1kim8m4sy9rdc299yq"; depends=[aws_s3 httr jsonlite magrittr yaml]; }; - analogue = derive2 { name="analogue"; version="0.17-3"; sha256="1dd94hs517f7a11zjxm7wygcc1g72r5hff4figgmqf8c699p5d9y"; depends=[brglm lattice MASS mgcv princurve vegan]; }; + analogsea = derive2 { name="analogsea"; version="0.8.0"; sha256="1naw9qh6rp1hz3mk19jir0qia1daizbfa695qbp1sg6rdh6is8ag"; depends=[httr jsonlite magrittr yaml]; }; + analogue = derive2 { name="analogue"; version="0.17-4"; sha256="02n4imkkfa4gqzwicvz3dpcfwk68rbh48pj5vn6cx6q15bzxdv0i"; depends=[brglm lattice MASS mgcv princurve vegan]; }; analogueExtra = derive2 { name="analogueExtra"; version="0.1-1"; sha256="1s3qs10hf6hkna0bicid1mc8x8r449bl93xpgyw6lnsjgh2yx62c"; depends=[analogue rgl vegan3d]; }; analysisPipelines = derive2 { name="analysisPipelines"; version="1.0.0"; sha256="1q0xhqzc2x3kvz6kray7ckm2i88k488jicsw7wngnywmjhl4z3ni"; depends=[devtools dplyr futile_logger ggplot2 magrittr pipeR proto purrr RCurl rlang]; }; - analytics = derive2 { name="analytics"; version="3.0"; sha256="0js3c8lwj3knccb55nq03cbjlf4w390p9aid2mi5x80l3ayd9in1"; depends=[car cluster fractal lmtest MASS np powerplus robust trend TSA urca VIM]; }; analyz = derive2 { name="analyz"; version="1.4"; sha256="0qdh1gld2dkl0krbhm2vcqg8dfs03dn51rclgsw02554s06dlgxw"; depends=[]; }; anapuce = derive2 { name="anapuce"; version="2.3"; sha256="05k3ypy4dc8q4jv0by37k66pdwb1wmsd24i6nciris5knfdy9csg"; depends=[]; }; anchoredDistr = derive2 { name="anchoredDistr"; version="1.0.3"; sha256="07q4np0zryb49cpi7w5iz0qna63cyp9nz13d8ws6x9ccg417r99a"; depends=[DBI dplyr ggplot2 np plyr reshape2 Rmisc RSQLite]; }; anchors = derive2 { name="anchors"; version="3.0-8"; sha256="12gd2526y7s2a8i6b9xma2c3sc6zxnwzl6sn8b50hbxizwr8d34j"; depends=[MASS rgenoud]; }; andrews = derive2 { name="andrews"; version="1.0"; sha256="130i86qkdy1xpcf611jpzqgmd17iik7j7spdcfwzk48f31biyp8v"; depends=[]; }; anesrake = derive2 { name="anesrake"; version="0.80"; sha256="1p2g51w80jiadlf4asbnsw46asarzlzr5c1yfhdb31ymqxd7p76q"; depends=[Hmisc weights]; }; - anfis = derive2 { name="anfis"; version="0.99.1"; sha256="1v8di5dzwb1g1ldi7idcmmr9nirp9kxvc8km1qq1i8zaw1bh8pqb"; depends=[]; }; angstroms = derive2 { name="angstroms"; version="0.0.1"; sha256="1k8q4pkb5vcjfp2n2dga3q2ydmdxv020k5qzrb6w01ixrgf15d8l"; depends=[nabor ncdf4 proj4 raster sp spbabel]; }; aniDom = derive2 { name="aniDom"; version="0.1.4"; sha256="1h19q3f16g6kacawd2i9i5lg64q436dsbzk9isf3p2mr7p24xbas"; depends=[rptR]; }; anim_plots = derive2 { name="anim.plots"; version="0.2.1"; sha256="0z811y4zzrqas1ynrq4syhxvbcw2girxa6g9biry9d0qgq1w8cp1"; depends=[animation]; }; animalTrack = derive2 { name="animalTrack"; version="1.0.0"; sha256="0jlvfflpaq64s48sblzh1n1vx8g3870iss97whigri29s6hn79ry"; depends=[rgl]; }; animation = derive2 { name="animation"; version="2.6"; sha256="02jv4h9hpp8niw9656r5n36kqr71jbyynxnywkkkdi0aj8w3cach"; depends=[magick]; }; animint2 = derive2 { name="animint2"; version="2019.7.3"; sha256="13s6s0py5hfywgknl0521d0xhdb86988pqwymwsw054l9xhp5dns"; depends=[digest gtable lazyeval MASS plyr reshape2 RJSONIO scales tibble]; }; - anipaths = derive2 { name="anipaths"; version="0.9.7"; sha256="1h6rcrybjfc4kn377bay2c3nfv6qwwi0nk14xh6jfdsxqybq6dw2"; depends=[animation ggmap knitr mgcv RColorBrewer rgdal scales sp]; }; + anipaths = derive2 { name="anipaths"; version="0.9.8"; sha256="02d2z236gjh40p29h86ikspnxim49c3c33r4dnf3yzns622ckm2c"; depends=[animation ggmap mgcv raster RColorBrewer scales sp]; }; anocva = derive2 { name="anocva"; version="0.1.1"; sha256="1byg40jla71k1901js5h9yq89j63d00vkm60id1fxlpv95c4wdrr"; depends=[cluster]; }; anoint = derive2 { name="anoint"; version="1.4"; sha256="10gdqgag9pddvxh80h458gagvv1474g4pcpa71cg3h7g62rqvmv5"; depends=[glmnet MASS survival]; }; anomalize = derive2 { name="anomalize"; version="0.2.0"; sha256="155la2j9bfdwvaq8qv8gjgfy0y4bjpvrymgk0qzbz80hd771lh2j"; depends=[cli crayon dplyr ggplot2 glue purrr rlang rstudioapi sweep tibble tibbletime tidyr timetk]; }; - anomaly = derive2 { name="anomaly"; version="2.0.2"; sha256="1vhbmf1q2rj21bxzh7s969x3j21r8i5crnvzndal4pryyb8bm97a"; depends=[assertive BH dplyr ggplot2 Rcpp Rdpack reshape2 rlang robust]; }; + anomaly = derive2 { name="anomaly"; version="3.0.0"; sha256="06zpb1sawzb9ss99a1ny0r7x6dz3dvzsdib9mkbc9f32wlc0yg7v"; depends=[assertive BH cowplot dplyr ggplot2 Rcpp Rdpack reshape2 rlang robustbase]; }; anominate = derive2 { name="anominate"; version="0.6"; sha256="01p2qkqf88bzhwywyass5r8dwg2ycflmkbzmsps7fzy0kv3xyb02"; depends=[coda MCMCpack pscl wnominate]; }; - antaresEditObject = derive2 { name="antaresEditObject"; version="0.1.7"; sha256="0whwlqsjc9ygh2iv9bmgxglqk061l3mgfsq1a0848180wci6frwb"; depends=[antaresRead assertthat data_table whisker]; }; - antaresProcessing = derive2 { name="antaresProcessing"; version="0.17.0"; sha256="0mq2b1dkkgli8d53mpcllilh72gf8189f5mf0dxjcv4qinnhrrvm"; depends=[antaresRead data_table stringi]; }; - antaresRead = derive2 { name="antaresRead"; version="2.2.4"; sha256="0vi7g3mz92djxhraii788j4ialyvq013cw0grwndp2rz2bmxmgd8"; depends=[bit64 data_table lubridate plyr shiny stringr]; }; - antaresViz = derive2 { name="antaresViz"; version="0.15.0"; sha256="16gf5spgx56rgf2d25zv5dihhbbgvfxryswfqa4gjlpjc2827zar"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly rAmCharts raster rgeos shiny sp spMaps webshot]; }; + antaresEditObject = derive2 { name="antaresEditObject"; version="0.1.9"; sha256="09zmhzfdzxpp01wmdk230gff6zwgd5p2w3ppbq3a0df3f56x0hix"; depends=[antaresRead assertthat data_table whisker]; }; + antaresProcessing = derive2 { name="antaresProcessing"; version="0.18.0"; sha256="1rw7g4706g4fdx7c7magxqj71h6iwkbslmyrqfwna4irnifjmv7g"; depends=[antaresRead data_table]; }; + antaresRead = derive2 { name="antaresRead"; version="2.2.5"; sha256="10c3ql08211ylc271xk8ffnix3pzmnaylgf0ynwayp34hkgkf37h"; depends=[bit64 data_table lubridate plyr shiny stringr]; }; + antaresViz = derive2 { name="antaresViz"; version="0.15.1"; sha256="1qak4gkqpglmpavm5xm0amszqfzm3zgapxk81l5gn6ff9ilby7fp"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly rAmCharts raster rgeos shiny sp spMaps webshot]; }; anthro = derive2 { name="anthro"; version="0.9.2"; sha256="15857msr80wqikf2rr7db3f8hhfwnaay10wnj27yig0yls46a99f"; depends=[survey]; }; antitrust = derive2 { name="antitrust"; version="0.99.11"; sha256="025pm7n06yid28b34llm4rh0mlz0daz9ygh5z0hd87scp8f9gy00"; depends=[BB evd MASS numDeriv rhandsontable shiny]; }; antiword = derive2 { name="antiword"; version="1.3"; sha256="034znb0g9wwb8gi1r3z75v3sbb4mh83qrc4y8mbfx5lbgh8zhj6j"; depends=[sys]; }; @@ -5085,6 +5086,7 @@ in with self; { anytime = derive2 { name="anytime"; version="0.3.7"; sha256="0vkckxaq1ga73iszwr4lyf12c1cann1w9lhflz4p3xdgx468fzb9"; depends=[BH Rcpp]; }; aod = derive2 { name="aod"; version="1.3.1"; sha256="1g03ajhs6bid80i83xn3917abhymzgrydqx86wxxpkqga018hb85"; depends=[]; }; aods3 = derive2 { name="aods3"; version="0.4-1.1"; sha256="1kdmgzd5nkzm0awdjls6fc8p9hxsph9ha9k1jxbppdi4i6f0i7rv"; depends=[boot lme4]; }; + aof = derive2 { name="aof"; version="0.1.2"; sha256="0552i5wvm04dq8a8y1x36sprc9cbx6k7c3bmsgqxm71dpsxajb0i"; depends=[bcpa]; }; aoos = derive2 { name="aoos"; version="0.5.0"; sha256="0y92vs27i0mkpjdclqzq4j9g1axkymhi3v8xp1v6hazh35yzjkfj"; depends=[magrittr roxygen2]; }; aoristic = derive2 { name="aoristic"; version="0.6"; sha256="0b9h2l59vvrvbjjwwb43j74frvwa8lsj4x5kwhwpsfjfch1yqwjl"; depends=[classInt ggplot2 GISTools lubridate maptools MASS plotKML RColorBrewer reshape2 rgdal sp spatstat]; }; apTreeshape = derive2 { name="apTreeshape"; version="1.5-0"; sha256="0mnydk157557pnkjvcadlghn5d8w9kxas4kwz4y4w21xg7z1jrig"; depends=[ape coda cubature pbapply quantreg]; }; @@ -5092,7 +5094,7 @@ in with self; { apaTables = derive2 { name="apaTables"; version="2.0.5"; sha256="0h986jqdl65fd33gfa433ik77r6lm9zrq75qfk5r8xsdgzb4wgva"; depends=[boot broom car dplyr tibble]; }; apaText = derive2 { name="apaText"; version="0.1.1"; sha256="1r217k60w027i63nbj24b1rm37m4qf7a6iirc941s945babkxcmb"; depends=[dplyr]; }; apc = derive2 { name="apc"; version="1.3"; sha256="1hgkqkvry9is8kjk2w46k637sig7fdznnc75wbrc8bq1hbrmf785"; depends=[lattice]; }; - apcf = derive2 { name="apcf"; version="0.1.3"; sha256="0wpq0739bpiqqlkl18c81x2g1g4k7xkam03vpj46wmmpa4z0glaa"; depends=[Rcpp]; }; + apcf = derive2 { name="apcf"; version="0.1.4"; sha256="0hylflzcfb2ziys5fdnwqlcmlzs45mch1plb5p0wf2aq5p8cdlx7"; depends=[Rcpp]; }; apcluster = derive2 { name="apcluster"; version="1.4.8"; sha256="0lzf2jqm56i74wif6x5sw3j0w2qc4sni49zq2fgbl89b7lwkvchj"; depends=[Matrix Rcpp]; }; apdesign = derive2 { name="apdesign"; version="1.0.0"; sha256="041zyd7ih9nnj92jj9vb9ya1ij9lmj1dzx64q74vyiadw1ix5l66"; depends=[Matrix]; }; ape = derive2 { name="ape"; version="5.3"; sha256="08wbk1kxhs32bmmvqlqanbdg1w235amd35k8m00fngsj9h9xzc08"; depends=[lattice nlme Rcpp]; }; @@ -5104,8 +5106,7 @@ in with self; { aplpack = derive2 { name="aplpack"; version="1.3.3"; sha256="010saim43d3hr83ksi916846rh6qfbb0gvhsf5jbdx95m4bai9g3"; depends=[]; }; apmsWAPP = derive2 { name="apmsWAPP"; version="1.0"; sha256="1azgif06dsbadwlvv9nqs8vwixp6balrrbpj62khzmv1jvqr4072"; depends=[aroma_light Biobase DESeq edgeR genefilter gtools multtest seqinr]; }; apng = derive2 { name="apng"; version="1.0"; sha256="13hvr1w566anrhdicaqwqjgfq2lk3zkn5gcfgy8zazjnad4vy07y"; depends=[bitops]; }; - apollo = derive2 { name="apollo"; version="0.0.9"; sha256="1gzwfra74bb8jihc75lgymf5m194xmk6wz7p9mhjchgvb98czjqz"; depends=[coda maxLik mnormt mvtnorm numDeriv randtoolbox Rcpp RcppArmadillo RcppEigen RSGHB sandwich]; }; - apparent = derive2 { name="apparent"; version="1.1"; sha256="03n3pq620xg1vykzsmvxp6wr9hs561pl5ds50g7zmxk9z0ijcb32"; depends=[outliers]; }; + apollo = derive2 { name="apollo"; version="0.1.0"; sha256="0i80js5gxz3rj6977iwnm7pi9qgq2iz4h83nz8301ra94g7kjv40"; depends=[coda Deriv maxLik mnormt mvtnorm numDeriv randtoolbox Rcpp RcppArmadillo RcppEigen RSGHB sandwich]; }; apple = derive2 { name="apple"; version="0.3"; sha256="194z2f6hwdjjxdkjwlmfhpfp26p9yp3gparklhdbb6zlb4a9nnhz"; depends=[MASS]; }; appnn = derive2 { name="appnn"; version="1.0-0"; sha256="0wkpr6lcd68wlzk6n622ab7sd99l837073czn4k56hw8bw9v68j3"; depends=[]; }; approximator = derive2 { name="approximator"; version="1.2-7"; sha256="0smqjdla9mvzy164nsb0pw0sgal3w2wnyhqidp74h0smyczrr1zw"; depends=[emulator mvtnorm]; }; @@ -5116,37 +5117,33 @@ in with self; { apsimr = derive2 { name="apsimr"; version="1.2"; sha256="14vhsm6am2c2q2sgabnhxr0lgldifss0anjpisrhjqk04njllviy"; depends=[ggplot2 lubridate MASS mgcv reshape2 XML]; }; apsrtable = derive2 { name="apsrtable"; version="0.8-8"; sha256="1qmm89npjgqij0bh6p393wywl837lfsshp2mv9b5izh1sg2qfwvw"; depends=[]; }; apt = derive2 { name="apt"; version="2.5"; sha256="1y18bqnnxy5p0xx9gbfrnrzq3nlhw3psl5zlibrw6lfhb8lxd4mk"; depends=[car copula erer gWidgets urca]; }; - aptg = derive2 { name="aptg"; version="0.1.0"; sha256="06z8041h1k9v0ymd7azn11xzhqxb8lda4r7nyg51h8z3i8mpq1ba"; depends=[ape brranching phytools taxize xml2]; }; - apyramid = derive2 { name="apyramid"; version="0.1.0"; sha256="0r0mx5m3jwjdw0npvlch4h6n73sy277wzcrffm6zz0ki9rkm0can"; depends=[dplyr forcats ggplot2 glue rlang scales tidyselect]; }; - aqfig = derive2 { name="aqfig"; version="0.8"; sha256="0ha0jb5ag3zx6v7c63lsm81snslzb8y8g565mxjmf7vxpcmzzqsi"; depends=[geoR]; }; + apyramid = derive2 { name="apyramid"; version="0.1.1"; sha256="0lqmk2cm4dflzq1f67mfdxpq9slfz2k9fnsvhrwb5dj5kw2az3i6"; depends=[dplyr forcats ggplot2 glue rlang scales tidyselect]; }; aqp = derive2 { name="aqp"; version="1.19"; sha256="1z5qbzhsn79xz17i53hy48xnwf64k5cc24jxwvysyv8p2ylrir0i"; depends=[cluster digest lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; aqr = derive2 { name="aqr"; version="0.4"; sha256="04frgil3nbxsww66r9x0c6f308pzqr1970prp20bdv9qm3ym5axw"; depends=[RCurl xts]; }; ar_matrix = derive2 { name="ar.matrix"; version="0.1.0"; sha256="1d531hkl50szfa1q0zbp8dp1a9jli63kwvxjgc9n0ar279y47qdz"; depends=[MASS Matrix sp sparseMVN]; }; arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; arc = derive2 { name="arc"; version="1.2"; sha256="1advs0aqxh84c5n9akww8cdafh7npgaibrb42wncwhv9nfi7wy1v"; depends=[arules discretization Matrix R_utils]; }; archdata = derive2 { name="archdata"; version="1.2"; sha256="0igh6qy3yv5hzprj9izpkqp3f6jkb7pydqzmnl8sqhqjqvb3lnij"; depends=[]; }; - archetypal = derive2 { name="archetypal"; version="1.0.0"; sha256="1b5c881balv4p0zr7bgg741mzfnw5fvg6ns303rsqashydxcnyiv"; depends=[doParallel geometry inflection lpSolve Matrix]; }; + archetypal = derive2 { name="archetypal"; version="1.1.0"; sha256="1x1642p2l19drp22mi1pci7v3s19j885pkx0s2kn7aawpjfis9nw"; depends=[doParallel geometry inflection lpSolve Matrix plot3D]; }; archetypes = derive2 { name="archetypes"; version="2.2-0.1"; sha256="0ibxsr173ib77gjhid91m85s8gjii4mi2w3d52q5301igv20p7r0"; depends=[modeltools nnls]; }; archiDART = derive2 { name="archiDART"; version="3.3"; sha256="01fmyp3f26v5rdgi00qyn139fgq55yxz5nhx223hg78qwrrbjvpw"; depends=[geometry gtools rgl sp TDA XML]; }; archivist = derive2 { name="archivist"; version="2.3.4"; sha256="1i11hrcq1910jgd6diw6h3sxx624v57zjianm49pqvb2dvd0b8y7"; depends=[DBI digest flock httr lubridate magrittr RCurl RSQLite]; }; archivist_github = derive2 { name="archivist.github"; version="0.2.6"; sha256="092fzi505vx9xbk41m86d0isxna42iflp7q2kjiqa6z1ccvim2yx"; depends=[archivist digest git2r httr jsonlite]; }; - arcos = derive2 { name="arcos"; version="0.8.2"; sha256="055sr3brad4p47d018s14zsxlqyzfcvk7zdkqfdi9bxqway8vm7q"; depends=[dplyr jsonlite magrittr stringr urltools vroom]; }; + arcos = derive2 { name="arcos"; version="1.0"; sha256="1ifxj2f4zk8yk5f083fv0ziql4ywrg9iwyz09j9gsqs2bqvrmmlp"; depends=[dplyr jsonlite magrittr stringr urltools vroom]; }; areal = derive2 { name="areal"; version="0.1.5"; sha256="01fh4al7hz9hxnvkp4my8937czhr8jnxyvpnj4gmhsm4alv25yfc"; depends=[dplyr glue purrr rlang sf]; }; areaplot = derive2 { name="areaplot"; version="1.2-1"; sha256="1bmr092pgflgyss50xy1hs5xjl57i2wmfg7qa513sh120fi2mina"; depends=[]; }; arena2r = derive2 { name="arena2r"; version="1.0.0"; sha256="14zjpglp389pldi436935fz6mgi4jdgfii1m035nsvihrms9gqkh"; depends=[dplyr ggplot2 magrittr purrr rlang shiny shinyBS shinydashboard shinyjs tidyr]; }; - arf3DS4 = derive2 { name="arf3DS4"; version="2.5-10"; sha256="12cbrk57c9m7fj1x7nfmcj1vp28wj0wymsjdz8ylxhm3jblbgmxc"; depends=[corpcor]; }; arfima = derive2 { name="arfima"; version="1.7-0"; sha256="0kj8qv6m2fcdw8x735n8fk9cynm0jxi5v9hif0f879sxk6qkxb9y"; depends=[ltsa]; }; - argo = derive2 { name="argo"; version="2.0.0"; sha256="0gy43p7wdja3q99db56b8dr3yx8ca0zjv4gc33xv61fypdimgqrd"; depends=[boot glmnet Matrix XML xtable xts zoo]; }; argon2 = derive2 { name="argon2"; version="0.2-0"; sha256="0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh"; depends=[]; }; argonDash = derive2 { name="argonDash"; version="0.2.0"; sha256="1wykr7y5375g1nb18ynybccxmd948xrr0gdwxxqsfjf782vlgd2d"; depends=[argonR htmltools shiny]; }; argonR = derive2 { name="argonR"; version="0.2.0"; sha256="15hlvansqnky9bnq4r7xza3hb1hzylmhz8117wxz9lxa1wiky2is"; depends=[htmltools rstudioapi]; }; argosfilter = derive2 { name="argosfilter"; version="0.63"; sha256="0rrc2f28hla0azw90a5gk3zj72vxhm1b6yy8ani7r78yyfhgm9ig"; depends=[]; }; argparse = derive2 { name="argparse"; version="2.0.1"; sha256="1as7h6z7kzgv0fqzpnp76qbm96b4jcd37azd58b7rz0l1n94764l"; depends=[findpython jsonlite R6]; }; argparser = derive2 { name="argparser"; version="0.6"; sha256="1pxiz9jlhlnpzqn1lz349r07i7glw708w202x6dlnxp112fg7k4x"; depends=[]; }; - ari = derive2 { name="ari"; version="0.3.3"; sha256="1gbbims0vqm3rnkrg064aa2h359hl4il4grdpy0va8hq3mrkvkrb"; depends=[hms progress purrr rmarkdown rvest text2speech tuneR webshot xml2]; }; + ari = derive2 { name="ari"; version="0.3.5"; sha256="03w99c918jp23d0kl26vx4m7xjicpgwl5rhn9d0fsm4kvv7j87li"; depends=[hms progress purrr rmarkdown rvest text2speech tuneR webshot xml2]; }; aricode = derive2 { name="aricode"; version="0.1.2"; sha256="0w5ap0lhp9x67qvz3z80y49311g6h24x11yn8ziv75s3kaxy2wvz"; depends=[Matrix Rcpp]; }; arkdb = derive2 { name="arkdb"; version="0.0.5"; sha256="00ih2in6q0kismpc5jc8w3609nxjkmybx8i19cjlbr93y2zjm29i"; depends=[DBI progress]; }; - arkhe = derive2 { name="arkhe"; version="0.2.0"; sha256="0qw5n73vzzkqlb7c1n4f38v3vlmc2cqwq59j4zqvs9h5ipbf15bm"; depends=[]; }; + arkhe = derive2 { name="arkhe"; version="0.2.1"; sha256="0x0rj3r10l2n1n932643gdp36wic0jwlribqhy5awacwm5mgdfzc"; depends=[]; }; arm = derive2 { name="arm"; version="1.10-1"; sha256="0vvp90jygajd6ydky57z66wqjq9msfbl88irj5jbsray574mh4bg"; depends=[abind coda lme4 MASS Matrix nlme]; }; armada = derive2 { name="armada"; version="0.1.0"; sha256="191iwf5y1za3wssawkyi9jcingfqqxcvv88hglpw6j7y3x5f47hf"; depends=[anapuce circlize ClustOfVar ComplexHeatmap doParallel FAMT glmnet impute mvtnorm qvalue VSURF]; }; armspp = derive2 { name="armspp"; version="0.0.2"; sha256="098c59hdzr4ly8sx72xkcbjmiz5y65id1slsscwjji1yssb23lqq"; depends=[Rcpp]; }; @@ -5154,30 +5151,31 @@ in with self; { aroma_affymetrix = derive2 { name="aroma.affymetrix"; version="3.2.0"; sha256="19xh67ncr8cs8i9k803qsnx7jhwj2b72ls7nznf3dn3frw9wyyfj"; depends=[aroma_apd aroma_core future listenv MASS matrixStats R_cache R_devices R_filesets R_methodsS3 R_oo R_utils]; }; aroma_apd = derive2 { name="aroma.apd"; version="0.6.0"; sha256="1l9p5qww71h6wlg2z15wirsfz2i7hmf637l17zaf3n7fp9s3flc7"; depends=[R_huge R_methodsS3 R_oo R_utils]; }; aroma_cn = derive2 { name="aroma.cn"; version="1.6.1"; sha256="1d9g81b12a3m03wrvb3cvg33fjybgiabpxhci2y2rr6diay42pmr"; depends=[aroma_core matrixStats PSCBS R_cache R_filesets R_methodsS3 R_oo R_utils]; }; - aroma_core = derive2 { name="aroma.core"; version="3.2.0"; sha256="1c4spy2sc80clz49irzilsqy65k6q2vl86qaydnymkzljcz7bbpg"; depends=[future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; + aroma_core = derive2 { name="aroma.core"; version="3.2.1"; sha256="1nc88h7khjabgzyj4nvjkx9dzmic6bhhfskf024yq3rf1d55v09g"; depends=[BiocManager future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; arpr = derive2 { name="arpr"; version="0.1.1"; sha256="0j69nbmhmhmyfna011gv68wvxv1x2lijz94pyg9g2ax720x74i2q"; depends=[magrittr]; }; arrApply = derive2 { name="arrApply"; version="2.1"; sha256="0qy7iwi580rrf3sycsbv6qgxsqcdy9pdbnkdrx81j68qni9iw737"; depends=[Rcpp RcppArmadillo]; }; arrangements = derive2 { name="arrangements"; version="1.1.8"; sha256="03dzvahy8mwp6w1smnbp83zk8w8pfkmsfd1f68bd8jjvdb5lrz71"; depends=[gmp R6]; }; - arrayhelpers = derive2 { name="arrayhelpers"; version="1.0-20160527"; sha256="1ib91hpg6xgy0jr4sb8ib19x0v4f5n96lak0qm0z5vksawgcnp1l"; depends=[svUnit]; }; - arrow = derive2 { name="arrow"; version="0.15.1.1"; sha256="0qdzq22x3cqfwa9a62rl718kbmq87rk3s0k17hsh5122sb8lwvh1"; depends=[assertthat bit64 purrr R6 Rcpp rlang tidyselect]; }; + arrayhelpers = derive2 { name="arrayhelpers"; version="1.1-0"; sha256="02rl530qxi1idiqpmzg5wr9vl5c7phizhpj64k5pn8xq9zfxbpaz"; depends=[svUnit]; }; + arrow = derive2 { name="arrow"; version="0.16.0.2"; sha256="1h7c46qraz15dra38hfs6avv27j4d5x4s4cs10vnwyqik11gb2mv"; depends=[assertthat bit64 purrr R6 Rcpp rlang tidyselect vctrs]; }; ars = derive2 { name="ars"; version="0.6"; sha256="0zs1rk3i7pc9wcvxrvjcls194mfbvmkz7cb6pwd1cm3fzjwsyxsp"; depends=[]; }; arse = derive2 { name="arse"; version="1.0.0"; sha256="0ssaalc058m09gfcr1n0s729rx2plia3zkhlynj67drclyvhyb0i"; depends=[dplyr pracma]; }; - arsenal = derive2 { name="arsenal"; version="3.3.0"; sha256="1bn1i5cdy6caw6ndqcfy41x3qb0hj3g4r8p4jl24gljygd3rvzgh"; depends=[]; }; + arsenal = derive2 { name="arsenal"; version="3.4.0"; sha256="090q0kjpcjdxa6r22pb7wzhvgcdq41khh1af7pqgg1rvn2d97x4n"; depends=[knitr]; }; artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; }; arules = derive2 { name="arules"; version="1.6-4"; sha256="003c5cd3xzq39h7c19px077ygm0n1v7k83icy5zzrnkagyds2p8n"; depends=[Matrix]; }; arulesCBA = derive2 { name="arulesCBA"; version="1.1.6"; sha256="1b82am0sv5211x65r45k7pw52hfywv5i8zqr5asczdkx07s6273s"; depends=[arules discretization glmnet Matrix testthat]; }; arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-5"; sha256="1q4sx6c9637kc927d0ylmrh29cmn4mv5jxxpl09yaclzfihjlk9a"; depends=[arules rJava]; }; - arulesSequences = derive2 { name="arulesSequences"; version="0.2-22"; sha256="0m4g1mgc1swixq9z2v30bjvgnkqsjrinsmwqznrycxyzcgwbn8b3"; depends=[arules]; }; + arulesSequences = derive2 { name="arulesSequences"; version="0.2-24"; sha256="0sgysrvmdsr6l0661llrmsnnn397n2niv0bhlm0i31ak0fwh1ljz"; depends=[arules]; }; arulesViz = derive2 { name="arulesViz"; version="1.3-3"; sha256="1c51l4hqai07qx20lbdvffxw9kx0vkgbccw7b9wz1h2n5ma90c8y"; depends=[arules colorspace DT igraph plotly scatterplot3d seriation vcd visNetwork]; }; asVPC = derive2 { name="asVPC"; version="1.0.2"; sha256="07nfwr0lsfpwgfdgzcdn1svw8dnjfni5ga9q77yjd1bj0wf76ci2"; depends=[ggplot2 plyr]; }; asaur = derive2 { name="asaur"; version="0.50"; sha256="0c1rgic76w3i2xhna7i52lyc0p01s5b1mxyn55gqw6i19v9mq0b3"; depends=[]; }; - asbio = derive2 { name="asbio"; version="1.6-1"; sha256="0fhn0c743ndirqc9sbjq819xbrhjky2adk7nrjh2khjfbfrf0fw6"; depends=[deSolve gWidgets lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; + asbio = derive2 { name="asbio"; version="1.6-3"; sha256="15b3018wyf41iajy92a0nzhhz0qfawi05zy5my1hq3l5mrlkidh1"; depends=[deSolve gWidgets gWidgetstcltk lattice multcompView mvtnorm pixmap plotrix scatterplot3d tkrplot]; }; asciiSetupReader = derive2 { name="asciiSetupReader"; version="2.3.0"; sha256="1gfd1pqanxc3wsl1pmqc9csbzlffryvjkd1p2fa7b0kbwl1ln63s"; depends=[data_table haven miniUI readr rstudioapi shiny stringr vroom zoo]; }; asciicast = derive2 { name="asciicast"; version="1.0.0"; sha256="0vga88cq2hzi0bwq43n1yz5cm8kaag9xpg8v73gj06fb93lhha9x"; depends=[curl jsonlite processx tibble uuid V8]; }; asciiruler = derive2 { name="asciiruler"; version="0.2"; sha256="0xhkbsy9dypk09avazgxczyfkh3rhdxhwci688dw1lxnhxv1hj24"; depends=[stringr]; }; asd = derive2 { name="asd"; version="2.2"; sha256="0p3r4qjam3sl3rpcilb0pgx4xx3ly71xqnvkv31vzjs885lgxz4l"; depends=[mvtnorm]; }; asdreader = derive2 { name="asdreader"; version="0.1-3"; sha256="15a922aw0v5w4hrha03xifx8cpifcc773gambgwqq6i5nz08ya26"; depends=[]; }; ash = derive2 { name="ash"; version="1.0-15"; sha256="1ay2a2agdmiz7zzvn26mli0x0iwk09g5pp4yy1r23knhkp1pn2lb"; depends=[]; }; + ashr = derive2 { name="ashr"; version="2.2-47"; sha256="1rqb5j30ylaf1h4l66x4jxyn5inrvhc42d90qd5mgkxsq0ghdlr4"; depends=[etrunct invgamma Matrix mixsqp Rcpp SQUAREM truncnorm]; }; asht = derive2 { name="asht"; version="0.9.4"; sha256="1aq384vgf26ig3isyp99z09glcjhl2qd43kp8qdcwk75dcrmxd7z"; depends=[bpcp coin exact2x2 exactci perm ssanv]; }; askpass = derive2 { name="askpass"; version="1.1"; sha256="07q0ik8jzk44vpwh48rr3fnpd7dzsdhjjsl4l850rffv3dyq4h6v"; depends=[sys]; }; aslib = derive2 { name="aslib"; version="0.1"; sha256="0dkb6bb6dqavjklbciqxqhi3fdqib9asdnhiap2gp9b9wfnkyq7k"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; }; @@ -5185,7 +5183,7 @@ in with self; { aspace = derive2 { name="aspace"; version="3.2"; sha256="1g51mrzb6amafky2kg2mx63g6n327f505ndhna6s488xlsr1sl49"; depends=[Hmisc shapefiles splancs]; }; aspect = derive2 { name="aspect"; version="1.0-5"; sha256="0pbc0daxw20xcbgqyyd5gbs9kmbaf2dq8ajllx0mnfwdcak9jfgj"; depends=[]; }; aspi = derive2 { name="aspi"; version="0.2.0"; sha256="0rhvxw243vvdv3hxa6pi343gcjc2cbxq1jzqirl9k1l4i3897l87"; depends=[]; }; - asremlPlus = derive2 { name="asremlPlus"; version="4.1-36"; sha256="1qh6k1vf3a01dzllapjwrz7qw7bl2pxbbwij20pwhb4v8njpy1y7"; depends=[dae doParallel dplyr foreach ggplot2 plyr RColorBrewer reshape stringr]; }; + asremlPlus = derive2 { name="asremlPlus"; version="4.2-18"; sha256="1v83ahb7rndybfzaw6gnv0m4fvp8nv8gsrsasa8x59n6pd5jkjd9"; depends=[dae doParallel dplyr foreach ggplot2 plyr RColorBrewer reshape stringr]; }; assertable = derive2 { name="assertable"; version="0.2.7"; sha256="1npks9rcrnchmd0silq6qrvqkmdkp9fwjkyyvvp1lqjclyxk6vkk"; depends=[data_table]; }; assertive = derive2 { name="assertive"; version="0.3-5"; sha256="0blbbhlxcb5ffdxqxi62xs33ljiawh6s22a0pyvbbh79jf46rzr3"; depends=[assertive_base assertive_code assertive_data assertive_data_uk assertive_data_us assertive_datetimes assertive_files assertive_matrices assertive_models assertive_numbers assertive_properties assertive_reflection assertive_sets assertive_strings assertive_types knitr]; }; assertive_base = derive2 { name="assertive.base"; version="0.0-7"; sha256="1xs3ysvj0z57c58jw57pckq2rynia6ks4rmjmc02alczhk54wbgh"; depends=[]; }; @@ -5203,9 +5201,9 @@ in with self; { assertive_sets = derive2 { name="assertive.sets"; version="0.0-3"; sha256="1cqvh2syvh5b6d85h601zjmsdbbf3h8q98ids4dfl4frdshpasc7"; depends=[assertive_base]; }; assertive_strings = derive2 { name="assertive.strings"; version="0.0-3"; sha256="0n6jrk88670g4ym0r8ii40a08a90z1xadj8wcryk8h0nl04dchfm"; depends=[assertive_base assertive_types stringi]; }; assertive_types = derive2 { name="assertive.types"; version="0.0-3"; sha256="0zxq1jfrzgw95ll7alvm0xnk7aihjdksngq4ya2whyvfjbmv4vdb"; depends=[assertive_base assertive_properties codetools]; }; - assertr = derive2 { name="assertr"; version="2.6"; sha256="0g4ii6vhp0155a29ljhs64a09x0nzy5ybvwwchhk4mkcgsvnvfkj"; depends=[dplyr MASS rlang]; }; + assertr = derive2 { name="assertr"; version="2.7"; sha256="1x868pd4dac1c7b1q5390wqh2f6s50km8nqcpim3nxcj2l4qkqdb"; depends=[dplyr MASS rlang]; }; assertthat = derive2 { name="assertthat"; version="0.2.1"; sha256="17wy5bdfzg73sg2clisg1k3zyn1adkj59x56m5nwia2k8z67zkw5"; depends=[]; }; - assignPOP = derive2 { name="assignPOP"; version="1.1.7"; sha256="0zx7cblfzfpi5jvagni56845lg198zkx5q43ip3lg8h0sq2h8qp2"; depends=[caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree]; }; + assignPOP = derive2 { name="assignPOP"; version="1.1.9"; sha256="1cbk2l827mfi4fi1jai0lzbcj2wvrzd3kw4frmqn4anx6nbcr0qf"; depends=[caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree]; }; assignR = derive2 { name="assignR"; version="1.1.3"; sha256="0pmzgz955nqxlcnb0f0kbv415kysjl12niyh704ksvhs5yw0xhah"; depends=[maptools raster rgdal sp]; }; assist = derive2 { name="assist"; version="3.1.6"; sha256="13r029z32f2xcspafx01jkgmabbjcvnp8wg1wx1liwxh3mf2zalg"; depends=[lattice nlme]; }; assocInd = derive2 { name="assocInd"; version="1.0.1"; sha256="16yzgvlqbapjhvzm5nw8vfrhh8mp9llnhck4bpgmszyrh93z1ha5"; depends=[]; }; @@ -5223,22 +5221,22 @@ in with self; { asympTest = derive2 { name="asympTest"; version="0.1.4"; sha256="02l07psiy1888zx86j2r1l5lznz47wdmzbh39pd2nbj8r9i80szr"; depends=[]; }; asypow = derive2 { name="asypow"; version="2015.6.25"; sha256="0il38djkmw5ka7czpalmhq6yycx7flpdpgbd7p5nx52rsjdv49mj"; depends=[]; }; atable = derive2 { name="atable"; version="0.1.5"; sha256="0jvlch6yhcz5azxj9yllah0x98plws5camxqis58qyqiapgvl9h8"; depends=[DescTools doBy effsize Hmisc plyr reshape2 settings]; }; - atakrig = derive2 { name="atakrig"; version="0.9.5"; sha256="0lw4mx029aks0w1lhxv58v9r4c01rrayq79bapdbd8lf8ivpcp3n"; depends=[doSNOW FNN foreach gstat MASS Rcpp rgeos snow sp]; }; + atakrig = derive2 { name="atakrig"; version="0.9.6-2"; sha256="066rq0radavv2c5lss2f0nhhrr5592ck7lazj42rrzdz8dmbm710"; depends=[doSNOW FNN foreach gstat MASS Rcpp rgeos snow sp]; }; atlas = derive2 { name="atlas"; version="1.0.0"; sha256="02wm22j40llmdi6z3rzgbc5fpkzmjfq0xar33bypvj1dx1zxygnd"; depends=[httr testthat]; }; atmcmc = derive2 { name="atmcmc"; version="1.0"; sha256="05k69b5wlysz3kh0yiqvshgvr0nyz34zkvn6bjs30cwz7s9j21pn"; depends=[]; }; atmopt = derive2 { name="atmopt"; version="0.1.0"; sha256="1h79ngq1236gz4w29fs3nj46a3m1x8a28z3xnhc6wn3a46cf8zzi"; depends=[DoE_base gtools hierNet]; }; atsd = derive2 { name="atsd"; version="1.2.0"; sha256="0jan8r5f2r3l2xpdf9rrv4smkr2l645rfdgdfjb1xa54jd3pqvqs"; depends=[httr RCurl]; }; - attachment = derive2 { name="attachment"; version="0.0.9"; sha256="0z47v5nqvw0grgll2bl66zy82igg1ncy78jm9dwv45yd4dl2xi10"; depends=[desc devtools glue knitr magrittr rmarkdown stringr]; }; + attachment = derive2 { name="attachment"; version="0.1.0"; sha256="0j3zm0ibf1iv67jy4mq1fzckgbxhxyx74frplsl2np0fbdgsxdz6"; depends=[desc glue knitr magrittr rmarkdown roxygen2 stringr]; }; attempt = derive2 { name="attempt"; version="0.3.0"; sha256="1q0r4r0hirw2kxsvcq5rqkmbxzi7fa6fxaqi6rmzwiz25025iv71"; depends=[rlang]; }; attenuation = derive2 { name="attenuation"; version="1.0.0"; sha256="0ys4psvkvimmym4qj9cmhq8y7x10kv0x6bsvpjkrsc3l8p2g3474"; depends=[]; }; atus = derive2 { name="atus"; version="0.2"; sha256="1i67rx8p5v4shgbfcym4lbnlw55xx7w2fdzhgsgjjyfpwbpm7h4h"; depends=[]; }; auRoc = derive2 { name="auRoc"; version="0.2-0"; sha256="1q5cpa1y96bs5x0vifi0h6ca4yasg3z57yhq29vicd433h3phy3x"; depends=[coda MBESS ProbYX rjags]; }; aucm = derive2 { name="aucm"; version="2019.12-1"; sha256="1vjb5jiq2iz6c8nhfcbqg21nms7nf485xlrgd7mdkbzvqxxl43h6"; depends=[kyotil]; }; auctestr = derive2 { name="auctestr"; version="1.0.0"; sha256="15b1x0c9yhl91gir7jmivp8vxzc8q7wvb0mgam9454avc6l29x4y"; depends=[dplyr tidyr]; }; - audio = derive2 { name="audio"; version="0.1-6"; sha256="1f3k7n8x716kqx439jd0g0dc5iwc33jzzas4ikjrlgidp89i89iz"; depends=[]; }; + audio = derive2 { name="audio"; version="0.1-7"; sha256="0x4wcl8nlymmzhsdd255ybxdwnshksmr92y6drcajnij8mx3kq2j"; depends=[]; }; audiolyzR = derive2 { name="audiolyzR"; version="0.4-9"; sha256="09jsrjy15vcn6da0kgk06ghayyrf3s853gqv8qdawg745ky2hbgi"; depends=[hexbin plotrix RJSONIO]; }; audit = derive2 { name="audit"; version="0.1-1"; sha256="0hrcdcwda5c0snskrychiyfjcbnymkcl2x43bapb6inw9y8989qv"; depends=[]; }; - auditor = derive2 { name="auditor"; version="1.1.0"; sha256="10f9vk92w35rd56jsp81a31fm7ys28f9acnp2qr1n28c14m4pbvz"; depends=[DALEX ggplot2 ggrepel gridExtra hnp scales]; }; + auditor = derive2 { name="auditor"; version="1.2.0"; sha256="14swypvjfkd8qi34dsv2sg2fj0ls4xz42vy4csd2qxj0zwi3rlap"; depends=[DALEX ggplot2 ggrepel gridExtra hnp scales]; }; augSIMEX = derive2 { name="augSIMEX"; version="3.7.3"; sha256="0cdqpckc4aiwi2dnkcvk2m9n0bg9f7qmd84n3rdw6clcrd0f95wz"; depends=[Formula MASS nleqslv Rcpp rootSolve]; }; augmentedRCBD = derive2 { name="augmentedRCBD"; version="0.1.1"; sha256="0l2x8f8xqrvsn4gbi707xw2nfxcvcmxwgpzq4vh8ngxnq89m2179"; depends=[dplyr emmeans flextable ggplot2 moments multcomp multcompView officer Rdpack reshape2 stringi]; }; auk = derive2 { name="auk"; version="0.4.0"; sha256="1wrplqbzfa0jp91hxc1jd5vjm587pz1768s7csfqvrgn8ziy9akx"; depends=[assertthat countrycode dplyr httr magrittr rlang stringi stringr tidyr]; }; @@ -5250,38 +5248,42 @@ in with self; { autocogs = derive2 { name="autocogs"; version="0.1.2"; sha256="11sjj6945099w499r6sgxx2vrz0aqx4bjjh6vklyfkjm6xvh4ckj"; depends=[broom checkmate diptest dplyr ggplot2 hexbin MASS mclust moments progress tibble]; }; autoencoder = derive2 { name="autoencoder"; version="1.1"; sha256="0ly1aanayk28nx6yqfhl7d0zm4vg6rfjikf5ibn8zhmkrfyflj1y"; depends=[]; }; autoimage = derive2 { name="autoimage"; version="2.0.1"; sha256="1mwkrnyk7ygjmqbhpz86kzzmgk57q3kppp13m6rv2a65macbby2z"; depends=[fields ggplot2 mapproj maps MBA viridisLite]; }; + autokeras = derive2 { name="autokeras"; version="1.0.1"; sha256="171q7i1zygzmkm34bi7grx5rvnjwks60ifk4k86kki5aiipzx4d5"; depends=[keras reticulate]; }; automagic = derive2 { name="automagic"; version="0.5.1"; sha256="1mmm6kj6mxrn3s4v8ryszkxr9z7bh9cvhin7xjq111fkwly7wjkq"; depends=[dplyr formatR knitr magrittr purrr remotes yaml]; }; automap = derive2 { name="automap"; version="1.0-14"; sha256="1190kbmp0x80x0hyifdbblb4ijq79kvrfn9rkp5k6diig4v30n0w"; depends=[gstat lattice reshape sp]; }; automl = derive2 { name="automl"; version="1.3.2"; sha256="1nrg8q3y6rv69nmnsylg8rps4b4prx46j5a8ljlr24yc34504ck3"; depends=[]; }; automultinomial = derive2 { name="automultinomial"; version="2.0.0"; sha256="04rjg3xjlhnkchzvdxqm762z5abm81s5b9czgzmli30zh07bf3fd"; depends=[igraph Matrix numDeriv]; }; autoplotly = derive2 { name="autoplotly"; version="0.1.2"; sha256="0ajzzj9w9f0v9n37liml63hq5xwkqq53lw85p0a2h99n4lg2hdg8"; depends=[ggfortify ggplot2 plotly]; }; - autopls = derive2 { name="autopls"; version="1.3"; sha256="1qf5gk1vsz1p5670w7bgzh3b15wvrx1gy6ih4sivw0vj8bcjxbw9"; depends=[pls]; }; autoshiny = derive2 { name="autoshiny"; version="0.0.2"; sha256="0s06ynnirgsh19x8qq4020piirkhvjqpvz372syygvlal062y6cn"; depends=[shiny]; }; autothresholdr = derive2 { name="autothresholdr"; version="1.3.5"; sha256="1dvc21w57ir34vhcrbz58scl4ly057yn1ibmdkly99hwfkpihv3x"; depends=[checkmate filesstrings glue ijtiff magrittr purrr Rcpp rlang]; }; - av = derive2 { name="av"; version="0.4.0"; sha256="0r9z3iahrjlwpvcc29450c669576yprchg1znivq7p9lzff83plc"; depends=[]; }; + av = derive2 { name="av"; version="0.5.0"; sha256="0v99y47dsa2z3c4qawipdrzynla2aab3x0c8qzdi5w9r5y9a38sh"; depends=[]; }; available = derive2 { name="available"; version="1.0.4"; sha256="18dqm10dicbvjd5wli4nkv4fip0fgh2b9h9gm5511ayfsdg8lc8l"; depends=[cli clisymbols crayon desc glue jsonlite memoise SnowballC stringdist tibble tidytext udapi yesno]; }; avar = derive2 { name="avar"; version="0.1.1"; sha256="1i0bk3y0ca58ihwn4di8rpkp5vs2j5b80rcvaf72n9h2hp8i2ncz"; depends=[Rcpp RcppArmadillo simts]; }; averisk = derive2 { name="averisk"; version="1.0.3"; sha256="02j27d4jxgy2bk5sgxp1xdfyqr321civs99qj0g8cp34gwqk0j3m"; depends=[MASS]; }; aweek = derive2 { name="aweek"; version="1.0.0"; sha256="0a9d4yp694qch34mf08qc5fwsn21h9mw1ak6vylaq73nwiihajw9"; depends=[]; }; - aws = derive2 { name="aws"; version="2.4-0"; sha256="1jwa2n8n4ngznd8na89gnab97m94sz4bsmd3fld5h4pppilac80h"; depends=[awsMethods gsl]; }; + aws = derive2 { name="aws"; version="2.4-1"; sha256="00mc1qwah6i4ajmm01sklz86vz9rwchdsdrck5yrva2a2b1war22"; depends=[awsMethods gsl]; }; aws_alexa = derive2 { name="aws.alexa"; version="0.1.7"; sha256="0k3kwkmi13j2nrkyi6ahpc98s24idx4m5s4wkqkgqhi8xaljpp7c"; depends=[aws_signature dplyr httr xml2]; }; + aws_comprehend = derive2 { name="aws.comprehend"; version="0.2.1"; sha256="0qn4mkdd17c8kmrm4ml7l1x3rzaw3gbykhrj3m0ga53crcqdhqri"; depends=[aws_signature httr jsonlite]; }; aws_ec2metadata = derive2 { name="aws.ec2metadata"; version="0.2.0"; sha256="1lbljg2fp3yh1hwlbmprkc1prw80jv0ycvpg1vggagm68wm5x288"; depends=[curl jsonlite]; }; - aws_polly = derive2 { name="aws.polly"; version="0.1.2.1"; sha256="10wr30a52m0nq3a6bqqvfzic86g5sq485zy5xfgay2y5ivsdz6k8"; depends=[aws_signature httr jsonlite tuneR]; }; - aws_s3 = derive2 { name="aws.s3"; version="0.3.12.1"; sha256="1nwj5yqgqpc475cia39x5277w9jalm6lmsa4j3spcr254qdkjl7q"; depends=[aws_signature base64enc digest httr xml2]; }; + aws_polly = derive2 { name="aws.polly"; version="0.1.5"; sha256="1xfx9g5iq1wcl27cmj4ss3y3f5yr1qmma77ki09g3ji2xvd50101"; depends=[aws_signature httr jsonlite tuneR]; }; + aws_s3 = derive2 { name="aws.s3"; version="0.3.20"; sha256="02n4h5y792q9xr5mcv7lylv3p6nqbi754hj63c0vslx759p0yvbc"; depends=[aws_signature base64enc curl digest httr xml2]; }; aws_signature = derive2 { name="aws.signature"; version="0.5.2"; sha256="0skibgf2l6n7ql51gnlmvjyfmaqa8ijc9gywmyhvrcj9bix2pydf"; depends=[base64enc digest]; }; + aws_transcribe = derive2 { name="aws.transcribe"; version="0.1.3"; sha256="1nni1b935i2ir67lfhcj0106vzr310mk2jvln32gvzbnqxcggz7m"; depends=[aws_signature httr jsonlite]; }; + aws_translate = derive2 { name="aws.translate"; version="0.1.4"; sha256="1x6cvpfddgwywsji4ywygmqn3pwy3i1aci9lk4nsrrfkzggwcbpb"; depends=[aws_signature httr jsonlite]; }; awsMethods = derive2 { name="awsMethods"; version="1.1-1"; sha256="0hbmrcpdyg15zg4rysscsmxpxlpy0dkxx2aa63qibq7l1k14v4sh"; depends=[]; }; awsjavasdk = derive2 { name="awsjavasdk"; version="0.2.0"; sha256="1461h565il4y68g0a3k7wgn9jyb6pys8405f780ldg6g44aa7p60"; depends=[assertthat R_utils rappdirs rJava]; }; - azuremlsdk = derive2 { name="azuremlsdk"; version="0.5.7"; sha256="1r9s1avkr03hradzr66lz7xxz4s6ax8d6amxkhcnphyaykss8gh1"; depends=[DT ggplot2 htmltools plyr reticulate rstudioapi]; }; + azuremlsdk = derive2 { name="azuremlsdk"; version="0.6.85"; sha256="16w4gispm3sk48zaw1mi0qxg3qgkpy995p6rak7liqkndqfpzh7s"; depends=[DT ggplot2 htmltools plyr reticulate rstudioapi servr shiny shinycssloaders]; }; b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; }; bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; }; bReeze = derive2 { name="bReeze"; version="0.4-3"; sha256="17nc6qvw9l6sq8knd1mk193md2y3z1jlcjymqzl389yxj8s0i2il"; depends=[lubridate]; }; bSims = derive2 { name="bSims"; version="0.2-1"; sha256="024k9s42a9w5pmw024b15sj5ilcfpkm7lv59yimjicr9lmw246kb"; depends=[deldir intrval MASS mefa4 pbapply]; }; bWGR = derive2 { name="bWGR"; version="1.6.6"; sha256="1m5spafvl5pn0s60vaf8wz7iaibsa7laq7kp8y9xj20pp3f76hvr"; depends=[Rcpp]; }; - baRcodeR = derive2 { name="baRcodeR"; version="0.1.4"; sha256="17vf4rrw6p2b7ynxgldc7f24i8ml7h486ip2mv60gj4kz1cjzx0y"; depends=[DT miniUI qrcode rstudioapi shiny]; }; + baRcodeR = derive2 { name="baRcodeR"; version="0.1.5"; sha256="1fdywv7mvxx3q8pildsfllmw814f2p71xcwvfmplngv2vgrpzz9w"; depends=[DT miniUI qrcode rstudioapi shiny]; }; + baRulho = derive2 { name="baRulho"; version="1.0.1"; sha256="0wclqjh7pwb0hrhj04mrcchdxvi4ma56gxphgi3x04gx6n04pczg"; depends=[pbapply seewave tuneR warbleR]; }; babar = derive2 { name="babar"; version="1.0"; sha256="13j5klrcnd4dwrgdbxlvwcj56l9mzi4j9ga6jj5i04pgdc6vsfx5"; depends=[]; }; babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; }; babelwhale = derive2 { name="babelwhale"; version="1.0.1"; sha256="0mgkg9hji4mab3l33vvyyyc1d2q84l1zrmg63vr3b3gr0d62jcnl"; depends=[crayon dplyr dynutils processx purrr]; }; - babette = derive2 { name="babette"; version="2.1.1"; sha256="1zfc1xlaqrwbg0q9bzxbc7s1jqy2cnip1dmw9qgacxnjwxmz8hj2"; depends=[beastier beautier mauricer phangorn remotes stringr testit tracerer xml2]; }; + babette = derive2 { name="babette"; version="2.1.2"; sha256="06985zzibckrjqxfvbdxg88yv3jssbaaildjdp68zb8qk5bsds12"; depends=[beastier beautier mauricer phangorn remotes stringr testit tracerer xml2]; }; babynames = derive2 { name="babynames"; version="1.0.0"; sha256="1vchzyk5pkr0zhh1q8k9g771n45jxiislipwkgrgamv7yzr49xsp"; depends=[tibble]; }; bacistool = derive2 { name="bacistool"; version="0.9.9"; sha256="06734pi829xhfkpdhysa62x1sc0shhbdn6l9vls2cyfr30w6y6md"; depends=[rjags]; }; backShift = derive2 { name="backShift"; version="0.1.4.2"; sha256="1nj7mcdpzfzq68qg86rrys752gzw69n99yyb0jzg6r8qrgpcxj49"; depends=[clue ggplot2 igraph MASS matrixcalc mvnmle reshape2]; }; @@ -5295,8 +5297,8 @@ in with self; { badger = derive2 { name="badger"; version="0.0.7"; sha256="1djgzn6ixfsdr0v4f3714mv2z2kl776dd2hq670g7bla4lp6344s"; depends=[desc dlstats rvcheck]; }; bagRboostR = derive2 { name="bagRboostR"; version="0.0.2"; sha256="1k9w98p3ad3myzyqhcrc4rsn7196qvhnmk5ddx3fpd1rdvy2dnby"; depends=[randomForest]; }; baggedcv = derive2 { name="baggedcv"; version="1.0"; sha256="1rqs4sm6g1anck5s2dxlm1vcmylpphcbs2dpvf1sjki5lrzdq9z4"; depends=[doParallel foreach kedd mclust]; }; - baggr = derive2 { name="baggr"; version="0.3.0"; sha256="084w2a5y0d060hihl5n88ai4pbg312g6y5lapy4kb2qcjd7i9zg1"; depends=[bayesplot BH crayon forestplot ggplot2 gridExtra Rcpp RcppEigen rstan rstantools StanHeaders testthat]; }; - bain = derive2 { name="bain"; version="0.2.3"; sha256="0n5z9sdvjbx1xagxyvyiqdwyxrlkfd2vjnrzhlshamr4xh0csa48"; depends=[lavaan]; }; + baggr = derive2 { name="baggr"; version="0.4.0"; sha256="1cbajifb4gavamj46zs9vk6ihhg6wnv2hn75452bdc2mc4ingn5n"; depends=[bayesplot BH crayon forestplot ggplot2 gridExtra Rcpp RcppEigen rstan rstantools StanHeaders testthat]; }; + bain = derive2 { name="bain"; version="0.2.4"; sha256="15car9j11s0ywss13g5swf1dxjjc91xmbkvx200mivca9bj6245m"; depends=[lavaan]; }; bairt = derive2 { name="bairt"; version="0.1.2"; sha256="17nc0lp0bzwshik33v0gq5d6nd2gvm4799b7rfiq089zhnzv90kj"; depends=[coda mvtnorm shiny shinyjs]; }; baitmet = derive2 { name="baitmet"; version="1.0.1"; sha256="02ydakqr8v41hdnhcsgigwnic8d48qswryg1srb5w1fqdmdglnkl"; depends=[erah HiClimR Rcpp signal XML]; }; balance = derive2 { name="balance"; version="0.2.4"; sha256="13ksd1ysd2by8qdc3vn1fgnaj1c2v0py7f501bajiyq6hpcwn1c5"; depends=[ggplot2]; }; @@ -5304,18 +5306,19 @@ in with self; { bama = derive2 { name="bama"; version="0.9.1"; sha256="1yx0gv5qxq3si5vzrrjy8y6d3b0v433aljyniyx9dp6q6mcqrhvw"; depends=[Rcpp RcppArmadillo]; }; bamboo = derive2 { name="bamboo"; version="0.9.24"; sha256="1fw1wniba0kxb44d2w9r9nh5sy1jhrk48bn0zblz2y6gvwn8m2vn"; depends=[rscala]; }; bamdit = derive2 { name="bamdit"; version="3.3.2"; sha256="11v9hy8ijbcqhwim0s3y69dz11jvys4vjvfnshj4p5qdz38sji6l"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; - bamlss = derive2 { name="bamlss"; version="1.1-1"; sha256="06i0yfmq5k98yqs8mfw3ppkanlp34v18fb1xynxaxwgj9d58h5k3"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; + bamlss = derive2 { name="bamlss"; version="1.1-2"; sha256="0s0i2qpwcshfqxciwp5w7mxvw0a1x52y4yaspvf1gx9jms7bqn8b"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm raster sp survival]; }; bamp = derive2 { name="bamp"; version="2.0.8"; sha256="0p7vi9gqplqnrc0vl55m1xx160k5kdxs4sxqxyrg908yhsnr5vj6"; depends=[abind coda]; }; banR = derive2 { name="banR"; version="0.2.1"; sha256="0bqy8srxsd0r872scpij8lyrvb0n8jicwpvf9wh1xk1bjmlq3vb5"; depends=[dplyr httr magrittr purrr readr rlang tibble]; }; bandit = derive2 { name="bandit"; version="0.5.0"; sha256="03mv4vbn9g4mqikd9map33gmw2fl9xvb62p7gpxs1240w5r4w3fp"; depends=[boot gam]; }; - bang = derive2 { name="bang"; version="1.0.0"; sha256="16wy2imrdvhpdzi6ix9k69afqdyc44d1xr655yd3q1cl12x1nr04"; depends=[bayesplot rust]; }; + bang = derive2 { name="bang"; version="1.0.1"; sha256="0m7p9gzspkyp40ir842ff4b1827w9rh7x49kpp3y4dpi83krqy5a"; depends=[bayesplot rust]; }; bannerCommenter = derive2 { name="bannerCommenter"; version="0.1.1"; sha256="0ndm4z6gkd9flxsh1sx08c5ahm8297hzn8f5hc1mpn5m998ajjsj"; depends=[]; }; banter = derive2 { name="banter"; version="0.9.3"; sha256="1ziys0zy66477ynr8rp2kv7w82n6226whn47aa06kkb4nhcqfk2c"; depends=[dplyr ggplot2 gridExtra magrittr plyr randomForest ranger rfPermute rlang tibble tidyr]; }; banxicoR = derive2 { name="banxicoR"; version="0.9.0"; sha256="0vchm2hnqm45fhn8k38rcam4vkazmifcl40390s2r04bgvqr0pnl"; depends=[rvest stringr xml2]; }; bapred = derive2 { name="bapred"; version="1.0"; sha256="08kvc4cc984jv08ikwbja8zxidrcdiwi5w88hlqakbm8yc6hzssa"; depends=[affy affyPLM Biobase FNN fuzzyRankTests glmnet lme4 MASS mnormt sva]; }; barcode = derive2 { name="barcode"; version="1.1"; sha256="14zh714cwgq80zspvhw88cs5b82gvz4b6yfbshj9b7x0y2961nxd"; depends=[lattice]; }; barplot3d = derive2 { name="barplot3d"; version="1.0.1"; sha256="182kpiknv3id1bsgcc6b3ahbxmm8x3lxcpf1r6rckpr3s0whfx3g"; depends=[rgl]; }; - barsurf = derive2 { name="barsurf"; version="0.3.1"; sha256="07s43sy5200mwxasmcar4lsw7bm1112ck7z62rbyxnawg1zmrwq5"; depends=[colorspace]; }; + barsurf = derive2 { name="barsurf"; version="0.4.0"; sha256="1n8kwzawdgbazd4cshavlki1di5xfczgfpd7vv2rrb8cmwlsnw61"; depends=[colorspace kubik]; }; + bartBMA = derive2 { name="bartBMA"; version="1.0"; sha256="15syk5a3lgzfyp17wk8mk14317yxsr47br26kyah5jg3dq4cyqdg"; depends=[BH mvnfast Rcpp RcppArmadillo Rdpack]; }; bartMachine = derive2 { name="bartMachine"; version="1.2.4.2"; sha256="100zcpbndbps01qnybrgmsfnh37j93661l4v7zcin0i56cvgg998"; depends=[bartMachineJARs car missForest randomForest rJava]; }; bartMachineJARs = derive2 { name="bartMachineJARs"; version="1.1"; sha256="1wpfzrb6mrx3xmxy4rgnwygmpqq2l4ki2xqr4m51g1bl9nwirhzj"; depends=[rJava]; }; basad = derive2 { name="basad"; version="0.2.0"; sha256="1qc2amkrjrgdqys275p82lmbpjszm5rzjdpri7hqc9d8b8q1vc9q"; depends=[Rcpp RcppEigen rmutil]; }; @@ -5324,15 +5327,15 @@ in with self; { base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; }; base64url = derive2 { name="base64url"; version="1.4"; sha256="0n1c2b68vza1dh7sk38v6biiwm72c4jpl79kpdg1bsb0hq9qy18x"; depends=[backports]; }; baseballDBR = derive2 { name="baseballDBR"; version="0.1.2"; sha256="0w54g1avcqamc12lmvjchlqbqck9jfjccm441k03nsql460mpydq"; depends=[dplyr magrittr rvest xml2]; }; - baseflow = derive2 { name="baseflow"; version="0.11.2"; sha256="10y73s22xmrzvm697vdmnr7zal83jrxy4ifvskyhdqzsljj53p3j"; depends=[airGR]; }; - basefun = derive2 { name="basefun"; version="1.0-6"; sha256="08ys5iqzbf95pimgaj1g2q7lwhxj73jc737ap55358h75dx0nzdx"; depends=[Matrix orthopolynom polynom variables]; }; - baseline = derive2 { name="baseline"; version="1.2-2"; sha256="044m1znvz2c6h0z7x4zkqxld2l138kpv2pirbiz41pk72gvzv50v"; depends=[SparseM]; }; + baseflow = derive2 { name="baseflow"; version="0.12.0"; sha256="0zz7clrqifxk0igvqr38ic8sif86nli8gp8np8nfx89md2zz1njk"; depends=[airGR]; }; + basefun = derive2 { name="basefun"; version="1.0-7"; sha256="1g72g77yzf6ji4aglm4hpaqbz5ma2d6y93g7r17066iwyzl0ygn3"; depends=[Matrix orthopolynom polynom variables]; }; + baseline = derive2 { name="baseline"; version="1.2-3"; sha256="1d8k5py3wn82nm9pnsnh9ylbdkmkm3j938cdil3igwd3qzkjp63b"; depends=[limSolve SparseM]; }; basetheme = derive2 { name="basetheme"; version="0.1.2"; sha256="0yck4qc7qd406s7kw95xgnfc0pfvzk3ylhkv6mk6l2wbkfm8ldrb"; depends=[]; }; - basicMCMCplots = derive2 { name="basicMCMCplots"; version="0.2.4"; sha256="03mggvdasqrkq41dpfwsrhnxh98hfqfr3z58hrfhnjrzydwxbci9"; depends=[]; }; + basicMCMCplots = derive2 { name="basicMCMCplots"; version="0.2.5"; sha256="0sdvhm7n9n67gwymv7whk6f6lfgp74gczisqw90096la566ndd2f"; depends=[]; }; basicTrendline = derive2 { name="basicTrendline"; version="2.0.3"; sha256="10rq9hriyn50b28ikvl0vsvchbkrc0pjzxamq4ix1xd04n4drkl9"; depends=[investr scales]; }; basicspace = derive2 { name="basicspace"; version="0.24"; sha256="1cy226njbax7dcgql89fns4l4w9fq328x3h0vb93l5jk883jgi8h"; depends=[]; }; - basictabler = derive2 { name="basictabler"; version="0.3.0"; sha256="1dzjdgc8ffnr219m5zb410ln1rbnzz96g1aqb70pkg9gp0ykgk29"; depends=[dplyr htmltools htmlwidgets jsonlite R6]; }; - basket = derive2 { name="basket"; version="0.9.10"; sha256="1773f0abhz854sdb0jfhmfpgxpkagb3x6mzi77jycfl6ywhry48h"; depends=[cli crayon dplyr foreach GenSA ggplot2 gridExtra igraph itertools RColorBrewer tibble tidyr]; }; + basictabler = derive2 { name="basictabler"; version="0.3.1"; sha256="1yrrg0mgxfqrn068ggx7b5xqj8wccigb5x6aya2hw3b035cbfprs"; depends=[dplyr htmltools htmlwidgets jsonlite R6]; }; + basket = derive2 { name="basket"; version="0.10.1"; sha256="1hwcfm7hgi6khqkw643n5i40pmr55117b6fh5als91r60k966w2m"; depends=[cli crayon dplyr foreach GenSA ggplot2 ggraph gridExtra igraph itertools RColorBrewer rlang tibble tidygraph tidyr]; }; bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; }; batade = derive2 { name="batade"; version="0.1"; sha256="1lr0j20iydh15l6gbn471vzbwh29n58dlpv9bcx1mnsqqnsgpmal"; depends=[hwriter]; }; batch = derive2 { name="batch"; version="1.1-5"; sha256="0wdgfvk2i542cqg34ikvzwlix09f2jyjb32a0f4zh9vg9nrywswq"; depends=[]; }; @@ -5341,21 +5344,21 @@ in with self; { batchtools = derive2 { name="batchtools"; version="0.9.12"; sha256="16x524hvy9d8p7r4fi1c8mixcvzgsjbf3y0vxaa56ssbbab4p7f9"; depends=[backports base64url brew checkmate data_table digest fs progress R6 rappdirs stringi withr]; }; batman = derive2 { name="batman"; version="0.1.0"; sha256="0ccgx506p4iri23k2ikb8jmh04dp08w66785bv52iy8kd359h43f"; depends=[Rcpp]; }; batteryreduction = derive2 { name="batteryreduction"; version="0.1.1"; sha256="0j838q7063bplkzd50kmnxji80cgysfsq7m1qifv8z7a2zsh8c8g"; depends=[pracma]; }; - baycn = derive2 { name="baycn"; version="1.0.0"; sha256="1wjm7isdvb4z5lyhix849sxzngbmk8ccdvc8qgjgdcfmnx15binq"; depends=[egg ggplot2 MASS]; }; - bayes4psy = derive2 { name="bayes4psy"; version="1.2.0"; sha256="0dv285nq44a971hyha8rkynac3gaq78pp5bicmznxds53lhnw2ji"; depends=[BH circular cowplot dplyr emg ggplot2 mcmcse metRology Rcpp RcppEigen reshape rstan rstantools StanHeaders]; }; + baycn = derive2 { name="baycn"; version="1.1.0"; sha256="1nimy9vc1i9an9992wwdr0qq8zi9363rjiv5ci81wliys1qlggaq"; depends=[egg ggplot2 gtools MASS]; }; + bayes4psy = derive2 { name="bayes4psy"; version="1.2.3"; sha256="0f8rlivqc36x15c16dybpqgankhc73gcn206yhnr7nyb896nfnl0"; depends=[BH circular cowplot dplyr emg ggplot2 mcmcse metRology Rcpp RcppEigen reshape rstan rstantools StanHeaders]; }; bayesAB = derive2 { name="bayesAB"; version="1.1.2"; sha256="0xg29s3h4dy43snlc365q80ix96hwh4mfy1qvv87yys3i9zfinm5"; depends=[ggplot2 Rcpp rlang]; }; - bayesCL = derive2 { name="bayesCL"; version="0.0.1"; sha256="1l278lxidn16nma2ny14wjajcqyzbr6j5xl2lj08cic26c7hvjbm"; depends=[]; }; - bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.0"; sha256="1s2b8f43wi9ja966n2p2r4l4s79vk6xb8mqaxsagnw90g969p681"; depends=[coda numDeriv]; }; + bayesCT = derive2 { name="bayesCT"; version="0.99.2"; sha256="11y22xg7f47vj47pd5z44g20ff2jjn67s39win0qngl69ii1ph98"; depends=[bayesDP dplyr magrittr msm purrr survival]; }; + bayesDP = derive2 { name="bayesDP"; version="1.3.3"; sha256="0g2kw8rsa9s5ahvsr4j363nqs4s49pmbaxgsqrlg8nizjsmj8p49"; depends=[ggplot2 MCMCpack Rcpp RcppArmadillo survival]; }; bayesDem = derive2 { name="bayesDem"; version="2.5-1"; sha256="1cxrqil1p692mbzkcj1fvsx335qyy6c1y43mq48s4shs1hhc69bn"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; }; bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.3"; sha256="1480mmzfshchfbfh3x420cq5qblfh59jkl21hkq2jvnwppksdn9w"; depends=[coda mvtnorm]; }; bayesImageS = derive2 { name="bayesImageS"; version="0.6-0"; sha256="1m0az3z8hwaxpqd1ljly9vlp41dp7c7p39r0rx7k9vcs201vlcg8"; depends=[Rcpp RcppArmadillo]; }; bayesLife = derive2 { name="bayesLife"; version="4.1-0"; sha256="1sswnwv4x77sd07d3hpsf3wfd5szrdnc4fni8glzl8rk3y0r3jns"; depends=[bayesTFR car coda data_table hett wpp2019]; }; bayesPop = derive2 { name="bayesPop"; version="8.1-1"; sha256="1xhzind6k23rcgy1iw0bqks6wz77755qs9pw6sqinfi8qbv0ax1l"; depends=[abind bayesLife bayesTFR data_table fields googleVis MortCast plyr reshape2 rworldmap wpp2012 wpp2019]; }; bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; }; - bayesSurv = derive2 { name="bayesSurv"; version="3.2"; sha256="1zp302pfi64nnqdiqldvfi1lm0wv2dplz5sfjp0ydl1qc16z0axp"; depends=[coda smoothSurv survival]; }; + bayesSurv = derive2 { name="bayesSurv"; version="3.3"; sha256="00brysldz0zbjbjs0qnd2mbpc3ipyz7224bnbwlf8d3b6ivw8iwv"; depends=[coda smoothSurv survival]; }; bayesTFR = derive2 { name="bayesTFR"; version="6.4-0"; sha256="159lcii3hpl91vypl16adzair6ik85fyjybyy6fjibxvjkn3fh3b"; depends=[coda MASS mvtnorm wpp2019]; }; bayesammi = derive2 { name="bayesammi"; version="0.1.0"; sha256="1vfcmk47x71c5akj3ppxzb74293pikspknkkv08f8p15v0chk7fs"; depends=[dplyr ggplot2 lme4 magrittr MASS mvtnorm rlang rstiefel scales tibble tidyr tmvtnorm]; }; - bayesanova = derive2 { name="bayesanova"; version="1.2"; sha256="1qn3bjy2k12xg67xrlscrl6nql2g0v3i3r5c0349xpq1ya2kaiya"; depends=[]; }; + bayesanova = derive2 { name="bayesanova"; version="1.3"; sha256="11ask03l4s0459bbd968686hsbzgmm5qjwjwb9nqvfaqhwmjl0z2"; depends=[]; }; bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; }; bayesboot = derive2 { name="bayesboot"; version="0.2.2"; sha256="0976ryd0gbw3kpmxg2qxyp1m2swnrpa86vdhvqrqxp7fcrs8cs2z"; depends=[HDInterval plyr]; }; bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; }; @@ -5373,28 +5376,28 @@ in with self; { bayesreg = derive2 { name="bayesreg"; version="1.1"; sha256="12g5sklip3i8fpzrhvbikhgnl6kx8fxb88hfv8f34jy71r3h7zyp"; depends=[pgdraw]; }; bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; }; bayest = derive2 { name="bayest"; version="1.1"; sha256="0nl3zq5bp6yqw351vcrzph5y0jn9bml7isf4nsxl7braivalf72n"; depends=[]; }; - bayestestR = derive2 { name="bayestestR"; version="0.5.0"; sha256="172ilq2h8gkn6ggxafvkjq7bgjs2rymm15w5b4ql7i8cv41cdll2"; depends=[insight]; }; + bayestestR = derive2 { name="bayestestR"; version="0.5.2"; sha256="1l0kqw793d8fnk0745fllmqwjwnj9srvqzv4baq5s05ls1gbi2mw"; depends=[insight]; }; bayesvl = derive2 { name="bayesvl"; version="0.8.5"; sha256="1gb2in8hjiqb3daqz6phn1639i6p2w641kxrm3zh4rm3d6hg6hzr"; depends=[bayesplot bnlearn coda dplyr ggplot2 reshape2 rstan StanHeaders viridis]; }; bayfoxr = derive2 { name="bayfoxr"; version="0.0.1"; sha256="1295296mbjpmd0bg1pfxvyp0az3sry6gsq9ir3l8x64w5a4qrzd5"; depends=[]; }; baymedr = derive2 { name="baymedr"; version="0.1.0"; sha256="0y01s6dpnhnxqqvl15cdxmb5ysb685bbp47xifyp5nz8sjh2pci0"; depends=[rlang stringr]; }; - bayou = derive2 { name="bayou"; version="2.1.1"; sha256="17gvb2dmviwibnlqn6p3p9pcc3705xh9r8lrm90p0yg7nhm0cn02"; depends=[ape assertthat coda denstrip fitdistrplus foreach geiger MASS Matrix mnormt phytools Rcpp RcppArmadillo]; }; baystability = derive2 { name="baystability"; version="0.1.0"; sha256="1zv4bf5a4p21w2qpr6lcsgsxb0xv15v8p33031rsypmnbs9i80dp"; depends=[dplyr ggfortify ggplot2 lme4 magrittr MASS matrixStats reshape2 rlang rstiefel scales tibble tidyr tidyverse]; }; baytrends = derive2 { name="baytrends"; version="1.1.0"; sha256="0yml560cbamp7pf433va28vsfi5rcrjm61rbk8384bbjlslpsdkj"; depends=[dataRetrieval digest gdata lubridate memoise mgcv plyr survival XML zCompositions]; }; bazar = derive2 { name="bazar"; version="1.0.11"; sha256="1q2w5pvlb51lzbb5k719sf1lrhffandkfqlcvi2prw4dmq7qjxv9"; depends=[kimisc]; }; bbefkr = derive2 { name="bbefkr"; version="4.2"; sha256="1wjx652w3p41sq71a2zdzmb7frjxm6xvcgrc2ark2spwb0lbjjw6"; depends=[]; }; bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; }; - bbl = derive2 { name="bbl"; version="0.3.0"; sha256="0vlmdxhq9vgyff6sab6i90rq54z09kqdckysmhfcdr05zfwgcd5l"; depends=[pROC RColorBrewer Rcpp]; }; - bbmle = derive2 { name="bbmle"; version="1.0.22"; sha256="1idn55w5f3iw4r0ydyww8xyinninw07sxlwfqb565vmdrs87dwl4"; depends=[bdsmatrix lattice MASS Matrix mvtnorm numDeriv]; }; + bbl = derive2 { name="bbl"; version="0.3.1"; sha256="1a6f5744xwn28qkqxlc5q7crarlx0jjg4z7wpp7jwr6ar152apvm"; depends=[pROC RColorBrewer Rcpp]; }; + bbmle = derive2 { name="bbmle"; version="1.0.23.1"; sha256="0p3l9shbr2846qmw8n0fyzf4j7gmi08aypl82jml3dwh26q1whk0"; depends=[bdsmatrix lattice MASS Matrix mvtnorm numDeriv]; }; bbo = derive2 { name="bbo"; version="0.2"; sha256="19xrbla3bb3csg3gjjrpkgyr379zfwyh293bcrcd6j8rnm6g4i01"; depends=[]; }; bbw = derive2 { name="bbw"; version="0.1.3"; sha256="1z3an561qh0rfi3jhh1ghsdbg8aimqmf4hpqri2jz39in3p0gwg4"; depends=[car]; }; bc3net = derive2 { name="bc3net"; version="1.0.4"; sha256="15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h"; depends=[c3net igraph infotheo lattice Matrix]; }; - bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-3"; sha256="1g9l4abnpp1iq5wy3rl2jv47ql9zh6s2qrhyj06x22358lpinjnl"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; + bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-4"; sha256="0bhwwr9pa78a8lhjz2cfbm09jq585p89l6dr2ihpil4q5r8cmsjr"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; bcRep = derive2 { name="bcRep"; version="1.3.6"; sha256="1fibx11ykkkjv4sgg6zc2a0g270384z2cf68hwghnld0wi002b5z"; depends=[ape doParallel foreach gplots ineq plotrix proxy stringdist vegan]; }; bcaboot = derive2 { name="bcaboot"; version="0.2-1"; sha256="0wf1igkb0lidz4pvh3kfccs9858m1g9650wprrvrpwsdfrcd7rc9"; depends=[]; }; bcdata = derive2 { name="bcdata"; version="0.1.2"; sha256="0h5mrcpq64d2i9q6m5n8bq4g06zfyyscllwg6k1zm22vsw1yi1ki"; depends=[cli crul dbplyr dplyr glue jsonlite leaflet leaflet_extras purrr readr readxl rlang sf tidyselect xml2]; }; bcf = derive2 { name="bcf"; version="1.3"; sha256="1f8szjgsyhnff3zzmmy7bnsam12ywj46n3fxsj1y3fn1m5wnd8mz"; depends=[Rcpp RcppArmadillo]; }; bcgam = derive2 { name="bcgam"; version="1.0"; sha256="1dg2fcjw8xal77irviiz260qpar2iqkjvi2k4qfm71jyq0ir0axk"; depends=[coda igraph nimble]; }; bcmaps = derive2 { name="bcmaps"; version="0.18.0"; sha256="0zq5fp9r6n2mpjd96ri7lmp63g8lm5sjwgfmc4cligrch3kakzxy"; depends=[httr rappdirs sf]; }; + bcmixed = derive2 { name="bcmixed"; version="0.1.3"; sha256="1zzxg946xgviwcwnjamcg21c5qhyi2ql871lblkcyy35ffcran7l"; depends=[MASS nlme]; }; bcp = derive2 { name="bcp"; version="4.0.3"; sha256="0vhs89lb2wpanqsljclpvwbjmgdsc3jicws8bzqiqh8mbs3nzpxy"; depends=[Rcpp RcppArmadillo]; }; bcpa = derive2 { name="bcpa"; version="1.1"; sha256="0rwbd39szp0ar9nli2rswhjiwil31zgl7lnwm9phd0qjv8q0ppar"; depends=[plyr Rcpp]; }; bcpmeta = derive2 { name="bcpmeta"; version="1.0"; sha256="02fw1qz9cvr7pvmcng7qg7p04wxxpmvb2s8p78f52w4bf694iqhl"; depends=[mvtnorm]; }; @@ -5402,11 +5405,13 @@ in with self; { bcrypt = derive2 { name="bcrypt"; version="1.1"; sha256="1wwdin8x09y8n8zrwj1ylh5ikcz0v0la4wmrsvbdr61cg336wzx4"; depends=[openssl]; }; bcv = derive2 { name="bcv"; version="1.0.1"; sha256="0yqcfariw9sw0b8cpljcr7vf5rf0cwr1wbif23icchfaxk2m42gj"; depends=[]; }; bdDwC = derive2 { name="bdDwC"; version="0.1.15"; sha256="0yraq8a0wgz12rzi2dx0gdcz5rx99qd2pzw972wjqyq3rs41pwx0"; depends=[shiny shinyBS shinydashboard shinyFiles shinyjs]; }; + bda = derive2 { name="bda"; version="14.1.4"; sha256="1jjx2lsggb29agrxn8v5v6sivzm4xdw6zrbkbj2d18wgkxwi5z6x"; depends=[]; }; bdchecks = derive2 { name="bdchecks"; version="0.1.7"; sha256="1pzsvn1m1f9bdmhxmh57pvn9jm4z41rkvv6h60hq2lfgkapnjy7q"; depends=[bdDwC data_table DT finch knitr rgbif shiny shinyBS shinydashboard shinyjs spocc yaml]; }; bdclean = derive2 { name="bdclean"; version="0.1.15"; sha256="14cy8yaqd6bg2zyh2wvndydk9sigaydavxl4cfypqz5kqdhj82z9"; depends=[bdchecks bdDwC data_table DT finch knitr leaflet rgbif rmarkdown shiny shinydashboard shinyjs spocc]; }; bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; }; + bdl = derive2 { name="bdl"; version="1.0.1"; sha256="0ysx452ayp0mca3gn7aazy88xxcv9njckd682vinc2rrlzkl3qfi"; depends=[dplyr ggplot2 ggpubr httr jsonlite lwgeom magrittr purrr randomcoloR sf tibble tidyr tmap tmaptools]; }; bdots = derive2 { name="bdots"; version="0.1.19"; sha256="1cj6ly62d50z6713119hadl90cxf5x30wpnpx6mssmd49zds6nxb"; depends=[doParallel doRNG foreach Matrix mvtnorm nlme]; }; - bdpar = derive2 { name="bdpar"; version="1.0.1"; sha256="1i0xhw0nqdpmmddvfp4scf3wgld7ng2pcw8685grv5vxrlgc308p"; depends=[ini magrittr pipeR purrr R6 rlist svMisc]; }; + bdpar = derive2 { name="bdpar"; version="2.0.0"; sha256="0vn53pzr8j3jdl03jzcyjgf0n486l472jm3mm92df3219733l2wi"; depends=[magrittr pipeR purrr R6 rlist]; }; bdpopt = derive2 { name="bdpopt"; version="1.0-1"; sha256="1z7mdqklw3frsdzyhvx8s8wvblwm28fr1gca2yrivqjng0r47lx4"; depends=[coda rjags]; }; bdpv = derive2 { name="bdpv"; version="1.3"; sha256="0wcnmamqrbqwskgv2yhnxq2kb179n63c825y9hsl20rfca0ijh6m"; depends=[]; }; bdribs = derive2 { name="bdribs"; version="1.0.4"; sha256="19qakmdw3l8vfxkr4p1ydkyfs4cmq37lqzw7l5zx5rdn6zlhqwh4"; depends=[rjags]; }; @@ -5417,43 +5422,43 @@ in with self; { bea_R = derive2 { name="bea.R"; version="1.0.6"; sha256="15pdbwz7av8862bl144n998qk0w9rqwip9m2brdm5hj7id5xdlif"; depends=[chron colorspace data_table DT ggplot2 googleVis gtable htmltools htmlwidgets httpuv httr jsonlite magrittr munsell plyr Rcpp scales shiny shinydashboard stringi stringr xtable yaml]; }; beadarrayFilter = derive2 { name="beadarrayFilter"; version="1.1.0"; sha256="044dq5irc00v2f2gjz0vb69w7q7b84lppc55ganabdv4f0dxdblc"; depends=[beadarray RColorBrewer]; }; beadarrayMSV = derive2 { name="beadarrayMSV"; version="1.1.0"; sha256="0785vmjsli37hjyppk7hlqmn0b683s1apysx9dghbw4h6rgvr8n9"; depends=[Biobase geneplotter limma rggobi]; }; - beadplexr = derive2 { name="beadplexr"; version="0.2.0"; sha256="0ci19jai28hizcfdgj3a69vw20yk25xg6vp6fk1xhkkp0hh9wnd2"; depends=[cluster dplyr drc flowCore fpc ggplot2 lazyeval magrittr mclust purrr raster tibble tidyr yaml]; }; - beam = derive2 { name="beam"; version="2.0.0"; sha256="1b61cabaw3pixzmzsrxh4mnbdrnxfd7ffyibn3kgk1dr0sc9d1da"; depends=[assertthat BH fdrtool igraph knitr Matrix Rcpp RcppArmadillo]; }; + beadplexr = derive2 { name="beadplexr"; version="0.3.0"; sha256="05wd8yk5pkrnfx18lf1s4n4chvijrg0pr0m4vflgzfdq6khrbmav"; depends=[cluster dplyr drc flowCore fpc ggplot2 lazyeval magrittr mclust purrr raster tibble tidyr yaml]; }; + beakr = derive2 { name="beakr"; version="0.3.1"; sha256="1mir7scqwmsqs6hhi0xramdxk75x7zs4ppwrgc688y8j7dgg01ys"; depends=[base64enc httpuv jsonlite magrittr mime R6 stringr webutils]; }; + beam = derive2 { name="beam"; version="2.0.1"; sha256="0z95d5kjfv6byk8j5smkn74kgcircav739jrawmx161lxvznf49i"; depends=[assertthat BH fdrtool igraph knitr Matrix Rcpp RcppArmadillo]; }; beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; }; beanz = derive2 { name="beanz"; version="2.4"; sha256="18i4ygz83l60fdfkl4yg9kp5n2vmqn6yd7qkpkiplq0mzg5s4nk9"; depends=[BH loo Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; beast = derive2 { name="beast"; version="1.1"; sha256="0ikbnzdzp2lv1nh5mxxanra81v4dl6svg3ywqcqd6wgzri70a4ry"; depends=[RColorBrewer]; }; beastier = derive2 { name="beastier"; version="2.1.1"; sha256="17qzjk4lq83khj5f04jhkr3q2w7snv4aq4zrbnsziszwnlazyqqy"; depends=[ape assertive beautier phangorn rappdirs remotes rJava stringr xml2]; }; - beautier = derive2 { name="beautier"; version="2.3.2"; sha256="0wwlv1z030mi2q895z9m9xpkfq348ka3ljyiaddzp9niappszpcj"; depends=[ape assertive geiger rappdirs seqinr stringr testit]; }; + beats = derive2 { name="beats"; version="0.1.1"; sha256="1vg8h2lyn61lii346pf3b5vwxf5cfswmi4b5mmimvgx1ix2i6sxb"; depends=[dplyr ggplot2 lubridate purrr readr shiny zoo]; }; + beautier = derive2 { name="beautier"; version="2.3.5"; sha256="12yiq8z95w69gch9kd15p8vvwx8i2q6gpgix5ih2h6x5g4gzl72a"; depends=[ape assertive pryr rappdirs seqinr stringr testit]; }; bedr = derive2 { name="bedr"; version="1.0.7"; sha256="0zpqvyjgwyqawxm8qrhcv8zq2b3yxgcqkkc87br29yrl7sjb8h6j"; depends=[data_table R_utils testthat VennDiagram yaml]; }; beepr = derive2 { name="beepr"; version="1.3"; sha256="061sfld23b516jws4llml0a4jsdk4z74rll4z58l2rvahkqsdrfp"; depends=[audio stringr]; }; beeswarm = derive2 { name="beeswarm"; version="0.2.3"; sha256="0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581"; depends=[]; }; beezdemand = derive2 { name="beezdemand"; version="0.1.0"; sha256="1i6p36cfvz87k6llpibklmdbjb7vp1v38ijxaqkmv1jzc28sj3cl"; depends=[ggplot2 nlmrt nls2 nlstools reshape2]; }; beginr = derive2 { name="beginr"; version="0.1.7"; sha256="1a1lzjmq0qimm8yrb4n6knh23gyqxgax60n95rih95sg34904d0m"; depends=[cranlogs]; }; - behaviorchange = derive2 { name="behaviorchange"; version="0.2.1"; sha256="12dakzc3k85na3wvnwisynpzy4i2vw2i2amkrf4lf6rahn0rkfs1"; depends=[BiasedUrn data_tree DiagrammeR DiagrammeRsvg ggplot2 googlesheets gridExtra gtable magrittr ufs viridis]; }; + behaviorchange = derive2 { name="behaviorchange"; version="0.2.2"; sha256="1xqvlybfmgpr0dg0ys6yjshlghgph6zg81d3bbx8cpbxdysm8lkl"; depends=[BiasedUrn data_tree DiagrammeR DiagrammeRsvg ggplot2 googlesheets gridExtra gtable magrittr png ufs viridis yum]; }; behavr = derive2 { name="behavr"; version="0.3.2"; sha256="01ny099m2zmvlalwiq3nqkgynnxn1mdspch15lkawwd40q8s9s4p"; depends=[data_table]; }; belex = derive2 { name="belex"; version="0.1.0"; sha256="1563yngc1lvncmx3h6kgsj1r6k3hvxidh6h9rb7apxs2rq5k32ms"; depends=[XML]; }; - belg = derive2 { name="belg"; version="1.0.1"; sha256="162f3rayxz05qzfbry4x98aissyd8gzcp7aa1x59q0vl8jd5dcid"; depends=[Rcpp RcppArmadillo]; }; bench = derive2 { name="bench"; version="1.1.1"; sha256="1ldqmf0anwgw6b9jgy5mnnjjncayc1x54pvjm6f5gqv0225ksdw3"; depends=[glue pillar profmem rlang tibble]; }; benchden = derive2 { name="benchden"; version="1.0.5"; sha256="1cwcgcm660k8rc8cpd9sfpzz66r55b4f4hcjc0hznpml35015zla"; depends=[]; }; benchmarkme = derive2 { name="benchmarkme"; version="1.0.3"; sha256="003d97rs0gb6l6hq7d4lxgdngrgb5lii6fxw2n7l50m14hib2sv2"; depends=[benchmarkmeData doParallel dplyr foreach httr Matrix tibble]; }; benchmarkmeData = derive2 { name="benchmarkmeData"; version="1.0.3"; sha256="1qiw9d93y4m2ch20hsgvf1k3r9dqf60mrdr6cc647m1qv2syjgrk"; depends=[dplyr tibble]; }; - benchr = derive2 { name="benchr"; version="0.2.3-1"; sha256="1q8g9v7zbspd2gmydwwfi3avdsnmn5ahr9iybdqsicgfch5plsf5"; depends=[Rcpp RcppProgress]; }; + benchr = derive2 { name="benchr"; version="0.2.5"; sha256="1xh1n41ll50zz3v26i8lg5f92i90rc78ywnl0rczryh621whx80n"; depends=[Rcpp RcppProgress]; }; bender = derive2 { name="bender"; version="0.1.1"; sha256="07npksrj094h884lli0fjvwjc1lhcwzlsk9wx82761mka5xajv4v"; depends=[httr jsonlite R6]; }; benford_analysis = derive2 { name="benford.analysis"; version="0.1.5"; sha256="0y0c7l2r9s7lg9bw4ndcqwisa5l6a2cpydn1vmz88h3yva0l68cg"; depends=[data_table]; }; bentcableAR = derive2 { name="bentcableAR"; version="0.3.0"; sha256="1gjrlv94av9955jqhicaiqm36rrgmy0avxn9y7wbp2s1sbg7fyg7"; depends=[]; }; benthos = derive2 { name="benthos"; version="1.3-6"; sha256="1vywnc6k37gpaq7g59v3qa6619svcmnd8ri5zm5l0ila2s3ccb2c"; depends=[dplyr lazyeval readr]; }; - ber = derive2 { name="ber"; version="4.0"; sha256="0gl7rms92qpa5ksn8h3ppykmxk5lzbcs13kf2sjiy0r2535n8ydi"; depends=[MASS]; }; berryFunctions = derive2 { name="berryFunctions"; version="1.18.2"; sha256="0yicwsz6v5nffvw2wmjmc2zhcik7avz3xmj8zhb77xhaq9dazk9s"; depends=[abind]; }; - bestNormalize = derive2 { name="bestNormalize"; version="1.4.2"; sha256="0df4fspcmf8scifgy2v69qlqp7zzyicjmscmyxp1m8wzd7cwzd0q"; depends=[doParallel doRNG dplyr foreach LambertW nortest]; }; + bestNormalize = derive2 { name="bestNormalize"; version="1.4.3"; sha256="14snx2cv0bmks8lfvmvaggazak8fjch3143922lb3b1pnvcpxhg5"; depends=[doParallel doRNG dplyr foreach LambertW nortest]; }; bestSDP = derive2 { name="bestSDP"; version="0.1.2"; sha256="1rff6jij9wmlpalzilvid8jvj2pczrchx0yrg0vhy00j64zg6jzs"; depends=[dplyr DT ggplot2 readxl rlist shiny shinyBS shinydashboard shinyjs shinythemes shinyWidgets stringr tidyr]; }; - bestglm = derive2 { name="bestglm"; version="0.37.1"; sha256="13wd1jnh9d82s4qz81k78y1v47ld0csdgn9k4izca2g039jqjxmq"; depends=[glmnet grpreg lattice leaps pls]; }; + bestglm = derive2 { name="bestglm"; version="0.37.3"; sha256="1zncy958hlwyyxrp6yvq1inq6mpyrbr6cdkf8maijfirr5j8f0ya"; depends=[glmnet grpreg lattice leaps pls]; }; betaboost = derive2 { name="betaboost"; version="1.0.1"; sha256="1zdyzxl2kp2i5lkiz280wz4av9wqklbn25zmq6n4yb6a579yjfn8"; depends=[gamboostLSS mboost]; }; betacal = derive2 { name="betacal"; version="0.1.0"; sha256="19wgpgf9yhckl9qx9v24f4yh055wfalphcxwm7lg68px6ap2pxl9"; depends=[]; }; betafam = derive2 { name="betafam"; version="1.0"; sha256="1nf5509alqnr5qpva36f1wb7rdnc084p170h91jv89xvzsidqxca"; depends=[]; }; betalink = derive2 { name="betalink"; version="2.2.1"; sha256="1wskr8nh1jzcrnc8fn58lscphsvj5z9p1i1pnpfdjn60mdb09rkp"; depends=[igraph plyr stringr]; }; betapart = derive2 { name="betapart"; version="1.5.1"; sha256="0j72rfvnn0ag6vxp8nw5v68n3qblyp5gd0y8z1kchs4dbq1v288g"; depends=[ape fastmatch geometry picante rcdd]; }; - betareg = derive2 { name="betareg"; version="3.1-2"; sha256="0k9g39wgdr10rvcl8aq3vxm7vfix9cvdxd4nz4cg59vi4l82f239"; depends=[flexmix Formula lmtest modeltools sandwich]; }; - betas = derive2 { name="betas"; version="0.1.1"; sha256="1v85r6lrk21viwzam42gi42bgbwh5ibn3dpbh3aqrf3dnn1rdsyd"; depends=[robust]; }; + betaper = derive2 { name="betaper"; version="1.1-1"; sha256="0ids2k783lrrf376nfccflzp3alrq15ym484ixjcnxxz84ncmmcl"; depends=[vegan]; }; + betareg = derive2 { name="betareg"; version="3.1-3"; sha256="0ik2qydr75dwaphw35l1myi50fbkw43zmkarrw8jsj8nqmz3h6fc"; depends=[flexmix Formula lmtest modeltools sandwich]; }; betategarch = derive2 { name="betategarch"; version="3.3"; sha256="0hqvyps3lwix2fkzk18wrkhxpqhgardvib9sq1ip8gn8sn1dsi8y"; depends=[zoo]; }; bethel = derive2 { name="bethel"; version="0.2"; sha256="1zlkw672k1c5px47bpa2vk3w2906vkhvifz20h6xm7s51gmm64i0"; depends=[]; }; beyondWhittle = derive2 { name="beyondWhittle"; version="1.1.1"; sha256="1nr414wvfwycp3s9v592jd4gk5wdjfklk7ypqabx73k5fsxrcc0g"; depends=[BH forecast ltsa MASS MTS Rcpp RcppArmadillo]; }; @@ -5465,27 +5470,24 @@ in with self; { bgeva = derive2 { name="bgeva"; version="0.3-1"; sha256="0qm4xknyab8hdyn3in2hsvm8s062cnmqqf41b5jvax1mi5hs0z8c"; depends=[magic mgcv trust]; }; bggum = derive2 { name="bggum"; version="1.0.2"; sha256="04vr9z81awavkhk3lbi8yasmi242lrbnq0pzqp38xlrn5xkf8b1w"; depends=[Rcpp RcppDist]; }; bgmfiles = derive2 { name="bgmfiles"; version="0.0.6"; sha256="10qldfjjq5fx5jrrakdxc8k2pf0vp8ifg18nq56lvx9n28mqigim"; depends=[]; }; - bgmm = derive2 { name="bgmm"; version="1.8.3"; sha256="09hsqjjyzlpl0fqb7832j5ydrr0yc42zb1c9q1y5hbrms7yp00p8"; depends=[car combinat lattice mvtnorm]; }; + bgmm = derive2 { name="bgmm"; version="1.8.4"; sha256="1r8qd4niah18jg0lw3vqq1465likal5j7nvlgnblpidd5svn4a2n"; depends=[car combinat lattice mvtnorm]; }; bgsmtr = derive2 { name="bgsmtr"; version="0.7"; sha256="17706qims9637ppwg0vszkcm6kmvhzyrdihkgigpiv5lknhk2q3m"; depends=[CholWishart coda EDISON glmnet inline LaplacesDemon Matrix matrixcalc miscTools mnormt mvtnorm Rcpp sparseMVN statmod]; }; bhm = derive2 { name="bhm"; version="1.15"; sha256="1xfm1k3wf4k1c65pd9201c00y4qda3lw9aycjh6q34ixyl6g5jg5"; depends=[coda MASS survival]; }; - bhrcr = derive2 { name="bhrcr"; version="1.0.3"; sha256="1w52f4ghl328vdcr8hwvmdrnxnj45fy4r21yqzg5q1fpd4mpjw2i"; depends=[AER Cairo MASS MCMCpack msm mvtnorm survival]; }; biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; }; bib2df = derive2 { name="bib2df"; version="1.1.1"; sha256="0d57883df774qqwpssmly3f1gci32yc5sgwc3x8f2rjih23s1nf6"; depends=[dplyr httr humaniformat stringr]; }; bibliometrix = derive2 { name="bibliometrix"; version="2.3.2"; sha256="02sikbjnsfd1gxwlbdiafp35af22gmz2p6i951l3syxpcvylxfc8"; depends=[dplyr DT factoextra FactoMineR ggplot2 ggraph ggrepel igraph Matrix networkD3 RColorBrewer reshape2 rio RISmed rscopus shiny shinycssloaders shinythemes SnowballC stringdist stringr]; }; bibtex = derive2 { name="bibtex"; version="0.4.2.2"; sha256="140hkjzdp3033cvji861rd06z1ixgpnn4n5amygqsmhnixk8ff07"; depends=[stringr]; }; - biclique = derive2 { name="biclique"; version="1.0.4"; sha256="0jflbl1fbi3v3igi447f8i2zs9vh84xk1rci6dmwm0k9s9zqfrs2"; depends=[]; }; - biclust = derive2 { name="biclust"; version="2.0.1"; sha256="1y5n6wfa1lx88ck3x09rcg0dh3pw89225h85hmq2la1s1fpa48i0"; depends=[additivityTests colorspace flexclust ggplot2 lattice MASS tidyr]; }; - biclustermd = derive2 { name="biclustermd"; version="0.2.0"; sha256="075qr8bizwf08zac87a0xhhcgf1d3qvdd29jwl79yd63vlczf38k"; depends=[biclust clues doParallel dplyr foreach ggplot2 magrittr nycflights13 tidyr]; }; + biclique = derive2 { name="biclique"; version="1.0.5"; sha256="1fdf2r1jc2x8yw0fcw7yyjdxz4b870w6y7mr68qixqxwpl6943zq"; depends=[]; }; + biclust = derive2 { name="biclust"; version="2.0.2"; sha256="1pk7mvwlg4hkc4cn4w6wr2c192qx03d1xfwlzclk5bw1nmcg483b"; depends=[additivityTests colorspace flexclust ggplot2 lattice MASS tidyr]; }; + biclustermd = derive2 { name="biclustermd"; version="0.2.1"; sha256="0raszh41yag08icxm1g2jbsg4xxkxmc8kn7viz0ns08w3snpvr2v"; depends=[biclust clusteval doParallel dplyr foreach ggplot2 magrittr nycflights13 phyclust tidyr]; }; bife = derive2 { name="bife"; version="0.7"; sha256="04wnc6n3wcykzmhrnd2zkj507ymzbw1n8wssi3bwcylanzj59a3h"; depends=[data_table Formula Rcpp RcppArmadillo]; }; bigGP = derive2 { name="bigGP"; version="0.1-6"; sha256="0fwm06rzx1qbh16ii93x26i4v4yb50jk67k3qmzyr3gr4z9b9xhg"; depends=[Rmpi]; }; - bigKRLS = derive2 { name="bigKRLS"; version="3.0.5.1"; sha256="1za8pxij1nwpdz3lz51zqib99pc73s92lz0k01fkcgw5rj78kgs8"; depends=[BH bigalgebra biganalytics bigmemory ggplot2 Rcpp RcppArmadillo shiny]; }; bigMap = derive2 { name="bigMap"; version="2.1.0"; sha256="0bpnzz3acqn006jk8db5yyvbhl3sq807926igjcxj813i3r0x98r"; depends=[BH bigmemory colorspace RColorBrewer Rcpp RcppArmadillo]; }; bigQueryR = derive2 { name="bigQueryR"; version="0.5.0"; sha256="051c8rkj77dm78237dzhf3lcdawv0xv72pwfiim9bi89z9mp6f9m"; depends=[assertthat googleAuthR googleCloudStorageR httr jsonlite]; }; bigReg = derive2 { name="bigReg"; version="0.1.2"; sha256="1hmvh5j40zpzz6c88hmikphps8rb741yvkg60dxmkfl8gxqsrp3w"; depends=[MASS Rcpp RcppArmadillo uuid]; }; - bigalgebra = derive2 { name="bigalgebra"; version="0.8.4.2"; sha256="0xgaks6yx6gh333g27rij28hhxlziknxaqw5cbw1cr7srdl295i9"; depends=[BH bigmemory]; }; biganalytics = derive2 { name="biganalytics"; version="1.1.14"; sha256="1hsqdg5hkhs6z9pwvn055q02hzpksjwrf33q5zdnkm387g188ca6"; depends=[BH biglm bigmemory foreach Rcpp]; }; - bigassertr = derive2 { name="bigassertr"; version="0.1.1"; sha256="0jyycg9qkqswqakbc2p80s7qrv0hm3mn0zwg4v373zcf4z21rvlh"; depends=[]; }; - bigchess = derive2 { name="bigchess"; version="1.5.2"; sha256="021l5pvbh6v95wavxl118k2gvlaadwr18d8f712jzarcnfi1hvy3"; depends=[ff ffbase RSQLite subprocess]; }; + bigassertr = derive2 { name="bigassertr"; version="0.1.2"; sha256="1ibp9kph7xf90sd7d005l4jsfxp37k93x8fwcjq7gcd6sqrzsi7m"; depends=[]; }; + bigchess = derive2 { name="bigchess"; version="1.7.0"; sha256="0zyjkhjmmp1761xwbpp2kayx4j6679mw9c4kxyfz8bl1fw1das31"; depends=[ff ffbase processx RSQLite]; }; bigdatadist = derive2 { name="bigdatadist"; version="1.1"; sha256="16gkybwcp9sxqb0iic2fhmc4gndr44ayg14wrfcjvjaj4g5r6xs2"; depends=[FNN MASS pdist rrcov]; }; bigdist = derive2 { name="bigdist"; version="0.1.4"; sha256="1qfnmhyfadmnnagbhdl4jjrb53i1srszf19idp8fy6bczbjq85yi"; depends=[assertthat bigstatsr furrr proxy]; }; biglars = derive2 { name="biglars"; version="1.0.2"; sha256="17zs25dvlja9ynx2fm5f4nmgkx4mnyqs5iscwsyahr6qigx1rz9x"; depends=[ff]; }; @@ -5496,24 +5498,24 @@ in with self; { bigmatch = derive2 { name="bigmatch"; version="0.6.1"; sha256="1s9i42h82cdp4qqdpw11dmymvrz0f9vj14ibyrlqjkg18lpz0m5y"; depends=[liqueueR mvnfast plyr rcbalance]; }; bigmemory = derive2 { name="bigmemory"; version="4.5.36"; sha256="03pg8mxdc7q0249visjmc8bc3xmwxsfg3i2n6higicj4cfz7zihq"; depends=[BH bigmemory_sri Rcpp]; }; bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; }; - bigml = derive2 { name="bigml"; version="0.1.2"; sha256="0vl5krjbgckknxwl26b2hn63jhb80zbn7abpckhxzxfxzncpnfz9"; depends=[plyr RCurl RJSONIO]; }; bigparallelr = derive2 { name="bigparallelr"; version="0.2.3"; sha256="1xg48zbwhchclc6lc67hc3j1d0b7cajd4whspj68ipm38w8h7l23"; depends=[bigassertr doParallel flock foreach RhpcBLASctl]; }; bigreadr = derive2 { name="bigreadr"; version="0.2.0"; sha256="0d5fgs16kdsl23jqrgz7in63pwhh7bvj7m8pa8nj11v84ji6lagr"; depends=[bigassertr data_table Rcpp]; }; bigrquery = derive2 { name="bigrquery"; version="1.2.0"; sha256="1ggh2gngr5x0g6y7d55y6kvn94anf7qi1bkc28cjmw61hxjq38fb"; depends=[assertthat bit64 curl DBI gargle glue httr jsonlite prettyunits progress rapidjsonr Rcpp rlang tibble]; }; + bigsnpr = derive2 { name="bigsnpr"; version="1.3.0"; sha256="1021nxqpl018ph2np50n02szjdlwc71r6yx5sbszd8dxbpb0hfjn"; depends=[bigassertr bigparallelr bigreadr bigstatsr bigutilsr data_table foreach ggplot2 magrittr Matrix Rcpp RcppArmadillo rmio]; }; bigsplines = derive2 { name="bigsplines"; version="1.1-1"; sha256="1kf04p2lglzdi1fdryk27nmj2a2jca2ii7ki8vak93sq21isb179"; depends=[quadprog]; }; - bigstatsr = derive2 { name="bigstatsr"; version="1.1.2"; sha256="1bp53gbsgxlizv9vq68scbadiq08isvzl0iv9nwa22ywlpaabybf"; depends=[bigassertr bigparallelr bigreadr cowplot foreach ggplot2 Rcpp RcppArmadillo rmio RSpectra tibble]; }; + bigstatsr = derive2 { name="bigstatsr"; version="1.2.3"; sha256="0386hrfjsdnm5ns9kkym8nhzfadcn0shdr3yj77051lwxfngdmbx"; depends=[bigassertr bigparallelr cowplot foreach ggplot2 Rcpp RcppArmadillo rmio RSpectra tibble]; }; bigstep = derive2 { name="bigstep"; version="1.0.3"; sha256="0ygp1vljqqn5vzpjxlv9d6fxxv3bi2kfyqfs1gf0jgxwb9417b82"; depends=[bigmemory magrittr matrixStats R_utils RcppEigen speedglm]; }; bigtabulate = derive2 { name="bigtabulate"; version="1.1.5"; sha256="1jvp3m0ms2cav9z8vvhh80gsa0kvc351brv2jq99rxv1mwvpa4xj"; depends=[BH biganalytics bigmemory Rcpp]; }; bigtcr = derive2 { name="bigtcr"; version="1.1"; sha256="1l03yc28afdm7glbw4ay0zsywjgqg5l90qz1hfhslsy8gg7d5wq5"; depends=[]; }; bigtime = derive2 { name="bigtime"; version="0.1.0"; sha256="136gy2i4qwa2drklllyzp3z0dbijlavgf3sxy73bf84df2yq1c9i"; depends=[corrplot lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; - bigutilsr = derive2 { name="bigutilsr"; version="0.2.2"; sha256="19d4rj598094fncblncd0bampm19srrmczrsmwvj5njf3cxkvxdp"; depends=[bigparallelr nabor Rcpp robust robustbase RSpectra]; }; + bigutilsr = derive2 { name="bigutilsr"; version="0.3.0"; sha256="0fjmczbfap20y39vaym01wxl0c4vckqxgjkki9z1s66rglxr6zg9"; depends=[bigassertr bigparallelr nabor Rcpp robustbase RSpectra]; }; bikeshare14 = derive2 { name="bikeshare14"; version="0.1.2"; sha256="1sib83driqv9k4aa131nw3xasslrxvnxkn3mr8kxycxccky025n9"; depends=[]; }; - bikm1 = derive2 { name="bikm1"; version="0.9.0"; sha256="09ibaj5nd7ql5l30z726nifym5bnmkx4nbw982p9h2440rdx0g5b"; depends=[ade4 ggplot2 gtools pracma reshape2]; }; + bikm1 = derive2 { name="bikm1"; version="1.0.0"; sha256="1pj41d59n3iflwc4iwnwv6g2vhjs9498k85cml7jwb814xpl9jsj"; depends=[ade4 ggplot2 gtools pracma reshape2]; }; bild = derive2 { name="bild"; version="1.1-5"; sha256="03has1zi57inicahl52ja006vv5cdndyxfsxp77l6nc3zc6ixna8"; depends=[]; }; billboard = derive2 { name="billboard"; version="0.1.0"; sha256="1z3y8dijhc1381y91n5zq305xzm1gpvs0g4mdpfr7zrblpa8ws39"; depends=[tibble]; }; billboarder = derive2 { name="billboarder"; version="0.2.8"; sha256="1n51xildr8h3fqm3yhalgvq6pwlpzbcv230jg7skp8147wmwcmi7"; depends=[ggplot2 htmltools htmlwidgets jsonlite magrittr scales shiny]; }; bimetallic = derive2 { name="bimetallic"; version="1.0"; sha256="181qi4dr0zc7x6wziq7jdc1his20jmprfpq3hrfm56fr5n1sj8wl"; depends=[]; }; - bimets = derive2 { name="bimets"; version="1.4.2"; sha256="13gv3p3mldmdwvbvivh4fx8ygmjvf0gza69gprv4z1wphb6rz7yn"; depends=[xts zoo]; }; + bimets = derive2 { name="bimets"; version="1.4.3"; sha256="00gbfjp4gshc5izbjlzsc6vib1rfkilbwd89xc4fn51z1hfsvpzl"; depends=[xts zoo]; }; bimixt = derive2 { name="bimixt"; version="1.0"; sha256="0nhszpzjqy8z3vngl5jdzqxzshnn92wgi0ci5n3n5kzi24xkfrzc"; depends=[pROC]; }; binGroup = derive2 { name="binGroup"; version="2.2-1"; sha256="0cb7j6b0s3y56mv1967awwri0kv0rf3sr3vwf9gc2zbjggxi9ffp"; depends=[partitions Rdpack]; }; binMto = derive2 { name="binMto"; version="0.0-7"; sha256="0rg9rsdy14jx7zjv60krcz1vh0sxqimsai0wynhx2sx0kydw4ngy"; depends=[mvtnorm]; }; @@ -5534,19 +5536,22 @@ in with self; { binom = derive2 { name="binom"; version="1.1-1"; sha256="0mjj92dqf5q69jxzqya4izb1mly3mkydbnmlm4wb3zqqg82a324c"; depends=[]; }; binomSamSize = derive2 { name="binomSamSize"; version="0.1-5"; sha256="1an6dcqsjh5r0w4kc3n6yfvvha5qhrb2i4bpf7g5ykhl3i60zfcc"; depends=[binom]; }; binomialMix = derive2 { name="binomialMix"; version="1.0"; sha256="01l3083bc6k2n18nfi1alc737l5zcankv30f4i0z3ajlqpd2jqr9"; depends=[dplyr gmp lubridate MASS rlang Rmpfr stringr]; }; + binomialRF = derive2 { name="binomialRF"; version="0.0.2"; sha256="08p35kimqjahs1jvcc5znx54j1hfsqiy16m9zkjgpjwsqx2x7dlf"; depends=[data_table ggplot2 randomForest rlist]; }; binomialcftp = derive2 { name="binomialcftp"; version="1.0"; sha256="00c7ymlxk1xnx3x1814x7bcyir7q5sy4rb82dcpzf2bdly4xa1qr"; depends=[]; }; binomlogit = derive2 { name="binomlogit"; version="1.2"; sha256="1njz1g9sciwa8q6h0zd8iw45vg3i1fwcvicj5y8srpk8wqw3qp7k"; depends=[]; }; binostics = derive2 { name="binostics"; version="0.1.2"; sha256="1izcck2dq8ay9ni1wjg426w5rj39gxwzls1sgnngggapl3pmqzz2"; depends=[]; }; + binovisualfields = derive2 { name="binovisualfields"; version="0.1.1"; sha256="0s2p0miqjckkj4v9l0c7zsdnnq69j08p4c5sgdxvkzlv23rnrkyd"; depends=[gtools plotrix shiny]; }; binr = derive2 { name="binr"; version="1.1"; sha256="0kgk91zy7bdrhpkh9c5bi206y9hjwjwzb508i8qqmznqyxmza70r"; depends=[]; }; binseqtest = derive2 { name="binseqtest"; version="1.0.3"; sha256="0661a2bqmv6bckq23c6m04ggwrp8z10lfgjg9dgkz4bfxsd297gs"; depends=[clinfun]; }; - binsmooth = derive2 { name="binsmooth"; version="0.2.1"; sha256="0izfgsjajq64n9x7lv19dscg7z39jspwa9fpvxmyxhiv3d3fz8f0"; depends=[ineq pracma triangle]; }; + binsmooth = derive2 { name="binsmooth"; version="0.2.2"; sha256="1sidv8ra377glaacib1j4ksg5bg759hk7h6fadrfzip3hgxgjg9x"; depends=[ineq pracma triangle]; }; binsreg = derive2 { name="binsreg"; version="0.2.0"; sha256="031a794bkb9qdy51p4jgjg3hvh8ga0hwakcdrjn0hv4ls9f5gsm7"; depends=[ggplot2 sandwich]; }; binst = derive2 { name="binst"; version="0.2.1"; sha256="09kzk7n1j9nzgyijwirzk33z6p6hc67zkd05hv1i9qfijy31gci4"; depends=[rpart]; }; bio_infer = derive2 { name="bio.infer"; version="1.3-3"; sha256="14pdv6yk0sk6v8g9p6bazbp7mr3wmxgfi6p6dj9n77lhqlvjcgm9"; depends=[]; }; bio3d = derive2 { name="bio3d"; version="2.4-1"; sha256="07rw6c2d95gb5myxh31727j0jrchd0xisa3x89jjmf4zzs3vv7v7"; depends=[Rcpp]; }; + bioC_logs = derive2 { name="bioC.logs"; version="1.1"; sha256="18v8hj426vdfz30jifhd17fv65w5nv0f55ff9r8s2ahi6qv3w828"; depends=[]; }; bioOED = derive2 { name="bioOED"; version="0.2.1"; sha256="0wx58bngpzlrbbcnx8l1lqhsg51y98wcym1238p87drf64x2mj1n"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR rlang tidyr tidyselect tidyverse]; }; bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; }; - bioRad = derive2 { name="bioRad"; version="0.4.0"; sha256="100b1fz7dxpvsc452r4yvd4g6gmzz80pvw1l0sp6g4310gyzs2fb"; depends=[curl fields ggmap ggplot2 maptools raster rgdal rhdf5 sp]; }; + bioRad = derive2 { name="bioRad"; version="0.5.0"; sha256="0sqliaqslb0n136fqcw02zc7dbw8rs5p4ayb39msw0ypj0946ync"; depends=[assertthat curl fields ggmap ggplot2 maptools raster rgdal rhdf5 sp tidyr viridis viridisLite]; }; bioacoustics = derive2 { name="bioacoustics"; version="0.2.2"; sha256="13m5w888fap7nxn3pwimi04zdp848n20ha01v7gkzdkchdnbbchb"; depends=[htmltools moments Rcpp stringr tuneR]; }; biocompute = derive2 { name="biocompute"; version="1.0.3"; sha256="1c23yd0vhar1hvzskr7h6g3a78mcrwminm2pkdmc9qlpy8s8smvv"; depends=[cli crayon curl digest httr jsonlite jsonvalidate magrittr rmarkdown stringr uuid yaml]; }; biogas = derive2 { name="biogas"; version="1.23.2"; sha256="05g6nyi872skvr34kw5c71ggnnjc3fv95imc327yjqhmqmwx3m19"; depends=[]; }; @@ -5556,9 +5561,8 @@ in with self; { bioinactivation = derive2 { name="bioinactivation"; version="1.2.3"; sha256="0gz1bbakf6b23jsbvrr8314yxajxcr1akm5srgm883lrf1p5ax13"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS purrr rlang]; }; biolink = derive2 { name="biolink"; version="0.1.6"; sha256="1szsplhzrn660aw442ad73rwhmyqjwqq6faaz4bw86khsvxh993y"; depends=[DBI glue memoise rentrez RMySQL xml2]; }; biomartr = derive2 { name="biomartr"; version="0.9.2"; sha256="12bw15hvjg7fbrq1mwn2xgzbplydy8rlq982hs118mlwdrlqb06q"; depends=[biomaRt Biostrings curl data_table downloader dplyr fs httr jsonlite philentropy purrr R_utils RCurl readr stringr tibble XML]; }; - biomod2 = derive2 { name="biomod2"; version="3.3-7.1"; sha256="0g8knlkrxlwxbh1qzxhv2lf1zxrlqf7s6yhzvch18y8w021d8d9c"; depends=[abind dismo earth gbm ggplot2 MASS mda nnet PresenceAbsence pROC randomForest raster rasterVis reshape rpart sp]; }; + biomod2 = derive2 { name="biomod2"; version="3.4.6"; sha256="0nvxg0a78ynydx3wd16vaildw9x4hiagmx4wkrwkzbyhyi2pgza1"; depends=[abind caret checkmate dismo doParallel dplyr earth ENMeval foreach gbm ggplot2 lattice MASS maxnet mda nnet PresenceAbsence pROC purrr randomForest raster rasterVis reshape rlang rpart sp tidyr]; }; bionetdata = derive2 { name="bionetdata"; version="1.0.1"; sha256="1l362zxgcvxln47b1vc46ad6ww8ibwhqr2myxnz1dnk2a8nj7r2q"; depends=[]; }; - bioplots = derive2 { name="bioplots"; version="0.0.1"; sha256="184wp1jvgf7a80srrfq72a4r1la2psr8b16kxs00v2gcbgjyvr10"; depends=[ggplot2 gplots RColorBrewer reshape2]; }; bios2mds = derive2 { name="bios2mds"; version="1.2.2"; sha256="1avzkbk91b7ifjba5zby5r2yw5mibf2wv05a4nj27gwxfwrr21cd"; depends=[amap cluster e1071 rgl scales]; }; bioset = derive2 { name="bioset"; version="0.2.3"; sha256="15vchim8cim42j1if0jars696rh50vmbggr9748q321f6ngm1w1i"; depends=[dplyr magrittr rlang tibble tidyr]; }; biosignalEMG = derive2 { name="biosignalEMG"; version="2.1.0"; sha256="0bbkrfqkmks4z8c7rh0k43lvm71vn3fzrw3kpj012ym77whwkvay"; depends=[signal]; }; @@ -5576,14 +5580,14 @@ in with self; { biscale = derive2 { name="biscale"; version="0.1.2"; sha256="1m7b1sjqngcfqc5z1b10i3s9m6lml2jiw6ab5dk9dr01i4yw0nhw"; depends=[classInt dplyr ggplot2 glue rlang tidyr]; }; bisect = derive2 { name="bisect"; version="0.9.0"; sha256="1dr95gnc9rb3i8603wspf0hznmvk5akk46nyf1bhv88mjz2i5q77"; depends=[]; }; bisectr = derive2 { name="bisectr"; version="0.1.0"; sha256="1vjsjshvzj66qqzg32rviklqswrb00jyq6vwrywg1hpqhf4kisv7"; depends=[devtools]; }; - bisque = derive2 { name="bisque"; version="1.0.1"; sha256="05rx8fcmb46486iqxgkcf69dih80iwswx41ml1f5d2dnjf5b1p34"; depends=[doRNG foreach itertools mvQuad Rcpp RcppArmadillo RcppEigen]; }; - bit = derive2 { name="bit"; version="1.1-15.1"; sha256="0y351ajlrn9ywbiai46mjpwmw5pqc9ik2z24rf0bnbdcvaxdr7r8"; depends=[]; }; + bisque = derive2 { name="bisque"; version="1.0.2"; sha256="0zp2r1vg29q2ds34hhyjv9pz761mi0qncx9p4ilwnfd5yj9pmzwq"; depends=[foreach itertools mvQuad Rcpp RcppArmadillo RcppEigen]; }; + bit = derive2 { name="bit"; version="1.1-15.2"; sha256="12xjkkkmflkz8s435by4r23b57cz7z67z84907f6qg99hn1yg0qb"; depends=[]; }; bit64 = derive2 { name="bit64"; version="0.9-7"; sha256="07znvz9vp1nz1y5ljng4qyskvm943cdbmy996s67560ijxzsm6kv"; depends=[bit]; }; bitops = derive2 { name="bitops"; version="1.0-6"; sha256="176nr5wpnkavn5z0yy9f7d47l37ndnn2w3gv854xav8nnybi6wwv"; depends=[]; }; bitsqueezr = derive2 { name="bitsqueezr"; version="0.1.1"; sha256="0dy180r9cclq46mh0fzc68p5zm9x2z5pa8ajgsk7qycdkyw5v829"; depends=[]; }; biva = derive2 { name="biva"; version="0.1.0"; sha256="1vppvk2n60hhi7p8y8rdyckmh4yk70wqyhbg7rbgh833s66whypw"; depends=[corrgram rpivotTable shiny shinyAce]; }; bivarRIpower = derive2 { name="bivarRIpower"; version="1.2"; sha256="0vgi0476rwali6k8bkp317jawzq5pf04v75xmycpmadb7drnpzy0"; depends=[]; }; - bivariate = derive2 { name="bivariate"; version="0.4.1"; sha256="13qmwz8lwgxppjsq491f8grsg2myhwma4ikhx2k40lag98dpgc9f"; depends=[barsurf intoo KernSmooth mvtnorm]; }; + bivariate = derive2 { name="bivariate"; version="0.5.0"; sha256="0b8wrzh51wqxiksja4jgjfqfqq3nlnx8vcvnmyhl1nzn9jyzdrfg"; depends=[barsurf intoo KernSmooth mvtnorm]; }; bivgeom = derive2 { name="bivgeom"; version="1.0"; sha256="1cn8k7q011whr4f7zig85dsrkz04614z9ns2ky6k6i16s5n3glxy"; depends=[bbmle copula]; }; bivquant = derive2 { name="bivquant"; version="0.1"; sha256="05dn4qik2dvmgqc2613vddh312bqhza1vnf94an75888gxri5h03"; depends=[copula cubature lpSolve MASS mvtnorm regpro]; }; bivrp = derive2 { name="bivrp"; version="1.2"; sha256="1yrciaadxlkxzbgdsig80yjn9iqrv8a6ccz62hsnyb3knycpcln1"; depends=[MASS mrfDepth]; }; @@ -5596,27 +5600,27 @@ in with self; { blaise = derive2 { name="blaise"; version="1.3.4"; sha256="14jk62sw4xs0yip8gh1w2795l8p0ybv83c24ijizxymg16h7i9g7"; depends=[dplyr readr stringr tibble]; }; blandr = derive2 { name="blandr"; version="0.5.1"; sha256="1rqas71hlf000b3z824d8ljshf8bx91bbrzaxxnx5n3chv19w6z6"; depends=[ggplot2 jmvcore knitr R6 rmarkdown stringr]; }; blastula = derive2 { name="blastula"; version="0.3.1"; sha256="0vanb8ghzskicnk7gw7mw67790lw953jf3jgyyhd71qdgz6wjli7"; depends=[base64enc commonmark curl dplyr fs getPass here htmltools httr jsonlite magrittr mime rlang rmarkdown stringr uuid]; }; - blavaan = derive2 { name="blavaan"; version="0.3-8"; sha256="0sspwr2pfm5an8lg3xwgmq45nxv39yll66bkgk0qjdbfxb2zhzzx"; depends=[bayesplot BH coda future_apply lavaan loo MCMCpack mnormt nonnest2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; + blavaan = derive2 { name="blavaan"; version="0.3-9"; sha256="1a79hvpn1ynd28wj137dmqq6gjxdl7x3ml1mx111vrdlbw8whdmv"; depends=[bayesplot BH coda future_apply lavaan loo MCMCpack mnormt nonnest2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; }; blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; }; blin = derive2 { name="blin"; version="0.0.1"; sha256="1h94azm7gli9i4v3li5c1p36p3rkcj2p5j6rqzlzf0pcqs0bsc09"; depends=[abind glmnet MASS Matrix mvtnorm]; }; - blink = derive2 { name="blink"; version="1.0.0"; sha256="1a1rc4k78604ypgwrb3ysd2ak27vqhbwjn662mrr4a36kgw1z0w3"; depends=[plyr RecordLinkage stringdist]; }; blkbox = derive2 { name="blkbox"; version="1.0"; sha256="14bl0b5w46gb7v8p94df5r56nj849r7jqisajagvd1irda3vkc7z"; depends=[bartMachine caret dplyr e1071 ggplot2 glmnet gtools kknn knitr magrittr nnet pamr party plyr pROC randomForest reshape reshape2 rJava rmarkdown shiny shinyjs stringr tibble tidyr xgboost]; }; blm = derive2 { name="blm"; version="2013.2.4.4"; sha256="1w6c30cq38j4i1q4hjg12l70mhy5viw886l1lsnxyvniy113in4i"; depends=[]; }; blme = derive2 { name="blme"; version="1.0-4"; sha256="1ca2b0248k0fj3lczn9shfjplz1sl4ay4v6djldizp2ch2vwdgy2"; depends=[lme4]; }; blmeco = derive2 { name="blmeco"; version="1.4"; sha256="1370djpy87816bfr0g8730x7q4d4xx9aa41iqm622q5b5zm2jzmp"; depends=[arm lme4 MASS]; }; blob = derive2 { name="blob"; version="1.2.1"; sha256="1slb5mvxfyi92i8ifx2qa31hp57inilwhq1g9lzvgha6jrxbqm7g"; depends=[rlang vctrs]; }; + blockCV = derive2 { name="blockCV"; version="2.1.1"; sha256="0431d38zzkbpri65p5vnr8wc5b27124c4jaj845rgjlkvvb0xysm"; depends=[progress raster sf]; }; blockForest = derive2 { name="blockForest"; version="0.2.4"; sha256="14xggdm34hmdlz3hvvp5layk6mb016yppqf9x9rbia9lmmjbhgfh"; depends=[Matrix Rcpp RcppEigen survival]; }; blockRAR = derive2 { name="blockRAR"; version="1.0.2"; sha256="1d9izlcgz85kcz1sh11mcxq96qh0cwv6638jha851h2f4lnc8aa4"; depends=[arm dplyr ldbounds magrittr tibble]; }; blockTools = derive2 { name="blockTools"; version="0.6-3"; sha256="0023p0msfmp8swq4f5aff40m976np7y051x8hjizzw91hrfa4w2n"; depends=[MASS tibble]; }; blockcluster = derive2 { name="blockcluster"; version="4.4.3"; sha256="0al1v4r26rh4fx4g8gyk8mxfagn75xb9n4lwh3s6xvk87x33p20c"; depends=[Rcpp rtkore]; }; blockmatrix = derive2 { name="blockmatrix"; version="1.0"; sha256="14k69ly4i8pb8z59005kaf5rpv611kk1mk96q6piyn1gz1s6sk6r"; depends=[]; }; - blockmodeling = derive2 { name="blockmodeling"; version="0.3.4"; sha256="11v9903y9dwlzaqp8sx0fsibcg82phvappddy37r8lnxd4vchsd2"; depends=[doParallel doRNG foreach Matrix]; }; + blockmodeling = derive2 { name="blockmodeling"; version="0.3.6"; sha256="12paf76l3wlxad14bkxn37lw9rg6ka473m86wlcf3yhriw8kbaiz"; depends=[Matrix]; }; blockmodels = derive2 { name="blockmodels"; version="1.1.1"; sha256="088629i4g63m8rnqmrv50dgpqbnxd1a4zl5wr3ga0pdpqhmd53wp"; depends=[digest Rcpp RcppArmadillo]; }; blockrand = derive2 { name="blockrand"; version="1.3"; sha256="1090vb26w6s7iqjcal0xbb3qb6p6j46a5w25f1wjdppd1spvh7f9"; depends=[]; }; - blocksdesign = derive2 { name="blocksdesign"; version="3.8"; sha256="1vjx94i3n63hzs9nx0gs9cjc4947lrgq9ld60cxjrdsgk53f53s5"; depends=[lme4 plyr PolynomF]; }; - blogdown = derive2 { name="blogdown"; version="0.17"; sha256="1ijfskdl9apvs95km2f7p2m1imcbxvqxd8wkp3rdmgfs73pfk33r"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; - blorr = derive2 { name="blorr"; version="0.2.1"; sha256="1lvh5jr1jidrkwidpy6plzd58p8q3rxa23wl4xsf8milw180w69p"; depends=[car caret checkmate cli clisymbols crayon dplyr e1071 ggplot2 glue gridExtra magrittr purrr Rcpp rlang scales shiny tibble]; }; + blocksdesign = derive2 { name="blocksdesign"; version="3.9"; sha256="12misnycbfqr5la4h35dx33cs7jxjxrh8cxmsh4pwbw38b6kjc86"; depends=[lme4 plyr PolynomF]; }; + blogdown = derive2 { name="blogdown"; version="0.18"; sha256="10alz3s803pw8yy8c540xfnn86zhvgk7lyx7c3v0q50b64m4arjl"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; + blorr = derive2 { name="blorr"; version="0.2.2"; sha256="1fwpaj4sc4jh4f25zlx8z2gn2gfnj5ibic95rn60iq75mp9r6x44"; depends=[car caret checkmate cli clisymbols crayon dplyr e1071 ggplot2 gridExtra magrittr purrr Rcpp rlang scales tibble xplorerr]; }; blrm = derive2 { name="blrm"; version="1.0-1"; sha256="0p0nmbxil4l89fcryrgsg9mxzb5fyg93p50aqkjy00ms05hwd0hx"; depends=[boot mvtnorm openxlsx reshape2 rjags]; }; blsAPI = derive2 { name="blsAPI"; version="0.2.1"; sha256="0p45g4qqaialh5m9bxgrvnc7nqmm0429syw0bml8h4h8vy4014a7"; depends=[httr rjson]; }; blscrapeR = derive2 { name="blscrapeR"; version="3.2.0"; sha256="0dq9yg9xik715b36vc3fch4ab3njqa22w7b7b905b9gyagkv2zbv"; depends=[dplyr ggplot2 httr jsonlite magrittr purrr stringr tibble]; }; @@ -5632,7 +5636,7 @@ in with self; { bmotif = derive2 { name="bmotif"; version="2.0.0"; sha256="1vvh20hzf2nfc28pp2vjgip3xjv617lawfjawd51v3xmfnk3bvj2"; depends=[gtools Rcpp reshape2 tensor]; }; bmp = derive2 { name="bmp"; version="0.3"; sha256="0jd67r11bn98hjwgyr6gas423787xy7ji2hq7ay80blkkcj91xxx"; depends=[]; }; bmrm = derive2 { name="bmrm"; version="4.1"; sha256="1brdd5mhr5282wkdc62lgsqcxw077p69rknjk7fjcs282ahcik2s"; depends=[LowRankQP lpSolve matrixStats Rcpp]; }; - bnclassify = derive2 { name="bnclassify"; version="0.4.4"; sha256="1jjyqh850glllvghgfbxsji6yw1grzyxm59pcbxkwm3yynviq0ml"; depends=[assertthat BH entropy matrixStats Rcpp rpart]; }; + bnclassify = derive2 { name="bnclassify"; version="0.4.5"; sha256="1ik3n0g6gw7504ryg5skwygyc545150r297gii4mr2zj252lf069"; depends=[assertthat BH entropy matrixStats Rcpp rpart]; }; bnlearn = derive2 { name="bnlearn"; version="4.5"; sha256="0y452cw1dxm1cik4na1zq6g0zv5ybiwc1cq9sdashq1jacjpc158"; depends=[]; }; bnma = derive2 { name="bnma"; version="1.0.0"; sha256="1gaplf5lw7x6nfihk6n0kyf67vx4d8zq6mylhwlmfhpfrpiy030k"; depends=[coda ggplot2 igraph rjags]; }; bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.5"; sha256="1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4"; depends=[pec prodlim Rcpp]; }; @@ -5648,7 +5652,8 @@ in with self; { boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; }; bold = derive2 { name="bold"; version="0.9.0"; sha256="0ppdhbpdffvs0sgh7ykkhr585nhk66w6vqw793wa4ia57yl49s25"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; bomrang = derive2 { name="bomrang"; version="0.7.0"; sha256="0xlsivhnank7bc3y06wk5avlzlc24mfvn9c18rhgxxib8mzf8aak"; depends=[crayon curl data_table dplyr foreign hoardr httr janitor jsonlite lubridate magrittr raster readr rgdal rvest tidyr xml2]; }; - bookdown = derive2 { name="bookdown"; version="0.17"; sha256="10b4gnd6z3w13pysqqan43blxcbk7bgbzc7wr83b23ag1lh2n40j"; depends=[htmltools knitr rmarkdown tinytex xfun]; }; + bookdown = derive2 { name="bookdown"; version="0.18"; sha256="1my6g16phx21v5cvfqcnjibh3zcv02xkix347aafd6a7r3hnxpq5"; depends=[htmltools knitr rmarkdown tinytex xfun]; }; + bookdownplus = derive2 { name="bookdownplus"; version="1.5.8"; sha256="1cdxz5c69cgdk7wxr0xwhzw361rpg7j8xjv9hjf1877qqmhxbrkd"; depends=[bookdown knitr magick xaringan]; }; boostmtree = derive2 { name="boostmtree"; version="1.4.1"; sha256="16adb9akrdw1cfcarrv9l5cxhn1nzskir6nwl9nawl1r727s57z6"; depends=[nlme randomForestSRC]; }; boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; }; boot = derive2 { name="boot"; version="1.3-24"; sha256="0yv0l55kjmlfdx1xhgyjdi0bskxhfal74wr5jxaib1qj99nmkm49"; depends=[]; }; @@ -5667,10 +5672,9 @@ in with self; { bootstrapFP = derive2 { name="bootstrapFP"; version="0.4.3"; sha256="19bsahkxh6g2fjz5j1bdq47vnyy38xd0vr4ahkbjz61x0h8g4nli"; depends=[sampling]; }; boottol = derive2 { name="boottol"; version="2.0"; sha256="01dps9rifzrlfm4lvi7w99phfi87b7khx940kpsr4m9s168a2dzv"; depends=[boot plyr]; }; bor = derive2 { name="bor"; version="0.1.0"; sha256="1r5jacmin0cq9zipxa9nmp3jnh6wsddd4wnzw2n5sggnf24ryp8g"; depends=[]; }; - boral = derive2 { name="boral"; version="1.7"; sha256="0li7jdzgq2ffhrf0nly96syp72vv3c6rbcni19kk2wgyv16mjwcm"; depends=[abind coda fishMod MASS mvtnorm R2jags]; }; + boral = derive2 { name="boral"; version="1.8"; sha256="1m3c58hsm87dpv5z9fqik6d29z3ar5iylgl93qn676xgjli0283x"; depends=[abind coda corpcor fishMod MASS mvtnorm R2jags reshape2]; }; borrowr = derive2 { name="borrowr"; version="0.1.1"; sha256="0q9lkdzf7v9rggrwcny551cx7lfqli60dxqgqx0d2x819d7h0k1d"; depends=[BART mvtnorm Rcpp]; }; - bossMaps = derive2 { name="bossMaps"; version="0.1.0"; sha256="0w4ks1xicvfm8ari4fr18wjm0qj2nxdsapl6lpfjz8l1id0y78cg"; depends=[doParallel foreach ggplot2 raster rgdal rgeos scales sp tidyr]; }; - botor = derive2 { name="botor"; version="0.2.0"; sha256="13lyw6pmz923vdkyaa9n623h134kq0n5gb6qi8bpx8rhq2sycbdb"; depends=[checkmate logger reticulate]; }; + botor = derive2 { name="botor"; version="0.3.0"; sha256="1izhpc491f54p3hz32kcp2b2yxkg59ni1caglyllg22bckw228sg"; depends=[checkmate logger reticulate]; }; boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; }; boxcoxmix = derive2 { name="boxcoxmix"; version="0.21"; sha256="0pav4nksh1zbic11l38jyyq8i58hfvwzkp88ra6nny3jn2axzipl"; depends=[npmlreg qicharts statmod]; }; boxplotdbl = derive2 { name="boxplotdbl"; version="1.3.0"; sha256="1y1b45q69sxbszd83s8ch10z4i55h34ixm8q7yxr7byx3px8y65n"; depends=[]; }; @@ -5680,8 +5684,9 @@ in with self; { bpca = derive2 { name="bpca"; version="1.3-0"; sha256="16a7b94nk5psnm435vrwilcsria9mhr5d31fwzxy53pzp8n78kcr"; depends=[rgl scatterplot3d]; }; bpcp = derive2 { name="bpcp"; version="1.4"; sha256="0jwz9vrz6ivz70qzgvpvksk94rw5m7vi6yijbg8dj6biq5rq01lv"; depends=[ggplot2 survival]; }; bpgmm = derive2 { name="bpgmm"; version="1.0.5"; sha256="0dxyrcf1qyf3ymj36d9flaw8405m7c1cqxbv6yrqm2dhba0ymyxq"; depends=[gtools label_switching MASS mcmcse mvtnorm pgmm Rcpp RcppArmadillo]; }; - bpnreg = derive2 { name="bpnreg"; version="1.0.2"; sha256="0lacfg4qdc3006f9ydxs9x50asdixm12s7ljwzm71a8phcqfimsv"; depends=[BH haven MASS Rcpp RcppArmadillo]; }; + bpnreg = derive2 { name="bpnreg"; version="1.0.3"; sha256="0s1whwi12fs77lycngrm0394cp6cy3g1pikhf670n94y21pk2bvi"; depends=[BH haven MASS Rcpp RcppArmadillo]; }; bpp = derive2 { name="bpp"; version="1.0.0"; sha256="11fgn92vvl7kklv0xdisf8gnf2rbhq11qyckqsxvc5wa821lmnkm"; depends=[mvtnorm]; }; + bqror = derive2 { name="bqror"; version="0.1.0"; sha256="1rgf4m4vh1rfrmsxx8227xm1pdnb1fq5kipdinz9zi99wiw75x2m"; depends=[GIGrvg invgamma MASS NPflow pracma truncnorm]; }; bqtl = derive2 { name="bqtl"; version="1.0-32"; sha256="0jjqgsm9fmvz5nkgz608xfljjpmaf4rs4f7kxvpqn4b1l9s5lhci"; depends=[]; }; braQCA = derive2 { name="braQCA"; version="1.0.0.1"; sha256="1chyy8sk3iqs54sqg79dp1vjz3gcvnbzqbmgasdynir38b45scjh"; depends=[bootstrap dplyr QCA]; }; bracer = derive2 { name="bracer"; version="1.1.1"; sha256="1l722jg88i4898v8fwb9klwl9mbpaz1phypbpqc1j2kp2n2vq0vb"; depends=[stringr]; }; @@ -5697,28 +5702,26 @@ in with self; { brea = derive2 { name="brea"; version="0.2.0"; sha256="0mb043fdhxrg9gyf4g55ydjx37j20394nvd4d0fmiym98lccyi04"; depends=[]; }; breakDown = derive2 { name="breakDown"; version="0.1.6"; sha256="13vcqcrm8h4bwr6rd24z0q0nbx2bpxkg39irhv2aybjg3ll8xq77"; depends=[ggplot2]; }; breakage = derive2 { name="breakage"; version="1.1-1"; sha256="0zjazyz92criiimpz4wyd4hd8ccspvh3hhqpd4qkfdzdf9wp3kns"; depends=[Imap]; }; - breakaway = derive2 { name="breakaway"; version="3.0"; sha256="0y3h7gifv279z3x77jmr97c0i3vy58m5wsr8pa2vyn26m02rbkpc"; depends=[]; }; breakfast = derive2 { name="breakfast"; version="1.0.0"; sha256="0p0svsqphd5w99pf5c5jmak1xxl8md881lapa8aps9xr73m4x6lf"; depends=[plyr]; }; breakpoint = derive2 { name="breakpoint"; version="1.2"; sha256="004vi1qr7iib8ykg6sp7xzv0bb841h4vsz2x0cyrhkdp41frglx9"; depends=[doParallel foreach ggplot2 MASS msm]; }; - breathtestcore = derive2 { name="breathtestcore"; version="0.4.6"; sha256="1d175pwph88nqd3i5nvs4csga9jnlzqxnsimlm63mnbnbxyzbf2q"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; }; + breathtestcore = derive2 { name="breathtestcore"; version="0.5.0"; sha256="1nznzl5bwp5dg82hyx0rkg82glsdzwsdw0fx6hy6pdhfkblbwhz2"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; }; breathteststan = derive2 { name="breathteststan"; version="0.4.7"; sha256="0lvyp3524cha6ckfx2c25829ys1g97xhjc3mi5cmdbfg8zfgcy58"; depends=[BH dplyr purrr Rcpp RcppEigen rstan rstantools StanHeaders stringr tibble tidyr]; }; brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; }; brglm = derive2 { name="brglm"; version="0.6.2"; sha256="0c9ngscc6zlfm90fqyggnj04qfkhp5qgf5q3wnfpxwyc8cm47by2"; depends=[profileModel]; }; - brglm2 = derive2 { name="brglm2"; version="0.6.0"; sha256="1955fqnw97hn9r2q15a06xn80ijbrkfkxjihq91dfj82mb38fqyv"; depends=[enrichwith lpSolveAPI MASS Matrix nnet numDeriv]; }; + brglm2 = derive2 { name="brglm2"; version="0.6.1"; sha256="0p10anckxg0cs2hrj9swvir829kmm9aqwgfrspg4gcrvaxjp1fh6"; depends=[enrichwith lpSolveAPI MASS Matrix nnet numDeriv]; }; bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; }; bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; }; - bridgesampling = derive2 { name="bridgesampling"; version="0.8-1"; sha256="1gjklf88yi6xw0idfm720bdmryhj7dxir211rfl6wk7jsiasxhlh"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; - brinton = derive2 { name="brinton"; version="0.1.3"; sha256="0nirqv0r53873jk0g7ip0n5ll5qasm0jbj2rlk1c7mms5lad9lzy"; depends=[forcats ggplot2 gridExtra lubridate pander qpdf RColorBrewer rmarkdown sm tibble]; }; + bridgesampling = derive2 { name="bridgesampling"; version="1.0-0"; sha256="1awhvv0v42w2q6llqi1wqpaiv5zx74cqzigdsvphy2jfp8ajw64y"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; + brinton = derive2 { name="brinton"; version="0.1.4"; sha256="1vnhxi1wh0525gkiqcvisg0r5zpgdskyzggiqp1f3iiag73b60f5"; depends=[forcats GGally ggplot2 glue gridExtra hexbin lubridate pander RColorBrewer rmarkdown sm tibble]; }; briqr = derive2 { name="briqr"; version="0.1.0"; sha256="073pdk1094ng4kggzdjvihl791r2qlja1j2w3pfmh2027kn520r8"; depends=[dplyr httr jsonlite magrittr tibble]; }; briskaR = derive2 { name="briskaR"; version="0.1.2"; sha256="1y9sabj7pfgyvv6s3bbvrb0xhjhwc4pcfsfx847kqdajid92qx8w"; depends=[deldir fftwtools fields MASS mvtnorm pracma raster rgdal rgeos sp]; }; brlrmr = derive2 { name="brlrmr"; version="0.1.7"; sha256="0s47qz8y416x0gz91pzdpr97pmlvddwkvll454vnlafxxk9p5lds"; depends=[boot brglm MASS profileModel Rcpp]; }; - brm = derive2 { name="brm"; version="1.0"; sha256="0h4kgig28hkqv1amadznc0n9256dx613rxbn8s8si11ygx79x2dd"; depends=[]; }; - brms = derive2 { name="brms"; version="2.11.1"; sha256="1k3b8ax5d7d2m0b9h3hkivj3wfvp3rpq62v2caq1wnk9irxsciab"; depends=[abind backports bayesplot bridgesampling coda future ggplot2 glue loo Matrix matrixStats mgcv nleqslv nlme Rcpp rstan rstantools shinystan]; }; + brms = derive2 { name="brms"; version="2.12.0"; sha256="1699lwkklfhjz7fddawlig552g2zvrc34mqwrzqjgl35r9fm08gs"; depends=[abind backports bayesplot bridgesampling coda future ggplot2 glue loo Matrix matrixStats mgcv nleqslv nlme Rcpp rstan rstantools shinystan]; }; brnn = derive2 { name="brnn"; version="0.8"; sha256="119lxm691ci2bf62jwmbhqsl39xy3jvsi988rr6sdslwaxqyx35b"; depends=[Formula truncnorm]; }; broman = derive2 { name="broman"; version="0.69-5"; sha256="1y1l1p0ddy4a3vwa01yhrc5zcgnl673ar9prkn89pspbdab7km2s"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; - broom = derive2 { name="broom"; version="0.5.3"; sha256="177m249dxbf9pf249610qrl58v025ws41ipfihy66751pwsv2n8d"; depends=[backports dplyr generics nlme purrr reshape2 stringr tibble tidyr]; }; + broom = derive2 { name="broom"; version="0.5.5"; sha256="0n7zd64263kfavdi28rl2bxrsa00c3m4vjhhjdrfwvvmrcxj39fx"; depends=[backports dplyr generics nlme purrr reshape2 stringr tibble tidyr]; }; broom_mixed = derive2 { name="broom.mixed"; version="0.2.4"; sha256="176817l4d31xbi7yfsjlw287va2wjllxizhi5z3p7x5mi7fkyv2c"; depends=[broom coda dplyr nlme plyr purrr reshape2 stringr tibble tidyr TMB]; }; - broomExtra = derive2 { name="broomExtra"; version="1.0.1"; sha256="0jb3s4fzy2s0bnpp8dz1dp1lhnaag18bi7gay738i5bx8f558if8"; depends=[broom broom_mixed dplyr magrittr rlang]; }; + broomExtra = derive2 { name="broomExtra"; version="2.5.0"; sha256="0m00sws1gzwydyyqhddgyzsc71q0z7fmnn4c3mc3yfsd6mgbb2jf"; depends=[broom broom_mixed dplyr magrittr parameters performance rlang tibble]; }; brotli = derive2 { name="brotli"; version="1.2"; sha256="07rgdgxh9bvn0qavpclxmkglwyl6ndqasxcs6j12if698dkn976b"; depends=[]; }; brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; }; brranching = derive2 { name="brranching"; version="0.5.0"; sha256="07dxynk8pbpbsqwaxg9vhpjv4wx8mb1lqxy1nkczjayn1yrpjfm5"; depends=[ape conditionz crul curl phylocomr phytools taxize]; }; @@ -5733,14 +5736,13 @@ in with self; { bsplinePsd = derive2 { name="bsplinePsd"; version="0.6.0"; sha256="0f785l02hiq3f7anxqhm09f7lrqgkkqhly7f1x78cxm22hvrqyhg"; depends=[Rcpp]; }; bsplus = derive2 { name="bsplus"; version="0.1.1"; sha256="0s3407z48b7sdbkjkqcjk2j1wvs0z7chvdjzphil83l0vp3j5x0s"; depends=[glue htmltools lubridate magrittr purrr rmarkdown stringr]; }; bspmma = derive2 { name="bspmma"; version="0.1-2"; sha256="1a3p1h7bks5yrxv791wfa680v4a6q10p59iz6wvfifhf3ndlaw49"; depends=[]; }; - bssm = derive2 { name="bssm"; version="0.1.8-1"; sha256="1754n6cgfnq4q6b0yqbgrkgwnp2ia1pv5xnppqaij2m9gbycrznw"; depends=[BH coda diagis ggplot2 ramcmc Rcpp RcppArmadillo sitmo]; }; - bssn = derive2 { name="bssn"; version="0.7"; sha256="1g2xhb7bqapwd5zbc4bl4h1fskd7k6gd0rz74hnydiiwxrwiihf6"; depends=[sn]; }; + bssm = derive2 { name="bssm"; version="0.1.11"; sha256="05hdpq0zkwg66hj2hv79mp6df85lxm7hw4z1i7crqz7yx6s37dld"; depends=[BH coda diagis ggplot2 ramcmc Rcpp RcppArmadillo sitmo]; }; + bssn = derive2 { name="bssn"; version="1.0"; sha256="1brxbvcvqy8n9xpvp5kz47x5ps8hdqgnh6s49051qaylp95qm432"; depends=[ClusterR mvtnorm sn ssmn]; }; bst = derive2 { name="bst"; version="0.3-17"; sha256="0x7hv0gx5kn8dwgbkabz7d4dh2l75zdawgdj5zxan13k7b9n3l8y"; depends=[doParallel foreach gbm rpart]; }; bsts = derive2 { name="bsts"; version="0.9.2"; sha256="1v32wsjcfcq0zwklrp0c83xw4h49v49nmjs973mdzh4q05wzlpmp"; depends=[Boom BoomSpikeSlab xts zoo]; }; btb = derive2 { name="btb"; version="0.1.30"; sha256="1f94zzpg3q6ldd436cv1wqpfbpw5f706073wk38a4dkg57dwrbgi"; depends=[BH Rcpp RcppArmadillo RcppParallel sf sp]; }; - btergm = derive2 { name="btergm"; version="1.9.4"; sha256="17bjd1d2yj1l98mbflklznxd3q7zi5nzj943nxzva7ij3hdsn6l4"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet_common xergm_common]; }; bucky = derive2 { name="bucky"; version="1.0.6"; sha256="01rlx0m6h66y1p9k5llg17qpajjhk2vmhbpwc4i5igf5x5g4clgc"; depends=[lmtest sandwich]; }; - buildmer = derive2 { name="buildmer"; version="1.4"; sha256="1g18kx525mb9hi8f4msrzqwxsgfxhzpc6yh2q4wn159ca3j0wgs7"; depends=[lme4 mgcv nlme plyr]; }; + buildmer = derive2 { name="buildmer"; version="1.5"; sha256="0m9dz2fb2cwc5l7wnb2dsnqyfkh1ppnlfz9r38ihanav7awsrb17"; depends=[lme4 mgcv nlme plyr]; }; bujar = derive2 { name="bujar"; version="0.2-7"; sha256="1r14mh5j2w87mc6b192hi4qg97si2xv6v826j6c1awh7w3vqbbr9"; depends=[bst earth elasticnet gbm mboost mda modeltools mpath rms survival]; }; bulletcp = derive2 { name="bulletcp"; version="1.0.0"; sha256="1k7lw8gflih47ncz8hgsj0sxbajnkhz1k7yb7rwbdnzcki3n3jln"; depends=[assertthat dplyr mvtnorm Rdpack]; }; bulletr = derive2 { name="bulletr"; version="0.1"; sha256="181rnrp62almf08gr41qnrnq8qnbqraqdvj4zixdh8fachsq2imp"; depends=[dplyr ggplot2 plotly plyr reshape2 robustbase smoother xml2 zoo]; }; @@ -5768,7 +5770,7 @@ in with self; { c14bazAAR = derive2 { name="c14bazAAR"; version="1.2.0"; sha256="0bgf7fa428zp55qnkzhgghrj4hyv2lkhzg8b6msbq3bz2bah7jlz"; depends=[crayon data_table dplyr httr magrittr pbapply rlang tibble tidyr]; }; c212 = derive2 { name="c212"; version="0.95"; sha256="1cgmldy2ysz3934fxh0mmzrb2vw33j3pmws53ng7yxg79mb9ixja"; depends=[coda]; }; c2c = derive2 { name="c2c"; version="0.1.0"; sha256="149np512wjnlr9glmqxpiamf6c31v0bh6ym95jpdhk0iw3ic9kvh"; depends=[]; }; - c3 = derive2 { name="c3"; version="0.2.0"; sha256="1af4lrgck1bff8jjp9vwyw2rpq54d1ng13rpcqlf58asdja29s9h"; depends=[data_table dplyr htmlwidgets jsonlite lazyeval viridis]; }; + c3 = derive2 { name="c3"; version="0.3.0"; sha256="1c2k7ml153bby749qi3a6nckhwwr71mvvps9dkbzkxkwnmlwpz1h"; depends=[data_table dplyr htmlwidgets jsonlite lazyeval viridis]; }; c3net = derive2 { name="c3net"; version="1.1.1"; sha256="0m4nvrs41kmlakc6m203zlncqwgj94wns8kzcb31xngjcacmcq42"; depends=[igraph]; }; cAIC4 = derive2 { name="cAIC4"; version="0.9"; sha256="0imy4kq09an9azqi3aahw3lsmby8km2am0w7fb314xq6ghzf9xmp"; depends=[lme4 Matrix mgcv mvtnorm nlme RLRsim]; }; cIRT = derive2 { name="cIRT"; version="1.3.0"; sha256="0jbjkmzw3z935pq12k5kmy3vdpqlpm70siv8f0bnlw42sai1qcw1"; depends=[Rcpp RcppArmadillo]; }; @@ -5782,7 +5784,7 @@ in with self; { caRamel = derive2 { name="caRamel"; version="1.1"; sha256="06nppjx66xwdqchna5j6xlhfzs5g36nv8srwivbnfixys29awabb"; depends=[geometry]; }; caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; }; caTools = derive2 { name="caTools"; version="1.18.0"; sha256="0y1kgyiy322yhb0phzwvf2zgjz9awp13lhzhk9v1ddg88656jhq3"; depends=[bitops]; }; - cabinets = derive2 { name="cabinets"; version="0.3.1"; sha256="1f6pkh2vpnqdqhbd6ipy5553xh7bppc7y7xbz9lw27wn5fppilzl"; depends=[crayon fs glue here purrr R6 rjson rstudioapi stringr usethis withr]; }; + cabinets = derive2 { name="cabinets"; version="0.4.0"; sha256="1crxr1pxs4if86g405x47709zdyv8fqdmlm2wpilcl2bdcpia0y4"; depends=[crayon fs git2r glue here purrr R6 rjson rstudioapi stringr usethis withr]; }; cabootcrs = derive2 { name="cabootcrs"; version="2.0"; sha256="1a473ca90306brhfrzf5hw6d6v252kd2vfwkvgblwy26jmrrr2km"; depends=[lpSolve]; }; cacIRT = derive2 { name="cacIRT"; version="1.4"; sha256="145j6isqa8yj2nvlqkxagd076zs10ng3n44khi5p4jj77fjc8gh6"; depends=[]; }; caesar = derive2 { name="caesar"; version="1.0.0"; sha256="0z1bb5cmjr97l3h9svy4r4bj58jkmq6kdkip577cvy2xf5q9n410"; depends=[binhf]; }; @@ -5796,18 +5798,18 @@ in with self; { calibrate = derive2 { name="calibrate"; version="1.7.5"; sha256="1s423nr176l2sc66wp7hzgqkv7c2bq8d2bjrrvrrm5qa9y3zdx1k"; depends=[MASS]; }; calibrateBinary = derive2 { name="calibrateBinary"; version="0.1"; sha256="1k6sl4bg05piyczpk6wsva914gcmy8viyz4423gx9i6ddflb7xdb"; depends=[gelnet GPfit kernlab randtoolbox]; }; calibrator = derive2 { name="calibrator"; version="1.2-8"; sha256="1m9g1pmnr6d9jkg5ab0l0cbqfj7kmx7sdmcdqdhn9ifyhhn7812y"; depends=[cubature emulator mvtnorm]; }; - callr = derive2 { name="callr"; version="3.4.1"; sha256="0nyba0knzd44zz2xmr7zd9qh3rny0q8msysxf49843d9rlyv6y70"; depends=[processx R6]; }; + callr = derive2 { name="callr"; version="3.4.2"; sha256="0bdlp0labwyfl36jqslj2g7zmw7zwr58v9gam435kiblhjimb8fc"; depends=[processx R6]; }; calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; calpassapi = derive2 { name="calpassapi"; version="0.0.2"; sha256="0i81ffdfw3m15cfbag3l9s245dyhapqhy7adb3228vam3qp3n59b"; depends=[digest dplyr httr jsonlite stringr]; }; camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; }; camtrapR = derive2 { name="camtrapR"; version="1.2.3"; sha256="0sjniyi36ri0yz2bbhc0f8kwghz3wqcp1hi7sf2fx0y6hg33z6xn"; depends=[data_table overlap secr sp]; }; - cancensus = derive2 { name="cancensus"; version="0.2.0"; sha256="1vggqpv7l472dc889fh2ldsijgwpv9s6ai8jhqhz2q2xdg099v7c"; depends=[digest dplyr httr jsonlite rlang]; }; + cancensus = derive2 { name="cancensus"; version="0.2.1"; sha256="09ck076csz9srz660c1y2lmmvdjk2k14w1bmwizfl5vs3sb1k010"; depends=[digest dplyr httr jsonlite rlang]; }; cancerGI = derive2 { name="cancerGI"; version="1.0.0"; sha256="1chkcyf9m98gbn6b3vmb1baw7kii4g5vxvg2xfi7i6wwdn8sqr65"; depends=[igraph qvalue reshape2 survival systemfit]; }; cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; }; candisc = derive2 { name="candisc"; version="0.8-0"; sha256="0hq5bwvq791rhff2c29xdjbbkcyydii1lbsy05c1fapyn88ir0mi"; depends=[car heplots]; }; canprot = derive2 { name="canprot"; version="0.1.2"; sha256="0lc31vw49sc2zsrn52aqqljcc4n79j4i4845sr201ga67w07vrrb"; depends=[CHNOSZ xtable]; }; - cansim = derive2 { name="cansim"; version="0.3.3"; sha256="17rhhqzs49zhgkhcdi4xq7cgj4hb6900bxvw43nbwqr3gcif1wpq"; depends=[dplyr httr jsonlite purrr readr rlang rvest stringr tibble xml2]; }; - canvasXpress = derive2 { name="canvasXpress"; version="1.26.5"; sha256="0bgba7sz1xd3r8l130m40p0wyiq5mvsww6n5lji3qkiqihzdd0ra"; depends=[htmlwidgets httr]; }; + cansim = derive2 { name="cansim"; version="0.3.5"; sha256="0lqkyq2n8v2y172ihyb9vh3mimrkg2yx2c42cxdaz4p7gqiq7z8r"; depends=[dplyr httr jsonlite purrr readr rlang rvest stringr tibble xml2]; }; + canvasXpress = derive2 { name="canvasXpress"; version="1.27.6"; sha256="0dhfkxmdmk3172pvby6ksysypg5z26byg26ny7wfy7b81rdwhqxk"; depends=[htmlwidgets httr]; }; cap = derive2 { name="cap"; version="1.0"; sha256="1pv8hskxjbp589dn7rx80yaa1ld76x1w37bss2fyrys1p3qr78aa"; depends=[MASS multigroup]; }; caper = derive2 { name="caper"; version="1.0.1"; sha256="0md0sngj7wsv2d4d7fmyyz9qqismk3ps9l3qk1blqz1yi19pq124"; depends=[ape MASS mvtnorm]; }; capitalR = derive2 { name="capitalR"; version="1.3.0"; sha256="08lvncia9mdrnw84zydf1k7336xawiirh2swziqfwx3z1n172n52"; depends=[]; }; @@ -5817,12 +5819,12 @@ in with self; { captr = derive2 { name="captr"; version="0.3.0"; sha256="13j2nq9hm37g4h5fjdpz7kix0sqajdd7zssjfgil06ixfmnsijkx"; depends=[curl jsonlite]; }; capushe = derive2 { name="capushe"; version="1.1.1"; sha256="1aa76ir1kp67hiz7dr60azyc71yzslshyc640fjh0fpw0sp5kwbc"; depends=[MASS]; }; capwire = derive2 { name="capwire"; version="1.1.4"; sha256="18a3dnbgr55yjdk6pd7agmb48lsiqjpd7fm64dr1si6rpgpl4i9c"; depends=[]; }; - car = derive2 { name="car"; version="3.0-6"; sha256="0yv5mwaa0ymrbis9590mx0zcj3w6j4drhs6ab13zhx4zc3x1b7b6"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; + car = derive2 { name="car"; version="3.0-7"; sha256="11sfk1l41j27mrfy16g7b02c570n3gy9icvpcrfjh1biykqa565d"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; carData = derive2 { name="carData"; version="3.0-3"; sha256="0cg2yxzn0pdjqykr60my1fzpfkqac21fll5hv3m9w5c9sayq8swq"; depends=[]; }; carSurv = derive2 { name="carSurv"; version="1.0.0"; sha256="0wv7lp10i4sdfqyizg77ghblp3pcp7wzhs946sm0wl6w00krav9j"; depends=[corpcor fdrtool mboost Rcpp survival]; }; caracas = derive2 { name="caracas"; version="0.0.1"; sha256="1pn6qf6m32psylnw1rnp2pdkwpsa5jz0lhfwj5c0ll23a8ln7627"; depends=[reticulate]; }; carat = derive2 { name="carat"; version="0.1.0"; sha256="09vqcljl74x6qbk88mf9xnp1hwzg1mwvmxi43gmw8qcg13zcfiai"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo stringr]; }; - carbonate = derive2 { name="carbonate"; version="0.1.2"; sha256="1v4ssdk7j60sm4iahywb4x710ijvzj0yczcmr75zvq9rjfki1b54"; depends=[clipr httr magick R6 RSelenium rtweet wdman yaml]; }; + carbonate = derive2 { name="carbonate"; version="0.1.3"; sha256="0y1wjrlh0rbfl1wz9028b637gs20giifp9ykg1yir2ak7fpwbq85"; depends=[clipr details httr magick R6 RSelenium rtweet wdman yaml]; }; carcass = derive2 { name="carcass"; version="1.6"; sha256="0nhp35nxjqqmy15rf9vc0qyymy7d0v8mc84570b9nc62g5xac8xy"; depends=[arm expm lme4 MASS survival]; }; cardidates = derive2 { name="cardidates"; version="0.4.8"; sha256="1mfd5sgzswhs9rln2bgxx8c54z69xp8l5dfmx7jfh8jl43qkzpjf"; depends=[boot lattice pastecs]; }; cardioModel = derive2 { name="cardioModel"; version="1.4"; sha256="1a2nvn4a4zc89pb01m20pxqgbj0ypzzvx9w2vfzwly1kzkhvc9hr"; depends=[lubridate nlme]; }; @@ -5836,7 +5838,7 @@ in with self; { carrier = derive2 { name="carrier"; version="0.1.0"; sha256="0bqnwnnjqjk9q0lxq6kkz9s75ss10lfyyywyyi24m8wppxpw1vqc"; depends=[pryr rlang]; }; cartograflow = derive2 { name="cartograflow"; version="1.0.0"; sha256="1sczhvkkrdhcn2phjpsvb86ik0bgyhbgcza7dz6d4qmpl8195bs9"; depends=[dplyr g_data ggplot2 maptools plotly reshape2 rgdal rgeos rlang sp]; }; cartogram = derive2 { name="cartogram"; version="0.2.0"; sha256="1b6jr6sf821xa2cbm09zmnvvai6azh7p9zhz78a4yqpiwdw122sc"; depends=[packcircles sf]; }; - cartography = derive2 { name="cartography"; version="2.2.1"; sha256="0fbgaaq354j6hg7m9wgpw4z1b26njl4liysb2vzgi3py5n9xg3dp"; depends=[classInt raster Rcpp rgeos rosm sf sp]; }; + cartography = derive2 { name="cartography"; version="2.3.0"; sha256="1xzmkrgsb652r8mdnsk1i34yb7364x8id1vdc9fn62r30cgg3ky0"; depends=[classInt curl png raster Rcpp rgeos sf slippymath sp]; }; cartools = derive2 { name="cartools"; version="0.1.0"; sha256="0gc5502373f0c2m2rh6awvyfqrg1wx1f341dm2byk9znba887lgs"; depends=[animation devtools dplyr gapminder ggplot2 knitr rlist rmarkdown roxygen2 sde shiny tidyverse usethis]; }; carx = derive2 { name="carx"; version="0.7.1"; sha256="1qyqsj6pfzzqyaj6076zvgcimhl4cll6sxfb6aigm02rwfkq5gvh"; depends=[matrixStats mvtnorm nlme tmvtnorm xts zoo]; }; caschrono = derive2 { name="caschrono"; version="2.1"; sha256="0p103r6v37c4li1j9x5mdflhx24zil8nhgpdvw5ijrvyixds0nn2"; depends=[Hmisc zoo]; }; @@ -5854,17 +5856,19 @@ in with self; { catch = derive2 { name="catch"; version="1.0"; sha256="16gdjrmlsnpyc38fihggj6c7wpgpmf4phcwrimnncdhwlk038yn8"; depends=[MASS Matrix tensr]; }; catchr = derive2 { name="catchr"; version="0.2.2"; sha256="02swyg21wd6793nk590lis5bh36lb2mjvv1k05szf22k08vsqv77"; depends=[purrr rlang]; }; catcont = derive2 { name="catcont"; version="0.5.0"; sha256="0ix6ipm3nn9aq5vxirjga2kwwfnxn4v8ggfjlg5v9027v2r8rb96"; depends=[dplyr]; }; - catdap = derive2 { name="catdap"; version="1.3.4"; sha256="0i877l61f6c75pczi235rzci67w29zv1d7z5zn5p5ymndclvlpl2"; depends=[]; }; - catdata = derive2 { name="catdata"; version="1.2.1"; sha256="0fjylb55iw8w9sd3hbg895pzasliy68wcq95mgrh7af116ss637w"; depends=[MASS]; }; + catdap = derive2 { name="catdap"; version="1.3.5"; sha256="0fyhl69z2lznymvpzxra9qvcg85ggzkfjy68c6mzdmf1ja44d2k5"; depends=[]; }; + catdata = derive2 { name="catdata"; version="1.2.2"; sha256="14kx7yi0cv6dyh9wjasb8gn6cp1bhglgwql7dc2a7lqvdcp0d5vj"; depends=[MASS]; }; cate = derive2 { name="cate"; version="1.1"; sha256="1mw4h03gbrrf69jhw3g8a761gxrz2i7aiqdb0vc1dv75pkjspwmj"; depends=[corpcor esaBcv leapp MASS Matrix ruv sva]; }; + categoryEncodings = derive2 { name="categoryEncodings"; version="1.4.3"; sha256="0ns8ml2hm41650bi8yag6w3k9nb2ky43370444cgy3i7ajpzw87w"; depends=[data_table glmnet sparsepca]; }; catenary = derive2 { name="catenary"; version="1.1.2"; sha256="1n64kq3lkaf00a2mghs67hnxvi4dp6g12pwifyx0bd418wkw9wf3"; depends=[boot broom dplyr ggplot2 tidyverse]; }; catfun = derive2 { name="catfun"; version="0.1.4"; sha256="1482rll333fvy4h58f15flfs7qrck3vk9bzpdn3hayhnmc7svmma"; depends=[broom cli DescTools epitools Hmisc magrittr rlang]; }; + cati = derive2 { name="cati"; version="0.99.3"; sha256="0hq6hdzriab380pc0mx6g8xqflqj5mznr4b7fqw2f51kx8ang8hg"; depends=[ade4 ape e1071 FD geometry hypervolume nlme rasterVis vegan]; }; catlearn = derive2 { name="catlearn"; version="0.7.1"; sha256="194gqx94wkl4zr01ms5g684ma328q35cfqpwa63jv98scrybrbwj"; depends=[doParallel dplyr foreach Rcpp tidyr]; }; catmap = derive2 { name="catmap"; version="1.6.4"; sha256="18449qh10jxfi8p49gmbnib5y013nfdgdblbs4n0mfs0nnzb10sx"; depends=[forestplot metafor]; }; - catnet = derive2 { name="catnet"; version="1.15.5"; sha256="1mwhchja3k9mrhclg6janxsjjs4x20ppg3gx6jymfai2bdv23azh"; depends=[]; }; + catnet = derive2 { name="catnet"; version="1.15.7"; sha256="015qh9k0jj5plp777j3kl20601qiwadkaqrdb0483h3gwqwy828g"; depends=[]; }; catseyes = derive2 { name="catseyes"; version="0.2.3"; sha256="1p0jnjjfl1jqqqk8q6yfsxrh30idfbss7v6lrrm25x8zrhxah0ww"; depends=[]; }; catspec = derive2 { name="catspec"; version="0.97"; sha256="1crry0vg2ijahkq9msbkqknljx6vnx2m88bmy34p9vb170g9dbs1"; depends=[]; }; - cattonum = derive2 { name="cattonum"; version="0.0.3"; sha256="03xshvf1yna9i0gbxx1ackq375890lvbkw6pp5zjs0fyidg0fmww"; depends=[dplyr purrr Rcpp rlang tibble tidyselect]; }; + cattonum = derive2 { name="cattonum"; version="0.0.4"; sha256="0w2b1v871vhmsglh2islmr1hjvxinnzaygl1rqpplr21274glj1m"; depends=[dplyr purrr Rcpp rlang tibble tidyselect]; }; causalMGM = derive2 { name="causalMGM"; version="0.1.1"; sha256="13qx71rfc6m7mvlpwma7ks09f3mlxknxw3jlv3b4iq5pjs8f1v5r"; depends=[rJava]; }; causaldrf = derive2 { name="causaldrf"; version="0.3"; sha256="16gqx8b8alwm8a4lm69qamnqr3bg2qbz0d6q4lyqyrwsk12grid6"; depends=[mgcv survey]; }; causaleffect = derive2 { name="causaleffect"; version="1.3.10"; sha256="0z7vdhm9g95s9nkyx4jdzqrap24nb63n8mr23b9gqm6s1m47sc0z"; depends=[ggm igraph XML]; }; @@ -5878,7 +5882,7 @@ in with self; { cblasr = derive2 { name="cblasr"; version="1.0.0"; sha256="1bz8d4124qpja4bvzn6k1swi89cfyrcpwg2nwyj4r8y0m1hbpc71"; depends=[Rcpp]; }; cbq = derive2 { name="cbq"; version="0.1.0.0"; sha256="1h02pf0jb5qg1ww9phmm3m49ix2qgvk7kyyav6923vp1hn5y5hbj"; depends=[BH Formula Rcpp RcppEigen rstan StanHeaders]; }; cbsem = derive2 { name="cbsem"; version="1.0.0"; sha256="0gc14rhfy566yw2yqzq7yk0xanpzcz7zp3km483azgk816vakbn4"; depends=[]; }; - cbsodataR = derive2 { name="cbsodataR"; version="0.3.5"; sha256="1j0v360q5vwl4xqzd35glwilcz8hv6kh4kky19zkzckkj4qqzidi"; depends=[jsonlite whisker]; }; + cbsodataR = derive2 { name="cbsodataR"; version="0.4.1"; sha256="1nrkh2505xkpdrvs1wlibp8md0qvlpknwiydiiqn216ipzjyp8p7"; depends=[jsonlite whisker]; }; ccChooser = derive2 { name="ccChooser"; version="0.2.6"; sha256="1vgp4zhg46hcf9ma2cmwgnfrqkmq1arh0ahyzjpfk3817vh7disc"; depends=[cluster]; }; ccRemover = derive2 { name="ccRemover"; version="1.0.4"; sha256="1npd0vx2hyg7qbwd650987i49v5cxr6i1hlj5rw6fxc0b808s596"; depends=[]; }; ccaPP = derive2 { name="ccaPP"; version="0.3.3"; sha256="1p08gih67950khfkzhiksa8qw2f9mrmyqiiapsjpv6zc5g0lchhk"; depends=[pcaPP Rcpp RcppArmadillo robustbase]; }; @@ -5888,15 +5892,15 @@ in with self; { cccrm = derive2 { name="cccrm"; version="1.2.1"; sha256="180hzxm4z91hh008lysq1f0zky7qngg5z1laa1c119g4rqqcdskl"; depends=[gdata nlme]; }; ccda = derive2 { name="ccda"; version="1.1.1"; sha256="1kka4vmhpcnl4skdmijzsxrfj6dgax6hhlxvp7gkqlfaazq8pzf0"; depends=[MASS]; }; ccdrAlgorithm = derive2 { name="ccdrAlgorithm"; version="0.0.5"; sha256="171k70p4qyasr385ma3cvcga2b4nbz2dfry78wqx5yb1aa6wwcyc"; depends=[Rcpp sparsebnUtils]; }; - ccfa = derive2 { name="ccfa"; version="1.1.0"; sha256="1paxk1jkkl8yy71h8zqw7kmhy5yz93sp7z9mpnckwyxmsbs58ps8"; depends=[BMisc doParallel foreach formula_tools ggplot2 pbapply quantreg TempleMetrics tidyr]; }; cchs = derive2 { name="cchs"; version="0.4.1"; sha256="1aq6mc3hyhp3g8yzk6y82zz8nriwmxms9lgpw06rf857im6bn5ls"; depends=[survival]; }; + cchsflow = derive2 { name="cchsflow"; version="1.3.2"; sha256="0rri4566jrzhbyp4azqayzdrdkpcgqq236cg4nrskwqb2bys3ifb"; depends=[dplyr haven magrittr sjlabelled stringr]; }; cclust = derive2 { name="cclust"; version="0.6-21"; sha256="1n5hh0017bcq8ck52qq89jm9zgdfpmiksrypsnv2vvhk3nr0s91c"; depends=[]; }; ccmm = derive2 { name="ccmm"; version="1.0"; sha256="0855nr74xxpy7in2vrw15g8pv7nm1374irc1c5hikr5hadk5pf8v"; depends=[MASS]; }; ccostr = derive2 { name="ccostr"; version="0.1.0"; sha256="0yfmj8v7ip595v87w9dmlzl5rih2j0lsapswh9b9vvc20wnk48ld"; depends=[data_table dplyr forcats ggplot2 knitr msm Rdpack rlang survival tibble]; }; ccrs = derive2 { name="ccrs"; version="0.1.0"; sha256="1nyw4ip9v7y6yfbfdz3bwhy4r6hpp1hiip3ycldxlkl9wrxkxgrw"; depends=[cds colorspace dplyr limSolve lsbclust msm]; }; ccss = derive2 { name="ccss"; version="1.0"; sha256="0m2facn6kwxrjxg9a8z0pjnhp0rkgw6nxj6sac93ig24zygx4380"; depends=[]; }; cctools = derive2 { name="cctools"; version="0.1.2"; sha256="03lp9pa9qr2hi584ivvmswxmwjw1c3a6xqladpqldjhzvzpxvcwi"; depends=[qrng Rcpp RcppArmadillo]; }; - cdata = derive2 { name="cdata"; version="1.1.5"; sha256="1ls1hc455j48rv7l5nh4dqpi27r4gnm65w7yd70m226h0ch6hsjb"; depends=[rqdatatable rquery wrapr]; }; + cdata = derive2 { name="cdata"; version="1.1.6"; sha256="06a5bj9nzafp6aamvnjij6xf7flqp2b01rpmir9chg05rvkjhb2b"; depends=[rqdatatable rquery wrapr]; }; cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; }; cdcfluview = derive2 { name="cdcfluview"; version="0.9.0"; sha256="0i6jipzpfcqs48w0cwjyynf3lpdppa7xh27q1rwv3jsqd246880v"; depends=[dplyr httr jsonlite MMWRweek purrr readr sf units xml2]; }; cdcsis = derive2 { name="cdcsis"; version="2.0.3"; sha256="0hv52valyig3zzywm3058c5nxb2n7y3j2vfibxdbfg8414wwapd9"; depends=[ks mvtnorm Rcpp]; }; @@ -5904,6 +5908,7 @@ in with self; { cder = derive2 { name="cder"; version="0.2-2"; sha256="0aw2c170sqx2y4iz16avqijahwxlsaz590mxvsx4bicfd8nrcynk"; depends=[curl dplyr glue lubridate readr rlang stringr tibble]; }; cdfquantreg = derive2 { name="cdfquantreg"; version="1.2.2"; sha256="094mk2hvxww2lndx5wkw368ynqx6klbdwl30d1yv7kqmr2yy7388"; depends=[Formula MASS pracma]; }; cdlTools = derive2 { name="cdlTools"; version="0.14"; sha256="0zf00y8qcklz2yp7vx6mjvx2h2p4kq44r51z4qy88kq9v62rqz3k"; depends=[httr raster]; }; + cdlei = derive2 { name="cdlei"; version="1.0"; sha256="1zsgryrwr1nqhcyizrh67lm953b87ih9l4rvc6i59s4vg2ph1ph1"; depends=[]; }; cdom = derive2 { name="cdom"; version="0.1.0"; sha256="00xqqqhskjlkz8ii7kqyabxk8995w7g9jiz1isyqjpwg8nsa3x28"; depends=[broom ggplot2 minpack_lm tidyr]; }; cdparcoord = derive2 { name="cdparcoord"; version="1.0.1"; sha256="0ym2ypw4bsvmx9q4vskrq4pdd92y47vs8pay8san40rgzwqr2agb"; depends=[data_table freqparcoord partools plotly]; }; cds = derive2 { name="cds"; version="1.0.3"; sha256="1h34k96h7ajkaqsw4dlqri63hrbnshaqwrdl74wlgycdlbvrqj05"; depends=[clue colorspace copula limSolve MASS]; }; @@ -5936,8 +5941,9 @@ in with self; { ceramic = derive2 { name="ceramic"; version="0.6.0"; sha256="0n0l1b7gb05kqjrh696faq868q3nbwlg34y6wgr0w205kdq6qs17"; depends=[curl dplyr fs glue jpeg magrittr png purrr rappdirs raster reproj rlang slippymath sp spex tibble]; }; cernn = derive2 { name="cernn"; version="0.1"; sha256="0gz2x20pgsiq85hwkkpg4s1cdlw9plygx0446djc7qsymp469p2w"; depends=[]; }; cetcolor = derive2 { name="cetcolor"; version="0.2.0"; sha256="0kygdcr9ldanr0z4qpygwh0padki7s2ad0j6myky601g4228z79q"; depends=[]; }; - ceterisParibus = derive2 { name="ceterisParibus"; version="0.3.1"; sha256="1vysa4yq5qjvhpl0x3snaqa45ywsn8hhpnc657v02kvvzlgx508j"; depends=[DALEX ggplot2 gower knitr]; }; + ceterisParibus = derive2 { name="ceterisParibus"; version="0.4.1"; sha256="1dyb7962kgb3i6iz0skjn41xm08yh1r9j76bppbjnlzrdycyfcmf"; depends=[DALEX ggplot2 gower knitr]; }; cfa = derive2 { name="cfa"; version="0.10-0"; sha256="12z58y4ls9m58wpj1xa4ir2p2apzxaskps05sxy2946m24i71zfk"; depends=[]; }; + cfdecomp = derive2 { name="cfdecomp"; version="0.1.0"; sha256="1cgm55z05ksd1zga8qhk8z2cskaxgs9rbm0nnz9wyphaq42vsiq6"; depends=[]; }; cffdrs = derive2 { name="cffdrs"; version="1.8.6"; sha256="1acj27ip4grrji5zyx7hv5b6x3bx87f29id9rnn19gj35mj5a9fl"; depends=[data_table doParallel foreach geosphere raster rgdal spatial_tools]; }; cfma = derive2 { name="cfma"; version="1.0"; sha256="006z5g3rqpg44jqdf6ivyxr47sxm5cd9cqhayfi8qk73xx5w4lv9"; depends=[]; }; cg = derive2 { name="cg"; version="1.0-3"; sha256="1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3"; depends=[Hmisc lattice MASS multcomp nlme rms survival VGAM]; }; @@ -5948,8 +5954,8 @@ in with self; { cghRA = derive2 { name="cghRA"; version="1.6.0"; sha256="16dlw27s8wckc75xcwc2g74pw6bar0y0ii3h53w1hql05d4f7sb8"; depends=[DNAcopy Rgb]; }; cglasso = derive2 { name="cglasso"; version="1.1.1"; sha256="0d3r6jxrh1z4qnpxcfvwd7bcayzya2dhfl3hpfqd2dzm8fwwc2lf"; depends=[igraph MASS]; }; cglm = derive2 { name="cglm"; version="1.1"; sha256="1r3wrds5lbirzzqsi12prwykxa5361jb95pq7j95nlp6y8kcb94j"; depends=[data_table nleqslv Rcpp RcppArmadillo]; }; - cgmanalysis = derive2 { name="cgmanalysis"; version="2.5"; sha256="0mpdd56zhvdlwl305752ivmabmlqb2pkayqrscraq7kshb3fm8cr"; depends=[ggplot2 lubridate pastecs pracma readr readxl zoo]; }; - cgraph = derive2 { name="cgraph"; version="5.0.1"; sha256="14x0q2353kfd66788amxydayqigrhfgdkf9i6rcliwc0cx9hqcck"; depends=[]; }; + cgmanalysis = derive2 { name="cgmanalysis"; version="2.6.1"; sha256="0jrsn5i04gaxkcgjyrmlpx66gw27smq7r0s2v1j7hfd15q875sz6"; depends=[ggplot2 lubridate pastecs pracma readr readxl XML zoo]; }; + cgraph = derive2 { name="cgraph"; version="6.0.1"; sha256="0hmp07iz7ya3j8jaghm4pa0b84lsinc48rsibbh47sd3i6pkxfik"; depends=[]; }; cgwtools = derive2 { name="cgwtools"; version="3.0.1"; sha256="15qllfcgls6hpj51xa7mklr5ppxrs2avbiwq3y4bqbb20fld78w3"; depends=[]; }; chandwich = derive2 { name="chandwich"; version="1.1.2"; sha256="196k13qg9kl94yki989ncx2mrvvj82vv8mi453s8lqmv9s875841"; depends=[numDeriv]; }; changedetection = derive2 { name="changedetection"; version="0.2.0"; sha256="0j8x7qyna7qgjhx56yxav1g3wj3r47zvx2hivybsjis2gqbl82hr"; depends=[glmnet L1pack Rdpack]; }; @@ -5965,15 +5971,17 @@ in with self; { chebpol = derive2 { name="chebpol"; version="2.1-2"; sha256="126cgqnl9jy332q0ywg9dr11d4q1aichwwakb1xcrxrqw2j26zzi"; depends=[geometry]; }; checkLuhn = derive2 { name="checkLuhn"; version="1.1.0"; sha256="1s1ix5n98bcbzcvrz5h19sk9pchdvrhpy3ppmw96ys8vylzm58mv"; depends=[dplyr stringr]; }; checkarg = derive2 { name="checkarg"; version="0.1.0"; sha256="0rkdjs2c4yx9laqgayxz57bwxhwgdh6ndrr4i3b1kh31lcmk1xc6"; depends=[]; }; - checkmate = derive2 { name="checkmate"; version="1.9.4"; sha256="08ddpgs4mv5d5y4j054pm8drmxkn7yvhfpbghwxlizjpnxa5g8ps"; depends=[backports]; }; - checkpoint = derive2 { name="checkpoint"; version="0.4.8"; sha256="0j5z6kmpfns8i28bkdbmwcmbv8cxmfws9d57kv3g1g3km2fmiwcl"; depends=[]; }; + checkdown = derive2 { name="checkdown"; version="0.0.2"; sha256="0615ra1zy8a4vqgiivmqhv4v61vms84pcq8y3vsf5xji3glpilxi"; depends=[knitr markdown]; }; + checkmate = derive2 { name="checkmate"; version="2.0.0"; sha256="193gkifr9spp0x0rwnjq1spdhjkfkh4mv27iklskcj604075phhd"; depends=[backports]; }; + checkpoint = derive2 { name="checkpoint"; version="0.4.9"; sha256="0kwbfkk3zm60w993gvwxxrikbxjdw4sgjrs9h18v3yw19kw1q9m5"; depends=[]; }; checkr = derive2 { name="checkr"; version="0.5.0"; sha256="14hkpfbw5ibdwz2jygir2f2bb2qgrj62gn3449n4dif31nswaj2f"; depends=[err]; }; - cheese = derive2 { name="cheese"; version="0.0.2"; sha256="08947y0zh3kp4ggvbrv7rl5rgj3yhmdwpbbkg8vd0hmbyz8vycc0"; depends=[dplyr forcats kableExtra knitr magrittr purrr rlang stringr tibble tidyr tidyselect]; }; + cheddar = derive2 { name="cheddar"; version="0.1-636"; sha256="1lf39v0p583jgiyb02vx0rgbwzmmhgkfpwjib2fzh9ffbs8bfk66"; depends=[]; }; + cheese = derive2 { name="cheese"; version="0.0.3"; sha256="0li828ijwgiggn80s3y1x6d7nblifzhc05biln9knvg2g3d22ca7"; depends=[dplyr forcats kableExtra knitr magrittr purrr rlang stringr tibble tidyr tidyselect]; }; chemCal = derive2 { name="chemCal"; version="0.2.1"; sha256="1kq82x57qm68im6lyqjqmh4p34s4y7fn5v6ymclxjr47mdv8npb5"; depends=[]; }; chemmodlab = derive2 { name="chemmodlab"; version="1.0.0"; sha256="0lzibshhfz52m61xldf0xq4cc1xx64fjlw18hlkiv65dj3gcj2mh"; depends=[caret class e1071 elasticnet foreach lars MASS nnet pls pROC randomForest rpart tree]; }; chemometrics = derive2 { name="chemometrics"; version="1.4.2"; sha256="0shqns0n964pfwnd0q5sadglrlpgs4g5fbv45fsj9p37l4pq61dp"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; }; cherry = derive2 { name="cherry"; version="0.6-13"; sha256="1bpahdymkc2w6mc5pjyq4q59iwzskw37swx3sw4rnbmnhzhwaf8n"; depends=[bitops hommel lpSolve Matrix]; }; - chest = derive2 { name="chest"; version="0.2.0"; sha256="1p5ggkx73k1ji40y94sbihwh05lbwy6pb060nf3spx0vfs0y8q4m"; depends=[broom forestplot MASS scales speedglm survival tibble tidyselect tidyverse]; }; + chest = derive2 { name="chest"; version="0.3.1"; sha256="0m37x5jqlpfr3gbfc3yacwv2aqzcszjxrav7janxsckpxngxrarb"; depends=[broom dplyr forestplot ggplot2 magrittr MASS speedglm survival tibble]; }; chi = derive2 { name="chi"; version="0.1"; sha256="1y91mwahj4j2wz0y5k5vdpq7ygq834h8jkn37n74lqnwvv1968rr"; depends=[]; }; chi2x3way = derive2 { name="chi2x3way"; version="1.1"; sha256="13qc8sigiw4gcxk8y50q7yfgzbssjyl41fizzjqzcp3p14kpsmzw"; depends=[]; }; chicane = derive2 { name="chicane"; version="0.1.1"; sha256="1d2rvaxdcambawf8l4sn566nr3s8xgf8nfpqa5n6lazvik8vb7kb"; depends=[data_table doParallel foreach gamlss gamlss_tr iterators MASS]; }; @@ -5985,9 +5993,9 @@ in with self; { chinese_misc = derive2 { name="chinese.misc"; version="0.2.1"; sha256="17sffxjpga8mq8xfxhas9jqj71bb80ayz4m2dgnmg1w6bb3p7bsp"; depends=[jiebaR Matrix NLP purrr slam stringi tm]; }; chipPCR = derive2 { name="chipPCR"; version="0.0.8-10"; sha256="1mff7n7ga4sfwvcq7zkjkrl68nybnm2zkn37hmxvnw9yl3ls9lnw"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; chisq_posthoc_test = derive2 { name="chisq.posthoc.test"; version="0.1.2"; sha256="0lvj3jqhaj1ijjpzvpq3fn3a1y3fgv69pxh91j6k958pn6vmp40i"; depends=[]; }; - chk = derive2 { name="chk"; version="0.3.0"; sha256="1s819nkcyfipa2fz684850xv4hh6x4iph6dyxd6xrfxx7mi5vvw8"; depends=[lifecycle rlang]; }; + chk = derive2 { name="chk"; version="0.4.0"; sha256="0d7vjbz8s77r3s8i78bgzb7vgni0ryr9jh0h5nr20aqig68dr82k"; depends=[lifecycle rlang]; }; chlorpromazineR = derive2 { name="chlorpromazineR"; version="0.1.2"; sha256="0zg3xjq67na98n4amsm5v4cn9ba1k7c0lb7k2lvxa3n1w7rndpw3"; depends=[]; }; - chngpt = derive2 { name="chngpt"; version="2019.11-30"; sha256="1yw6hsshpsavmx3v1ndh4b0crr8wsak8h1vbv5qrbj3g1jzazrx7"; depends=[boot kyotil MASS survival]; }; + chngpt = derive2 { name="chngpt"; version="2020.2-26"; sha256="103fwjxm1z9k9l7nw8ckj8zjwlk9dkqrk58gn8hpzd44rxv1476c"; depends=[boot kyotil MASS survival]; }; choiceDes = derive2 { name="choiceDes"; version="0.9-3"; sha256="1nsc8p4svfc6z7ckffl24c0acnaxi6cnpz7jq03vzn6spxvpjcmw"; depends=[AlgDesign]; }; cholera = derive2 { name="cholera"; version="0.7.0"; sha256="0ja013k431vd0sjy74y2mlrii46rbwb5x886jaza4ihb48mgz7ah"; depends=[deldir ggplot2 HistData igraph KernSmooth pracma RColorBrewer sp threejs TSP]; }; choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; }; @@ -5996,22 +6004,22 @@ in with self; { choroplethr = derive2 { name="choroplethr"; version="3.6.3"; sha256="0m6kyrgnv5s1q2ncc63rfxcwqdqx5adqk14q57ss4r84i14dm5yb"; depends=[acs dplyr ggmap ggplot2 gridExtra Hmisc R6 RgoogleMaps stringr tigris WDI]; }; choroplethrAdmin1 = derive2 { name="choroplethrAdmin1"; version="1.1.1"; sha256="13ljs21hdhiv6n4napmk1gjnjhpll6j5wyijzv4xnnbi1y3ns7a9"; depends=[ggplot2]; }; choroplethrMaps = derive2 { name="choroplethrMaps"; version="1.0.1"; sha256="0ghqb2d1h0qkbcsll6ck2qk5sfvdwsrlh3phlbsjbak30832j7fr"; depends=[]; }; - chorrrds = derive2 { name="chorrrds"; version="0.1.9.2"; sha256="0g999i5nlxhbjcnx3kfv4qzd16ybj0da5bwkkn0bsb9qbp8s7lll"; depends=[dplyr forcats magrittr purrr stringr XML zoo]; }; + chorrrds = derive2 { name="chorrrds"; version="0.1.9.4"; sha256="1sdj2x6qiqp787v1xzwixjaidi2pyg42snrrkyhmnflfksgdbmys"; depends=[dplyr forcats magrittr purrr rvest stringr xml2]; }; christmas = derive2 { name="christmas"; version="1.0.0"; sha256="06a2r56vh7m6j0kfbf3b3aapn52x693fzdn29sxfvyackdk5dhj3"; depends=[animation]; }; chromer = derive2 { name="chromer"; version="0.1"; sha256="0fzl2ahvzyylrh4247w9yjmwib42q96iyhdlldchj97sld66c817"; depends=[data_table dplyr httr]; }; chromoMap = derive2 { name="chromoMap"; version="0.2"; sha256="1ljjwkv7rdy1mcrkb8dd5lfkg54gxzclsjvla4qnc8j5hmfp0p8g"; depends=[htmltools htmlwidgets]; }; chromoR = derive2 { name="chromoR"; version="1.0"; sha256="1x11byr6i89sdk405h6jd2rbvgwrcvqvb112bndv2rh9jnrvcw4z"; depends=[gdata haarfisz]; }; - chron = derive2 { name="chron"; version="2.3-54"; sha256="0vc7dxqwx0jqzwszax6di3091npsxnhnbvr7sy7rlip0jqzarwqd"; depends=[]; }; - chronosphere = derive2 { name="chronosphere"; version="0.2.0"; sha256="0c1qahgjnnncckyizdrpsxywq5120xflv9cgwdwhypgda3r05kql"; depends=[raster sp]; }; + chron = derive2 { name="chron"; version="2.3-55"; sha256="09gbs7c1ynlg0kl1m6nkbn75ysk16g13r17snnaws64qwywiywqg"; depends=[]; }; + chronosphere = derive2 { name="chronosphere"; version="0.2.2"; sha256="11vc7ids362jm1xd4z4mfmjbpsxw8wmjnn26ivy7n42xlqqzzpnf"; depends=[raster sp]; }; chunkR = derive2 { name="chunkR"; version="1.1.1"; sha256="1kw3hsx5k4cdicx0hc1v0mf2nzvqg95shx2xv05vb2pass48qw48"; depends=[Rcpp]; }; - chunked = derive2 { name="chunked"; version="0.4"; sha256="0pqk6nnxxnlsw9zal62ajjalrlmvkdrzyz2l8r10jd7s61vhra40"; depends=[DBI dplyr LaF lazyeval]; }; + chunked = derive2 { name="chunked"; version="0.4.1"; sha256="1cxhk28fn4bbwbaijggxkm7qyjnic7ky0s9c4zmd87hfibi8w4v5"; depends=[DBI dplyr LaF rlang]; }; ciTools = derive2 { name="ciTools"; version="0.5.1"; sha256="02jgi09vkzsan47mvg65ciqc1q4vmrl14v2i5bsaqxbvxwd65lww"; depends=[arm boot dplyr lme4 magrittr MASS survival tibble]; }; + cicerone = derive2 { name="cicerone"; version="1.0.1"; sha256="02dzd82vldn1k5i0j8kw1pp1jwakqnsvd1k88czh3qqfaa4wsrq5"; depends=[assertthat R6 shiny]; }; cifti = derive2 { name="cifti"; version="0.4.5"; sha256="092334lcpkzv52bg53hzx64dnrwq67f3p9fzwchmafx1l46xrqx9"; depends=[gifti oro_nifti R_utils xml2]; }; cimir = derive2 { name="cimir"; version="0.4-0"; sha256="0sp8hd354hnrmbyn3gm2sgvkf32n7kqpg9bc56583ibyfc8s4gwm"; depends=[curl dplyr glue jsonlite purrr rlang stringr tidyr]; }; cin = derive2 { name="cin"; version="0.1"; sha256="1pwvy5nh5nrnysfqrzllb9fcrpddqg02c7iw3w9fij2h8s2v6kq5"; depends=[]; }; cinterpolate = derive2 { name="cinterpolate"; version="1.0.0"; sha256="1aw6hs41xin2hhgmi4pr5510v4sn6x735lachpc5gpbxch5h3f82"; depends=[]; }; cir = derive2 { name="cir"; version="2.0.0"; sha256="0ycjnbikpyhcfdik7c5knw4s9gl8y5h4219c4fhs4axs04np004v"; depends=[]; }; - circglmbayes = derive2 { name="circglmbayes"; version="1.2.3"; sha256="1a60d8jpvwx2qwmy2if60c5vni9hp73fdwgz7mwi5xd5l67zwd3h"; depends=[BH coda ggplot2 Rcpp RcppArmadillo reshape2 shiny]; }; circlize = derive2 { name="circlize"; version="0.4.8"; sha256="0jvr9hmxyhg0zx101iiqkrg8wfaj86kp62xpv42n2j9fkn5r1mi2"; depends=[colorspace GlobalOptions shape]; }; circular = derive2 { name="circular"; version="0.4-93"; sha256="0hki85rs8wc5950pjaw28q54rly2napfbcrx3pchlfap6wwy5kkn"; depends=[boot mvtnorm]; }; circumplex = derive2 { name="circumplex"; version="0.3.5"; sha256="1qbh1piwbbwri3m3b00n4rlicmihfivsqq7gh02vqw01fckg60sl"; depends=[assertthat boot dplyr ggforce ggplot2 glue htmlTable magrittr purrr Rcpp RcppArmadillo rlang tibble tidyr]; }; @@ -6021,45 +6029,45 @@ in with self; { citecorp = derive2 { name="citecorp"; version="0.2.2"; sha256="1a5hw9xaa84n847rb8a317svhya1dpfbb79sabaw6m6db4nagm6z"; depends=[crul data_table fauxpas jsonlite]; }; citr = derive2 { name="citr"; version="0.3.2"; sha256="1qbarvafjb8jgkrnrhh6jw7mcglmjwf7dpdiibxf39jkmlhf7las"; depends=[assertthat curl httr miniUI RefManageR rstudioapi shiny shinyjs yaml]; }; ciuupi = derive2 { name="ciuupi"; version="1.1.0"; sha256="0czfmmf62p1vml24s87pdwv52spqycchpkqzwk8vyd4n1z27r5s2"; depends=[functional nloptr pracma statmod]; }; - civis = derive2 { name="civis"; version="2.1.0"; sha256="0bpm42q243ghq03x9vajs0yjdhy4lgn7fqndc53172inmkxwp7dy"; depends=[future httr jsonlite memoise]; }; + civis = derive2 { name="civis"; version="2.1.2"; sha256="085cy1icqn78vimkjv2zdd5m1qf47qj9hl8vkpd29a948nkiv9xf"; depends=[future httr jsonlite memoise]; }; cjoint = derive2 { name="cjoint"; version="2.1.0"; sha256="1bs380ji9vsc1d77wqhl0ij9xblww3g9x3hiwpcpz26wihqcx7ac"; depends=[DT ggplot2 lmtest Matrix sandwich shiny shinyBS shinyjs survey]; }; ckanr = derive2 { name="ckanr"; version="0.4.0"; sha256="17mb8ank4p39mkmkrpj40hk2g1wpn06k0rx65hqd5h49pvlj21d3"; depends=[DBI dbplyr dplyr httr jsonlite magrittr]; }; clValid = derive2 { name="clValid"; version="0.6-6"; sha256="1l9q7684vv75jnbymaa10md13qri2wjjg7chr1z1m0rai8iq3xxw"; depends=[class cluster]; }; cladoRcpp = derive2 { name="cladoRcpp"; version="0.15.1"; sha256="0msay6yvm6wc964gwrz31ky5w4mizakji3j6rpkydz0zlrl52v1j"; depends=[Rcpp RcppArmadillo]; }; - clam = derive2 { name="clam"; version="2.3.2"; sha256="1za0njc10mcvdmyyy4yy6sgzl6kk2kix319w84d5mcs2zrfb83j4"; depends=[]; }; + clam = derive2 { name="clam"; version="2.3.4"; sha256="1d86m3mf18h0rx03bxc8rx9zsjd77b60ik85mblxg4d4apvzh096"; depends=[]; }; clampSeg = derive2 { name="clampSeg"; version="1.0-5"; sha256="05922fddvi7s4imdnr9fb27aqskgd489amw9h86g5vw4l494lnl9"; depends=[Rcpp stepR]; }; clarifai = derive2 { name="clarifai"; version="0.4.2"; sha256="0igi4xl27nz0r85hpws2zfc2gn5z2nmywp3saxgp74mh2y99lg6s"; depends=[curl jsonlite]; }; + clarkeTest = derive2 { name="clarkeTest"; version="0.1.0"; sha256="0vbb3j9rnh42qyp78a4jykp7p560d0ryfp28xgvxax8h8hr80457"; depends=[]; }; class = derive2 { name="class"; version="7.3-15"; sha256="1x1hqz8xyhbpq4krsh02glqnlzcch25agkmn4a3da9n723b37gzn"; depends=[MASS]; }; classGraph = derive2 { name="classGraph"; version="0.7-5"; sha256="19jb9jr1gfg4karymrbilh0zjrlsczhy2q03x5b0jxnh4ykhxfj8"; depends=[graph Rgraphviz]; }; classInt = derive2 { name="classInt"; version="0.4-2"; sha256="0w980hrw8sgfdfyd5dsimalq7gwhvqm7507abk7k363pvgks23dv"; depends=[class e1071 KernSmooth]; }; - classiFunc = derive2 { name="classiFunc"; version="0.1.1"; sha256="1qaima3sii394741p5n06lcqkk4fiv9apb7qqnpi6srx5h02lfl5"; depends=[BBmisc checkmate dtw fda fda_usc fdasrvf proxy rucrdtw zoo]; }; classifierplots = derive2 { name="classifierplots"; version="1.3.3"; sha256="01rvn0jwliyxj7q4cmyv8an5g7fzn6y3sccp8mj6bcqjyblfcfaa"; depends=[caret data_table ggplot2 gridExtra png Rcpp ROCR]; }; classifly = derive2 { name="classifly"; version="0.4"; sha256="0mw1vcas0gr1r4yvh0j02zhk7kp5342r0bhhg776hqgqdczgh5zj"; depends=[class plyr]; }; - classyfireR = derive2 { name="classyfireR"; version="0.3.0"; sha256="1cagdwr8i3f4c4hjdgg64f3kp7ibndh766na7psd0pmki5s8grsv"; depends=[cli clisymbols crayon dplyr httr jsonlite magrittr purrr stringr tibble]; }; + classyfireR = derive2 { name="classyfireR"; version="0.3.3"; sha256="17h9xx5ap77ry50rbpl9gi1hbp1vahdwl99kkqsra79b8aixs2kj"; depends=[cli clisymbols crayon dplyr httr jsonlite magrittr purrr stringr tibble]; }; cld2 = derive2 { name="cld2"; version="1.2"; sha256="03ffg1nxdlmg66sgg0w2jdx2s5jzdp8qhja24z0il2qy3qsa915k"; depends=[Rcpp]; }; - cld3 = derive2 { name="cld3"; version="1.2"; sha256="11bjkbhjxaf6lc96qm8zk4k1i66b69f8dmc303i1560b2jj2zah3"; depends=[Rcpp]; }; + cld3 = derive2 { name="cld3"; version="1.3"; sha256="1xaac0phck00i2pm81m2xphy7r3lvbvj9z14y6asfz0cfjm7acx3"; depends=[Rcpp]; }; clean = derive2 { name="clean"; version="1.1.0"; sha256="11jfg9xh6xyhcva4pq5bl7bg2d2ar12mp568j8j79dqlci3f53zx"; depends=[crayon knitr pillar rlang]; }; - cleanEHR = derive2 { name="cleanEHR"; version="1.0"; sha256="0i8q7y4izc7q1pshdajy0n9wyihj4wlzzkd52ykam3dxqnwlnyh4"; depends=[data_table ggplot2 knitr pander Rcpp XML yaml]; }; - cleanNLP = derive2 { name="cleanNLP"; version="3.0.0"; sha256="15prwj32rq28dqqpfagaq4vfbimjws7ldrjm7waf4w6rcavz7r93"; depends=[Matrix reticulate stringi udpipe]; }; + cleanNLP = derive2 { name="cleanNLP"; version="3.0.2"; sha256="0fwi717mmw6nb81x4wlq6pfcgv0jizrw2fkiaxz0wnhvkh3i82y6"; depends=[Matrix reticulate stringi udpipe]; }; cleancall = derive2 { name="cleancall"; version="0.1.1"; sha256="1gq7bjywgslybfk97k3fxglp6j78a0cklaammccvffs3b94i4zh4"; depends=[]; }; cleandata = derive2 { name="cleandata"; version="0.3.0"; sha256="1lm7k25j16p888xvd7rzzd3sb3namzjlpjn22xmmpzlzyl0h7dhk"; depends=[]; }; - cleaner = derive2 { name="cleaner"; version="1.3.0"; sha256="0k0nhq6ap3gwdx6vdq226d7x1sp7inrm4cgxlibvaycrg8zbcjxb"; depends=[crayon knitr pillar rlang]; }; + cleaner = derive2 { name="cleaner"; version="1.3.1"; sha256="16p881vv02zbyvia5mdfbmdzy8kdjvz2m221n6y6y8f08cmq3hz2"; depends=[crayon knitr pillar rlang]; }; cleanerR = derive2 { name="cleanerR"; version="0.1.1"; sha256="0rghn8rx7dj5clmc1dqvqwfm9kiva04k9gxsjjga3109l4jcpg63"; depends=[data_table plyr]; }; cleangeo = derive2 { name="cleangeo"; version="0.2-3"; sha256="02py25pir16yklffpdicljxhwdf7bqchqllgdk069f5gikfc8yrr"; depends=[maptools rgeos sp]; }; cleanr = derive2 { name="cleanr"; version="1.3.0"; sha256="15icq6p2sxaz5jsdwqlqg7mgal4310vk96w53wzv3dzpzxndz7s4"; depends=[checkmate pkgload rprojroot]; }; - clere = derive2 { name="clere"; version="1.1.4"; sha256="1nk3chcnaa4y1c5rr6c3bapvi106ikbk9grqcq6s6j0imny1jp4a"; depends=[lasso2 Rcpp RcppEigen]; }; + clere = derive2 { name="clere"; version="1.2.0"; sha256="0qc26ycycxphrbksk7jb1m6vh66a2zsnw8k4jnazs23sqdg24im9"; depends=[Rcpp RcppEigen]; }; clespr = derive2 { name="clespr"; version="1.1.2"; sha256="1993kd70w48a110im47vcpll0c6nfrm7m33r6l8rzgwnpsmcls8g"; depends=[AER clordr doParallel foreach magic MASS pbivnorm survival]; }; clhs = derive2 { name="clhs"; version="0.7-2"; sha256="093hqqbmwbrcggqjcz4yiaavvwpv6xi12nc50ca9sg5ajlg4xg65"; depends=[cluster ggplot2 plyr raster reshape2 scales sp]; }; - cli = derive2 { name="cli"; version="2.0.1"; sha256="0x28i7kj4qndk6mnn99qn9w2nfldv8csjnsn0n8phfnxq5hnmp5y"; depends=[assertthat crayon fansi glue]; }; + cli = derive2 { name="cli"; version="2.0.2"; sha256="1dhkah6jvr96k4h4agcc2rfls75bpjb0j58fzaz3dc0fp3jk8229"; depends=[assertthat crayon fansi glue]; }; cliapp = derive2 { name="cliapp"; version="0.1.0"; sha256="152hllp4iiva2qib79700v1mx1biy8bg4sy496vwq6mi4afvswjy"; depends=[cli crayon fansi glue prettycode progress R6 selectr withr xml2]; }; - clickR = derive2 { name="clickR"; version="0.4.40"; sha256="1wwipqg5d158f4j26bvz2ig2wrcnlxqc713pxnnfml0nmrvnx41w"; depends=[beeswarm boot flextable lme4 lmerTest officer xtable]; }; - clickstream = derive2 { name="clickstream"; version="1.3.0"; sha256="01bii527xy7hdph1pm6f1g4qnwa5yf3mwz01rjg1h2gc12s5vzgg"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; }; + clickR = derive2 { name="clickR"; version="0.4.47"; sha256="1fs0zh9djgvy8cicvab9i6dji85l1z8wlr6wpfypnwvnblc64qam"; depends=[beeswarm boot flextable lme4 lmerTest officer xtable]; }; + clickstream = derive2 { name="clickstream"; version="1.3.1"; sha256="0z1yy5lr9m5x9ybimjy3f6kn490abdi038xi0qw7ny80f1ca6ry7"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; }; + clifford = derive2 { name="clifford"; version="1.0-2"; sha256="17br7p4zj1cjf1nbwbk0a2jjxj589qgvlnzi6yp4dqlf2g0w01z6"; depends=[BH Rcpp]; }; clifro = derive2 { name="clifro"; version="3.2-2"; sha256="11bfvaf1b1wv83dw8ggj7ldsc6fs8s3gl7jdzyq7l1w7innihp9s"; depends=[ggplot2 lubridate magrittr RColorBrewer RCurl reshape2 scales xml2]; }; clikcorr = derive2 { name="clikcorr"; version="1.0"; sha256="0zdnbcl5q293mmm6pbn4ri7p1q6z6sff74axsb3nyd153v2xamr5"; depends=[mvtnorm]; }; - climate = derive2 { name="climate"; version="0.3.0"; sha256="1pabgfx25rza823jrbmk6x2yzv3s7y3zwgiags34z62h9m51772a"; depends=[imgw RCurl XML]; }; + climate = derive2 { name="climate"; version="0.9.1"; sha256="0jy2qhbhwh9f5b7qzpyygd2hhrm6fjvm1i1cc3n9hl5m7j3qaj8j"; depends=[RCurl XML]; }; climateStability = derive2 { name="climateStability"; version="0.1.3"; sha256="1zag722sznr22xid2v1k4a9sh3sr3grfa3wwd2m943zpvyi1sk9a"; depends=[raster]; }; climatol = derive2 { name="climatol"; version="3.1.2"; sha256="0p3nk4n7izj0cmmqd9apa1gix5lfdzp08ydy0n7rkl5kbkmrkb6n"; depends=[mapdata maps]; }; - climbeR = derive2 { name="climbeR"; version="0.0.1"; sha256="10i74bph7dhv2xj01qdhymlmfwj32lzxivanif11zmzmq9p5bqsw"; depends=[ggplot2]; }; + climatrends = derive2 { name="climatrends"; version="0.1.0"; sha256="1jn7xib07n6f9vq614cxahxph4mrs8xbv484npl0702klpk6fjqg"; depends=[nasapower tibble]; }; climdex_pcic = derive2 { name="climdex.pcic"; version="1.1-11"; sha256="01ax0kas43g3h21ixzc80f9gl4m9846gmk8v48rr0gkhcmbcc6jx"; depends=[PCICt Rcpp]; }; clime = derive2 { name="clime"; version="0.4.1"; sha256="0qs9i7cprxddg1cmxhnmcfhl7v7g1r519ff2zfipxbs59m5xk9sf"; depends=[lpSolve]; }; climextRemes = derive2 { name="climextRemes"; version="0.2.1"; sha256="1ii79zfdz90agirh3kbq80qk8nib9ks8f42f6y664j4pwk9550w3"; depends=[boot extRemes]; }; @@ -6075,14 +6083,13 @@ in with self; { clogitLasso = derive2 { name="clogitLasso"; version="1.1"; sha256="1j2kscd6d1jham6yqx5rp78x5vfj2faylkxkbcjaqbynlnqbbxd0"; depends=[foreach lassoshooting]; }; clogitboost = derive2 { name="clogitboost"; version="1.1"; sha256="19wcb7229amlxn6xahxj6pf9rwfm02s7qkxz2yvyhnq95y0clxkm"; depends=[Rcpp]; }; clordr = derive2 { name="clordr"; version="1.5.0"; sha256="0yzkkzp60gnap96hlfpjncxfkfvvma15yxpwf5pv5fgffacb8281"; depends=[doParallel foreach MASS pbivnorm rootSolve tmvmixnorm ttutils]; }; - cloudSimplifieR = derive2 { name="cloudSimplifieR"; version="0.1.9"; sha256="0wp582y817f6z7kpw9nn665d6pdn0zqyadjbragw7ij4x73ncksq"; depends=[aws_s3 aws_signature jsonlite readr]; }; cloudUtil = derive2 { name="cloudUtil"; version="0.1.12"; sha256="18g946j00anlk20d0fh01w0xyj1kwyy7jhlgz5a85wmp6s2gkz74"; depends=[]; }; cloudml = derive2 { name="cloudml"; version="0.6.1"; sha256="1j15q9yb2rc4fbjxfh21fiq6is8dnb8nfyi7g8iazgfwb3p9ahpx"; depends=[config jsonlite packrat processx rprojroot rstudioapi tfruns withr yaml]; }; - clpAPI = derive2 { name="clpAPI"; version="1.2.11"; sha256="0xwwv4ccflrrapqlzwccblyhda5bmbhs7agwwwjriwxnhxghlpbm"; depends=[]; }; + clpAPI = derive2 { name="clpAPI"; version="1.2.13"; sha256="1v1ff7plr9x212cfsva9xp80q7x3vgkgmwj8qj0cch36p5p4973h"; depends=[]; }; clr = derive2 { name="clr"; version="0.1.2"; sha256="088ks9lrhlyvg3yvlfmb0091yp6qp5bzg9h5r6ryv3bk6y56sajx"; depends=[dplyr lubridate magrittr]; }; clrdag = derive2 { name="clrdag"; version="0.6.0"; sha256="1py5x1783c9d83hgar3g70qgbsakgs6n5ckpx87fiw32l040abwa"; depends=[Rcpp RcppArmadillo]; }; clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; }; - clubSandwich = derive2 { name="clubSandwich"; version="0.4.0"; sha256="1kz68vmfahsszxkck3c59qi35sr7987ym0znp07h3smrw1r85xcd"; depends=[sandwich]; }; + clubSandwich = derive2 { name="clubSandwich"; version="0.4.1"; sha256="0m0akad9fs1nzwgz1b2kd9ndf40vr780fha32k1i9m3p6cynn9n8"; depends=[sandwich]; }; clue = derive2 { name="clue"; version="0.3-57"; sha256="05rdcahawxlxci3fjxihjvvh33wqpxw50sx015165ab4nh3rsdkf"; depends=[cluster]; }; clues = derive2 { name="clues"; version="0.6.2.2"; sha256="1pvalkpvxjj6qrvffbx0sqvfmcxf6dkzrpklshkx1b2k5s4z8791"; depends=[]; }; cluscov = derive2 { name="cluscov"; version="1.1.0"; sha256="0345v5r6b53243h5bir29v0w77pmwjqjkqfrjnk5j5r1wbh98q1w"; depends=[MASS quantreg]; }; @@ -6091,8 +6098,7 @@ in with self; { clustDRM = derive2 { name="clustDRM"; version="0.1-0"; sha256="1c5z08a15scp3nrwyh0c03pdaawvm3ivbygqpbglwxim7zf73rd2"; depends=[caret doParallel DoseFinding DT foreach IsoGene MCPMod multcomp ORCME ORIClust pheatmap RColorBrewer readr shiny]; }; clustEff = derive2 { name="clustEff"; version="0.1.2"; sha256="1hy7jc8yfg554l439lfrppdsizrdmvxrqf9dwbkjckbvggg54f0k"; depends=[cluster fda qrcm]; }; clustMD = derive2 { name="clustMD"; version="1.2.1"; sha256="0w4s9dab2mm5x0xibyl6s101c64if945a2cmwin9psd95p76mcny"; depends=[ggplot2 MASS mclust msm mvtnorm reshape2 truncnorm viridis]; }; - clustMixType = derive2 { name="clustMixType"; version="0.2-1"; sha256="1m6pv1r3wdszji8nqs6yyl2405092yrdxq3vl8z1x15lnj1c87yh"; depends=[RColorBrewer]; }; - clustRcompaR = derive2 { name="clustRcompaR"; version="0.2.0"; sha256="151xq8qf1mrl35kyhdliwl2jpdkpkbl3gdnrvrybanihry2p0kqg"; depends=[dplyr ggplot2 ppls quanteda]; }; + clustMixType = derive2 { name="clustMixType"; version="0.2-2"; sha256="143xq457migvdfylgyfs19arlmzc9gy360sva49fi56jaz6xqhvr"; depends=[RColorBrewer]; }; clustcurv = derive2 { name="clustcurv"; version="1.0.0"; sha256="055hxwpvfm37gvgc5ar8qk6ksny89hmr79w1jmxyynml47lwllrl"; depends=[doParallel doRNG foreach ggfortify ggplot2 Gmedian survival wesanderson]; }; cluster = derive2 { name="cluster"; version="2.1.0"; sha256="055af3yz2biqbsbwm4arwr1yqnj4gicpzv2i6dbfl5pnz2z5byga"; depends=[]; }; cluster_datasets = derive2 { name="cluster.datasets"; version="1.0-1"; sha256="0i68s9305q08fhynpq24qnlw03gg4hbk4184z3q3ycbi8njpr4il"; depends=[]; }; @@ -6103,24 +6109,24 @@ in with self; { clusterRepro = derive2 { name="clusterRepro"; version="0.9"; sha256="0s7qqvaf5yxxwhw6qyzfmk65c49yz405gljarwav6aglkx9883cl"; depends=[]; }; clusterSEs = derive2 { name="clusterSEs"; version="2.6.2"; sha256="15a9hn8g70y64v5lq91mwjbx411ji2b5zvm1wm4qz820jri5wy20"; depends=[AER Formula lmtest mlogit plm sandwich]; }; clusterSim = derive2 { name="clusterSim"; version="0.48-3"; sha256="1037d9nwj214vgmva6590kvyqr19brbnmb36inkgph4mg3276lsf"; depends=[ade4 cluster e1071 MASS R2HTML rgl]; }; - clusterability = derive2 { name="clusterability"; version="0.1.0.0"; sha256="1zc6b8j4vq1dz7f15x7ip2qwh56srj0wk1pkjwjca0ddlagaj72z"; depends=[diptest]; }; + clusterability = derive2 { name="clusterability"; version="0.1.1.0"; sha256="15gimcs6wrasafg1ys7id0mkg9fvacxbwpgg9d4b5avk4gff39bs"; depends=[diptest]; }; clusteredinterference = derive2 { name="clusteredinterference"; version="1.0.1"; sha256="01w7i9pmvwmrlf5q6y2d48ib0bm16j16xiw4pqnrvbndx4d6wf6n"; depends=[cubature Formula lme4 numDeriv rootSolve]; }; clusterfly = derive2 { name="clusterfly"; version="0.4"; sha256="0mxpn7aywqadyk43rr7dlvj0zjcyf4q7qbqw5ds38si7ik34lkrg"; depends=[e1071 plyr reshape2 rggobi RGtk2]; }; clusterhap = derive2 { name="clusterhap"; version="0.1"; sha256="1ic6588mqp146jsvrxlxk449zw4n81xixgrny9r29497z7hg5a1m"; depends=[]; }; clustering_sc_dp = derive2 { name="clustering.sc.dp"; version="1.0"; sha256="0cppka7613cbjjf1q2yp6fln511wbqdhh8d4gs6p0fbq379kzmvc"; depends=[]; }; clusterlab = derive2 { name="clusterlab"; version="0.0.2.8"; sha256="10z5p79a7nafnljl3s17mw22zasxp45nfbxmhilmyfq6kblxj1zm"; depends=[ggplot2 reshape]; }; - clustermole = derive2 { name="clustermole"; version="1.0.0"; sha256="05sip8zis5i0sin9fsz39yin06154si63h45sp5pkzb0qwacyqbr"; depends=[dplyr GSVA magrittr rlang tibble tidyr]; }; - clustermq = derive2 { name="clustermq"; version="0.8.8.1"; sha256="1xx2dq3rhyxq3qzgr6gh1yh2qli0s5hrvn096ak18z6ydzyn2g0z"; depends=[narray progress purrr R6 rzmq]; }; + clustermole = derive2 { name="clustermole"; version="1.0.1"; sha256="15d7khwg4rjshbkkcqrmw9dk8wy683z8ix5n6xdrlvp0rq3l3n2c"; depends=[dplyr GSVA magrittr rlang tibble tidyr]; }; + clustermq = derive2 { name="clustermq"; version="0.8.9"; sha256="128b71h9vxai3j7bbbkx9pm5mabpxdad5qwgxrc8a6sws790yn4b"; depends=[narray progress purrr R6 rzmq]; }; clusternomics = derive2 { name="clusternomics"; version="0.1.1"; sha256="05nkw6h2dvky07fj50myzw5xlkqyiflbn4vwqw8a1q2idv4awi7b"; depends=[magrittr MASS plyr]; }; - clusternor = derive2 { name="clusternor"; version="0.0-3"; sha256="0qf1k5y9i60skdqz7glq7czwg84gafnxfg0npx772xydvivan210"; depends=[Rcpp]; }; + clusternor = derive2 { name="clusternor"; version="0.0-4"; sha256="19ac45jn9lkd600nnaib2f0ricdvh0dv3l1ap6c9vn655rgl9i3s"; depends=[Rcpp]; }; clustertend = derive2 { name="clustertend"; version="1.4"; sha256="1aqg8cy1hk3lmzvyqh9qc1mcknrva2i0c77hyd0yff9whz80ik4j"; depends=[]; }; clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; }; - clustrd = derive2 { name="clustrd"; version="1.3.6-2"; sha256="06njv48sb3j7d5517l6c886hqmlyp5vk6pk5zpmdmzcxay6c81qy"; depends=[ca cluster corpcor dplyr fpc GGally ggplot2 ggrepel plyr rARPACK tibble]; }; - clustree = derive2 { name="clustree"; version="0.4.1"; sha256="0jsffqd25ad08q35a3ggzblhia7y6m5gj972kij6nrbah920qk0x"; depends=[checkmate dplyr ggplot2 ggraph ggrepel igraph rlang tidygraph viridis]; }; + clustrd = derive2 { name="clustrd"; version="1.3.7-2"; sha256="0j0nmqc9q9djg824g89z27xizdy1jdsygz1gc0r0mrzdd3dyk2ya"; depends=[ca cluster corpcor dplyr fpc GGally ggplot2 ggrepel plyr rARPACK tibble]; }; + clustree = derive2 { name="clustree"; version="0.4.2"; sha256="0bpqvy49vyvfmmrbbkf1kv87x125kr10fhdyg9d27pdwrgiqwssx"; depends=[checkmate dplyr ggplot2 ggraph ggrepel igraph rlang tidygraph viridis]; }; clustringr = derive2 { name="clustringr"; version="1.0"; sha256="07f0ywpkf8igic7ijvvrjlngq3smjcv9nqnah41fp6wfgvh49ifq"; depends=[assertthat dplyr forcats ggplot2 ggraph igraph magrittr rlang stringdist stringi stringr tidygraph]; }; clustsig = derive2 { name="clustsig"; version="1.1"; sha256="0n5nf712vsa8zb0c2lv4gjqsgva62678vjngr9idgswb73shxm8v"; depends=[]; }; clustvarsel = derive2 { name="clustvarsel"; version="2.3.3"; sha256="1dw9iniy2vw4yz1jip4jja6fsp03kbr86mm5knbhhyc0l24i0wrz"; depends=[BMA foreach iterators Matrix mclust]; }; - clv = derive2 { name="clv"; version="0.3-2.1"; sha256="1qgp2qhblg6ysyrlg0ad169ahwhcyn5pvsqzdlqj700y1k7wl7mc"; depends=[class cluster]; }; + clv = derive2 { name="clv"; version="0.3-2.2"; sha256="072jn3xh6ii7vfp0gx03k1hiafnla1lkyn5hpj17nmqc0jvzp683"; depends=[class cluster]; }; cmaes = derive2 { name="cmaes"; version="1.0-11"; sha256="1hwf49d1m660jdngqak9pqasysmpc4jcgr8m04szwbyzyy6xrm5k"; depends=[]; }; cmaesr = derive2 { name="cmaesr"; version="1.0.3"; sha256="03zx2nrw24wmmjjpyh8pswasjjq0amf0g375fm2b3s111dx8fbj9"; depends=[BBmisc checkmate ggplot2 ParamHelpers smoof]; }; cmce = derive2 { name="cmce"; version="0.1.0"; sha256="0d52ci906zbd4q43qylcyw93acxh7f20jn3r0k74ynyy47131dnd"; depends=[]; }; @@ -6129,7 +6135,6 @@ in with self; { cmmr = derive2 { name="cmmr"; version="0.1.2"; sha256="0nik1pzd1rckalvn7xh6s699kkdjnra3q3bn5x16c1lmpz5bp2s4"; depends=[httr progress RJSONIO]; }; cmna = derive2 { name="cmna"; version="1.0.2"; sha256="18vbqa258m0g5pvfhqi2vbr8n2bil07n9spgz1wh2axw1c3bcf76"; depends=[]; }; cmocean = derive2 { name="cmocean"; version="0.2"; sha256="0v1bm2qgvjb82ynakglr61swx5jy41ngn6vml5gllv3r7skqr1is"; depends=[]; }; - cmpprocess = derive2 { name="cmpprocess"; version="1.1"; sha256="03r0sfkf955w59dixya5agff0xdlwmxrlwvik7716l1alydcl4vl"; depends=[compoisson numDeriv]; }; cmprsk = derive2 { name="cmprsk"; version="2.2-9"; sha256="0xhgfg5b4i9skkaxp7gzkafgg5bqs5q1rp4hpw2jjmykg2nifn99"; depends=[survival]; }; cmprskQR = derive2 { name="cmprskQR"; version="0.9.2"; sha256="1b3di5fsgglriv00fxydpc4p8lh0xcgi6jc04awq2vmp6s8kvjmw"; depends=[quantreg survival]; }; cmrutils = derive2 { name="cmrutils"; version="1.3.1"; sha256="0nrq84bkd23lvvg8ls2smkjcnfnydhbcni3n6s8w0579i9xga8dv"; depends=[chron]; }; @@ -6140,9 +6145,10 @@ in with self; { cnbdistr = derive2 { name="cnbdistr"; version="1.0.1"; sha256="05qi41jimslbngjgbwzfda0q25hb28ax79v9yckvrbpgjc8dk990"; depends=[hypergeo]; }; cncaGUI = derive2 { name="cncaGUI"; version="1.0"; sha256="1v55kvrc05bsm1qdyfw3r3h64wlv3s6clxbr8k512lfk99ry42kn"; depends=[MASS plotrix rgl shapes tcltk2 tkrplot]; }; cnmlcd = derive2 { name="cnmlcd"; version="1.2-0"; sha256="1vpn926wf8vkifscnb35y4c74721iar2wykrl50fcv0fg16yggnd"; depends=[lsei]; }; - coRanking = derive2 { name="coRanking"; version="0.1.4"; sha256="03wvy19jrb3q31yfpmakji25zwc6zx26irj4rwkad81iwdqihq3s"; depends=[]; }; + coRanking = derive2 { name="coRanking"; version="0.2.1"; sha256="10489vbd917mzz5lw7ygi6q8q5qa7sp5d8xgv1ykn4lfx0avch69"; depends=[]; }; coala = derive2 { name="coala"; version="0.6.0"; sha256="0h7kc12yc90y5i733l6sfd9h12h0a2c7wv9wscjslj18sl3w3ccv"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; }; coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; + coalitions = derive2 { name="coalitions"; version="0.6.12"; sha256="11844sz65axj23xwv505jxck37xv3a5n36jpdr9ywvmb19gshar7"; depends=[checkmate dplyr ggplot2 gtools jsonlite lubridate magrittr purrr RCurl rlang rvest stringr tidyr xml2]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-5"; sha256="1k42vl49kfbllc5d66yn7y9f4jgbkfibmd85nl7hwm0gkgkssg36"; depends=[MCMCpack]; }; cobalt = derive2 { name="cobalt"; version="4.0.0"; sha256="14g5a0j3lcd61igsi2phhfpcfxwgiq7jlakr9nr4yb5h345zwvx7"; depends=[backports crayon ggplot2 ggstance gridExtra gtable]; }; cobiclust = derive2 { name="cobiclust"; version="0.1.0"; sha256="068cqrhx7lxsvcjb62rgrca7y20cybz4445bl1qc6k16ca4bh0m9"; depends=[cluster]; }; @@ -6167,12 +6173,12 @@ in with self; { coenocliner = derive2 { name="coenocliner"; version="0.2-2"; sha256="0r4h0r3av2d1cxmjpwaabjn807626pzqnra2x542wdnnf7h8nmdf"; depends=[]; }; coenoflex = derive2 { name="coenoflex"; version="2.2-0"; sha256="06f75spl4wkbgicm0bksnid2lb1gkvi05915wn5y4km45d82fkkr"; depends=[mgcv]; }; coexist = derive2 { name="coexist"; version="1.0"; sha256="15ydhrx996i6caa0360c2bgn2zvgwfg5wdhsqq1gvrggs15w7nml"; depends=[]; }; - cofad = derive2 { name="cofad"; version="0.1.0"; sha256="034ihvg2bqlfhpwivza15slksn7zxk3k20rdyx9zlriqzfgvlwws"; depends=[]; }; + cofad = derive2 { name="cofad"; version="0.1.1"; sha256="0c27wfdk98mq0531avlgfxf2wmxcjyg39pgl9i37im7ri2s7kpnr"; depends=[]; }; cofeatureR = derive2 { name="cofeatureR"; version="1.1.1"; sha256="1awfrlnbpw9ivfvaahznx6dx5jp8ln0154vh2pznp520q59h1mbs"; depends=[dplyr ggplot2 lazyeval tibble]; }; coga = derive2 { name="coga"; version="1.1.0"; sha256="0p2mdia89gj7w0j33qxil1l2zg6civj18i3pqym7aijzz1fgwnzp"; depends=[cubature Rcpp RcppGSL]; }; cogmapr = derive2 { name="cogmapr"; version="0.9.1"; sha256="1iz776avw05a0lcna78fycixacby4bjf8ar1jazsf34yss6zka23"; depends=[car dplyr ggplot2 graph magrittr Rgraphviz tidyr]; }; - cohorttools = derive2 { name="cohorttools"; version="0.1.0"; sha256="0350q0dyy0rfk2g8anc62cib2gq7hi4zzg3gsd02fhwadz5gnjga"; depends=[DiagrammeR DiagrammeRsvg Epi epitools rsvg survival]; }; - coil = derive2 { name="coil"; version="1.1.0"; sha256="1b73r51vyw4cb4ck3xvig0nhjf3hglg58s4kc1b28zzqzl7ay78k"; depends=[ape aphid seqinr]; }; + cohorttools = derive2 { name="cohorttools"; version="0.1.2"; sha256="0hfpl2dm5ykagwmmdmk0hpbkzzd0zqmf9andm510safjp4mlbcy0"; depends=[cmprsk DiagrammeR DiagrammeRsvg Epi ggplot2 rsvg survival]; }; + coil = derive2 { name="coil"; version="1.2.1"; sha256="0s11v1hcksljpxnlkmrlnnamx4mlsck45hsjm4xlhc1zb7x9kqf5"; depends=[ape aphid seqinr]; }; coin = derive2 { name="coin"; version="1.3-1"; sha256="0qi03fyqw42a2vnqcia5l2m1mzyarj2q1iblknx9n19bdsd53qjx"; depends=[libcoin matrixStats modeltools multcomp mvtnorm survival]; }; coindeskr = derive2 { name="coindeskr"; version="0.1.0"; sha256="0iwkg9qx5gymzjxw3w1zlwq9336kbqp4z8a9wf9a1p2gp9727qcm"; depends=[httr jsonlite]; }; coinmarketcapr = derive2 { name="coinmarketcapr"; version="0.3"; sha256="149ilps378rvk4g3icasb843d90vmx69kfdcl6a8828v1mg0pcvs"; depends=[cli crayon curl data_table ggplot2 jsonlite]; }; @@ -6184,13 +6190,15 @@ in with self; { collapsibleTree = derive2 { name="collapsibleTree"; version="0.1.7"; sha256="0b65pbp1wnpsrayqi630ds4r98jvcvynnlp6wxdqrnnr9nzw5343"; depends=[data_tree htmlwidgets]; }; collateral = derive2 { name="collateral"; version="0.4.2"; sha256="1i1fzvm838s2cfmxw654vwmp9rl9f9985vjildkxyx2f6571sjfm"; depends=[crayon pillar purrr]; }; collectArgs = derive2 { name="collectArgs"; version="0.4.0"; sha256="0fz5w1xsxiddzrwahrg50px4igyhd4plq655jaix6grancs7kvix"; depends=[magrittr]; }; - collections = derive2 { name="collections"; version="0.2.3"; sha256="1fkajfmh7zx2a111js2sdlkzx5q0an67s7ns9jsy65zl7iqis3i0"; depends=[xptr]; }; + collections = derive2 { name="collections"; version="0.2.5"; sha256="195i6kxy3h0q99jr5hi20m15zpk8fgb17126w7qyxfq7mhrsvhmh"; depends=[xptr]; }; + collector = derive2 { name="collector"; version="0.1.3"; sha256="1yn6gzccdbp7n4qnwqpv66617qldjabzrlww41v6wqn9b7qyr0ii"; depends=[dplyr EnvStats evaluator flextable ggplot2 ggpubr magrittr officer purrr quanteda readr rlang rmarkdown stringr tibble tidyr xaringan]; }; collidr = derive2 { name="collidr"; version="0.1.2"; sha256="1b8yy0p1r4gs6azcl1aqkny3hws5hhl9bvsrkrhgk2r2xni9sk6f"; depends=[dplyr jsonlite stringr]; }; collpcm = derive2 { name="collpcm"; version="1.1"; sha256="14rlipdww5sm1ijp2ggpnd23m14qh10zm99cfq1w0kky9jfl0fkn"; depends=[latentnet network vegan]; }; colmozzie = derive2 { name="colmozzie"; version="1.1.1"; sha256="0sn7dqg7rnddnmdb10c6scws6kgi1lz4lw8nc698x63z431ah1p8"; depends=[]; }; coloc = derive2 { name="coloc"; version="3.2-1"; sha256="0sm2mji8bihvcshkh9g18sgbwznhh8j4hip50rk7ckac3vc8y75h"; depends=[BMA data_table ggplot2 reshape snpStats]; }; colocalization = derive2 { name="colocalization"; version="1.0.1"; sha256="0ax560r5f629zv8rfa91ynx8g3kcn5ga553k5svircl21n65zb1y"; depends=[ggplot2]; }; colocalized = derive2 { name="colocalized"; version="0.2.0"; sha256="1q98wfqk0p9p92jgjf8liamz6grzwy6h57k7681fm07wfnyr268g"; depends=[doParallel foreach purrr]; }; + colorBlindness = derive2 { name="colorBlindness"; version="0.1.6"; sha256="18922caddz7c5dj5mbyl7qihgsnk384w31k17rwngm5hckz2d5yi"; depends=[colorspace cowplot ggplot2 gridGraphics gtable]; }; colorRamps = derive2 { name="colorRamps"; version="2.3"; sha256="0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z"; depends=[]; }; colorSpec = derive2 { name="colorSpec"; version="1.1-1"; sha256="0c1da94abjq439h7y2rylidp9lnh6i2wc7m27cawkr983jpxcq0m"; depends=[MASS spacesXYZ]; }; colordistance = derive2 { name="colordistance"; version="1.1.0"; sha256="0aiqvx0mlraczkcfhzfcaavmqqmxiffnghhw266f84bphxw6b5q2"; depends=[abind ape clue emdist gplots jpeg magrittr mgcv plotly png scales scatterplot3d spatstat]; }; @@ -6207,11 +6215,11 @@ in with self; { colortools = derive2 { name="colortools"; version="0.1.5"; sha256="0z9sx0xzfyb5ii6bzhpii10vmmd2vy9vk4wr7cj9a3mkadlyjl63"; depends=[]; }; colourlovers = derive2 { name="colourlovers"; version="0.3.5"; sha256="172ny0w9n2ys8pa7zxkfjsl7lv6fa59bmmbkzlwfx59wamxahmky"; depends=[httr jsonlite png XML]; }; colourpicker = derive2 { name="colourpicker"; version="1.0"; sha256="0z3v2083g7kwdp21x9s2n1crfh24agpdq3yxkcdzc2awn2pwpnpi"; depends=[ggplot2 htmltools htmlwidgets jsonlite miniUI shiny shinyjs]; }; - colourvalues = derive2 { name="colourvalues"; version="0.3.2"; sha256="1ap2k9b4f0x8di0vk4756x05im64ypxhcz6s584w6j7hx4jfl3wr"; depends=[BH Rcpp]; }; + colourvalues = derive2 { name="colourvalues"; version="0.3.4"; sha256="0b5ni3wx8hid6kf13mihphjxdrfz7srlgd9vhrlbxk9mlxzh593y"; depends=[BH Rcpp]; }; colourvision = derive2 { name="colourvision"; version="2.0.2"; sha256="15ndhqpp5fi9jgiri9ysl68nf4rdamh9c25svf5nvh2wvv8shrd9"; depends=[Matrix rgl]; }; colr = derive2 { name="colr"; version="0.1.900"; sha256="0ilz1y0jd2vgyh81g3dwx2l64sir6z6sgmqx7lnvr1hafsqnwfc8"; depends=[]; }; colt = derive2 { name="colt"; version="0.1.1"; sha256="028jqvgr14ig8jxp8h2lrf7mainzppgqh6v1479qfv4l9is3bnwy"; depends=[crayon]; }; - comat = derive2 { name="comat"; version="0.7.2"; sha256="1rca5n47ypw8mbhx40x9vi4wvkpnzzyxgm4vb7sq32w5pnydnkcn"; depends=[Rcpp RcppArmadillo]; }; + comat = derive2 { name="comat"; version="0.8.2"; sha256="0yhldgbz992pplxpsmkyhw54b35yr3x9fdd05iprnnq1r04hsr09"; depends=[Rcpp RcppArmadillo]; }; comato = derive2 { name="comato"; version="1.1"; sha256="0lidwr5vw10655p7q0iqzq3phq5y1i86w3bjdv87cwx3m6333bz6"; depends=[cluster clusterSim gdata igraph lattice Matrix XML]; }; combinat = derive2 { name="combinat"; version="0.0-8"; sha256="1h9hr88gigihc4na7lb5i7rn4az1xa7sb34zvnznaj6pdrmwy4qm"; depends=[]; }; combiter = derive2 { name="combiter"; version="1.0.3"; sha256="11pcvrpbvkzkjwks2z6ww7s9d5fkh8zl0jw52a5ya3y1wkqcs3n6"; depends=[iterators itertools Rcpp]; }; @@ -6221,29 +6229,27 @@ in with self; { commandr = derive2 { name="commandr"; version="1.0.1"; sha256="1d6cha5wc1nx6jm8jscl7kgvn33xv0yxwjf6h3ar3dfbvi4pp5fk"; depends=[]; }; commentr = derive2 { name="commentr"; version="1.0.4"; sha256="0anlcbk8rj0yr8i23qmr6v5ws0695nkc3mvgr6pnq1fg2d4c4brj"; depends=[stringr]; }; commonmark = derive2 { name="commonmark"; version="1.7"; sha256="024iz1qp2kv6iz6y69ir0jk3qhjps86rhkzlcmhqsxx97rx7cjni"; depends=[]; }; - commonsMath = derive2 { name="commonsMath"; version="1.2.4"; sha256="12hwl3xjm7kl5y36v3y4jyr2gk4l87mff237qms2hy8y41nwwagr"; depends=[]; }; + commonsMath = derive2 { name="commonsMath"; version="1.2.5"; sha256="1c4lgmggpc22mhwcpy521b2pg8wf4bbjp0a6rbcn0aki90xw9ckk"; depends=[]; }; comorbidity = derive2 { name="comorbidity"; version="0.5.3"; sha256="10zlq1586abngdrw5hgba78ridn3xj4q68f34slxpk0gxwa94n7p"; depends=[checkmate data_table]; }; compHclust = derive2 { name="compHclust"; version="1.0-3"; sha256="0agay7rn5mrw07imz4l547b7m9pfcg3rhz4krfxrvg1q2z2kryvj"; depends=[]; }; compactr = derive2 { name="compactr"; version="0.1"; sha256="0f2yds6inmx0lixj08ibqyd2i61l2cbg1ckgpb8dl2q7kcyyd6mx"; depends=[]; }; compare = derive2 { name="compare"; version="0.2-6"; sha256="0k9zms930b5dz9gy8414li21wy0zg9x9vp7301v5cvyfi0g7xzgw"; depends=[]; }; compareC = derive2 { name="compareC"; version="1.3.1"; sha256="0dachfr23lps2jj1y5gc958k54vskmww84gdgk4amihsdgjsnphg"; depends=[]; }; - compareDF = derive2 { name="compareDF"; version="2.0.0"; sha256="1h93kh2bzy94ylghwixwhg8s6issz94ya0358xff3v9f6nlwh7k6"; depends=[dplyr htmlTable magrittr openxlsx stringr tidyr]; }; + compareDF = derive2 { name="compareDF"; version="2.0.1"; sha256="1b9059r7mpkarkp7crr847a12vhgmazqsr0wji4lq09m8vi8rz6n"; depends=[dplyr htmlTable magrittr openxlsx stringr tidyr]; }; compareGroups = derive2 { name="compareGroups"; version="4.2.0"; sha256="0lq5yd6d1vz8lzy1lnfav2726g3xdfxlbza055g0paxbxzxgs2n0"; depends=[chron epitools flextable HardyWeinberg kableExtra knitr officer rmarkdown SNPassoc survival writexl]; }; compareODM = derive2 { name="compareODM"; version="1.2"; sha256="019hq8j56asjvh4x1p65785mf38xr05j3by0749gl9k9yl8645da"; depends=[XML]; }; comparison = derive2 { name="comparison"; version="1.0-4"; sha256="0pc462rhk8gr8zrf08ksi315kmhydlp027q5gd40ap5mmhk7rd82"; depends=[isotone]; }; compas = derive2 { name="compas"; version="0.1"; sha256="1ckryllwd8avz6456970qhfa3wpcsmhkicnibnv7gl4crzf44xgx"; depends=[bio3d Rcpp RcppEigen]; }; compboost = derive2 { name="compboost"; version="0.1.0"; sha256="0q7jfj5yc2jvddyyhnzv8fnlmngjfws7cg2blxai76s2fw6bmgxp"; depends=[checkmate glue R6 Rcpp RcppArmadillo]; }; - compeir = derive2 { name="compeir"; version="1.0"; sha256="1bb5459wcqpjic2b9kjn0l0qdn7sqmmx34hdb2aqg80q22mhx5dv"; depends=[etm lattice]; }; compendiumdb = derive2 { name="compendiumdb"; version="1.0.3"; sha256="0glaqlzz5wr14yfhka1y7yw5ha6yc4waw61msbz0vkwj5z2hd2hk"; depends=[Biobase GEOquery RMySQL]; }; - comperank = derive2 { name="comperank"; version="0.1.0"; sha256="0fxg32kp4v42455fia48rnbd3v84g4vsh4r4qc29d0gg93ymz9hp"; depends=[comperes dplyr Rcpp rlang tibble]; }; + comperank = derive2 { name="comperank"; version="0.1.1"; sha256="0wz46rkpx1cjjng3i03pms2x27cik9wbx7al5r289ym3664zb83m"; depends=[comperes dplyr Rcpp rlang tibble]; }; comperes = derive2 { name="comperes"; version="0.2.3"; sha256="1mz8002zqyyzdd2ija0iqc1fm10px6ll0bsl3pmfwwdqbqx17rmz"; depends=[dplyr magrittr rlang tibble tidyr]; }; competitiontoolbox = derive2 { name="competitiontoolbox"; version="0.1.2"; sha256="1k45y7zcckvpcx4pdin9zlsx1vrqlqx9lz67cbsawb254wbylc4l"; depends=[antitrust ggplot2 rhandsontable shiny trade]; }; completejourney = derive2 { name="completejourney"; version="1.1.0"; sha256="0ysbpmd7rglz3diy2cpcgvmmcnysradb4ddiwix7kbhzrhvhrdrs"; depends=[curl dplyr progress stringr tibble zeallot]; }; complexity = derive2 { name="complexity"; version="1.1.1"; sha256="1lpsvry88jpqfw0wkdlwjzkqjl17f4adjcqvq0dwk483mi54xnfk"; depends=[combinat shiny]; }; complexplus = derive2 { name="complexplus"; version="2.1"; sha256="16w9v7d1ckavqmr86l34frr37pkvdn0iqnb17ssb8xaggns5lgqx"; depends=[expm Matrix]; }; complmrob = derive2 { name="complmrob"; version="0.7.0"; sha256="0dvkc5y53041agkjz3rl898hkq686pxzr6flf2qx1g3jbza3pk1y"; depends=[boot ggplot2 robustbase scales]; }; - compoisson = derive2 { name="compoisson"; version="0.3"; sha256="0v5dl7xydqi4p97nipn4hyhpq2gghmx81ygvl0vc8b65jhq89y0p"; depends=[MASS]; }; - compositions = derive2 { name="compositions"; version="1.40-3"; sha256="103hbmibrf1n333pn4xpll1gqqsv4szms0n5gdq7zak31aar0bg4"; depends=[bayesm robustbase tensorA]; }; + compositions = derive2 { name="compositions"; version="1.40-4"; sha256="0z40llyij3cc80ac1vzzrpykk6ysp89bn6dyyh40fbnc4anwx69a"; depends=[bayesm robustbase tensorA]; }; compound_Cox = derive2 { name="compound.Cox"; version="3.19"; sha256="1wl8jg916567nk0wy37in6syh7z2rw70v5jm7s0w3ifiqs5v7nzb"; depends=[numDeriv survival]; }; comprehenr = derive2 { name="comprehenr"; version="0.6.7"; sha256="0c0wid4lch7yrz41b8n773hy4zj80sfb1lhy4pclvlsjdr5zryk6"; depends=[]; }; compstatr = derive2 { name="compstatr"; version="0.2.0"; sha256="07kak4dc1q44m58wb7ps4bf5ikcnjfkvd7fn1mxfxvqljrdy6978"; depends=[dplyr fs httr janitor lubridate purrr readr rlang rvest sf stringr tibble tidyr xml2]; }; @@ -6260,16 +6266,16 @@ in with self; { concurve = derive2 { name="concurve"; version="2.3.0"; sha256="1bjdlr3hpnv69g5jg2y18zkly0al3g9qj8cq0dlpk7x6930imqx7"; depends=[bcaboot boot dplyr flextable ggplot2 knitr MASS metafor officer pbmcapply ProfileLikelihood rlang scales survival survminer tibble tidyr]; }; cond = derive2 { name="cond"; version="1.2-3.1"; sha256="1j0gf28mg2j6ahs83nk662bix1lb2c9184vn8sblw433zxqaa2ny"; depends=[statmod survival]; }; condGEE = derive2 { name="condGEE"; version="0.1-4"; sha256="0mqj2pc91n8h3arpd4b9f7ndbcnai21c67is22qg22wj7vhhs87h"; depends=[numDeriv rootSolve]; }; - condMVNorm = derive2 { name="condMVNorm"; version="2015.2-1"; sha256="04563jljnjhbiaiq33gn5dxjfvv05xp3lhl3w942v0smy0cdhrh4"; depends=[mvtnorm]; }; + condMVNorm = derive2 { name="condMVNorm"; version="2020.1"; sha256="115pxnff2ckdxx0avbs0hfdhh1sljiz1y6h7ggd5hidrxd3559m4"; depends=[mvtnorm]; }; condSURV = derive2 { name="condSURV"; version="2.0.1"; sha256="0xjpypc4fzrnfjcznyc2bslkkza4fib8nx8ff2j7xh2nf84lk3f1"; depends=[doParallel doRNG foreach KernSmooth np survival]; }; condformat = derive2 { name="condformat"; version="0.8.0"; sha256="1x3sm3fn5lb07gmxvfaa0xnhk5mjnim90p7mwail8dmi9nygrb9d"; depends=[dplyr gridExtra gtable htmlTable htmltools knitr lazyeval magrittr rlang rmarkdown scales tibble tidyselect]; }; - condir = derive2 { name="condir"; version="0.1.1"; sha256="133598h1ga4jyr77lchnby6m8bh3adq6s38cgw45q4fyvzad4qds"; depends=[BayesFactor effsize knitr psych shiny xtable]; }; + condir = derive2 { name="condir"; version="0.1.2"; sha256="1vd3nw2hhldy7igpx58p6if6q2h99d7ypb2ldxkssq6y79n8hq99"; depends=[BayesFactor effsize knitr psych shiny xtable]; }; conditionz = derive2 { name="conditionz"; version="0.1.0"; sha256="0ijnsg6n3p3y8y9il012xg5if57hdzvrgxjcykfrrlil4m7ixn6c"; depends=[R6 uuid]; }; condusco = derive2 { name="condusco"; version="0.1.0"; sha256="0zydinzlksynkz4r712rzv9qqdx8dkdz3h1ygi9cfmd6hya3580s"; depends=[assertthat bigrquery DBI jsonlite]; }; condvis = derive2 { name="condvis"; version="0.5-1"; sha256="1ngxqfa0mr86cv610da4ljypxpdvx0n5pfgj3zfksnwxlwc0dvbj"; depends=[MASS]; }; condvis2 = derive2 { name="condvis2"; version="0.1.0"; sha256="1xvxqr311wwi8ns31zqnxxb7bji3vl296j3qfq7vh0alxlhd4n4r"; depends=[cluster DendSer ggplot2 kmed plyr RColorBrewer scales shiny]; }; coneproj = derive2 { name="coneproj"; version="1.14"; sha256="0km7njsxjgrv4d8bx709nci59ngm00jg1r55702yapyjl0f2zg93"; depends=[Rcpp RcppArmadillo]; }; - conf = derive2 { name="conf"; version="1.6.2"; sha256="0q5cs0m2r0pickx2w27nq01rshfzfrxj95lxic1r2lyblf06hqgz"; depends=[fitdistrplus pracma STAR statmod]; }; + conf = derive2 { name="conf"; version="1.6.3"; sha256="0i8ayn47jli06d76y5a7n087zj7ag6hhjwq5xi109jbfynzxv1h0"; depends=[fitdistrplus pracma STAR statmod]; }; conf_design = derive2 { name="conf.design"; version="2.0.0"; sha256="06vdxljkjq1x56xkg041l271an1xv9wq79swxvzzk64dqqnmay51"; depends=[]; }; confSAM = derive2 { name="confSAM"; version="0.2"; sha256="1l67ndya07hh0yqfbabfhsvp3hryklx0022grpr0cb7ff88d1zam"; depends=[]; }; confidence = derive2 { name="confidence"; version="1.1-2"; sha256="0m6iz59n5jpi0ig3za3nir4d4bdsysf5g47d2nakfmaz03wk520z"; depends=[ggplot2 knitr markdown plyr xtable]; }; @@ -6278,23 +6284,24 @@ in with self; { configural = derive2 { name="configural"; version="0.1.1"; sha256="0xn52lg0fzd0m0k9sw90lv8vzhlp6knaya4crzl6rhfihyv9bq3m"; depends=[cli crayon dplyr stringr]; }; confinterpret = derive2 { name="confinterpret"; version="1.0.0"; sha256="0qldaqpx7kpk71zfwv465jrscwzc9w3xfv52i4h01k9aw3q6m8ja"; depends=[]; }; conflicted = derive2 { name="conflicted"; version="1.0.4"; sha256="0xp04cdvmp3b1phazhmjqn0vmax1b2218xsb5854ffv43m7qvrra"; depends=[memoise rlang]; }; + conflr = derive2 { name="conflr"; version="0.1.0"; sha256="1ppmg3n0r5wlnhw60lkbbfdakq3q79zf2vsnzh0wjmdb34w3p535"; depends=[askpass commonmark curl glue httr knitr miniUI purrr R6 rlang rmarkdown rstudioapi shiny stringi xml2]; }; conformalClassification = derive2 { name="conformalClassification"; version="1.0.0"; sha256="03v6xbgipb97byarqj0d38z9yb2g54mkkw343jxmi2j058z26yw7"; depends=[doParallel foreach mlbench randomForest]; }; confoundr = derive2 { name="confoundr"; version="1.2"; sha256="000vf828qv04pplx8yc8q3mafxf4g0axip6z5zbsj2581yxv9jjh"; depends=[dplyr ggplot2 gridExtra magrittr purrr rlang Rmpfr scales stringr tidyr]; }; - confreq = derive2 { name="confreq"; version="1.5.4-3"; sha256="1jn9v9z04a2yni4l3i7969kzzpgaxkdfdggi74dgp3jchda6vip7"; depends=[gmp]; }; + confreq = derive2 { name="confreq"; version="1.5.5-0"; sha256="1aww0i9mh08y05941di40f9jagy7s48rw0cs7w55gsyffl5yy1ir"; depends=[gmp]; }; congressbr = derive2 { name="congressbr"; version="0.2.2"; sha256="1br6bhfy0i0ashz9dpv63ag2d4yqvpl7ml82hsf15gjq6mwvr1nr"; depends=[dplyr glue httr janitor lubridate magrittr progress pscl purrr stringi stringr tibble tidyr xml2]; }; conicfit = derive2 { name="conicfit"; version="1.0.4"; sha256="1d704xgiyqmbwfxnsmhqg885x10q8yqxmrk4khqpg3lh696bw97d"; depends=[geigen pracma]; }; conics = derive2 { name="conics"; version="0.3"; sha256="06p6dj5dkkcy7hg1aa7spi9py45296dk0m6n8s2n3bzh3aal5nzq"; depends=[]; }; conjoint = derive2 { name="conjoint"; version="1.41"; sha256="1iq3226a6fn1gddmh2nxlzvjcvbj7502r9520g9d4xdmk8smfx33"; depends=[AlgDesign broom cluster fpc ggfortify ggplot2]; }; - conjurer = derive2 { name="conjurer"; version="1.0.0"; sha256="0mhdl6wwvdjgal0qagyqlfs7fa0fnm24hg452dmszy85crk832dm"; depends=[]; }; - connections = derive2 { name="connections"; version="0.1.0"; sha256="1jkk9s3w6d3751hb2y4d2lilndhpfs2alqgg6k23q7bav6848wyp"; depends=[DBI dbplyr dplyr pins rscontract uuid]; }; + conjurer = derive2 { name="conjurer"; version="1.1.0"; sha256="0pzc71prq1s2pfl2yvns8qgcgys140qrcy0glrflikpm4j71a54w"; depends=[]; }; + connections = derive2 { name="connections"; version="0.1.1"; sha256="08fbyzyp26nh1a46p0zi3q0wzgl0cd9bjp4lhw2bwv1bv7yayamp"; depends=[DBI dbplyr dplyr pins rscontract uuid]; }; conover_test = derive2 { name="conover.test"; version="1.1.5"; sha256="0f1p10klidk1xic1wd48j9rjh2fb3z6pfjx4y021lglx1w3av68k"; depends=[]; }; - conquestr = derive2 { name="conquestr"; version="0.3.7"; sha256="13pkbgw0z2icpc2l16g1wy92bbhmrk3l0jfhvh0sa8zj5idw35z1"; depends=[]; }; + conquestr = derive2 { name="conquestr"; version="0.5.1"; sha256="1ha2jxh4xi39w4cznbdbbdhq5s5csmbf4p4j7blr80g72b46jvcp"; depends=[Rcpp reshape]; }; constants = derive2 { name="constants"; version="0.0.2"; sha256="1j9d52riwx7v1ppfdw0x517j7xh92qgskd4mj5yk9qa233brcwyy"; depends=[]; }; constellation = derive2 { name="constellation"; version="0.2.0"; sha256="1d49rnyf2z3bvx158nsmgmb0x7xcgxl9f8y98pwg5wlqck7af99q"; depends=[data_table]; }; constrainedKriging = derive2 { name="constrainedKriging"; version="0.2.4"; sha256="1a91s0b7yka37fb5pm172fmlqrhm6da370cqb9knvkg5n8vi4hys"; depends=[RandomFields rgeos sp spatialCovariance]; }; - contact = derive2 { name="contact"; version="1.0.1"; sha256="16dqvfkdckd59yx48s3qv5iz1jn087v4m93yjzmmvv78agqdi1m2"; depends=[ape data_table geosphere igraph lubridate raster rgdal rgeos sf sp]; }; + contact = derive2 { name="contact"; version="1.2.0"; sha256="1kmfhr1s5p28wjkkbshcc2sr7rp6m1jpz6lkm8yfc790zn7ch42s"; depends=[ape data_table doParallel foreach geosphere igraph lubridate raster rgdal rgeos sf sp]; }; container = derive2 { name="container"; version="0.3.0"; sha256="128fj97mx52kap299fmhn3whnaismsd4cq3zqpbfvwxx2ii4fd33"; depends=[R6]; }; - contextual = derive2 { name="contextual"; version="0.9.8.2"; sha256="03123mghmixy9v2c5lqg0df5ycxa09mir94rkjgs8lp62ncq170r"; depends=[data_table doParallel foreach Formula iterators itertools R_devices R6 rjson]; }; + contextual = derive2 { name="contextual"; version="0.9.8.3"; sha256="0mpbbg13ba5lwsh6rcy5g8vbfycv3182bqkgw66rn3r8fvkmy516"; depends=[data_table doParallel foreach Formula iterators itertools R_devices R6 rjson]; }; contfrac = derive2 { name="contfrac"; version="1.1-12"; sha256="0sq5c7ny235yrkv2xc4insgxby6rvzc1qsj8h301cd2if3lwbgwm"; depends=[]; }; conting = derive2 { name="conting"; version="1.7"; sha256="08f271j3gxcp4shda08kkv0v9ayaadvxgcglfsn6hjmw4hn298zg"; depends=[BMS coda gtools mvtnorm tseries]; }; contoureR = derive2 { name="contoureR"; version="1.0.5"; sha256="1izq1alkf24zd2sf2ir2adyrkwhdj7n89cv6z0dfh5mfqld5bkdn"; depends=[geometry plyr Rcpp reshape]; }; @@ -6302,6 +6309,7 @@ in with self; { contribution = derive2 { name="contribution"; version="0.1.0"; sha256="06y6qa7c0zifg6fqfpwry4z367ckiyk9v09n8cqc6q98c3ddkwj3"; depends=[dplyr ggplot2 gh magrittr rlang tidyr]; }; control = derive2 { name="control"; version="0.2.5"; sha256="02s8h5kwpzfrivx3ign84gwlybkcs03ibawyxdny9zz5yhb7x3bs"; depends=[expm Matrix pracma signal]; }; controlTest = derive2 { name="controlTest"; version="1.1.0"; sha256="19r8nvi35ldzgayifskjj706fv76hv6sj68yvggybp27rgyqbjfl"; depends=[survival]; }; + convergEU = derive2 { name="convergEU"; version="0.4.1"; sha256="0ycp26h54acvhzivkp5065h3bmd6jg6v5giqjashj9lzpr8ixihc"; depends=[broom caTools devtools dplyr eurostat formattable ggplot2 ggpubr gridExtra kableExtra knitr magrittr purrr readr readxl rlang rmarkdown stringr tibble tidyr tidyverse]; }; convertGraph = derive2 { name="convertGraph"; version="0.1"; sha256="1jsrygj6ydzc0nzyzaq95j4blqavj7dqz182vgm1ckv8an3if0jx"; depends=[]; }; convertr = derive2 { name="convertr"; version="0.1"; sha256="1y9aq5in2qv1323amblmq3g22flpqvpkgkrw12kahg56mqf2b3iq"; depends=[DT miniUI rstudioapi shiny]; }; convevol = derive2 { name="convevol"; version="1.3"; sha256="1b0lygbrdm6rqascck5iwjnm248lklc4cxr71qlgand5jsblpcnn"; depends=[ape cluster geiger MASS phytools]; }; @@ -6319,13 +6327,12 @@ in with self; { coppeCosenzaR = derive2 { name="coppeCosenzaR"; version="0.1.3"; sha256="1chwsfyaf5rmlsypr43n7px8b2220dfa5mzcriq1swylgbx4181l"; depends=[]; }; coprimary = derive2 { name="coprimary"; version="1.0"; sha256="0pjln9p5lzv6wl5xrz0kb90hnjlnp7ch2kvh054nxdbmlxv5akc3"; depends=[digest gsDesign plyr proto]; }; cops = derive2 { name="cops"; version="1.0-2"; sha256="0ifp3cai490lw6dnyyjj4822x8g2mswhaamnw5ljwnxdbmjwhhrw"; depends=[cmaes cordillera crs dfoptim GenSA MASS minqa NlcOptim nloptr pso rgenoud rgl Rsolnp scatterplot3d smacof subplex]; }; - copula = derive2 { name="copula"; version="0.999-19.1"; sha256="0bk92fx71282dx0whwv4rsfchw7pm7axicrl3r6f3gm4rlldf68r"; depends=[ADGofTest colorspace gsl lattice Matrix mvtnorm numDeriv pcaPP pspline stabledist]; }; + copula = derive2 { name="copula"; version="0.999-20"; sha256="1c0gbjfhvm839cdmy7n15an9jg6qygdq8bvp9awhbjysway4fgbx"; depends=[ADGofTest colorspace gsl lattice Matrix mvtnorm numDeriv pcaPP pspline stabledist]; }; copulaData = derive2 { name="copulaData"; version="0.0-1"; sha256="1s917g8wasxndg1xq4b4fjaq29nyzzigpflgqcy4rxdb7r54dl0z"; depends=[]; }; copulaedas = derive2 { name="copulaedas"; version="1.4.3"; sha256="01wp8jnz7kndknj7lh9ia7mm41k1vbaksalyy9v19bb77yhgzmba"; depends=[copula mvtnorm truncnorm vines]; }; corHMM = derive2 { name="corHMM"; version="1.22"; sha256="03di9250hjn5fiwn47f0pr4zprmsza4if3xpmy3j1czahc8zlqnj"; depends=[ape corpcor expm GenSA nloptr nnet numDeriv phangorn Rmpfr]; }; corTest = derive2 { name="corTest"; version="0.9.8"; sha256="03dhy84a7caf030br9ybr5zxfq49y72gwj462ay245b09k4f2v3r"; depends=[MASS]; }; corTools = derive2 { name="corTools"; version="1.0"; sha256="0arvqk2xp19ap73zmdk0kb1fycb3v2mf65b4bhanvcqwr4kg4vdk"; depends=[]; }; - corclass = derive2 { name="corclass"; version="0.1.1"; sha256="0ai8si992f58mrvc8hq598zbw9d4jslnc96lpzj5d89lljjv3hf5"; depends=[igraph]; }; cord = derive2 { name="cord"; version="0.1.1"; sha256="18xj6cwmx1a7p3vqx5img8qf8s75nc6pcv78v15j081pgn786ma5"; depends=[Rcpp RcppArmadillo]; }; cordillera = derive2 { name="cordillera"; version="0.8-0"; sha256="0cpysfivwmim36gcqn1i7450a33hv4pdbvil7syb0hr7vdm083dd"; depends=[dbscan yesno]; }; coreCT = derive2 { name="coreCT"; version="1.3.2"; sha256="0xxcgd5qar9fwhyzs5g3fc45naca4xmcgmw88ygav02vv5y93w03"; depends=[igraph oro_dicom plyr raster]; }; @@ -6335,11 +6342,12 @@ in with self; { corehunter = derive2 { name="corehunter"; version="3.2.1"; sha256="0cxvhmi768kz3q8hydb6y9nqvc8hvkmq8nc5yfry4k94whk12wax"; depends=[naturalsort rJava]; }; corkscrew = derive2 { name="corkscrew"; version="1.1"; sha256="1nb81r4lsrajcj3xz3f7p6xznnb38yg3rnnh44rd3kabca4d8r1s"; depends=[ggplot2 gplots igraph RColorBrewer]; }; corlink = derive2 { name="corlink"; version="1.0.0"; sha256="06n9pcvbn8y9gy0mn9c0sw05424ss8smpaw3ly6a785cmj3d9b6m"; depends=[]; }; - cornet = derive2 { name="cornet"; version="0.0.3"; sha256="0f0fwyz2kp59xb4a7kxa66h0y9940fba56dlyncin5szr5nhfrpp"; depends=[glmnet palasso]; }; + cornet = derive2 { name="cornet"; version="0.0.4"; sha256="0chp7ifcc0a9dz6ang4wjiwj7q309g9nsgyql6qmml985d8bazcy"; depends=[glmnet palasso]; }; coroICA = derive2 { name="coroICA"; version="1.0.1"; sha256="0hjy1sdii8kk859bj1xv3vh1hzxznhymhgdb583z57i0hqxnijiv"; depends=[MASS]; }; + coronavirus = derive2 { name="coronavirus"; version="0.1.0"; sha256="19im0kb6pv8czbq3h675nhfa1r6jj9whi2mq2wi3ldnzfa925bqw"; depends=[]; }; corpcor = derive2 { name="corpcor"; version="1.6.9"; sha256="1hi3i9d3841snppq1ks5pd8cliq1b4rm4dpsczmfqvwksg8snkrf"; depends=[]; }; corpora = derive2 { name="corpora"; version="0.5"; sha256="0b4yw37msx9h8hf5mjs4h10gdmc1qc2gv5bzyj1r90n4gcli042d"; depends=[]; }; - corporaexplorer = derive2 { name="corporaexplorer"; version="0.8.0"; sha256="0rn35wqi4bb90k440dk1sm862azx3pfgc2d6z489fdqq7xsjnk3a"; depends=[data_table dplyr forcats ggplot2 lubridate magrittr padr plyr RColorBrewer re2r rlang rmarkdown scales shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringi stringr tibble tidyr zoo]; }; + corporaexplorer = derive2 { name="corporaexplorer"; version="0.8.2"; sha256="14l64mcqfa2ayyl6d48s9fc2qh485wk02s23cy4nssn7sg1b3a5z"; depends=[data_table dplyr ggplot2 lubridate magrittr padr plyr RColorBrewer rlang rmarkdown scales shiny shinydashboard shinyjs shinyWidgets stringi stringr tibble tidyr]; }; corpus = derive2 { name="corpus"; version="0.10.0"; sha256="0c984rsnbai2qrm2s10lkdfgx31m0ax46zhl74bns2bxfmagcn3l"; depends=[utf8]; }; corpustools = derive2 { name="corpustools"; version="0.4.2"; sha256="00v61i4c43s69mchy5zkbxgvxjx8kqlzm2vcb7snjblmd84w4id5"; depends=[data_table digest igraph Matrix quanteda R6 Rcpp RcppProgress RNewsflow SnowballC stringi tokenbrowser udpipe wordcloud]; }; corr2D = derive2 { name="corr2D"; version="1.0.0"; sha256="12k6vbqyb33kfj2xdg8rbydnp2yk15kv4b0m4lid4gf2lqmy3jwz"; depends=[colorspace doParallel fields foreach mmand profr rgl xtable]; }; @@ -6347,14 +6355,15 @@ in with self; { corrcoverage = derive2 { name="corrcoverage"; version="1.2.1"; sha256="0r5n2g341jlinwrxxwxkav9i6qsf097pmfi07aiq663b13r3864x"; depends=[data_table magrittr matrixStats Rcpp RcppArmadillo]; }; correctedAUC = derive2 { name="correctedAUC"; version="0.0.3"; sha256="0c2kq7asq5mp48p8niqb84wnw4q2q2985wxbrywrhsszm9p3xspb"; depends=[ICC mnormt]; }; corregp = derive2 { name="corregp"; version="2.0.2"; sha256="1v048dibn2x3y5mi2damcsr9i5kdig5n53g5j9gf31lqkzzjmnh3"; depends=[data_table diagram ellipse gplots rgl]; }; + correlation = derive2 { name="correlation"; version="0.1.0"; sha256="0idhw015s1a84z87mzy35rly700bd2mgsp3g9943c5yxnda2g17z"; depends=[bayestestR boot effectsize insight parameters]; }; correlationfunnel = derive2 { name="correlationfunnel"; version="0.1.0"; sha256="0kg770nfr1cd31b8y8g1kx046k401lha9hbj7lq543gl7s77aw2x"; depends=[cli crayon dplyr forcats ggplot2 ggrepel magrittr plotly purrr recipes rlang rstudioapi stringr tibble tidyr]; }; correlbinom = derive2 { name="correlbinom"; version="0.0.1"; sha256="1ix3ccxzr7vqblbda5awsva3h95b69v7kc6adz622bbi8r36xxcq"; depends=[Rmpfr]; }; corrgram = derive2 { name="corrgram"; version="1.13"; sha256="1g5159vihsz5a2cfmg4g4i1lildn2x2wzck5sd0vml5810rxjpma"; depends=[seriation]; }; corrplot = derive2 { name="corrplot"; version="0.84"; sha256="1k03qd8db7pwg1v318xapx5mpiypiz2n07qr19c4b45diri5xkhd"; depends=[]; }; - corrr = derive2 { name="corrr"; version="0.4.0"; sha256="0zjqkgsnwgcyi8hdskr7in0liqhpj9qml96agawzj11iy0bf6387"; depends=[dplyr ggplot2 ggrepel purrr rlang seriation tibble]; }; + corrr = derive2 { name="corrr"; version="0.4.1"; sha256="1vyakqfdm0dh1scwi395008hvzmyb53vxcjxx0hx0kfknqara8nn"; depends=[dplyr ggplot2 ggrepel purrr rlang seriation tibble]; }; corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; }; corset = derive2 { name="corset"; version="0.1-4"; sha256="0ladyqvkys4cldvbhkii9jwn1k5p1ym2g5bgdlz1hq1sv30ixn2f"; depends=[]; }; - corto = derive2 { name="corto"; version="0.99.10"; sha256="0ss28d0fi30waywgz47j7vxqqxxgiixk4qandlvaxjyik3yy0n4g"; depends=[dplyr knitr pbapply rmarkdown]; }; + corto = derive2 { name="corto"; version="1.0.5"; sha256="042bz48qiwkhms5ad6189dlng91nz6mdfwjar7816ry7vzfn92iw"; depends=[dplyr knitr pbapply plotrix rmarkdown]; }; corx = derive2 { name="corx"; version="1.0.2"; sha256="1k9k1w5i5yky6c9jn5s80rf0r5r6qn7w0xwamjbankp2i4ryna5z"; depends=[clipr crayon ggcorrplot glue moments ppcor psych tidyselect]; }; cosa = derive2 { name="cosa"; version="2.0.0"; sha256="1ra1m75ay829xlhjax82px4ffflnfgh2mrmzzj4i8ml545d9hmgr"; depends=[msm nloptr]; }; cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; }; @@ -6372,7 +6381,7 @@ in with self; { countcolors = derive2 { name="countcolors"; version="0.9.1"; sha256="1gnwmw3inh8asbk6qba34vzx1k2cnh4m9d1346gxhzhlxvl6xiza"; depends=[colordistance jpeg png]; }; countfitteR = derive2 { name="countfitteR"; version="1.0"; sha256="1kb7na35xk257a6bd9ihgbn13ygn5s553s9nph0hg7iw5nikknap"; depends=[ggplot2 MASS shiny]; }; countgmifs = derive2 { name="countgmifs"; version="0.0.2"; sha256="0k6fjg0v9n7vi89wd025gdjh1q3l6nnc5yn8i2bfw0i5vmv8rhi3"; depends=[MASS]; }; - countrycode = derive2 { name="countrycode"; version="1.1.0"; sha256="1pmv2jxr1ydgv8r5n20s5z80hdmzgvhm4cxdqhbkf7nfyipwl8xl"; depends=[]; }; + countrycode = derive2 { name="countrycode"; version="1.1.1"; sha256="1ys76s1sa6xj0mr5kryscwsh3dlrn9w35fx3fnr325j35xalyka4"; depends=[]; }; countyfloods = derive2 { name="countyfloods"; version="0.1.0"; sha256="0ld8p8dfk9khvwffbn8sad0j3an25s7cvbi6jxljgx4zc6ldh699"; depends=[dataRetrieval dplyr ggplot2 lubridate maps plyr R_utils tidyr]; }; countytimezones = derive2 { name="countytimezones"; version="1.0.0"; sha256="0sk22fmz9d3wvlfvjl1xdavvl04q1ywy8ww2gi5am3yiizkf0v9w"; depends=[dplyr lubridate]; }; countyweather = derive2 { name="countyweather"; version="0.1.0"; sha256="0q56bnh9x6jyj1sdd1q4yv2n774mbv268pgp285bjybgqm2pyisz"; depends=[dplyr geosphere ggmap ggplot2 lubridate purrr raster rnoaa sp stringi tibble tidyr tigris]; }; @@ -6381,17 +6390,17 @@ in with self; { covRobust = derive2 { name="covRobust"; version="1.1-3"; sha256="0zcfala4l0j4w0sx5hlw40vxiypans3d7pgkxy25nj0d2m1jkvba"; depends=[]; }; covTestR = derive2 { name="covTestR"; version="0.1.4"; sha256="0j9kay8lwkhpdyg0fbfars1m58v0i58v1v5sm7m72s7kz8qh2yfs"; depends=[purrr Rcpp RcppArmadillo rlang]; }; covafillr = derive2 { name="covafillr"; version="0.4.4"; sha256="1vsay0qlqcw3l6xp18rxrkhwsadsv9rpxwpj9f4d3vlr8inkiv4h"; depends=[Rcpp RcppEigen]; }; - covatest = derive2 { name="covatest"; version="1.1.1"; sha256="0fnm3ljk4my3xinv0qswi57l51z0j6cva7by00p8f5992hhk3sn9"; depends=[gstat lubridate matrixcalc sp spacetime zoo]; }; - coveffectsplot = derive2 { name="coveffectsplot"; version="0.0.4"; sha256="0lx42f86w5z7i0p2z5kwrm8rbcm4vriaagfhpixc8n7aq6mkb7bl"; depends=[colourpicker dplyr egg ggplot2 ggstance markdown shiny shinyjs tidyr]; }; + covatest = derive2 { name="covatest"; version="1.1.2"; sha256="08cff9ppw94r7bicgc4hrcgymslgn390hw26z7xnhdgfj7swq1nn"; depends=[gstat lubridate matrixcalc sp spacetime zoo]; }; + coveffectsplot = derive2 { name="coveffectsplot"; version="0.0.5"; sha256="1g04js4jl1dbm6fyk2dpny91hz5axvfzi36jswn9z1vmzd2syrxy"; depends=[colourpicker dplyr egg ggplot2 ggridges ggstance markdown shiny shinyjs tidyr]; }; covequal = derive2 { name="covequal"; version="0.1.0"; sha256="1qj6djqf1rnjmnaz1nryj9dc104082w258dzjjp5q18gg1ck8v0c"; depends=[corpcor RMTstat]; }; covfefe = derive2 { name="covfefe"; version="0.1.0"; sha256="178qc77y4bn04qad3g70wr8y4v0ggyg807w67m8wvhbcxqr8yq7c"; depends=[tokenizers]; }; - covglasso = derive2 { name="covglasso"; version="1.0"; sha256="1i5k61jivmipzpk53hpab9vnc57rnyl24jy503lnk5r1plb9w93i"; depends=[Rcpp RcppArmadillo]; }; - covr = derive2 { name="covr"; version="3.4.0"; sha256="0p44kr6yz5sqza5zvq6divqglzkpv0if9pjpjmzhmdaaddjrqzg5"; depends=[crayon digest httr jsonlite rex withr yaml]; }; + covglasso = derive2 { name="covglasso"; version="1.0.1"; sha256="1wyh5f7rhwrk042wcr31db4v0wpd12kxwfg1qqszdg3jq6xbyz25"; depends=[Rcpp RcppArmadillo]; }; + covr = derive2 { name="covr"; version="3.5.0"; sha256="1pvr95h7jg9hqq1qq1cccy323pkxldrwafl08151cc410499k4fb"; depends=[crayon digest httr jsonlite rex withr yaml]; }; covreg = derive2 { name="covreg"; version="1.0"; sha256="0v19yhknklmgl58zhvg4szznb374cdh65i7s8pcj2nwrarycwzaq"; depends=[]; }; covsep = derive2 { name="covsep"; version="1.1.0"; sha256="19dvwhl85yx9ddwxvnq5sdd534s6llcw61gckrav48hq49x1bqld"; depends=[mvtnorm]; }; cowbell = derive2 { name="cowbell"; version="0.1.0"; sha256="1zz0g30zvqfk5lh09y90iq3s7x2wwbs852i3d56mfp926gxdxc2y"; depends=[ggplot2 misc3d rgl]; }; cowplot = derive2 { name="cowplot"; version="1.0.0"; sha256="19cqdhgfyr1wj0fz0c5ly8f0aiy9sfgzq6lzb78hkx0hdp2agybh"; depends=[ggplot2 gtable rlang scales]; }; - cowsay = derive2 { name="cowsay"; version="0.7.0"; sha256="1f5hc1sj79yd3l2c6vrcj6xx2hdfxb16c3d2sgr7yps8j5fyrb9h"; depends=[crayon fortunes rmsfact]; }; + cowsay = derive2 { name="cowsay"; version="0.8.0"; sha256="12hximrdpikkczpwqjmah11nbwzyf7j1x7zcxa7igqwq8nfgv2yv"; depends=[crayon fortunes rmsfact]; }; coxed = derive2 { name="coxed"; version="0.3.2"; sha256="1pj0w7a40zmnsmvlqi8kxa4psyijqwwjyjmvcvbs9xylqlwna6ih"; depends=[dplyr ggplot2 gridExtra mgcv PermAlgo rms survival tidyr]; }; coxinterval = derive2 { name="coxinterval"; version="1.2"; sha256="0vb7vmzbb2dsihx04jbp2yvzcr033g435mywmwimqhfqdrmjx3fi"; depends=[Matrix survival timereg]; }; coxme = derive2 { name="coxme"; version="2.2-16"; sha256="04aid8v0y2afwwbfm39np1pgdla4jw427gy2wazsphf495b4pkm0"; depends=[bdsmatrix Matrix nlme survival]; }; @@ -6402,7 +6411,7 @@ in with self; { coxphw = derive2 { name="coxphw"; version="4.0.1"; sha256="116dp6zispa8k7y6jrn4v9ipf0jqdhj68w9qqc2qwcapawvrd0nh"; depends=[survival]; }; coxrobust = derive2 { name="coxrobust"; version="1.0"; sha256="08hp0fz5gfxgs3ipglj6qfr6v63kzxkrzg650bmzabq8dvrxd97q"; depends=[survival]; }; coxrt = derive2 { name="coxrt"; version="1.0.3"; sha256="1xggczjx5psl4m4m83vh4y6swnh3pf9rngnzx3268iznfz1g43h2"; depends=[BB ggplot2 gss inline Rcpp RcppArmadillo survival]; }; - coxsei = derive2 { name="coxsei"; version="0.1"; sha256="1agr0gmyy1f2x6yspj04skgpi1drpbc1fcbwhhhjsz1j6c64xagy"; depends=[]; }; + coxsei = derive2 { name="coxsei"; version="0.3"; sha256="1k3xsjwv1ji8n2qry2j93svr8a114mxkdl5y2zwz7mp82dmv0ld6"; depends=[]; }; cp4p = derive2 { name="cp4p"; version="0.3.6"; sha256="1zddkkj0ynvfck3kw1682wffbxw0d3dc4flmxxp03lclq70fc8bd"; depends=[limma MESS multtest qvalue]; }; cpa = derive2 { name="cpa"; version="1.0"; sha256="14kcxayw4cdbjfa6bvfzqp8flwc0sr3hmh2dnr1dfax0hnccd71m"; depends=[]; }; cpca = derive2 { name="cpca"; version="0.1.2"; sha256="1pccsjahb1qynnxa0akhfpcmhfmdg4rd1s6pfqrdl7bwbcmq4lqf"; depends=[]; }; @@ -6436,10 +6445,10 @@ in with self; { crblocks = derive2 { name="crblocks"; version="1.0-0"; sha256="0y101kgi7ryjv18fyjp0ralp4qj7kgshmbd4mf7n3hdjay0znss5"; depends=[]; }; crch = derive2 { name="crch"; version="1.0-4"; sha256="18qjvh1lkw1f6rrhnb21f30xxrcq8whbs3x1jgkw6q14rf1483ri"; depends=[Formula ordinal sandwich scoringRules]; }; credentials = derive2 { name="credentials"; version="1.1"; sha256="0izwskymymkxdwsdj7zapqpkc6g37c0m6c2na0y00s1kwr73d2qd"; depends=[askpass curl jsonlite openssl sys]; }; + creditmodel = derive2 { name="creditmodel"; version="1.1.8"; sha256="1l9l56cs9kh22j8ky2iklakwsw69j89gb6kz57yklj2sj543hzir"; depends=[cli data_table doParallel dplyr foreach ggplot2 glmnet rpart xgboost]; }; credsubs = derive2 { name="credsubs"; version="1.0.1"; sha256="0n3684fxknvvs57g2vjqykgdjfbpl6242nd23sm9nv2fn57q8k2c"; depends=[]; }; credule = derive2 { name="credule"; version="0.1.3"; sha256="1vciqkxkf93z067plipvhbks9k9sfqink5rhifzbnwc2c5gxp5mx"; depends=[]; }; cregg = derive2 { name="cregg"; version="0.3.0"; sha256="08dhn4i5i27zw3ayqp7lkw5z8dzckv8fhflpvz0mphax34pm3z72"; depends=[ggplot2 ggstance lmtest sandwich scales survey]; }; - crevents = derive2 { name="crevents"; version="0.1.0"; sha256="0f8xa2dn1896523am61k1ajqgmn8v6k772van6d0lajlz7crmw2c"; depends=[crul jsonlite tibble]; }; crfsuite = derive2 { name="crfsuite"; version="0.3"; sha256="10mify8y1f6iwfckfrhhhw6j01p1cd9bq5xwcyz121wkfhnny6rx"; depends=[data_table Rcpp]; }; cricketr = derive2 { name="cricketr"; version="0.0.22"; sha256="10dfzm297knwcqnznsprrwgrfa83hxqvr3px9mdgqj9q97c2bn3b"; depends=[dplyr forecast ggplot2 lubridate plotrix scatterplot3d XML]; }; crimCV = derive2 { name="crimCV"; version="0.9.6"; sha256="14ckk88i7jk8a7kl51d7qfdis44jng6zz9zd72cdp80a57dvrvzq"; depends=[]; }; @@ -6447,8 +6456,8 @@ in with self; { crimelinkage = derive2 { name="crimelinkage"; version="0.0.4"; sha256="1zzk50kyccvnp51vzp28c9yi23hsp25arrgdn88lwfwa0m43rlar"; depends=[geosphere igraph]; }; crisp = derive2 { name="crisp"; version="1.0.0"; sha256="1gs8jnd9y9pd55w6kwv9mvmg3wd8hjiw3lwx7k242pxccsxklfxq"; depends=[MASS Matrix]; }; crmPack = derive2 { name="crmPack"; version="1.0.0"; sha256="11zy1ci9d0zjbmc0gws9j9qrnfcqvky1ws9p41wjn0zifcckc5gi"; depends=[GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; - crminer = derive2 { name="crminer"; version="0.2.0"; sha256="1rlh7bxk8bry2v9fnqzy0ph62dda1pzifksr7v4pmdyhji9mjw33"; depends=[crul hoardr jsonlite pdftools xml2]; }; - crmn = derive2 { name="crmn"; version="0.0.20"; sha256="1kl1k1s2gm63f9768cg8w4j6y1gq4hws3i7hdfhj7k9015s0a25p"; depends=[Biobase pcaMethods]; }; + crminer = derive2 { name="crminer"; version="0.3.0"; sha256="03ynpnk3ni0l2cdlfk69vm1swlva0wjm7lnrb7b1dl9xdjr57lzn"; depends=[crul hoardr jsonlite pdftools xml2]; }; + crmn = derive2 { name="crmn"; version="0.0.21"; sha256="0wp99fsw7y859gp1x22f77r9rv1m0xspbzhzgshzf7hi86xb57k5"; depends=[Biobase pcaMethods]; }; crn = derive2 { name="crn"; version="1.1"; sha256="1fw0cwx478bs6hxidisykz444jj5g136zld1i8cv859lf44fvx2d"; depends=[chron RCurl]; }; crochet = derive2 { name="crochet"; version="2.2.0"; sha256="1cbv79nyycxk6f8ldcsnn2pvgxqlnrj0qs19nhafnq2clxy863k6"; depends=[]; }; cromwellDashboard = derive2 { name="cromwellDashboard"; version="0.5.1"; sha256="0d57c1wdd1ds9fr7p256la63qbv8mirljgrvl1k8fp5gcnkps5wb"; depends=[dplyr DT httr shiny shinydashboard stringr]; }; @@ -6460,7 +6469,7 @@ in with self; { crossdes = derive2 { name="crossdes"; version="1.1-1"; sha256="1d7lv3ibq1rwxx8kc3ia6l9dbz2dxdd5pnf2vhhjmwm448iamcfd"; depends=[AlgDesign gtools]; }; crossmatch = derive2 { name="crossmatch"; version="1.3-1"; sha256="082lrv2129mfhwlh99z3g8id3a29s8854skl152bl3ig8pk2gbjz"; depends=[nbpMatching survival]; }; crossrun = derive2 { name="crossrun"; version="0.1.0"; sha256="0br57nraqhs5f1cpidc8kd31izm82wvhiw9pxcdj9v51l9vifbmx"; depends=[Rmpfr]; }; - crosstalk = derive2 { name="crosstalk"; version="1.0.0"; sha256="0lfa89vhrzi7a1rghmygcjr8gzddw35sinb3jx6g49mc9jias7mk"; depends=[ggplot2 htmltools jsonlite lazyeval R6 shiny]; }; + crosstalk = derive2 { name="crosstalk"; version="1.1.0.1"; sha256="03ihj7cimkklrbad9zic78xsrfcisygmgy859hqnx0hiph80p9rn"; depends=[htmltools jsonlite lazyeval R6]; }; crossval = derive2 { name="crossval"; version="1.0.3"; sha256="0acpcisg6pkxblyc4j9hiri58h1rn7ay43p5ib5ia8a4a8bnfa4p"; depends=[]; }; crosswalkr = derive2 { name="crosswalkr"; version="0.2.6"; sha256="1rxd6vy7vdrawmg7zkydl1f2wwklnzgh9dsnxbg966xrr3l9x1n9"; depends=[haven labelled readr readxl tibble]; }; crossword_r = derive2 { name="crossword.r"; version="0.3.6"; sha256="1s31613s4qxxspka9bhgq3rq8xraf48mwfv6phvz6v06gijh64lr"; depends=[dplyr jsonlite magrittr R6 r6extended stringr]; }; @@ -6475,14 +6484,15 @@ in with self; { crs = derive2 { name="crs"; version="0.15-31.1"; sha256="1p16nnxskjf3fdrdm5y1n5zj0acyrmc73ff75rgry1b1fd4yk61x"; depends=[boot np quantreg rgl]; }; crseEventStudy = derive2 { name="crseEventStudy"; version="1.2"; sha256="1fgjj78p54fk0bkvx0fq1h7c5j4c64g10cdjzmmqhhxlyjwp5z7y"; depends=[sandwich]; }; crskdiag = derive2 { name="crskdiag"; version="1.0.1"; sha256="0100wbyvchx6jwlrwc6rwhdjanips5c0f5zqzs2c0dgwygpqw30w"; depends=[cmprsk]; }; + crsmeta = derive2 { name="crsmeta"; version="0.1.7"; sha256="14g89fkpw9zslg08kpkq08k7yi1wam9xzd5b7f8bik4mbrdziz4r"; depends=[]; }; crsnls = derive2 { name="crsnls"; version="0.2"; sha256="0rv0xrdl9ix6bhaf554gma8zf923w47f8j1dkbs8g6xjqjr1c40a"; depends=[]; }; crso = derive2 { name="crso"; version="0.1.1"; sha256="1r10vz8z5y52a5v5phw22fhqwv9p7g66xfsx0906bcx74dn3f2b3"; depends=[foreach]; }; crsra = derive2 { name="crsra"; version="0.2.3"; sha256="1rkqm88zmvp9gw442cby6qpvfw4pfw65wz0gyl2h37w87c3wwvrw"; depends=[digest dplyr knitr purrr rcorpora readr tibble tidytext]; }; crtests = derive2 { name="crtests"; version="0.2.1"; sha256="0z8idz37dgwvi1q2vryldii7fn9yxd32gds77ml76jfplxbkikpd"; depends=[caret plyr stringr]; }; crul = derive2 { name="crul"; version="0.9.0"; sha256="1h1iyp625x2fx22dai9y0pmg64q65p9iiilkkd0qlr1ir9ljrd57"; depends=[curl httpcode jsonlite mime R6 urltools]; }; - crunch = derive2 { name="crunch"; version="1.26.1"; sha256="01ajcvn31nb8cdmqmalmxvp1pvh7nmd9fyg2fc1zm7yy3a2klp9l"; depends=[crayon curl httpcache httr jsonlite]; }; + crunch = derive2 { name="crunch"; version="1.26.3"; sha256="1hnzx9kc0h1x9pjpq9vmdk79vxqwwgh1ncskj9zvmjdmbaj6vyj3"; depends=[crayon curl httpcache httr jsonlite]; }; crunchy = derive2 { name="crunchy"; version="0.3.1"; sha256="1qvwzym2hj61zjlm7j34j8jl5kfpkpx35xfjjyl5y35a5y50sz8g"; depends=[crunch httpcache miniUI rstudioapi shiny]; }; - cruts = derive2 { name="cruts"; version="0.5"; sha256="08mklbmwgaq6cf3hd40mingplwjss5im30l5j6nmy7lijp15nq7k"; depends=[lubridate ncdf4 raster sp stringr]; }; + cruts = derive2 { name="cruts"; version="1.1"; sha256="1ih6h9qk4yflzars00d61smjqj7s4bfvc2ikp6vlki9f6k012xcx"; depends=[lubridate ncdf4 raster sp stringr]; }; crypto = derive2 { name="crypto"; version="1.1.3"; sha256="0n8b5cp7fp65zp99i8mr6gxi4w0m0l9pyjzq572p2fd8pss1g5nr"; depends=[cli crayon curl dplyr httr jsonlite lubridate progress reshape2 rstudioapi rvest tibble tidyr xml2 xts]; }; cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; }; csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; }; @@ -6490,28 +6500,31 @@ in with self; { csampling = derive2 { name="csampling"; version="1.2-2.1"; sha256="0kqx7j96yafsqi9cz551fqpwkbcabxl8zpwa2jms862z41xbgsv3"; depends=[marg statmod survival]; }; cshapes = derive2 { name="cshapes"; version="0.6"; sha256="0mp6grkibmqk4k1yi4w2sglpp9ari5cfw4iip49a0z58qa98npw7"; depends=[maptools plyr sp]; }; csn = derive2 { name="csn"; version="1.1.3"; sha256="102w1qh9hgz4j9lh5hnbw1z3b7p034si73q4pkk564a2mhzlksw4"; depends=[mvtnorm]; }; - csodata = derive2 { name="csodata"; version="0.1.5.0"; sha256="0qngazgky4nzcvz994652291dk2jizqykxjmqf0j3cv6wgsrhfrz"; depends=[dplyr httr jsonlite R_cache reshape2 rjstat sf]; }; + csodata = derive2 { name="csodata"; version="1.0.1.1"; sha256="1aldw10cjqz9563v5d4i1m4jb7pfimada3sdhwxkzsqqylvh6chg"; depends=[dplyr httr jsonlite R_cache reshape2 rjstat sf]; }; csp = derive2 { name="csp"; version="0.1.0"; sha256="1pc5mcn9difpp4cmfb0a8pqhbpkfakxjkbr7bpqmfiwcfk8rzr1h"; depends=[]; }; csrplus = derive2 { name="csrplus"; version="1.03-0"; sha256="0kljndmiwblsvvdnxfywida9k0dmdwjq63d934l5yl6z7k4zd0xa"; depends=[sp]; }; cssTools = derive2 { name="cssTools"; version="1.0"; sha256="1p8c21c1hilmd9ibqyz493fy1x95hb2pidybsyicch53gkb542br"; depends=[sna]; }; cstab = derive2 { name="cstab"; version="0.2-2"; sha256="1lr401fvi88f4jv8jh4brx95ymncfw8clripz1r6a46inj80nj4j"; depends=[cluster fastcluster Rcpp]; }; cstar = derive2 { name="cstar"; version="1.0"; sha256="1zws4cq5d37hqdxdk86g85p2wwihbqnkdsg48vx66sgffsf1fgxd"; depends=[]; }; - csv = derive2 { name="csv"; version="0.5.4"; sha256="019hagmz68bg10x4ykbr67i5dx7277pxdsqlvq06fzlf47kgizm5"; depends=[]; }; + csv = derive2 { name="csv"; version="0.5.5"; sha256="1i5apqdljr201jqd3r7mdlxczwfj9kz5b6k2myjalisgrgwgy642"; depends=[]; }; csvread = derive2 { name="csvread"; version="1.2.1"; sha256="1r9jvf7nbkxgl6dycdnb89yh39vacrzy8z04g8qz225rklg5b288"; depends=[]; }; csvy = derive2 { name="csvy"; version="0.3.0"; sha256="0id015szw1c63vd1h0515jsqdhyn32sxpxm89f3sb1qkgq3yynmy"; depends=[data_table jsonlite yaml]; }; + ctDNAtools = derive2 { name="ctDNAtools"; version="0.4.0"; sha256="0apdz3dv6snlshiq314clkpqycppd3mmyq4skyd1bdrbycnm5s96"; depends=[assertthat BiocGenerics Biostrings BSgenome dplyr ellipsis furrr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr purrr rlang Rsamtools tidyr VariantAnnotation]; }; + ctgt = derive2 { name="ctgt"; version="1.0"; sha256="0iznqskyi80xs8xn2hrrlal9qz9cwq6m9ml6wfwyynbzgn7vmvvh"; depends=[BH Rcpp]; }; cthreshER = derive2 { name="cthreshER"; version="1.1.0"; sha256="18b66d08dq8pvnixmm4ir4r800b37z5yillaa88l317mdilbci9s"; depends=[Matrix]; }; ctl = derive2 { name="ctl"; version="1.0.0-4"; sha256="027cij4vdsq3xhi38izzn07q6xwja7n8v95l7kk1pp92y9qkvqv3"; depends=[MASS qtl]; }; ctmcd = derive2 { name="ctmcd"; version="1.4.1"; sha256="01nflgdyb70kh4f8bnxpavr31fz4fh02kgz2nlx3zzblnm2idbcx"; depends=[coda expm numDeriv Rcpp RcppArmadillo]; }; ctmcmove = derive2 { name="ctmcmove"; version="1.2.9"; sha256="1pxyxbbhfa8arqfb7qw10ya1b8hy9ylqbqqzys6d9dsixvdk98h0"; depends=[fda gdistance Matrix raster sp]; }; ctmle = derive2 { name="ctmle"; version="0.1.2"; sha256="0qc1ji8fjpr88dn6mrpijfcx1ij4zkrxsbcw405hxal7rli0gyp3"; depends=[glmnet SuperLearner tmle]; }; ctmm = derive2 { name="ctmm"; version="0.5.8"; sha256="17bqq67pwkkdmhv45n85w6y2n59vgaf5zhma2bhq1bn6dimgf1dq"; depends=[data_table digest expm fasttime Gmedian gsl manipulate MASS numDeriv pbivnorm pracma raster rgdal shape sp]; }; - ctqr = derive2 { name="ctqr"; version="1.0"; sha256="1q4icv8qicgwr664cbrmkh2x9xmlrc80yvz8gnaqh86248kn4yp3"; depends=[pch survival]; }; + ctqr = derive2 { name="ctqr"; version="1.1"; sha256="1iv6mms7p0xca91mpj61cj8kxv2bwqrpvwdsbx2lk6hgys8g70y2"; depends=[pch survival]; }; ctrdata = derive2 { name="ctrdata"; version="1.2"; sha256="146nb5sv6mj43kqs8iz58nzyx4xrrk5khay2hjjpfrh1g076bw8k"; depends=[clipr curl httr jsonlite nodbi rvest xml2]; }; ctrlGene = derive2 { name="ctrlGene"; version="1.0.1"; sha256="0x7j11v7jj4k1jml6lrnjq79awhrvsm3pig1yxsd337jlfml3ra9"; depends=[psych]; }; - ctsem = derive2 { name="ctsem"; version="3.0.9"; sha256="0kkkyvmdz43npgh2xx4dsr0s02xj6x9d89rahqn2h0560qjd1059"; depends=[BH cOde data_table Deriv ggplot2 MASS Matrix mize mvtnorm numDeriv OpenMx pkgbuild plyr quantreg Rcpp RcppEigen rstan rstantools StanHeaders]; }; + ctsem = derive2 { name="ctsem"; version="3.1.1"; sha256="0l45bfvjjy4ak5bg6nfj8i9adl3qy79nllb0ldmhmg0wqxw76zs4"; depends=[BH cOde data_table Deriv ggplot2 MASS Matrix mize mvtnorm numDeriv OpenMx pkgbuild plyr quantreg Rcpp RcppEigen rstan rstantools StanHeaders]; }; ctv = derive2 { name="ctv"; version="0.8-5"; sha256="0kl6z8dbbjgm29q0c5xy6lihjgf5cdihrllm27x0zbcvy8lyl51p"; depends=[]; }; cuRe = derive2 { name="cuRe"; version="1.0.0"; sha256="0bdj3ak1s6rg84d82iy95g1sdanl6y5a4rdsnixqzrhb9kvnrv0s"; depends=[date numDeriv relsurv rootSolve rstpm2 statmod survival]; }; cubature = derive2 { name="cubature"; version="2.0.4"; sha256="0jpyq8j7x06dpiz29w48av879ygldzgls9z810192hsymkmfaz6r"; depends=[Rcpp]; }; + cubelyr = derive2 { name="cubelyr"; version="1.0.0"; sha256="0h9s5j9q05bdzdv7dbghzfbhqf96kyxyrxx1mqf8phzc77w4yh25"; depends=[dplyr glue pillar purrr rlang tibble tidyselect]; }; cubeview = derive2 { name="cubeview"; version="0.2.0"; sha256="1352hi2j9x9rx4iy3xvsca86nsh39x1vnymd17f5qc8c3plfm8db"; depends=[base64enc htmltools htmlwidgets lattice raster stars viridisLite]; }; cubfits = derive2 { name="cubfits"; version="0.1-3"; sha256="0i2iybm9vpyqnahzka66yms1namdd36bz1i1yjy74qsc1h995rga"; depends=[coda foreach]; }; cubing = derive2 { name="cubing"; version="1.0-5"; sha256="1q23fplvklaaldicqic0zpnh301m08zb9k21l47zj47g9m9pj4bc"; depends=[rgl]; }; @@ -6561,7 +6574,7 @@ in with self; { cycloids = derive2 { name="cycloids"; version="1.0"; sha256="00pdxny11mhfi8hf76bfyhd1d53557wcbl2bqwjzlpw5x3vdnsan"; depends=[]; }; cymruservices = derive2 { name="cymruservices"; version="0.5.0"; sha256="1xhdvijybdy7312qdbp50881yix587pmym0hchnwb3h0vhjv553v"; depends=[memoise pingr stringi]; }; cyphid = derive2 { name="cyphid"; version="1.1"; sha256="0ya9w8aw27n0mvvjvni4hxsr4xc8dd08pjxx7zkfl1ynfn5b08am"; depends=[fda]; }; - cyphr = derive2 { name="cyphr"; version="1.0.2"; sha256="0wfwkjn0a99n90f46c3y6vqpz5w549vm5slrjql9mz6l1r7jz0cf"; depends=[getPass openssl sodium]; }; + cyphr = derive2 { name="cyphr"; version="1.1.0"; sha256="03w26b5vvy9zwzp001g0lpwcndwqdsfsz80x11kik0cih1g8apsw"; depends=[getPass openssl sodium]; }; cystiSim = derive2 { name="cystiSim"; version="0.1.0"; sha256="0pz8jxi4lgcwzrb4dh8xn63xhpaga5rzg5hwqicwv8isc16iqizd"; depends=[ggplot2 knitr magrittr]; }; cytoDiv = derive2 { name="cytoDiv"; version="0.5-3"; sha256="00c0gqgypywgbhavb15bvj6ijrk4b5zk86w85n9kwr4069b7jvwc"; depends=[GenKern plotrix]; }; cytofan = derive2 { name="cytofan"; version="0.1.0"; sha256="0gqs98mnwiawnyfb9hs5nlin8d1fj64bszn4b40gs8ajyh36r9pp"; depends=[ggplot2 RColorBrewer]; }; @@ -6571,19 +6584,19 @@ in with self; { d3heatmap = derive2 { name="d3heatmap"; version="0.6.1.2"; sha256="1ici8j0wzzklhmw94qlxm292qs562vc32wq8mnjsas2n1p35vkmk"; depends=[base64enc dendextend htmlwidgets png scales]; }; d3plus = derive2 { name="d3plus"; version="0.1.0"; sha256="0kadz83pals03n0v3zqhmhf6visigk52yn58xckhb57fid4xzj5w"; depends=[htmlwidgets magrittr]; }; d3r = derive2 { name="d3r"; version="0.8.7"; sha256="0xl3im76lp7pd5lhp8jfyqdm4j4zvjrx5a5fl81xv2cf7x3n4f2a"; depends=[dplyr htmltools tidyr]; }; - dBlockmodeling = derive2 { name="dBlockmodeling"; version="0.1.1"; sha256="17vw8mf03ry2qz3nbwch51p2x1j18vrzyf881dh604wql5k8yfjc"; depends=[]; }; + dBlockmodeling = derive2 { name="dBlockmodeling"; version="0.2.0"; sha256="0c1hvawb9gw6vckims3g8kzn2c4f0as5x1vw39sdvkwc92xy26lv"; depends=[]; }; dChipIO = derive2 { name="dChipIO"; version="0.1.5"; sha256="1xrafw5h071d8rfqaic3gifc80jpiddjz5x6l2cr8kgjvph60gqh"; depends=[]; }; dCovTS = derive2 { name="dCovTS"; version="1.1"; sha256="1pd50nfmfcqpi8zj20ngl0hc23qa4rabqhc1xci3ivyhs0valhsl"; depends=[doParallel energy foreach]; }; dGAselID = derive2 { name="dGAselID"; version="1.2"; sha256="0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6"; depends=[ALL Biobase genefilter MLInterfaces]; }; dHSIC = derive2 { name="dHSIC"; version="2.1"; sha256="1c1xz1f1fp937w4rlylvqv3ii0p9dafvmn4fqq8rzxhcg5rn9j4l"; depends=[Rcpp]; }; - dLagM = derive2 { name="dLagM"; version="1.0.21"; sha256="0ppgisp76a9fc3p63ckm445sh2dy5jybh5q7karg9hsx4y13appd"; depends=[AER dynlm formula_tools lmtest MASS nardl plyr roll strucchange wavethresh]; }; - dMod = derive2 { name="dMod"; version="1.0.0"; sha256="1mj2a9hpfldxbsiggi27nz3w0klp7qwpplpwh4bi9ik25vll25a0"; depends=[cOde deSolve doParallel dplyr foreach ggplot2 plyr rootSolve stringr]; }; + dLagM = derive2 { name="dLagM"; version="1.1.2"; sha256="0mn90jl9648q9r8mw6h0jsjrjhiqylry55f7zi1rjbr4p838djn9"; depends=[AER dynlm formula_tools lmtest MASS nardl plyr roll strucchange wavethresh]; }; + dMod = derive2 { name="dMod"; version="1.0.1"; sha256="1xw52kliyiv9vrw0m9y7baqdcpqz4706625if8b63nfr70i77a9p"; depends=[cOde deSolve doParallel dplyr foreach ggplot2 plyr rootSolve stringr]; }; dSVA = derive2 { name="dSVA"; version="1.0"; sha256="0vy0flyg82x0n9vw6jf9f76qy84sp0wnis91faj37ac5hdv3pvsb"; depends=[sva]; }; daarem = derive2 { name="daarem"; version="0.4.1"; sha256="1krixphwjh4wp38in7ypwc4y4ncdrryhsnjnn1y48fm2jgc8zvjl"; depends=[]; }; - dabestr = derive2 { name="dabestr"; version="0.2.2"; sha256="10vzp28bx4vf9jc3l9jjw94wir75j8h60lcncafbdwvxjh5alpfs"; depends=[boot cowplot dplyr ellipsis forcats ggbeeswarm ggforce ggplot2 magrittr rlang simpleboot stringr tibble tidyr]; }; - dad = derive2 { name="dad"; version="3.3.0"; sha256="1154jk4j1h5wr3c68pj0slh90jxccia28wpmygn9mz0mlvx9km9l"; depends=[DescTools e1071 lattice]; }; - dae = derive2 { name="dae"; version="3.1-21"; sha256="0b562s3w5h0nmq32yfw4y55w9ax2kgf67w3mdy5qaipqhjf35jq6"; depends=[ggplot2 plyr]; }; - daewr = derive2 { name="daewr"; version="1.1-8"; sha256="1p5nblh745mq2zk48qa5dfpplywrz9yycmckv6ky4dv67j40qpqx"; depends=[BsMD FrF2 lattice stringi]; }; + dabestr = derive2 { name="dabestr"; version="0.2.3"; sha256="11gbfijssv86k81fc1vlymk8zagjxfflx2qc9w1sfapnlk42b2aj"; depends=[boot cowplot dplyr ellipsis forcats ggbeeswarm ggforce ggplot2 magrittr rlang simpleboot stringr tibble tidyr]; }; + dad = derive2 { name="dad"; version="3.4.0"; sha256="0jgirdnp3gaychnjg4mp4p1mdn31hlngs1znzvlxhrd0cqyi4ccd"; depends=[DescTools e1071 ggplot2]; }; + dae = derive2 { name="dae"; version="3.1-23"; sha256="1qpsnyjq2imci45hn0c00cwgvhdrcbrfrvwmjm87k8vb3g0wqhgr"; depends=[ggplot2 plyr]; }; + daewr = derive2 { name="daewr"; version="1.2-3"; sha256="0ic7lpydsdiilqsbvc5yskrrl6a2l6kmgiz1idz0ic0klyk6rnig"; depends=[FrF2 lattice stringi]; }; daff = derive2 { name="daff"; version="0.3.5"; sha256="00zcdf215m7p3xm9yv571v09znhdqacxg69hb5b5j749mp4wdsyj"; depends=[jsonlite V8]; }; dafs = derive2 { name="dafs"; version="1.0-37"; sha256="1vdi57qaqdn39yf1ih2gzry02l289q4bffpksglsl4shs6bg2206"; depends=[s20x]; }; dagR = derive2 { name="dagR"; version="1.1.3"; sha256="13jyhwjvvrjjja18rqzfdcw9ck90qm5yjwd25nygxgdf1894y03b"; depends=[]; }; @@ -6594,7 +6607,8 @@ in with self; { dams = derive2 { name="dams"; version="0.2"; sha256="0hf5s8i61r5q4h3s8dfmdl3vkj7v15ha59pjvpjqx3yihsgziqz9"; depends=[RCurl]; }; dang = derive2 { name="dang"; version="0.0.11"; sha256="14bxzbkrqzs0ic7n4rlaa429lwdgldlcx97h8l7ma6jh8c0fx3qr"; depends=[]; }; dani = derive2 { name="dani"; version="0.1-1"; sha256="0ff0hcb5r8k6m6kv1zhjrpvl7gr1al3q0zlk4yjj89qd2j5byqp8"; depends=[Epi]; }; - dann = derive2 { name="dann"; version="0.1.0"; sha256="0v6dnf7acjg6w64nwrscxhi3g7pr6bdiwdbiyaa8k760yg4r965n"; depends=[dplyr fpc ggplot2 magrittr MASS mlbench purrr rlang stringr tibble]; }; + dann = derive2 { name="dann"; version="0.2.0"; sha256="18c9rx7qg76pnmg2h4zazqq7k0vxgqh70j85cb7cc8lf0qsj6l8i"; depends=[fpc ggplot2 MASS purrr Rcpp RcppArmadillo rlang stringr tibble]; }; + danstat = derive2 { name="danstat"; version="0.1.0"; sha256="1wb4v4s9qc7qna7jgd1kk0xvyaqmxhnmjvr5wlk5jjl355lhjxbc"; depends=[httr jsonlite readr]; }; dapr = derive2 { name="dapr"; version="0.0.3"; sha256="136chxijyxrl5sbiggxf56zga26zqds647z1z2igwn5mdff1wxyb"; depends=[]; }; darksky = derive2 { name="darksky"; version="1.3.0"; sha256="1740cw5qifgvqa0nafd6lmllxi32n1zm45zlify1yn3h1qdcszhb"; depends=[ggplot2 gridExtra gtable httr plyr]; }; dartR = derive2 { name="dartR"; version="1.1.11"; sha256="0k768ppm4iw4fi72dp8f1684kizqp1spfb4cnnqxq1dy6w0qz5i8"; depends=[adegenet ape data_table directlabels dismo doParallel foreach gdistance ggplot2 hierfstat igraph leaflet MASS mmod pca3d pegas plyr PopGenReport qvalue reshape2 rgdal rrBLUP seqinr SNPassoc SNPRelate sp StAMPP stringr tidyr vegan]; }; @@ -6606,38 +6620,39 @@ in with self; { dataCompareR = derive2 { name="dataCompareR"; version="0.1.2"; sha256="0n10dqnrlpwafxys68b3ly156235lhqby71qay0vb0r6bvl2g349"; depends=[dplyr knitr markdown stringi]; }; dataMaid = derive2 { name="dataMaid"; version="1.4.0"; sha256="133ipl06sc8iicvkbgjxfs0qia76r2p1qhi693vacgfdbd7cmak5"; depends=[ggplot2 gridExtra haven htmltools magrittr pander rmarkdown robustbase stringi whoami]; }; dataMeta = derive2 { name="dataMeta"; version="0.1.1"; sha256="13xxayqxbps07h0xr5b7sb7q30gy5zm7jzzaq4k20fskkjrzhzcm"; depends=[dplyr]; }; - dataPreparation = derive2 { name="dataPreparation"; version="0.4.2"; sha256="12707zncdzsj05gw336g37qigbzq3iqmxx7agca32prx0mj39wdj"; depends=[data_table lubridate Matrix progress stringr]; }; + dataPreparation = derive2 { name="dataPreparation"; version="0.4.3"; sha256="1fchr68siq6vxz4qzlkrm2p6zld3s8mw7izmyzqffvrlqmrh0bdm"; depends=[data_table lubridate Matrix progress stringr]; }; dataQualityR = derive2 { name="dataQualityR"; version="1.0"; sha256="0f2410sd6kldv7zkqsmbz1js0p5iq7zwlnfwmmnlbrd303p35p3j"; depends=[]; }; - dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.5"; sha256="0aagj04x5792rp73h5lwvrx63nh739jn3cmhhrzchm9symq8x8mx"; depends=[curl httr jsonlite lubridate readr xml2]; }; + dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.6"; sha256="0375gqpj7xhbj7b2445984swcqhp6389w1jy3llvkdwzrf3pfvnc"; depends=[curl httr jsonlite lubridate readr xml2]; }; datacheck = derive2 { name="datacheck"; version="1.2.2"; sha256="1i3n5g1b6ix8gpn4c74s7ll1dbrllrzgpb1f3hk449d6p4kmisq6"; depends=[Hmisc shiny stringr]; }; datadigest = derive2 { name="datadigest"; version="1.0.2"; sha256="1v4nwflrgjhwkrdlrjnqyq1spv1jkgxn1kmapml0zrvnvwf0r1a1"; depends=[haven Hmisc htmltools htmlwidgets jsonlite miniUI shiny tibble]; }; datadogr = derive2 { name="datadogr"; version="0.1.2"; sha256="10zbxb9gkymw78ras9y4wrifz7cxh3y630yzjcf9ds2p557vcjzp"; depends=[anytime dplyr glue httr lubridate purrr stringr tibble tidyr]; }; dataesgobr = derive2 { name="dataesgobr"; version="1.0.0"; sha256="10znkaq45m4bgiyjx4x8s6ilvxlry6h0z54pkg8jgmblrpfazmqb"; depends=[dplyr DT httr jsonlite readODS readr readxl shiny shinycssloaders shinyFiles shinyjs shinythemes stringi stringr yaml]; }; dataframes2xls = derive2 { name="dataframes2xls"; version="0.4.7"; sha256="10krlv0l5w021z0qd7rj93pzfjjmcjlda4xz4vq470bxbjmn1bss"; depends=[]; }; datafsm = derive2 { name="datafsm"; version="0.2.3"; sha256="18q6s8sz8bm2xlfvhj0x5sagpn363s3k21s428wd0bqzqlppwbmb"; depends=[caret GA Rcpp]; }; + datagovsgR = derive2 { name="datagovsgR"; version="0.3.0"; sha256="02ndbq24f59ky43jdy1dclkry7xqi8qiny2dfv1xjnxl1yhc0ik5"; depends=[data_table dplyr httr purrr stringr]; }; datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; datamaps = derive2 { name="datamaps"; version="0.0.3"; sha256="00pvns98miq56z3prbb5qg608d5ns9wbp0711x3mmqg0bld1xwmp"; depends=[htmlwidgets magrittr]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; datanugget = derive2 { name="datanugget"; version="1.0.0"; sha256="1ki4kgz6y9a313f07jml39pdxhadgs287rkpnlwvcw6kgj5qxala"; depends=[doSNOW foreach]; }; dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.1"; sha256="0q1zd1l7l0hmbs1bx469d706rmprjbz2f2dgcnfp9wxfgqpfxkz1"; depends=[assertthat httr lubridate readr tibble]; }; + dataone = derive2 { name="dataone"; version="2.1.4"; sha256="19v5c2xbdsz06dcx7xz4jld3dgp98k66cps2hnxpd33wbm8n7x6h"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringr uuid XML]; }; datapack = derive2 { name="datapack"; version="1.3.2"; sha256="0v9m7fbzi1w5p3arb0ywl4yglyw87civc59ndqsdm8rp84gbvnbl"; depends=[digest hash redland uuid XML]; }; - datapackage_r = derive2 { name="datapackage.r"; version="0.1.2"; sha256="0y4adfgdf2k04aaimxzj1fz50j6w6fqc8gvjls47nlqhi3dgmdav"; depends=[config future httr iterators jsonlite jsonvalidate purrr R_utils R6 readr rlist stringr tableschema_r urltools V8]; }; + datapackage_r = derive2 { name="datapackage.r"; version="1.3.0"; sha256="0njvv5g64yp29wz7vdcfqqf0xjzp9pcs79mmll07bm9jfr528rd5"; depends=[config future httr iterators jsonlite jsonvalidate purrr R_utils R6 readr rlist stringr tableschema_r urltools V8]; }; datapasta = derive2 { name="datapasta"; version="3.1.0"; sha256="0sqv29iv2rv50rbw1601rn8p7gv7rsw00djhl7h1znr0igzi5b82"; depends=[clipr readr rstudioapi]; }; + dataresqc = derive2 { name="dataresqc"; version="1.0.3"; sha256="1b04lzb479p95iv7gzb5ds6c48l8kcps857qjy3wqkhr67jhd0dc"; depends=[]; }; datarium = derive2 { name="datarium"; version="0.1.0"; sha256="1v98yxsxhfqlalz5qy3x5axb7fy067vf3y0qg7ngixphmy9qybym"; depends=[]; }; - datarobot = derive2 { name="datarobot"; version="2.16.0"; sha256="0hks5qww2m3l65qbmhybdc9zsbd8i8wj8vb5n9ss00bva1syi92v"; depends=[curl httr jsonlite yaml]; }; + datarobot = derive2 { name="datarobot"; version="2.17.0"; sha256="1k4idrbc9fgw8afc7cq9fqg189b86h1q0fkpq06k7dc4fl65wyna"; depends=[curl httr jsonlite yaml]; }; datasauRus = derive2 { name="datasauRus"; version="0.1.4"; sha256="1w1yhwwrmh95bklacz44wjwynxd8cj3z8b9zvsnzmk18m5a4k0fl"; depends=[]; }; dataseries = derive2 { name="dataseries"; version="0.2.0"; sha256="11wc2p5m8qbdmkpbd21lpwl28a1dpab88c3gqyrhsn0298lpnip4"; depends=[]; }; datasets_load = derive2 { name="datasets.load"; version="1.2.0"; sha256="0x2m3k4grqizm97p41gjy3zkmhshicndp6cwyncl149yay6x8y5i"; depends=[DT miniUI shiny]; }; datastepr = derive2 { name="datastepr"; version="0.0.2"; sha256="039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2"; depends=[dplyr lazyeval magrittr R6 tibble]; }; datastructures = derive2 { name="datastructures"; version="0.2.8"; sha256="1lf48c77z4br1sv8kdbxadn30v5ygn9shjgsf8g37rci7nngpx1k"; depends=[BH purrr Rcpp]; }; datasus = derive2 { name="datasus"; version="0.4.1.1"; sha256="1vcyn0iia71c58959d3wcdqlh6336p3lsxbvwsj0fd9sll0a605s"; depends=[dplyr httr magrittr RCurl readr rvest stringi stringr xml2]; }; - datautils = derive2 { name="datautils"; version="0.1.5"; sha256="1yy25a84zmfh54jvxwa7mv4j296rmjgd40m4p81mrsswlqvncmfn"; depends=[deldir gplots gtools]; }; dataverse = derive2 { name="dataverse"; version="0.2.0"; sha256="0lyga8rdsir2yr1n9nr10iiaf6a7dxp1nb04bx8mq8ljrvpkgr8n"; depends=[httr jsonlite xml2]; }; - date = derive2 { name="date"; version="1.2-38"; sha256="1ziy17kz02j7lals14s43rs9lmxxfn2ppfi55q4b3m4gfj9pr4jc"; depends=[]; }; + date = derive2 { name="date"; version="1.2-39"; sha256="0mwp1619rxqyyyyxk224fh0x6g4rgyvr97q0kj076cxp71b97cdm"; depends=[]; }; datetime = derive2 { name="datetime"; version="0.1.4"; sha256="0nn1yxknsn3crmwbkws5kvfjhd65dw0fkfbg67gba0dyaqp1jg37"; depends=[]; }; datetimeutils = derive2 { name="datetimeutils"; version="0.3-0"; sha256="1f63vzinj39pf85bw9xa4szkwmy4d4rxxnqm1jd396ywppgxzn7c"; depends=[]; }; datoramar = derive2 { name="datoramar"; version="0.1.0"; sha256="0zq6vhq6dmsyagmqrmb85z6fy9qhwra3s3iasr3jgc4ryr009pml"; depends=[httr jsonlite tibble]; }; - datos = derive2 { name="datos"; version="0.2.0"; sha256="0ndwgqh8jvnl328k4zg2mn8j6nvz9526jk6h10y676v2pffcfgvw"; depends=[dplyr rlang yaml]; }; datr = derive2 { name="datr"; version="0.1.0"; sha256="0sqwhn6zdaq8i45ry207mpbda1djjaxp9mcn13hi5wkry6z0bmlr"; depends=[devtools]; }; datrProfile = derive2 { name="datrProfile"; version="0.1.0"; sha256="1bhyk3xjgwf92i765z3bkdnzkxg8fshriz9r6m371q1c75xysfil"; depends=[dplyr odbc RSQLite]; }; dave = derive2 { name="dave"; version="2.0"; sha256="1rraphpp34czyjj15xzvj1ihlnqzcppqls9n2g85n49zv0n1ngn8"; depends=[cluster labdsv nnet tree vegan]; }; @@ -6646,22 +6661,21 @@ in with self; { dbConnect = derive2 { name="dbConnect"; version="1.0"; sha256="1vab5l4cah5vgq6a1b9ywx7abwlsk0kjx8vb3ha03hylcx546w42"; depends=[gWidgets RMySQL]; }; dbEmpLikeGOF = derive2 { name="dbEmpLikeGOF"; version="1.2.4"; sha256="0vhpcxy702cp3lvlif2fzmvccys8iy7bv1fbg6ki2l8bvn2f7c5p"; depends=[]; }; dbEmpLikeNorm = derive2 { name="dbEmpLikeNorm"; version="1.0.0"; sha256="0h5r2mqgallxf9hin64771qqn9ilgk1kpsjsdj2dqfl3m8zg967l"; depends=[dbEmpLikeGOF]; }; - dbarts = derive2 { name="dbarts"; version="0.9-13"; sha256="1i9f1nc1ky6bav639x6kgszy91986q2m64147icdiv4diijzdcfx"; depends=[]; }; + dbarts = derive2 { name="dbarts"; version="0.9-16"; sha256="1yj2d5siicd2l0wfqjchh6llcd393yvvkix88m9p4596ga404svl"; depends=[]; }; dbfaker = derive2 { name="dbfaker"; version="0.1.0"; sha256="00n2z4q5drpg26pw826i16rg07m7w66a0r466q2lrl14hxs4rcaq"; depends=[assertive DBI dplyr foreach parsedate RPostgreSQL tidyr]; }; dbflobr = derive2 { name="dbflobr"; version="0.0.1"; sha256="1j97gwmqr8mv05yfd1dxm0v3l0vxrjrqf0drvkms2nja5asbhinq"; depends=[checkr DBI flobr glue RSQLite]; }; dblcens = derive2 { name="dblcens"; version="1.1.7"; sha256="02639vyaqg7jpxih8cljc8snijb78bb084f4j3ns6byd09xbdwcw"; depends=[]; }; dblr = derive2 { name="dblr"; version="0.1.0"; sha256="0wzmhmp706mw0pkh81nsb7qzclwyhm6f2mjvpvz043ng5xrxwvvw"; depends=[CatEncoders data_table Metrics xgboost]; }; dbmss = derive2 { name="dbmss"; version="2.7-1"; sha256="0gasvpgmmpq8x776qmfrv4xiniz2fi1zxywzi7rm8xgmwr5q9kp3"; depends=[cubature ggplot2 Rcpp RcppParallel reshape2 spatstat spatstat_utils tibble]; }; - dbparser = derive2 { name="dbparser"; version="1.0.4"; sha256="0s69da7czznnmv2kgipss1cdklx5ijh0q5aa2lg2gx3an1rjbgp2"; depends=[DBI odbc purrr readr RMariaDB tibble tidyr XML]; }; - dbplot = derive2 { name="dbplot"; version="0.3.2"; sha256="0xw1zjvf1fa092kyryq2pk7dd4y60ka8yczaxk0f231mmsm1741p"; depends=[dplyr ggplot2 purrr rlang]; }; + dbparser = derive2 { name="dbparser"; version="1.1.0"; sha256="12fx17bj076nl493mian9rz3iv1fx86qr0q2k2z6hqsvg4866q1j"; depends=[DBI dplyr odbc purrr readr RMariaDB RSQLite tibble XML]; }; + dbplot = derive2 { name="dbplot"; version="0.3.3"; sha256="1svizj9hcd417yii8ll9s3mnvdqpa5awy9xl71kbwpfcnpdzqf1r"; depends=[dplyr ggplot2 magrittr purrr rlang]; }; dbplyr = derive2 { name="dbplyr"; version="1.4.2"; sha256="1q2dflr88s5a1amzfld3087q422vf70052qn84zyd8895kdg10xp"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble tidyselect]; }; dbscan = derive2 { name="dbscan"; version="1.1-5"; sha256="1vh29nmmana2755zcy15i1mhj3amwc2r84cq9d71wqr7ygzynphk"; depends=[Rcpp]; }; dbstats = derive2 { name="dbstats"; version="1.0.5"; sha256="0pr80mx8y87l96hhg0rp3ajxl7yx2f8qr0y1zrjkbzxavjmp9k34"; depends=[cluster pls]; }; dbx = derive2 { name="dbx"; version="0.2.5"; sha256="1g1pm0zw667m0wdzndak1qzym527lcl6gmdfzi5b3rlinkk2y0s2"; depends=[DBI]; }; dc3net = derive2 { name="dc3net"; version="1.2.0"; sha256="19ibsvbnq6y88vqvgkm31zrqwjhpml59d792bz0zkk50r1q5bnyr"; depends=[c3net igraph RedeR]; }; dcGOR = derive2 { name="dcGOR"; version="1.0.6"; sha256="0rvwa25r23yayx1i6xhkfaw2z85d2iyfx3slg3aq1m0fa7kj380p"; depends=[dnet igraph Matrix]; }; - dccvalidator = derive2 { name="dccvalidator"; version="0.1.0"; sha256="1b8w2bq5fmxriyvfj76cispfp5bz7gpqf774z4i6yd6hbswa5ilw"; depends=[config ggplot2 glue golem jsonlite jsonvalidate knitr markdown purrr readr readxl reticulate rlang shiny shinyBS shinydashboard shinyjs skimr stringr tibble visdat]; }; - dcemriS4 = derive2 { name="dcemriS4"; version="0.55"; sha256="15x4hjc5fwpn80h90q5x9a3p84pp3mxsmcx4hq5l0j52l9dy9nv3"; depends=[oro_nifti]; }; + dccvalidator = derive2 { name="dccvalidator"; version="0.2.0"; sha256="141vzkmzbm0wwc5pmkxw4hf5iqra6gnw97gdx6fq473fk22c6cd2"; depends=[config ggplot2 glue golem htmltools knitr markdown purrr reactable readr readxl reticulate rlang shiny shinyBS shinydashboard shinyjs skimr tibble visdat]; }; dclone = derive2 { name="dclone"; version="2.3-0"; sha256="0w1bhzsnmnhsrrw5ffm89pj2wy2fmx14y7g6b1mb2wlwbczjzzsh"; depends=[coda Matrix rjags rstan]; }; dclust = derive2 { name="dclust"; version="0.1.0"; sha256="1icfx52v3g7kkkc11pw0xlrc8dlx5q3n2zbrd3fccmw17jzxqbg7"; depends=[openssl phylogram]; }; dcminfo = derive2 { name="dcminfo"; version="0.1.7"; sha256="03r0ynzc5cck2rz20zbg5zx8v6s66ivizqav1pjkyvp6kxkmnf8q"; depends=[CDM]; }; @@ -6674,14 +6688,14 @@ in with self; { ddi = derive2 { name="ddi"; version="0.1.0"; sha256="0pnkylz7l6brx6i73wys637w811psxhnr39lcmkag41s6jcgabd5"; depends=[]; }; ddiv = derive2 { name="ddiv"; version="0.1.0"; sha256="1r2sxlkw1vxf2svdi1nary3hb7c5k1b4j820mj268r9swmy632ch"; depends=[MASS segmented]; }; ddpca = derive2 { name="ddpca"; version="1.1"; sha256="1qsanid7sr2nc9pwzyz4cbjc1vg0rj255d3rnh1rb22agrgj2bc1"; depends=[MASS Matrix quantreg RSpectra]; }; - ddpcr = derive2 { name="ddpcr"; version="1.12"; sha256="0kda154m588vdkjzm1vdr9irbb57l4w25pqjhqhawasvrna8nicf"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; }; - ddsPLS = derive2 { name="ddsPLS"; version="1.1.1"; sha256="03vi7dwg24sa3bmwkhvvw8x0vll2i59zlqa5w17fs9c7cbc77w3y"; depends=[corrplot doParallel foreach MASS RColorBrewer Rcpp Rdpack]; }; + ddpcr = derive2 { name="ddpcr"; version="1.13"; sha256="0g8cfrc22wd209ikm1pyw4zz1xxk3pabkx9g2md4zx4csb8yv1kf"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; }; + ddsPLS = derive2 { name="ddsPLS"; version="1.1.4"; sha256="0h0iiycprham72k3yq81d15gnliln0i2r71lxhsqrcbrly9hpanr"; depends=[corrplot doParallel foreach MASS RColorBrewer Rcpp Rdpack]; }; ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; }; deBInfer = derive2 { name="deBInfer"; version="0.4.2"; sha256="108vijk71sgsj14hwfv78r4lnn68cybvnpr92zvrvl0d82b7qxfd"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; deGradInfer = derive2 { name="deGradInfer"; version="1.0.1"; sha256="0yczn63fhpirvz1g1kq9q0m04sisflxxgxy70c87jyvrw12nfwss"; depends=[deSolve gdata gptk]; }; - deSolve = derive2 { name="deSolve"; version="1.27.1"; sha256="05sax045qrk550gsn2i7krb9rbg51rx88x4v190acsigqknxffrv"; depends=[]; }; + deSolve = derive2 { name="deSolve"; version="1.28"; sha256="0jasvdzig0pzhzspmy20089az19r91xjfb9q6h8gj7c4mr6fymac"; depends=[]; }; deTS = derive2 { name="deTS"; version="1.0"; sha256="08yq7vfcd8fv8qw2w0f1rnj3rzys9kslmkqspmiz6prmzqvj1zf1"; depends=[pheatmap RColorBrewer]; }; - deaR = derive2 { name="deaR"; version="1.2.0"; sha256="1p3lsck0zwzfgjxyvzgvxig9g5p7i67pf71hrhzpmkxvafafx9jw"; depends=[dplyr ggplot2 gridExtra igraph lpSolve plotly tidyr writexl]; }; + deaR = derive2 { name="deaR"; version="1.2.1"; sha256="16rhpdw3fyc2fyrm0yfmq0im5r4svhs4v52gjh9y6lx4n8pmncph"; depends=[dplyr ggplot2 gridExtra igraph lpSolve plotly tidyr writexl]; }; deadband = derive2 { name="deadband"; version="0.1.0"; sha256="02pq3d0l0wy8bdlyfir3zf46j1ascx4qajyq5cf28yl62q6ngq5d"; depends=[TTR]; }; deal = derive2 { name="deal"; version="1.2-39"; sha256="0sw0v1mm004ky1gjw3dmvf2vb7nf2j9s9386bhqxijw63j7xnjd3"; depends=[]; }; deamer = derive2 { name="deamer"; version="1.0"; sha256="1xbxr78n6s1yhf192ab4syi1naqlwl9z4cxzchrkw80q7bxqfiz8"; depends=[]; }; @@ -6691,7 +6705,7 @@ in with self; { decido = derive2 { name="decido"; version="0.2.0"; sha256="17myg67qry1sbd1scv9bbvdh67fpcnqcb6r8n0kajdxb96vnlqk0"; depends=[Rcpp]; }; decision = derive2 { name="decision"; version="0.1.0"; sha256="13d0yyg5zp7n3r92l0l1dsffxfph6vacrlzga9rz41l5pja72z6g"; depends=[]; }; decisionSupport = derive2 { name="decisionSupport"; version="1.105.2"; sha256="095qwgsw6y1clv2hyjr56s2wg8q1nhd22ikh9b3l2mcsw2xdzvjy"; depends=[chillR fANCOVA ggplot2 msm mvtnorm nleqslv rriskDistributions]; }; - deckgl = derive2 { name="deckgl"; version="0.1.8"; sha256="0nm9jf166343sd01mchw2v6qpsfjgdhf6zd2p92rqyhp9k0hq5lv"; depends=[base64enc htmltools htmlwidgets jsonlite magrittr readr tibble yaml]; }; + deckgl = derive2 { name="deckgl"; version="0.2.5"; sha256="1rqw84pzbip9752q4zmhrhv8gis5dc8q6v1kkgnblhkg10wrb0lw"; depends=[base64enc htmltools htmlwidgets jsonlite magrittr readr tibble yaml]; }; decode = derive2 { name="decode"; version="1.2"; sha256="1qp0765gl3pgfdzjwj7icf3zminxxmrlw6gx3vj51y6c2y5ws4as"; depends=[]; }; decoder = derive2 { name="decoder"; version="1.1.13"; sha256="1kpcx754djfr8y0flpa1hrr92s0wbxw23rlvb6q3k9absvdvvmg6"; depends=[backports]; }; decomposedPSF = derive2 { name="decomposedPSF"; version="0.1.3"; sha256="0p9n0qi21facdp9c4fzs78ap4w1wvpvkv51kgx1gkr949kw8cv4n"; depends=[forecast PSF Rlibeemd tseries]; }; @@ -6702,8 +6716,9 @@ in with self; { deducorrect = derive2 { name="deducorrect"; version="1.3.7"; sha256="10lvhdnnc6xiy20hy6s5rpqcvilj8x0y6sn92rfjkdbfsl00sslp"; depends=[editrules]; }; deductive = derive2 { name="deductive"; version="0.1.3"; sha256="19h41a20c27gmky9xrgqkf0n2s8fzn2hiivs5dg71kl9gc4m1jhn"; depends=[lintools stringdist validate]; }; deep = derive2 { name="deep"; version="0.1.0"; sha256="1764cnsax8jwp2pb6rnmlb0f5m99jss84yi9rp017hdm20izvzrq"; depends=[]; }; - deepNN = derive2 { name="deepNN"; version="0.3"; sha256="1h2hk95ja8r4c9ha0phsndp4h5j3d4q4dw3mjmhycij7igy4m3kd"; depends=[Matrix]; }; + deepNN = derive2 { name="deepNN"; version="1.0"; sha256="0jpf25i0f3a0dfqykx8dl8qq7f37l1n28pzp715bxc0izsrrx9bk"; depends=[Matrix]; }; deepboost = derive2 { name="deepboost"; version="0.1.6"; sha256="1nf9gjk9gjl2dz7cr3vh5lg8nxkbqwr82a132nw853axbdgbs9ga"; depends=[Rcpp]; }; + deepdep = derive2 { name="deepdep"; version="0.2.0"; sha256="1yl1vnz9qysv38zn7dhz05s38l701zrbrx58bcpg862i8xf1nl40"; depends=[cranlogs ggforce ggplot2 ggraph graphlayouts httr igraph jsonlite scales]; }; deepgmm = derive2 { name="deepgmm"; version="0.1.59"; sha256="1kmvk0vmfzs49n67j2cd1d46fi9gvmxklcqghgmwfw25k4xmpgkb"; depends=[corpcor mvtnorm]; }; deeplr = derive2 { name="deeplr"; version="1.0.0"; sha256="0pg1vy4x53qns8qn5sv0nqplf23w8dwj0b0wbibpr52lgqjc34r7"; depends=[httr purrr rjson stringr tibble tokenizers utf8]; }; deepnet = derive2 { name="deepnet"; version="0.2"; sha256="09crwiq12wzwvdp3yxhc40vdh7hsnm4smqamnk4i6hli11ca90h4"; depends=[]; }; @@ -6713,7 +6728,8 @@ in with self; { deformula = derive2 { name="deformula"; version="0.1.1"; sha256="0h85yzl8kvjwrn1mkzyblvknf7gg8kx8y85qnvkwfbr9ik42ngn1"; depends=[]; }; degreenet = derive2 { name="degreenet"; version="1.3-3"; sha256="07mkj2sdp09624mmb1x3djjypnrzn43qn2j4m93blli51j6zchm3"; depends=[igraph network]; }; deisotoper = derive2 { name="deisotoper"; version="0.0.7"; sha256="0lpmx3qy44xjlil4nsbvcbczxq22vr8xn6v9a5bdx7cd31qwm2l3"; depends=[rJava]; }; - deldir = derive2 { name="deldir"; version="0.1-23"; sha256="0790dwxb2mz1ffz8gd5vwdr0if2q76dzy3vab5rsykf9kz72n4g0"; depends=[]; }; + delayed = derive2 { name="delayed"; version="0.3.0"; sha256="04f4k683jzb763sb9knb81lw8df56y1378g4i3c1x8m83bvj1mhs"; depends=[assertthat BBmisc data_table future igraph progress R6 rlang rstackdeque uuid visNetwork]; }; + deldir = derive2 { name="deldir"; version="0.1-25"; sha256="0kdglv8rc1pb4ilcid4xc9wpv5kkj2y6x6wg7919k3hya7mz58ph"; depends=[]; }; delt = derive2 { name="delt"; version="0.8.2"; sha256="06g03wy9r2qvly0lnv5fv4k366mhlk56qkvak0xaxy99p1i34kmv"; depends=[denpro]; }; deltaPlotR = derive2 { name="deltaPlotR"; version="1.6"; sha256="15vjg3viyfrxvvh34p8i7j8p0vpg5628g8198adhi0i2ri3ygz9a"; depends=[MASS]; }; deltar = derive2 { name="deltar"; version="1.0.0"; sha256="1ki89ysz4qlq5z094ybg3aqfcb6g633ccvpj1cg6nri9z5qjwpm1"; depends=[Bchron]; }; @@ -6724,13 +6740,13 @@ in with self; { demogR = derive2 { name="demogR"; version="0.6.0"; sha256="06x82ffbdv6ifl8xh52d3npdwha67v1ylfjp78j5pa4wdqkg221b"; depends=[]; }; demography = derive2 { name="demography"; version="1.22"; sha256="1m15capbfknr4rqxmfgj1vb7rmgambk6r9ic37149525sg7wn3j6"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; }; demu = derive2 { name="demu"; version="0.3.0"; sha256="1mp5iz8mg0d6cyqi3f6fdhk6x5xxvng5bi13b7jnlp60wpjrq0il"; depends=[ClusterR fields Matrix Rcpp RcppArmadillo spam]; }; - dendextend = derive2 { name="dendextend"; version="1.13.2"; sha256="1iclvd9cyckd4djpa87ynm05fk6zl4b4m735za1w4irimc130m3r"; depends=[ggplot2 magrittr viridis]; }; + dendextend = derive2 { name="dendextend"; version="1.13.4"; sha256="1pjbz6sb4pgh3d5pm53vmf3q8y6lq3hrgjd6547xxs3m63sb8mn4"; depends=[ggplot2 magrittr viridis]; }; dendroTools = derive2 { name="dendroTools"; version="1.0.7"; sha256="052957wbrwgnm5lab3ynwlziih4d0hhm7agaa907zfbrz2xl6nr0"; depends=[boot brnn Cubist dplyr ggplot2 gridExtra knitr lubridate magrittr MLmetrics oce plotly psych randomForest reshape2 scales viridis]; }; dendroextras = derive2 { name="dendroextras"; version="0.2.3"; sha256="0hb7crbgsnbcwvbk05iz5ik45n7zgysmwjj6xc46131yd8l0i1qx"; depends=[]; }; dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; }; dendsort = derive2 { name="dendsort"; version="0.3.3"; sha256="1m4qh79ppfvipmbi8m8vwq0hqmwwipbg5izihz5j6x8a4g5i6iym"; depends=[]; }; denoiSeq = derive2 { name="denoiSeq"; version="0.1.1"; sha256="18w69gxbnazg5k8bzi76slcqxnbfmrndp548zazz8bpxz3jns699"; depends=[]; }; - denoiseR = derive2 { name="denoiseR"; version="1.0"; sha256="094nknr3hyx4kv18vnpdzrcpmfb4r7x9jgrp3p6x4nwrgzdh3r95"; depends=[FactoMineR irlba Matrix]; }; + denoiseR = derive2 { name="denoiseR"; version="1.0.2"; sha256="1q5kxiwfkrf2k0gpidzhl4hyzyjcm33rwlw4dan9nkx1181naw9l"; depends=[FactoMineR irlba Matrix]; }; denovolyzeR = derive2 { name="denovolyzeR"; version="0.2.0"; sha256="03ya5clzqp12lfhw073ri0pwgxn53a6pvnais317a8bv1yinxspb"; depends=[dplyr reshape2]; }; denpro = derive2 { name="denpro"; version="0.9.2"; sha256="19hrpfd44jaavq81dbyj3frris4aflfc8lig0471whv0pc6jci2k"; depends=[]; }; denseFLMM = derive2 { name="denseFLMM"; version="0.1.2"; sha256="1lfhd73zvvz6glq41lb2a9x63fjwjfp53zmy9g78fg6gz5lbnbpm"; depends=[MASS Matrix mgcv mvtnorm]; }; @@ -6752,13 +6768,12 @@ in with self; { descr = derive2 { name="descr"; version="1.1.4"; sha256="05maviw8l8qhmy7p80gs3dlyy6pqk5k1686ny4xla4psj8mr7lbk"; depends=[xtable]; }; describedata = derive2 { name="describedata"; version="0.1.0"; sha256="10ryy886jr2gwi6h90girl82ivwrmhz1vcwi4f6khmmpwsy95hav"; depends=[broom dplyr forcats ggplot2 haven lmtest purrr rlang stringr tibble tidyr]; }; describer = derive2 { name="describer"; version="0.2.0"; sha256="1pjyihmn4gkaamixsc3qwynsc02pwv9bgn6s7z7acmmsybhhs6xn"; depends=[]; }; - descriptr = derive2 { name="descriptr"; version="0.5.0"; sha256="0bbd3h07s4mfhryh6yyvgs4xs0nshxngyapz89jsc1drl3dn6plh"; depends=[cli dplyr forcats ggplot2 gridExtra magrittr purrr rlang scales tibble tidyr vistributions xplorerr]; }; + descriptr = derive2 { name="descriptr"; version="0.5.1"; sha256="0s4zjh5vw73sj5pxq6v4nnrprbdxz470hnw8m2hzx6n04abbkzd1"; depends=[cli dplyr ggplot2 gridExtra magrittr purrr rlang scales tibble tidyr vistributions xplorerr]; }; descstatsr = derive2 { name="descstatsr"; version="0.1.0"; sha256="1pz5lww1dkkqvsq6h0vkch39bj76qffmmag3zlag5in75s4wj0wl"; depends=[moments zoo]; }; - desctable = derive2 { name="desctable"; version="0.1.6"; sha256="1qmwfhsy8lvz7gi49gdka3jizdhrnrnk08ka36h46kf7b7lv0p1g"; depends=[dplyr DT htmltools pander purrr]; }; + desctable = derive2 { name="desctable"; version="0.1.7"; sha256="12axy5knsvzh2pxzax9k9zl69vasvabchcspy6ssirfbln660z1f"; depends=[dplyr DT htmltools pander purrr]; }; deseasonalize = derive2 { name="deseasonalize"; version="1.35"; sha256="1fjsa7g34dckjs6mx9b10m99byxagggm0p9pw2f1vmpjqlasin0l"; depends=[FitAR lattice]; }; desiR = derive2 { name="desiR"; version="1.2.1"; sha256="0ghcv96bbwn74mka4dpf2lkpnlikjn3q6lx2sl8bbw77nriap0n6"; depends=[]; }; designGG = derive2 { name="designGG"; version="1.1"; sha256="1x043j36llwd7kd4skbpl2smz2ybsxjqf5yd1xwqmardq60gdv2w"; depends=[]; }; - designGLMM = derive2 { name="designGLMM"; version="0.1.0"; sha256="0ya246mqclkhg8cq6f5mzqn67qks22f3fribyjcvhrx395n0f21v"; depends=[]; }; designmatch = derive2 { name="designmatch"; version="0.3.1"; sha256="0px6iyqik4sfs25yybamvf3ay0vd6r75acj8hin76jl6l7fwk30f"; depends=[lattice MASS Rglpk slam]; }; designr = derive2 { name="designr"; version="0.1.9"; sha256="1rdnz7xq2h7bxb8fvsimj4bjdqx9z0xnsg59ibb0gi69vvlswac8"; depends=[crossdes dplyr MASS tibble]; }; desirability = derive2 { name="desirability"; version="2.1"; sha256="094gxvp6a60lfcc0a0gk9rv1p6ajnzq9m58sy8cvhcj5337g4fmk"; depends=[]; }; @@ -6770,17 +6785,16 @@ in with self; { detector = derive2 { name="detector"; version="0.1.0"; sha256="010i063b94hzx7qac8gpl67gmk7hzgqm9i1c7pbbw4la3wcd9lz7"; depends=[stringr]; }; detpack = derive2 { name="detpack"; version="1.1.3"; sha256="1mk2k9akagz7knd4n5p8nxkmnm2mdv9izk4i5yl2v9nv5v39mc4h"; depends=[]; }; detrendeR = derive2 { name="detrendeR"; version="1.0.4"; sha256="1z10gf6mgqybb9ml6z3drq65n7g28h2pqpilc2h84l6y76sy909c"; depends=[dplR]; }; - detrendr = derive2 { name="detrendr"; version="0.6.4"; sha256="0n7mrh05y5jg2y77xv25yadw01lr8ms5ki32i32k38zlc635c1sl"; depends=[assertthat autothresholdr checkmate doParallel dplyr filesstrings foreach fs glue ijtiff iterators magrittr matrixStats plyr purrr Rcpp RcppParallel rlang sigmoid stringi stringr withr]; }; + detrendr = derive2 { name="detrendr"; version="0.6.5"; sha256="1xl6vr3hf47drfyg0mfxdkdpcxphc8skbkdijz4csjgki875i6a6"; depends=[autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr matrixStats plyr purrr Rcpp RcppParallel rlang stringr withr]; }; detzrcr = derive2 { name="detzrcr"; version="0.3.0"; sha256="1f4c6l9nk7cis5gnf3f97nys4b9c13cxcn2h1m60mva1d5p9zzpb"; depends=[DT ggplot2 MASS shiny]; }; devEMF = derive2 { name="devEMF"; version="3.7"; sha256="0fv44y440xr52xymh1zyrryf7xrkm9lbs3qgybwfzz0ssx2iy6al"; depends=[]; }; devFunc = derive2 { name="devFunc"; version="0.1"; sha256="0f2s5gssk9napmah7zcss1rnh7pzlq90gzwcnvyr9rrq6k118n8q"; depends=[plyr stringr]; }; devRate = derive2 { name="devRate"; version="0.1.10"; sha256="0c5hg98w83d02lvb7rbgx8c24li58vpxjy71if337p7cyzzd1lqg"; depends=[]; }; devoid = derive2 { name="devoid"; version="0.1.0"; sha256="1aq7yyfpid3r41c6v5v92im2iq9m3d7gnisc9rkc9zpjfpbpzpx8"; depends=[]; }; - devtools = derive2 { name="devtools"; version="2.2.1"; sha256="0i2f549hxkn0j1x1avkhwy68c9r48v9284j7x9cak2q6dfsqz61f"; depends=[callr cli covr crayon desc digest DT ellipsis git2r glue httr jsonlite memoise pkgbuild pkgload rcmdcheck remotes rlang roxygen2 rstudioapi rversions sessioninfo testthat usethis withr]; }; - dexter = derive2 { name="dexter"; version="1.0.3"; sha256="1400m0wq1yqsiyihycfc41pa5zjzbjjh81aj4k20h627bkj75dn7"; depends=[DBI dplyr MASS Rcpp RcppArmadillo rlang RSQLite tidyr]; }; + devtools = derive2 { name="devtools"; version="2.2.2"; sha256="1bhb2j8ilpdzwd0c678mcgfpdw88vncsjma79afcikxmzcsz9279"; depends=[callr cli covr crayon desc digest DT ellipsis git2r glue httr jsonlite memoise pkgbuild pkgload rcmdcheck remotes rlang roxygen2 rstudioapi rversions sessioninfo testthat usethis withr]; }; + dexter = derive2 { name="dexter"; version="1.0.6"; sha256="047sqq0xr1va7dkqvlbfa8dnphvfiqgx6ljwy2apff151px3zba1"; depends=[DBI dplyr MASS Rcpp RcppArmadillo rlang RSQLite tidyr]; }; dexterMST = derive2 { name="dexterMST"; version="0.1.2"; sha256="1h56dr2z2pzi4zdy3dmyb2vg2jg1v5602c497khkvrbr7qfx8zra"; depends=[crayon DBI dbplyr dexter dplyr fastmatch igraph Rcpp rlang RSQLite tibble tidyr]; }; - dextergui = derive2 { name="dextergui"; version="0.2.1"; sha256="1c92j70zihzsqi83rs7hgnp70qgg6y0hdcs3gxin80grsihj1frw"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets jsonlite networkD3 RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; - df2json = derive2 { name="df2json"; version="0.0.2"; sha256="10m7xn7rm4aql1bzpckjcx5kvdw44m1pxgzqkgkd40lzqb1cwk18"; depends=[rjson]; }; + dextergui = derive2 { name="dextergui"; version="0.2.2"; sha256="1g6qxjmxkrna10lahsdfilpjw587kk6zh8vs1saw9l27i3izpbi9"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets jsonlite networkD3 RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; dfCompare = derive2 { name="dfCompare"; version="1.0.0"; sha256="1lhx69j0bkjbnp5jz23hrbxjcf04vf3big4k593ixz003xs2077f"; depends=[]; }; dfConn = derive2 { name="dfConn"; version="0.2.1"; sha256="03yl00mqj6r7p2xmrwam2chgqlq4qpfcm85n4b3b41vrm27xg11g"; depends=[data_table doParallel fields foreach ggplot2 gplots gtools nlme Rcpp RcppArmadillo stringr]; }; dfadjust = derive2 { name="dfadjust"; version="1.0.1"; sha256="0hzfkgf84j670vi4jfhlggbnzj96xa860212y3b0h5liwz1iazsy"; depends=[]; }; @@ -6788,14 +6802,15 @@ in with self; { dfcrm = derive2 { name="dfcrm"; version="0.2-2.1"; sha256="01rn3zvi9xljmx48lkclckhnixian1vwq1frr8n784dsclp86spg"; depends=[]; }; dfexplore = derive2 { name="dfexplore"; version="0.2.1"; sha256="04nbhn59l1kas26nwj4qflkjvvr33sj1mm7zg7fhvya85gvlhrbf"; depends=[ggplot2]; }; dfmeta = derive2 { name="dfmeta"; version="1.0.0"; sha256="0ca48adfhaxac33jmxbynlyg3ak9l5mmjhlr69n4hnz6325gn9vb"; depends=[data_table ggplot2 lme4 plyr]; }; - dfmta = derive2 { name="dfmta"; version="1.7-0"; sha256="0ci5faqkrpqkqkl0hrx9j78cid3cr1bs5mlkw4xargf3n4lfgk5j"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; + dfmta = derive2 { name="dfmta"; version="1.7-1"; sha256="13i4ck32z2p4plmy7lz2y4zakc1w915f5h6d9s6vj71212rrg9qm"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; + dfoliatR = derive2 { name="dfoliatR"; version="0.1.0"; sha256="1vgcz763fvapwh98453040yddyka83p9bhgqssx9c0n69z20ylix"; depends=[dplR dplyr forcats ggplot2 ggpubr MASS plyr reshape2 rlang]; }; dfoptim = derive2 { name="dfoptim"; version="2018.2-1"; sha256="1gya0sx8ajy04kscds06d6m9prxdwr1dmyfc6awsm6r1jwbibzb3"; depends=[]; }; dfped = derive2 { name="dfped"; version="1.1"; sha256="11ffsah14igba276m9d3cla0kgb3isizm5d7j1iqcd0wq23il7hq"; depends=[ggplot2 rstan]; }; dfphase1 = derive2 { name="dfphase1"; version="1.1.1"; sha256="0bk4bl5lqd7m4mzk6kg71fmh918wcy85zghr3lyayxlk30fl4ppc"; depends=[lattice Rcpp robustbase]; }; dfpk = derive2 { name="dfpk"; version="3.5.1"; sha256="010rlxj66ar3y61fnm7ys3p6aimlr8ylqq4q4flzr9m88klz8701"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; + dfvad = derive2 { name="dfvad"; version="0.3.0"; sha256="1n6hwpgnpd8vlv187ajl6js8z3yvl60h87q3kzgi9hvn9v73ip5z"; depends=[]; }; dga = derive2 { name="dga"; version="1.2"; sha256="13mfampnghcs5xplzq69bw948lqhw561pn54j3gb0ydsg5bm5vmr"; depends=[chron]; }; - dggridR = derive2 { name="dggridR"; version="2.0.3"; sha256="1gdwxrl5c5mprfk7rx5mk8davi4mmg1crccxaaipnbnsilg9j9vh"; depends=[dplyr ggplot2 Rcpp rgdal sp]; }; - dglars = derive2 { name="dglars"; version="2.1.5"; sha256="0d66vcn16l9w638vwplj9cmhdq6q1rlg9rhaycxpa6788x44di85"; depends=[Matrix]; }; + dglars = derive2 { name="dglars"; version="2.1.6"; sha256="13bnvinqgpmkisjri0sjsyzsh9nqplpry3n3galkv8dqhgpncq4w"; depends=[Matrix]; }; dglm = derive2 { name="dglm"; version="1.8.3"; sha256="0vj4vddqcrjzgqsi6zsxm22gj5pa5dm50wcxip4vi8kbwxaahnaj"; depends=[statmod]; }; dgmb = derive2 { name="dgmb"; version="1.2"; sha256="1r5md917wipx78n63x87fpvsc3h87c68cpacrrs9dhss199p1a5k"; depends=[abind MASS]; }; dgo = derive2 { name="dgo"; version="0.2.15"; sha256="16z3vag1fwsnmynqh0zpwq5qp5ac3xf4787lwqy7asx8qgcc3wmw"; depends=[assertthat data_table dgodata ggplot2 lubridate R6 rstan survey]; }; @@ -6811,32 +6826,31 @@ in with self; { diagonals = derive2 { name="diagonals"; version="1.0.1"; sha256="0m9hlxww6n405fn26gbw36kjlb7b9759hj56lz820wkj972zw301"; depends=[]; }; diagram = derive2 { name="diagram"; version="1.6.4"; sha256="0f6ffprn5k0ir1s7m9s7izc64aa17r3gnygagz5bihrlsvawaavw"; depends=[shape]; }; dialr = derive2 { name="dialr"; version="0.3.0"; sha256="1wdl3m6mlpxhy75kyzxypf053n2zaf8skk0xq1m4gklq4disbg32"; depends=[dialrjars rJava]; }; - dialrjars = derive2 { name="dialrjars"; version="8.10.14"; sha256="0xzgrqgydgrljp3ylqk24hwgj9mcpxsfd4xp3wx8k1d4jmz80gw8"; depends=[rJava]; }; + dialrjars = derive2 { name="dialrjars"; version="8.11.4"; sha256="02992ynq7pdga0gccpqr7y4j2wl0dkiqh13vjzvf8bdgkjk0g5w4"; depends=[rJava]; }; dials = derive2 { name="dials"; version="0.0.4"; sha256="04vz6spp8lw011a9fn8z0bkba9nghgj2hvsxy3n6dqqs3ajd4nfa"; depends=[DiceDesign dplyr glue purrr rlang scales tibble withr]; }; diaplt = derive2 { name="diaplt"; version="1.3.0"; sha256="1kkqhkv3s8rrpqd05jidjdnqmlnb3s9f8rr34rfqj7k4nh0qzzcz"; depends=[]; }; dice = derive2 { name="dice"; version="1.2"; sha256="0gic7lqnsdmwv3dbzwwmcwdfyfqlq8kpr2pciqphd1j2ligzwl3s"; depends=[gtools]; }; diceR = derive2 { name="diceR"; version="0.6.0"; sha256="1jwgngvajnm80g079z4jks5f3y2hy7hz3h9cf7c6wlb8spmaffxr"; depends=[abind apcluster assertthat blockcluster caret class cli clue cluster clusterCrit clValid dbscan dplyr e1071 flux ggplot2 gplots Hmisc infotheo kernlab klaR kohonen magrittr mclust NMF poLCA progress purrr quantable RankAggreg RColorBrewer Rcpp Rtsne sigclust stringr tibble tidyr]; }; dichromat = derive2 { name="dichromat"; version="2.0-0"; sha256="1l8db1nk29ccqg3mkbafvfiw0775iq4gapysf88xq2zp6spiw59i"; depends=[]; }; dicionariosIBGE = derive2 { name="dicionariosIBGE"; version="1.6"; sha256="1rss1ydhcn6sma2lmlpq6s0h3dglwc20w499x1jzkcjnzc1rc7gl"; depends=[]; }; - did = derive2 { name="did"; version="1.2.2"; sha256="0slc0rdajwri1zrlxaw251b2xlkc002f67bq5v68iirys3hlm37n"; depends=[BMisc ggplot2 gridExtra knitr MASS pbapply]; }; + did = derive2 { name="did"; version="1.2.3"; sha256="05xc41491mq0v9gm841m8l3cdjhjip3z1aqjqaqpaz05rwp3bngx"; depends=[BMisc ggplot2 gridExtra knitr MASS pbapply]; }; didrooRFM = derive2 { name="didrooRFM"; version="1.0.0"; sha256="12clfnbm56jwldw0afb0nb0argnd97mx7369jiywhxy0p4xqibqq"; depends=[dplyr]; }; dief = derive2 { name="dief"; version="1.2"; sha256="1i4icdfqvw7imaj1fh392zmzfyz8aqlv9s5naqxm1pm0lqfxl6ca"; depends=[flux fmsb ggplot2 plyr]; }; dielectric = derive2 { name="dielectric"; version="0.2.3"; sha256="1p1c0w7a67zxp1cb99yinylk5r1v89mmpfybcy94ydydhydbhivk"; depends=[]; }; - diem = derive2 { name="diem"; version="1.0"; sha256="09qf47y3mbhkdy7nmy9mcvx371hyss81igc5frbhbp85z2pf5zzb"; depends=[dbscan ggplot2 igraph Matrix Rcpp RcppEigen scales]; }; dietr = derive2 { name="dietr"; version="1.0"; sha256="0wz7nvhn1c3l36kpmdv4j3ia3wp77qzjlx8rmqv7al0wpmjnxcb6"; depends=[rfishbase]; }; diezeit = derive2 { name="diezeit"; version="0.1-0"; sha256="0rq1k08byvqn99wpql7drnrcxlzcqrcxixh7bczbc8dv1hhsgk9i"; depends=[brew httr jsonlite]; }; - difNLR = derive2 { name="difNLR"; version="1.3.0"; sha256="1p3iiaw1wy9ni74y96yp4003406wy1jz773nq919hmrqj0agxkg7"; depends=[CTT ggplot2 msm nnet plyr reshape2 VGAM]; }; + difNLR = derive2 { name="difNLR"; version="1.3.2"; sha256="13kzd2c96nymi27d0yladpl2fyd2sl0rlbbfk55cv5w5zlachggl"; depends=[CTT ggplot2 msm nnet plyr reshape2 VGAM]; }; difR = derive2 { name="difR"; version="5.0"; sha256="0k0vw5l3pig514ngpvf0rwhwxc316ws352fgw49c3c95ydsz6wd8"; depends=[deltaPlotR lme4 ltm mirt]; }; difconet = derive2 { name="difconet"; version="1.0-4"; sha256="0cjadi4mnpfmy18vyp0dw55mnhs0zddf51w59gvq6gszk145z3bq"; depends=[data_table gplots mvtnorm stringr]; }; diffEnrich = derive2 { name="diffEnrich"; version="0.1.1"; sha256="19bq2frd2h8gh6mdy3pcwd54zzv170c0m1m3wnp5c4gadb9424qf"; depends=[dplyr ggnewscale ggplot2 here reshape2 rlang stringr]; }; diffIRT = derive2 { name="diffIRT"; version="1.5"; sha256="0kip6wz9l9q80qsqwf32pwz7d9vqin6dgfwf0nxlrlzf8xjsxgim"; depends=[statmod]; }; diffMeshGP = derive2 { name="diffMeshGP"; version="0.1.0"; sha256="1dc37hxh3fi27gw11kij57j78p87bza77s82niagdv6dqhldj5a4"; depends=[]; }; diffdepprop = derive2 { name="diffdepprop"; version="0.1-9"; sha256="0mgrm1isr26v2mcm6fkzc7443ji00vpnqmw4zngx81n7442b3cl2"; depends=[gee PropCIs rootSolve]; }; - diffdf = derive2 { name="diffdf"; version="1.0.3"; sha256="0nz0jwa02yc16cx51z5hp5zaw40gbcyqli3jpxgrnzw76f8jhkah"; depends=[tibble]; }; + diffdf = derive2 { name="diffdf"; version="1.0.4"; sha256="03cr0gvspchdj49kiggsm6i9h5d9z07aswggj4n46lnyz52ihivj"; depends=[tibble]; }; diffeR = derive2 { name="diffeR"; version="0.0-6"; sha256="0ivdcfirs3jbd6m3rryq590szkhplm2kr9chjgcgd88ar5nrqfg7"; depends=[ggplot2 raster reshape2 rgdal]; }; diffee = derive2 { name="diffee"; version="1.1.0"; sha256="01lb1prz70mxgymhhsvx48kbfy69xyyaabsmfhf28af9wfb89662"; depends=[igraph pcaPP]; }; diffeqr = derive2 { name="diffeqr"; version="0.1.3"; sha256="1696bxh916688zlfxbm6jaqk245xw51ar7rqz7m2nla0ibka86sj"; depends=[JuliaCall stringr]; }; - diffman = derive2 { name="diffman"; version="0.1.0"; sha256="03m8qbzxyinknx0d87kq8hnag8xdv09vwaafahk80x1lvg389559"; depends=[data_table dplyr igraph Matrix progress Rcpp sf tidyverse]; }; + diffman = derive2 { name="diffman"; version="0.1.1"; sha256="08b4kqxfg8pmyl2xg8flb581s9wnkdcy5rrmrxp8a89y265qmirx"; depends=[data_table dplyr igraph Matrix progress Rcpp sf tidyverse]; }; diffobj = derive2 { name="diffobj"; version="0.2.3"; sha256="17wq3haj2i8x5cy1xx2c8hj2p65hasrjyiqxcq61kzvxd0zyjxzw"; depends=[crayon]; }; diffpriv = derive2 { name="diffpriv"; version="0.4.2"; sha256="12q2v93369bshid83rsy1csbr9ay6rfpd8zdxm12zi7py3f9sjs8"; depends=[gsl]; }; diffr = derive2 { name="diffr"; version="0.1"; sha256="0ydwnpyzirynffsnvip667y0jqzy7yfqlfpqhb38xvmd9rmwfbp8"; depends=[htmlwidgets]; }; @@ -6845,7 +6859,7 @@ in with self; { diffusion = derive2 { name="diffusion"; version="0.2.7"; sha256="1j9s9vw5sc4k956bk4yp3bf4fnp7lhhkwcvlzvsh1w4dyaj8l35h"; depends=[dfoptim nloptr systemfit]; }; diffusionMap = derive2 { name="diffusionMap"; version="1.2.0"; sha256="1rvk7069brlm1s9kqj4c31mwwr3mw4hmhay95cjjjfmw5xclff2j"; depends=[igraph Matrix scatterplot3d]; }; diffusr = derive2 { name="diffusr"; version="0.1.4"; sha256="1f3h387kblw1xzdnxphwgfl1n7f6i07kk7kfslvbfxkalbish6ii"; depends=[igraph Rcpp RcppEigen]; }; - digest = derive2 { name="digest"; version="0.6.23"; sha256="18h5s8vkdcz2vhpsx6g3ig00zalrihr03skn95zw3lr2y56pafmp"; depends=[]; }; + digest = derive2 { name="digest"; version="0.6.25"; sha256="1r9dkq0kxkps54gkmgcdngsd068p054va2vhnqhs5jmwp2vsvk0m"; depends=[]; }; digitalPCR = derive2 { name="digitalPCR"; version="1.1.0"; sha256="0hwqq84yr1hnvf4bygc5425887dhqjjjyy1ils71iavcal04s8pb"; depends=[]; }; digitize = derive2 { name="digitize"; version="0.0.4"; sha256="1qw4x4z9vrs79sd9b2daw668nc6nvjl4qhayfqmd87yxa2ydv6x0"; depends=[readbitmap]; }; dils = derive2 { name="dils"; version="0.8.1"; sha256="1q6ba9j14hzf7xy895mzxc6n9yjgind55jf350iqscwzxf7ynp33"; depends=[igraph Rcpp]; }; @@ -6853,16 +6867,16 @@ in with self; { dina = derive2 { name="dina"; version="2.0.0"; sha256="1sq7998xc5qhvd8clc8r32ch7axinh2a2dc7i1w2p148wv130yhd"; depends=[Rcpp RcppArmadillo rgen simcdm]; }; dinamic = derive2 { name="dinamic"; version="1.0"; sha256="0mx72q83bbwm10ayr3f1dzwr5wgz7gclw7rh39yyh95slg237nzr"; depends=[]; }; dineq = derive2 { name="dineq"; version="0.1.0"; sha256="1xrhrdc970f7hm9xng9z7xmshnmmz89cn3gmnyabzprx44ccr9sl"; depends=[boot Hmisc]; }; - dint = derive2 { name="dint"; version="2.1.2"; sha256="01z3fw3rhhnwgibgrcgv0n2664s78xndk1k2jghz7ig07sgrmr8p"; depends=[]; }; - dipsaus = derive2 { name="dipsaus"; version="0.0.4"; sha256="1qh4aqhg9y1z4wf81fjc42418wz6rz0mn537ys6av8ln2qy4b2v9"; depends=[base64enc base64url cli crayon data_table digest fastmap future future_apply jsonlite R6 Rcpp RcppParallel rlang shiny stringr synchronicity txtq]; }; + dint = derive2 { name="dint"; version="2.1.3"; sha256="0nxppn7gx4sjwn7jns5bwbqfid3jkbsx2lxi0rjdkbsawy77fc85"; depends=[]; }; + dipsaus = derive2 { name="dipsaus"; version="0.0.5"; sha256="0brzlfh9ja6lf8mx383x4rrlhn4m5w30whpkw951fhlk8yzlzxzd"; depends=[base64enc base64url cli crayon digest fastmap future future_apply jsonlite progressr R6 Rcpp RcppParallel rlang shiny stringr synchronicity txtq]; }; diptest = derive2 { name="diptest"; version="0.75-7"; sha256="0rcgycgp0bf8vhga1wwgfcz3pqs5l26hgzsgf2f97dwfna40i1p1"; depends=[]; }; directPA = derive2 { name="directPA"; version="1.4"; sha256="0rbdygdslr2gvg4mvnp09lc9rv0sg9jwdf5a5ks50v67n25x6y5d"; depends=[calibrate rgl]; }; - directlabels = derive2 { name="directlabels"; version="2018.05.22"; sha256="0xcpc56ssb9430b0xcdhayk3qaak2qcakyss2pz14y5w2027hblv"; depends=[quadprog]; }; + directlabels = derive2 { name="directlabels"; version="2020.1.31"; sha256="08s1gnwp4bn8xahwjaq0f1qzhwh2dvybzhq3z7xyzn8cnyzmis6c"; depends=[quadprog]; }; directotree = derive2 { name="directotree"; version="1.0.0"; sha256="1yv703mb3fnvjxr2rrxvb8x869hbbjx4l94qbbsmy0ssknayq60y"; depends=[collapsibleTree data_tree]; }; dirichletprocess = derive2 { name="dirichletprocess"; version="0.3.1"; sha256="09ibrlsbn80ghrblk6qblrs0s8fzfnjash1v7x6a2hpg92h9g86y"; depends=[ggplot2 gtools mvtnorm]; }; dirmcmc = derive2 { name="dirmcmc"; version="1.3.3"; sha256="117p3jvinmha7a2phcpzq38ig05kcranp15xbxqvv0cgh3c95fjr"; depends=[mcmcse]; }; dirmult = derive2 { name="dirmult"; version="0.1.3-4"; sha256="1r9bhw1z0c1cgfv7jc0pvdx3fpnwplkxwz8j8jjvw14zyx803rnz"; depends=[]; }; - disaggregation = derive2 { name="disaggregation"; version="0.1.2"; sha256="1ga87gawbivgf3zb34m0qc72v16ds5vq49gx8y5xmrgnk0975x12"; depends=[cowplot doParallel dplyr foreach ggplot2 maptools Matrix raster RcppEigen rgdal rgeos sp sparseMVN splancs TMB]; }; + disaggregation = derive2 { name="disaggregation"; version="0.1.3"; sha256="04wmwwhmcgi1cdr8iyhilsphpzb7r5xs04vhqx5z01y7cgardivx"; depends=[cowplot doParallel dplyr foreach ggplot2 maptools Matrix raster RcppEigen rgdal rgeos sp sparseMVN splancs TMB]; }; discSurv = derive2 { name="discSurv"; version="1.4.1"; sha256="0xi016ah8xc8bv92qvyslvx30anncrki49ccg3qw79yh5vzns1wk"; depends=[data_table functional mgcv mvtnorm]; }; discfrail = derive2 { name="discfrail"; version="0.1"; sha256="1ll8c0fwwmz2yw8w582422r8bk9lr1570d7m7w2n1flrnqpqmk8j"; depends=[Matrix numDeriv survival]; }; discgolf = derive2 { name="discgolf"; version="0.2.0"; sha256="07clh1awnibgrh7vl4a51r8dbya2rbmicm8v8x8mq8h8am2b3j0s"; depends=[crul jsonlite xml2]; }; @@ -6871,17 +6885,18 @@ in with self; { disclapmix = derive2 { name="disclapmix"; version="1.7.3"; sha256="0hh20ff3szh9s9r1hdymk73ysn0v5lh2gfzgqpvfvdhcc5z8xjk7"; depends=[cluster disclap MASS Rcpp RcppProgress]; }; disco = derive2 { name="disco"; version="0.6"; sha256="1abvhf0yb4mw02j1krjb7q68jpwdnl2narcalf3vkjcbflcp76z3"; depends=[ggplot2 RColorBrewer tmod]; }; discord = derive2 { name="discord"; version="0.1"; sha256="0nrjpl7l9lzkn92fwzaj3vh8zv2b6706gnh5c4zalkld0xac3c23"; depends=[dplyr]; }; + discourseGT = derive2 { name="discourseGT"; version="1.0.0"; sha256="1faq344prjmya13jxpxfdq1vh1gqkssjmsq62i8lhmk8kwkp6nax"; depends=[GGally ggplot2 ggpubr igraph network]; }; discoveR = derive2 { name="discoveR"; version="1.2.4"; sha256="0f1f4wmh4ys3awlf5kxm6l0xj2qw86y14sj03bd1gs252r43zrbg"; depends=[colourpicker DT factoextra ggplot2 rmarkdown rstudioapi shiny shinyAce shinydashboard shinydashboardPlus shinyjs stringi zip]; }; discreteMTP = derive2 { name="discreteMTP"; version="0.1-2"; sha256="13qsf1kc3rph0kkdkz31qj072www5dwjyk73lfpy141rzhcn1v1x"; depends=[]; }; discreteRV = derive2 { name="discreteRV"; version="1.2.2"; sha256="1lhf67cccr96zl3j1sysh2bv0pbgvkbgjdzm35fvrdm7k74ypjsi"; depends=[MASS plyr]; }; - discretecdAlgorithm = derive2 { name="discretecdAlgorithm"; version="0.0.6"; sha256="10rw3x58xlhyvrnsryypy8r8hqp3nswsii37z9hzm2wa00ffl3sf"; depends=[igraph Rcpp RcppEigen sparsebnUtils]; }; + discretecdAlgorithm = derive2 { name="discretecdAlgorithm"; version="0.0.7"; sha256="01x3qfjj7dwv0m9q8zdhfrpbj9ys9y5p7d3z8ywjrqy4jw88svjs"; depends=[igraph Rcpp RcppEigen sparsebnUtils]; }; discretization = derive2 { name="discretization"; version="1.0-1"; sha256="00vq2qsssnvgpx7ihbi9wcafpb29rgv01r06fwqf9nmv5hpwqbmp"; depends=[]; }; discrim = derive2 { name="discrim"; version="0.0.1"; sha256="1g698bimrvzbzzv6mfafwmdyyziscr055zhssnz69j250mh81kyw"; depends=[dials parsnip purrr rlang tibble withr]; }; diseasemapping = derive2 { name="diseasemapping"; version="1.4.6"; sha256="16y2w8qjq442qdbqlrg3s2mn53rlcipl22m3q168gda5klm4f7sl"; depends=[sp]; }; - disk_frame = derive2 { name="disk.frame"; version="0.3.3"; sha256="0wxc73sh8k5inwxlgrv3cjmkc6bqvdh9i1dqdpnfmxs2kirr17i8"; depends=[bigreadr bit64 crayon data_table dplyr fs fst furrr future future_apply globals glue jsonlite pryr purrr Rcpp rlang stringr]; }; + disk_frame = derive2 { name="disk.frame"; version="0.3.4"; sha256="03mm73fps4hsryk3mlw088jx2z1a75xifwbixbv4fy38xihs973j"; depends=[benchmarkme bigreadr bit64 crayon data_table dplyr fs fst furrr future future_apply globals glue jsonlite pryr purrr Rcpp rlang stringr]; }; diskImageR = derive2 { name="diskImageR"; version="1.0.0"; sha256="1r19k5fdjn6vkn11p5df77fnxfqaz3nciiaai0f3pr2bgpfppzka"; depends=[subplex zoo]; }; dismo = derive2 { name="dismo"; version="1.1-4"; sha256="1j4pzbyvn8msi3k2y79nc6pqlrald46168ibznjwrr6rdiqhy4gj"; depends=[raster sp]; }; - dispRity = derive2 { name="dispRity"; version="1.3.3"; sha256="0lq6zf335312phriyh1mz4w6rwljjdipdj0qfb3298f6nkwp2miy"; depends=[ade4 ape Claddis geiger geometry geoscale mnormt paleotree phangorn phyclust vegan]; }; + dispRity = derive2 { name="dispRity"; version="1.3.5"; sha256="1nn2bqjs0krib5z7m1mlpv5rwwv7m85vbdfz2rszx4rbfvg1nbkr"; depends=[ade4 ape Claddis geiger geometry geoscale mnormt phangorn phyclust vegan]; }; disparityfilter = derive2 { name="disparityfilter"; version="2.2.3"; sha256="0dkk3qws631mf0g02di5rsrvh5954cykysyri0g8aqgik0j9dg06"; depends=[igraph]; }; displayHTS = derive2 { name="displayHTS"; version="1.0"; sha256="0mqfdyvn2c5c3204ykyq29ydldsq0kb3a1d7mrzqr7cvrj1ahlqa"; depends=[]; }; dispmod = derive2 { name="dispmod"; version="1.2"; sha256="16r6is0pchzc9mxpz0c44f72j76vsh3j9damalcxajrha06dkdq4"; depends=[]; }; @@ -6902,11 +6917,11 @@ in with self; { disto = derive2 { name="disto"; version="0.2.0"; sha256="09pafy8y1ifgglqmal32dy34acx06ypsq2bgwsn6fjiqr9kw401j"; depends=[assertthat broom dplyr factoextra fastcluster fastmatch ggplot2 pbapply proxy tidyr]; }; distory = derive2 { name="distory"; version="1.4.3"; sha256="1mszk8fv1z46d7y1q37mhq9b5yk39w2i9rq6mgdf03afdslrmrip"; depends=[ape]; }; distr = derive2 { name="distr"; version="2.8.0"; sha256="1dyff4m33xmw6hxb3jxzr8vvajg3qz3rfcrfxjxwsswlddfz0zdv"; depends=[MASS sfsmisc startupmsg]; }; - distr6 = derive2 { name="distr6"; version="1.3.2"; sha256="04v98si3slhzl5z424ylpp6d9m3220w9sppjfnr1py9b1kap43gx"; depends=[checkmate data_table pracma R6 R62S3]; }; + distr6 = derive2 { name="distr6"; version="1.3.4"; sha256="0qak33p63f6fmapvcgffs2g53lv6a7sx8p5qkqkddbj51nx8wfc3"; depends=[checkmate data_table R6 R62S3 set6]; }; distrDoc = derive2 { name="distrDoc"; version="2.8.0"; sha256="1iq2gbfbsf3h279yh3fnqsi39gdw15vc6r1g33xcb8kgmmqmvf0p"; depends=[distr distrEx distrMod distrSim distrTeach distrTEst MASS RandVar startupmsg]; }; distrEllipse = derive2 { name="distrEllipse"; version="2.8.0"; sha256="1ymfa8xpgs8zjp4psiwmll5z0vji496fivxmcavspzxy31cw70wx"; depends=[distr distrEx distrSim mvtnorm setRNG startupmsg]; }; distrEx = derive2 { name="distrEx"; version="2.8.0"; sha256="1gwhsnlrnzyp2x97d9wfdy5pa9z3q5il934wjv4kxs9wsvkwsr5h"; depends=[distr startupmsg]; }; - distrMod = derive2 { name="distrMod"; version="2.8.3"; sha256="0zg7wc9khfi66yl80k472hwvyc3wf2kbqwd1zsp6sb44jh9hlzsw"; depends=[distr distrEx MASS RandVar sfsmisc startupmsg]; }; + distrMod = derive2 { name="distrMod"; version="2.8.4"; sha256="1mddy0pqza99x9jccxqz8gf6c4zj6cxqrk38dhd3p5lc52r76hwa"; depends=[distr distrEx MASS RandVar sfsmisc startupmsg]; }; distrRmetrics = derive2 { name="distrRmetrics"; version="2.8.0"; sha256="17kbl8b4q8w7il1f02yqr11filhbd5axjwwna20gvjim501jizwi"; depends=[distr fBasics fGarch startupmsg]; }; distrSim = derive2 { name="distrSim"; version="2.8.0"; sha256="0g16mljlz7fnb5k6c9h5vplm3n51sdbybv9cifbia0y6p9zml383"; depends=[distr setRNG startupmsg]; }; distrTEst = derive2 { name="distrTEst"; version="2.8.0"; sha256="06rdcwfgbhc81zqisg414nj0kji59xvhm782b63hk54a8b2zwhh5"; depends=[distrSim setRNG startupmsg]; }; @@ -6920,9 +6935,10 @@ in with self; { divagis = derive2 { name="divagis"; version="1.0.0"; sha256="1kcz7i3h9xxpqhlq0rl08pgcwd16ygjjmm0jjv9knn2ggc3j1jzz"; depends=[rgdal sp]; }; diveMove = derive2 { name="diveMove"; version="1.4.5"; sha256="0lik5r5y7q5r7gh9d9y9r2m8vvibn13dp9p50j0hpzk67wgw3vya"; depends=[geosphere KernSmooth quantreg uniReg]; }; diveRsity = derive2 { name="diveRsity"; version="1.9.90"; sha256="11pfq3syvjmfwfimjc2jnlprcnynvargr4yjd8h0aa6qzgdrrx5q"; depends=[ggplot2 qgraph Rcpp shiny]; }; + diverge = derive2 { name="diverge"; version="1.0.2"; sha256="117shgzcc4wds3bifa6p7li4k3p44dshcj72zr24vnqrq5m7fvkv"; depends=[truncnorm]; }; diverse = derive2 { name="diverse"; version="0.1.5"; sha256="10kmx3qv58xhqs1icsxqq0y0cm8y2hx9ysb65brd3hhg33alzvk3"; depends=[foreign proxy reshape2]; }; diversitree = derive2 { name="diversitree"; version="0.9-13"; sha256="00vi4klywi35hd170ksjv3xja3hqqbkcidcnrrlpgv4179k0azix"; depends=[ape deSolve Rcpp subplex]; }; - diversityForest = derive2 { name="diversityForest"; version="0.1.0"; sha256="1vxn0qzv509sqcg5ra94yw9anagrpvj90j9rkfh8v9bmmcj6pcjy"; depends=[Matrix Rcpp RcppEigen]; }; + diversityForest = derive2 { name="diversityForest"; version="0.2.0"; sha256="16qwmz6fmh7jxypp5myj55fx6fwzzm2mq59v30spp2c2zd89aya7"; depends=[Matrix Rcpp RcppEigen]; }; divest = derive2 { name="divest"; version="0.8.2"; sha256="0kzl3niscd88kzlpnx75xx6mk1jkwxwn7gm2a6vnhpvniyyk6rs8"; depends=[Rcpp RNifti]; }; divo = derive2 { name="divo"; version="1.0.1"; sha256="06c4kjl6llvvdr2gk480jcmj2abmqwph7x4vk5nflxm7piimvg7v"; depends=[cluster]; }; dixon = derive2 { name="dixon"; version="0.0-6"; sha256="1prvr16a9n7qyaznir2bl7mg6nlvbdv9pk75p3xipzjg36hwyam8"; depends=[spatstat splancs]; }; @@ -6938,27 +6954,28 @@ in with self; { dlookr = derive2 { name="dlookr"; version="0.3.13"; sha256="1i1aiy4v3bvlrz0w0hc5qlv5flqgzbgavqmaql6bc8nz5s9p071s"; depends=[classInt corrplot DMwR dplyr ggplot2 gridExtra kableExtra knitr magrittr mice moments prettydoc purrr RcmdrMisc RColorBrewer rlang rmarkdown rpart smbinning tibble tidyr tidyselect tinytex xtable]; }; dlsem = derive2 { name="dlsem"; version="2.4.5"; sha256="0ywcssjzkdqxlmjbsqdcgl9kivih5zw865556lnxx3zqnfygxzlv"; depends=[graph Rgraphviz]; }; dlstats = derive2 { name="dlstats"; version="0.1.3"; sha256="0inij1rzw8i683lyzvnjhfzrng7zx727y9wcijv6ny2fw64cdd6n"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; }; + dm = derive2 { name="dm"; version="0.1.1"; sha256="15268znsb90ndpq7x55lb7brg67ydshki8mc6b53c5y6b8icl5mr"; depends=[backports cli DBI dplyr DT glue igraph lifecycle magrittr pillar purrr rlang tibble tidyr tidyselect vctrs]; }; dma = derive2 { name="dma"; version="1.4-0"; sha256="003snr09hazszwqnvjrbv8vyz6ihgcfcfhrlshg451dddn920615"; depends=[MASS]; }; dmacs = derive2 { name="dmacs"; version="0.1.0"; sha256="1prw6h8sj6fcpajg6xwqhi8v5jfl74mbjdjrdy524miw56fh9h0r"; depends=[lavaan MplusAutomation]; }; dmai = derive2 { name="dmai"; version="0.4.0"; sha256="0ma89jl0l598sffpikvjj40f2djjcnjq29k6y1bav4dm2g51qgmq"; depends=[dplyr ggplot2 magrittr stringr tibble tidyr]; }; - dmdScheme = derive2 { name="dmdScheme"; version="1.0.0"; sha256="1l3s7nf0xik8q0j7krrmh1n0g06671l4p2grmswgd4s2wgjq48k2"; depends=[digest dplyr knitr magrittr openxlsx rappdirs readxl rlang rmarkdown tibble writexl xml2 yaml]; }; + dmdScheme = derive2 { name="dmdScheme"; version="1.1.0"; sha256="1s1s16jjfmlwg29wsszmnr3a70sx5gij8gi4ign2rmgwiiyfi7ra"; depends=[digest knitr magrittr openxlsx rappdirs readxl rlang rmarkdown writexl xml2 yaml]; }; dml = derive2 { name="dml"; version="1.1.0"; sha256="0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l"; depends=[lfda MASS]; }; dmm = derive2 { name="dmm"; version="2.1-5"; sha256="1i94bsgc12ysivpy9mdmzcdfki1f84x036danki7ynrbym2b3c7a"; depends=[MASS Matrix nadiv pls robustbase]; }; dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; }; dmutate = derive2 { name="dmutate"; version="0.1.2"; sha256="06gr49j5jz6ns1zydwsqysgkigi2sbm4hdd2jbb82f05rd9spyf3"; depends=[dplyr MASS]; }; - dnet = derive2 { name="dnet"; version="1.1.6"; sha256="11zvqrlwhil19fpss14fd8iq1mbz0xn0r2cibyd40hdhaixz7nkl"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; + dnet = derive2 { name="dnet"; version="1.1.7"; sha256="05mqgp8x2h6vjf8j9466kpng7bbga134c2y808qgdmjdnv9fcaxc"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; dng = derive2 { name="dng"; version="0.2.1"; sha256="0yi1fs4yvlsy3j128l7s5kwq8mhdd5fr74y2bzj7cjrxi7wgz2hg"; depends=[Rcpp]; }; dnr = derive2 { name="dnr"; version="0.3.4"; sha256="0hzaa308pppq2cqpb067f3y3nyv1p2xdmgy3dykf90psnn5v011p"; depends=[arm ergm glmnet igraph network sna]; }; do = derive2 { name="do"; version="1.1.0.0"; sha256="1v80vq8rc8ywajgi08xxkpcbhi800qjix5fyqi12ynq83wqmn93x"; depends=[data_table plyr]; }; - doBy = derive2 { name="doBy"; version="4.6-3"; sha256="1d0d6pwai1g4i5jls0jm9va29ci5hy92n5957608f3fzi1jwy635"; depends=[broom Deriv dplyr magrittr MASS Matrix pbkrtest plyr tibble]; }; + doBy = derive2 { name="doBy"; version="4.6.5"; sha256="1ckazh701b4ilg8bj17ji903538jmb49d997gm49ah5j5jc1x0g7"; depends=[broom Deriv dplyr magrittr MASS Matrix pbkrtest plyr tibble]; }; doFuture = derive2 { name="doFuture"; version="0.9.0"; sha256="1sfymhgjph1xrw49dxyc2slxxgal7v4yanklr4zql7r4vqinhk19"; depends=[foreach future globals iterators]; }; doMC = derive2 { name="doMC"; version="1.3.6"; sha256="1cn9gxavhvjswip8pwvkpi7q6wpzdllcsdjabga8akf55nggqxr9"; depends=[foreach iterators]; }; doMPI = derive2 { name="doMPI"; version="0.2.2"; sha256="0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938"; depends=[foreach iterators Rmpi]; }; doParallel = derive2 { name="doParallel"; version="1.0.15"; sha256="0vnqbha3gig3awbfvsfx3ni5jir398md1n7xmsb8jihnjsk7xbbi"; depends=[foreach iterators]; }; - doRNG = derive2 { name="doRNG"; version="1.7.1"; sha256="1sb75aqkliprglfxc4x4wds6alqgzhvl2n812g1d32a88ra3slr7"; depends=[foreach iterators pkgmaker rngtools]; }; - doRedis = derive2 { name="doRedis"; version="1.1.1"; sha256="10ldfzq6m83b9w24az9bf5wbfm6y9gi233s8qgsk4dnr84n3nizx"; depends=[foreach iterators rredis]; }; + doRNG = derive2 { name="doRNG"; version="1.8.2"; sha256="1jff27zzrvd1fd61x2m9468h8xn3s1c9f6wibviy5zdhj5dx9s9k"; depends=[foreach iterators rngtools]; }; + doRedis = derive2 { name="doRedis"; version="2.0.0"; sha256="0lw8j339az2dgcrahmkhp7k5dpvy1dalk1sfsjp2hzfhm3xqabc8"; depends=[foreach iterators redux]; }; doSNOW = derive2 { name="doSNOW"; version="1.0.18"; sha256="0rj72z5505cprh6wykhhiz08l9bmd966srqh2qypwivf321bvrvh"; depends=[foreach iterators snow]; }; - dobin = derive2 { name="dobin"; version="1.0.1"; sha256="11k97bmgigkiqkz9r5ilap5l2xdpwprl9v7f73rckxcw6pwsnlk3"; depends=[FNN pracma]; }; + dobin = derive2 { name="dobin"; version="1.0.2"; sha256="1vhvwdl7a8bf4q64jz8a6afm3smdn3jgxvs17jjlilarpdazl3p5"; depends=[pracma RANN]; }; dobson = derive2 { name="dobson"; version="0.4"; sha256="0xfn7s3wzrv1md40bdjrnjfiqyxg5c6lrcpnvayjdgrhxq161hhq"; depends=[]; }; dockerfiler = derive2 { name="dockerfiler"; version="0.1.3"; sha256="128648s9lj96p3nlxwy4gs108w5kjcg6w48nfx3r52gb8w2z7948"; depends=[attempt glue R6]; }; docknitr = derive2 { name="docknitr"; version="1.0.1"; sha256="1mhdjv6yznzyx911f0m3m0i7jlzj7h12ikkxb9b6zj68bdplv30b"; depends=[knitr rstudioapi sys]; }; @@ -6975,7 +6992,7 @@ in with self; { doex = derive2 { name="doex"; version="1.2"; sha256="1r999z30ipa04pgck0hfalqxihb1bj8sdhlkkhf4plb7maaz3qm3"; depends=[]; }; dominanceanalysis = derive2 { name="dominanceanalysis"; version="1.3.0"; sha256="0850z2ppdgbfwbv8l40ngl00n4mdj4ciky1g918zazd3jrg88s38"; depends=[]; }; domino = derive2 { name="domino"; version="0.3.1"; sha256="0f67w0z5jy82kgm3l1rji430ayigw30vmmwp3i1nz0xibsx7jxv4"; depends=[]; }; - donut = derive2 { name="donut"; version="1.0.0"; sha256="1m10kcdcr9ma4zmc1gj3lyza8zxvnn57wvxznaappaba4a5b47v2"; depends=[]; }; + donut = derive2 { name="donut"; version="1.0.1"; sha256="17qiy9j0qm2q2gcysd5717bdl9nmkd7pd5z22pcj3icvxcpssval"; depends=[]; }; doremi = derive2 { name="doremi"; version="0.1.1"; sha256="1h36sj60l5sd5ybbdyrv0wkr9p18j7iwg111khq0znb71xi5nzp7"; depends=[data_table ggplot2 lme4 lmerTest zoo]; }; dosearch = derive2 { name="dosearch"; version="1.0.4"; sha256="1hq85jym0plf8hj77bfd623nhyjgfqqzm1w92n3lii3j5lv9vrwg"; depends=[Rcpp]; }; dosresmeta = derive2 { name="dosresmeta"; version="2.0.1"; sha256="0qdalzdk7q4wx3vl5f3i64m8cb7vhi4pqzghar32j0a7l6gla04z"; depends=[mvmeta]; }; @@ -6987,6 +7004,7 @@ in with self; { doubcens = derive2 { name="doubcens"; version="1.1"; sha256="1hn65n67by3xqbcnaf5jja5pli0g6wpbbz2sfzd7i2nms7kiywhp"; depends=[]; }; double_truncation = derive2 { name="double.truncation"; version="1.4"; sha256="190fwl119ycmiszkq0mqc6dh8adwqx7b0ipmhz71qvqdzgh9gjm9"; depends=[]; }; downloader = derive2 { name="downloader"; version="0.4"; sha256="1axggnsc27zzgr7snf41j3zd1vp3nfpmq4zj4d01axc709dyg40q"; depends=[digest]; }; + downloadthis = derive2 { name="downloadthis"; version="0.1.1"; sha256="0rairvwxk12q0w7w8w8nmcylay5ib8fvklphxa0r4jzgqf80v14n"; depends=[base64enc bsplus fs htmltools magrittr mime purrr readr rmarkdown writexl]; }; downscale = derive2 { name="downscale"; version="3.0-1"; sha256="0kmv4d5fa6mmhmbfqfxzk1gv55j15d7madsdqi8470bwh0kkya4y"; depends=[cubature minpack_lm raster Rmpfr sp]; }; downscaledl = derive2 { name="downscaledl"; version="1.0"; sha256="0lqxngzpxj65b48j5w0n8dg6fp4lgg5zpgxc2wj6d9wh5f97l71b"; depends=[dplyr keras magrittr raster Rcpp RcppArmadillo rgdal rstack sp tensorflow]; }; downsize = derive2 { name="downsize"; version="0.2.2"; sha256="18b9shd79z0bsdnp0apqqwv6c73j4wnfiv41ywqz761nmxbldxbn"; depends=[magrittr R_utils]; }; @@ -6994,10 +7012,9 @@ in with self; { dparser = derive2 { name="dparser"; version="0.1.8"; sha256="1yx425s3iq03j043g41pyfp3cgmajb4qh50zirhd0qpplzwy8xj5"; depends=[digest]; }; dpcR = derive2 { name="dpcR"; version="0.5"; sha256="17l9g11qqs2fkskg331889m8nkkrwzrq0n684rdn62pnd5j2n5pi"; depends=[binom chipPCR dgof e1071 evd multcomp pracma qpcR rateratio_test readxl shiny signal spatstat]; }; dpcid = derive2 { name="dpcid"; version="1.0"; sha256="1gx8gyrxvm07mjiasl0b80y0x3crq6gy170v6s817d11jw44n86z"; depends=[]; }; - dpglasso = derive2 { name="dpglasso"; version="1.0"; sha256="1mx28xbm2z2bxyp33wv2v6vgn1yfsdsa0bzjjdxasgd6lvr51myf"; depends=[]; }; dplR = derive2 { name="dplR"; version="1.7.0"; sha256="1ylzki6wvsbcxlz4k532a8yh0kwc6817vkbks7l060acssbycipr"; depends=[digest lattice Matrix matrixStats plyr png R_utils signal stringi stringr XML]; }; dplRCon = derive2 { name="dplRCon"; version="1.0"; sha256="10xnawgnhxp5y949fxs1vvadc1qz2ldy0s9w9w7kf6iqh59d35sw"; depends=[]; }; - dplyr = derive2 { name="dplyr"; version="0.8.3"; sha256="032c89wa04g9rih9shyvwl3il0bsrv3xk489x6867sk9bb3amd38"; depends=[assertthat BH glue magrittr pkgconfig plogr R6 Rcpp rlang tibble tidyselect]; }; + dplyr = derive2 { name="dplyr"; version="0.8.5"; sha256="0602b4a9nffxx67q57csqp87nkrv33nn9wlaw1458yys9fzx6l2p"; depends=[assertthat BH ellipsis glue magrittr pkgconfig plogr R6 Rcpp rlang tibble tidyselect]; }; dplyr_teradata = derive2 { name="dplyr.teradata"; version="0.3.2"; sha256="1pq630hlvpfrhaxqn6yh0kgapgibrnbic78g130d40visak60j1p"; depends=[bit64 DBI dbplyr dplyr odbc rstudioapi]; }; dplyrAssist = derive2 { name="dplyrAssist"; version="0.1.0"; sha256="1lqizh70b1apyr4578917gv6s0i7p84ak96a57kvwipmh36a4ywn"; depends=[DT magrittr miniUI plyr rstudioapi shiny shinyAce shinyWidgets stringr tidyr tidyverse]; }; dpmr = derive2 { name="dpmr"; version="0.1.9"; sha256="1cnjywkvjb4fhbf4shjmsrq47f1fg2x21hcm1q5512bm0wg9i6jd"; depends=[digest httr jsonlite magrittr rio]; }; @@ -7011,7 +7028,7 @@ in with self; { dragon = derive2 { name="dragon"; version="0.2.1"; sha256="1y2dav9151zdcqw1maxhh3s4c1syk5rs8yb8grx8xkffvg5123w7"; depends=[broom colorspace colourpicker cowplot DT igraph magrittr RColorBrewer shiny shinyBS shinydashboard shinythemes shinyWidgets tidyverse visNetwork]; }; dragonking = derive2 { name="dragonking"; version="0.1.0"; sha256="01b01wd1s2b8sa9f0kfbf2pbzhaqra7xxskigqh3vlj389xqm1id"; depends=[]; }; dragulaR = derive2 { name="dragulaR"; version="0.3.1"; sha256="1cw5v7m1b4pxsizsjb3zdzhydxj577p6q5fcjklsvpzmiixzlyav"; depends=[htmlwidgets shiny shinyjs]; }; - drake = derive2 { name="drake"; version="7.9.0"; sha256="1p3d14yi65p7x2hpvfhvwpbaasawvj3i0h9ws1ic4c096gclw1b3"; depends=[base64url digest igraph rlang storr txtq vctrs]; }; + drake = derive2 { name="drake"; version="7.11.0"; sha256="0yhbf3znpr78gsis0bmnb2ygbsfv2l9551ddsx9rbj72x7w2xzgi"; depends=[base64url digest igraph rlang storr txtq vctrs]; }; drat = derive2 { name="drat"; version="0.1.5"; sha256="0i80c4hyclwnq8g8amvdid9pwr11mwbscwydaxmvbrbhv3qzjg6d"; depends=[]; }; draw = derive2 { name="draw"; version="1.0.0"; sha256="0kbz8rcgygl4fhmljzaan5jl7wjvfljcaykm7q9lw9s6m78p06gz"; depends=[]; }; drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; }; @@ -7022,7 +7039,6 @@ in with self; { drmdel = derive2 { name="drmdel"; version="1.3.1"; sha256="1bpm9jj9dxk2daxp1yb7pn9jd750p27qa84vdfxpacm5r0mggnys"; depends=[]; }; dropR = derive2 { name="dropR"; version="0.1"; sha256="0sw5lqlfdn64dbykxdhk1pz18f83if871vkapa2nxgcfiy79b0vs"; depends=[plyr shiny]; }; droptest = derive2 { name="droptest"; version="0.1.3"; sha256="1wlfhj6c4pb5mcybyd2bcn55y3azk7dv7d7il97qwbhl8kf59csl"; depends=[data_table]; }; - drsmooth = derive2 { name="drsmooth"; version="1.9.0"; sha256="1wgi961bvbsnq4bygxbpy4sy5fy34lrrkaaj0r2rxcahwa1sc38n"; depends=[boot car DTK lubridate mgcv multcomp pgirmess segmented]; }; drtmle = derive2 { name="drtmle"; version="1.0.5"; sha256="1gnzprdjs4aws5q92a0dmlfzpwi3in3rsylbwr0r6cnghymgs69s"; depends=[doFuture future future_apply future_batchtools np SuperLearner]; }; drugCombo = derive2 { name="drugCombo"; version="1.1.1"; sha256="0f4akxmj5jd89jm7kzkmqksxmb6fqj7jawvm3hpw6limyry3mp4z"; depends=[BIGL Deriv ggplot2 minpack_lm nlme rgl]; }; drumr = derive2 { name="drumr"; version="0.1.0"; sha256="09xi3sf424bpq10fq25j209dylfbi1lfd911r44ffadkxzvp5p1s"; depends=[audio stringr]; }; @@ -7030,33 +7046,35 @@ in with self; { ds4psy = derive2 { name="ds4psy"; version="0.1.0"; sha256="15knnl0ld8vnb3mv06p7425h7w5y5m598k4dny8svqwranhs856a"; depends=[cowplot ggplot2 here readr stringr tibble tidyr tidyverse unikn]; }; dsa = derive2 { name="dsa"; version="0.70.3"; sha256="0ilfrrfdvw86p6q5jskh0fqnqrcz75j2ldzhvwfpbdr9bh65jfai"; depends=[dygraphs extrafont forecast ggplot2 gridExtra htmlwidgets R2HTML reshape2 rJava timeDate tsoutliers xtable xts zoo]; }; dsample = derive2 { name="dsample"; version="0.91.2.2"; sha256="18c0zxaqwgbn9kmkwlnicwd74ljy2sxj0b9ksif13pdlj3zn57h1"; depends=[MASS]; }; - dscore = derive2 { name="dscore"; version="1.0.0"; sha256="1569bv769izsbqslbij69nq5lagd2676zavs9fkwbsqw7j9nb5x0"; depends=[dplyr Rcpp RcppArmadillo stringr tidyr]; }; - dse = derive2 { name="dse"; version="2015.12-1"; sha256="1976h57zallhzq43nshg77bsykcvkfwnasha1w59c44fjpl1gs9w"; depends=[setRNG tfplot tframe]; }; + dscore = derive2 { name="dscore"; version="1.1.0"; sha256="1rdih79aqps484fqxgr48m8c7xnl3dbjxqvax9k261mqpm2xk8lp"; depends=[dplyr Rcpp RcppArmadillo stringr tidyr]; }; + dse = derive2 { name="dse"; version="2020.2-1"; sha256="170rxrniszs8h59ah4mn4mz8d7kzix4g3vlz4icd8w6bl40c6ykc"; depends=[setRNG tfplot tframe]; }; dslabs = derive2 { name="dslabs"; version="0.7.3"; sha256="0fhd6zwa4lmgrrybywvj1vxd98a483yca605dj2pwipqifh1x6ka"; depends=[ggplot2]; }; dslice = derive2 { name="dslice"; version="1.2.0"; sha256="1k9hxpmr563p8bpd9m991lx5ig366mzk9j1lzldci9pq4jiayin1"; depends=[ggplot2 Rcpp scales]; }; - dsm = derive2 { name="dsm"; version="2.2.17"; sha256="0n2nn05zb8zd2wah1cfzv8a9qwbh6an3jwsfy0x6lbkk63bs5mxw"; depends=[ggplot2 mgcv mrds nlme numDeriv plyr statmod]; }; dsmodels = derive2 { name="dsmodels"; version="1.1.0"; sha256="0gidxi4ph49mjm2hdf9flphfb9916al4cpdkiig504n7ms2sbpbg"; depends=[latex2exp pryr shape]; }; dsr = derive2 { name="dsr"; version="0.2.2"; sha256="0bs5aspi2khs9n60q7d2ah6zv4rzhbyk2bafd17c12jzjqlh1228"; depends=[dplyr frailtypack rlang]; }; dsrTest = derive2 { name="dsrTest"; version="0.2.1"; sha256="1kljlfi7jf6fa8b5f3wxjsa9rlmzcp4qix3m2qyapz2lqd85mbb7"; depends=[asht exactci loglognorm]; }; - dssd = derive2 { name="dssd"; version="0.2.0"; sha256="0g99aaywqlvs9ycb3mkbkziclvrsdknpv3jg340z03panph4yr1q"; depends=[lwgeom plot3D rgdal sf]; }; + dssd = derive2 { name="dssd"; version="0.2.1"; sha256="0lfr3bb3nba6pkg13d3kiblbp4naqxcdkvdqsa0y1zlhak74cgcj"; depends=[plot3D rgdal sf]; }; dst = derive2 { name="dst"; version="1.4.0"; sha256="0zr04m33ky98y5n6jbczcfn898i7y8zc1hygfm8p9rrnw93d2lin"; depends=[]; }; dstat = derive2 { name="dstat"; version="1.0.4"; sha256="023jp0xdbg200ww1gnr3fzgjqd82acag0jps7q6j6m27q11psvgz"; depends=[]; }; dtangle = derive2 { name="dtangle"; version="2.0.9"; sha256="0yg1fbrqixqp93vdw3grvz1la5l2kidgs730qp6yihkp3260cxf3"; depends=[DEoptimR]; }; + dti = derive2 { name="dti"; version="1.5.1"; sha256="08da7v7sl88g2jixfplvw9rc5rvlifq3fvyrgh9naa5jsmd8h5ia"; depends=[adimpro aws awsMethods gsl oro_dicom oro_nifti quadprog rgl]; }; dtp = derive2 { name="dtp"; version="0.1.0"; sha256="0qy8nrbq22bfbajkxq6blkq7583pc5mb392gmqb3c9daxmqn42vb"; depends=[Formula gtools plyr]; }; dtpcrm = derive2 { name="dtpcrm"; version="0.1.1"; sha256="0k25fm0z3snpx1v2kwd50svgnkjhn5c0hy1gnlw2lif6rjz1fzd9"; depends=[dfcrm diagram]; }; dtplyr = derive2 { name="dtplyr"; version="1.0.1"; sha256="0jgisglpaj1n6jhwqwsa1583i4ifazqdd9hh581w5akx5p0f05mp"; depends=[crayon data_table dplyr rlang tibble tidyselect]; }; dtree = derive2 { name="dtree"; version="0.4.2"; sha256="1cpv0pyf515610djxzfw1c83p3alk5a93clg4x9gk7a7qy4cyhr1"; depends=[caret evtree party partykit rpart]; }; dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; - dttr2 = derive2 { name="dttr2"; version="0.0.1"; sha256="042zll9hw4ljwr85x4dmkv8nz6r0mpawaa5s58ngxypshss8sbg0"; depends=[checkr hms]; }; + dttr2 = derive2 { name="dttr2"; version="0.1.0"; sha256="0fy4prwbg1jr27d6xfs46gyrqn21w513vq48cgw7pyls7zrqigys"; depends=[chk hms lifecycle]; }; dtw = derive2 { name="dtw"; version="1.21-3"; sha256="02hyhx1sy5h3vzh9zixy18a7d47df4k5d0wyflcvlcbsbcl6p90s"; depends=[proxy]; }; - dtwSat = derive2 { name="dtwSat"; version="0.2.5"; sha256="0qvjzqmi6plkq5l4r52c7wil58n41l5f5dxzpk9r4yis8bdm5zlq"; depends=[caret dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer Rdpack reshape2 rgdal scales snow sp xtable zoo]; }; + dtwSat = derive2 { name="dtwSat"; version="0.2.6"; sha256="1mx3xxhf2ywi6cia47sn77wzxd8rg9wir7r8dx92k5dvawr425ki"; depends=[caret data_table dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer Rdpack reshape2 rgdal scales snow sp xtable zoo]; }; dtwclust = derive2 { name="dtwclust"; version="5.5.6"; sha256="05dszmj89id2hk9apxa7721737s6292w2l7vazj7aqwk1jyghjpm"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel RcppThread reshape2 RSpectra shiny shinyjs]; }; dual = derive2 { name="dual"; version="0.0.3"; sha256="1alxh9mj610m7wgr6a97mpzy5ia9vzckhz6wmxyix7xh9mzbn1gw"; depends=[]; }; + dualtrees = derive2 { name="dualtrees"; version="0.1.4"; sha256="05mxwiwnv48jf6ya5qmfc7g2w8wkzhk56k9g0gr2m4cpfab7d5h2"; depends=[]; }; duawranglr = derive2 { name="duawranglr"; version="0.6.5"; sha256="04w8ll6p8m0ljcp96sfp028afgxddk4wyncfdwiywi0ps34zh084"; depends=[digest dplyr haven readr readxl]; }; dub = derive2 { name="dub"; version="0.2.0"; sha256="066lzyk44380mf17vx4db4a3a4rs7zl85mj5hjg172khjbqnbixw"; depends=[]; }; duckduckr = derive2 { name="duckduckr"; version="1.0.0"; sha256="1wki8xvqp5hr27iafd9jbryl9faywfkdkpn0pa0afywbic39k2cm"; depends=[crul jsonlite]; }; dummies = derive2 { name="dummies"; version="1.5.6"; sha256="01f84crqx17xd6xy55qxlvsj3knm8lhw7jl26p2rh2w3y0nvqlbm"; depends=[]; }; dummy = derive2 { name="dummy"; version="0.1.3"; sha256="081a5h33gw6ym4isy91h6mcf247c2vsdygv9ll07a3mgjcjnk79p"; depends=[]; }; + dundermifflin = derive2 { name="dundermifflin"; version="0.1.1"; sha256="0rp8p4ln92kfxkczl7vi9r2jhxb1ky203s02940cjjkczsphpcc1"; depends=[crayon stringi]; }; dunn_test = derive2 { name="dunn.test"; version="1.3.5"; sha256="0lqwvyl3pyygfc73nf81gzw3zl3w43r7ki0yw2dgrzhkpb2iji4a"; depends=[]; }; dupiR = derive2 { name="dupiR"; version="1.2"; sha256="0p649yw7iz6hnp7rqa2gk3dqkjbqx1f6fzpf1xh9088nbf3bhhz3"; depends=[plotrix]; }; dupree = derive2 { name="dupree"; version="0.2.0"; sha256="12dlqmvk2zlxh283xjf2d6x12cy6r3rsy88y5g40h9002m7i2jqy"; depends=[dplyr lintr magrittr purrr rlang stringdist tibble]; }; @@ -7080,7 +7098,7 @@ in with self; { dynamo = derive2 { name="dynamo"; version="1.0"; sha256="0arsv686ix7xpca57ayqgifim1q35dl4w2mx7fw8bc0lidapilyp"; depends=[abind glamlasso MortalitySmooth Rcpp RcppArmadillo]; }; dynatopmodel = derive2 { name="dynatopmodel"; version="1.2.1"; sha256="0lpfhj69bvagqzzg2kjqvn9xx8f93ii34flrrns20z3bxla6gds9"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; }; dyncomp = derive2 { name="dyncomp"; version="0.0.2-1"; sha256="13wp2k8nbgrbrqng2dmgy0ixgidk51wq9y7mv5pdbvdajxdsyh11"; depends=[zoo]; }; - dyndimred = derive2 { name="dyndimred"; version="1.0.2"; sha256="1iqn28vl1vf0jbs0jrngg711lzsrliksvxyf1c8d9zp8k4glris0"; depends=[dynutils irlba]; }; + dyndimred = derive2 { name="dyndimred"; version="1.0.3"; sha256="03znghb5nygggwfmy9id07fn1wfkhwyzyzahdrlx68pg03dhlbg5"; depends=[dynutils irlba lmds]; }; dynetNLAResistance = derive2 { name="dynetNLAResistance"; version="0.1.0"; sha256="018y3m648ni31rlisjfnrx1d10mm48wpxanlnnxxpnqxjcywg2x8"; depends=[doParallel foreach igraph]; }; dynfrail = derive2 { name="dynfrail"; version="0.5.2"; sha256="1q7ml24j0ycy2bwpa14vl96315ni7x9rfp0qmf36w00mylgc3ry6"; depends=[dplyr magrittr Rcpp RcppArmadillo survival tibble tidyr]; }; dynia = derive2 { name="dynia"; version="0.2"; sha256="1swip4kqjln3wsa9xl0g92zklqafarva923nw7s44g4pjdy73d5l"; depends=[]; }; @@ -7089,12 +7107,12 @@ in with self; { dynparam = derive2 { name="dynparam"; version="1.0.0"; sha256="0rzkksb0j7vybz4mk9c4sm3zcxdjll1bqx54cbal8a0iq259rigp"; depends=[assertthat carrier dplyr dynutils Hmisc magrittr purrr stringr testthat tibble tidyr]; }; dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; }; dynprog = derive2 { name="dynprog"; version="0.1.1"; sha256="11zsx2c4hv7k22pw85aa01zk4r0qpzwnf73ynylkfxfbi87rda9s"; depends=[rlang]; }; - dynr = derive2 { name="dynr"; version="0.1.15-1"; sha256="1vd93mckc8q8wvs3sgly7j1vn1i2qis6pcyqiag6nqz5xjfv6rn4"; depends=[car deSolve fda ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 stringi tibble xtable]; }; - dynsbm = derive2 { name="dynsbm"; version="0.6"; sha256="0sdy42ihymhzx577jc2qr7lwirc9lviz3sagfy09zhbwizz5a4kw"; depends=[RColorBrewer Rcpp riverplot]; }; + dynr = derive2 { name="dynr"; version="0.1.15-25"; sha256="1kwrx1wg7hwgwkdgws8pvdv2yj5m77xp7fnpxlj50c7xm3chjm78"; depends=[car deSolve fda ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 stringi tibble xtable]; }; + dynsbm = derive2 { name="dynsbm"; version="0.7"; sha256="169yk539vynjbn89q6vs3l3fx7hk8n3i1msa4jws5vypgljc2rir"; depends=[RColorBrewer Rcpp riverplot]; }; dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; }; dynsurv = derive2 { name="dynsurv"; version="0.3-7"; sha256="0ar8n84fpfy68cx321syg8hvjxjnh00mw0a9sid9dw58f956phf8"; depends=[BH ggplot2 nleqslv plyr reshape survival]; }; - dynutils = derive2 { name="dynutils"; version="1.0.4"; sha256="1rzwcfbv5aqa08fy9i1fiz4a7v3z2skyyjz392rjsbwpnlk77ryh"; depends=[assertthat crayon desc dplyr magrittr Matrix proxyC purrr Rcpp remotes stringr tibble]; }; - dynwrap = derive2 { name="dynwrap"; version="1.1.4"; sha256="11c8rd9yv54a7g1ypdniw4vchcpa3lbijnh67srp6fymrlf82z7d"; depends=[assertthat babelwhale crayon dplyr dynparam dynutils FNN glue hdf5r igraph jsonlite magrittr Matrix processx purrr readr reshape2 stringr testthat tibble tidyr yaml]; }; + dynutils = derive2 { name="dynutils"; version="1.0.5"; sha256="1vcnz0yrss64i8pw459z2kp17b0fqgw41rpxbzpixhsqsz9sy22x"; depends=[assertthat crayon desc dplyr magrittr Matrix proxyC purrr Rcpp remotes stringr tibble]; }; + dynwrap = derive2 { name="dynwrap"; version="1.2.0"; sha256="10j1lp3118ad4q09i0ml162lq33mlipr22nfib120mzx5dj3fgp2"; depends=[assertthat babelwhale crayon dplyr dynparam dynutils FNN glue igraph magrittr Matrix processx purrr readr reshape2 stringr testthat tibble tidyr yaml]; }; e1071 = derive2 { name="e1071"; version="1.7-3"; sha256="0pf2pjb590z0jikgv1037xcp7dq06mg3dzmyffjw6gk7dd9blbdv"; depends=[class]; }; eAnalytics = derive2 { name="eAnalytics"; version="0.1.4"; sha256="15hhd4q2yxzq3a3awvk81ixa43hk519ym8ap7v1ahghyr0njnyyf"; depends=[dplyr DT energyr googleVis leaflet plotly shiny shinydashboard shinytest shinyWidgets]; }; eChem = derive2 { name="eChem"; version="1.0.0"; sha256="0wmf204hqd4s5har5l9bkcbrbmbqbb8m11w2aivi2gs98f3hy51p"; depends=[animation plot3D]; }; @@ -7104,20 +7122,20 @@ in with self; { eNetXplorer = derive2 { name="eNetXplorer"; version="1.1.0"; sha256="1n84rf9axvvjf6s0mamf5z889hg3y32mhypasmxc455698z3d1k5"; depends=[calibrate expm glmnet gplots Matrix progress RColorBrewer survcomp survival survivalROC]; }; ePCR = derive2 { name="ePCR"; version="0.9.9-11"; sha256="0bkvjvygdnzcc23sslgkcrx11mzwgsqss37lwnbr7rq0jp1sw46s"; depends=[Bolstad2 glmnet hamlet impute pracma survival timeROC]; }; eRTG3D = derive2 { name="eRTG3D"; version="0.6.2"; sha256="04m39jkp4lvv145wmcswc87qx36wpfkm95kq9fik8a3jb5myvjll"; depends=[CircStats ggplot2 gridExtra pbapply plotly plyr raster rasterVis sp tiff]; }; - eRm = derive2 { name="eRm"; version="1.0-0"; sha256="11p8j61arq1ih2qi33wf0442vcdbp3zvknzm5aknsifwl4mbzzly"; depends=[lattice MASS Matrix]; }; + eRm = derive2 { name="eRm"; version="1.0-1"; sha256="0njqzznnhnkvalmhiq5yq1w7gwp2myki5cv61w42ydvd27hdyyg9"; depends=[colorspace lattice MASS Matrix psych]; }; eSDM = derive2 { name="eSDM"; version="0.3.2"; sha256="0vjphknba4a6y1wdgv9v6r3a6kj088fq83b4387d4z72g0kkwcmc"; depends=[colorRamps colourpicker dichromat dplyr DT leaflet lwgeom purrr raster RColorBrewer rlang ROCR sf shiny shinycssloaders shinydashboard shinyjs tmap units viridis zip]; }; - eaf = derive2 { name="eaf"; version="1.8"; sha256="1plzvfa2vs3njky7xk9dvic2xapdnzb5iycrksv0qj03ylbh6410"; depends=[modeltools]; }; + eaf = derive2 { name="eaf"; version="1.9-1"; sha256="0h7nilqa11s4casalilmk4ssgcl1lqn1w4033zxgc20y7f9rxhsg"; depends=[modeltools]; }; earlyR = derive2 { name="earlyR"; version="0.0.1"; sha256="14davqhh3n5dfsddnfd79ni56bssrpwhvkqkdb77a8x9fn8w32pv"; depends=[distcrete EpiEstim epitrix]; }; earlygating = derive2 { name="earlygating"; version="1.0"; sha256="0y6xjkh9p8bvanc9p5sycah8v81k85xr8i7vyvjb9g4a64srwhd7"; depends=[betareg doParallel foreach]; }; earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; }; earth = derive2 { name="earth"; version="5.1.2"; sha256="13a8qfv94bqnjkacnr0nz1g8yd99cnyz4k2qslyclrckqbl9hvrj"; depends=[Formula plotmo TeachingDemos]; }; - earthtide = derive2 { name="earthtide"; version="0.0.9"; sha256="14i1ihswvspqlis9h9m4xfjmhqwz1nj6blhdzqanvd05abw6qnkx"; depends=[BH R6 Rcpp RcppArmadillo RcppParallel]; }; + earthtide = derive2 { name="earthtide"; version="0.0.10"; sha256="09cd4vwkl33zgdwvhvi9jl6za9w61zjj9fyq3x2cxz4hgj346fbm"; depends=[BH R6 Rcpp RcppArmadillo RcppParallel]; }; earthtones = derive2 { name="earthtones"; version="0.1.1"; sha256="17biiw0ig8i8ihc2f8csp0bqryygg27ic2v1vrf81ax3qzhngy4l"; depends=[ggmap]; }; easyAHP = derive2 { name="easyAHP"; version="0.1.1"; sha256="161mn90j9ph1p9277mj61hch8ndcv7k9izs32q93y5wp474gzynd"; depends=[]; }; easyCODA = derive2 { name="easyCODA"; version="0.31.1"; sha256="1g3k8a06zsif5a7xma4dz5zcdbxyc6i58jf5rnnyypxhj6xm5abc"; depends=[ca ellipse vegan]; }; easyDes = derive2 { name="easyDes"; version="5.0"; sha256="1msybgv4b7xlvp93lk64mdrqprr5qqc9ma1bz7glchhlkyyl8c21"; depends=[multcomp PMCMRplus]; }; - easyNCDF = derive2 { name="easyNCDF"; version="0.0.4"; sha256="1hd7b6pdm5j41a4v0jxhbqdy2bz5gj86fsfwj0l7gg7h32d6hkhq"; depends=[abind ncdf4]; }; - easyPSID = derive2 { name="easyPSID"; version="0.1.0"; sha256="10373pbgkgc2aizff54qx95yixlcdbp3xbwlml0lm2rm449bjd6x"; depends=[foreign LaF stringr]; }; + easyNCDF = derive2 { name="easyNCDF"; version="0.1.0"; sha256="1p6b1lcbw2ix6hqqghgfid5yd58yqg1cqnj99r5svli3ivr7x6js"; depends=[abind ClimProjDiags ncdf4]; }; + easyPSID = derive2 { name="easyPSID"; version="0.1.1"; sha256="07m560j8bpzifik305ix33b26xg7w4xjn7lz9g9gp120cqs765dx"; depends=[foreign LaF stringr]; }; easyPubMed = derive2 { name="easyPubMed"; version="2.13"; sha256="1wd8idyqz7kgygp34mjp2abx82775ry8l07vsqdlqnc6fdnvg55d"; depends=[]; }; easySVG = derive2 { name="easySVG"; version="0.1.0"; sha256="03gl5gl0yqgpygd4kna79wrhflbnq3zrz3iq2i8hk9xqd83mszh3"; depends=[]; }; easySdcTable = derive2 { name="easySdcTable"; version="0.3.3"; sha256="0hhi1nwc84b0mjs2sw2qmvj3cmfkk9kr3rni9fkyyds1dhwgrvvh"; depends=[sdcTable shiny SSBtools]; }; @@ -7128,44 +7146,41 @@ in with self; { easynls = derive2 { name="easynls"; version="5.0"; sha256="1ma2q4y5dxk6q99v880vqfsgy1fha96j7pi8ch699l0pi6bx0d6c"; depends=[]; }; easypackages = derive2 { name="easypackages"; version="0.1.0"; sha256="00paxdwz4bw3imqhcsw6hj1h0gmnpishlxcj79n826vhdy23jc4y"; depends=[assertthat devtools]; }; easypower = derive2 { name="easypower"; version="1.0.1"; sha256="1vf0zv55yf96wjxja6ifdjvgc9nw0jl0hnc1ygyjd8pmwbgdz9bl"; depends=[pwr]; }; + easyr = derive2 { name="easyr"; version="0.2-0"; sha256="16z5b67wpyaagkpaiw0w5s3gp0djpa6pzb7k6aihsa59ag1k1f3i"; depends=[data_table digest dplyr foreign glue Hmisc lubridate openssl readxl rlang stringr tibble XML]; }; easyreg = derive2 { name="easyreg"; version="4.0"; sha256="1w4wlhziyhdyldm0zgnm73fnxrh0fv8hwcw5j8ircxb4npx7bcgg"; depends=[nlme]; }; ebGenotyping = derive2 { name="ebGenotyping"; version="2.0.1"; sha256="1jllzc7kvvckrws8qhgvwy626llyb68sp1davp7swx48sf7rwcxc"; depends=[]; }; ebSNP = derive2 { name="ebSNP"; version="1.0"; sha256="0x3ijwg4yycsfy6jch1zvakzfvdgpiq8i7sqdp5assb8z1823w0b"; depends=[]; }; eba = derive2 { name="eba"; version="1.9-0"; sha256="1xbjd7n895wzzybpjf634a1jpbwqxwh7l17phz6zv7h6dfw19nx4"; depends=[nlme psychotools]; }; ebal = derive2 { name="ebal"; version="0.1-6"; sha256="1cpinmbrgxxv0fzi9qi2inv4hw2lz7iq4b0ggp316rdqqb5bj9r0"; depends=[]; }; ebdbNet = derive2 { name="ebdbNet"; version="1.2.5"; sha256="0kal4sqx12y04696ilwnwkmss4rn16dkbnalgqimz6i4jhz8n23h"; depends=[igraph]; }; - ebimetagenomics = derive2 { name="ebimetagenomics"; version="0.6"; sha256="0jaz7l71pnf3i2q83mx0pjqli9sn30a4b9vshcmp70v3h6xdj9wx"; depends=[breakaway sads vegan]; }; - ebirdst = derive2 { name="ebirdst"; version="0.1.0"; sha256="1bj4jb2cg08z58p9ih9c9f3jfy8xxm4rz99hdm29282dy37xn7dz"; depends=[car data_table dplyr fasterize gbm ggplot2 gridExtra mgcv PresenceAbsence rappdirs raster rgdal scales sf stringr tidyr viridisLite xml2]; }; + ebirdst = derive2 { name="ebirdst"; version="0.2.0"; sha256="1wpcbgs2a032zwyp1xzxm4wws6yjkzr16r9fifp91yw5pn2h72fd"; depends=[car data_table dplyr fasterize ggplot2 gridExtra mgcv PresenceAbsence rappdirs raster rgdal rlang scales sf stringr tidyr viridisLite xml2]; }; ebmc = derive2 { name="ebmc"; version="1.0.0"; sha256="0v9hkzy8ljddmi6wdjd1jga4ib566ikr1vgrvxba67ka524r6bbp"; depends=[C50 DMwR e1071 pROC randomForest rpart]; }; ebreg = derive2 { name="ebreg"; version="0.1.0"; sha256="033ldzj9r9y14nq5bsy1ds9vys8imk1ysii8b889zd1bi319b05y"; depends=[lars Rdpack]; }; ecb = derive2 { name="ecb"; version="0.2"; sha256="17hj4d48j6rran64ajzlgkgz17mab51fa3lz8rm3mw0qhahkjlmc"; depends=[curl httr rsdmx xml2]; }; ecd = derive2 { name="ecd"; version="0.9.1"; sha256="0d8mf5q6n7k5qj6kxvrb3habl0qmn2rxv814kydkrz2bg0scvm1q"; depends=[digest ggplot2 gridExtra gsl moments optimx polynom RcppFaddeeva Rmpfr RSQLite stabledist xtable xts yaml zoo]; }; ecdfHT = derive2 { name="ecdfHT"; version="0.1.1"; sha256="1n3n9n86pj8c54l3xvp7knvi0ajbnjmz9pi79p7wfq92a90fqx48"; depends=[rgl]; }; - ecespa = derive2 { name="ecespa"; version="1.1-10"; sha256="1n6wvz463w0ainn9a52arjhs5q9pwciknb5328pr6y287fwa3nnn"; depends=[spatstat]; }; + ecespa = derive2 { name="ecespa"; version="1.1-11"; sha256="154zny4ny5cbba9wpm2wmgvsi7wl77aiagc660xpwfvpiwmbxsmk"; depends=[spatstat]; }; echarts4r = derive2 { name="echarts4r"; version="0.2.3"; sha256="0yxgxwsyhmbnw3llcgr4xh0i0d74awgsapdw7xsh57wzc539666m"; depends=[broom corrplot countrycode d3r data_tree dplyr htmltools htmlwidgets jsonlite magrittr purrr scales shiny stringi]; }; echelon = derive2 { name="echelon"; version="0.1.0"; sha256="0dw15igx8jwgfr1f7p5pspxjiqhqmfp7shdhq8g07f4bj76irzm4"; depends=[]; }; echo_find = derive2 { name="echo.find"; version="3.0"; sha256="15rrja2z01y4pbh2w4h2xcnwv9c81ppnb848203vavvlilm475y1"; depends=[boot minpack_lm]; }; echogram = derive2 { name="echogram"; version="0.1.2"; sha256="0kir7x32fk3fc63kr3b2j0hfkmivs2pwrlxyjvdg7xqc59hjp3ma"; depends=[geosphere readHAC]; }; - echor = derive2 { name="echor"; version="0.1.3"; sha256="1m843219038jvmwd5fsnlh63nl7as7d4030i6wnksg6pw6v6f1s8"; depends=[dplyr geojsonsf httr lubridate plyr purrr readr rlang tibble tidyr]; }; - ecipex = derive2 { name="ecipex"; version="1.0"; sha256="0pzmrpnis52hvy80p3k60mg9xldq6fx8g9n3nnqi3z56wxmqpdv7"; depends=[CHNOSZ]; }; + echor = derive2 { name="echor"; version="0.1.4"; sha256="0c14nhq97m7m0597ss0qddr9dys7sf3qw2pw0gfwr4xmk2bzdxih"; depends=[dplyr geojsonsf httr plyr purrr readr rlang tibble tidyr]; }; + ecipex = derive2 { name="ecipex"; version="1.1"; sha256="16iyi6n0pnyfmy47b0ranjbh3spvq8cgkmcamzhgjfj7qn0ix184"; depends=[CHNOSZ]; }; eclust = derive2 { name="eclust"; version="0.1.0"; sha256="01x327w02m357lngmgv3drni2s67sass25xk9vni1z434n8i4428"; depends=[caret data_table dynamicTreeCut magrittr pacman pander stringr WGCNA]; }; ecm = derive2 { name="ecm"; version="4.4.0"; sha256="1f9x3lcihvnkc5fr4g94h0m5a9h4rjmq9hkjs34il2id8bw92gj7"; depends=[car]; }; - ecmwfr = derive2 { name="ecmwfr"; version="1.2.1"; sha256="0crqmr3rph0xkxkfgl3rz3aqc75vh7kn7sjnixspg04mh2p27cpb"; depends=[httr keyring memoise]; }; - eco = derive2 { name="eco"; version="4.0-1"; sha256="08fblbr9qp2v0cp69hy68c18xjqvx0nsnx42n2vd1gc6r7apapj6"; depends=[MASS]; }; + ecmwfr = derive2 { name="ecmwfr"; version="1.2.2"; sha256="0gr1cqvl6p3x63kqg8v1xnk8h6g1acqb3agq9p51zqzcx40hdsrc"; depends=[curl getPass httr keyring memoise]; }; ecodist = derive2 { name="ecodist"; version="2.0.3"; sha256="1fhlsiywvfyw03dhbwk2g9blymsjvzhcbwdsqn59bmdjk7aiy79x"; depends=[]; }; - ecoengine = derive2 { name="ecoengine"; version="1.11.0"; sha256="1d5x6hvqrqjj0wg07m4dbgb9ljdq73ibavzy2q5magnfn50a7rzm"; depends=[assertthat data_table dplyr httr jsonlite lubridate magrittr plyr whisker]; }; ecolMod = derive2 { name="ecolMod"; version="1.2.6"; sha256="1n30faldfhpm2jkaw793vr220kgn3bmn8hxhw32rax294krmwn4v"; depends=[deSolve diagram rootSolve shape]; }; ecolottery = derive2 { name="ecolottery"; version="1.0.0"; sha256="0w5aq1aaqzz74vlj8hgnmn60l8rdrchx022dpspqnpvpzdlh65z5"; depends=[abc ggplot2]; }; econet = derive2 { name="econet"; version="0.1.81"; sha256="0hm1v4fjzyzdaxiw6lar7fxnqsckis3n7nrsravhbllhcf0aqq7w"; depends=[bbmle dplyr igraph intergraph MASS Matrix minpack_lm plyr sna spatstat_utils tnet]; }; - econetwork = derive2 { name="econetwork"; version="0.2"; sha256="0ilqxyvpkiwhhgml19f1rf08bn061nf76d7fby3084ypgc4iwi1b"; depends=[igraph Matrix_utils rdiversity]; }; - economiccomplexity = derive2 { name="economiccomplexity"; version="0.3"; sha256="058cyzr01jrgi9090wn8vpjhf074bq7g76vfbyk58jic0k78k634"; depends=[dplyr igraph magrittr Matrix rlang tibble tidyr]; }; + econetwork = derive2 { name="econetwork"; version="0.3"; sha256="1id17gcbfv5sx1lhyf7qcqqn5y3qdd5pv1svxxjam3smpdymax3y"; depends=[igraph Matrix_utils rdiversity]; }; + economiccomplexity = derive2 { name="economiccomplexity"; version="1.0"; sha256="1bqayzpfz26lb985l66j27qybyqx0148fiikb8diamq0mbx3picc"; depends=[igraph Matrix]; }; econullnetr = derive2 { name="econullnetr"; version="0.2.0"; sha256="1amgwcsm42ffrdx5a11nkvdx37qqjfh7z54z1hl4b07n8rg1rp7c"; depends=[bipartite gtools reshape2]; }; ecoreg = derive2 { name="ecoreg"; version="0.2.2"; sha256="1yzyqvhshgc7ip251y7hsvip4xwf8i92bvvz84mn0mzv5b4mq3im"; depends=[]; }; ecoseries = derive2 { name="ecoseries"; version="0.1.5"; sha256="1q35hp5hl6z28hns5rnp3mjn6hqp5qh714pagw7fw4d4a6wnvacy"; depends=[magrittr RCurl readr rjson rvest tibble xml2 zoo]; }; ecosim = derive2 { name="ecosim"; version="1.3-1"; sha256="0gpgjswqmibnz9lpcidvw3y1wmd38l4lyha4fbs0agiz6yyfiyjn"; depends=[deSolve stoichcalc]; }; ecospace = derive2 { name="ecospace"; version="1.3.1"; sha256="0xrhlhpndycj2hdf50lygymc1hwmczx74r6l9f2qmm6v90c0729k"; depends=[FD]; }; - ecospat = derive2 { name="ecospat"; version="3.0"; sha256="1c9cbxs022f2bjnvgdfxhmqkzr30svna596r1fn5i7zsqd7dm0w6"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators maptools MigClim poibin PresenceAbsence randomForest raster rms snowfall sp spatstat vegan]; }; - ecotox = derive2 { name="ecotox"; version="1.4.1"; sha256="12dfnsvqwk4iy8r3iks51hh1gcj3hhws10hsng6daqc0xp1y6dpr"; depends=[tibble]; }; + ecotox = derive2 { name="ecotox"; version="1.4.2"; sha256="0i4wjarg8gj4hfr0d4fqk74ymhkzrq3vkklpv5v1511ci19hpv16"; depends=[tibble]; }; ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; }; ecoval = derive2 { name="ecoval"; version="1.2.5"; sha256="0rlgi8cd7jdybb2dqx6ndp8rg02bvsvhksmh8vk8g5fg2wk0rll3"; depends=[jpeg rivernet utility]; }; ecp = derive2 { name="ecp"; version="3.1.2"; sha256="11f9p869xr0zg779i46gmflxlq4xclk9wxbab0nj2fan26pn4sfy"; depends=[Rcpp]; }; @@ -7174,12 +7189,11 @@ in with self; { ed50 = derive2 { name="ed50"; version="0.1.1"; sha256="058p1750ba5hp4rczi26grgwjia2ny1880v1vfp6wxad13r459pq"; depends=[boot]; }; ed50simulation = derive2 { name="ed50simulation"; version="0.1.1"; sha256="00fknpssrpin8bpjhf2lsjx3lbpinrmqa6jzmgy3nslkc51x0939"; depends=[boot]; }; eda4treeR = derive2 { name="eda4treeR"; version="0.2.0"; sha256="0fh6nfgvbkvjm1f0b292ggi0mr8ylq5pg2wp8cph46j8rhbgbdxz"; depends=[dae dplyr emmeans ggplot2 lme4 magrittr pbkrtest tidyverse]; }; - edarf = derive2 { name="edarf"; version="1.1.1"; sha256="0f27hs7vn4v2jis3d66s48hr0ki8m8ndspcw1cwns5vjwb77iqwm"; depends=[data_table ggplot2 mmpf]; }; edcc = derive2 { name="edcc"; version="1.0-0"; sha256="036fi6mnn9480hkb378xb5jilkfvdydjmkyw4mcc9s1lz195f62w"; depends=[spc]; }; edci = derive2 { name="edci"; version="1.1-3"; sha256="1f1ry2adfranfrrvf1gkiy58pra3z6bray4v5fgr0z9n1ybcaff0"; depends=[]; }; eddi = derive2 { name="eddi"; version="0.0.1"; sha256="19cgrqdcji509igb6rmlwb75xyyvrh34nv6zyjjfcsc31p5nvf95"; depends=[raster rgdal]; }; edeR = derive2 { name="edeR"; version="1.0.0"; sha256="1dg0aqm5c4zyf015hz1hhn3m4lfvybc4gc1s7sp8jcsk46rxz0cc"; depends=[rJava rjson rJython]; }; - edeaR = derive2 { name="edeaR"; version="0.8.3"; sha256="18v85mzs5gys3x4vj9dh941xxbfajlp6zly2q7pf842hs33fipbi"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue hms lubridate miniUI purrr rlang shiny shinyTime stringr tibble tidyr zoo]; }; + edeaR = derive2 { name="edeaR"; version="0.8.4"; sha256="14skrsgnd4nslmhi3cpg5v8vz8q11diywd5ad0wbr01aak2bv10c"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue hms lubridate miniUI purrr rlang shiny shinyTime stringr tibble tidyr zoo]; }; edf = derive2 { name="edf"; version="1.0.0"; sha256="14ikm6j0ndxrk7c7lh5mbd2aci46d4j9a30mvcgnxy3kq6046a7b"; depends=[]; }; edfReader = derive2 { name="edfReader"; version="1.2.1"; sha256="076far4fhd6rpa6fwffad4cgchjvar135yblvlrm33s9pd5bf0hn"; depends=[]; }; edfun = derive2 { name="edfun"; version="0.2.0"; sha256="1wxx6bgy03z7c1d6556bbjl1cb49n2vn734fw2d5c1jk0zsh3fmz"; depends=[]; }; @@ -7193,7 +7207,6 @@ in with self; { edstan = derive2 { name="edstan"; version="1.0.6"; sha256="1gm1rxwywigyfdlcm2yj1m9qjb4s6w7chr1ck7b32x1pdxdl3ns5"; depends=[ggplot2 rstan]; }; educineq = derive2 { name="educineq"; version="0.1.0"; sha256="0qd6kvcy280glv3q6lcrawmnsfvp90as95chgi3hav0yj2dpakn6"; depends=[flexsurv ineq]; }; eechidna = derive2 { name="eechidna"; version="1.4.0"; sha256="07537brbdinkrmygbd2galyl6acbcbg2pkjafkdhxdgklpxv7j9m"; depends=[colourpicker dplyr ggplot2 ggthemes magrittr plotly purrr rgdal rgeos shiny sp stringi tibble tidyr tidyselect]; }; - eefAnalytics = derive2 { name="eefAnalytics"; version="1.0.6"; sha256="07wpz8zlgkbzkhmv569w7rnz3i830391arrh17sg2gc4fx9h1559"; depends=[geoR lme4 metafor mvtnorm]; }; eegkit = derive2 { name="eegkit"; version="1.0-4"; sha256="1r1lack4ps9hwqq56rq37431rcxf3x79zgvda6vrmh4s0ziy6v4x"; depends=[bigsplines eegkitdata ica rgl signal]; }; eegkitdata = derive2 { name="eegkitdata"; version="1.0"; sha256="1krsadhamv1m8im8sa1yfl7injvrc4vv3p88ps1mpn8hibk5g51m"; depends=[]; }; eel = derive2 { name="eel"; version="1.1"; sha256="0cv6dhw57yy140g73z94g9x1s42fpyfliv9cm2z1alm7xwap1l0x"; depends=[emplik rootSolve]; }; @@ -7203,25 +7216,23 @@ in with self; { effectFusion = derive2 { name="effectFusion"; version="1.1.2"; sha256="0m392wrkmgvys7a2bk2w1swfkjikkllng8sy8wb8s2j9y6c3wanp"; depends=[bayesm cluster ggplot2 GreedyEPL gridExtra MASS Matrix mcclust]; }; effectR = derive2 { name="effectR"; version="1.0.2"; sha256="1icr1sx98x3h8rbky1agdh809arhjqcypyajl7y50yis8a5pkycb"; depends=[ggplot2 reshape2 rmarkdown seqinr shiny viridis]; }; effects = derive2 { name="effects"; version="4.1-4"; sha256="1jbpyji7qn5hz8a6afsfbng0nx0a7w0v3v51wpmnbipfjchyalhy"; depends=[carData colorspace estimability lattice lme4 nnet survey]; }; - effectsize = derive2 { name="effectsize"; version="0.0.1"; sha256="07vgmxdl75798hgdh90zysafjh97rmmj2wjjyr6xff4fbhi8rlkb"; depends=[bayestestR insight parameters]; }; + effectsize = derive2 { name="effectsize"; version="0.2.0"; sha256="1liix8rf8xq3hzi7684bl0s20iflsq6g5mxr5k59wp2qwn1i6aww"; depends=[bayestestR insight parameters]; }; effectsizescr = derive2 { name="effectsizescr"; version="0.1.0"; sha256="0shfjk6r3bz04jakrn5nwgymjx60lk83i0akcx7zqfxp3k8yncs5"; depends=[Kendall]; }; efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; }; - effsize = derive2 { name="effsize"; version="0.7.6"; sha256="129vs8kp10h6yhrrmn77518120bmfr55l6nkpbxkvylnr641b5a2"; depends=[]; }; + effsize = derive2 { name="effsize"; version="0.7.8"; sha256="1y1r2xjcj3w1ccx475q00alrxd6mw0afhzajl5hllhqyc4ympnb6"; depends=[]; }; efreadr = derive2 { name="efreadr"; version="0.2.2"; sha256="1h27by1m451wrnw017005avs5yj3fjzrm2lq5153aqm1mbbxxwvs"; depends=[dplyr ensurer magrittr readr]; }; efts = derive2 { name="efts"; version="0.9-0"; sha256="1cdn37sij3q73z9gal6x3nnnds55whfj5ywyww119hx092xcb2h4"; depends=[lubridate magrittr ncdf4 plyr stringr udunits2 xts]; }; ega = derive2 { name="ega"; version="2.0.0"; sha256="04kwh24aap22yclmcrix3vi553qb30hd43mgfzpdl0cw3ibrh7xg"; depends=[ggplot2 mgcv]; }; egcm = derive2 { name="egcm"; version="1.0.12"; sha256="0nssf5six1j7z6fss7478zdbsfx60myzw833m7nsnaf1r8n4ixaf"; depends=[ggplot2 MASS pracma quantmod tseries urca xts zoo]; }; egg = derive2 { name="egg"; version="0.4.5"; sha256="1fy7srpiavfn8kyrr1m84an7acgwi6ydzrg71m3b0vk7y9ybmj0m"; depends=[ggplot2 gridExtra gtable]; }; eggCounts = derive2 { name="eggCounts"; version="2.3"; sha256="0y74dd8s406yz6nhwlb09hgarw90a68wji2vykxpqcrfll814g7q"; depends=[BH boot coda lattice numbers Rcpp RcppEigen rootSolve rstan StanHeaders]; }; - egoTERGM = derive2 { name="egoTERGM"; version="2.1.1"; sha256="1zp3kr7s43rjp45qbd6lv48mbmby5rrz1vdz9s64v43rjm8v2jyz"; depends=[boot btergm ergm GGally Matrix network sna speedglm xergm_common]; }; - egor = derive2 { name="egor"; version="0.19.10"; sha256="0s9s15j1v5z2v8jhfz8zrmfl43hmn7rw1afs1wjw1kvzz41k1jlm"; depends=[dplyr igraph network plyr purrr rlang shiny survey tibble tidygraph tidyr]; }; + egor = derive2 { name="egor"; version="0.20.03"; sha256="03np4p2pf1nc5rmzg9wxjrqi7h3f7672l574cfi731j0yw8bfcwx"; depends=[dplyr igraph network purrr rlang shiny survey tibble tidygraph tidyr]; }; eha = derive2 { name="eha"; version="2.8.0"; sha256="0nsspy1v780hlvhbpp78ybmxrwqbj12nz98pnh495dnlkq5fa5h5"; depends=[survival]; }; ehaGoF = derive2 { name="ehaGoF"; version="0.1.0"; sha256="1qrx9rmf4ifasxycnzj06xn3gl0gp9w1vplb4wrghiziqw5cqird"; depends=[]; }; ehelp = derive2 { name="ehelp"; version="1.1.1"; sha256="1sd8g0a94dg8l568srxxsvyc0nmvbsy1rq75sn8cc2cdxv4vilq8"; depends=[]; }; ei = derive2 { name="ei"; version="1.3-3"; sha256="0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix sp tmvtnorm ucminf]; }; eiCompare = derive2 { name="eiCompare"; version="2.1"; sha256="0kv4k1zk1gz3fapy2i2ydy0n38hy95i10r3hr3dx8mkkf3nsj46h"; depends=[cubature data_table ei eiPack ellipse foreach ggplot2 magrittr mnormt msm mvtnorm plotrix plyr R_utils stringr tidyr tmvtnorm ucminf]; }; - eiPack = derive2 { name="eiPack"; version="0.1-9"; sha256="1rivccqfr5hz80xgfw652993zg0pw7yd0by52hyp7bwm89gsjksq"; depends=[coda MASS msm]; }; - eiPartialID = derive2 { name="eiPartialID"; version="0.1.2"; sha256="0721p89llzjznz2b6zlf54v7fy9lb9c5qb7w8q0l582iy5cwaw35"; depends=[eco MASS sandwich]; }; + eiPack = derive2 { name="eiPack"; version="0.2-1"; sha256="0xcgl9pr6d960zhp8fd944ba5p5ybp520lp2a4jgsj1lcvqf8xbn"; depends=[coda MASS msm]; }; eia = derive2 { name="eia"; version="0.3.4"; sha256="1yjrgmf6s9c35wpgpg66gi0wmfynm3kbcyaknsw44blpkd35c6yq"; depends=[dplyr httr jsonlite lubridate magrittr memoise purrr readxl tibble]; }; eigeninv = derive2 { name="eigeninv"; version="2011.8-1"; sha256="18dh29js824d7mrvmq3a33gl05fyldzvgi8mmmr477573iy9r30g"; depends=[]; }; eigenmodel = derive2 { name="eigenmodel"; version="1.11"; sha256="1l3n0z736xf3x6cyxzmmq1jb2glxi2b75z7v39y4471knh6nbb4d"; depends=[]; }; @@ -7230,7 +7241,8 @@ in with self; { eive = derive2 { name="eive"; version="2.3"; sha256="073hwx944db7zxq6yib6yvciaic11k49zl1iqphippcd5ygkad80"; depends=[Rcpp]; }; eivtools = derive2 { name="eivtools"; version="0.1-8"; sha256="0ynmrql6dv10m7cwba5mzwlbvp6ab53nzqqvk3ihwyiqzmnnmpk4"; depends=[R2jags]; }; eiwild = derive2 { name="eiwild"; version="0.6.7"; sha256="1fp4kvlmcjjnzn2a5cmlzaf6y5q6cdbbi2nmvjyqc4y1bmwh3srf"; depends=[coda gtools lattice]; }; - eixport = derive2 { name="eixport"; version="0.4.0"; sha256="06knza8mm7d8i1h72axq3s9id1cdrrq0gjc6lc3q65hf5hx89k1q"; depends=[cptcity ncdf4 raster sf sfheaders silicate sp tidyr]; }; + eixport = derive2 { name="eixport"; version="0.4.5"; sha256="13c717ws4b71x2dd7x33v72plqkd88nhsbxr0w3wm09xfana7l5b"; depends=[cptcity ncdf4 raster sf sfheaders silicate sp tidyr]; }; + elaborator = derive2 { name="elaborator"; version="1.0"; sha256="1jhs1hiwlww0sr3yacg5amr1mhwjwa10b374klrkkvzzw2y20p1x"; depends=[bsplus dendextend dplyr forcats gclus haven plotly purrr RColorBrewer reshape2 rlang seriation shape shiny shinyBS shinycssloaders shinydashboard shinyjs shinyWidgets tidyr V8]; }; elasso = derive2 { name="elasso"; version="1.1"; sha256="0nz3vw803dvk4s45zc9swyrkjwna94z84dn4vfj3j17h74a0cij2"; depends=[glmnet SiZer]; }; elastic = derive2 { name="elastic"; version="1.1.0"; sha256="1xg8gqa0maasx85fbff4vid2r8s0fgzj4iswyayybzik99zb26ly"; depends=[crul curl jsonlite R6]; }; elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; }; @@ -7255,21 +7267,22 @@ in with self; { elliptic = derive2 { name="elliptic"; version="1.4-0"; sha256="1dhba0yfxjd5rlqsxp5a7s2hclfkla9wigsr39dlma67l6qjjmxn"; depends=[MASS]; }; elmNNRcpp = derive2 { name="elmNNRcpp"; version="1.0.1"; sha256="1n71b5pqd1szhmp4q1h9aqgkx7s54f5i3xk5nljwzsn7cyih1kb3"; depends=[KernelKnn Rcpp RcppArmadillo]; }; elo = derive2 { name="elo"; version="2.1.1"; sha256="1i6qcw2plw12v065142kx58d911zr1gcsd1xic152zxvh89nmhxx"; depends=[pROC Rcpp]; }; - emIRT = derive2 { name="emIRT"; version="0.0.9"; sha256="0861xa299qkdmmbxl2zsr1al4ysznzbx4yj9z655mrm9b11sh4bj"; depends=[pscl Rcpp RcppArmadillo]; }; + emIRT = derive2 { name="emIRT"; version="0.0.11"; sha256="1h91q9vi9cv14bmkaakyynw2z9sx51w0c2kw2in0x91wx7scmd0p"; depends=[pscl Rcpp RcppArmadillo]; }; emax_glm = derive2 { name="emax.glm"; version="0.1.2"; sha256="04di6bp97cxjbbszakb64y15bjmnd2j8zvxdj8gdbgmhxk9wmbwd"; depends=[AER MASS pander pracma pROC]; }; - emba = derive2 { name="emba"; version="0.1.1"; sha256="0sgh97jzfxna4dww8xmj1qy5435d4lm2yar2ra6nf416snlppjxv"; depends=[Ckmeans_1d_dp igraph magrittr rje usefun visNetwork]; }; - embed = derive2 { name="embed"; version="0.0.5"; sha256="0iwhif1yq3wb6xy0k03w0ygyl8rlcal0h2ncxc9rwqlny8xgvxph"; depends=[dplyr generics keras lme4 purrr recipes rlang rstanarm tensorflow tibble tidyr uwot withr]; }; + emayili = derive2 { name="emayili"; version="0.3.9"; sha256="0cc4i0d56k1l87ifa0x9vpfw0615hk7hzgyxfp68fh5yrj0fc6ab"; depends=[base64enc curl glue httr magrittr mime stringi]; }; + emba = derive2 { name="emba"; version="0.1.2"; sha256="0bf0wvzhjr0xig9rz6jkb08bb6jfv8za48lyqgp9fkkv1nnz9hjg"; depends=[Ckmeans_1d_dp igraph magrittr purrr rje usefun visNetwork]; }; + embed = derive2 { name="embed"; version="0.0.6"; sha256="1bwr32923b04cnvsm3pqzsw4rnihjqdfpqkh6pga520dw9x2w1dd"; depends=[dplyr generics keras lme4 purrr recipes rlang rstanarm tensorflow tibble tidyr uwot withr]; }; embryogrowth = derive2 { name="embryogrowth"; version="7.6"; sha256="0bsg904jikb1dqichkinpgm0difg17sfczw6q4zab6r02s7yb53s"; depends=[deSolve HelpersMG numDeriv optimx]; }; - emdbook = derive2 { name="emdbook"; version="1.3.11"; sha256="0a515jdzvg87npvrh7md7zp0v5nlz7c2jr7pba5dql6slb0d8j7q"; depends=[bbmle coda lattice MASS plyr]; }; - emdi = derive2 { name="emdi"; version="1.1.6"; sha256="1zxbbn0rl2z7zksh1k8wznry4k1bs08ipla1kaxyadj3i2wdk2y3"; depends=[boot ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 rgeos]; }; + emdbook = derive2 { name="emdbook"; version="1.3.12"; sha256="0ls3zxxlwmdv7zn1v9i1y9zc2sn0hbgmyjvsj7zn3ajsw7wwlih6"; depends=[bbmle coda lattice MASS plyr]; }; + emdi = derive2 { name="emdi"; version="1.1.7"; sha256="0zkvkw4vbr19zc6ac1yvg8nsd70zl1vkdxlcydsadybgff4kq55b"; depends=[boot ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 rgeos]; }; emdist = derive2 { name="emdist"; version="0.3-1"; sha256="1z14pb9z9nkd0f2c8pln4hzkfqa9dk9n3vg8czc8jiv0ndnqi7rq"; depends=[]; }; emg = derive2 { name="emg"; version="1.0.8"; sha256="05j96ch20nca4dci25w0m9y8l6yhm26fapkmm4rfqg6si8agr52s"; depends=[moments]; }; emhawkes = derive2 { name="emhawkes"; version="0.9.0"; sha256="1h6map6w66q91s6g1qr9wfk589cbvva1banqrxzzf29g7ihl15vh"; depends=[maxLik]; }; - emld = derive2 { name="emld"; version="0.3.0"; sha256="16f1za636bbdp9y5mq40n2v77l2zbmwrph870wm12rmn7cjl9bwq"; depends=[jsonld jsonlite xml2 yaml]; }; + emld = derive2 { name="emld"; version="0.4.0"; sha256="16ikzkvl4xn7ixa4sfh21isx2gpppvx5ajpann26f35645pm51xk"; depends=[jsonld jsonlite xml2 yaml]; }; emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; }; emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; }; - emmeans = derive2 { name="emmeans"; version="1.4.3.01"; sha256="16v5j31516nbqnj2zhgqvyp5yxd4zcs5zi0aspa5plr2qikvrkmg"; depends=[estimability mvtnorm numDeriv plyr xtable]; }; - emoa = derive2 { name="emoa"; version="0.5-0"; sha256="1wcnsnkdmpcn21dyql5dmj728n794bmfr6g9hgh9apzbhn4cri8p"; depends=[]; }; + emmeans = derive2 { name="emmeans"; version="1.4.5"; sha256="10fmvmd6q4zjr6b18hhc85mwrzv778qzj6lwl9kbs2fsfvsgw7mm"; depends=[estimability mvtnorm numDeriv plyr xtable]; }; + emoa = derive2 { name="emoa"; version="0.5-0.1"; sha256="0rkr4d4fyqxmsrlbzar27z97qkw4cl1dkvfnhbdwpgg9fi1cixmz"; depends=[]; }; emojifont = derive2 { name="emojifont"; version="0.5.3"; sha256="1cdrrl3hvrs8rskyy6zgr7q2mmg8yb9k8sld1m64zsp7y009g19k"; depends=[ggplot2 proto showtext sysfonts]; }; emon = derive2 { name="emon"; version="1.3.2"; sha256="19khjjpyxvzhzihqq15w02l5v5ryyvxlklz1ch2gkmqcpnvyga32"; depends=[MASS mgcv]; }; emov = derive2 { name="emov"; version="0.1.1"; sha256="04w0bjyxvfb4ky573byp7j9b7x4gqycr5pgpnsl6rzag00zsf45a"; depends=[]; }; @@ -7277,14 +7290,15 @@ in with self; { empiricalFDR_DESeq2 = derive2 { name="empiricalFDR.DESeq2"; version="1.0.3"; sha256="0h2mcdw4v3ac6dn0s4z37l4sdzbi12sxrnn0f0gc9z207dyyf6w3"; depends=[DESeq2 GenomicRanges]; }; emplik = derive2 { name="emplik"; version="1.0-4.3"; sha256="1g4hz85bvw29c77zs0ig487z92jjl682vv457x81l077h0psvk7c"; depends=[quantreg]; }; emplik2 = derive2 { name="emplik2"; version="1.21"; sha256="1980bwc4fc4rwzlwya030n5rv8rq0s82hnw955mvaxrbmicnqlla"; depends=[]; }; - ems = derive2 { name="ems"; version="1.2.7"; sha256="1l4javnfhlb6y40dpdvri2795yj0s9zqf8bi02s5llx5lcq3bxbd"; depends=[]; }; + ems = derive2 { name="ems"; version="1.3.2"; sha256="1ambmd183f9959kwms71q3ks187y2ngpab45xlclpm2108n5j3pb"; depends=[boot rms survival]; }; emstreeR = derive2 { name="emstreeR"; version="2.2.0"; sha256="1qbv61j2ya6zvyp8494xi8dhjlb58jmqil9cm5z0pr7p2sr6l32r"; depends=[BBmisc BH ggplot2 Rcpp RcppArmadillo RcppMLPACK scatterplot3d]; }; emuR = derive2 { name="emuR"; version="2.0.4"; sha256="152lg7sf98a7qrblz1ryjdpsprk2arfzwlq8z7b4ilr771lq0plw"; depends=[base64enc compare DBI dplyr git2r httpuv jsonlite MASS mime purrr RCurl readr rlang RSQLite rstudioapi shiny stringr tibble tidyr uuid wrassp]; }; emulator = derive2 { name="emulator"; version="1.2-20"; sha256="11z25iqyzck0s4hw0i86i9jsi52w9bjxx3zdpafssyfqfk7z5avw"; depends=[mvtnorm]; }; - enaR = derive2 { name="enaR"; version="3.0.0"; sha256="0sy7k8l6b8p34bcf9bpjr1y6qkjkvn77y2w2ws7ivcr1fynrhm5p"; depends=[gdata limSolve MASS network sna stringr]; }; + enRich = derive2 { name="enRich"; version="3.1"; sha256="0xl9rhz6mflzp1g5d51xz74dsm8qp16jbkflhzrha3vfirn2jh8q"; depends=[]; }; enc = derive2 { name="enc"; version="0.2.2"; sha256="16x8cckw0ah2yfczvv4j1jy4f8m23fkac38fz068964sv4l8z645"; depends=[]; }; encode = derive2 { name="encode"; version="0.3.6"; sha256="04zwclmqasbx54m77wqfr9jg4axhkkqnykaxv3if8lnr46fl3zyc"; depends=[]; }; encryptr = derive2 { name="encryptr"; version="0.1.3"; sha256="01gsimhrb9c7k5d9h5dbvm4h9i7fc9vzi8wgqb5f191ki27fsw9w"; depends=[dplyr knitr openssl purrr readr rlang]; }; + endoSwitch = derive2 { name="endoSwitch"; version="1.0.0"; sha256="1cj4skk317ppnayk1ph63vll49vs74fljc25cn1iviwgjq64ly0k"; depends=[data_table maxLik msm]; }; endogMNP = derive2 { name="endogMNP"; version="0.2-1"; sha256="0maxcp321ngbxrg0i23nlwhj849v771xahh53367x928ss4f8v7i"; depends=[]; }; endogenous = derive2 { name="endogenous"; version="1.0"; sha256="079fmfxl9gf080zq5m1ixmgry9dawg2y6ixbfyc5da5jxf3zk9h8"; depends=[mvtnorm]; }; endorse = derive2 { name="endorse"; version="1.6.1"; sha256="067wrb5vhi9qn66rwp38cb4kss2yc55blh5dnl99fsvpc0qs146p"; depends=[coda]; }; @@ -7296,7 +7310,6 @@ in with self; { engsoccerdata = derive2 { name="engsoccerdata"; version="0.1.5"; sha256="06fdgjgnk4lwshrkd0jad411x5nz9sxlri9fdhxrf2dr2hik4l8q"; depends=[dplyr magrittr tidyr]; }; enpls = derive2 { name="enpls"; version="6.1"; sha256="12088v9xnj5b3dlakqz1hbzxz4mdai7xi7s2fpx8lj3y3lx7znmb"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; }; enrichR = derive2 { name="enrichR"; version="2.1"; sha256="0ymhzs9d2wl0s9rvbqc1hqb78mlzwhlc7mmijpfqkm5r720pf6m1"; depends=[httr rjson]; }; - enrichvs = derive2 { name="enrichvs"; version="0.0.5"; sha256="0x91s03hz1yprddm6mqi75bm45ki3yapfrxmap7d4qc0hi06h22k"; depends=[]; }; enrichwith = derive2 { name="enrichwith"; version="0.3.1"; sha256="05fhx323ani86wdxbjp8dgw4d1iq4kr1887646w072a6iq93bwhm"; depends=[]; }; ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.5"; sha256="0p744151pbj278lyc8d8p7rc20n70abpfgxz6jr10jarmq3r6x7l"; depends=[chron]; }; ensembleMOS = derive2 { name="ensembleMOS"; version="0.8.2"; sha256="16d8030zfdwifqrh45vz3gf5n0bix0mhsmsnydgjq1fghdklcmyx"; depends=[chron ensembleBMA evd]; }; @@ -7304,13 +7317,14 @@ in with self; { ensemblepp = derive2 { name="ensemblepp"; version="1.0-0"; sha256="08k7v61p2sgr07dklabl0g7apsn9da60sfb14gfrwipwi8bsd4pv"; depends=[]; }; ensr = derive2 { name="ensr"; version="0.1.0"; sha256="18b81iswvby7k5akbfdyc6a8j1621d4d35hxmgjip5kyvf5cb3p8"; depends=[data_table ggplot2 glmnet]; }; ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; }; + entcn = derive2 { name="entcn"; version="0.1.0"; sha256="0wpa1293d1bdlx8pikzfh4vqhw7p45bi140aj3x4m8p21h5b4gd6"; depends=[bitops RCurl rjson RYoudaoTranslate stringr]; }; entropart = derive2 { name="entropart"; version="1.6-4"; sha256="1wr3pkn786crklsjzg1kq3dm1ks230jp391g31cgf5hfm537c3qb"; depends=[ade4 ape EntropyEstimation ggplot2 ggpubr reshape2 SPECIES vegan]; }; entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; }; - entrymodels = derive2 { name="entrymodels"; version="0.1.0"; sha256="0clyv5ws5nnnyys596zbmdndds43xrvnnkbdk59kj3wscw0hq982"; depends=[dplyr magrittr readr]; }; + entrymodels = derive2 { name="entrymodels"; version="0.2.0"; sha256="18byy6ky37n0a3ixrl6jik9pqbv07sbfkm9vb7wrziyywdfqmzp8"; depends=[dplyr magrittr readr]; }; envDocument = derive2 { name="envDocument"; version="2.4.1"; sha256="074m7adnasvys28kjdgj9071fi90vsl4yv5zvpxik4crlx098dlw"; depends=[]; }; envalysis = derive2 { name="envalysis"; version="0.3.3"; sha256="1ys93g5gxr9x1v4hg98dcpwa40n5xkh1j8drrmpnmxwq6gv01r6r"; depends=[drc ggplot2]; }; enveomics_R = derive2 { name="enveomics.R"; version="1.7.0"; sha256="0nk356svi25lzw5iza0jmg6krxhizilm7ja3sgym65319jpcflbp"; depends=[fitdistrplus investr sn]; }; - enviGCMS = derive2 { name="enviGCMS"; version="0.5.7"; sha256="00hydrvawm2zx6d8dcfd5p5l01lvrk5hsfq8k67b2iysjn2sh531"; depends=[animation BiocParallel broom crosstalk data_table dplyr DT genefilter ggplot2 ggraph ggridges igraph iterators itertools mixtools plotly rcdk RColorBrewer reshape2 rmarkdown shiny shinythemes]; }; + enviGCMS = derive2 { name="enviGCMS"; version="0.6.0"; sha256="0d0a7zv3nlsk8dq7wn3mg0nnvry56r9zm4y593mr1shcnmfm6nyn"; depends=[animation BiocParallel broom crosstalk data_table dplyr DT genefilter ggplot2 ggraph ggridges igraph mixtools plotly RColorBrewer Rdisop reshape2 rmarkdown shiny shinythemes]; }; enviPat = derive2 { name="enviPat"; version="2.4"; sha256="1gvb7jmwwh4l44b50xmrq3bysr2iv6442yh9pdk6n81g3bgpz1d0"; depends=[]; }; enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; }; envirem = derive2 { name="envirem"; version="2.1"; sha256="175190l81r24v6ygr759l4qwi4i3v6n57jmgswamr01px4pvhxag"; depends=[huxtable palinsol raster RSAGA sp]; }; @@ -7318,38 +7332,38 @@ in with self; { envnames = derive2 { name="envnames"; version="0.4.0"; sha256="12mfbcksrp733jycasaiavlsmx138xmjpywly1wha4ds6bfw93hr"; depends=[]; }; envoutliers = derive2 { name="envoutliers"; version="1.0.0"; sha256="1wkd6xpsw5n9jx0qq5p88h6j8vkcyiyajd3zb6im5bc4d73nmi07"; depends=[car changepoint ecp ismev lokern MASS robustbase]; }; eoR = derive2 { name="eoR"; version="0.4.0"; sha256="0vn4s4af94n9h6x7z14qwpz94rgsd5m3mv55wva7x3h99ryhm83s"; depends=[data_table]; }; - eoffice = derive2 { name="eoffice"; version="0.1.8"; sha256="03yjw8yy3x81hnisiznx2gch4flhp7b9vafavx2r8ny86mqya1k9"; depends=[broom devEMF dplyr flextable ggplot2 ggplotify gplots htmlwidgets magick magrittr officer plotly R_devices rvg tibble]; }; + eoffice = derive2 { name="eoffice"; version="0.1.9"; sha256="019z09jml67ymc2y8y853nflcsvibkligvnngar8f9qv3k2j5k7j"; depends=[broom devEMF dplyr flextable ggplot2 ggplotify htmlwidgets magick magrittr officer plotly R_devices rvg]; }; epade = derive2 { name="epade"; version="0.3.8"; sha256="1alvsifc6i71ilm1xxs1d7sqlapb48bqd6z2n4wi6pqcjvwp7bif"; depends=[plotrix]; }; epandist = derive2 { name="epandist"; version="1.1.1"; sha256="0hxgbjns5bk82rgcmykxifnnxcnqdzmkimkkmpdif64zr5g3gjdg"; depends=[]; }; epanetReader = derive2 { name="epanetReader"; version="0.7.3"; sha256="05pwa6z03qsjwr9pxpbxycsd21p7mf5j5ajyg4yaas5g100s1k8c"; depends=[]; }; - eph = derive2 { name="eph"; version="0.2.0"; sha256="0j41hmiw59q9mwzsw94s0m0hrh4fqhbmayqbblfizh7gr7wijz53"; depends=[assertthat attempt curl dplyr expss glue janitor magrittr purrr questionr readr readxl stringr tibble tidyr tidyverse zoo]; }; + eph = derive2 { name="eph"; version="0.3.0"; sha256="19v892mryggsvr4w8sbxr8zpwfm94hs52am4r8gc7wxrdid2h3c0"; depends=[assertthat attempt curl dplyr expss glue htmltools janitor leaflet magrittr purrr questionr readr readxl rlang rvest sf stringr tibble tidyr tidyverse xml2 zoo]; }; epiDisplay = derive2 { name="epiDisplay"; version="3.5.0.1"; sha256="08ym6hcbmajzr4rasdb35fxk79vgpzfc16rmcm34f7f3zzz09dyl"; depends=[foreign MASS nnet survival]; }; epiGWAS = derive2 { name="epiGWAS"; version="1.0.2"; sha256="0jqblfmz02za3b2pgi15379bzgh98yv5kyv8kh0lkzhrmpgph2zj"; depends=[DescTools glmnet matrixStats SNPknock]; }; - epiR = derive2 { name="epiR"; version="1.0-11"; sha256="1f9v22g7pfsywq44pck436x0dxp6nxicl3jv0d5bbppzjyf1ghp7"; depends=[BiasedUrn survival]; }; + epiR = derive2 { name="epiR"; version="1.0-14"; sha256="134jswcln8y7fwphn8x926wxvb6ax848jcwnhfa8jzs6jw0f1csi"; depends=[BiasedUrn survival]; }; epibasix = derive2 { name="epibasix"; version="1.5"; sha256="0ivr51x37cbdryli9b4p4iq9v2c90zwmywrwdmg7ryq5vprvvbp0"; depends=[]; }; epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; }; epidata = derive2 { name="epidata"; version="0.3.0"; sha256="1b00k086wiwhhrlh4348wqqza1v0whakwy5h7q95rmgxz7lppiim"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; }; epiflows = derive2 { name="epiflows"; version="0.2.0"; sha256="09ri1p73ih0i08irc06ff169hi5vcl8bdi63b056kzxgmv17yqkp"; depends=[epicontacts geosphere ggmap ggplot2 htmltools htmlwidgets leaflet sp tibble visNetwork]; }; + epikit = derive2 { name="epikit"; version="0.1.0"; sha256="0whb36y8z5apyiywd2bhqnay3qr6b8h5rqp8mxkksrhifibjjx4w"; depends=[binom dplyr forcats glue rlang scales tibble tidyr tidyselect]; }; epimdr = derive2 { name="epimdr"; version="0.6-5"; sha256="1nxdlz7gl9vrha9iw92y0s9dmm101gkz0rsqxqg1rdxanr6hs6sh"; depends=[deSolve polspline shiny]; }; epinet = derive2 { name="epinet"; version="2.1.8"; sha256="10bgq66n99kkz0nhmsz508aypxk57zk19p5l3xrb28n72k4rfgrf"; depends=[network]; }; epiphy = derive2 { name="epiphy"; version="0.3.4"; sha256="04wsppjycnrzrml3zxrpr0xdxxas3hj8rskiivx5vfmfjpwipq4r"; depends=[ggplot2 msm pbapply Rcpp transport]; }; episcan = derive2 { name="episcan"; version="0.0.1"; sha256="02687f8gpc2czn19lapvazd6mnm8902ay0lhgi3wdrzfhir42m4r"; depends=[]; }; - episensr = derive2 { name="episensr"; version="0.9.4"; sha256="1cjfmj9alf46mpfzx7jfh6yrn7i4ldpnks28zxk42ln1zhb6jh6f"; depends=[actuar boot ggplot2 gridExtra magrittr plyr reshape trapezoid triangle]; }; + episensr = derive2 { name="episensr"; version="0.9.6"; sha256="193abdngrvxriv1dxjv0panf0whczli637xfs2fr05p588lljpr6"; depends=[actuar boot ggplot2 gridExtra magrittr plyr reshape trapezoid triangle]; }; episheet = derive2 { name="episheet"; version="0.4.0"; sha256="0y3wy91hr3b9iky5k81mf897wg2gcdv05afhndjqwcfb0xkn2f9q"; depends=[assertthat dplyr ggplot2 magrittr rlang tidyr]; }; episplineDensity = derive2 { name="episplineDensity"; version="0.0-1"; sha256="0nmh97xajnnh54i04yq8fdici4n5xvcbpdbjdbz79483gnils4vn"; depends=[nloptr pracma]; }; epistasis = derive2 { name="epistasis"; version="0.0.1-1"; sha256="0dfh26bs72i01hpxpgpgyiwpmg9mjpib8zynhc5ssxa0skm518wz"; depends=[glasso igraph Matrix tmvtnorm]; }; epitab = derive2 { name="epitab"; version="0.2.2"; sha256="0yi65bblsikwsa9i7wys1mqf6pp6j01kyc8xkyrhs5n62y1k68nc"; depends=[kableExtra knitr MASS survival xml2]; }; epitools = derive2 { name="epitools"; version="0.5-10"; sha256="1qqa2kam3j3mkbgk62g6lwygk2fkdlrpbi27wl37j4dkdkvx013m"; depends=[]; }; epitrix = derive2 { name="epitrix"; version="0.2.2"; sha256="1rqpvdky002h6mz636b77l4kd0im16pww62l6vnwh83si1m9pkki"; depends=[distcrete sodium stringi]; }; - eplusr = derive2 { name="eplusr"; version="0.11.0"; sha256="081qxdr2yhb3yyjgrxd94f11izlxv6x9s9ka1ms1wqhip8gkvssi"; depends=[callr cli crayon data_table lubridate processx progress R6 RSQLite stringi units]; }; + eplusr = derive2 { name="eplusr"; version="0.12.0"; sha256="1h8adyh1cjy3giqc3vj5gdx77h5fqfx44abw816k640h758lkjmp"; depends=[callr cli crayon data_table lubridate processx progress R6 RSQLite stringi units]; }; eply = derive2 { name="eply"; version="0.1.2"; sha256="0al44pvqf6ls3dh129vlv3g56hk1nbql09rj0qsb04d9kaz9anrp"; depends=[magrittr]; }; epoc = derive2 { name="epoc"; version="0.2.6-1.1"; sha256="1qlj4cl7mh5k52v2ippfs3cish5iadnix5w46p25hjqiriksclna"; depends=[elasticnet irr lassoshooting Matrix survival]; }; - epos = derive2 { name="epos"; version="0.1.0"; sha256="0b9r552hbrs281z7pxxw1hxgv9d15qmyzvgk5xsrgh8wivkh4lwp"; depends=[dplyr ggplot2 gridExtra hashmap stringr testthat tidyr TopKLists xtable]; }; epr = derive2 { name="epr"; version="3.0"; sha256="0czfz6qkcpa2qqs3pqii27hgpdvdzfrvxl0ip67v58hamq7kvjfv"; depends=[car lme4]; }; epsiwal = derive2 { name="epsiwal"; version="0.1.0"; sha256="0lmcmiqcc1pjj1d0zyn0hc23if1lkm85p6vcjqbddpnv9ags2mbh"; depends=[]; }; epubr = derive2 { name="epubr"; version="0.6.1"; sha256="0rp9q6hriilps5h6nc1226w5dvzws1g78pg3ldrq2r4dakpvsmjj"; depends=[dplyr magrittr tibble tidyr xml2 xslt]; }; epxToR = derive2 { name="epxToR"; version="0.4-0"; sha256="1vw9czdxp80jpvcc8bj5m4fshlavlawc1735m0s0d0x14z3giy6g"; depends=[httr XML]; }; - eq5d = derive2 { name="eq5d"; version="0.5.0"; sha256="0h5vrrl1kgq1kp1xli8safp6iig526ib0lz1hs067awkvxnka5yn"; depends=[]; }; + eq5d = derive2 { name="eq5d"; version="0.6.0"; sha256="1gafxk4vpcxy6v8x4pm8gl09kfn6ch79lxwkbhwz4hyjfblgzjhv"; depends=[]; }; eqn2svg = derive2 { name="eqn2svg"; version="0.1.0"; sha256="01hqmhjy62ic28jsx8zn0zg87pipxmd82795pj66661qkq306lb0"; depends=[htmltools magrittr]; }; eqs2lavaan = derive2 { name="eqs2lavaan"; version="3.0"; sha256="1lj6jwkfd84h9ldb6l74lrx2pnsl1c0d7mnrcrjkska87djb2nzd"; depends=[lavaan stringr]; }; eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; }; @@ -7366,20 +7380,20 @@ in with self; { erboost = derive2 { name="erboost"; version="1.3"; sha256="09hlpn6mqsmxfrrf7j3iy8ibb2lc4aw7rxy21g3pgqdmd9sbprim"; depends=[lattice]; }; ercv = derive2 { name="ercv"; version="1.0.1"; sha256="0rs4yhm9sjnqkrgqqy6b8wj9fgk910hxc8d7zi4qwql0v1gid27l"; depends=[]; }; erer = derive2 { name="erer"; version="2.5"; sha256="0wgzd7r63d20vghmbilqn1p5033i5p31asya1gzwlipgyfxmqp0b"; depends=[lmtest systemfit tseries urca]; }; - ergMargins = derive2 { name="ergMargins"; version="0.1.0"; sha256="0f65150ahlxx75k72f2shmlryq5qbszl9p0qxxpl87sfpclsaa0x"; depends=[btergm ergm Matrix network numDeriv statnet xergm_common]; }; ergm = derive2 { name="ergm"; version="3.10.4"; sha256="08hzhc06sfchbq8kq5yvs7gxz0v6nvx0qdb2g6ac38n54cd0npw8"; depends=[coda dplyr lpSolve MASS Matrix network purrr rlang robustbase statnet_common tibble trust]; }; ergm_count = derive2 { name="ergm.count"; version="3.4.0"; sha256="1bvbqckssqj91q56nz17mrvadk1i2mm301z9rj8qkh8116fwf93w"; depends=[ergm network statnet_common]; }; ergm_ego = derive2 { name="ergm.ego"; version="0.5"; sha256="1vvyfjvkddc1qr189wqbp8sbqmd317y71ml9jjjjns3znahriqv3"; depends=[coda ergm network purrr RColorBrewer rlang statnet_common tibble]; }; ergm_rank = derive2 { name="ergm.rank"; version="1.2.0"; sha256="1vc96rjsqvs6ybnzkpv12h0hsrx2s96k4hjilzjpjnhbazh5vynz"; depends=[ergm network statnet_common]; }; ergm_userterms = derive2 { name="ergm.userterms"; version="3.10.0"; sha256="1aqrgdayh73dkr71gf8vawlj6qgv66pxr4klxgqb6ffan66b5p8g"; depends=[ergm network statnet_common]; }; ergmharris = derive2 { name="ergmharris"; version="1.0"; sha256="1bfijhsljlykb94wi25lbpv35zkmgqpmgzmxcq98gjvzbn5j9pdq"; depends=[]; }; + ergmito = derive2 { name="ergmito"; version="0.2-1"; sha256="0g823winannv0i0v4b1mdsivcgrmr1y7nr3iia4si7gvx3r07fgk"; depends=[ergm MASS network Rcpp RcppArmadillo texreg]; }; erp_easy = derive2 { name="erp.easy"; version="1.1.0"; sha256="193n45w0rq3cy0nmxvv0h6s3yr8kfjlg90nd4dnqlsq85zlsizij"; depends=[gtools plyr signal]; }; erpR = derive2 { name="erpR"; version="0.2.0"; sha256="1y6abc5fkcyyjh36maj1zbxppqzwd5wkvzvqahyvzsz5fqpjkcdx"; depends=[rpanel]; }; err = derive2 { name="err"; version="0.2.0"; sha256="1915b0vmqdd8whwdrqjphld1jaxawh5b7di6wf7q3sx779lblsrs"; depends=[]; }; errint = derive2 { name="errint"; version="1.0"; sha256="1ya7fsvwhmgxw87r32m4345n8pw2pbpv026xvml03s1kiam8qwbw"; depends=[rootSolve VGAM]; }; - errorist = derive2 { name="errorist"; version="0.0.2"; sha256="061v8z11sgzbhzcnyixfv9ff0vhiszjh0dy1rvzbyjsvjzmdimq0"; depends=[searcher]; }; + errorist = derive2 { name="errorist"; version="0.1.0"; sha256="0zq5h2wffn9d3f3blzh736478k91smlvz5hxy55hcjqffpxcp4ah"; depends=[searcher]; }; errorizer = derive2 { name="errorizer"; version="0.2.1"; sha256="10p7ydm81x2gls0wn692llgj2rxhg4s96rv7gvihmgi5dflraypq"; depends=[]; }; - errorlocate = derive2 { name="errorlocate"; version="0.2.0"; sha256="0lm0fp7b4ggx744b7kymman813rqw18qr7pd8r3j52spy3kq90lk"; depends=[lpSolveAPI validate]; }; + errorlocate = derive2 { name="errorlocate"; version="0.3.0"; sha256="04vr2ll3mdy1znm11lv739drckv82n45qbpda3qyjyzlffvgkmhg"; depends=[lpSolveAPI validate]; }; errors = derive2 { name="errors"; version="0.3.3"; sha256="037spyvw4rm2fcsq7a53svljlsgssrzrshyq01fnky0kq3z0iqqm"; depends=[]; }; es_dif = derive2 { name="es.dif"; version="1.0.1"; sha256="0cpncj68dhqfcpw7fjqc23d84rq767hqpw6la6iszfrrc27bx4lw"; depends=[]; }; esDesign = derive2 { name="esDesign"; version="1.0.2"; sha256="16dhddw4gp210bb1mmx5df1ziffadiz06s4i3znnzac8rv5564hp"; depends=[]; }; @@ -7387,11 +7401,12 @@ in with self; { esaddle = derive2 { name="esaddle"; version="0.0.6"; sha256="0i89yid4zryc95aj8n512wj3cs5nx351w4rc1nghq5a7vp139fa7"; depends=[doParallel mvnfast plyr Rcpp RcppArmadillo]; }; esaps = derive2 { name="esaps"; version="0.1.0"; sha256="1rchs4i7n221gyhj9kbka4zmi2lf72q3ak2pdxkr7w6pcx6803yz"; depends=[plyr readODS readxl]; }; esc = derive2 { name="esc"; version="0.5.1"; sha256="0gns7gz55p6pha05413r3hlvd7f2v1amxkg13d197mab1ypqic7q"; depends=[]; }; + escalation = derive2 { name="escalation"; version="0.1.1"; sha256="16dw8c6cjmzazchwxyh5x2gqpbiaqwrfbjiv7bp5b06kazy106s1"; depends=[BOIN dfcrm dplyr gtools magrittr purrr stringr tibble tidyr tidyselect]; }; eseis = derive2 { name="eseis"; version="0.5.0"; sha256="03pjcms3aj7sm2wrld64v1dw53bqn9pmsayndma03abjh66rblii"; depends=[caTools fftw IRISSeismic matrixStats multitaper raster Rcpp reticulate rgdal rmarkdown shiny signal sp XML]; }; eshrink = derive2 { name="eshrink"; version="0.1.0"; sha256="0s1jl652za7qwv70kmc1h3vbwlijl49527pwpm0z347lz2jdcigj"; depends=[glmnet MASS]; }; esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; }; esmprep = derive2 { name="esmprep"; version="0.2.0"; sha256="076sm26mkkvig2g04k32z2dlp2h9gnqgzckhirl4pqm01siknl61"; depends=[lubridate]; }; - esquisse = derive2 { name="esquisse"; version="0.2.3"; sha256="0xx9d4xhcbbjc5nzwq0azhilkkn2q0q3xl1nbidj10c9f3ma699j"; depends=[ggplot2 ggthemes hrbrthemes htmltools jsonlite miniUI rlang rstudioapi scales shiny shinyWidgets stringi]; }; + esquisse = derive2 { name="esquisse"; version="0.3.0"; sha256="1cb30qmsxpkx62rjaasly13l00bvz03i9jq5apsr4fk26vw7gfrk"; depends=[ggplot2 htmltools jsonlite miniUI rlang rstudioapi scales shiny shinyWidgets stringi]; }; esreg = derive2 { name="esreg"; version="0.5.0"; sha256="1njwqm3hrcxwl6y7gwa4zq0q5139293qk503ahw23dxwzdsiy2z5"; depends=[Formula quantreg Rcpp RcppArmadillo]; }; essHist = derive2 { name="essHist"; version="1.2.2"; sha256="0rvlxfcl42h4pjqf37mx7bc4k21iwvnys6l5rf2jsl7yk1b9hmbn"; depends=[Rcpp]; }; essurvey = derive2 { name="essurvey"; version="1.0.5"; sha256="078bm5knrhij4rdv7hqv5ci0dfdci7lw4yrqbikp8miapivv88vp"; depends=[haven httr rvest tibble xml2]; }; @@ -7402,23 +7417,23 @@ in with self; { estout = derive2 { name="estout"; version="1.2"; sha256="0whrwlh4kzyip45s4zifj64mgsbnrllpvphs6i5csb7hi3mdb3i5"; depends=[]; }; estprod = derive2 { name="estprod"; version="1.1"; sha256="15grcpyhaazd1sl8544gx4zpjqi9p17d6siyb6a1ykzzyy1v1fln"; depends=[boot Formula gmm lazyeval minpack_lm]; }; estudy2 = derive2 { name="estudy2"; version="0.9.1"; sha256="1hc90jcnbb69f8p5h2vv6qlnx2n1pzdpbk4xcqw6mi7472dsmz7l"; depends=[matrixStats quantmod Rcpp zoo]; }; - esvis = derive2 { name="esvis"; version="0.2.0"; sha256="0l4c87l9n94q14hwky7d7i4h9c5zh8r04zlcz9w4mx7ixfd34zir"; depends=[sfsmisc]; }; + esvis = derive2 { name="esvis"; version="0.3.0"; sha256="0h64m3ay4q1l7rgz7vscpnh2x6gkxzzkqkam1hkfnvmxiy2a95f2"; depends=[dplyr ggplot2 Hmisc magrittr purrr rlang sfsmisc tibble tidyr]; }; etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; etasFLP = derive2 { name="etasFLP"; version="1.4.0"; sha256="04d526yajakzivlcsz8631p0j482cbbgfpdmzkc9zr1m4495xxif"; depends=[fields mapdata maps rgl]; }; ether = derive2 { name="ether"; version="0.1.6"; sha256="1f3phh5vdfvlxqrpzsn6ysz0q3mbhr862fzsd3sp8m8qhry86cbx"; depends=[dplyr httr jsonlite Rmpfr]; }; - ethnobotanyR = derive2 { name="ethnobotanyR"; version="0.1.6"; sha256="1v1vsj1nzmgji6kzgfkdmy08ajn8iag4jzw0lwh81b3vmdx8f4g2"; depends=[circlize cowplot dplyr ggplot2 magrittr reshape]; }; + ethnobotanyR = derive2 { name="ethnobotanyR"; version="0.1.7"; sha256="13xbiywrw6ixby9s1ipwb45p9c96d75vw906fpzy6axdv2c4pp70"; depends=[circlize cowplot dplyr ggplot2 ggridges magrittr reshape]; }; etl = derive2 { name="etl"; version="0.3.8"; sha256="19m1sp3ryqb1gw7i9lh8dpmwbgy0c0dpsivj27wkr36bdhfvrfls"; depends=[DBI downloader dplyr janitor lubridate readr rlang rvest stringr tibble usethis xml2]; }; - etm = derive2 { name="etm"; version="1.0.5"; sha256="1yivbq8y0ijcl1m4nir4q9hp4pi6iphwxgjprygsdf7vp98wq677"; depends=[data_table lattice Rcpp RcppArmadillo survival]; }; + etm = derive2 { name="etm"; version="1.0.5.1"; sha256="0m41pm277sd50pharigcqzr1a2g92wnmdf6fcab6fx16ia2fzrm7"; depends=[data_table lattice Rcpp RcppArmadillo survival]; }; etma = derive2 { name="etma"; version="1.1-1"; sha256="0g9244yx50y1gw0f37hskbcgyv4nldmzr86v3rmf3afabmjbyzjj"; depends=[]; }; etrunct = derive2 { name="etrunct"; version="0.1"; sha256="0ayazgyqlc8jcqr03cwfmfhm4pck6xri1r6vkgqy4arqkrrnrcqr"; depends=[]; }; - eudract = derive2 { name="eudract"; version="0.9.0"; sha256="0idxccm3cqb34gjypbh635rlqvjgcwbmywp1cv41mz2g56kbrcnb"; depends=[dplyr magrittr tidyr xml2 xslt]; }; + eudract = derive2 { name="eudract"; version="0.9.1"; sha256="1wxnc8c7xs71xm6i7darba733v6x3a5rwgp8zmm31iwh3cnnkpbq"; depends=[dplyr magrittr tidyr xml2 xslt]; }; eulerian = derive2 { name="eulerian"; version="1.0"; sha256="0yhpnx9vnfly14vn1c2z009m7yipv0j59j3s826vgpczax6b48m0"; depends=[graph]; }; - eulerr = derive2 { name="eulerr"; version="6.0.0"; sha256="0pvyg91xamhmz4k1b18g96imkddk64d6dadg74v1mnbzjiq742wh"; depends=[GenSA polyclip polylabelr Rcpp RcppArmadillo]; }; + eulerr = derive2 { name="eulerr"; version="6.1.0"; sha256="1r7y01vj293r1lhxk4anqqq6k2gnflzx2a2sfsyf7ccqmw95w0cj"; depends=[GenSA polyclip polylabelr Rcpp RcppArmadillo]; }; europepmc = derive2 { name="europepmc"; version="0.3"; sha256="1ngqs1sqzkbwv98dd5z4cxj8bnz41wyd0g060a2vpqi3s99s4i2h"; depends=[dplyr httr jsonlite plyr progress purrr urltools xml2]; }; europop = derive2 { name="europop"; version="0.3.1"; sha256="1ym257bxr4a0dmln1j8x3pf87wrryzgqyzhvk61whc6n2bj62x1s"; depends=[]; }; - eurostat = derive2 { name="eurostat"; version="3.5.2"; sha256="02xixnsz04ll2kidv6kmcpgf8681p6brf2vcxhr0p0qcl0ibvpcw"; depends=[broom classInt countrycode curl dplyr httr jsonlite lubridate RColorBrewer readr RefManageR sf sp stringi stringr tibble tidyr]; }; - ev_trawl = derive2 { name="ev.trawl"; version="0.1.0"; sha256="14yhnhqq1gz2rfy13v1dybnf55pyyimajbarxyp7gaqnd66nfq3p"; depends=[eva evir fExtremes ghyp hypergeo testthat]; }; - eva = derive2 { name="eva"; version="0.2.5"; sha256="03hyzbqi2mgdrmzrjnwzvy0ndf7ha5959b63sgd1g0b998fibbmd"; depends=[EnvStats Matrix]; }; + eurostat = derive2 { name="eurostat"; version="3.6.1"; sha256="1l2j9fdq33ivb3wns5bdr1dccaf494vwbyya3f2gz2g8mc2qpn0a"; depends=[broom classInt countrycode curl dplyr httr jsonlite lubridate RColorBrewer readr RefManageR sf sp stringi stringr tibble tidyr tidyselect]; }; + evabic = derive2 { name="evabic"; version="0.0.1"; sha256="196gmq8v8a45zkk4qqr3hzbrrxnmwryb0q81bqcdap5zf4w7153x"; depends=[]; }; + evalITR = derive2 { name="evalITR"; version="0.1.0"; sha256="05nqcy9x3f2ks9xvzd3cd000q2kybdycgrlvz5pv7ipw1dlysgg2"; depends=[]; }; evaluate = derive2 { name="evaluate"; version="0.14"; sha256="0a2y7j534gbgixkwj9r1z76l2vssw4g1hznzbpclc076wkdqpj58"; depends=[]; }; evaluator = derive2 { name="evaluator"; version="0.4.1"; sha256="1h1s2n09i6r9w17lr8ry9acg6kfsmf3c4w45jdwvz1pmy1ss8whi"; depends=[cli crayon dplyr extrafont ggplot2 magrittr mc2d purrr readr readxl rlang rstudioapi scales stringi tibble tidyr vctrs viridis]; }; evclass = derive2 { name="evclass"; version="1.1.1"; sha256="00lbhcgswpv0amz0mb93kx9p91sf0d7zvxfw9i8x1zpmpfd6nhcj"; depends=[FNN]; }; @@ -7430,13 +7445,14 @@ in with self; { eventdataR = derive2 { name="eventdataR"; version="0.2.0"; sha256="11apbbj68x1kxpwvihf4ng7wxy54jl1aw7r9hyq6gn7h8sk6lpjn"; depends=[]; }; events = derive2 { name="events"; version="0.5"; sha256="1zka4ygymifs8snd7cabl11b5lg3f8g8370dkm9ybl40bn8vvqq2"; depends=[]; }; eventstream = derive2 { name="eventstream"; version="0.1.0"; sha256="0imrs872b6fjvw74smniiiicvizyign6wmwwybljk704cshzcy2f"; depends=[abind AtmRay changepoint dbscan glmnet MASS tensorA]; }; + evgam = derive2 { name="evgam"; version="0.1.1"; sha256="0hhhbawmaywv3fb2qclngdsa4bdmrrl1kgy297hdhmlg9nqzanp6"; depends=[mgcv Rcpp RcppArmadillo]; }; evian = derive2 { name="evian"; version="2.1.0"; sha256="1slnzq55gg3p16fs22v69mafiggiy5f70sj8fh65lc0hphybh6w2"; depends=[doParallel foreach ProfileLikelihood sandwich]; }; evidence = derive2 { name="evidence"; version="0.8.10"; sha256="02kqk95kx4nv13fg6z55a5rv6sq6lv8azg0jjxbkg1j6hg15p7ai"; depends=[LaplacesDemon lattice LearnBayes loo rstan rstanarm]; }; - evidenceFactors = derive2 { name="evidenceFactors"; version="1.00"; sha256="12wndimbygn7h57f3q0xmxmvqrcdj98f0a58m22z2l0vmym53rhb"; depends=[sensitivitymv]; }; + evidenceFactors = derive2 { name="evidenceFactors"; version="1.8"; sha256="0g9w1q8ir6qmvk5vvbpipiyias7nj74ks2h94ja7al8sz68gralx"; depends=[sensitivitymv]; }; evir = derive2 { name="evir"; version="1.7-4"; sha256="1h7a7z7v5k33y5hsdfczsri3vpbwspfgazhv4saknv2h11rgfpki"; depends=[]; }; evmix = derive2 { name="evmix"; version="2.12"; sha256="02rabc9snci00s1x7h0svfr66lmw1wjcdg0149wc52mnccsdaivf"; depends=[gsl MASS SparseM]; }; evobiR = derive2 { name="evobiR"; version="1.1"; sha256="0502xj1gv2g943vfqyllz4sr5z4mixf5vqlqi2v96mymnv9iwsr8"; depends=[ape geiger phytools seqinr shiny]; }; - evolqg = derive2 { name="evolqg"; version="0.2-6"; sha256="1jc6mndlmd0y8wxcqqrlyk211i4ay3yna9clm0p1cnxy4cbn8lq5"; depends=[ape coda expm ggplot2 igraph Matrix matrixcalc MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; }; + evolqg = derive2 { name="evolqg"; version="0.2-7"; sha256="1ib39whfx1hpjgy8g9pfcix1ki7w6bf2ka8z15avcmj32jl8ns6f"; depends=[ape coda expm ggplot2 igraph Matrix matrixcalc MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; }; evolvability = derive2 { name="evolvability"; version="1.1.0"; sha256="0lbyidb86yzvcfw86jfwnzbpijn64jr8fasycqq4h3r9c0x2by3j"; depends=[coda]; }; evoper = derive2 { name="evoper"; version="0.5.0"; sha256="064fcpd04ws8v6sl0bakiw34jmmfpg1w5pkq94y2gh1c576x4vwz"; depends=[boot data_table deSolve futile_logger ggplot2 plot3D plyr reshape RNetLogo rrepast]; }; evt0 = derive2 { name="evt0"; version="1.1-3"; sha256="08sbyvx49kp3jsyki60gbbnci26d6yk0yj2zcl4bhfac8c3mm6ya"; depends=[evd]; }; @@ -7449,14 +7465,14 @@ in with self; { exactLoglinTest = derive2 { name="exactLoglinTest"; version="1.4.2"; sha256="0j146ih9szzks9r45vq1jf47hrwjq081q1nsja5h1gpllks8217h"; depends=[]; }; exactRankTests = derive2 { name="exactRankTests"; version="0.8-31"; sha256="1154dkcid3njhamdp87qs9bnx7l8bdqkcjsds9q9f2xmizs9x8gw"; depends=[]; }; exactci = derive2 { name="exactci"; version="1.3-3"; sha256="03r35f6dyrck5pf43ypb1sjwfnvkhjkm1mbms3wh67ayfs2ypn0s"; depends=[ssanv]; }; - exactextractr = derive2 { name="exactextractr"; version="0.1.2"; sha256="18f01431cs4dziq3x77pni7axvmnh2hnvs97jh9sbanjdx6iqvj2"; depends=[raster Rcpp sf]; }; + exactextractr = derive2 { name="exactextractr"; version="0.2.0"; sha256="194bqn9gwaiq3s6c5kvcvcl6nv8fnflxi1f3f87ws83pcvy7aasn"; depends=[raster Rcpp sf]; }; exactmeta = derive2 { name="exactmeta"; version="1.0-2"; sha256="1v807ns799qajffky4k18iah0s3qh2ava6sz5i85hwx9dhkz19h4"; depends=[]; }; exampletestr = derive2 { name="exampletestr"; version="1.5.2"; sha256="0lfhgjirsl2b1vksjfrw3wlvw6x34d20vldh313qkjrg2yihpk1q"; depends=[checkmate filesstrings fs glue magrittr ore purrr readr rlang roxygen2 stringr styler usethis withr]; }; exams = derive2 { name="exams"; version="2.3-4"; sha256="1sa76qnzf7llj97xc41l2s8n4fqlg1wcvyq9sq59f1blfwxcnnd7"; depends=[]; }; exceedProb = derive2 { name="exceedProb"; version="0.0.1"; sha256="02pb8b0rxygbv6501rcr2hb0bhz1r78k5znav161kk25fb9bxs5v"; depends=[BH Rcpp]; }; - excelR = derive2 { name="excelR"; version="0.3.1"; sha256="15frhi1laiwbd2izfm91ilvzcyl97svmx6slca5j2c6v5db3vzmq"; depends=[htmlwidgets jsonlite]; }; + excelR = derive2 { name="excelR"; version="0.4.0"; sha256="1pb4sy54zjv5vrh7gjjv7qlpab74km6mfsmfyl0yhmr0jx01hrw0"; depends=[htmlwidgets jsonlite]; }; excerptr = derive2 { name="excerptr"; version="2.0.0"; sha256="1xglpg9i45dd103ahj46lin42x9c8lgff2b5c4k3799gaki9sjzz"; depends=[checkmate reticulate]; }; - excursions = derive2 { name="excursions"; version="2.4.4"; sha256="140p0vks40vsj1bi89rhdqih5jh7795pxzzqm9140vfiv8b0aya5"; depends=[Matrix sp]; }; + excursions = derive2 { name="excursions"; version="2.4.5"; sha256="13as2zwwa1fbbcrdda10v1lbkkj9mazyhrzckndfbvpnskm10wb6"; depends=[Matrix sp]; }; exdex = derive2 { name="exdex"; version="1.0.1"; sha256="15wdi24fq8q4ja4527k1adv6lkzyhylp8nwlsrb91q0sbmmprrqs"; depends=[chandwich Rcpp RcppArmadillo RcppRoll]; }; exif = derive2 { name="exif"; version="0.1.0"; sha256="12phqn5x1x0xs2xczl3064q983dalm261vqpyafhdcndm1y3gwbc"; depends=[Rcpp]; }; exifr = derive2 { name="exifr"; version="0.3.1"; sha256="0394f04wq5dnqbnbaq7gxv4ggis4kf3b8dhhjzlybsbip6nmv54x"; depends=[curl jsonlite plyr rappdirs tibble]; }; @@ -7469,10 +7485,9 @@ in with self; { expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; }; expint = derive2 { name="expint"; version="0.1-6"; sha256="0iai25cglcdnf44d2d1fz1xpw4q600my4zq4493fk4cs5673mlf7"; depends=[]; }; explor = derive2 { name="explor"; version="0.3.5"; sha256="1v3z067w5kskwr0wmrr26m3yfsmg9pf17ma9ck2srgyxqmddc0sj"; depends=[dplyr DT formatR ggplot2 highr RColorBrewer scatterD3 shiny tidyr]; }; - explore = derive2 { name="explore"; version="0.5.3"; sha256="0fji8klf2wxrkyp1vdlcvj8i0b9c4c68qvsakbm45fnyz20q3v4a"; depends=[assertthat broom DBI dplyr DT forcats ggplot2 gridExtra magrittr MASS odbc rlang rmarkdown rpart rpart_plot shiny stringr tibble]; }; + explore = derive2 { name="explore"; version="0.5.4"; sha256="03cnwfyzls8cz687m6v01mzrrcarvmv8nmnwxr3hfg05y1gjy42w"; depends=[assertthat broom DBI dplyr DT forcats ggplot2 gridExtra magrittr MASS odbc rlang rmarkdown rpart rpart_plot shiny stringr tibble]; }; exploreR = derive2 { name="exploreR"; version="0.1"; sha256="154j5wiiy9vqdvh1qvdkz2fdp2phcygbbjl7nj5nkn07xwxbsc77"; depends=[ggplot2]; }; expm = derive2 { name="expm"; version="0.999-4"; sha256="15k0acg2aqb2ajhwal6l7vhhp03m4lg579805d34554cl0kn9l2q"; depends=[Matrix]; }; - export = derive2 { name="export"; version="0.2.2"; sha256="03i3jk4b9q1sak6m36p349bzqcwfq3bw6y8sgrw65475mrwipm4m"; depends=[broom flextable officer openxlsx rgl rvg stargazer xml2 xtable]; }; expose = derive2 { name="expose"; version="0.0.3"; sha256="0dlxlxm3g9d8vmgp13i1825z1jzah94ih1vyif46s43xq0nf9anj"; depends=[e1071 foreach gam ggplot2 glmnet Matrix nnet polspline RColorBrewer Rcpp repmis SuperLearner xgboost]; }; expp = derive2 { name="expp"; version="1.2.4"; sha256="00r5f80wnz91n0ksp1dvrxpd6zyfis2v3rizsnm7qqnnwj3d4q1c"; depends=[deldir rgeos sp spatstat spdep]; }; expperm = derive2 { name="expperm"; version="1.6"; sha256="0cybna0q3qn3slyc4lv5rby4pr0xkwq0h6n7hl1zhsaqv4c2zc5b"; depends=[Rcpp]; }; @@ -7495,7 +7510,7 @@ in with self; { extrafont = derive2 { name="extrafont"; version="0.17"; sha256="0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g"; depends=[extrafontdb Rttf2pt1]; }; extrafontdb = derive2 { name="extrafontdb"; version="1.0"; sha256="115n42hfvv5h4nn4cfkfmkmn968py4lpy8zd0d6w5yylwpzbm8gs"; depends=[]; }; extraoperators = derive2 { name="extraoperators"; version="0.1.1"; sha256="1clyp97ssmdq9ggbv3w5yskx7khnlm4ji7ym3k3b4bx1pazcw4q4"; depends=[]; }; - extremeIndex = derive2 { name="extremeIndex"; version="0.0.1"; sha256="0qyf7ban7cm9fnznbf78xffcfp5sc32s7kb3wn53mc5abgiad90b"; depends=[boot evd evir gmm goftest]; }; + extremeIndex = derive2 { name="extremeIndex"; version="0.0.2"; sha256="1zdw6ik2jh1fir01ay3ynw1l756ba05d5vqqcphnawvg0jkvhxvk"; depends=[boot evd evir gmm goftest]; }; extremeStat = derive2 { name="extremeStat"; version="1.4.0"; sha256="0fvkvlm47ri05w9h5qa937ijsc5lg51jc825wq9pmn7aiv58yxzm"; depends=[berryFunctions evd evir extRemes fExtremes ismev lmomco pbapply RColorBrewer Renext]; }; extremefit = derive2 { name="extremefit"; version="1.0.2"; sha256="07gx6dp0kz4y1jn90hsfvkhn6k7i4flh7ghdz9v5nwda86f55q2s"; depends=[]; }; extremevalues = derive2 { name="extremevalues"; version="2.3.2"; sha256="0pyngxljdnjwnbwcb0gmxcirv70r1s1wyq4m1wm5rprpdj8v9xil"; depends=[gWidgets gWidgetstcltk]; }; @@ -7519,38 +7534,37 @@ in with self; { fANCOVA = derive2 { name="fANCOVA"; version="0.5-1"; sha256="034m2mmm6wmsjd41sg82m9ppqjf4b1kgw5vl2w7kzqfx0lypaiwv"; depends=[]; }; fAsianOptions = derive2 { name="fAsianOptions"; version="3042.82"; sha256="13p1r93rgnf03wj0kkfpw4w4dlzd1ypkam50xqpjfm38qm4zvkds"; depends=[fBasics fOptions timeDate timeSeries]; }; fAssets = derive2 { name="fAssets"; version="3042.84"; sha256="0aj3gjd54ajviikwh075bympw7dx2dcsgj5p8j96vx2qbbwjmgvb"; depends=[ecodist energy fBasics fMultivar MASS mvnormtest robustbase sn timeDate timeSeries]; }; - fBasics = derive2 { name="fBasics"; version="3042.89"; sha256="0x6s6js52sz0rv3y66ax1bkf4mn9ihjmkyrm5clf7ymw5hvd5f5q"; depends=[gss MASS spatial stabledist timeDate timeSeries]; }; + fBasics = derive2 { name="fBasics"; version="3042.89.1"; sha256="1m8x1f9kvsbdcn3ys24hw0vgbxrzdrcp11ai0s3pilp7q91j095d"; depends=[gss MASS spatial stabledist timeDate timeSeries]; }; fBonds = derive2 { name="fBonds"; version="3042.78"; sha256="1yb5vyqj66m82xks5qi5cnsppylpprbk656z4lxzg30873hi8pcf"; depends=[fBasics timeDate timeSeries]; }; fCertificates = derive2 { name="fCertificates"; version="0.5-4"; sha256="1a49gkzvb83lqqw65lxlaszpicn663hwi9wrbsb3f6z7znylkzaf"; depends=[fBasics fExoticOptions fOptions]; }; - fChange = derive2 { name="fChange"; version="0.2.1"; sha256="1kg0rja62ds8ajazcajkh6jyc9qn3czd3fs2bhrbjcpav13ld51x"; depends=[fda lattice reshape2 sandwich sde]; }; - fCopulae = derive2 { name="fCopulae"; version="3042.82"; sha256="10wknqrrs5j63v7qnp5qmk85688r36vli4r99i49y2i2nv10yp5r"; depends=[fBasics fMultivar timeDate timeSeries]; }; + fCopulae = derive2 { name="fCopulae"; version="3042.82.1"; sha256="005ydbgyz7b1g3l2dn4r46113siyza9ag27f51r28md885dnbjpi"; depends=[fBasics fMultivar timeDate timeSeries]; }; fDMA = derive2 { name="fDMA"; version="2.2.4"; sha256="0lpp6gyynfziyn5ar3wlq628b5lvw5dhxzw6wr5xwwfaarqf7qfx"; depends=[doParallel foreach forecast gplots iterators itertools MSwM png psych Rcpp RcppArmadillo tseries xts zoo]; }; fExoticOptions = derive2 { name="fExoticOptions"; version="3042.80"; sha256="1b3y7j5ywic6xhsj2afq6y5f5l0npgav854rb87938rjckz95d4h"; depends=[fBasics fOptions timeDate timeSeries]; }; fExpressCertificates = derive2 { name="fExpressCertificates"; version="1.3"; sha256="0dcfwl0ib87p748hvwscm5ii9fhfarqfl3zqxa8kin2n0hrvkdb6"; depends=[fCertificates fExoticOptions fOptions Matrix mvtnorm tmvtnorm]; }; fExtremes = derive2 { name="fExtremes"; version="3042.82"; sha256="1n0afql4csgsqf7j9x2v8yxncvpknms643l9knm0fqb4pdbaw58c"; depends=[fBasics fGarch timeDate timeSeries]; }; - fGarch = derive2 { name="fGarch"; version="3042.83.1"; sha256="0cmdjw419iad0f7iv1wjznddiag6khp4k011hz85nr5hrzzj3c1d"; depends=[fastICA fBasics Matrix timeDate timeSeries]; }; + fGarch = derive2 { name="fGarch"; version="3042.83.2"; sha256="06c6f07bg05cbn7s40ak6ywyja4cfbznazj5my9rcyahjvc6b553"; depends=[fastICA fBasics Matrix timeDate timeSeries]; }; fICA = derive2 { name="fICA"; version="1.1-0"; sha256="0lfs31clax57qsrriq9wxjrjv2bckl7lf1csffzfwiqm6sp6mgxg"; depends=[JADE Rcpp RcppArmadillo]; }; fImport = derive2 { name="fImport"; version="3042.85"; sha256="0rm4mwhk5ial016vl6dny8s87gd5i9p04akdyg2fndpcqwfmb5lc"; depends=[timeDate timeSeries]; }; - fMultivar = derive2 { name="fMultivar"; version="3042.80"; sha256="0d9ijyjqqnzvy04ncx4vqd38gvgprrnzwiy5mn61wj9a4zsfgnbc"; depends=[cubature fBasics mvtnorm sn timeDate timeSeries]; }; + fMultivar = derive2 { name="fMultivar"; version="3042.80.1"; sha256="0v61sf9x54ymka9x15vz38afj1lxmgfpcwrr73lzhccf6ci6fx9m"; depends=[cubature fBasics mvtnorm sn timeDate timeSeries]; }; fNonlinear = derive2 { name="fNonlinear"; version="3042.79"; sha256="0kwjs7xx4ykw14mw3pff2axrq497jl4g23gbayswb8vrx1qhjibd"; depends=[fBasics timeDate timeSeries]; }; fOptions = derive2 { name="fOptions"; version="3042.86"; sha256="1cqyggb1hb7z0gfgkziynz7nm85z0fn3bvz1iwpy49yy8ll7rfzr"; depends=[fBasics timeDate timeSeries]; }; - fPortfolio = derive2 { name="fPortfolio"; version="3042.83"; sha256="05dprxn0h2cd13m84rb1s5n8nr9m4v4dslqmm99481rp66kgc004"; depends=[fAssets fBasics fCopulae kernlab MASS quadprog Rglpk rneos robustbase Rsolnp slam timeDate timeSeries]; }; + fPortfolio = derive2 { name="fPortfolio"; version="3042.83.1"; sha256="1knyrjgfzwf4ppvnb5n325p5f6sidr6q53ss0zw8binhj22gli4y"; depends=[fAssets fBasics fCopulae kernlab MASS quadprog Rglpk rneos robustbase Rsolnp slam timeDate timeSeries]; }; fRLR = derive2 { name="fRLR"; version="1.1"; sha256="005bmljxgvx8v87nz4l3ycg09sahyd34pg8arjz5gdc17d4mjjfc"; depends=[Rcpp]; }; fRegression = derive2 { name="fRegression"; version="3042.82"; sha256="0pi777xfk101g0r2qpcd0qxqqfnvck3sii990d946ljw6366mamc"; depends=[fBasics lmtest mgcv nnet polspline timeDate timeSeries]; }; fSRM = derive2 { name="fSRM"; version="0.6.4"; sha256="1n91gzjx9r3r3xl400w38miva0b69c0f23h2056kq9p1bax2nm86"; depends=[foreign ggplot2 gridExtra lavaan plyr reshape2 scales tcltk2]; }; fTrading = derive2 { name="fTrading"; version="3042.79"; sha256="0xnfg4npfdrvmp1n6vbsm7if16n5j83b7y1i2m5b34cqnlz9d69y"; depends=[fBasics timeDate timeSeries]; }; fUnitRoots = derive2 { name="fUnitRoots"; version="3042.79"; sha256="1hsv47dm0hx3s04g9h0bjdgi79zbfihnfxxdc2jskqp94yl7azsy"; depends=[fBasics timeDate timeSeries urca]; }; fabCI = derive2 { name="fabCI"; version="0.1"; sha256="123bc56nnx6hcj257imsd8sc6d0pggw08lf4m0lr90631gcm1mkn"; depends=[]; }; - fabMix = derive2 { name="fabMix"; version="4.6"; sha256="1xh3x9qbg61jgm80s2qrx43b55vmiam1i8mciijax8ipf56pk6j7"; depends=[coda corrplot doParallel foreach ggplot2 label_switching MASS mclust mvtnorm RColorBrewer Rcpp RcppArmadillo]; }; - fable = derive2 { name="fable"; version="0.1.1"; sha256="1h71slynwfsmv59yf7mm3gk3i56c5ggk3sd44fm83yhvv6080w3m"; depends=[dplyr fabletools Rcpp rlang tidyr tsibble]; }; - fabletools = derive2 { name="fabletools"; version="0.1.1"; sha256="0cbiqd7cx4kws9lhwydrjlcxcm46vl6srslzw1h5ljfmgjkvkf8p"; depends=[dplyr generics ggplot2 R6 rlang tibble tidyr tidyselect tsibble]; }; + fabMix = derive2 { name="fabMix"; version="5.0"; sha256="1gii3mdii9nw423xxn9mhv1pjbw967wdarn828w04zm9dkdcwm48"; depends=[coda corrplot doParallel foreach ggplot2 label_switching MASS mclust mvtnorm RColorBrewer Rcpp RcppArmadillo]; }; + fable = derive2 { name="fable"; version="0.1.2"; sha256="0v5nqxdjwvzanzzl0fcb04zlrah8irbz09grlhd04lz8mmj8n8ih"; depends=[dplyr fabletools Rcpp rlang tidyr tsibble]; }; + fabletools = derive2 { name="fabletools"; version="0.1.2"; sha256="0b5syqswaj4qzjcgd8a5hsrhdgh3n77c8p10xna4jv7ixdg7pc2f"; depends=[dplyr generics ggplot2 R6 rlang tibble tidyr tidyselect tsibble vctrs]; }; fabricatr = derive2 { name="fabricatr"; version="0.10.0"; sha256="0kh2mfgyqz3fpilc4wycxj3vihhbdnjzsjrsp88nmsk0p5mjmljj"; depends=[rlang]; }; face = derive2 { name="face"; version="0.1-5"; sha256="0n7vlq29krsdcp8r32irhvf7xbcxy5g7663qncmbhj5x45sviqh6"; depends=[Matrix matrixcalc mgcv]; }; - facebook_S4 = derive2 { name="facebook.S4"; version="1.1.0"; sha256="1if3fgyvj6pbf48yjwa5fkn3s4rl6kj9s1nk6dwphykhx72ghzrj"; depends=[httr magrittr plyr rjson]; }; facerec = derive2 { name="facerec"; version="0.1.0"; sha256="1dipcnxjz6yd34w0jrrvj5p0pwdgz1l5m9zvri7mflnz7g34gmaj"; depends=[dplyr httr jsonlite knitr magrittr rlang snakecase stringr]; }; facilitation = derive2 { name="facilitation"; version="0.5.2"; sha256="0gyqa3njyynvdhfziq33xqc7cjhszii67mk8809ncvh6abkdx1hw"; depends=[animation Matrix Rcpp]; }; factoextra = derive2 { name="factoextra"; version="1.0.6"; sha256="0bpsbcmp6jpa9qk53dhfzghrz98dh0h0n68brl7rjz724yjbvhn8"; depends=[abind cluster dendextend FactoMineR ggplot2 ggpubr ggrepel reshape2 tidyr]; }; factoptd = derive2 { name="factoptd"; version="1.0.3"; sha256="1ir50im3kr1xhqk4qwrm2h5fq9gqgrwshbamvjlf8n1wnn03mcb6"; depends=[MASS partitions]; }; + factor_switching = derive2 { name="factor.switching"; version="1.0"; sha256="14h8m73lmayvwgi2mnfggs2q1nr2apbsddr7m46ws22nyzz6q7am"; depends=[coda HDInterval lpSolve]; }; factorEx = derive2 { name="factorEx"; version="1.0.0"; sha256="12ykf42x5fqddlsvv3556sawfakribj0pwm5vfcg3y2y99a26qxg"; depends=[arm doParallel estimatr foreach genlasso igraph mvtnorm pbapply pbmcapply prodlim sandwich stringr]; }; factorMerger = derive2 { name="factorMerger"; version="0.4.0"; sha256="127k5h1gbbnjr6gxgck2n9glvvwkd69xq7n6gzmrq8gszk8v1x5m"; depends=[agricolae colorRamps dplyr forcats formula_tools ggplot2 ggpubr knitr magrittr MASS mvtnorm proxy reshape2 scales survival]; }; factorQR = derive2 { name="factorQR"; version="0.1-4"; sha256="1vl01fm5qfyhnqbl5y86vkr50b8cv07vzlqs3v6smqaqq6yp4lv4"; depends=[lattice]; }; @@ -7559,6 +7573,7 @@ in with self; { factorplot = derive2 { name="factorplot"; version="1.1-2"; sha256="025lfk122w66yxym3njcpzwnbhg40xi7p1c9vnxczcb8kz31745s"; depends=[multcomp nnet]; }; factorstochvol = derive2 { name="factorstochvol"; version="0.9.3"; sha256="15gamzznss9vfmbvbk61sgabxfsra2i49bs142jl1ahk7wchiskw"; depends=[corrplot GIGrvg Rcpp RcppArmadillo stochvol]; }; factory = derive2 { name="factory"; version="0.1.0"; sha256="1715bx2rn8kk5qd196jnrv5f95l54n4y0aqqdzfkgrmqihcy8ahx"; depends=[purrr rlang]; }; + factset_analyticsapi_engines = derive2 { name="factset.analyticsapi.engines"; version="3.0.1"; sha256="0v96z837dii1q7mbpd48zwpl2qjzqnhignb80g0xkc4iygsnrrms"; depends=[caTools httr jsonlite R6 rlang]; }; factset_protobuf_stach = derive2 { name="factset.protobuf.stach"; version="1.0.2"; sha256="0qdvgq0w58pb0bn4x5v25i8pvij3lc8l9x9bj68s9zb29ankl3ss"; depends=[R6 RProtoBuf]; }; factualR = derive2 { name="factualR"; version="0.5"; sha256="1wz8ibcmilcx62yy29nd2i1pdmjf7fm0g9i5s58gdn8cjlhnw1jl"; depends=[RCurl RJSONIO]; }; fad = derive2 { name="fad"; version="0.2-1"; sha256="09lbakil37fyji3bwydspzvrnwm0992x8783zyyv2jk37y0wr1ip"; depends=[Matrix Rcpp RSpectra]; }; @@ -7567,7 +7582,7 @@ in with self; { fairness = derive2 { name="fairness"; version="1.0.1"; sha256="1n17vrp0a3zii3444a2a7k33ffmyxmm15c8m7ln2fypya1z2pc5l"; depends=[caret devtools e1071 ggplot2 pROC]; }; faisalconjoint = derive2 { name="faisalconjoint"; version="1.15"; sha256="08sb4za8qyadvigq2z7b0r44qk2lpahpnz9nv16xfjb1zhdkz5w3"; depends=[]; }; fakeR = derive2 { name="fakeR"; version="1.0"; sha256="0f4ngnd8s34j1327zp3aqnsiw0gfxkp1i24ng20hrmfl13s1qmxp"; depends=[mvtnorm polycor pscl VGAM]; }; - fakemake = derive2 { name="fakemake"; version="1.6.0"; sha256="019dwh7n7k2djrpm0kik5qn7w3ifszppmpraqn4jyddn1jmllsn3"; depends=[callr igraph MakefileR withr]; }; + fakemake = derive2 { name="fakemake"; version="1.7.0"; sha256="09z0pxpyk13m9bkw8b39axznrpa3l3ifrhfs3256il6kkq6sm749"; depends=[callr igraph MakefileR withr]; }; falcon = derive2 { name="falcon"; version="0.2"; sha256="09hlvwwj3k3nhcsxijjvv8x74a9m200ayjjplrp4baxvczwyq341"; depends=[]; }; falconx = derive2 { name="falconx"; version="0.2"; sha256="0648mvbc7ga7vr2xqzyln3dgd11h5s4bqhv3p55mj7smr4qv7hv9"; depends=[]; }; fam_recrisk = derive2 { name="fam.recrisk"; version="0.1"; sha256="1lyrq7bq7p7ijc2vf545nazw4akncz08548ya1dv3lsc5jmkgfzj"; depends=[]; }; @@ -7587,7 +7602,7 @@ in with self; { fasstr = derive2 { name="fasstr"; version="0.3.1"; sha256="1msafxyx2xwgjw87yfbqqfn5ajfc6gla2nf41s6g4wjzg245n5zn"; depends=[dplyr e1071 fitdistrplus ggplot2 lubridate openxlsx PearsonDS plyr purrr RcppRoll scales tidyhydat tidyr zyp]; }; fast = derive2 { name="fast"; version="0.64"; sha256="098rk6kszdx3szcwvwzcv7zlcd6qvqvbqch7q8ilas6vbki81ba4"; depends=[zoo]; }; fastAdaboost = derive2 { name="fastAdaboost"; version="1.0.0"; sha256="1pv1y6znvc37pgwk99v4r0hljhipq8v6r3r5cb5vhgyl0bfi8g38"; depends=[Rcpp rpart]; }; - fastDummies = derive2 { name="fastDummies"; version="1.6.0"; sha256="0fkmc1kr11vf3pikj5is5951dx79705c7djfvg7bsbbvpvll0crj"; depends=[data_table tibble]; }; + fastDummies = derive2 { name="fastDummies"; version="1.6.1"; sha256="1vqpzrrahwabvpcfzzkgw98yxclsmjqrjzfa7jvd5dsz0bgil4r7"; depends=[data_table stringi tibble]; }; fastGHQuad = derive2 { name="fastGHQuad"; version="1.0"; sha256="1rjia8wggadr9xwxcmzmal0rc4g6pa3dr5888fbbnb6abl8b2lrj"; depends=[Rcpp]; }; fastGraph = derive2 { name="fastGraph"; version="2.1"; sha256="0lz199607hqpwxzhff4jzhmjq6cbakd335iyclmlscllgfzgnhql"; depends=[]; }; fastHICA = derive2 { name="fastHICA"; version="1.0.2"; sha256="1h794ybbii0k7v3x0r1499zxdqa1i1dpi3i7idzqdrffnb5kmwlv"; depends=[energy fastICA]; }; @@ -7595,8 +7610,7 @@ in with self; { fastJT = derive2 { name="fastJT"; version="1.0.5"; sha256="1knk4zjrkkv1i3a8n68vdrpxkwdkf19zw75p93hygfmbbz6r88v4"; depends=[Rcpp]; }; fastLink = derive2 { name="fastLink"; version="0.5.0"; sha256="1hgz4c26qlsdlp7gx0rsvkwn6xv86d7yk186sp7j6nfh2p9b1ccz"; depends=[adagio data_table doParallel dplyr FactoClass foreach gtools Matrix plotrix Rcpp RcppArmadillo RcppEigen stringdist stringi stringr]; }; fastM = derive2 { name="fastM"; version="0.0-4"; sha256="1n9a431w0hl4kr3pa32kcyd1d73acz4vb9vhfkckk3099mg46d9m"; depends=[Rcpp RcppArmadillo]; }; - fastNaiveBayes = derive2 { name="fastNaiveBayes"; version="2.1.0"; sha256="0gjhprbgrvc42nzz6ya6331cgrfqn08q3vwnd3s3fd4a2ig5xn2k"; depends=[Matrix]; }; - fastR = derive2 { name="fastR"; version="0.10.3"; sha256="1sz6krxiamq3rp4h9ah2b1zvyyrlvsn7lpvrjv1xda2c1kqqkvmk"; depends=[lattice mosaic mosaicCalc mosaicData]; }; + fastNaiveBayes = derive2 { name="fastNaiveBayes"; version="2.2.0"; sha256="11cxylh68wy8q6j979ba5awghmav57gnyzmssra4az6p4i4wvv9i"; depends=[Matrix]; }; fastR2 = derive2 { name="fastR2"; version="1.2.1"; sha256="15mqsdy79zvd4srrszdjp0kh9lfcq3yxp7j5d4xcqbjbwsgy68il"; depends=[dplyr ggplot2 lattice maxLik miscTools mosaic numDeriv]; }; fastSOM = derive2 { name="fastSOM"; version="1.0.1"; sha256="1fzy7lfx1fn9993h0qh6vbwq0w4gfgbdrprmzb1z3aqq6nqvmngm"; depends=[]; }; fastStat = derive2 { name="fastStat"; version="1.3"; sha256="1f4554p487l7cig2xihfbgl55x7w04xbazd01pic0l8819mgmy5n"; depends=[car do e1071 ggplot2 ggrepel plyr reshape2 set survival tseries]; }; @@ -7612,19 +7626,20 @@ in with self; { fasteraster = derive2 { name="fasteraster"; version="1.1.1"; sha256="1ycr2h046jds2758xvxn00rhglx3zarbzn3r38j66j5pnz2iiq4f"; depends=[Rcpp]; }; fasterize = derive2 { name="fasterize"; version="1.0.0"; sha256="0q8n1r5n06yr6vmnwrdajx8923646bzm7ywgn2f0zxl214plf56s"; depends=[raster Rcpp RcppArmadillo sp]; }; fastglm = derive2 { name="fastglm"; version="0.0.1"; sha256="1vqw02j4y28mngki87r42f1mhlkvajqp2gpbvk0l2adrkz70l0bn"; depends=[Rcpp RcppEigen]; }; - fastlogranktest = derive2 { name="fastlogranktest"; version="0.1.0"; sha256="0c0cv0a0y97grjywlcp71z6cnjgvaih4bnf2f332iq2lh6kb0j1x"; depends=[BH Rcpp]; }; + fastlogranktest = derive2 { name="fastlogranktest"; version="0.1.1"; sha256="0plvflhf5xcgw62hxp67ryy60sci69cbzm7klv786h2gz62v5qms"; depends=[BH Rcpp]; }; fastmaRching = derive2 { name="fastmaRching"; version="1.1.0"; sha256="085xr5i6h6vwl1flzbkwqsm8d815s0p02p0mir60jqjvy0s7haip"; depends=[raster rgdal sp]; }; fastmap = derive2 { name="fastmap"; version="1.0.1"; sha256="1v7sp56xiha0bh78g3w92k52p9vkp7ryzpw0z66nyddxzrfv0y27"; depends=[]; }; fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; }; fastmit = derive2 { name="fastmit"; version="0.1.1"; sha256="13hczsfbzssd272kpbq8l2l64lqrkmi2j6f3xyp9jvvxdd506kq0"; depends=[Rcpp RcppArmadillo]; }; fastnet = derive2 { name="fastnet"; version="0.1.6"; sha256="16jdwvk1xhl6bn9fx5s8pzvbizx6c0jmg6arqf201a7ghw2wi4xh"; depends=[doParallel foreach igraph tidygraph]; }; - fastpos = derive2 { name="fastpos"; version="0.2.0"; sha256="117b2hi1x9qh9q39sdwg9g69r70axivwyb8qs1jk2yrfh9fbrz2k"; depends=[MASS plyr Rcpp RcppArmadillo RcppProgress]; }; + fastpos = derive2 { name="fastpos"; version="0.3.0"; sha256="0w11pfbnh0px33i2myfdzi2xhskc61dan1yf2h8hvsr5x7y490lw"; depends=[MASS plyr Rcpp RcppArmadillo RcppProgress]; }; fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; fastqcr = derive2 { name="fastqcr"; version="0.1.2"; sha256="12x3lkg5zc4ckyg4x3xxqb779yhrr0fys7asf5b8shz49f86fmm9"; depends=[dplyr ggplot2 gridExtra magrittr readr rmarkdown rvest scales tibble tidyr xml2]; }; fastrtext = derive2 { name="fastrtext"; version="0.3.4"; sha256="0k38290pz92ysw57298nng7bbghf5cicvin7l9q6l89pk3qa5wp0"; depends=[assertthat Rcpp]; }; - fastshap = derive2 { name="fastshap"; version="0.0.4"; sha256="0ll1ak1ps24q2m8h71swszcm3p8qzj29gaaznihws3mvppkygc57"; depends=[abind ggplot2 gridExtra matrixStats plyr Rcpp RcppArmadillo tibble]; }; + fastshap = derive2 { name="fastshap"; version="0.0.5"; sha256="08f25ib5mry6h8lvj0g3clc9kfl5g2wdd8x8bw455wwmbcm6x5vg"; depends=[abind ggplot2 gridExtra matrixStats plyr Rcpp RcppArmadillo tibble]; }; fasttime = derive2 { name="fasttime"; version="1.0-2"; sha256="11i4c0zrkvvqsax0az1fvmc0jxfsjyx28434k1qgzhj9g2j9m9cf"; depends=[]; }; fat2Lpoly = derive2 { name="fat2Lpoly"; version="1.2.4"; sha256="01a9d6b2f6g858vg64kr0w0qmv2jqhk9kk3hb6jdr2rly4j8p14x"; depends=[kinship2 multgee]; }; + fauxnaif = derive2 { name="fauxnaif"; version="0.5.6"; sha256="1fgaj3rl2aqdf2x8z9lp8p5g7bfii98g4h2mmlhic4g135r7bznp"; depends=[glue magrittr rlang]; }; fauxpas = derive2 { name="fauxpas"; version="0.2.0"; sha256="0l77gxcf06p984z9vgaf1kag609h9qyrgav84lxkv97h6f3fflnc"; depends=[httpcode R6 whisker]; }; favnums = derive2 { name="favnums"; version="1.0.0"; sha256="0siax7gjr25lpf1li3hawx6nviggs68c0lap2d9i38azlhvj891w"; depends=[]; }; fbRads = derive2 { name="fbRads"; version="0.2"; sha256="1a65gfvizzm6psspcvlhkxligdf9j1whrgzkg7ww520lk3z8lnnd"; depends=[bit64 data_table digest futile_logger jsonlite plyr RCurl]; }; @@ -7641,55 +7656,54 @@ in with self; { fcros = derive2 { name="fcros"; version="1.6.1"; sha256="04yr6lqs38lczsmdvdm78qn63836qj7xwspgh3h3n3gh8cssd83x"; depends=[]; }; fcuk = derive2 { name="fcuk"; version="0.1.21"; sha256="1sb7p1m5qb88028mrw95lhh8l7dxj696hjh88nfsdpnscryknfpv"; depends=[magrittr purrr stringdist tibble]; }; fdANOVA = derive2 { name="fdANOVA"; version="0.1.2"; sha256="1pycq5a4czqzi8wcfmlc9ncg827j7n0qxyj90wcv39nbcrnl3da1"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; - fda = derive2 { name="fda"; version="2.4.8"; sha256="0n39rzbhg1hipzn51rzmbchn2358qgapg08iv7lmiqj5y7i9qns2"; depends=[Matrix]; }; - fda_usc = derive2 { name="fda.usc"; version="2.0.1"; sha256="0ii00vv4c4cvswd5vs82a1j7gbxl328bjxdk39r1xcd26iz94vlb"; depends=[doParallel fda foreach iterators MASS mgcv nlme]; }; + fda = derive2 { name="fda"; version="2.4.8.1"; sha256="0g50kj1dx7zarjv0lgwyzd2c7bv6di7nkndmywday5vjywgl8m7a"; depends=[Matrix]; }; + fda_usc = derive2 { name="fda.usc"; version="2.0.2"; sha256="0z44vkzjm2h6r5af0k1iic1szvw82rbwjrm541zlwn2jycj4q96a"; depends=[doParallel fda foreach iterators MASS mgcv nlme]; }; fdaACF = derive2 { name="fdaACF"; version="0.1.0"; sha256="19cnjs05cdln1jg568ybj1qsb8s848l8fzcw1p5i8rh92gm2x4w4"; depends=[CompQuadForm pracma]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.6"; sha256="0hyhb67qvvhyq68k5h4ffvsl4lmw66nfy5l14kwxnn42h3b810sc"; depends=[Formula Rcpp RcppArmadillo]; }; - fdaPDE = derive2 { name="fdaPDE"; version="1.0"; sha256="15x5n48hn151j9h8bnqjyjnaq575mckz6dcb9lxr9zmwidg58gb2"; depends=[geometry Matrix plot3D plot3Drgl RcppEigen rgl]; }; fdadensity = derive2 { name="fdadensity"; version="0.1.2"; sha256="1i2xzchlsixgjzyfmbv547sy6mq90xrnyc2kpd11wwfgfrpj1ix3"; depends=[fdapace Rcpp]; }; fdakma = derive2 { name="fdakma"; version="1.2.1"; sha256="0j9qgblrl7v4586dd6v0hjicli6jh8pkk5lzn8afpl75xfs24six"; depends=[]; }; - fdapace = derive2 { name="fdapace"; version="0.5.1"; sha256="0i9y9vz676jspanbbrfbygyq5bxplcv4c5q4yql1y0r8zkg4xq2z"; depends=[Hmisc MASS Matrix numDeriv pracma Rcpp RcppEigen]; }; - fdasrvf = derive2 { name="fdasrvf"; version="1.9.2"; sha256="0hdxpin1ydc9sl9wp5axn6sj2mwlhndxya92ss1i8lj1cxmlz42d"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo testthat tolerance viridisLite]; }; + fdapace = derive2 { name="fdapace"; version="0.5.2"; sha256="02kxd6604jnn0gg2bgpdalhhj390qyqk7zkzz2li5mgq8ym61n1p"; depends=[Hmisc MASS Matrix numDeriv pracma Rcpp RcppEigen]; }; + fdasrvf = derive2 { name="fdasrvf"; version="1.9.3"; sha256="148rkidnflrdjmid9p2m08qz0li21mibyr0ahqzhry14dcw24g01"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo testthat tolerance viridisLite]; }; fdatest = derive2 { name="fdatest"; version="2.1"; sha256="0zdnmssir5jz2kbfz4f4xshjfv4pivqx7cbh2arlx6ypkjrjws8n"; depends=[fda]; }; fdcov = derive2 { name="fdcov"; version="1.1.0"; sha256="0savsgcifcjjqrmbpn6m30gncq5iigqxpb19l710wlx8nm98svjh"; depends=[corrplot matlab]; }; fdistr = derive2 { name="fdistr"; version="0.1.0"; sha256="1i9nq4jmszbmwk4m6jfn7rifsn7aay40cj6kz23b9ihj3phqffi8"; depends=[dplyr ggplot2 magrittr usethis]; }; - fdm2id = derive2 { name="fdm2id"; version="0.9.1"; sha256="0dnjhrwwk5lqb2niqakp4fi7k8jgzdzaw62bbrqp3y409m49kcy9"; depends=[arules car caret class cluster e1071 FactoMineR flexclust fpc glmnet ibr irr kohonen leaps MASS mclust mda meanShiftR NMF nnet pls questionr randomForest ROCR rpart Rtsne SnowballC stopwords text2vec wordcloud xgboost]; }; + fdm2id = derive2 { name="fdm2id"; version="0.9.3"; sha256="0ylr8843hdilzj2c38csxw98pvib9pgw25j7kbgw8531931xqls0"; depends=[arules car caret class cluster e1071 FactoMineR flexclust fpc glmnet ibr irr kohonen leaps MASS mclust mda meanShiftR nnet pls questionr randomForest ROCR rpart Rtsne SnowballC stopwords text2vec wordcloud xgboost]; }; fdq = derive2 { name="fdq"; version="0.11"; sha256="1lzv1pmzjixp8wpap0w3lad1ns9z2hjbxkfpyp9jy9mxprj1w3q9"; depends=[data_table Fgmutils ggplot2 plyr randomcoloR sqldf]; }; fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.3"; sha256="17nzqy4i1c5kcqyps52827q5apyjn4znb1ql4qvfm8v2m1fvily3"; depends=[MCMCpack qvalue]; }; fdrci = derive2 { name="fdrci"; version="2.1"; sha256="1sgrsmlz7sbr1maw3qnpzqz3z75fh5nyiibpsq8j0y12xac8d0x3"; depends=[]; }; fdrtool = derive2 { name="fdrtool"; version="1.2.15"; sha256="1h46frlk7d9f4qx0bg6p55nrm9wwwz2sv6d1nz7061wdfsm69yb5"; depends=[]; }; fds = derive2 { name="fds"; version="1.8"; sha256="1284vncixrzrz9x6b52gslrbrbia07sd0xac7nwdqhp5f5v5wfi0"; depends=[rainbow RCurl]; }; fdth = derive2 { name="fdth"; version="1.2-1"; sha256="0rr9p2rns5ws111iqcicrlpcv47fkbxf161yxkkzfs2l3f1kgw14"; depends=[]; }; - feasts = derive2 { name="feasts"; version="0.1.2"; sha256="139ra1dgh6zy862gyr2w2agdrhplhh3rv7zv8k5vhi06sm59zggs"; depends=[dplyr fabletools ggplot2 lubridate rlang scales tibble tidyr tsibble]; }; + feasts = derive2 { name="feasts"; version="0.1.3"; sha256="16fzwgyhb99cxn6ynq3qxdzf0gyqjh9q7sa9ma5rr23cr460rsab"; depends=[dplyr fabletools ggplot2 lubridate rlang scales slider tibble tidyr tsibble vctrs]; }; feather = derive2 { name="feather"; version="0.3.5"; sha256="1gxd0h2m56sjjlzn4dry6s13nddxc4l5i11gsvavaf2dwbahdzsh"; depends=[hms Rcpp tibble]; }; feature = derive2 { name="feature"; version="1.2.13"; sha256="07hkw0bv38naj2hdsx4xxrm2dngi6w3rbvgr7s50bjic8hlgy1ra"; depends=[ks misc3d rgl]; }; featurefinder = derive2 { name="featurefinder"; version="1.1"; sha256="024g3adhxx1ynl9wnc2yl3illj4347ak6wkfmvqxfwd6llsa79ld"; depends=[plyr rpart rpart_plot]; }; features = derive2 { name="features"; version="2015.12-1"; sha256="0rd8r1dxzddb6718hcm8ck7531c9wdrjfy8n67875bbxgzcvds61"; depends=[lokern]; }; featuretoolsR = derive2 { name="featuretoolsR"; version="0.4.3"; sha256="1qgk9z8ld9yyw37r3birbds4a7jffq3qqkvlnldvz3yk81ir7kw7"; depends=[caret cli dplyr magrittr purrr reticulate stringr testthat tibble]; }; featurizer = derive2 { name="featurizer"; version="0.2"; sha256="05jvwsvpbdj94q3wl7ld6xmfc9p7ff9zsmryd3mmxz0hzbq2cnkc"; depends=[]; }; - febr = derive2 { name="febr"; version="1.0.3"; sha256="0rpk9k33ykcb8m475p420hpc1rj64i29dq8h0r9d49yl90ixhrn6"; depends=[dplyr glue googlesheets pedometrics readr sp stringr xlsx]; }; + febr = derive2 { name="febr"; version="1.1.0"; sha256="12580kbssixrgpr147vw52h88i0wvvpj44pp1n0ivxzmmzbvpqrv"; depends=[dplyr glue pedometrics sf stringr]; }; fechner = derive2 { name="fechner"; version="1.0-3"; sha256="0bassigcipwlr2g8cdjh8jyhmb903k3hla9gnigcbz7qwzlfwa86"; depends=[]; }; federalregister = derive2 { name="federalregister"; version="0.2.0"; sha256="0qr8nd3ylnwcv1wxspw5i7ray5sh30zr648spg0lpqq8dp2b8p7b"; depends=[curl httr jsonlite]; }; fedregs = derive2 { name="fedregs"; version="1.0.0"; sha256="171j6r6qxnx9gk9x9gpdyh51ssrgmf7sczc4889qr3qqw15sm4bn"; depends=[dplyr httr magrittr purrr rvest stringi tidyr tidytext xml2]; }; fedreporter = derive2 { name="fedreporter"; version="0.2.1"; sha256="18hs358iyxmbh28jy9f65zvanpr6bk4gq75qbj255y1zzdsjr9x1"; depends=[httr jsonlite]; }; feedeR = derive2 { name="feedeR"; version="0.0.7"; sha256="08mnfi96qkr1fj53ywqmya957swcwrfd3hqk0qaf2ni96sxxnp98"; depends=[digest dplyr lubridate RCurl XML]; }; feisr = derive2 { name="feisr"; version="1.0.1"; sha256="0pwaj509qz6z4rz54b10xmv2476qygmrm4bpc3szah6pf2pf0zmm"; depends=[aod Formula plm Rdpack]; }; + fellov = derive2 { name="fellov"; version="0.1"; sha256="0z4b08ykajzwa5852dknqz5qqlmhklbwdq8x5zhyfmwba5zfbjav"; depends=[]; }; felp = derive2 { name="felp"; version="0.2.2"; sha256="1kd2619cj8697l1zpigz78vshc5gd8yvrg7zmw3mik7pjafz1k32"; depends=[prettycode]; }; fence = derive2 { name="fence"; version="1.0"; sha256="18l3fliww60d9n9hbfdny5vr9mi78krwpjj5sypdsb77d6332h9q"; depends=[fields ggplot2 lme4 MASS sae snow snowfall]; }; fergm = derive2 { name="fergm"; version="1.1.4"; sha256="1d979z2m5f13i1w9d8kh9rnaafavsap169w0nycpd5j2f3dfhyn7"; depends=[ergm extrafont ggplot2 matrixStats network reshape2 rstan]; }; fermicatsR = derive2 { name="fermicatsR"; version="1.4"; sha256="1587f67fypj22rdi1319zq765lcc9z518bzl1jr4lz6c8lrzfm9i"; depends=[]; }; - fetchR = derive2 { name="fetchR"; version="2.1-1"; sha256="0i5k40i7ryfbk1l4nn0k5hnmzhhp6970ns1j82hnih7kmdl4rlwj"; depends=[plotKML rgdal rgeos sp]; }; ff = derive2 { name="ff"; version="2.2-14"; sha256="1w724q4jpzbvzpilb2ifviaxkjgk9lzwxz9gksnvicbmfa20fqqw"; depends=[bit]; }; - ffbase = derive2 { name="ffbase"; version="0.12.7"; sha256="04kxx2f3f0743c5nvpb7x1x0pcd220dazpd5ag1pidxbz3xa85nw"; depends=[bit fastmatch ff]; }; + ffbase = derive2 { name="ffbase"; version="0.12.8"; sha256="0mjk7dkq1ginqqfvngzny747ggf9a8fd7kblq96n5ys1jrwjyqhq"; depends=[bit fastmatch ff]; }; ffmanova = derive2 { name="ffmanova"; version="1.1.0"; sha256="0019m9vxnh5yxr5k7zflzyhd533a842cjjkcpqyannshnrbfndvy"; depends=[]; }; ffmetadata = derive2 { name="ffmetadata"; version="1.0.0"; sha256="0gjv5fl3p0kz28c91l4qf34a2685a24l5841ixdg7wivfs5v9npv"; depends=[httr jsonlite]; }; ffstream = derive2 { name="ffstream"; version="0.1.6"; sha256="036ikhah4y85khgfmvxwsn3vavvw1is8i9k2lw474wxlh4cxa3kd"; depends=[Rcpp]; }; - fftw = derive2 { name="fftw"; version="1.0-5"; sha256="037jnf0hgjlw4k2yj8kl9vi8h6vzsff261hn35f1kndywpl4zjdg"; depends=[]; }; + fftw = derive2 { name="fftw"; version="1.0-6"; sha256="1kkhn79x3akp2v28aqmif0dd2fn1pw145fjgyy29i4ab6pngazir"; depends=[]; }; fftwtools = derive2 { name="fftwtools"; version="0.9-8"; sha256="1nqvpzda281rxi1cmwajxxsn3sc3gz7scv8bvs5jm34kf36whha6"; depends=[]; }; fgac = derive2 { name="fgac"; version="0.6-1"; sha256="0paddf5a4w0g2i0ay7my0bppwh534d8ghy6csfxl5jj034xjgwkk"; depends=[]; }; fgdr = derive2 { name="fgdr"; version="1.0.0"; sha256="0wf0ayn2vx2pkid08ssr7ygq9k9qxsw86wwppm2r9b7i8cw7kbf8"; depends=[jpmesh magrittr purrr raster readr rlang sf sp stars stringr tibble xml2]; }; fgeo = derive2 { name="fgeo"; version="1.1.4"; sha256="0axglmk05li3plb79rccskhddjzq3pdx3mgxr8yqysymf1nscrq6"; depends=[cli crayon dplyr fgeo_analyze fgeo_plot fgeo_tool fgeo_x glue magrittr purrr rlang rstudioapi]; }; - fgeo_analyze = derive2 { name="fgeo.analyze"; version="1.1.11"; sha256="148ks0y8k29v5z69g04k2l1ncml18xcwgagi6mngj72b4h3cpc6p"; depends=[dplyr fgeo_tool glue lubridate magrittr MASS purrr rlang tibble tidyr withr]; }; + fgeo_analyze = derive2 { name="fgeo.analyze"; version="1.1.12"; sha256="0g8i4z9s6ydpk580fkjkshryhmm4cvlw2p9m8l17fnl7wa6s5i4a"; depends=[dplyr fgeo_tool glue lubridate magrittr MASS purrr rlang tibble tidyr withr]; }; fgeo_plot = derive2 { name="fgeo.plot"; version="1.1.9"; sha256="18zw4bsqdqdpy103kdyl40162mii6s1lp2w4cpi50svx7g7xhgh5"; depends=[dplyr fgeo_tool ggplot2 ggrepel glue magrittr purrr rlang stringr]; }; fgeo_tool = derive2 { name="fgeo.tool"; version="1.2.5"; sha256="1sy0w2n2727v44fv56zijj03q732q3qnxyn1r1j8spmb257bhvn6"; depends=[dplyr glue magrittr purrr readr rlang tibble tidyselect]; }; fgeo_x = derive2 { name="fgeo.x"; version="1.1.4"; sha256="0swps9rli74fmfb2j4kf55kw39gxz0q49m74ad4vcs0ylyp0sxrb"; depends=[memoise]; }; @@ -7700,8 +7714,7 @@ in with self; { fhidata = derive2 { name="fhidata"; version="2019.8.27"; sha256="0cm8ixpr3gjzprjcv43zdnysw8qhv72pf3fd2vckql01mlk16p42"; depends=[data_table]; }; fiberLD = derive2 { name="fiberLD"; version="0.1-6"; sha256="1i3bl2qsc77m81l11an9ihl4vy86s8jd5x6pasib77rl2877ad4x"; depends=[doParallel foreach Matrix VGAM]; }; fic = derive2 { name="fic"; version="1.0.0"; sha256="18xz94w1ab17jfi61bdg9z3pm63g488v17ns2ivizkza4gg07pv8"; depends=[abind ggplot2 mvtnorm numDeriv scales survival tensor]; }; - fieldRS = derive2 { name="fieldRS"; version="0.2.2"; sha256="0jrcdsv46zx7six9ll5sha32wx36wqajaladj6z8xym2n9ay8d5b"; depends=[caret concaveman ggplot2 raster rgeos sp spatialEco stringdist]; }; - fields = derive2 { name="fields"; version="10.0"; sha256="173zm5vr236ydiq0v27qy0l3x7h9fc7jly38iakg77j26i0a01il"; depends=[maps spam]; }; + fields = derive2 { name="fields"; version="10.3"; sha256="12k97vfjlz5h8vynirnvik1nyj1iw25n8xl7awmx9mpd6wvgy2s9"; depends=[maps spam]; }; fiery = derive2 { name="fiery"; version="1.1.2"; sha256="01ahdvcag8ifpp6jl6cgjjrchwxbr9fzvzqysj77kg3n5dcqm6cl"; depends=[assertthat crayon future glue httpuv later R6 reqres stringi uuid]; }; filehash = derive2 { name="filehash"; version="2.4-2"; sha256="14zv7h5195dmfksgk8qvjgc2qq8253vga6267aa1bqs5bpvmdl5n"; depends=[]; }; filehashSQLite = derive2 { name="filehashSQLite"; version="0.2-4"; sha256="1higvkmj4wvnwpvayqinzaygiksij20d77dx118q0gffsczadamh"; depends=[DBI filehash RSQLite]; }; @@ -7710,9 +7723,9 @@ in with self; { filenamer = derive2 { name="filenamer"; version="0.2.3"; sha256="19gavhh5q7dziv0yc000w06qp58wk2cm52cxjl33p1q4cjk6gg3m"; depends=[]; }; files = derive2 { name="files"; version="0.0.1"; sha256="1vhhawqjjbb6fadkn3l10mvz63w3vmcwvl93fk0q9mhkifzlj9kc"; depends=[]; }; filesstrings = derive2 { name="filesstrings"; version="3.1.5"; sha256="072alawp6j08mwlw1pz50g3lfi726kpsc744x5fvy71d7w4gqn6l"; depends=[checkmate magrittr matrixStats ore rlang strex stringi stringr tibble withr]; }; - filling = derive2 { name="filling"; version="0.2.0"; sha256="0yxixwgvn7jq09j4r3q33mmdda9a4anfi7y0xqscbdjz6p9bx48w"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; - fillr = derive2 { name="fillr"; version="0.1.1"; sha256="01z4841hxnpf8s9s327fqprb4gl9k8pkyv2mgc5vfl86r1pd7m1b"; depends=[]; }; - finalfit = derive2 { name="finalfit"; version="0.9.7"; sha256="1y1fllbrqy4q79w4l3830aqlf32v4clfzajqnwiylxwxw71v7yaa"; depends=[boot broom dplyr forcats GGally ggplot2 gridExtra Hmisc lme4 magrittr mice pillar plyr pROC purrr scales stringr survival survminer tibble tidyr]; }; + filling = derive2 { name="filling"; version="0.2.1"; sha256="17bhfzvzdyri8yx7b40yhdx3x2gb2vy2i8sz2cyjyw9idnd8svmr"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; + fillr = derive2 { name="fillr"; version="1.0.0"; sha256="1gx1ihp8j90ywmm6mmmfq4jd6apxawk9s5dfw3jq0wm1c290zqpv"; depends=[]; }; + finalfit = derive2 { name="finalfit"; version="1.0.0"; sha256="16bddxbj02yzlkvsn50r5qmqjbhlhpzi3q6mc8hp1afd1vydpmd3"; depends=[boot broom dplyr forcats GGally ggplot2 gridExtra lme4 magrittr mice pillar pROC purrr scales stringr survival tidyr]; }; finbif = derive2 { name="finbif"; version="0.2.0"; sha256="1wb4hl5j2g3fgapd7x8jl2180s48p51nngyb8zvs7jacl32a04bh"; depends=[digest httr jsonlite lubridate lutz]; }; finch = derive2 { name="finch"; version="0.3.0"; sha256="1cglyq3b0cvl05yrnpy6xn0nj0n817hgpcsxp3m07cvj8xidib02"; depends=[data_table digest EML hoardr plyr rappdirs xml2]; }; findR = derive2 { name="findR"; version="0.2.1"; sha256="1a7cf6kd7i2l4ffr2b17nb9xnpsjhf6fcwpjy06r0qgcapnfp54b"; depends=[pdftools stringr]; }; @@ -7720,7 +7733,7 @@ in with self; { findviews = derive2 { name="findviews"; version="0.1.3"; sha256="1l1yhw5hvrn0rpkdsch8m69d2q5284jwccvv7r4ia4m0iqjfipj7"; depends=[ggplot2 gridExtra scales shiny]; }; fingerPro = derive2 { name="fingerPro"; version="1.1"; sha256="1a1lj8gyrbgcg8hr03cj2bjzlaafddspri7abc83ys1raqwd4j68"; depends=[car GGally ggplot2 gridExtra klaR MASS plyr Rcmdr Rcpp RcppGSL RcppProgress reshape rgl scales]; }; fingerprint = derive2 { name="fingerprint"; version="3.5.7"; sha256="04jcwkydjrs31pia6kq8z2n9s54im950q08hs2ay15xjxxkmb8ic"; depends=[]; }; - fingertipsR = derive2 { name="fingertipsR"; version="1.0.0"; sha256="0hk2qlq7saqxlkd3yh4vq3s9cwcrjs65dwzhcglz5296w90dyscl"; depends=[curl dplyr DT httr jsonlite miniUI readr rlang shiny shinycssloaders]; }; + fingertipsR = derive2 { name="fingertipsR"; version="1.0.2"; sha256="15zhvdxp2l48b69hwq9bzafp94v405k5cw6824pi8kyslh95ibp8"; depends=[curl dplyr DT httr jsonlite miniUI readr rlang shiny shinycssloaders]; }; fingertipscharts = derive2 { name="fingertipscharts"; version="0.0.10"; sha256="1l3mirspz28djlzma04lkkynfbz8qfq0asr662q102j31qx6vnm4"; depends=[curl dplyr geojsonio ggplot2 httr leaflet lemon mapproj purrr rlang scales sf stringr tibble tidyr]; }; finiteruinprob = derive2 { name="finiteruinprob"; version="0.6"; sha256="0z4l0crymh58chxniqq70fqmvi6f5jkgvz72vbc7s3l9lrrapgr3"; depends=[numDeriv sdprisk]; }; finreportr = derive2 { name="finreportr"; version="1.0.1"; sha256="1mansiyl4p4zqc1h2aw9zgzb3fy4mppgmshdm8mcf4nbm340g4vk"; depends=[curl dplyr httr rvest XBRL xml2]; }; @@ -7751,7 +7764,7 @@ in with self; { fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.5.0"; sha256="00cc7kjs54wk2cxbkd14gldsrjmf4i35vwr6c2kfsassvjjhbmpm"; depends=[]; }; fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; }; fixerapi = derive2 { name="fixerapi"; version="0.1.6"; sha256="0ikf8dn0l9c9gshp4bph3wasl0bh6lfybinc8n1rvb202231hmgb"; depends=[jsonlite tibble tidyr]; }; - fixest = derive2 { name="fixest"; version="0.2.1"; sha256="1zs3jzrsg25hg8jrk1vc82xh5l07qc20109gvyv1m2arxs2ggnhs"; depends=[Formula MASS nlme numDeriv Rcpp]; }; + fixest = derive2 { name="fixest"; version="0.3.1"; sha256="1fbn4agbpy3vqmnmimw1p84kw5cvqpmwk178yakk19957kcwmbi1"; depends=[Formula MASS nlme numDeriv Rcpp]; }; fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; }; flacco = derive2 { name="flacco"; version="1.7"; sha256="1w77smmbrwglayr2rj88b00x7wan9f3x1fq8h6xyhybfvrw7vr0r"; depends=[BBmisc checkmate mlr]; }; flagr = derive2 { name="flagr"; version="0.3.2"; sha256="195c78cml2pjzfvpkaxbzcg1dfdqxi76138p0v3x3zzva9d8nlji"; depends=[]; }; @@ -7761,21 +7774,20 @@ in with self; { flare = derive2 { name="flare"; version="1.6.0.2"; sha256="1ybrsx1djqldw0l5l1iz4pfh6xxb8ckkg1ric7wnsr51wm9ljlh5"; depends=[igraph lattice MASS Matrix]; }; flars = derive2 { name="flars"; version="1.0"; sha256="06qma1ar1nj7n6g9alk1qydm5bkj6lsjx0pqkikxpb41d91civqk"; depends=[fda MASS Matrix Rcpp RcppEigen]; }; flashClust = derive2 { name="flashClust"; version="1.01-2"; sha256="0l4lpz451ll7f7lfxmb7ds24ppzhfg1c3ypvydglcc35p2dq99s8"; depends=[]; }; - flashlight = derive2 { name="flashlight"; version="0.6.0"; sha256="11ihz72kq77asg6lk2yfasxb99z4ixpddklvs26fglss58p24041"; depends=[dplyr ggplot2 ggpubr MetricsWeighted rlang tidyr]; }; + flashlight = derive2 { name="flashlight"; version="0.7.0"; sha256="0f7s5wajwhy69s817wzag820a9hqhjbjfb0sx23j0yc9k875n2ic"; depends=[dplyr ggplot2 ggpubr MetricsWeighted rlang rpart rpart_plot tidyr]; }; flatr = derive2 { name="flatr"; version="0.1.1"; sha256="10l98a3f57wahfpdqxj70r25zfhk4vzzd014pdnriy458yrfd7rw"; depends=[dplyr magrittr tibble]; }; flatxml = derive2 { name="flatxml"; version="0.0.2"; sha256="1f7pc3chzimkg23490qvppy63sk4ds3aaahc36sa4dc4qmhabyms"; depends=[RCurl xml2]; }; - flexPM = derive2 { name="flexPM"; version="2.0"; sha256="0h3qs9w9pc2nc24q1diz7j3s93y40ijpmgq2l0xg9mzcgjz9kz8c"; depends=[survival]; }; flexclust = derive2 { name="flexclust"; version="1.4-0"; sha256="0x7wxk8y46ndyz6fdacym0rd6p9wh3pcfr28chjcg5d7fm849zl2"; depends=[class lattice modeltools]; }; flexdashboard = derive2 { name="flexdashboard"; version="0.5.1.1"; sha256="0fy3nbrr67zqgd44r2mc850s5sp0hzfcw3zqs15m8kxzj1aw067x"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; }; flexmet = derive2 { name="flexmet"; version="1.0.0.0"; sha256="0xhr4i46s3k7a4yz2sd1sphn8wz27xcl580s2kqkr1ifg8941kv8"; depends=[]; }; flexmix = derive2 { name="flexmix"; version="2.3-15"; sha256="0hrz2axp2c9548b1r0bmrl57219nn030qndb83a8garkzq5lqi5s"; depends=[lattice modeltools nnet]; }; flexmixNL = derive2 { name="flexmixNL"; version="0.0.1"; sha256="0bk5v0cnsn1qkd1b86vj0bnpr4l9d6523kpkgzb1l1sqyscawfmm"; depends=[flexmix gnm]; }; - flexrsurv = derive2 { name="flexrsurv"; version="1.4.4"; sha256="08xhanbrd4pfm014ydh8dz6dpm6xw7qjdq0wr2flld04924yv9p8"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis statmod survival]; }; + flexrsurv = derive2 { name="flexrsurv"; version="1.4.5"; sha256="1xwh6fj854hr5j1mdh4cbp3hbrbdl4nb2ili876rq08wb9wq5pkf"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis statmod survival]; }; flexsurv = derive2 { name="flexsurv"; version="1.1.1"; sha256="0x7p1rv51pplfyyzcg63ssb8z56mig7y0363hkr0219w3cvyq9nr"; depends=[deSolve mstate muhaz mvtnorm quadprog Rcpp survival tibble tidyr]; }; flexsurvcure = derive2 { name="flexsurvcure"; version="1.0.0"; sha256="1blhwbkp0a3a7xnqyxp952wxkihdxb0xh68sk827h8rxis9zr4z4"; depends=[flexsurv gtools survival]; }; - flextable = derive2 { name="flextable"; version="0.5.6"; sha256="1f869f2dfqkzhf6yix7xcbs8rn1nwq3sg623h74zg6h1pl6px66w"; depends=[base64enc data_table gdtools htmltools knitr officer rlang rmarkdown xml2]; }; + flextable = derive2 { name="flextable"; version="0.5.9"; sha256="1rkz0nhwjy1l8sb0kmna5v492n2ydnk7gydswnmf88r8vfyjczhw"; depends=[base64enc data_table gdtools htmltools knitr officer rlang rmarkdown xml2]; }; flifo = derive2 { name="flifo"; version="0.1.5"; sha256="03x66l3ryrjvwbxxd0ncjrb5w9kc7fswmp5psb1cb7r87f395gm3"; depends=[bazar pryr]; }; - flightplanning = derive2 { name="flightplanning"; version="0.7.2"; sha256="0l7pm4sdjdr0n5njnh4lxydayr55p4i5w2a6i3b998z8fdl0vpv9"; depends=[rgdal rgeos sp]; }; + flightplanning = derive2 { name="flightplanning"; version="0.8.0"; sha256="0q5xdjgjj9j73djpvzc34ig2gk43xan5jg9pn195m1x8lz41yvk9"; depends=[rgdal rgeos sp]; }; flip = derive2 { name="flip"; version="2.5.0"; sha256="08x5hwxaxbgc745gblja7gcy0b5wbp7jf90lkha75zl5cc9iyksl"; depends=[cherry e1071 plyr someMTP]; }; flippant = derive2 { name="flippant"; version="1.1.0"; sha256="06aj90y7c33c1q0nw1c67vr1pfmp9fw78az6ivrbq110f2k1m12w"; depends=[assertive_files assertive_numbers assertive_properties assertive_strings assertive_types data_table ggplot2 magrittr minpack_lm plyr RcppRoll stringi withr wmtsa]; }; flipscores = derive2 { name="flipscores"; version="0.2"; sha256="0b55qxdrn6m0pbk4aj9zr1d9s7id6pclsaz939p48jmqx07zayjg"; depends=[]; }; @@ -7789,20 +7801,18 @@ in with self; { flowfield = derive2 { name="flowfield"; version="1.0"; sha256="1cx3i0w3xq781mmms4x20fshlf1i9bwxw9bxx562crix3fq3m50j"; depends=[]; }; flowr = derive2 { name="flowr"; version="0.9.10"; sha256="18mjshfg3827b26b8nz52pl04ph7n887vw0ym5fybjm8gy5wwpdg"; depends=[diagram params whisker]; }; flows = derive2 { name="flows"; version="1.1.1"; sha256="0l152p17plkrbnrlis8rfr9ij406agckdxvnjsciilv6qwcync29"; depends=[igraph reshape2 sp]; }; - flsa = derive2 { name="flsa"; version="1.5.1"; sha256="0x4fksps364841qckp218rfslx1dvwns1rhw2w7dcnhj7kfkcv59"; depends=[]; }; + flsa = derive2 { name="flsa"; version="1.5.2"; sha256="0c6cdf3hkl3s5yqwbn1qhqhyaw5pgd83a5bc30wbzq03hk7rh9ks"; depends=[]; }; fluoSurv = derive2 { name="fluoSurv"; version="1.0.0"; sha256="1dv4lf7k28bih2qqkpy15f7d14ibxk48p3z6sj3dj5yvh25mhv81"; depends=[]; }; fluspect = derive2 { name="fluspect"; version="1.0.0"; sha256="0j80wx00s8ljqg1qaqw66rj7kxhhk438hb0syv0lr9vld03cxy2w"; depends=[pracma]; }; flux = derive2 { name="flux"; version="0.3-0"; sha256="0pc9cab2pwrfl0fnz29wp7a398r49hvbi50jp8i2fk2rfvck21a7"; depends=[caTools]; }; fluxweb = derive2 { name="fluxweb"; version="0.2.0"; sha256="1ssq90fqm4p0j4g171mx208lmgz3hkxs8hgsffkawpmxgacs0gh1"; depends=[]; }; - flying = derive2 { name="flying"; version="0.1.1"; sha256="0mjn2h8101hkdhas746iqy97dsyyi50bfpi02q0ypfr6zsxji2bq"; depends=[kableExtra knitr Rcpp rmarkdown]; }; - flyio = derive2 { name="flyio"; version="0.1.4"; sha256="1mrv5gvsr4zbh8bghrrizgrqz1cqn4pl3gizr77jl9mlxxpmhx20"; depends=[assertthat aws_s3 googleCloudStorageR stringr]; }; + flying = derive2 { name="flying"; version="0.1.3"; sha256="04wfcsbq8icvk1nnczvic5cp4nb40hxj3g6lasyb1dvhsh0svg0q"; depends=[kableExtra knitr Rcpp rmarkdown]; }; fma = derive2 { name="fma"; version="2.4"; sha256="1x175mhljvplm7b2iwcvkzalv3a79p8gqj9d4f06l5v4shxlrab9"; depends=[forecast]; }; fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; }; fmcmc = derive2 { name="fmcmc"; version="0.2-0"; sha256="0hczf41pykxz8j9y8d2mqawzk5q9w44875jk4p4pf7jbkff5rzxf"; depends=[coda]; }; fmdates = derive2 { name="fmdates"; version="0.1.4"; sha256="1bbcwkh65nf2gak9b81zgg32c5ihwhmai3nc43ayf6ivhqsxw8x0"; depends=[assertthat lubridate]; }; - fmri = derive2 { name="fmri"; version="1.9.2.1"; sha256="0ij6j3hk3rb2vinhh2jxac085qd258zr4jk60difh5krsk9kksyc"; depends=[aws awsMethods metafor nlme]; }; + fmri = derive2 { name="fmri"; version="1.9.3"; sha256="0is9lgp27g8dv3rmxn4mlf9m53izx5j7h974cy3ls3lq0pdp99va"; depends=[aws metafor nlme]; }; fmriqa = derive2 { name="fmriqa"; version="0.3.0"; sha256="1z09nf1c305a78c129jvs21b9z91wyhazz41wrn4bimmhfhx7szv"; depends=[ggplot2 gridExtra imager optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; }; - fmrs = derive2 { name="fmrs"; version="1.0-9"; sha256="1x9g67701kcnz3p97iynr74sn0mfpxpp16mv1l4zxlhhfn2v5lwx"; depends=[survival]; }; fmsb = derive2 { name="fmsb"; version="0.7.0"; sha256="0x1wkzfdvv4s5xmr0whcwjz4aac71gacwymj2c3mzj2bbswwlw45"; depends=[]; }; foba = derive2 { name="foba"; version="0.1"; sha256="1af8whgl66v0vwzdf03b6141k3dysdc0svymlgifcga5gqkwzsl0"; depends=[]; }; focusedMDS = derive2 { name="focusedMDS"; version="1.3.3"; sha256="18s86dbbpyajscqr9frprf2vp1zif7vh4lw5m0cjskfc6gmsdp2p"; depends=[htmlwidgets]; }; @@ -7819,21 +7829,20 @@ in with self; { foodweb = derive2 { name="foodweb"; version="1-0"; sha256="1zm2a87g9bkpz90j9lax28s5hq1w7ia28qqb6vnvr1d7a47g9zi9"; depends=[rgl]; }; foolbox = derive2 { name="foolbox"; version="0.1.1"; sha256="06lcr5v6bcqqxskrwdm16b46zq4h67x8bwqya88jxs5bgi5w0hj3"; depends=[magrittr rlang]; }; forams = derive2 { name="forams"; version="2.0-5"; sha256="1fh3m9896ksv1h7b027yb955bzyv70yafhqvn5crkzalzk3jpb0s"; depends=[vegan]; }; - forcats = derive2 { name="forcats"; version="0.4.0"; sha256="1cnjh23z59fhbjmy7y95425hcq3m5wrwqvahsxwi7zm6d9bwp0vw"; depends=[ellipsis magrittr rlang tibble]; }; + forcats = derive2 { name="forcats"; version="0.5.0"; sha256="1i4hblsjgwkrcwgvgsb5yj33pw1hwdj3lr9dvxymkv1kjdw0x5lg"; depends=[ellipsis magrittr rlang tibble]; }; foreSIGHT = derive2 { name="foreSIGHT"; version="0.9.81"; sha256="1p3w5cs52ph79p2l78apvibr82w7sfbwf8436jfbb4gcahjhmrnk"; depends=[cowplot directlabels doParallel GA ggplot2 moments zoo]; }; - foreach = derive2 { name="foreach"; version="1.4.7"; sha256="0q7iyniw5iri4hl57bhil3r69s5wnaijzn0q0x4h3z42245jqqwm"; depends=[codetools iterators]; }; + foreach = derive2 { name="foreach"; version="1.4.8"; sha256="1xwf5l2fw62w80ji3dvgcc6m9m4s6zygkhi84ypb0gv0ppjffg5c"; depends=[codetools iterators]; }; forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; }; - forecast = derive2 { name="forecast"; version="8.10"; sha256="0jccr2wg7sii38lyqrs58fkxf2az7nw6v0jya27hpbz9bg8ib3kr"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca zoo]; }; + forecast = derive2 { name="forecast"; version="8.11"; sha256="0ayidhnk9cxav2qi83jrvqlg2jh4zlf4lki4xw48gdqsmjvih9x1"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca zoo]; }; forecastHybrid = derive2 { name="forecastHybrid"; version="4.2.17"; sha256="1k3jwxqwkprcf2qr5x1b8hzzdvbyzdiablpvqnr0482x4vza8lmc"; depends=[doParallel foreach forecast ggplot2 purrr thief zoo]; }; - forecastML = derive2 { name="forecastML"; version="0.7.0"; sha256="00zxwdv6nsm8fzizv1gqm682kpr7cnp0j49ihziayp7i9il4wa6k"; depends=[data_table dplyr dtplyr future_apply ggplot2 lubridate magrittr purrr rlang tidyr]; }; + forecastML = derive2 { name="forecastML"; version="0.8.0"; sha256="18a05lp4v4gpplldwx3kwkblnhkplgjiis0jq529sjxk53plyfi1"; depends=[data_table dplyr dtplyr future_apply ggplot2 lubridate magrittr purrr rlang tibble tidyr]; }; forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.3-0"; sha256="0p47x7ic2ib7znqbp8br4b2ci75f5w8x413z9g4n30m002p7irp1"; depends=[Rcpp]; }; - foreign = derive2 { name="foreign"; version="0.8-75"; sha256="0g4mi101srjbl17ydb2hl3854m3xj0llj6861lfr30sp08nkqavl"; depends=[]; }; + foreign = derive2 { name="foreign"; version="0.8-76"; sha256="1z6x2x1z12wnv0z4p74d91r5wfaq30sdz4ynwx0lncz1q45mhbh5"; depends=[]; }; forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; }; forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; }; - forestChange = derive2 { name="forestChange"; version="0.6"; sha256="13zzng022m1jhca0d2w868kqp9h0wfpjmh0xnlb8jl1l4vfc68r9"; depends=[curl raster rgdal rvest SDMTools xml2]; }; + forestChange = derive2 { name="forestChange"; version="1.0"; sha256="1d9qza1f16sz8pyafn3q7cyg9hw0ix4nqcgb9ipcnvmkyrc00f1a"; depends=[curl dplyr gdalUtils ggplot2 landscapemetrics raster rgdal rvest sp tibble xml2]; }; forestControl = derive2 { name="forestControl"; version="0.2.1"; sha256="1m75s98bs8n3qad8gp6a333dh3mbi0rbbic9iwnsqyklzkhmx1nr"; depends=[dplyr magrittr purrr Rcpp tibble]; }; - forestError = derive2 { name="forestError"; version="0.1.0"; sha256="1pmrhzcqywm0qj6csiywfavf5vc6qg66j5qgfhd6yk7h9nvd5gnm"; depends=[doParallel foreach Rcpp]; }; - forestFloor = derive2 { name="forestFloor"; version="1.11.1"; sha256="1sslxq44qmmmdhr7800bz8lj9w2l7f7x1vly3w2z7j1qdijc7nw7"; depends=[kknn randomForest Rcpp rgl]; }; + forestError = derive2 { name="forestError"; version="0.1.1"; sha256="170v57kmzm86q4b2ppx524mx2b5fp50gmlwj8jk64dhrgl8cq6hx"; depends=[doParallel foreach Rcpp]; }; forestHES = derive2 { name="forestHES"; version="1.0-1"; sha256="05l04ly3l8xkdz3rnnrfa4y0wfmh1am2ixbz1vfarnqkc0zppwpj"; depends=[]; }; forestRK = derive2 { name="forestRK"; version="0.0-5"; sha256="0zm0q7bckmjl1j3yh5pw4r6rq64rfmzjvmvqniza5691jagjz60m"; depends=[ggplot2 igraph knitr mlbench partykit pkgKitten rapportools]; }; forestSAS = derive2 { name="forestSAS"; version="1.0.1"; sha256="1jva2nivvcrczvqfhxa6vv1hsazp5m7djgfp7mfp1kpr136lyf2d"; depends=[spatstat]; }; @@ -7841,12 +7850,15 @@ in with self; { forestmangr = derive2 { name="forestmangr"; version="0.9.1"; sha256="1b0yijc1yzgwkypyxb6v03sw32r3zz9rfjw63xiwzspq7hkbpinx"; depends=[broom car dplyr FinCal formattable ggdendro ggplot2 ggpmisc ggthemes gridExtra magrittr minpack_lm plyr purrr rlang scales systemfit tibble tidyr]; }; forestmodel = derive2 { name="forestmodel"; version="0.5.0"; sha256="09gwgsh42gkmhs8ijq5xfbbkb1hk6sjb0q32mw2ymc6x9ycr1a9j"; depends=[broom dplyr ggplot2 lazyeval tibble]; }; forestplot = derive2 { name="forestplot"; version="1.9"; sha256="1vcma7dvlvyhz6n25pj19h70i8xmz6vibkf945qkmj5hhrb7zxia"; depends=[checkmate magrittr]; }; + forestr = derive2 { name="forestr"; version="2.0.1"; sha256="1rxyp7d6np9qawrhc66fkdwylddnkha4d311c9w1x09pbnkwqzs8"; depends=[dplyr ggplot2 moments plyr viridis]; }; foretell = derive2 { name="foretell"; version="0.2.0"; sha256="18vi438n480gizfhnciw67gngvbjnmky19186b1wy75av7fgc1gp"; depends=[nloptr]; }; forge = derive2 { name="forge"; version="0.2.0"; sha256="0pjfzsc35agkh0zfw2czwajkbsyn6liys5irl5bhz5r1vim3jmwa"; depends=[magrittr rlang]; }; formatR = derive2 { name="formatR"; version="1.7"; sha256="1nsxbrx31k3y6yql30qkrvdfyznlia2qfvwv95mfiy7m7wdn4rm3"; depends=[]; }; formattable = derive2 { name="formattable"; version="0.2.0.1"; sha256="1s7jjgm0j24vdwm39933ygh6xnxcfvzy4kl2mmfgas4czfcmd4rf"; depends=[htmltools htmlwidgets knitr rmarkdown]; }; formula_tools = derive2 { name="formula.tools"; version="1.7.1"; sha256="15d3ikfmsh9zszfgfkrxb3jkipl41inm7n6bhs73kwlnklnygq2g"; depends=[operator_tools]; }; formulaic = derive2 { name="formulaic"; version="0.0.6"; sha256="020sbchj445kwwfj17ixmhsgl38qpwb723r6r8pbc6b3q0zw4b3d"; depends=[data_table DT]; }; + formulops = derive2 { name="formulops"; version="0.5.0"; sha256="1mkpv5xjykrhgknq0gh4yg2a3j4xb8q2d6dh0wv8zd9h59hvrzda"; depends=[]; }; + forrel = derive2 { name="forrel"; version="1.0.0"; sha256="1spyr0mzan00ky8zcbbpzk36k4i70n7s04p4zxgk2gj6736lzbii"; depends=[glue maxLik pedmut pedprobr pedtools]; }; fortunes = derive2 { name="fortunes"; version="1.5-4"; sha256="109ly9kpfn6hy294ava8795wy5z9l1bnl98hhhv8kn9naf4camdg"; depends=[]; }; forward = derive2 { name="forward"; version="1.0.5"; sha256="0cc0s534s32b9ark2zazwqhgy0zsxb2p63r6503v82784rpqv2yv"; depends=[MASS]; }; forwards = derive2 { name="forwards"; version="0.1.3"; sha256="07374a1ak5h8q3diqyvsw3q1grqi3679w9sshf1jkhlrj7wn0dmv"; depends=[]; }; @@ -7856,18 +7868,19 @@ in with self; { fourierin = derive2 { name="fourierin"; version="0.2.4"; sha256="140721p4h5mjr7r25ckv8wfhbj88xw6v47b613r5bpalg8gw650l"; depends=[Rcpp RcppArmadillo]; }; fpCompare = derive2 { name="fpCompare"; version="0.2.3"; sha256="1pyv52rvbqd5v6ns86pc119q019ps070bd819x7a98s4hmbf76zq"; depends=[]; }; fpa = derive2 { name="fpa"; version="1.0"; sha256="0kgpl9qq0l10h0vdd2f8vnir0kdylh1jvvv5z4d9ygj1pl9qywhk"; depends=[fields reshape]; }; - fpc = derive2 { name="fpc"; version="2.2-4"; sha256="1gsnl5sbdg86b2wdrsy6wq83xj6mrziiq7rxa8cqksgljc7gp6yf"; depends=[class cluster diptest flexmix kernlab MASS mclust prabclus robustbase]; }; + fpc = derive2 { name="fpc"; version="2.2-5"; sha256="10504hzivbn89ip0cd5bcxd36ivbgin1lw1xhyh3xfckcm25v1a5"; depends=[class cluster diptest flexmix kernlab MASS mclust prabclus robustbase]; }; fpca = derive2 { name="fpca"; version="0.2-1"; sha256="13b102026xlfb7c2rb3xsqsymm7xpmaxppaafjkb5dx0b1lz0jrc"; depends=[sm]; }; fpeek = derive2 { name="fpeek"; version="0.1.1"; sha256="0x7q5rl02ih0zmjfzvsc1vmn7s7yzdkf2gbmzc3mh7qadwpnf89p"; depends=[Rcpp]; }; fpest = derive2 { name="fpest"; version="0.1.1"; sha256="013r8295spm02j558aqvnrnbkg2g73gl5vi4lqzngbw8yr8qlkri"; depends=[]; }; - fplot = derive2 { name="fplot"; version="0.2.0"; sha256="0sq662qblkq6yngi5d98byjmf2xyfq9rlrg8pl1gr3pn000wi8b3"; depends=[data_table Formula Rcpp]; }; + fplot = derive2 { name="fplot"; version="0.2.1"; sha256="0ryb1pfx1qp4vlzpy4a3c0wqk6k9ds44xy12n056jyqiggc7kd12"; depends=[data_table Formula Rcpp]; }; + fplyr = derive2 { name="fplyr"; version="1.1.0"; sha256="0s76hzmqal9fmpwgg996l86vz156lwkhfb2ag996m4h6m37zgqx7"; depends=[data_table iotools]; }; fpmoutliers = derive2 { name="fpmoutliers"; version="0.1.0"; sha256="108bp3smk9jnckd5237xly4ywmal03rq1kidq5z61l6zrhc3yfh9"; depends=[arules doParallel foreach Matrix pmml pryr R_utils XML]; }; fpop = derive2 { name="fpop"; version="2019.08.26"; sha256="1gz5db9hlkvzkp5y7zzn9h57qz7ilpdyxyf05vy9kxbj36kgc19n"; depends=[]; }; fpow = derive2 { name="fpow"; version="0.0-2"; sha256="0am3nczimcfrm9hi02vl2xxsh703qjmr2j11y014mll3f2v1l8cy"; depends=[]; }; fpp = derive2 { name="fpp"; version="0.5"; sha256="1jqnx6bgpvnbbj2fa2b6m6aj8jd5cb9kz877r8kp7a5qj62xv1ww"; depends=[expsmooth fma forecast lmtest tseries]; }; fpp2 = derive2 { name="fpp2"; version="2.3"; sha256="1krrvwg25qjfpfjdwd3n0d87ihl4zf7y1bnh6gbi92sdja3ljq48"; depends=[expsmooth fma forecast ggplot2]; }; - fpp3 = derive2 { name="fpp3"; version="0.1"; sha256="17j5y1y46dn21049rfiwr7j0f5q2kc6jvxdpw252l063dqdb9pd9"; depends=[cli crayon dplyr fable fabletools feasts ggplot2 lubridate magrittr purrr rstudioapi tibble tidyr tsibble tsibbledata]; }; - fptdApprox = derive2 { name="fptdApprox"; version="2.1"; sha256="00vxwcwca7zfm4fr0x9898snr6j0474ci1bahjmpj2jxiclwnhzs"; depends=[]; }; + fpp3 = derive2 { name="fpp3"; version="0.2"; sha256="0346g5cj876kd34hvkjl3yn25i3k3ypbnp5qnqk7nahz8akdk0g2"; depends=[cli crayon dplyr fable fabletools feasts ggplot2 lubridate magrittr purrr rstudioapi tibble tidyr tsibble tsibbledata]; }; + fptdApprox = derive2 { name="fptdApprox"; version="2.2"; sha256="10f9n6cx5n6djblj97a2zw4khaj3phchmq4l8gk2fy535jjqaqlr"; depends=[]; }; fracdiff = derive2 { name="fracdiff"; version="1.5-1"; sha256="1dhfjlhr9sb38qgpsx0sm73l9lgc13d0fk32l7fmjfnalhr3n45q"; depends=[]; }; fracprolif = derive2 { name="fracprolif"; version="1.0.7"; sha256="124p5x59smqf8ba0xwhlq69w77zga2bv9plzwkadf700lzvaj2wx"; depends=[emg numDeriv]; }; fractal = derive2 { name="fractal"; version="2.0-4"; sha256="18lr9z0gslvfc3z8vyj3krqj3bfhg60zv1fzinrwwkc4cpk1w7mp"; depends=[ifultools MASS sapa scatterplot3d splus2R wmtsa]; }; @@ -7887,17 +7900,15 @@ in with self; { fredr = derive2 { name="fredr"; version="1.0.0"; sha256="1hv51m0ihdpb73rp2gwj2q2xpjzlqpf9p3xzqdmy9nhwpfbj14nh"; depends=[httr jsonlite rlang tibble]; }; freealg = derive2 { name="freealg"; version="1.0-0"; sha256="0a3s89379lxr0dw068wfwzlqjq70zbaxil1vwwa4bf2i7s46mcgl"; depends=[Rcpp]; }; freegroup = derive2 { name="freegroup"; version="1.1-0"; sha256="0ssshs2d6l2ip1xx9x581w0cdnd2459a1mh360ybwajkjgak2ci6"; depends=[magic magrittr plyr]; }; - freeknotsplines = derive2 { name="freeknotsplines"; version="1.0.1"; sha256="1yl53rnngrpj5mv1fgd0rgiqaw431g4ckxl1bq0l712647njx02a"; depends=[]; }; - freestats = derive2 { name="freestats"; version="0.0.3"; sha256="0b18n8idap089gkmjknzzb94dvs2drpdqs0mrw7dqnacxgbbqwfj"; depends=[MASS mvtnorm]; }; freesurfer = derive2 { name="freesurfer"; version="1.6.5"; sha256="0g5rpskwgxx37b60vxn89kf2d6b2y66v508xyrsx3h47q973kjia"; depends=[neurobase R_utils reshape2]; }; - freesurferformats = derive2 { name="freesurferformats"; version="0.1.7"; sha256="0451m10kcn8zngsv8nfz9na7pw7apf15zxdp9ny63plfs063340z"; depends=[pkgfilecache]; }; + freesurferformats = derive2 { name="freesurferformats"; version="0.1.8"; sha256="13lqkw5bmbqviqsxb75ij8jicrgdxpahng5x5arazn38sksb9cg9"; depends=[pkgfilecache]; }; freetypeharfbuzz = derive2 { name="freetypeharfbuzz"; version="0.2.5"; sha256="11agmqdp6sy32jk2840cj8wmgywq0yjar18zsnsn56qfvn4b1k1c"; depends=[fontquiver]; }; freqdist = derive2 { name="freqdist"; version="0.1"; sha256="1pb45jabv9s3qa7v1isd5wm9b0g9p04q5h18spcaax8397s0d2fv"; depends=[]; }; freqdom = derive2 { name="freqdom"; version="2.0.1"; sha256="0ig0ygnlcb5ndjjm5x8jpp37gvgwli9xv6zsvbbgfh72q418qswp"; depends=[matrixcalc mvtnorm]; }; freqdom_fda = derive2 { name="freqdom.fda"; version="0.9.1"; sha256="15wq9s3v441dybc8kglpbv9hdvsr9rjjq4qp4d2ipxglfp0iqj9p"; depends=[fda freqdom mvtnorm]; }; freqparcoord = derive2 { name="freqparcoord"; version="1.0.1"; sha256="011p8xh0i0x0w5rv5qz5a7fxwdhxd8l2bqi9bxv5almxd0y7ajqx"; depends=[FNN GGally ggplot2 mvtnorm]; }; frequency = derive2 { name="frequency"; version="0.3.1"; sha256="0m3vgcwldl7zv0nwdwfz80qanibmfp8j5iv79kydhrmzzr04rbf5"; depends=[DT ggplot2 gtools knitr rmarkdown]; }; - frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.1"; sha256="006cb7x65if7md5w6w90nacdmg39pv7dc8zxvchc52kmfzlps0ds"; depends=[knitr pbapply urca vars]; }; + frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.2"; sha256="1mn20isy146ya4i33xxszmhvdwqkkg0cd18002mq8bvnkb65fxd2"; depends=[knitr pbapply urca vars]; }; frequentdirections = derive2 { name="frequentdirections"; version="0.1.0"; sha256="0rmifh221c8z3cqyqg0bfxnih9f64hvv98jz44i6grnlablfwwgw"; depends=[ggplot2]; }; fresh = derive2 { name="fresh"; version="0.1.0"; sha256="101ycxwk1z59zb2p6hfg4a8l565gfqbzmhw60nz22fql4gyhl8q9"; depends=[htmltools rstudioapi sass shiny]; }; frm = derive2 { name="frm"; version="1.2.2"; sha256="1dl0vca9r2dams99sc13pfpi0b3yb02x59f4c1jz07zz005c8l23"; depends=[]; }; @@ -7910,7 +7921,7 @@ in with self; { frost = derive2 { name="frost"; version="0.0.4"; sha256="03snjlq4b9j84v0yimc3xzgjvryzzi76b9n53k0s2lvv1yzrri7x"; depends=[]; }; frostr = derive2 { name="frostr"; version="0.1.0"; sha256="02ygg5dxpnv72gpwwsarhkl5hk6hldxjqpw875p7hb1ny7khgmfg"; depends=[httr jsonlite tibble tidyr]; }; frt = derive2 { name="frt"; version="0.1"; sha256="1qy76a1wkznaqzlyj1nq74mf1pnyly1s8gnff8q30zfccqk68cxv"; depends=[]; }; - fs = derive2 { name="fs"; version="1.3.1"; sha256="1g26rgx13dzigp2vrlld6h28q33lwbax97zvwdrq2pc3iz54v4yn"; depends=[Rcpp]; }; + fs = derive2 { name="fs"; version="1.3.2"; sha256="1w30bflx4d7a6f3dn96bf7s7v6aqpvz2yzzxal6qz9jyhb16bxaz"; depends=[Rcpp]; }; fsbrain = derive2 { name="fsbrain"; version="0.0.3"; sha256="1s7i9rpazp5s3vnm9y6ajpy06wbd7gjdzr9mbndjnsb9w985957a"; depends=[dplyr fields freesurferformats pkgfilecache reshape rgl squash]; }; fscaret = derive2 { name="fscaret"; version="0.9.4.4"; sha256="18fhyfl3f8syyc3g937qx87dmwbv7dray6b97p1s6lnssiv61gsw"; depends=[caret gsubfn hmeasure]; }; fsdaR = derive2 { name="fsdaR"; version="0.4-9"; sha256="1iaqqdwhh29fhq4r64adfrjmsyzq4v60bz9111vkazj4kr45wxxv"; depends=[ggplot2 rJava rrcov]; }; @@ -7941,17 +7952,17 @@ in with self; { funchir = derive2 { name="funchir"; version="0.1.4"; sha256="1mbsy65628q117c2k01wvibpjd3ibigy4yc1c8m0rf9jwsc67qjb"; depends=[data_table]; }; functional = derive2 { name="functional"; version="0.6"; sha256="120qq9apg6bf39n9vnp68db5rdhwvnj2vi12a8j8243vq8kqxdqr"; depends=[]; }; functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; }; - funcy = derive2 { name="funcy"; version="1.0.1"; sha256="08r9nyqq83vzaddxcqwf4zilkz935p40vssfn3afs1bkkda5xyya"; depends=[calibrate car cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; }; + funest = derive2 { name="funest"; version="0.0.1.3"; sha256="1pi556klfnbmrsx5c0f3v4hdn5m4dxxm71ijivanpwfqnfls8xh3"; depends=[funData MFPCA pec prodlim purrr ranger Rdpack survival tdROC]; }; fungible = derive2 { name="fungible"; version="1.95.2"; sha256="031z94a5ayc8sd7vgwj0g1wxzq28mibnr9a0wskgfgvhm80f8pmd"; depends=[clue GPArotation lattice MASS mvtnorm nleqslv Rcsdp RSpectra]; }; funique = derive2 { name="funique"; version="0.0.1"; sha256="0p9k4nxjns1xid9vmslkaap0hm6yq6pbyvylgygd808if4q1z8k6"; depends=[]; }; funnelR = derive2 { name="funnelR"; version="0.1.0"; sha256="143lb048krgh8rkkz6sm8h464kdy62w29fvvyar795vqi10bb5fy"; depends=[ggplot2]; }; funneljoin = derive2 { name="funneljoin"; version="0.1.0"; sha256="17g1mvq9z5m29r0v2r2nn8980j515jamnpwvvnzj83vk84bz94rq"; depends=[broom dplyr glue magrittr purrr rlang tibble tidyr]; }; - funprog = derive2 { name="funprog"; version="0.1.0"; sha256="1npyijpsbb9n3z8pyvf2pbnf67jlcqw4wl2jm860i3z13j1cnhmn"; depends=[]; }; + funprog = derive2 { name="funprog"; version="0.2.0"; sha256="1gs0mahvzgnv5pfvz32acq0jk3rnssg6bxqzlqpyqg0r3g4m80mf"; depends=[]; }; funr = derive2 { name="funr"; version="0.3.2"; sha256="11mjd1ba9kwawh7k5py54mkq4g1df79d7qivan8fj11qfwfzm679"; depends=[]; }; - funrar = derive2 { name="funrar"; version="1.3.1"; sha256="1i206awpkc5vvi3aii5kszf57wipqqkqply2xfn0b969fnd0ln6x"; depends=[cluster dplyr]; }; + funrar = derive2 { name="funrar"; version="1.4.0"; sha256="15pbc5v6ncs96hbka4nxxm33nbd7q0nign7wa136prziqnsyndwi"; depends=[cluster dplyr]; }; funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; }; funtimes = derive2 { name="funtimes"; version="6.1"; sha256="1qr0z0nn3dv2yxq4sacsm0xs4pnda31zc10rz427rdyjrps85838"; depends=[dbscan Jmisc Kendall Rdpack]; }; - furniture = derive2 { name="furniture"; version="1.9.5"; sha256="1vls4x1nppi1ivra7jyhh9cqixpjf6gixk6hcirqnbb4vr4zww2p"; depends=[crayon dplyr knitr magrittr rstudioapi tibble]; }; + furniture = derive2 { name="furniture"; version="1.9.7"; sha256="1czc1ayfpqf6h7n5fjzx1vwkzm9vg1dr62hl5k511b9kdc8lfsfh"; depends=[dplyr knitr magrittr]; }; furrr = derive2 { name="furrr"; version="0.1.0"; sha256="1ld9aa9hydna94hgm6p91zjbfv1dz1vsgchjlpknkg6irbvkfafx"; depends=[future globals purrr rlang]; }; fusedest = derive2 { name="fusedest"; version="1.3.1"; sha256="1nz5bkvn8y9f8h0ya6wblryg7bwj1vnz1vyqmd1hfr85bxfgl83c"; depends=[igraph Matrix Rcpp RcppEigen]; }; fuser = derive2 { name="fuser"; version="1.0.1"; sha256="17lsfpd9hdichj3wflac896zyjbq7a8w2gmlgj8nbgg80f646fgr"; depends=[glmnet irlba Matrix Rcpp RcppEigen RSpectra]; }; @@ -7971,8 +7982,8 @@ in with self; { fuzzr = derive2 { name="fuzzr"; version="0.2.2"; sha256="1cwq7a5j6lzrlz9dw3hsfap988rh1kkgf03yni7c33zl69xp5w77"; depends=[assertthat progress purrr]; }; fuzzyFDR = derive2 { name="fuzzyFDR"; version="1.0"; sha256="0zd8i9did0d9gp42xjmwrccm32glabvvy08kl8phhwb1yaq53h7w"; depends=[]; }; fuzzyRankTests = derive2 { name="fuzzyRankTests"; version="0.3-10"; sha256="1xj5xsm2s4ylv3b8v80qny201iddjym07h8d50asas7xy1k7945z"; depends=[]; }; - fuzzySim = derive2 { name="fuzzySim"; version="2.0"; sha256="00rl5npz656hwpd1ah8bgh9baqpa9z2lgxc44amm5w3pb9pqjkbs"; depends=[]; }; - fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.6"; sha256="1g8vmz0srddw879prk7br535rdrgngpiyz2m0zchwahfjkn7yqz5"; depends=[doParallel doRNG foreach ggplot2 mvtnorm randomForest]; }; + fuzzySim = derive2 { name="fuzzySim"; version="3.0"; sha256="18h0lxzqyp7fzjv7vnyfbwpaxjx15sw0h9l5yq846xzhkza79xxp"; depends=[]; }; + fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.7"; sha256="0asm0vxwqy5834lc5kj86hsgib33hgg5bkf61k19rq8gb23hak3g"; depends=[doParallel foreach ggplot2 mvtnorm randomForest]; }; fuzzyjoin = derive2 { name="fuzzyjoin"; version="0.1.5"; sha256="1lz7zxpqn206rgk956c4z9sfj3rg66pwcyci7d3r63cbgynq1gcs"; depends=[dplyr geosphere purrr stringdist stringr tibble tidyr]; }; fuzzyreg = derive2 { name="fuzzyreg"; version="0.5.1"; sha256="19ppb1m655z3n7h4wcd5bwjciw4ynjbi883ki50mr5di3zy64n4r"; depends=[limSolve quadprog]; }; fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.3"; sha256="1kbli1m44317m95a0r34vza9p27vd9ala05jrbrdkadninwdynal"; depends=[R6 reticulate]; }; @@ -7988,54 +7999,53 @@ in with self; { gDefrag = derive2 { name="gDefrag"; version="0.2"; sha256="0z2jbb53x0knxajap1f2w25s732xqy1fyayxh2mzlbhm0zf3pjjw"; depends=[igraph maptools rgdal rgeos sp]; }; gIPFrm = derive2 { name="gIPFrm"; version="3.1"; sha256="08rfdac442picbw1r3xyxjzf2dc57svg44am0714z4r72mshvj04"; depends=[]; }; gLRTH = derive2 { name="gLRTH"; version="0.2.0"; sha256="1drmmr576n3pbr0q1cnnx4k7r4iz061n2cizv1kpr3wcc1g291pn"; depends=[]; }; - gMCP = derive2 { name="gMCP"; version="0.8-14"; sha256="11q2d4a352z7c0ln10mdpms1cl4bh5hqmg9avmbxw54z4i00mdvy"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; - gMOIP = derive2 { name="gMOIP"; version="1.3.0"; sha256="0v3hxy95g9nl5njmlskb18c5icsyq5n1sg41lm8gpgx4qp5fd4zb"; depends=[geometry ggplot2 ggrepel MASS plyr rgl]; }; - gMWT = derive2 { name="gMWT"; version="1.1"; sha256="1ws96x3vjswh6m6s9zn3r9gp7xp6ybdkkxsq9a73ng2zqz2qjdl0"; depends=[clinfun Rcpp RcppArmadillo]; }; + gMOIP = derive2 { name="gMOIP"; version="1.4.3"; sha256="0zk2m81kbsb40bjgvv29cl7azr2kfa528ph1lhrp88zsiv3hv3py"; depends=[dplyr geometry ggplot2 ggrepel MASS Matrix plyr purrr Rfast rgl rlang]; }; + gMWT = derive2 { name="gMWT"; version="1.1.1"; sha256="1vbw548fyrf012ry54p3gybdsil8c9llg2r9njhsiy7rb0gz2613"; depends=[clinfun Rcpp RcppArmadillo]; }; gPCA = derive2 { name="gPCA"; version="1.0"; sha256="1ylb1d24dxnzpws9bbanwhyizjr3ljky2bhrph4c5yaq0zwwbrkw"; depends=[]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; gProfileR = derive2 { name="gProfileR"; version="0.7.0"; sha256="1h1v0kgpsn04ald2izznh7fr2riwisj5hcgz4k7h3qc931rf0r4k"; depends=[plyr RCurl]; }; - gRain = derive2 { name="gRain"; version="1.3-3"; sha256="1vbsvnipy014lda8djxz5a81c0c967hci31jlmkkg5523p8l2g6r"; depends=[graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; + gRain = derive2 { name="gRain"; version="1.3-4"; sha256="0gd04qd92mnd9j9r1ln3m19dywkbx4aq979lxm0csm7d0vhbdq99"; depends=[graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; }; - gRbase = derive2 { name="gRbase"; version="1.8-5.1"; sha256="04xccgrprzv1hs6v19fiy4fcyp9frsrrsw6nyw1ksh8cx4w681ar"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; + gRbase = derive2 { name="gRbase"; version="1.8-6.4"; sha256="08rp6jjpcxzzad617fycc4yq7jlkclkvfa3dvb2qj4k4g1xpl2h9"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; gRc = derive2 { name="gRc"; version="0.4-3.2"; sha256="0f8m83wqhmsn6p0v0msdzyy9vl900nc9ddr8y78181jxcd9mqd0d"; depends=[gRbase MASS]; }; - gRim = derive2 { name="gRim"; version="0.2-0"; sha256="0ihl4vsnp6xkcpcf37p2xcqnbvyvjamcz5060f1kirn8xzwzq29y"; depends=[gRain graph gRbase igraph Rcpp RcppArmadillo]; }; + gRim = derive2 { name="gRim"; version="0.2.1"; sha256="0j5r4pnjmyc9z0yfs8bgp0w8w4prlqwvnxmg5pm5gz09h8kkd2qq"; depends=[gRain graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; gSEM = derive2 { name="gSEM"; version="0.4.3.4"; sha256="18kh41ibvfflz59gykiq7j2c6a72i8b0w8c2mcprd1nzhnyhvmhy"; depends=[DiagrammeR htmlwidgets knitr MASS]; }; gSeg = derive2 { name="gSeg"; version="0.6"; sha256="19njl093qidwjcwzxkzip78ahgq3zwhc0kscvhjpzb49qkg3srrj"; depends=[]; }; gStream = derive2 { name="gStream"; version="0.2.0"; sha256="1f4xnbavm99yhjmaahazigps41mqlfvvl29kf4fs1yjqr531y36b"; depends=[]; }; gTests = derive2 { name="gTests"; version="0.2"; sha256="1h1sd8mrzcniq7rx7frdlxwpnsn8lifng1x99fqq703hs3znl1yq"; depends=[ade4]; }; - gWQS = derive2 { name="gWQS"; version="2.0.0"; sha256="1ip8zmnvdrw5m2rcfzj4xw9fv5i74909lnxk9m3y8l3vl5iavn8y"; depends=[broom dplyr future future_apply ggplot2 ggrepel kableExtra knitr MASS nnet plotROC pscl reshape2 rlist Rsolnp]; }; - gWQSRS = derive2 { name="gWQSRS"; version="1.1.0"; sha256="1k8yxql65grp2nr4i966139ywz3wwj5vf5nqwgqv4fwxfsmv9mga"; depends=[aods3 broom dplyr future future_apply ggplot2 ggrepel gWQS kableExtra knitr MASS nnet plotROC pscl reshape2 rlist Rsolnp]; }; + gWQS = derive2 { name="gWQS"; version="2.0.1"; sha256="1yl8c9v66n5zbkdcxbrzmjdf24in3gkrxgnyr2lc7pi414zb2dbg"; depends=[broom dplyr future future_apply ggplot2 ggrepel kableExtra knitr MASS nnet plotROC reshape2 rlist Rsolnp]; }; + gWQSRS = derive2 { name="gWQSRS"; version="1.1.1"; sha256="1nhh4g40fl60fnbjn92i6knj9cxd73hd4zr553cmrdr5i3gsmsl2"; depends=[aods3 broom dplyr future future_apply ggplot2 ggrepel gWQS kableExtra knitr MASS nnet plotROC reshape2 rlist Rsolnp]; }; gWidgets = derive2 { name="gWidgets"; version="0.0-54.1"; sha256="1vwwjpi4lbgzw3fw3j9cccs9qhqa11v5hvq4hv5px373dla8pcn2"; depends=[]; }; gWidgets2 = derive2 { name="gWidgets2"; version="1.0-8"; sha256="0p6lav6lrwgsw29sl8vshzgi8j2smcavx047qq31s9bsn2dcw58n"; depends=[digest]; }; gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-7"; sha256="14c933j0wj3lb5da75zxg3w3mfqh0nqk8rczbi4dnqd8sna6jks9"; depends=[gWidgets2 memoise RGtk2]; }; gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-6"; sha256="0arh0yxx63m4df1ccrv0q3vkjncwv3ink8vkalp6ashi2932yfma"; depends=[digest gWidgets2 memoise]; }; gWidgetsRGtk2 = derive2 { name="gWidgetsRGtk2"; version="0.0-86"; sha256="0b1xqffbzxlaaaqf1vzfl0a7b6wnnslsp8v5fbxblv7w951rsc4m"; depends=[cairoDevice gWidgets RGtk2]; }; gWidgetstcltk = derive2 { name="gWidgetstcltk"; version="0.0-55"; sha256="06991rqh4927bal7j718bn2ziy6rws8yq682lmp5vbqhdd36afv2"; depends=[digest gWidgets]; }; + gadget2 = derive2 { name="gadget2"; version="2.3.5"; sha256="1v1qg6rj3q09vkwhj5l3ijzyrgdp36fxkpv55q7l22b47b2krv17"; depends=[]; }; gafit = derive2 { name="gafit"; version="0.5.1"; sha256="160z3cv22prf7118447dla9g1gimwkfad8zdil3fg8n4l22rk51a"; depends=[]; }; gaiah = derive2 { name="gaiah"; version="0.0.2"; sha256="1qc3crjxramyxl86dp8mcmvskixny7x6ji0jqf5dqf5r5qc7zrs9"; depends=[dplyr geosphere ggplot2 lazyeval magrittr maptools raster rgeos sp stringr tidyr]; }; gainML = derive2 { name="gainML"; version="0.1.0"; sha256="1mqhrdjdmc2n7dxilxkqn6xq7z0qnxpigw5bbffnjvvsmdamah0n"; depends=[fields FNN]; }; gains = derive2 { name="gains"; version="1.2"; sha256="1nmrhc7qjlyzn04r1qyjdws5fin3idmi789kbxzilax12ya8xr7k"; depends=[]; }; - galgo = derive2 { name="galgo"; version="1.4"; sha256="1v150flk1x0rixpgvi8crd5iq28w4jk8h2iyv48hz5qmm2pvz1li"; depends=[e1071 MASS nnet R_oo randomForest rpart]; }; galts = derive2 { name="galts"; version="1.3.1"; sha256="0jg0yng1kc6s0qdhq8ps38dsxdcrgdcn8dl2dlclw6rcbknb6h4k"; depends=[DEoptim genalg]; }; gam = derive2 { name="gam"; version="1.16.1"; sha256="1fbldshnfy37bpqprazwp1rkyh9f67mr2krnxpl4688mqq143l40"; depends=[foreach]; }; - gamCopula = derive2 { name="gamCopula"; version="0.0-6"; sha256="0fz6phhdmk0zd3irki4kj5wkpdjbgxd4svw6pinpk4vg3qwz83jd"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; + gamCopula = derive2 { name="gamCopula"; version="0.0-7"; sha256="0zi9g2vxkn1hxc2qyyr1x8p1f9w7fc1j5dmm2mmm333gixkkz9nb"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; gamRR = derive2 { name="gamRR"; version="0.7.0"; sha256="0zn8921a4i1lz5wpdfbd72pqb25r12abyqw7y2w53kfhdzs57f3l"; depends=[boot mgcv]; }; gama = derive2 { name="gama"; version="1.0.3"; sha256="1k79m01r3y9am62414947zfwb1w1gh0nn48najivbjyk9i2avn9r"; depends=[ArgumentCheck cluster clusterCrit GA ggplot2 NbClust Rfast]; }; gamair = derive2 { name="gamair"; version="1.0-2"; sha256="1cjrd576l9md1jb1fc1y6iay5y49i0d8by024qsc7yik6f6mdl13"; depends=[]; }; - gambin = derive2 { name="gambin"; version="2.4.1"; sha256="03n5zcwfq8g1vk5w22hw8fhqkc63zz4g9d3gdxa5g8v7v56l3dqy"; depends=[doParallel foreach gtools]; }; + gambin = derive2 { name="gambin"; version="2.4.3"; sha256="0rb4yh01kk2nbw9dl9vhsd9c7c1fi3pq5f0h7lmngi8zlf80rk69"; depends=[doParallel foreach gtools]; }; gamboostLSS = derive2 { name="gamboostLSS"; version="2.0-1"; sha256="06n2xk7k24gz95jy1cr6shpfd89ylispq6mn3fvxblqdf8vhdixj"; depends=[mboost stabs]; }; gamboostMSM = derive2 { name="gamboostMSM"; version="1.1.87"; sha256="0if0x92lch57ksll8d5i3jzk0kh40593b20c17g3hvc33920c7r0"; depends=[mboost]; }; - gameofthrones = derive2 { name="gameofthrones"; version="1.0.0"; sha256="15jgpv197aqb56iyp4afjajx2rcxz21dhigx9mxipa0b8g2h0s6k"; depends=[ggplot2 gridExtra MASS]; }; + gameofthrones = derive2 { name="gameofthrones"; version="1.0.2"; sha256="10ns4yl1s8adlf334gl8yararj1fpxbg3gy7h69s554m4h878awk"; depends=[ggplot2 gridExtra MASS]; }; games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; }; - gamesGA = derive2 { name="gamesGA"; version="1.1.3.6"; sha256="1agvh27m5sy8psbsw9nbi39wl7cf406fl9sd9hkc14139w9drfwv"; depends=[shiny]; }; + gamesGA = derive2 { name="gamesGA"; version="1.1.3.7"; sha256="0km0z2haqgykl01xkzsbkpwibavgqfjygx7cg08ni68gw501689l"; depends=[shiny]; }; gamlr = derive2 { name="gamlr"; version="1.13-5"; sha256="0fc27b6qcm01drb7pb14wri2hlb464jig3x7sb8njwrxcqqia14n"; depends=[Matrix]; }; - gamlss = derive2 { name="gamlss"; version="5.1-5"; sha256="0gcngfck0dk2rhjg0z1fnc61dqs0s049jy2rkywaf57531s2k8bc"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; - gamlss_add = derive2 { name="gamlss.add"; version="5.1-5"; sha256="1fw60f07b7yx7aw00915z49w1d6d7dm4b2sqvcji1682milnxa3n"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; + gamlss = derive2 { name="gamlss"; version="5.1-6"; sha256="16b7ick1khvldbvfmmpw9cjs1vznnrisvifq7717fxzd8c9s5jdr"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; + gamlss_add = derive2 { name="gamlss.add"; version="5.1-6"; sha256="0g80bn0nszs2nmka6dypyvqnsgxp7mzhf5nd82n5x4jm3ca3dbdj"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; gamlss_cens = derive2 { name="gamlss.cens"; version="5.0-1"; sha256="1s83dgifidvc6cbrqirwlvwfzg08mlhmxxiqkbmnsy09i5j9fzd3"; depends=[gamlss gamlss_dist survival]; }; gamlss_countKinf = derive2 { name="gamlss.countKinf"; version="3.5.1"; sha256="1xalp909gxxhyhh4chlr1ssyfhydhw1w3szzbynajji98576zaqv"; depends=[gamlss gamlss_dist]; }; gamlss_data = derive2 { name="gamlss.data"; version="5.1-4"; sha256="1dgfspbmps6ipzcmw681wjdp320nm50dwsxafgrcwxndqgc7fdqd"; depends=[]; }; gamlss_demo = derive2 { name="gamlss.demo"; version="4.3-3"; sha256="01p6abppwbnh2a2ks1g08z4iwq2fxf125y9s4qzssybsn76a3gf3"; depends=[gamlss_dist gamlss_tr rpanel]; }; - gamlss_dist = derive2 { name="gamlss.dist"; version="5.1-5"; sha256="1rl7hzdg5xpvaq3yyzwxhsaqzzs0qidi3ibv454fisijgv8l4vqw"; depends=[MASS]; }; + gamlss_dist = derive2 { name="gamlss.dist"; version="5.1-6"; sha256="1p904x0b07z4amaqdn2xhs7qzbq8lisr6lqc844s3pkxzmny7w1z"; depends=[MASS]; }; gamlss_inf = derive2 { name="gamlss.inf"; version="1.0-1"; sha256="0m091zxjm5wvhm6mzbpzkr275n3qnlb3v4099k0a1jymahk4w7vr"; depends=[gamlss gamlss_dist]; }; gamlss_mx = derive2 { name="gamlss.mx"; version="4.3-5"; sha256="1jfs3ib2imwgazf8v23fa12iaflv0pm944bkqklx8qcljxp1lcs7"; depends=[gamlss gamlss_dist nnet]; }; gamlss_nl = derive2 { name="gamlss.nl"; version="4.1-0"; sha256="083l5lsb0csxcp4vffvdv2nr7jk3s2gkcavx66m8inzw16j7xilz"; depends=[gamlss survival]; }; @@ -8049,26 +8059,25 @@ in with self; { gamreg = derive2 { name="gamreg"; version="0.3"; sha256="1svrgbb8qdy2hzpq1g38v2lzmlbrn7qljix827biqzwgiajy69gg"; depends=[doParallel foreach glmnet Rcpp RcppArmadillo robustHD]; }; gamsel = derive2 { name="gamsel"; version="1.8-1"; sha256="107hbshi36dcyykhy6w1i1ih84xwdqv1q3nad73d3krf7bhvhg5f"; depends=[foreach mda]; }; ganalytics = derive2 { name="ganalytics"; version="0.10.7"; sha256="03jf7325cgg5p6lzcrzzzx0b40vf3l5vhw95lih098kpmlr1zadf"; depends=[assertthat googleAnalyticsR httpuv httr jsonlite lazyeval lubridate plyr R6 rvest scales selectr stringr tibble XML xml2]; }; - gap = derive2 { name="gap"; version="1.2.1"; sha256="1dbgijnwgmzhrfs2jml5sl09zv73dkai11844chrlfshgv6as82s"; depends=[]; }; + gap = derive2 { name="gap"; version="1.2.2"; sha256="0d5qcmf1lvipf28v3pdcn9prmm8idbcbsxjn54h2na0v6wmsarlw"; depends=[]; }; gap_datasets = derive2 { name="gap.datasets"; version="0.0.4"; sha256="1zlxm3nh1b1mqb94fq2b7sc7v99m9ywz7bz9lz5bhwblk5fzmjii"; depends=[]; }; gapfill = derive2 { name="gapfill"; version="0.9.6"; sha256="0384v7capab7dbyvz6b2jvnh840z6ab3857my0h3cgsys3lhn3c5"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; - gapmap = derive2 { name="gapmap"; version="0.0.4"; sha256="0xz19n0vvdzbfg6afp3y0qfbs3f2nfxib1cyya3cax5wqqfbzw3i"; depends=[ggplot2 reshape2]; }; gapminder = derive2 { name="gapminder"; version="0.3.0"; sha256="067cra1ca4ngwjx8d1y9pyzwcpsfi1wcal0glzyy6ghd1k6jflpv"; depends=[tibble]; }; gargle = derive2 { name="gargle"; version="0.4.0"; sha256="08zhfk2sl342w35i5n2c93ayypg3z0kbl0020l3y9adqka1vazgx"; depends=[fs glue httr jsonlite rlang withr]; }; garray = derive2 { name="garray"; version="1.1.2"; sha256="0s2dgi556x9jnhafvzz4qkxdbq9dm12gsvsqd2g9iy3468fx9flq"; depends=[]; }; - gaselect = derive2 { name="gaselect"; version="1.0.7"; sha256="0bivbvs8yyspqskvka1s1sr6w3k0m5kk4b66wfz9bfdygnywd6wz"; depends=[Rcpp RcppArmadillo]; }; + gaselect = derive2 { name="gaselect"; version="1.0.9"; sha256="089gyllcmq5rgf5yffclifc7rc8rmq4wk1dhznigxkij4zap67hx"; depends=[Rcpp RcppArmadillo]; }; gasfluxes = derive2 { name="gasfluxes"; version="0.4-3"; sha256="017y3d67f22r6pxpjxab634kpdcxjd5mq53h3g45cxic1jz3znym"; depends=[AICcmodavg data_table MASS sfsmisc]; }; gastempt = derive2 { name="gastempt"; version="0.4.4"; sha256="16sgjysc9x6l07jdnw515jzvc8nf237a1a3wmcwc5khyacg29lr4"; depends=[assertthat BH dplyr ggplot2 nlme Rcpp RcppEigen rstan rstantools shiny StanHeaders stringr tibble]; }; - gaston = derive2 { name="gaston"; version="1.5.5"; sha256="0xiy36wrl480lzfcidw5k39arjmwzx4vx5qq8d4qb7ykq25hkjzz"; depends=[Rcpp RcppEigen RcppParallel]; }; + gaston = derive2 { name="gaston"; version="1.5.6"; sha256="1bx6iqfjb9lf3vn0z7v8wjv9m7issvqsnymm4qsgl3622s6qz6rg"; depends=[Rcpp RcppEigen RcppParallel]; }; gatepoints = derive2 { name="gatepoints"; version="0.1.3"; sha256="02qxxf4a6rl3l0jdgqxmzxfnqd9lh5i0q2knaxxsiz0nd74c1jg5"; depends=[]; }; gaussDiff = derive2 { name="gaussDiff"; version="1.1"; sha256="0fqjdxp2ibbami75ba16d02dz4rz5sk8mni45di9anydx44g9d45"; depends=[]; }; - gausscov = derive2 { name="gausscov"; version="0.0.2"; sha256="1a0m7br0yrj8k30rhqxq63jr6vdqhr6n983l34d1c9snspiyqxck"; depends=[]; }; + gausscov = derive2 { name="gausscov"; version="0.0.3"; sha256="012fjyx2gfkab1pfpwrpah81v21rdvj0adnihy150c7y9r773bzz"; depends=[]; }; gaussfacts = derive2 { name="gaussfacts"; version="0.0.2"; sha256="095x7k7m7sy1gqkbm6wiqn26252dclz62sbnkv6cjvmbdxajl7m9"; depends=[]; }; gaussquad = derive2 { name="gaussquad"; version="1.0-2"; sha256="0bcvkssmwwngcd4cnv924n9h3c8z1w3x9c9bkwn5jbz9zyv1lfms"; depends=[orthopolynom polynom]; }; - gazepath = derive2 { name="gazepath"; version="1.2"; sha256="0h5a9bpgx268yh0zy3y4xfvij1ncx92x5qphjc94xmzbrl0br1mf"; depends=[jpeg scales SDMTools shiny zoo]; }; + gazepath = derive2 { name="gazepath"; version="1.3"; sha256="1sv0vdwzmvpnj2k8lphnf4y12fi5md0j2725fjkv1n7a3dkd6faa"; depends=[jpeg scales shiny sp zoo]; }; gb = derive2 { name="gb"; version="2.3.3"; sha256="0gkdkbwr168vi7lgccla49l43rkmjcfrwlqdr65mg5syzcxrh7nh"; depends=[boot KernSmooth]; }; gbRd = derive2 { name="gbRd"; version="0.4-11"; sha256="06x97rw5i6v6cgjxkfhxnw4dn7lghn5q6ra7ri5ag1x9dkfzcl82"; depends=[]; }; - gbfs = derive2 { name="gbfs"; version="1.3.1"; sha256="0kw884fziiczdlvwxrmrxbpikiyglwfa6sf7xqqp4x5vwfrjqmn5"; depends=[curl dplyr httr jsonlite lubridate purrr readr stringr]; }; + gbfs = derive2 { name="gbfs"; version="1.3.2"; sha256="1sgs026bhap2kyla4s7dq9vgxk0daxs3ggixfhin1jqvriqx2b18"; depends=[curl dplyr httr jsonlite lubridate purrr readr stringr]; }; gbm = derive2 { name="gbm"; version="2.1.5"; sha256="0vs6ljaqhwwpgr8wlbhmm4v147rd82kl16rpaijqiylxcc8dxyq6"; depends=[gridExtra lattice survival]; }; gbm2sas = derive2 { name="gbm2sas"; version="2.1"; sha256="0ssjlv849vssmncn01ccpp2myqib5f3g88g0d4rqma2z0ivdpk23"; depends=[gbm]; }; gbp = derive2 { name="gbp"; version="0.1.0.4"; sha256="0awg724gsfwlb0fjcvw0450qdsk4m8x8is16pj5c8fx6nc8rn8bv"; depends=[data_table magrittr Rcpp RcppArmadillo rgl]; }; @@ -8082,30 +8091,30 @@ in with self; { gcerisk = derive2 { name="gcerisk"; version="19.05.24"; sha256="1dn3x9afb6lwys5adi621s6357s66lsif5zv64ilxmckmy2j71zl"; depends=[cmprsk ggplot2 survival]; }; gcite = derive2 { name="gcite"; version="0.10.1"; sha256="0ljgzzl4yy1in5iz42iqkrsq6da4qx838anwdlvbdy96dyafl4ad"; depends=[data_table httr pbapply rvest tm wordcloud xml2]; }; gclus = derive2 { name="gclus"; version="1.3.2"; sha256="1cz0g0i972955hhaji30rx8448x7f3as7z1sww9i5h86ybgirilw"; depends=[cluster]; }; - gcmr = derive2 { name="gcmr"; version="1.0.1"; sha256="093j1cmfw83rck00lx2ns7sfaya7kfc8k7af0q80az7w2g9hmmpv"; depends=[betareg car Formula geoR lmtest nlme sandwich sp]; }; + gcmr = derive2 { name="gcmr"; version="1.0.2"; sha256="0mh542na2byb4aha548lfkzllfnk4rmzcm23jm6642pndvxpnfmj"; depends=[betareg car Formula lmtest nlme sandwich sp]; }; gconcord = derive2 { name="gconcord"; version="0.41"; sha256="1n3pfwk6vip19q1zhbz1n164f9vi7mig8pcd07c4wxnm5ir9dagy"; depends=[]; }; gcookbook = derive2 { name="gcookbook"; version="2.0"; sha256="11g1q187l4j31b6cdzdx5z3s14z3s09l7ynl36pzzn9j19l8cmrc"; depends=[]; }; gdalUtilities = derive2 { name="gdalUtilities"; version="1.0.0"; sha256="1z452lh1n65g78dqynnwq3rcrmm7g4jz7qr25px7qav0zi6944mf"; depends=[raster sf]; }; - gdalUtils = derive2 { name="gdalUtils"; version="2.0.3"; sha256="00q9lcwm1nr2j31wyk567vy89ifhgh0lxv8h869x4k0r6xlqxp7i"; depends=[foreach R_utils raster rgdal sp]; }; - gdalcubes = derive2 { name="gdalcubes"; version="0.2.3"; sha256="04wxy0w1sh1d64995m0b1ss9ly7n2dz7vdgmxgrdn07w7vhbhacx"; depends=[jsonlite ncdf4 Rcpp RcppProgress]; }; + gdalUtils = derive2 { name="gdalUtils"; version="2.0.3.2"; sha256="0krapdy50nd5dvcdflz39dzxpig3zklng3hgxavqg2nvwazalvsc"; depends=[foreach R_utils raster rgdal sp]; }; + gdalcubes = derive2 { name="gdalcubes"; version="0.2.4"; sha256="1xsii3aj11q96xw1zkdri5crynd1g8d499qa74p2c75wqp296mrh"; depends=[jsonlite ncdf4 Rcpp RcppProgress]; }; gdata = derive2 { name="gdata"; version="2.18.0"; sha256="0zwdj7lscgxr8r62ii8hbdh4mb7sa9w4f5nv32zzrxdvymcpya2b"; depends=[gtools]; }; gdimap = derive2 { name="gdimap"; version="0.1-9"; sha256="0ksbpcy739bvsiwis0pzd03zb4cvbd8d5wdf8whfn9k6mkj4x9rs"; depends=[abind colorspace geometry gridExtra gsl movMF oro_nifti rgl]; }; - gdistance = derive2 { name="gdistance"; version="1.2-2"; sha256="0lqpxsg01ibkaq50qyccdhsl2sbb4kh9bcfifs1yzsg45bq27jf8"; depends=[igraph Matrix raster sp]; }; - gdm = derive2 { name="gdm"; version="1.3.11"; sha256="1bsy8fjzc0034hxw5n4ip4lkwr38fiyvw9q21bk17sxn44cnnxz4"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; }; + gdistance = derive2 { name="gdistance"; version="1.3-1"; sha256="04v86kdpag3dvp4zm4ia9y0g9nxa39ka0nmqyw7rkhkmzfs7m6hf"; depends=[igraph Matrix raster sp]; }; + gdm = derive2 { name="gdm"; version="1.4"; sha256="1nwxp1qcl6b2mvi0xdg014m2r09kkxgkwnhpgj4zhck7q7sjimv8"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; }; gdmp = derive2 { name="gdmp"; version="0.2.0"; sha256="0fy8x9l6swrb78apwq9d9msz2y8dkfd2fkyp1pkmzxwdb85lmcdm"; depends=[]; }; gdns = derive2 { name="gdns"; version="0.3.1"; sha256="1vydl7jacldidzx1hhqang9fw8zar8wy4cgdmr9pbw22ffw2qq7s"; depends=[httr jsonlite stringi]; }; - gdpc = derive2 { name="gdpc"; version="1.1.0"; sha256="1q1c9pypkb8dv6bvgizaca4p43krc52fvlvjz9l6nkpazr1qx33d"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; + gdpc = derive2 { name="gdpc"; version="1.1.1"; sha256="1wdfmsc8g7paj3rj75wcvqcjw92bkgc57nz1wc90y67gh1xvxs1i"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; gds = derive2 { name="gds"; version="0.1.0"; sha256="0kc3l93640x8d6g3pa9gbr7ci5hmryg9i1nqpasgnvb6ixv6azbm"; depends=[]; }; gdtools = derive2 { name="gdtools"; version="0.2.1"; sha256="1aax50wyrs4336zpf247l8wmp4spab2n70msziy1ip4gbjn26wa1"; depends=[Rcpp systemfonts]; }; gdxdt = derive2 { name="gdxdt"; version="0.1.0"; sha256="1yrjixq4srmaiy5iaprix4096yhf3ldyklgjag4kxd3l5acwap4h"; depends=[data_table]; }; - gear = derive2 { name="gear"; version="0.1.4"; sha256="1wa35965fw4ga3p72z9w40pcc3jdc3fl7gdkfbwgakg7vc6f24xq"; depends=[lattice optimx sp]; }; + gear = derive2 { name="gear"; version="0.2.0"; sha256="1mb2brw0gasmvfj5kajlyqfxiw1kg3fy56fqlldss5gbl29y67qr"; depends=[autoimage ggplot2 lattice optimx sp]; }; gee = derive2 { name="gee"; version="4.13-20"; sha256="167pzgnmj4cjc41ykps1mfwi6s7y32zxyycn5z17vn4v0pp4q0ak"; depends=[]; }; gee4 = derive2 { name="gee4"; version="0.1.0.0"; sha256="1vvzb9sc69g292zmh9djd15jgc7falypd5p7mzw6ps7mirpbnicf"; depends=[Formula Rcpp RcppArmadillo]; }; geeM = derive2 { name="geeM"; version="0.10.1"; sha256="1r9zyjv7r7r7avdqi54dvczf971frz8pgrs1a04kan5mh4ls6xpy"; depends=[Matrix]; }; geecure = derive2 { name="geecure"; version="1.0-6"; sha256="0nmnrkfgblv38qvk66bdk8933icr59mayqwljkvmpy59sm6br2k5"; depends=[geepack MASS Matrix survival]; }; geepack = derive2 { name="geepack"; version="1.3-1"; sha256="1pyn50pn18ffnraqjb6ncgh3a70c91wq4xyy8n5bva7153556cc2"; depends=[broom magrittr MASS]; }; geesmv = derive2 { name="geesmv"; version="1.3"; sha256="0gm953z8q5cc1adl3d6vj5djg2inc880zfcdl5gd56fnb5gl6h1w"; depends=[gee MASS matrixcalc nlme]; }; - geex = derive2 { name="geex"; version="1.0.11"; sha256="19qqgr16cd4zsmfgl9ny92ncvf1418ilvhb9h3axw24mkycins61"; depends=[lme4 Matrix numDeriv rootSolve]; }; + geex = derive2 { name="geex"; version="1.0.12"; sha256="0zqfd416wl6inr423xzxrnc0as0yrxfqy7fdjyc39i60kghfqyh3"; depends=[lme4 Matrix numDeriv rootSolve]; }; geigen = derive2 { name="geigen"; version="2.3"; sha256="0blg4w9wjprbax8z6md3285v12ajcjmcrpca52l3kd5qmxlvizy7"; depends=[]; }; geiger = derive2 { name="geiger"; version="2.0.6.4"; sha256="0r5g50lpq2cawh3cirj8g954wy129s6a4wjw78blpcc6kdvi5p4d"; depends=[ape coda colorspace deSolve digest MASS mvtnorm ncbit Rcpp subplex]; }; gelnet = derive2 { name="gelnet"; version="1.2.1"; sha256="10ygdfz9f5xhahlqb2divwvaljhiz8jhsd12wvq0qalx0v1h5j0p"; depends=[]; }; @@ -8118,6 +8127,7 @@ in with self; { genBaRcode = derive2 { name="genBaRcode"; version="1.2.2"; sha256="0ls5xly4rrwjby04015yrs8f072fdg492bk4lj1zr2hy0z4m98jc"; depends=[ape Biostrings dplyr futile_logger future future_apply ggnetwork ggplot2 ggraph ggseqlogo ggtree igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist VennDiagram visNetwork]; }; genBart = derive2 { name="genBart"; version="1.0.1"; sha256="12z5vj41npwawz954zqkjfmg9inh063ilh7m82pn73asrxif0ay3"; depends=[clValid data_table fastcluster ggplot2 gtools limma NMF pca3d psych qusage RColorBrewer reshape2 rmarkdown scales shiny shinydashboard shinyjs statmod stringr VennDiagram]; }; genSurv = derive2 { name="genSurv"; version="1.0.3"; sha256="0k5rfpq603szjb76gxffvsbqcav8182h8zwvg4kar68k72yfw1xs"; depends=[]; }; + genTS = derive2 { name="genTS"; version="0.1.3"; sha256="1ky8h8yzqfkb91ny9z08gr7irzvjqr1b42k89ahcrmk458hjwgqr"; depends=[shiny]; }; genalg = derive2 { name="genalg"; version="0.2.0"; sha256="1wzfamq8k5yhwbdx0wy1w5bks93brj0p890xxc4yqrja4w38ja3s"; depends=[]; }; genasis = derive2 { name="genasis"; version="1.0"; sha256="1r0733cc2hss3f8dp19s1ji55yp72mds7p3x1zvvpiks2r7w712p"; depends=[fitdistrplus Kendall]; }; gencve = derive2 { name="gencve"; version="0.3"; sha256="00wbmaffm7mbfv3zl6mb24w1df1a8p24girwdh3a522lw3045iwf"; depends=[C50 class e1071 glmnet lars MASS nnet plus randomForest rpart]; }; @@ -8131,11 +8141,12 @@ in with self; { geneSignatureFinder = derive2 { name="geneSignatureFinder"; version="2014.02.17"; sha256="1s9jj87wnzzgm9hnws09yhrxdlb6jw56i3ddwznvmh8vpzrspv4h"; depends=[class cluster survival]; }; genemodel = derive2 { name="genemodel"; version="1.1.0"; sha256="1x6n6k9ifv2swhyrghvm6fsz5vh85cdik8225175i9msvmkh928n"; depends=[stringr]; }; genepi = derive2 { name="genepi"; version="1.0.1"; sha256="1whhdlq9p8gmygv7464hvfz6dhm65gqq1dqls6hgpmw822zxgbd5"; depends=[]; }; - genepop = derive2 { name="genepop"; version="1.1.4"; sha256="1i7pifh7dyz3vr7138hxcsfixz8y5q5g503gcairvrisf7ggj9fr"; depends=[Rcpp RcppProgress stringr]; }; + genepop = derive2 { name="genepop"; version="1.1.7"; sha256="0b36nspq3kkad52k0viw1pdsf7h9h5ivi0ix7zg8i0z7vkhnm0cy"; depends=[Rcpp RcppProgress stringr]; }; generalCorr = derive2 { name="generalCorr"; version="1.1.5"; sha256="1kjmg9paxhpd6csia69k169qgm8s388iysrjnm4bqv9zxn21zwwg"; depends=[lattice meboot np psych xtable]; }; generalhoslem = derive2 { name="generalhoslem"; version="1.3.4"; sha256="0fmfhmdb16gf3v9h50vif4f3f6bm03qq7wplnmzyxa80jb60fcc0"; depends=[MASS reshape]; }; generator = derive2 { name="generator"; version="0.1.0"; sha256="0xjvnmnpdms8rrxxcz6pd8w4rnbv3ghzqv4m63zxia2l98x7z4rf"; depends=[]; }; generics = derive2 { name="generics"; version="0.0.2"; sha256="0xk1xhpy7gpv3pvaygzhpfdxj72zmb38pb4nscfyg2ff36vx3cvi"; depends=[]; }; + genero = derive2 { name="genero"; version="0.1.0"; sha256="0akwwy5xbh7s40v8dr1zr7jfglv0iyh4zn0sb0rnz4r57qr6nh8w"; depends=[]; }; genesysr = derive2 { name="genesysr"; version="1.0.0"; sha256="05jp8z7313r5wi9a5yw7fh198l7nd2ywzwg4f23yp4kfrkkgawn5"; depends=[dplyr httr jsonlite]; }; genetics = derive2 { name="genetics"; version="1.3.8.1.2"; sha256="1v0ylnia6c44v356dsmnkx6054vcxazpzsrdh3yph5ch5vg6gjrh"; depends=[combinat gdata gtools MASS mvtnorm]; }; genie = derive2 { name="genie"; version="1.0.4"; sha256="0ymrn42ik0rfildmyq4z0gsd7injda0dsjgx69nqb6hq0x8s5hqa"; depends=[Rcpp]; }; @@ -8154,61 +8165,58 @@ in with self; { genotypeR = derive2 { name="genotypeR"; version="0.0.1.8"; sha256="1kwzjn6hrnfizs44cz4a8qa4mdhdzqssc4axx0s6vngmkmsrffig"; depends=[colorspace doBy plyr reshape2 zoo]; }; genpathmox = derive2 { name="genpathmox"; version="0.3"; sha256="0r1iqwm5jh93lbh87ks5qm4qqsp98928vg7qmv1pkahdlvl3ramw"; depends=[diagram mice plspm quantreg]; }; genpwr = derive2 { name="genpwr"; version="1.0.1"; sha256="1vz4pq8rfvw0pbxhm83mbgsrj17ldcssq92b48p6vlpb403jsm91"; depends=[ggplot2 MASS nleqslv]; }; - genridge = derive2 { name="genridge"; version="0.6-6"; sha256="1hqarvd767h2vbjqfjzdr0548hxj87kv1073hfqyq5fybdlzsjx3"; depends=[car]; }; + genridge = derive2 { name="genridge"; version="0.6.7"; sha256="07mdkkq4j8i5x8d4yfsp2rfpf7gkcgdcsw9b2ng5f7gdnblrw0dr"; depends=[car]; }; gensemble = derive2 { name="gensemble"; version="1.0.1"; sha256="03ql1qxrxixr70hs9mwiqw92qyrg9pj4046pb42g435yncw321ad"; depends=[]; }; gensphere = derive2 { name="gensphere"; version="1.1"; sha256="1xzli40fw94n89cv2qyb321csad1w9zidqc226wlifl2m44cw6f7"; depends=[geometry mvmesh rgl SimplicialCubature SphericalCubature]; }; gensvm = derive2 { name="gensvm"; version="0.1.3"; sha256="1r9vd6h3divmjd73p3541mngv452v1dkxc41q7mbkd5qhy34km74"; depends=[]; }; genvar = derive2 { name="genvar"; version="0.0.2.0"; sha256="1agkyq84kl64q77n5sml44ind16c1zf16ivr6c7n08746gra3mbc"; depends=[clubSandwich foreign Formula plm readstata13 rlang sandwich]; }; geoBayes = derive2 { name="geoBayes"; version="0.6.3"; sha256="153a7kp73wxm5hzzq038p3mnykhakv0c9qa8fpbjijccmbi89970"; depends=[coda optimr sp]; }; - geoCount = derive2 { name="geoCount"; version="1.150120"; sha256="1kcjqls91r6p8ykn901c5p3v2lzbyainahhjpnr5c3a57v8s73ms"; depends=[Rcpp RcppArmadillo]; }; geoGAM = derive2 { name="geoGAM"; version="0.1-2"; sha256="0q09pk2npn4hjymklwfrhz2ybmjpcb6kvqkpn9l3a6cdjgk6bkmj"; depends=[grpreg MASS mboost mgcv]; }; - geoR = derive2 { name="geoR"; version="1.7-5.2.2"; sha256="0ynns6961sbylmqyy1lq0l000gab9kq5pz9ciffj0spdw8s91sxc"; depends=[MASS RandomFields sp splancs]; }; - geoRglm = derive2 { name="geoRglm"; version="0.9-11"; sha256="0qf3nm0snrmplbwgcac0iinni7h2wqm13lm34zzfl00idzv0k9b9"; depends=[geoR sp]; }; - geoSpectral = derive2 { name="geoSpectral"; version="0.17.4"; sha256="0i2k5k66gmf7zvipcd0a489rnpj14j4a4xw9k5dccpj6ybwd47l7"; depends=[dplyr leaflet maps plotly rbokeh rgdal sp spacetime xts]; }; + geoR = derive2 { name="geoR"; version="1.8-1"; sha256="1lvgkpvv4a05lsb1dgphpv733lxbpcj7p2bj1yjjbfch8n04f1lr"; depends=[MASS RandomFields sp splancs]; }; + geoSpectral = derive2 { name="geoSpectral"; version="0.17.5"; sha256="0bw8mv1kq27hql37zcalz3zjj57bhs7g724wfpvzav2rlzvs8n7f"; depends=[dplyr leaflet maps plotly rbokeh rgdal sp spacetime xts]; }; + geoTS = derive2 { name="geoTS"; version="0.1.3"; sha256="12v50r2ym3nb21sskq7h4xsk6nzci06l9iync2ny91iwl7c9nrjc"; depends=[doParallel ff foreach iterators raster sp]; }; geoaxe = derive2 { name="geoaxe"; version="0.1.0"; sha256="043y7kb24hp66j7pnpqsdixvdmppwp72y8i4f8q7xrkhaqlfb93v"; depends=[jsonlite rgeos sp]; }; - geobr = derive2 { name="geobr"; version="1.1"; sha256="1j6g62c4nrjqgvk0yk8b9p52p7a7czwkzly1ld0svvh1hz3yv93x"; depends=[httr readr sf]; }; - geodetector = derive2 { name="geodetector"; version="1.0-3"; sha256="1x6mr05976vdxxgcb4fd3v7mq2lanrl44nqz6f6rk2dy3yhdqi5c"; depends=[maptools rgdal rgeos sp]; }; + geobr = derive2 { name="geobr"; version="1.2"; sha256="1h65bn98dl7fc4v0y8dc9g6xrxfsmfra2sc6b5vhqpnkd2ism39q"; depends=[httr readr sf]; }; + geocacheR = derive2 { name="geocacheR"; version="0.1.0"; sha256="04ckxmird6n179xvsx50cjdz046igjxxqdnz5pfxi8pdklnky20c"; depends=[dplyr magrittr stringr threewords tibble]; }; geodist = derive2 { name="geodist"; version="0.0.3"; sha256="1qxrbpx265l5vwvicspbqzr2s0k3k6lsrzvxnbhnds95jgq9yw4q"; depends=[]; }; + geodiv = derive2 { name="geodiv"; version="0.1.1"; sha256="0vww273947isk9ds6hjg9k47k8kbsbgyjap6iqgqyd9bl9437yrm"; depends=[dplyr e1071 phonTools pracma raster Rcpp RcppArmadillo rgdal rgeos sf sp spatial tibble zoo]; }; geoelectrics = derive2 { name="geoelectrics"; version="0.2.0"; sha256="1dmpaf16750ni4yr36cglfz9pv9jax8jxb3kwn47kxgnx3l8qq98"; depends=[fields lattice rgl]; }; geofacet = derive2 { name="geofacet"; version="0.1.10"; sha256="07viqfm8h469zjmpk4vp6zxmvwdcsn2wi0j8plyx1nirmxl7s0mw"; depends=[geogrid ggplot2 ggrepel gridExtra gtable imguR rnaturalearth sp]; }; - geofd = derive2 { name="geofd"; version="1.0"; sha256="16312g9mgw52mpsfky1j20zcqkkv91ihl0xhvv1bl80diffzf0zi"; depends=[fda geoR]; }; + geofd = derive2 { name="geofd"; version="2.0"; sha256="1rsgy4nxfp1gi4vwh8zfzksr6sr2ga31kmd56q5m56gw530570ra"; depends=[fda]; }; geogrid = derive2 { name="geogrid"; version="0.1.1"; sha256="0b8afwgj9x56z6zh525y7qkiwbv77mjcw3v19kfba0426jn4vi87"; depends=[Rcpp RcppArmadillo rgeos sf sp]; }; geohashTools = derive2 { name="geohashTools"; version="0.3.0"; sha256="0lc5ib6iylbxn02bl72sh3b6j51zm3b1rnjrj5jdyjj22hm7n7sa"; depends=[]; }; geojson = derive2 { name="geojson"; version="0.3.2"; sha256="0iqf8jkqgl97a07v8ixr2pbvamwyjswqckdwl3kkxgx7bycndprv"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; }; - geojsonR = derive2 { name="geojsonR"; version="1.0.7"; sha256="11d6rn7z2i8x4j3myzk9gkaw6y5asi92ya9lxc9cn1zv8jlsamvr"; depends=[R6 Rcpp RcppArmadillo]; }; - geojsonio = derive2 { name="geojsonio"; version="0.8.0"; sha256="00gh6wq1gxnvcx5fswmjc2qxw3jjcc5kf4gdrqn7lv1lip9qm3m1"; depends=[geojson httr jqr jsonlite magrittr maptools readr rgdal rgeos sf sp V8]; }; - geojsonlint = derive2 { name="geojsonlint"; version="0.3.0"; sha256="1ww52fg80mqwpn9rxz7qy698djjgzngp3fdhhhvixfrzl0ha810r"; depends=[crul jsonlite jsonvalidate V8]; }; - geojsonsf = derive2 { name="geojsonsf"; version="1.3.0"; sha256="1wr3g4rcvv7wh0gjw5mic3msz7wgcg6ra3zai5kxbv3wq2i9hfcg"; depends=[BH curl jsonify rapidjsonr Rcpp]; }; + geojsonR = derive2 { name="geojsonR"; version="1.0.8"; sha256="015g1xpvbwgng5vh79q8gx6900skv3p7s2v3xbka08qllvsg5by1"; depends=[R6 Rcpp RcppArmadillo]; }; + geojsonio = derive2 { name="geojsonio"; version="0.9.0"; sha256="0w0qfag64js72qbm15gapgrh6xlh87dzwf0qs9gcrrlr69r5kvk1"; depends=[crul geojson jqr jsonlite magrittr maptools readr rgeos sf sp V8]; }; + geojsonlint = derive2 { name="geojsonlint"; version="0.4.0"; sha256="0l6xlf6l9shyvdd2ghkhcgbkxpmycapfpxakzbvd92j1x8dmr9az"; depends=[crul jsonlite jsonvalidate V8]; }; + geojsonsf = derive2 { name="geojsonsf"; version="1.3.3"; sha256="0a1ij0nq5d4cvrmqs0mpnc2a1c4h9ms29yln9iay9qi5c5pjdd1k"; depends=[curl jsonify rapidjsonr Rcpp sfheaders]; }; geoknife = derive2 { name="geoknife"; version="1.6.3"; sha256="092in9wihgijhbkawzjqwfyazz22n4sc06x2gj14yvmp63x5dj36"; depends=[curl httr progress sp whisker xml2]; }; geomapdata = derive2 { name="geomapdata"; version="1.0-4"; sha256="1g89msnav87kim32xxbayqcx1v4439x4fsmc8xhlvq4jwlhd5xxw"; depends=[]; }; geomedb = derive2 { name="geomedb"; version="2.0.0"; sha256="1lrxhgrrx12irbk9rlvyqcvzhw842c4hp9mqw7gzqcldhpc40isd"; depends=[ape data_table httr jsonlite]; }; geomerge = derive2 { name="geomerge"; version="0.3.1"; sha256="0pvyhpv4vq8mvvlybxhviq8rbazw29dgf9m0xnldaxg9r6lqdp4d"; depends=[geosphere ggplot2 gridExtra inlmisc lubridate raster scales sp spdep]; }; geometa = derive2 { name="geometa"; version="0.6-1"; sha256="0q06vj2r8xyiwrkrzixv0ymvwvznk2a6i2sdmykwyzm7vw7phwkw"; depends=[httr jsonlite R6 XML]; }; - geometr = derive2 { name="geometr"; version="0.1.1"; sha256="0bh8m76273vk2hnn2d4fbr9a89av0f8fnww9lfa1v392i56zfi2z"; depends=[checkmate crayon deldir dplyr raster Rcpp rgdal rlang sf sp spatstat tibble]; }; geometry = derive2 { name="geometry"; version="0.4.5"; sha256="1n10l8ax3783v3lgaacb15qsn8b3f0wpmhg3k39j31s6ciyd3vcg"; depends=[linprog lpSolve magic Rcpp RcppProgress]; }; - geomnet = derive2 { name="geomnet"; version="0.2.0"; sha256="0xanzx8p34bac4zcf9j69nivwhllvsrw7x70mzgl95jhg3gvv96a"; depends=[dplyr ggplot2 network plotly readr sna tidyr]; }; - geomorph = derive2 { name="geomorph"; version="3.2.0"; sha256="0i9i9xcpiqfsh1gk8xar46q6bqv5vkv8kxshxq26wgpyysnls88a"; depends=[ape jpeg rgl RRPP]; }; + geomorph = derive2 { name="geomorph"; version="3.2.1"; sha256="0cndp449szvkmmm0lvz4dggg3xym6xycvx9iyhmmvmpm3qhpjlfg"; depends=[ape jpeg rgl RRPP]; }; geonames = derive2 { name="geonames"; version="0.999"; sha256="0yz1b7y3vwa4izrhpry4n3iwzb7y67s5p3kgnd7d29cl5pcbpmqx"; depends=[rjson]; }; geonapi = derive2 { name="geonapi"; version="0.3-1"; sha256="137g89qbwayd3iw4hfy85a40c8wyyhqd2qsrbqr6j5x155q39wlf"; depends=[geometa httr openssl R6 XML]; }; geonetwork = derive2 { name="geonetwork"; version="0.3"; sha256="0qjnv91rcxzw44fmbgm4qpcrbj5qgz1lgmyw53imyhxgyv55awxv"; depends=[geosphere igraph rgdal sf sp]; }; geoops = derive2 { name="geoops"; version="0.2.0"; sha256="0n9n0j849jbqv6y6lqhyhddr5zfz8i9yi03gpg9862nzkvxd3c4k"; depends=[Rcpp]; }; - geoparser = derive2 { name="geoparser"; version="0.1.2"; sha256="0vca4ijybqgk5dmbk0af4ykvbdkny8dm9d4frh5ikzk28hkvnlik"; depends=[digest dplyr httr jsonlite lazyeval purrr stringr tidyr]; }; geophys = derive2 { name="geophys"; version="1.4-1"; sha256="1s64sbr0chv0z2vaw059khfkv8iga1kr6428kkglgafq5x2d6h3q"; depends=[cluster GEOmap RFOC RPMG RSEIS]; }; - georob = derive2 { name="georob"; version="0.3-11"; sha256="1rl1wyr9splx58a1y8vgi2gmy9y6ngm4lydwbkp0fk77wiyv9s26"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; + georob = derive2 { name="georob"; version="0.3-12"; sha256="1a67p2xbc8zhr9pgp3k224af8gjf5xvxfg81471mic9cfcs6j1qw"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; geosample = derive2 { name="geosample"; version="0.2.1"; sha256="1gpzrsza8ys2jdazb2ixc70y1w5lrkahlmvws1i071zby1la01iy"; depends=[pdist sf sp splancs]; }; geosapi = derive2 { name="geosapi"; version="0.4-1"; sha256="00c2566r50v4vgqzjvghf4spyfqqxnwkhxj38ivym3l8b0d5fd2x"; depends=[httr openssl R6 XML]; }; geoscale = derive2 { name="geoscale"; version="2.0"; sha256="0gisds0in32xhw54fxfyxvwxgrfjs871wmqf6l915nr896rlx0bm"; depends=[]; }; geosed = derive2 { name="geosed"; version="0.1.1"; sha256="07j4q6sgrf83h2gi2j5qap5rifz8gimdacd3b7ld1p3b6ai6kv3r"; depends=[]; }; - geospacom = derive2 { name="geospacom"; version="0.5-8"; sha256="14qyjbq0n43c2zr9gp11gdqgarvmicx3gpq2ql2vjfzrmirxwjgg"; depends=[classInt geosphere maptools rgeos sp]; }; - geospark = derive2 { name="geospark"; version="0.2.1"; sha256="0r5zf80lb5jmqjahv7iszz8kr0983bwnb3cgrm78fg9fs3sv1sjn"; depends=[dbplyr dplyr sparklyr]; }; + geospark = derive2 { name="geospark"; version="0.3.1"; sha256="004axa0k9xg1hra8jihwgnc379k8pib1h0zkr82j0m9sii4wrk6r"; depends=[dbplyr dplyr sparklyr]; }; geosphere = derive2 { name="geosphere"; version="1.5-10"; sha256="15xlgsmn0vwky1l13n6acdz6jn2b2na3gf6x367y3qh1f5w4zkan"; depends=[sp]; }; geospt = derive2 { name="geospt"; version="1.0-2"; sha256="1814nn0naxvbn0bqfndpmizjbqcs6rm87g2s378axkn6qpii4bh8"; depends=[fields genalg gsl gstat limSolve MASS minqa plyr sgeostat sp TeachingDemos]; }; geosptdb = derive2 { name="geosptdb"; version="0.5-0"; sha256="0m0dlazhq2za71mi3q8mz2zvz7yrmda7lha02kh9n820bx89v33z"; depends=[FD fields geospt gsl limSolve minqa sp StatMatch]; }; - geostatsp = derive2 { name="geostatsp"; version="1.7.8"; sha256="1wjjwy365c6wlsxv9l50ph6drzmsyl0mkad36zrgzl9arxhnbkwx"; depends=[abind Matrix numDeriv raster sp]; }; + geostatsp = derive2 { name="geostatsp"; version="1.8.0"; sha256="0vn5zklrw3ds440babgzdm2k8z7pvdqsbwwwcg94d6l188v9mgd3"; depends=[abind Matrix numDeriv raster sp]; }; geotech = derive2 { name="geotech"; version="1.0"; sha256="18s7w6h1svc4n1hcgj5njfkf3nflkc53cdwsq5112p3442rlz33f"; depends=[]; }; geotools = derive2 { name="geotools"; version="0.1"; sha256="0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd"; depends=[]; }; - geotoolsR = derive2 { name="geotoolsR"; version="1.0"; sha256="1arbyb1q96ya3smn9sqzqji5v21x37iyyxmvlmqmjj75an8ix5dp"; depends=[dplyr geoR ggplot2 tidyr]; }; - geotopbricks = derive2 { name="geotopbricks"; version="1.5.3"; sha256="06mi13gzilp844bramrly9ar52vs3747m3236g0bwjy3b7gqdq9c"; depends=[raster rgdal stringr zoo]; }; + geotoolsR = derive2 { name="geotoolsR"; version="1.1"; sha256="162s37j7wh14h91b6acn453bvgpk3cakfi7mgrdvr5bjdqqn7j7v"; depends=[dplyr geoR ggplot2 tidyr]; }; + geotopbricks = derive2 { name="geotopbricks"; version="1.5.4"; sha256="1mn15mchxkv9qqjrcsyx0pf56sdz0ba7i5jd1ci1ilr6rig81ckz"; depends=[raster rgdal stringr zoo]; }; + geouy = derive2 { name="geouy"; version="0.1.8"; sha256="1ppwix7fr3vssy39073607ngjdfx6hxvx10lskhdpwj9mkpaym3v"; depends=[dplyr fs ggplot2 ggsn ggthemes glue raster rgdal rlang sf sp stringr xml2]; }; geoviz = derive2 { name="geoviz"; version="0.2.2"; sha256="1wx1p72532xpg6y3rlrvaiwx57xad3d9fvy9mbadvj418xwxnmim"; depends=[abind chron curl dplyr ggplot2 glue magrittr png progress purrr raster readr rgdal rgeos rgl rlang sf slippymath sp stringr tibble tidyr]; }; geozoning = derive2 { name="geozoning"; version="1.0.0"; sha256="0cqdi2jgqrxc339qkr57dp11jp40x99f9inwamnh7ymg2q7kq14s"; depends=[deldir fields ggplot2 gstat maptools RandomFields raster rgeos sp]; }; geozoo = derive2 { name="geozoo"; version="0.5.1"; sha256="0g91yhg7zw1bp0lxxblr2irckjg2rl4pg1vgglccnmxkzn0ji2qi"; depends=[bitops]; }; @@ -8218,7 +8226,7 @@ in with self; { gert = derive2 { name="gert"; version="0.3"; sha256="0caxjcdc2karsxasivkh5sasjkzlif25pw0whdjyq6zh3bvmdlkp"; depends=[askpass credentials openssl]; }; gesca = derive2 { name="gesca"; version="1.0.4"; sha256="1ndn8wgp22pr017x6v7jw8jy4gd06x8110qa860hw8i6pn47wfwv"; depends=[]; }; gestalt = derive2 { name="gestalt"; version="0.1.8"; sha256="1cb04rd3yvkd47byynrn0pq6brlsi2z2iavh4gfrwmqyvks34k51"; depends=[rlang]; }; - gestate = derive2 { name="gestate"; version="1.3.2"; sha256="1fr811f4d7zc75wxdrasd91wsa5ngzzb0p73ycy6lfwpm839i28q"; depends=[doParallel foreach shiny shinythemes survival survRM2]; }; + gestate = derive2 { name="gestate"; version="1.4.0"; sha256="1ybwi1733w8z97sdj38l66mb8ynhqhl68ijns6rvwqxphac6v5x8"; depends=[doParallel foreach shiny shinythemes survival]; }; getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.3.1"; sha256="1961w8vpgamna5a9m367mc9szl3vlv8wgmbhfjc0yxp818p07g3a"; depends=[curl data_table hoardr raster tibble]; }; getMet = derive2 { name="getMet"; version="0.3.2"; sha256="0j1h1vy8rd7czpnb4msdb9k560pnh7kjkmpqqwzwin2ms1c0mggb"; depends=[EcoHydRology jsonlite]; }; getPass = derive2 { name="getPass"; version="0.2-2"; sha256="03ydafhh0sk3rcnpr3paajyji64x2ddp6p814p9mvbmyrblcgzcc"; depends=[rstudioapi]; }; @@ -8235,7 +8243,7 @@ in with self; { gfcanalysis = derive2 { name="gfcanalysis"; version="1.5.0"; sha256="1cg34c4hr8kwc23qlv2m6qw2k7ah4w8s70q0hf4hnvp66rw4kaqh"; depends=[animation geosphere ggplot2 plyr raster rasterVis RCurl rgdal rgeos sp stringr]; }; gfer = derive2 { name="gfer"; version="0.1.10"; sha256="1y0ra8k7zka43ibiii16vbwnc3m1i77yc9zj8rhzhmvhajjwad3l"; depends=[circlize data_table ggplot2 ggrepel googlesheets gsheet httr jsonlite rvest scatterpie stringi tidyr V8 xml2]; }; gfmR = derive2 { name="gfmR"; version="1.1-0"; sha256="0qzzbcra1fnbp0h31b1as20yhmqmi7p62xrhikj64an9avg9b277"; depends=[faraway nnet]; }; - gfoRmula = derive2 { name="gfoRmula"; version="0.2.1"; sha256="0hqjpav6zaxgk5mwx72qphcpc4gvm2072kl15419arr6aqf79kkq"; depends=[data_table ggplot2 ggpubr nnet stringr survival truncnorm truncreg]; }; + gfoRmula = derive2 { name="gfoRmula"; version="0.3.0"; sha256="04qlshpg5h4x8w2xbhndc71n18k35mkf31mcjzcc6qwgiliyz35r"; depends=[data_table ggplot2 ggpubr nnet progress stringr survival truncnorm truncreg]; }; gg_gap = derive2 { name="gg.gap"; version="1.3"; sha256="0m66050ryn31xmsmmikjsssllasvjdmp9yjbwfdwfpwdv106zn9h"; depends=[cowplot ggplot2]; }; ggBubbles = derive2 { name="ggBubbles"; version="0.1.4"; sha256="116rl8j0s9xwhh9jl5yj9fspkhv2zrirbx9247hhns9ngrdn4i3x"; depends=[dplyr ggplot2]; }; ggChernoff = derive2 { name="ggChernoff"; version="0.2.0"; sha256="09bh9isvx3hwwvg72fv6z3fvp8dimpbhvbp328z8amq8jjhph4vf"; depends=[ggplot2 scales]; }; @@ -8253,29 +8261,30 @@ in with self; { ggalluvial = derive2 { name="ggalluvial"; version="0.11.1"; sha256="05c59w9rmp59ajw8ybr155c9xfxzlgc76xcnxh3890nh7nn7h0m1"; depends=[dplyr ggplot2 lazyeval rlang tidyr tidyselect]; }; ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; }; ggamma = derive2 { name="ggamma"; version="1.0.1"; sha256="1zc4p2bz4pxqycrzgb9wwl53lxqcikxsihna6ff8pmw1n623j85z"; depends=[]; }; - gganimate = derive2 { name="gganimate"; version="1.0.4"; sha256="0z25fanxakc4vh67dnx99iygkxkpv8rjh9vlyypbwgy6rrg2mvpc"; depends=[ggplot2 glue plyr progress rlang scales stringi tweenr]; }; + gganimate = derive2 { name="gganimate"; version="1.0.5"; sha256="0kvz9gm56zz61bq7sky0m9mrlk8awjx0xm3yw9dawz1vw4a5fr3x"; depends=[ggplot2 glue plyr progress rlang scales stringi tweenr]; }; ggasym = derive2 { name="ggasym"; version="0.1.2"; sha256="1nhsiamiv8dwn5cb2l7z7dzy46x6qcygxr2ncp0nqp6rnl7mh712"; depends=[broom corrr dplyr ggplot2 magrittr purrr rlang scales stringr tibble tidyr]; }; ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.6.0"; sha256="0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v"; depends=[beeswarm ggplot2 vipor]; }; ggbuildr = derive2 { name="ggbuildr"; version="0.1.0"; sha256="0pld635v6fv46ky7s4icwxlcnr7z6bp5ikf20adpkljwhy0wwxak"; depends=[ggplot2 purrr readr]; }; ggconf = derive2 { name="ggconf"; version="0.1.3"; sha256="0g4xasqhdiqfqahakv6p5npl56f2iakx4bnc9v9zcjr077kdda4n"; depends=[ggplot2 rly]; }; ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.3"; sha256="0hi9lz121ya1l2lbm7rqlxg6fs6bvxck396dngnidrhl5fvqb41b"; depends=[ggplot2 reshape2]; }; - ggdag = derive2 { name="ggdag"; version="0.2.1"; sha256="0cqshv72fd188z58k0df67i52x4ss764x28x7xn2m9f7cypnqw38"; depends=[dagitty dplyr forcats ggforce ggplot2 ggraph ggrepel igraph magrittr pillar plyr purrr stringr tibble tidygraph]; }; + ggdag = derive2 { name="ggdag"; version="0.2.2"; sha256="0gv7gf2bbrd0m1hjvk6j39ckyvxn5lj749q4fzlzzc5mxr3qdfyz"; depends=[dagitty dplyr forcats ggplot2 ggraph ggrepel igraph magrittr pillar purrr stringr tibble tidygraph]; }; ggdark = derive2 { name="ggdark"; version="0.2.1"; sha256="1w93g2j4g45x9s841v9zi18lxzda81ipa13fajqc6p9xk8frvgrf"; depends=[ggplot2]; }; ggdemetra = derive2 { name="ggdemetra"; version="0.2.1"; sha256="1d5adnamv2gnnj3q8779brl827d2zbqpkgfz2r097jndy5ng1021"; depends=[ggplot2 ggrepel gridExtra RJDemetra]; }; ggdendro = derive2 { name="ggdendro"; version="0.1-20"; sha256="1zzq1hxd0d1qa5hrzwfkdw6fzscpcafbwbpkrb62dm559y8awp0j"; depends=[ggplot2 MASS]; }; ggdistribute = derive2 { name="ggdistribute"; version="1.0.3"; sha256="07bsnfp1chf52gprw7g5kyqf6l6yzmnlv13x9dj1wa6rjwq1342i"; depends=[data_table dplyr ggplot2 magrittr tibble]; }; ggdmc = derive2 { name="ggdmc"; version="0.2.6.0"; sha256="1gncv7npl548k3zd41x2gwg5qywn5rp6zb4i7ga78sy77mvi3x92"; depends=[coda data_table ggplot2 matrixStats Rcpp RcppArmadillo]; }; gge = derive2 { name="gge"; version="1.4"; sha256="0plwk5j2n0309ghgn8r4ws3azwn7n4jb7yfykiiwwalhs3k05lsa"; depends=[nipals reshape2 rgl]; }; + ggeasy = derive2 { name="ggeasy"; version="0.1.1"; sha256="0iy9557bl5gci4d416w4qj719lb5kps653lsckl2h5ss1842axlk"; depends=[ggplot2 rlang]; }; ggedit = derive2 { name="ggedit"; version="0.3.0"; sha256="1v9apfkm47jcqyhjrvv8ig09gz6zsss5xj5mrckfjybd5ca08rzn"; depends=[colourpicker dplyr ggplot2 magrittr miniUI plyr purrr rlang rstudioapi scales shiny shinyAce shinyBS tidyr]; }; - ggeffects = derive2 { name="ggeffects"; version="0.14.0"; sha256="1djz82xww86h8f33m2vm40lliicppgyhm6hyn3h6rzrqjrlrsmdw"; depends=[insight magrittr MASS purrr sjlabelled sjmisc]; }; - ggenealogy = derive2 { name="ggenealogy"; version="1.0.0"; sha256="1wi29f7allky84w9w2512v8gs687gvypsbd7r4vyxs24l6pfssyc"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; + ggeffects = derive2 { name="ggeffects"; version="0.14.2"; sha256="1y3yfb07jrr6vkc8hk6rp52l70dj7042jvqgjzllslzy7hx2jhyw"; depends=[insight MASS sjlabelled]; }; + ggenealogy = derive2 { name="ggenealogy"; version="1.0.1"; sha256="19six9ln1yaqv268abm9qvb61nl8zdz3gghwr8hmwsa94xwhzhkq"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; ggetho = derive2 { name="ggetho"; version="0.3.4"; sha256="05wh0qk5cbcvcfgj5wf12qqbjgl1bbwcxywc16qdby7r4h5wy0gn"; depends=[behavr data_table ggplot2 labeling rlang scales stringr]; }; ggfan = derive2 { name="ggfan"; version="0.1.3"; sha256="1p3hbznpsaznlk0lnjyazc130www0p5919qplg3kspng7qh8p22w"; depends=[colorspace dplyr ggplot2 rstan]; }; ggfittext = derive2 { name="ggfittext"; version="0.8.1"; sha256="1a5k8fba2qjxnpd14vqkakpzcwkzqbpvs8h6fb9zh62y91n6p26v"; depends=[ggplot2 shades stringi]; }; ggfocus = derive2 { name="ggfocus"; version="1.0.0"; sha256="03q0rz7flm8sc8hrlkcm5fz66qiyxb8z8q4bh9dglhw0jc8q1fvb"; depends=[dplyr ggplot2 magrittr RColorBrewer rlang]; }; ggforce = derive2 { name="ggforce"; version="0.3.1"; sha256="04926cqrda6psvy2nzkkw4czwyxdp7fnxg76byp14v12kgd72lm0"; depends=[ggplot2 gtable MASS polyclip Rcpp RcppEigen rlang scales tidyselect tweenr withr]; }; - ggformula = derive2 { name="ggformula"; version="0.9.2"; sha256="16ycabhnp78fsiv1dc63ccgh9gmpsy2683vbmq0fdzl6w3pd87sr"; depends=[ggplot2 ggstance magrittr mosaicCore rlang stringr tibble tidyr]; }; - ggfortify = derive2 { name="ggfortify"; version="0.4.8"; sha256="191q2z7w0l4v7swjlxs2hjgbjngw2838688s7ygnj0kigsm310f3"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; + ggformula = derive2 { name="ggformula"; version="0.9.4"; sha256="04vdhg1bbc1psrx9ggaphz7cx4fw5xsmhkqpqfcg2w4ba2bjy46f"; depends=[ggforce ggplot2 ggstance magrittr mosaicCore rlang stringr tibble]; }; + ggfortify = derive2 { name="ggfortify"; version="0.4.9"; sha256="1p6knrbyaynaqwd939w09hpf1zz1gn95cb46sfgppl8l98krb2h5"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; gggenes = derive2 { name="gggenes"; version="0.4.0"; sha256="13hrjh80rlri8vm736p85v2jwwpck8gc5jfps1qrqcq86kv2xgkn"; depends=[ggfittext ggplot2 rlang]; }; ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; }; gggibbous = derive2 { name="gggibbous"; version="0.1.0"; sha256="1g6igmj2nh4b516p1wcs1cwgzdnawvf3snxzwxjkmdc4yqbzyz24"; depends=[ggplot2 scales]; }; @@ -8289,19 +8298,19 @@ in with self; { ggiraph = derive2 { name="ggiraph"; version="0.7.0"; sha256="1002mf2dp7ram5yrj9qlg9rawz083k130k6bjvdidq0x800ps7b4"; depends=[gdtools ggplot2 htmltools htmlwidgets purrr Rcpp rlang uuid xml2]; }; ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.2.9"; sha256="1qmw7z10h1x6xnlpq7shafg6w2bal8ni02c07fyy9f7hm02xfnzs"; depends=[dplyr ggforce ggiraph ggplot2 magrittr mgcv mycor plyr ppcor purrr RColorBrewer reshape2 scales sjlabelled sjmisc stringr tidyr webshot ztable]; }; ggjoy = derive2 { name="ggjoy"; version="0.4.1"; sha256="012md2m0jqfcccb933j423m3ck31v3p0pd41gjxpyg9082y7ixyj"; depends=[ggplot2 ggridges]; }; - gglasso = derive2 { name="gglasso"; version="1.4"; sha256="0r4zfgkys8104iw1vzww3qid8a6dyn03x0jlgwrdvavfj86yhq54"; depends=[]; }; - gglogo = derive2 { name="gglogo"; version="0.1.4"; sha256="0yqjafak83rjbxydqlkys68yvpakjqhdlh2b4rk94wsb40j5kq4p"; depends=[dplyr ggplot2 jpeg knitr magrittr plyr purrr reshape2]; }; + gglasso = derive2 { name="gglasso"; version="1.5"; sha256="12l0ac1n54z41yw7c00fm6q2mjmhp9blk4f8vp7q2my2xxwh1fmj"; depends=[]; }; + gglogo = derive2 { name="gglogo"; version="0.1.5"; sha256="08wg0svcksdzchp6bdllmsnklxia3d0ygqwzgmqb2sga8nbkf5hl"; depends=[dplyr ggplot2 jpeg knitr magrittr plyr purrr reshape2 rlang tidyr]; }; ggloop = derive2 { name="ggloop"; version="0.1.0"; sha256="0jpbgb16jfsv557zvishln98y7nd6p1ryp6hxkrkmhp9p35vzvc0"; depends=[assertthat ggplot2 lazyeval magrittr plyr]; }; gglorenz = derive2 { name="gglorenz"; version="0.0.1"; sha256="0ar9ih6yvxb5pyba8y8jjsbwaq808baysjhpd15psjzhfbimjqfm"; depends=[ggplot2 ineq]; }; - ggm = derive2 { name="ggm"; version="2.3"; sha256="1n4y459x2i0jil8chjjqqjs28a8pzfxrws2fcjkg3il7zy0zwbw3"; depends=[igraph]; }; + ggm = derive2 { name="ggm"; version="2.5"; sha256="11wc6k2kj2ydy0dyks5mbvbhxm1r43id87anl1jg6dn0yv4m78di"; depends=[graph igraph]; }; ggmap = derive2 { name="ggmap"; version="3.0.0"; sha256="13dmzl6z62pzjiffilarkji46vy0sacxa8a7mhrhc3biq3ylzhln"; depends=[bitops digest dplyr ggplot2 glue httr jpeg magrittr plyr png purrr RgoogleMaps rjson scales stringr tibble tidyr]; }; ggmcmc = derive2 { name="ggmcmc"; version="1.3"; sha256="0p3akjbi0044nma8ynvqa42bkrgrb0jjx323k2pbrnlkq8x3ma1b"; depends=[dplyr GGally ggplot2 tidyr]; }; ggmosaic = derive2 { name="ggmosaic"; version="0.2.0"; sha256="0byhp7125r015wbbnv6fq13bx38krf11r39jx9dzbr0ci6kqzkdb"; depends=[dplyr ggplot2 plotly productplots purrr rlang tidyr]; }; ggmr = derive2 { name="ggmr"; version="0.1.1"; sha256="0941rvh7m5knlhp0m0mhm4j8spmch0pyvwhzs3bycq3vzlvzv1w7"; depends=[MASS]; }; ggmsa = derive2 { name="ggmsa"; version="0.0.2"; sha256="1ryzifcm1qsqng5gljdhgx6p81i8wg9s86j9bnlcllp0d6mbca2x"; depends=[Biostrings ggplot2 ggseqlogo magrittr tidyr treeio]; }; ggmuller = derive2 { name="ggmuller"; version="0.5.4"; sha256="0y7bm9fm5i8acpy6fa903ca2r9yasky7kg2hicm4xz5ni09jm20x"; depends=[ape dplyr ggplot2]; }; - ggnetwork = derive2 { name="ggnetwork"; version="0.5.1"; sha256="13qisn4msjzkpcmn7rh2c4ymqfxp9bayrvqngp9pysfmr6wvc6ia"; depends=[ggplot2 ggrepel network sna]; }; - ggnewscale = derive2 { name="ggnewscale"; version="0.4.0"; sha256="0w9lykxdrifm69mr157x1hirz37ws9m5lpmxaqbfq5picqyvplsx"; depends=[ggplot2 stringi]; }; + ggnetwork = derive2 { name="ggnetwork"; version="0.5.8"; sha256="1gdvywx2n4ph0dr8q1c5gfsmv4jjy0g41cnhjn68kkmg5fdc3ix8"; depends=[ggplot2 ggrepel igraph network sna]; }; + ggnewscale = derive2 { name="ggnewscale"; version="0.4.1"; sha256="1ryg0zs5qa2gjch3c21ylwwzr6kqbla2jpwfkrwbqbgjryhbphlm"; depends=[ggplot2]; }; ggnormalviolin = derive2 { name="ggnormalviolin"; version="0.1.2"; sha256="1gbv2b86nznw5bs05c4ns96b8hsxkhikhcf8syl2qbbafzy8vx6y"; depends=[dplyr ggplot2 magrittr scales]; }; ggpage = derive2 { name="ggpage"; version="0.2.3"; sha256="1qi8ydq3fxb1smk0jg9z1cv2xjq8c1lsnmz8l7c61rvdbjm3710v"; depends=[dplyr ggplot2 magrittr purrr rlang stringr tidytext]; }; ggparallel = derive2 { name="ggparallel"; version="0.2.0"; sha256="0zxaff0jbqkbavsmh1yyp3vdrxsam6a66hjw8lamv9pksdw1s2wf"; depends=[ggplot2 plyr reshape2]; }; @@ -8309,26 +8318,27 @@ in with self; { ggparty = derive2 { name="ggparty"; version="1.0.0"; sha256="0s6hr5p930kl3pj6ajwgwqz6yikc3l9hhzy1yn0nqc0r8pp2jyqf"; depends=[checkmate ggplot2 gtable partykit rlang survival]; }; ggperiodic = derive2 { name="ggperiodic"; version="1.0.0"; sha256="1cig715qy1kjjrn89cf505njdl2xccvjc5l0fwbqh86xgjayslxb"; depends=[data_table dplyr ggplot2 sticky tidyselect]; }; ggplot_multistats = derive2 { name="ggplot.multistats"; version="1.0.0"; sha256="1afzfa86vc484bcwpg7m1ky03jpax584rigzgai8w06pifkmz0il"; depends=[ggplot2 hexbin rlang scales]; }; - ggplot2 = derive2 { name="ggplot2"; version="3.2.1"; sha256="0mjswqiqcwm0aqxll16bx2kwa6c9km3aql87bdj4347n1ali94g3"; depends=[digest gtable lazyeval MASS mgcv reshape2 rlang scales tibble viridisLite withr]; }; + ggplot2 = derive2 { name="ggplot2"; version="3.3.0"; sha256="0j21am605kqqzlwhm45kaj0m2irnmy2vz0j7kzi9f0qdzrv3q3ij"; depends=[digest glue gtable isoband MASS mgcv rlang scales tibble withr]; }; ggplot2movies = derive2 { name="ggplot2movies"; version="0.0.1"; sha256="067ld6djxcpbliv70r2c1pp4z50rvwmn1xbvxfcqdi9s3k9a2v8q"; depends=[]; }; ggplotAssist = derive2 { name="ggplotAssist"; version="0.1.3"; sha256="1g0s1dkbrxmwqjqppagdbnx24s0nbjn09xwxix3dkfssz6drhala"; depends=[dplyr editData gcookbook ggplot2 ggthemes magrittr miniUI moonBook rstudioapi scales shiny shinyAce shinyWidgets stringr tibble tidyverse]; }; ggplotgui = derive2 { name="ggplotgui"; version="1.0.0"; sha256="1yfglg5438mwyml845isimzma5q6824x19jka509ng49bzmf1za0"; depends=[ggplot2 haven plotly RColorBrewer readr readxl shiny stringr]; }; - ggplotify = derive2 { name="ggplotify"; version="0.0.4"; sha256="0nv3wdmxnc5ww9m3xlgnb0jp30j45dg33nqc6gg3y36svg8anjcg"; depends=[ggplot2 gridGraphics rvcheck]; }; + ggplotify = derive2 { name="ggplotify"; version="0.0.5"; sha256="0pfnp4lrissf21z7867kdm6slr979kchyva8iaf83i1302kscph3"; depends=[ggplot2 gridGraphics rvcheck]; }; ggplotlyExtra = derive2 { name="ggplotlyExtra"; version="0.0.1"; sha256="1m2rhylpzj934gb50lxjp47rxz0kwl9i1p3n7w1rz4qi96pr5p1c"; depends=[ggplot2 plotly rlang]; }; ggpmisc = derive2 { name="ggpmisc"; version="0.3.3"; sha256="1m5ajcy6l8gb2h2ph32ij9dgn6fqpcsf9nf5dr5gas7a15ihpcas"; depends=[broom dplyr ggplot2 gridExtra lubridate magrittr MASS plyr polynom rlang scales splus2R stringr tibble xts zoo]; }; ggpointdensity = derive2 { name="ggpointdensity"; version="0.1.0"; sha256="0c9a14j3b0hvamqylhzldw2hjdxmfbllwahjkf3gg2rw337ld9iy"; depends=[ggplot2]; }; ggpol = derive2 { name="ggpol"; version="0.0.5"; sha256="0n54mmk9alc3bd9q3jb64xvxnszqndfwpi6h6n09gpvlrbj8mkdx"; depends=[dplyr ggplot2 gtable plyr rlang]; }; ggpolypath = derive2 { name="ggpolypath"; version="0.1.0"; sha256="0g9zfal3vqcx16fi4abxm6l5sam475lk1f6bdik487wc2v0dkq83"; depends=[ggplot2]; }; - ggpubr = derive2 { name="ggpubr"; version="0.2.4"; sha256="0ln1gh3zlfx5s7zqcpvfdiksq74v1pma5kwkhc6r0riqnjjd19pf"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif glue gridExtra magrittr polynom purrr rlang scales tidyr]; }; + ggpubr = derive2 { name="ggpubr"; version="0.2.5"; sha256="0kb3hpmnhj4mkbx1kx0kv5y22himr8dijqx7ra0h8hi0pf2l2ha7"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif glue gridExtra magrittr polynom purrr rlang scales tidyr]; }; ggpval = derive2 { name="ggpval"; version="0.2.3"; sha256="04s0pwi0pljdd8r6wnjyb3i3php6qgvpc1mdvhywcx2i2zqip2qx"; depends=[data_table ggplot2]; }; ggquickeda = derive2 { name="ggquickeda"; version="0.1.5"; sha256="13kszfsxnpbkcn3lnlcmrw5a0c3ny8gv9dn4ciphl40rk7qpi26v"; depends=[colourpicker dplyr DT Formula GGally ggplot2 ggpmisc ggpubr ggrepel ggstance gridExtra Hmisc lazyeval markdown plotly quantreg rlang scales shiny shinyjs stringr survival survminer table1 tidyr]; }; ggquiver = derive2 { name="ggquiver"; version="0.2.0"; sha256="1hsayqxf4brck1rx97yyprw1axc83lksgf7mn3rh8hqx4h1f5f0f"; depends=[dplyr ggplot2]; }; - ggraph = derive2 { name="ggraph"; version="2.0.0"; sha256="0qj7w3af0pgmd9mil6y571jikfkln7b8csvzg6b08spwbglfy1s3"; depends=[digest dplyr ggforce ggplot2 ggrepel graphlayouts gtable igraph MASS Rcpp rlang scales tidygraph viridis]; }; + ggraph = derive2 { name="ggraph"; version="2.0.2"; sha256="1ckq82hg52vr2wydkqv2wrppgjyvddd6bwqzrngqlm7j71xapjl0"; depends=[digest dplyr ggforce ggplot2 ggrepel graphlayouts gtable igraph MASS Rcpp rlang scales tidygraph viridis]; }; ggraptR = derive2 { name="ggraptR"; version="1.2"; sha256="18r70pnz7x8728lg447ds7swgk539gga9shax7rs4x56a710pf3q"; depends=[dplyr ggplot2 pacman purrr shiny]; }; ggrasp = derive2 { name="ggrasp"; version="1.0"; sha256="0lini89mcxl30kx38vny9896hdf4afrz5dgivbbikkb2yyfh2cq1"; depends=[ape bgmm colorspace ggplot2 mixtools]; }; - ggrepel = derive2 { name="ggrepel"; version="0.8.1"; sha256="10vjrcmx8yknfbx93d9a4y3z8gafri0fhimw6hcq733dmdvkml6m"; depends=[ggplot2 Rcpp scales]; }; + ggrepel = derive2 { name="ggrepel"; version="0.8.2"; sha256="1qaifn3dazdqbqlii210xhw7yf142iw7g9p2axmmxbz90p0by08d"; depends=[ggplot2 Rcpp scales]; }; ggridges = derive2 { name="ggridges"; version="0.5.2"; sha256="03pz257aw0mkh5k75rby9givkc1ky3n5scvhjhjiz9vry9fpffmh"; depends=[ggplot2 plyr scales withr]; }; - ggroups = derive2 { name="ggroups"; version="1.2.1"; sha256="159bzdck1npcp3spfi3ash1y5zhga9y0fbgw5vzrkayqrw4ayx4n"; depends=[]; }; + ggrisk = derive2 { name="ggrisk"; version="1.0"; sha256="02a11q0mz3a5qqssakys8jxy5rqmi6cwk6japv65fkz741fh65wx"; depends=[cutoff do egg fastStat ggplot2 nomogramFormula rms set survival]; }; + ggroups = derive2 { name="ggroups"; version="2.0.2"; sha256="1zsg82qb89dnz4dvkv0xb68p2v8rlhc35b6l00n9d25b4cxbmwck"; depends=[]; }; ggsci = derive2 { name="ggsci"; version="2.9"; sha256="0g73x6grbka7ahjh6z23m3wrcifp5rdfdiasbl8lq4sp6rplxwaa"; depends=[ggplot2 scales]; }; ggseas = derive2 { name="ggseas"; version="0.5.4"; sha256="1jpdijwll5l7bg7cmjnklkxffysi9ckzg50rw2a2cd00zwby11q9"; depends=[ggplot2 rlang seasonal zoo]; }; ggseqlogo = derive2 { name="ggseqlogo"; version="0.1"; sha256="13q6kcpxrqxqbji889fx63p0nsi08lk5yymkchig75r5k1d18ky1"; depends=[ggplot2]; }; @@ -8340,7 +8350,7 @@ in with self; { ggspatial = derive2 { name="ggspatial"; version="1.0.3"; sha256="0ka15qj3f0yq9nfkgk77wp490nz9ymi80918apv9zp6x39kcprj9"; depends=[abind ggplot2 plyr raster reshape2 rlang rosm scales sf tibble tidyr]; }; ggspectra = derive2 { name="ggspectra"; version="0.3.5"; sha256="0pvkh4cr9nyhhv9ikjs7nhjagal63k8zfbik28cmw2c2x31m019v"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands scales tidyr]; }; ggstance = derive2 { name="ggstance"; version="0.3.3"; sha256="0kdksay61hyb6612b07r84chh7a9aibjyclk3qcypvr9aang8hkh"; depends=[ggplot2 plyr rlang withr]; }; - ggstatsplot = derive2 { name="ggstatsplot"; version="0.1.4"; sha256="09dzph9h4zj6msz9d5dn7g8rbvl5781gagsad5hfjqn8m7vc1a47"; depends=[broomExtra cowplot crayon dplyr forcats ggcorrplot ggExtra ggplot2 ggrepel ggsignif groupedstats insight metaBMA metafor pairwiseComparisons paletteer parameters psych purrr rlang scales statsExpressions tibble tidyr WRS2]; }; + ggstatsplot = derive2 { name="ggstatsplot"; version="0.3.1"; sha256="05ily9798akg53w1k0sr9paizmz121y6acc74pghi09x9xdv3lbm"; depends=[broomExtra cowplot dplyr ggcorrplot ggExtra ggplot2 ggrepel ggsignif groupedstats insight ipmisc pairwiseComparisons paletteer purrr rlang statsExpressions tidyr]; }; ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; }; ggtern = derive2 { name="ggtern"; version="3.1.0"; sha256="1fhs5s3sxhb46abzni7cyymyknk9z7ff8fanln41pkih76s5i18j"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; }; ggthemes = derive2 { name="ggthemes"; version="4.2.0"; sha256="0rrkzfggc1nlda1w1lbqdycx6nawxbkac1szhvkwrqlzh6agxcsv"; depends=[ggplot2 purrr scales stringr tibble]; }; @@ -8350,29 +8360,30 @@ in with self; { ggvoronoi = derive2 { name="ggvoronoi"; version="0.8.3"; sha256="04dv33vnip0rrli1diq43v7vhr86bmxjdyxjbxz5x4371kbb312j"; depends=[deldir ggplot2 raster rgeos sp]; }; ggwordcloud = derive2 { name="ggwordcloud"; version="0.5.0"; sha256="0mr92738s3j9wm6mkr5hd2flqsqw3vfjifv3fajsygysbwrl8dn8"; depends=[colorspace ggplot2 png Rcpp scales]; }; gh = derive2 { name="gh"; version="1.1.0"; sha256="1bc9bn1078s664hc806dh0y1ncxif77q479rfmxfir9z7hwaz7yy"; depends=[cli httr ini jsonlite]; }; - ghibli = derive2 { name="ghibli"; version="0.3.0"; sha256="1527225yp9czmq7y1r08jvzwhxdxi50n5szay92hl9ln829x9phh"; depends=[]; }; - ghyp = derive2 { name="ghyp"; version="1.5.8"; sha256="0ncaib6k4z02p3lw4c0l5b7dhxjylmqxqbx96kgj7z1na6jkvmf3"; depends=[MASS numDeriv]; }; - gibble = derive2 { name="gibble"; version="0.2.0"; sha256="11fhswszdgackwkvals4k7pn8syfphkwvfx7kiv7psnsr94q376n"; depends=[dplyr rlang tibble]; }; + ghibli = derive2 { name="ghibli"; version="0.3.1"; sha256="1wnz26n0a3pgzigb2vp08v7swk061whi2zvfm6bih0aniqv5n7ml"; depends=[]; }; + ghql = derive2 { name="ghql"; version="0.1.0"; sha256="19awg98r2hwwwwrwh0166y8ij1clf58vrf02i8fhhfzddx3an6bz"; depends=[crul graphql jsonlite R6]; }; + ghyp = derive2 { name="ghyp"; version="1.5.9"; sha256="1lvx8jq0gjz9398nxkra0pq3q2cl4zbnggj4z4pqp3p6dahb0364"; depends=[MASS numDeriv]; }; + gibble = derive2 { name="gibble"; version="0.3.0"; sha256="19sj32jbq12a8zf03a39yqj8jln53nhb4b2v3khbq60nr9bxlm1r"; depends=[dplyr rlang tibble]; }; gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; }; gifski = derive2 { name="gifski"; version="0.8.6"; sha256="00w4bzp0rrp4isy1rnxs6g1q07r3wndadk3mqdrxk2wxi7jmghna"; depends=[]; }; gifti = derive2 { name="gifti"; version="0.7.5"; sha256="1y64bc33b5f64a4khp916s9zb7kbb24xgdg3pdlh0f8m6zrbmp4a"; depends=[base64enc R_utils xml2]; }; gim = derive2 { name="gim"; version="0.28.0"; sha256="1m9pb3dcphyjmadxr87lrd4fb2jacrx2mmcgrvqzc16gfm66n6d5"; depends=[numDeriv]; }; - gimme = derive2 { name="gimme"; version="0.6-1"; sha256="1ipak83ma1fl24snsd7xlbbhgv67m03r3g8xh9rhvmr6ajag7ada"; depends=[data_tree igraph imputeTS lavaan MIIVsem qgraph]; }; + gimme = derive2 { name="gimme"; version="0.7-1"; sha256="117157nyyyzb102cs2in7s44dl3v6d0aqbfyybq4rqb5cqqmfsvj"; depends=[data_tree igraph imputeTS lavaan MIIVsem nloptr qgraph]; }; gimmeTools = derive2 { name="gimmeTools"; version="0.1"; sha256="1g170rz3c3qx27yy67f7xab4gkm0pbbvwlwkcsczfxphad609ryl"; depends=[easycsv magrittr miniUI rhandsontable rintrojs rstudioapi shiny shinyjs shinyWidgets]; }; gimms = derive2 { name="gimms"; version="1.1.1"; sha256="06vq0apsadyfgnz7906v2kjy0nx3yn0agq4yschxz1r1zmgrnyki"; depends=[curl Kendall ncdf4 raster RCurl zyp]; }; giphyr = derive2 { name="giphyr"; version="0.2.0"; sha256="0273f7lama8bhaalafs66m6ksp32vx0j6rmh1qr4484i7wkmdfqn"; depends=[dplyr httr miniUI purrr rstudioapi shiny tibble]; }; gistr = derive2 { name="gistr"; version="0.5.0"; sha256="07k9p5sfy0k45frx63dwp6pk3gyh5zdv79f4knsciakk6xq9ds59"; depends=[assertthat dplyr httr jsonlite knitr magrittr rmarkdown]; }; git2r = derive2 { name="git2r"; version="0.26.1"; sha256="0dbl845sahv2i641ncaf06w06djravwc5wknp9syzx0ad8l0kmhk"; depends=[]; }; - git2rdata = derive2 { name="git2rdata"; version="0.2.0"; sha256="1hzvr1h6rbqqf69xkjc1c2x3c5wqp8za40yim7vd7sb398f1iq4q"; depends=[assertthat git2r yaml]; }; + git2rdata = derive2 { name="git2rdata"; version="0.2.1"; sha256="11mdalfgarqscb6yg0p9g4mwzwnbkq40migpv5sk0i3vdz0xpapp"; depends=[assertthat git2r yaml]; }; gitgadget = derive2 { name="gitgadget"; version="0.5.2"; sha256="0la0x3p50wk5wv2p4vkf3rh72psz3k18lcymxn354nqb7m1xdggs"; depends=[callr curl dplyr jsonlite markdown miniUI rstudioapi shiny shinyFiles usethis]; }; githubinstall = derive2 { name="githubinstall"; version="0.2.2"; sha256="0hqh86r2007hzdbm8rr0fwqhhsna7ji8sdgmdnrxkxraa5f2pfz3"; depends=[curl data_table devtools httr jsonlite mockery]; }; gitignore = derive2 { name="gitignore"; version="0.1.3"; sha256="0ckvl5i99k9sjvlk3cfjyclhmchrlqdz4379nmlckh4jpmnckzk0"; depends=[clipr clisymbols crayon curl glue here jsonlite purrr xfun]; }; gitlabr = derive2 { name="gitlabr"; version="1.1.6"; sha256="1p68w0q8mjpz2hr6ys1qbfw1y4b35hgs27kzfkzv9hfi1vxqfd1h"; depends=[arpr base64enc dplyr httr magrittr purrr stringr tibble yaml]; }; gitlink = derive2 { name="gitlink"; version="0.1.3"; sha256="1g34cyx35wlpq42alsayk69x708zxqgvbdndb7j6n1q0rm4vncvd"; depends=[htmltools rlang]; }; givitiR = derive2 { name="givitiR"; version="1.3"; sha256="0y2slhxhj7k413kjaydin9hq3x2xgx4cgjshdplwnmg3x2nakn31"; depends=[alabama rootSolve]; }; - gjam = derive2 { name="gjam"; version="2.2.7"; sha256="008g394sqcxr3jdhivldaaqi3d6h2mn16wdxcsqmspk80kiljnvr"; depends=[MASS RANN Rcpp RcppArmadillo]; }; + gjam = derive2 { name="gjam"; version="2.3.1"; sha256="1mz4d0ivlrmas73wb8mcs6cw5f34ilakpr59mffyli4wkkplqf4k"; depends=[MASS RANN Rcpp RcppArmadillo]; }; gk = derive2 { name="gk"; version="0.5.1"; sha256="1hgxb1lp78pbnj22i7ryf46im301j05y7hh75z2fxvv5nqgg2v75"; depends=[Ecdat lubridate progress]; }; - gkmSVM = derive2 { name="gkmSVM"; version="0.79.0"; sha256="04dakbgfvfalz4rm4fvvybp506dn5fbj5g86ybfhrc6wywjllsz3"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; }; + gkmSVM = derive2 { name="gkmSVM"; version="0.80.0"; sha256="0ljcga246ad0ql8x3drvrdsyp0f20mgp3p6lnl79xb76qgfdnm0p"; depends=[kernlab Rcpp ROCR seqinr]; }; glacierSMBM = derive2 { name="glacierSMBM"; version="0.1"; sha256="0117fzz2b1lccs0kkwz59w2yysi72j54yvz7373pz11w7rjds84f"; depends=[raster sp udunits2]; }; glamlasso = derive2 { name="glamlasso"; version="3.0"; sha256="1ynhl868kh25l8m04ln6ix31z9r26lrbr5ajprpq9yfhqs4l9ddc"; depends=[Rcpp RcppArmadillo]; }; glancedata = derive2 { name="glancedata"; version="1.0.1"; sha256="01j7syjn33pc7hq032nmyak38wn35yv3n7is9g2ggs14kj3xqb0c"; depends=[dplyr forcats GGally ggplot2 gridExtra openxlsx purrr tibble tidyr]; }; @@ -8381,7 +8392,7 @@ in with self; { glasso = derive2 { name="glasso"; version="1.11"; sha256="02p3612rpydk195n2qr77lp1j2w8zsw1ckkk98c8angm4r5q8dsc"; depends=[]; }; glassoFast = derive2 { name="glassoFast"; version="1.0"; sha256="1sgmh4l06q7mrmgnimphpqgix4k4jzaj2l30kpmnf92caa2v7ngw"; depends=[]; }; glba = derive2 { name="glba"; version="0.2"; sha256="0ckcz6v6mfbv34s8sp086czhb5l58sky79k84332rrz6wj47p3md"; depends=[]; }; - glcm = derive2 { name="glcm"; version="1.6.4"; sha256="1al4i8r9g7izl5d4c3ccqx6zw9vfcvdr6zgzql8wjkq9fsdrrnq1"; depends=[Rcpp RcppArmadillo]; }; + glcm = derive2 { name="glcm"; version="1.6.5"; sha256="13my6y9jqd86cg5n74p4b8mqbdgwnanxx4qf1rrhm5jxf6sa31qm"; depends=[raster Rcpp RcppArmadillo]; }; gld = derive2 { name="gld"; version="2.6.2"; sha256="1wrw7i5bq7rb2ahadm57y9fmr697r7lp9ln7ajcd592b0nn60n4i"; depends=[e1071 lmom]; }; gldrm = derive2 { name="gldrm"; version="1.5"; sha256="1mbdxqjw6sa47kigwrjq1gn6vi36zhg9j2lck144iwa10ms0y9xp"; depends=[]; }; glinternet = derive2 { name="glinternet"; version="1.0.10"; sha256="15dikazmhs7md7j8p45f67h3947br18hsrjl74cjk10vazd0ihng"; depends=[]; }; @@ -8394,7 +8405,7 @@ in with self; { glmaag = derive2 { name="glmaag"; version="0.0.6"; sha256="1yk5bx1gyj97b5qjy30q1gsjlp9amklwf070i0129f8dj7vjyaf0"; depends=[data_table foreach ggplot2 gridExtra huge Matrix maxstat OptimalCutpoints plotROC pROC Rcpp RcppArmadillo shiny survival survminer]; }; glmbb = derive2 { name="glmbb"; version="0.3"; sha256="12yabwswps0fmprh8nb9jdny9xrm13jvc0d9m3w04ppmsvalrmwl"; depends=[digest]; }; glmc = derive2 { name="glmc"; version="0.3-1"; sha256="0x6jk2l5rpjkp5x815gpiwv8maa7mhmy6m8gaxbv1cbn3zyccynn"; depends=[emplik]; }; - glmdisc = derive2 { name="glmdisc"; version="0.3"; sha256="13x5ri4kig0h49j3fqpj5ad37jnm0phnxr42h64562fcj7bmiidq"; depends=[caret gam MASS nnet Rcpp RcppEigen RcppNumerical]; }; + glmdisc = derive2 { name="glmdisc"; version="0.4"; sha256="1pk731086lhga9a7ay4pqzysavlpyqx1la5aj1j8msh5imgw9cim"; depends=[caret gam MASS nnet Rcpp RcppEigen RcppNumerical]; }; glmdm = derive2 { name="glmdm"; version="2.60"; sha256="09vljki24fccqkvxkmg2i6a8pxqhfwm155b41m2q51lqaq29bfw7"; depends=[]; }; glmertree = derive2 { name="glmertree"; version="0.2-0"; sha256="0lfn6dap38i6cnfy4gdap13aq81h9cm3bip7ci57q9br9b00x7ib"; depends=[Formula lme4 partykit]; }; glmgraph = derive2 { name="glmgraph"; version="1.0.3"; sha256="16sq6i7kbw20nvwikpa02z3pb7wqw3270j6ss7f8sgf548skhmx0"; depends=[Rcpp RcppArmadillo]; }; @@ -8403,12 +8414,12 @@ in with self; { glmmEP = derive2 { name="glmmEP"; version="1.0-3.1"; sha256="0fql85m0mxn58jh3mgrcw56bb4dx7amrz39ngqrljwi5pv5i7aj4"; depends=[lme4 matrixcalc]; }; glmmLasso = derive2 { name="glmmLasso"; version="1.5.1"; sha256="1az9vdnyqyrfn1q7zrn6x4ywx77b0vg65cni45x37b0ybkwpis39"; depends=[Matrix minqa]; }; glmmML = derive2 { name="glmmML"; version="1.1.0"; sha256="121iclp86nfm9mybvfwascs937i0z2mbv982hn894q6g7jkqiw1l"; depends=[]; }; - glmmTMB = derive2 { name="glmmTMB"; version="0.2.3"; sha256="035hkywa37bz555fv6znxd4hfcs5w884365wfnwk4jx5vann4vvb"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; + glmmTMB = derive2 { name="glmmTMB"; version="1.0.1"; sha256="0sdx1q7wc7895xh8747r4p0wkij0xjgn5ij62ipi9423zd0sr0mm"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; glmmboot = derive2 { name="glmmboot"; version="0.5.0"; sha256="0d1nym28svij00wjp2lx42fczllxmjl95hy45dgy6j3k70pvvgfi"; depends=[]; }; glmmfields = derive2 { name="glmmfields"; version="0.1.3"; sha256="1sygppwm58hvwj95nlyz59cjlnkrq82kpws6izbivl7p6wb06lil"; depends=[assertthat BH broom cluster dplyr forcats ggplot2 loo mvtnorm nlme Rcpp RcppEigen reshape2 rstan rstantools StanHeaders]; }; glmmsr = derive2 { name="glmmsr"; version="0.2.3"; sha256="1fbg5zji0xjr9q1yc6phsp37nsrj7nfs8yiri0j9s84wzgwjili1"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; glmnet = derive2 { name="glmnet"; version="3.0-2"; sha256="0b3nnfzp8dxcdkvxr0yvy6d58yk3xg4kz1wqa42bxqppbakmd2gl"; depends=[foreach Matrix shape]; }; - glmnetUtils = derive2 { name="glmnetUtils"; version="1.1.4"; sha256="1bf5gn3wrlm3mzgrf9dyv07yv90aly5zqgzf597ws6600ln1j9nd"; depends=[glmnet Matrix]; }; + glmnetUtils = derive2 { name="glmnetUtils"; version="1.1.5"; sha256="0q8h3pniblcgvghffsiz0qqipq8cpln4dg8nwg0k4m1j2n6h582h"; depends=[glmnet Matrix]; }; glmnetcr = derive2 { name="glmnetcr"; version="1.0.5"; sha256="0s21kaky23wgm0nbgncrg6xiwnp5x5s2zcv854493rrclx2s6r5w"; depends=[glmnet]; }; glmpath = derive2 { name="glmpath"; version="0.98"; sha256="1jbiqqd1s93i941dhyyx50zlgwavhyjfw8bx13z4gz05rdvi4gn8"; depends=[survival]; }; glmpathcr = derive2 { name="glmpathcr"; version="1.0.8"; sha256="00hbgp1kdbvihqvx03vv6gq32whrkcfq3n32bbj3cda85dnivlwq"; depends=[glmpath]; }; @@ -8424,48 +8435,48 @@ in with self; { globals = derive2 { name="globals"; version="0.12.5"; sha256="1ha8iasgijp4q3v2b0b17y1wh7cd3nvzd9b03w49qm2bidkaf68m"; depends=[codetools]; }; globe = derive2 { name="globe"; version="1.2-0"; sha256="0xa0q5dac0g7xdlr679f3km8nqxlm7gi4msp9fbfivfvy0rmri96"; depends=[]; }; glogis = derive2 { name="glogis"; version="1.0-1"; sha256="1sbvcg5slvd2c7fasvbj534x36rh11zq3mxv5z0jwpqd6h1xadmd"; depends=[sandwich zoo]; }; - glpkAPI = derive2 { name="glpkAPI"; version="1.3.1"; sha256="06p8zvmshymcw994mmf1ar00kfj645z8dp18yy4i5bl6qydbpb8k"; depends=[]; }; + glpkAPI = derive2 { name="glpkAPI"; version="1.3.2"; sha256="1qwq6vbx1symly6k72xgj5qzqw7j6wdsgiflm649pdxnisfgzh00"; depends=[]; }; glrt = derive2 { name="glrt"; version="2.0"; sha256="0p2b0digndvnn396ynv56cdg436n3ll7pxkb81rs3dhwbyqyc948"; depends=[survival]; }; - glue = derive2 { name="glue"; version="1.3.1"; sha256="1a1ycg9r3gd91visp49q49rsrdgyf8kr9dxdy3hk99kikn4z5hag"; depends=[]; }; + glue = derive2 { name="glue"; version="1.3.2"; sha256="0alklqcf68kmccssp4j7a7fv553pyqyy6mkkfslav83inppm4d3g"; depends=[]; }; gluedown = derive2 { name="gluedown"; version="1.0.2"; sha256="1vq5zgwlwj5rzdwj7z9ypnvj2fw9m653bdbivb2hx2z2hl8qwfp9"; depends=[glue]; }; - gluvarpro = derive2 { name="gluvarpro"; version="2.0"; sha256="0ka9ymajkm910r8nzvcx19zvpmz8vr59k1a5vhbz49sqqc0ri68g"; depends=[ggplot2 gridExtra pracma scales tidyr zoo]; }; + gluvarpro = derive2 { name="gluvarpro"; version="4.0"; sha256="09l9yincr1k5j9wnj3zvfzsffjh3r54aa8fn0ik8vhlbq13ag8kp"; depends=[ggplot2 gridExtra pracma scales tidyr zoo]; }; gmDatabase = derive2 { name="gmDatabase"; version="0.5.0"; sha256="0prap4a8pvylmvakd2ii87jz9bqf0vvfsxdi4iwa40nx444hqhx2"; depends=[DBI digest foreach RMySQL shiny]; }; gma = derive2 { name="gma"; version="1.0"; sha256="08hxbs9z4vq5zjis0lgdcvlysaj1k7i0icdk3wsyqf3wd9znsibi"; depends=[car MASS nlme]; }; gmailr = derive2 { name="gmailr"; version="1.0.0"; sha256="0wgh428qrwn6rxkcv9xmpya4ygrmc5pblxp0fw0ddgwbl99dhhi5"; depends=[base64enc crayon gargle httr jsonlite lifecycle magrittr mime rematch2]; }; gmapsdistance = derive2 { name="gmapsdistance"; version="3.4"; sha256="1hazf6xb4ja6h2lrl63kbd78wzny9sljiid9rq1r3szn3l1mc7dn"; depends=[RCurl XML]; }; gmat = derive2 { name="gmat"; version="0.2.1"; sha256="035x8b982qk3ik9qhxa9jhkczmafix6nbpbz0r5smby6q6bhj6jz"; depends=[gRbase igraph]; }; gmediation = derive2 { name="gmediation"; version="0.1.1"; sha256="0md4h298vqw67qrjcaia6xz8s7akdpcmxa83irm12qgbh56a5rpr"; depends=[MASS plyr VGAM]; }; - gmeta = derive2 { name="gmeta"; version="2.3-0"; sha256="1izfz6gkisa8rskhfka6q73rcgzwdsmkdhy79jwcaqk25jrwfk60"; depends=[BiasedUrn binom]; }; gmfd = derive2 { name="gmfd"; version="1.0.1"; sha256="03sag09x7pjyzsp6w1z06108ig068krmw75064cnl3pqfvfyjfgr"; depends=[]; }; gmm = derive2 { name="gmm"; version="1.6-4"; sha256="15dwf3dgr88n3s1i4lqmv75vfmrc85kdhhgs2gprqkhpgprmzb83"; depends=[sandwich]; }; gmnl = derive2 { name="gmnl"; version="1.1-3.1"; sha256="01mman2nh7wzlhh89iwaskz9n15v3p5llid5557dwmqn8ybzsdvx"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; }; gmodels = derive2 { name="gmodels"; version="2.18.1"; sha256="0s8kd8krqk4kwv2zqxpsfy3w8qdwf5naf4b5l383vidq9sil0qb2"; depends=[gdata MASS]; }; gmp = derive2 { name="gmp"; version="0.5-13.6"; sha256="0j2sz2nw41y9306rl1b8hbn0spz7453z5iawcq0bvslyrhc1d9ir"; depends=[]; }; gmt = derive2 { name="gmt"; version="2.0-1"; sha256="1g1sj9gq3h3s0pdcfvzg7iifkns5azn3pa83if0d3yzc28cjf0yz"; depends=[]; }; - gmvarkit = derive2 { name="gmvarkit"; version="1.1.2"; sha256="02m6brh7rj35a0yjzmfc1p16rlyb97fsqbsqjj0ndcdadbqcxz73"; depends=[Brobdingnag mvnfast pbapply]; }; + gmvarkit = derive2 { name="gmvarkit"; version="1.1.3"; sha256="08vfyad8fs6zpwgvxs2qrvnbii824fx4yxghrvcqx25x1j71vvnl"; depends=[Brobdingnag mvnfast pbapply]; }; gnFit = derive2 { name="gnFit"; version="0.2.0"; sha256="0cji4zjslh18dfj0l827r6br4hx2f0akiaxrg7fhhyyyhgdcjnsm"; depends=[ismev rmutil]; }; gnlm = derive2 { name="gnlm"; version="1.1.1"; sha256="1krbz791l5qc06sh6my0bkq420b5afncw87lhyx1yiml2yg46zrk"; depends=[rmutil]; }; - gnm = derive2 { name="gnm"; version="1.1-0"; sha256="01d7wxsh4d9w4jh8vn62sjzgpll650yl3klfhlaa8j0qwpxr2fml"; depends=[MASS Matrix nnet qvcalc relimp]; }; + gnm = derive2 { name="gnm"; version="1.1-1"; sha256="1lddsdsg43wpg681s906i4xqqfbjdd1qb9ml5dfprb02i1806aa2"; depends=[MASS Matrix nnet qvcalc relimp]; }; gnmf = derive2 { name="gnmf"; version="0.7.1"; sha256="1vbcsxg61mlsdir8szd0rdxfswr7kr6a07750ar2l9b4rkg3yfqz"; depends=[]; }; - gnn = derive2 { name="gnn"; version="0.0-1"; sha256="1wjir501l9cfkl9xrga06h3nwrz9lqsl9ypqxjj3iz6yi7jd12w1"; depends=[keras qrng tensorflow]; }; + gnn = derive2 { name="gnn"; version="0.0-2"; sha256="0sh9b6d0zvrml7d1bnirxld2lwrgrd7ma3ky7xl71kis0x3fjdq9"; depends=[keras qrng tensorflow]; }; gnorm = derive2 { name="gnorm"; version="1.0.0"; sha256="17h43qwb07wk5hiif89k6dgn6bbdsqfy2jy3k5blbdhhp3b9jcqp"; depends=[]; }; gnumeric = derive2 { name="gnumeric"; version="0.7-8"; sha256="0iwl00mzsg8h8q67bjp6485idjlmj24362b1rbmkifckss8hrc98"; depends=[XML]; }; goeveg = derive2 { name="goeveg"; version="0.4.2"; sha256="0k9pyph065x8wp452x8kz28ikhsbrm80ln4yssmcgqm7085dyyya"; depends=[cluster fields Hmisc mgcv vegan]; }; + gof = derive2 { name="gof"; version="1.0.1"; sha256="0m9g3g5aw8wiz6am56ms2a5ipyk68gxd00bgs840lprgfdd4iw1n"; depends=[lava mets Rcpp RcppArmadillo]; }; gofCopula = derive2 { name="gofCopula"; version="0.3-1"; sha256="05n30mvy7rn1pkyy2pfhk05nab6pkagydws8ri3ixmyvrspal23b"; depends=[copula doSNOW foreach MASS numDeriv progress R_utils SparseGrid VineCopula yarrr]; }; - gofMC = derive2 { name="gofMC"; version="1.1.2"; sha256="0hbqx0z2517qgmp6sjg76hv74yrkfbswb9rmfjmsmcyzj2x67w86"; depends=[ggplot2 scales]; }; gofastr = derive2 { name="gofastr"; version="0.3.0"; sha256="02jn4xbbafl7siwvkqns1818wmw813x9cvqfcnpnmcippiqhrb0b"; depends=[data_table quanteda slam SnowballC tm]; }; goffda = derive2 { name="goffda"; version="0.0.6"; sha256="0j2fx3vzd4rda4hlhgkkcq1rgn79rah2r5dkx2rikl3rkfjjj6yi"; depends=[fda_usc glmnet ks Rcpp RcppArmadillo]; }; goft = derive2 { name="goft"; version="1.3.4"; sha256="15n1av7r6w8hihxlgw9pd570qgrlcprkkacln15chvjs3b0i60la"; depends=[fitdistrplus]; }; goftest = derive2 { name="goftest"; version="1.2-2"; sha256="0ivnkqhv5xgiv05dm648nngacymd8x8g0fyppv3bc0mhcqk9k5z4"; depends=[]; }; gogarch = derive2 { name="gogarch"; version="0.7-2"; sha256="03gpl73zc6kx4gni59xbg7b38dkpd7p4c7kvlqm46f58j257viik"; depends=[fastICA fGarch]; }; goldi = derive2 { name="goldi"; version="1.0.1"; sha256="191ac02bwrxr3khq6qirhxzfhv7pqfhqyg7jb473p5vwygpvc53l"; depends=[dplyr futile_logger magrittr Rcpp RcppArmadillo SnowballC tm]; }; - golem = derive2 { name="golem"; version="0.1"; sha256="06nn0a3l4zxjz732wsglyqjgz39frzn8dcr2k39h7b37vkwwkk2m"; depends=[attempt cli crayon desc dockerfiler DT glue htmltools pkgload processx remotes rlang roxygen2 rsconnect rstudioapi shiny stringr testthat usethis yesno]; }; + golem = derive2 { name="golem"; version="0.2.1"; sha256="07g5sagdq1n5i24bc8pnx9y303adraqppq1j9lyd4n5q0phbgh2y"; depends=[attempt cli config crayon desc dockerfiler fs here htmltools jsonlite pkgload remotes rlang roxygen2 rstudioapi shiny testthat usethis yaml]; }; gomms = derive2 { name="gomms"; version="1.0"; sha256="1i9d5y28wrhal990x7xxy99v3z9y2pzlakj7wnynd3dpx5pqr0jj"; depends=[]; }; goodpractice = derive2 { name="goodpractice"; version="1.0.2"; sha256="08rnm8z0pry5mwpc7p37r6f2rd56dry9djpcvvs9yl170w56psx0"; depends=[clisymbols covr crayon cyclocomp desc jsonlite lintr praise rcmdcheck rstudioapi whoami withr xml2 xmlparsedata]; }; googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.7.1"; sha256="1px57a5kqmnlny11p0niak6096pz1q8jvd9xbyld99hrwicav13r"; depends=[assertthat dplyr googleAuthR httr jsonlite magrittr memoise purrr rlang tibble tidyr]; }; googleAuthR = derive2 { name="googleAuthR"; version="1.1.1"; sha256="053s6n28cq35gn18ywipygw3bpwsi1qv6rr4vv2bi9q6sy6rb8q3"; depends=[assertthat digest gargle httr jsonlite memoise rlang]; }; + googleCloudRunner = derive2 { name="googleCloudRunner"; version="0.1.1"; sha256="0pdy9z3k2pz2vvp64g60ddigy5nvy3p9qwaqh2bxiw6vs5g4yaqs"; depends=[assertthat googleAuthR googleCloudStorageR httr jsonlite openssl yaml]; }; googleCloudStorageR = derive2 { name="googleCloudStorageR"; version="0.5.1"; sha256="0sd6ca1ksv22avr5rcvkf5089f9igb8gqa83kidlc4xklaj6g92m"; depends=[assertthat curl googleAuthR httr jsonlite openssl yaml zip]; }; - googleCloudVisionR = derive2 { name="googleCloudVisionR"; version="0.1.0"; sha256="1n7lbqx7qiahmirydli9nvq4w4i26qnyk3s2kxy4aj413619ym67"; depends=[caTools data_table googleAuthR jsonlite purrr]; }; + googleCloudVisionR = derive2 { name="googleCloudVisionR"; version="0.2.0"; sha256="1n4gkmnwp9wadxz1izggxnpcpm4bz3imhq5y3i2szr8zwafcqqjv"; depends=[data_table glue googleAuthR jsonlite purrr]; }; googleComputeEngineR = derive2 { name="googleComputeEngineR"; version="0.3.0"; sha256="1s0qvnijzkja645lim373swk815n3s1292q6sk3q36ss70q42cfg"; depends=[assertthat future googleAuthR httr jsonlite]; }; googleLanguageR = derive2 { name="googleLanguageR"; version="0.2.0"; sha256="1l0gnynild95k9fw1d398zd4dkws97p13vvfv6jaklqj0xmh9ib8"; depends=[assertthat base64enc googleAuthR jsonlite magrittr purrr tibble]; }; googlePolylines = derive2 { name="googlePolylines"; version="0.7.2"; sha256="0czfsmf8gv38g950l9xkk67q9v53pk9xk9yr2flbdpm8nlrdpjz7"; depends=[BH Rcpp]; }; @@ -8486,11 +8497,11 @@ in with self; { gower = derive2 { name="gower"; version="0.2.1"; sha256="007ivwn1nagpi26qq8iih1c2l61c53glvv60n90hi341ry8vwgxg"; depends=[]; }; gpDDE = derive2 { name="gpDDE"; version="0.8.2"; sha256="100g2f8zlpbwxb46h62pgvidll8aflz1zl4inyh8dml6vhm9pilp"; depends=[CollocInfer deSolve fda forecast lars limSolve MASS nnls penalized trustOptim TSA]; }; gpairs = derive2 { name="gpairs"; version="1.2"; sha256="09mkdbs9hklxnmqcsnf65s3dfsfcr7kppp6zxj08v5hxym1gpz3l"; depends=[barcode colorspace lattice MASS vcd]; }; - gpclib = derive2 { name="gpclib"; version="1.5-5"; sha256="08j81b8wymsgin20n54gvm6m54rmdic51p6qzs9cz4pmgl7dkkjv"; depends=[]; }; + gpclib = derive2 { name="gpclib"; version="1.5-6"; sha256="11jjgg74l8hy9jz4jylhriqnzv8jcf12y1bkx22v29z3fhgkwkps"; depends=[]; }; gpg = derive2 { name="gpg"; version="1.2.2"; sha256="1qc7w4d6frp0j4yk0q7slkj1mps80bv78lixcpw1shgx48rp41kh"; depends=[askpass curl]; }; gpk = derive2 { name="gpk"; version="1.0"; sha256="1zfhkqyypb24mhbj2zi9qy3gw0kqxvlp8j5ni3zm7k5rz1bnrygg"; depends=[]; }; gplm = derive2 { name="gplm"; version="0.7-4"; sha256="0apvj14nl5qbi4dhhdx5nih5lvjwfcipvr8cyk6xsz4r5gfr2iw4"; depends=[AER]; }; - gplots = derive2 { name="gplots"; version="3.0.1.2"; sha256="0vrm7wqrmqsmfrc070r9chpzb0vv60pay2lyar9qxfry6bsrvx86"; depends=[caTools gdata gtools KernSmooth]; }; + gplots = derive2 { name="gplots"; version="3.0.3"; sha256="0hs6mk48i9yd43rg9wfjc2nxsjjwrnpifxqvxkv8ah18kvpd6xnp"; depends=[caTools gdata gtools KernSmooth]; }; gpmap = derive2 { name="gpmap"; version="0.1.1"; sha256="00jhslbxbp6dgq7bw346hfpw0gans048vsn7chyzjhyr7ah5xrfg"; depends=[foreach ggplot2 isotone plyr]; }; gppm = derive2 { name="gppm"; version="0.2.0"; sha256="1n9is3xj52lsck2fiy9j320p2ca6ib36s251i7g3iz99a77b0ahh"; depends=[ggplot2 ggthemes MASS mvtnorm Rcpp rstan]; }; gprofiler2 = derive2 { name="gprofiler2"; version="0.1.8"; sha256="0xa2r40alsj9d1kgkchli7p9wcffbjqbz16f8crribgl47zwlvxc"; depends=[crosstalk dplyr ggplot2 gridExtra jsonlite plotly plyr RCurl tidyr viridisLite]; }; @@ -8500,6 +8511,7 @@ in with self; { gquad = derive2 { name="gquad"; version="2.1-1"; sha256="19k7cqp2j5vb6m9hxdm951wfjh6nsswb64pdz9g93ypcqrg02wa4"; depends=[ape seqinr]; }; grImport = derive2 { name="grImport"; version="0.9-3"; sha256="109mrdvq06xq3zgn9ngz0c7zzgqkv5zbpvsb2i636vmlk6y4dpkd"; depends=[XML]; }; grImport2 = derive2 { name="grImport2"; version="0.2-0"; sha256="19q0dd8fpp1g4xf6sg5f8dxybwxjfw553ra6wgjd8b74fzca40m1"; depends=[base64enc jpeg png XML]; }; + grabsampling = derive2 { name="grabsampling"; version="1.0.0"; sha256="031a4ak84k2mbhrmjbai3q8qnf2z3d9rp0xra67x74a99av9lzs9"; depends=[extraDistr ggplot2 ggthemes plyr reshape2]; }; gradDescent = derive2 { name="gradDescent"; version="3.0"; sha256="1jxgvnjw9qk5bkb0fw4kyks4vb9d1933jn79ry0w6956mq2xbb79"; depends=[]; }; grade = derive2 { name="grade"; version="0.2-1"; sha256="085hfvqn880yk19axdjv3z9jr33kls212vs172a8mzhnkallph1r"; depends=[]; }; gradeR = derive2 { name="gradeR"; version="1.0.5"; sha256="1c7x16z1mn7ys63vdwpy8b2x21k35pbmnpl52h372pfrsvxxhb23"; depends=[testthat]; }; @@ -8518,51 +8530,53 @@ in with self; { graphicalVAR = derive2 { name="graphicalVAR"; version="0.2.2"; sha256="1jzhqbdylpzc8d28vz2k34i9dpxx5x34bgvx73z8wjglnn6j27b8"; depends=[dplyr glasso glmnet igraph Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; graphicsQC = derive2 { name="graphicsQC"; version="1.0-8"; sha256="12vg93xfmkv73i19vkb10q2qngmsxd3y42z3l6izdywbdc3cdfkg"; depends=[XML]; }; graphkernels = derive2 { name="graphkernels"; version="1.6"; sha256="1gn3ihqz7m0rdvvc2fp7hsgq583wh5cnz7200a2ff89xc04zs3dc"; depends=[igraph Rcpp RcppEigen]; }; - graphlayouts = derive2 { name="graphlayouts"; version="0.5.0"; sha256="03dizbhhdhnzbj2i5zvqgs617kwcv4h2pha4f16adic0fph1rxl3"; depends=[igraph Rcpp RcppArmadillo]; }; + graphlayouts = derive2 { name="graphlayouts"; version="0.6.0"; sha256="1la016m37kp79zk8p1yx9kaha8y6d4w52w39h0mzv1mfsi6d75w0"; depends=[igraph Rcpp RcppArmadillo]; }; graphon = derive2 { name="graphon"; version="0.3.3"; sha256="1jsjbyk1hbmdlgap3gaf1cdrrbgfccr4lgpdi7g3bzp3mjjbijh5"; depends=[Rdpack ROptSpace]; }; graphql = derive2 { name="graphql"; version="1.5"; sha256="0zi1l93yk5rlgdy4j2nph14w0h8kgvnbzk9fi2jfys8s3fz54ksr"; depends=[jsonlite Rcpp]; }; graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; }; + graphsim = derive2 { name="graphsim"; version="0.1.2"; sha256="12ck2svjwfl2zqyhzzm3h9a57hy3gklpbbw8j9nnmagskxags5x3"; depends=[igraph Matrix matrixcalc mvtnorm]; }; gratia = derive2 { name="gratia"; version="0.3.0"; sha256="0n0ps6r65bh8yl6rq6jdh9lxcm66py3rphcz6649v3qz24ijq110"; depends=[cowplot dplyr ggplot2 mgcv mvnfast purrr rlang tibble tidyr]; }; graticule = derive2 { name="graticule"; version="0.1.2"; sha256="1yvrijvyjilfql72dxj32b3sczqv065zj61729wrrzn63xcifvmb"; depends=[raster sp]; }; - grattan = derive2 { name="grattan"; version="1.8.0.0"; sha256="1604hrbh897hdgxg2ack4c47xzqlgwgy4nn96lyc2sk3qvw0l7s7"; depends=[assertthat data_table fastmatch forecast fy hutils ineq magrittr Rcpp rsdmx zoo]; }; - gravitas = derive2 { name="gravitas"; version="0.1.0"; sha256="0w53rz6ips5cl2xigb16ffskjdnlx98f20slkpvdh4s2vwvbvk74"; depends=[dplyr ggplot2 ggridges ineq lubridate lvplot magrittr RColorBrewer rlang shiny stringr tibble tidyr tsibble]; }; + grattan = derive2 { name="grattan"; version="1.8.0.1"; sha256="113f4rsmmv9czc4khdfndxw5cxsiad7scqmnrfcj2ar03ybbp2gn"; depends=[assertthat data_table fastmatch forecast fy hutils ineq magrittr Rcpp rsdmx zoo]; }; + gravitas = derive2 { name="gravitas"; version="0.1.2"; sha256="1hgxr6yq98w3vfbl9h575bi7l2g10ahgdqcq06r3apksikfn6pc2"; depends=[dplyr ggplot2 ggridges ineq lubridate lvplot magrittr RColorBrewer rlang shiny stringr tibble tidyr tsibble]; }; gravity = derive2 { name="gravity"; version="0.9.8"; sha256="1yx71gidv3ivjfip994ciaiwk2cvvm8z16yax4lwpwgl1fxj1p4k"; depends=[censReg dplyr glm2 lmtest magrittr MASS multiwayvcov purrr Rdpack rlang sandwich survival tibble tidyr]; }; + grec = derive2 { name="grec"; version="1.4.1"; sha256="1vy3idjvayzx9j9pf5bv5bxycjca3w3c4x4lzzbrdi3c97508sa8"; depends=[imagine raster]; }; greenclust = derive2 { name="greenclust"; version="1.1.0"; sha256="198ix55x8cl5wx09p6ahzy3bvig86mvqf2qywjfilp6b4hnjgk7l"; depends=[]; }; gremlin = derive2 { name="gremlin"; version="0.1.0.1"; sha256="1qsjj910lmwdnmbn0fxakw713sk7myavgrmp5xm86my7cm866hmb"; depends=[Matrix]; }; gren = derive2 { name="gren"; version="0.0.1"; sha256="1wb5wwdjxi7q36md7xzmbw5lrggcgghkz3pmxipjpxw8kfv804xp"; depends=[glmnet Iso pROC Rcpp RcppArmadillo]; }; - greport = derive2 { name="greport"; version="0.7-1"; sha256="1h1g3khb30n3y8l1sxpas2s6s667az4yxvsq42x5dfx8fic42p6n"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; }; + greport = derive2 { name="greport"; version="0.7-2"; sha256="1p5x4sar88ss8n1m0c73arac10mq4ircjad38kbin6l0nk9z1mh2"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; }; greta = derive2 { name="greta"; version="0.3.1"; sha256="0wy1619drj8ir6r44xcliiirgibksd80gmjx21am2h580k0x0xq2"; depends=[coda future progress R6 reticulate tensorflow]; }; gretel = derive2 { name="gretel"; version="0.0.1"; sha256="1yyj4aing56f2vy0gshxwb623g9idg8k4701v3s53lqn4m2ybazk"; depends=[Rcpp ResistorArray]; }; grex = derive2 { name="grex"; version="1.9"; sha256="0s6nan76rrmh3yhgvzb7pqdrzx2w9px8ay4v9yiib4bamy9wmhpb"; depends=[]; }; - greybox = derive2 { name="greybox"; version="0.5.7"; sha256="1igx5lv0li3j5kaz70255fbh8w3icnvvqcqifr381q1jbhv3zal1"; depends=[forecast lamW nloptr numDeriv Rcpp statmod]; }; + greybox = derive2 { name="greybox"; version="0.5.8"; sha256="0qr7l0chq77m4jysfvdhsy683vvziw1499lcmjwlq63fcblpbfiy"; depends=[forecast lamW nloptr numDeriv Rcpp statmod]; }; greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; }; - grf = derive2 { name="grf"; version="1.0.1"; sha256="0m2r60w5w1c2h3rnia0zxbdvn2mrixq7p4qcw54lv491lyyxl0my"; depends=[DiceKriging lmtest Matrix Rcpp RcppEigen sandwich]; }; + grf = derive2 { name="grf"; version="1.1.0"; sha256="0bm5r26iabpk2yjln5i14vlcv3kg3p9n8sv9q1xm9v33j0qda507"; depends=[DiceKriging lmtest Matrix Rcpp RcppEigen sandwich]; }; gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; }; gridBezier = derive2 { name="gridBezier"; version="1.1-1"; sha256="1n5d6svxblcxpzf79px0qjxsydpwjpnfcagnwk35ljinyd0wv68z"; depends=[]; }; gridDebug = derive2 { name="gridDebug"; version="0.5-0"; sha256="12zrl7p8p7071w5viymdipycja7a2arvy0aahgahd5nlx1k1gha0"; depends=[graph gridGraphviz gridSVG]; }; gridExtra = derive2 { name="gridExtra"; version="2.3"; sha256="0fwfk3cdwxxim7nd55pn7m31bcaqj48y06j7an2k1v1pybk0rdl1"; depends=[gtable]; }; gridGeometry = derive2 { name="gridGeometry"; version="0.2-0"; sha256="0y7y1ld03cqpibmjssid6n3n8gf98hi9ngcfbkh6acyzck812bc7"; depends=[polyclip]; }; - gridGraphics = derive2 { name="gridGraphics"; version="0.4-1"; sha256="1kr3p54bkv2q7agxrva30y9bkwkiq1k2cfl5z1kvyjv6f5xi4w5p"; depends=[]; }; + gridGraphics = derive2 { name="gridGraphics"; version="0.5-0"; sha256="0rlyc3xk8kfrfzbfd8n4javq3yxqd7lsfmi4q5n6s61srnrl6c1r"; depends=[]; }; gridGraphviz = derive2 { name="gridGraphviz"; version="0.3"; sha256="1jz0d6kc8ci55ffm6dns8bhak9xnaq7mg5mpv3fk53lircn7mwl5"; depends=[graph Rgraphviz]; }; gridSVG = derive2 { name="gridSVG"; version="1.7-1"; sha256="03ra820lm0gydrvxmck658aaj3mqqkqrinxc134r5npl8bv4x2hg"; depends=[jsonlite XML]; }; gridsample = derive2 { name="gridsample"; version="0.2.1"; sha256="062aryy26x07m31r6m0fj1zgnjhivlh1fikx9lv2rdgk0rh4yzz0"; depends=[data_table geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; }; gridsampler = derive2 { name="gridsampler"; version="0.6"; sha256="0wqpqg9c372sv8zqks6v93gawiyfghw58hn7m8q45dxpqm16ss3k"; depends=[BiasedUrn ggplot2 plyr reshape2 shiny shinyBS shinythemes]; }; - gridtext = derive2 { name="gridtext"; version="0.1.0"; sha256="1fk1ywb088fr1cyfjjsc1qrrvpn6khb3vv8ilxss0d2nclx6zkar"; depends=[jpeg markdown png Rcpp RCurl rlang stringr testthat xml2]; }; + gridtext = derive2 { name="gridtext"; version="0.1.1"; sha256="06rb3xn8zf9m1v8kam39a7cp6iaw4xpirwjvp0y99gx3q5ijf5d7"; depends=[jpeg markdown png Rcpp RCurl rlang stringr testthat xml2]; }; gripp = derive2 { name="gripp"; version="0.2.20"; sha256="0rshipm8rdynl19a4dsvvvlhkd0n4vjfkidwnv5iilc5ini7c4qr"; depends=[GA GenSA usethis]; }; grnn = derive2 { name="grnn"; version="0.1.0"; sha256="1dxcmar42g9hz4zlyszlmmnnsnja0gxfggav5jxv0gkp32rkd0wh"; depends=[]; }; - groc = derive2 { name="groc"; version="1.0.6"; sha256="0x7rrf5bw05s257xhzklpc6hslpjnzjx02hlrz4r9zixbfffmawc"; depends=[MASS mgcv pls robust robustbase rrcov]; }; + groc = derive2 { name="groc"; version="1.0.7"; sha256="1qi16br426z90d58130n47riy7q1lcq19zl585a001av4lrmmqzv"; depends=[MASS mgcv pls robustbase rrcov]; }; gromovlab = derive2 { name="gromovlab"; version="0.7-6"; sha256="02s7x23610dbpmrqh7pimspa10v3fnmj48fwmh0a6igd74rmj2mg"; depends=[ape cluster glpkAPI igraph quadprog]; }; groupICA = derive2 { name="groupICA"; version="0.1.1"; sha256="1wl828ligvvw55xic383gdn7aq4mbwsnkl4ym6f71jn5g3p36d0i"; depends=[MASS]; }; groupRemMap = derive2 { name="groupRemMap"; version="0.1-0"; sha256="1bfp746j0dx7kk44nyjqmimvgw14par9ayvqxnzldc05qsazjdwx"; depends=[]; }; - groupdata2 = derive2 { name="groupdata2"; version="1.1.2"; sha256="0v206sq4h50v1scb2i8qwwi3kxiqamxwrnn1gblwk9i3xkmqs48y"; depends=[dplyr numbers plyr rlang tibble]; }; + groupdata2 = derive2 { name="groupdata2"; version="1.2.0"; sha256="119ianzcv5dwvdyfxmgm7qgv99zbanm1ikal0rxc70c5n5lagv83"; depends=[checkmate dplyr lifecycle numbers plyr rlang tibble]; }; grouped = derive2 { name="grouped"; version="0.6-0"; sha256="1glxgacpwk7yjbkwg5ci6bmb2il6hf5zhydwi5bbq6hc032m9976"; depends=[MASS]; }; - groupedSurv = derive2 { name="groupedSurv"; version="1.0.4"; sha256="106z47icn680nyzj9gkq7g8gv73ajgmx0ypiv4l1j01cd3nripj2"; depends=[BH doParallel doRNG foreach qvalue Rcpp RcppEigen]; }; - groupedstats = derive2 { name="groupedstats"; version="0.1.1"; sha256="0fp073mf2qghi4l1jfr41r1b7n0h3zaa96q7wk7xwi3a3d7vs152"; depends=[broomExtra dplyr glue haven lme4 parameters purrr rlang rstudioapi sjstats skimr tibble tidyr]; }; + groupedSurv = derive2 { name="groupedSurv"; version="1.0.4.1"; sha256="1kapz07hswpcvm9mmgc06l71f7ymx7aq816mzwca6cvccvqnrl5n"; depends=[BH doParallel foreach qvalue Rcpp RcppEigen]; }; + groupedstats = derive2 { name="groupedstats"; version="0.2.1"; sha256="14vfiwwamhbb4cig5irrnx0yy769fd0p5lvxq4y0kx5ah3hi12yy"; depends=[broomExtra dplyr glue haven ipmisc lme4 parameters purrr rlang sjstats skimr tibble tidyr]; }; groupsubsetselection = derive2 { name="groupsubsetselection"; version="1.0.3"; sha256="118cj5xc8nbq4fs2gbzg1nhynixaflbl0si77gyy4ybw0drsz4nj"; depends=[]; }; grove = derive2 { name="grove"; version="1.1"; sha256="0fqsj5dx7py7cin3hvfkxglh8v3x0dwj6cxy4h5vbddjl687db5x"; depends=[Rcpp RcppArmadillo wavethresh]; }; growfunctions = derive2 { name="growfunctions"; version="0.14"; sha256="1pvyiw20fxm3l4giyq4iizc67yy36i6wq4ch2qyqg4mfd4bki2g4"; depends=[ggplot2 mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; growth = derive2 { name="growth"; version="1.1.1"; sha256="05yxjlbv1i4ly8yp3aqbxzq1z2mp7sfx7xyqw48qsdv0acqai7jy"; depends=[rmutil]; }; - growthPheno = derive2 { name="growthPheno"; version="1.0-21"; sha256="1lhzf1i1k786c6j0vn3ay6mnmk3bh7xhymq2ywwjz228hszn1bf2"; depends=[dae GGally ggplot2 Hmisc RColorBrewer readxl reshape]; }; + growthPheno = derive2 { name="growthPheno"; version="1.0-22"; sha256="0xhy6w8xcyavb10z5qnzc2bfzn158vmajrcm318s4afwm1ynqix5"; depends=[dae GGally ggplot2 Hmisc RColorBrewer readxl reshape]; }; growthcurver = derive2 { name="growthcurver"; version="0.3.0"; sha256="0q7g00b9sxxlq8yscmmccr8r4mwzpc707arbrr46iii8ra9icvlb"; depends=[minpack_lm]; }; growthmodels = derive2 { name="growthmodels"; version="1.2.0"; sha256="1wy5z77819s3daa0mifafcjfkggsq0ac522yagj86ml3vf7yqppj"; depends=[]; }; growthrate = derive2 { name="growthrate"; version="1.3"; sha256="1ak3yqlm7dnkdjlmikwa57qnf7yd9n1ixz36gv3shr252750x9cd"; depends=[clime Matrix mvtnorm]; }; @@ -8570,9 +8584,7 @@ in with self; { grpSLOPE = derive2 { name="grpSLOPE"; version="0.2.1"; sha256="1r9irf83f7szhkdqis2rakil8fsr3rqsfrj4dmbg3r3rnr8wl8nh"; depends=[SLOPE]; }; grplasso = derive2 { name="grplasso"; version="0.4-6"; sha256="0xr6plgnc3lp93rd4jk4dqjix8kgl8s2b68fh41k6jwd5y8d7pks"; depends=[]; }; grplassocat = derive2 { name="grplassocat"; version="1.0"; sha256="0pi5vq7yqg0ha91y6296ckshxyq3135cg6zcs9x6xba5m5024k4p"; depends=[grplasso]; }; - grpreg = derive2 { name="grpreg"; version="3.2-1"; sha256="126b2gblclp62xv8r54lqg3crd3317bqacr70whmhnadlwcpgqvb"; depends=[Matrix]; }; - grpregOverlap = derive2 { name="grpregOverlap"; version="2.2-0"; sha256="1kq8wxpx21irwckndgfkzdy5jgzf7pmcwpclmjzjxznv6cyaikd0"; depends=[grpreg Matrix]; }; - grpss = derive2 { name="grpss"; version="3.0.1"; sha256="01bjjhv3vkvn5h363g5a9dlm7kzq10q7ixmrc0kkq5hsbs31vl3x"; depends=[doParallel foreach grpreg MASS]; }; + grpreg = derive2 { name="grpreg"; version="3.2.2"; sha256="12432rdyv6b837n3b6kwjrqsmx7bs6qdmyz02x4l956pwmp5g7z5"; depends=[Matrix]; }; grr = derive2 { name="grr"; version="0.9.5"; sha256="0arbcgrvhkwb5xk4nry1ffg2qj0v8ivhjghdr505ib4357g0c9i9"; depends=[]; }; grt = derive2 { name="grt"; version="0.2.1"; sha256="1dw5rjs82r82l6qryyyq9cczm770v4iv60d7pi1nb4b0733ndbd5"; depends=[MASS]; }; gsDesign = derive2 { name="gsDesign"; version="3.0-1"; sha256="0cixg176ihbkwkcllabr2klc15cssdnfzwklf0q1wd23lmv6aj43"; depends=[ggplot2 plyr xtable]; }; @@ -8580,17 +8592,17 @@ in with self; { gsalib = derive2 { name="gsalib"; version="2.1"; sha256="1k3zjdydzb0dfh1ihih08d4cw6rdamgb97cdqna9mf0qdjc3pcp1"; depends=[]; }; gsarima = derive2 { name="gsarima"; version="0.1-4"; sha256="1ay3iamnvg7mbnl1xaxxcyic559bdnfspy883w2bwgy20yhr34yg"; depends=[MASS]; }; gsbDesign = derive2 { name="gsbDesign"; version="1.0-1"; sha256="0wb62y4fcca1qq27kgk59qxm1nx5njcs94cr8x1bsnk88z945p9p"; depends=[gsDesign lattice]; }; + gsbm = derive2 { name="gsbm"; version="0.1.0"; sha256="0slx4063fnys60mxa9gqdmza9h9pif3qqyjw7y5nfcm8p06ckdbn"; depends=[softImpute]; }; gscaLCA = derive2 { name="gscaLCA"; version="0.0.2"; sha256="0s6rnyd632xq04pnyq1j3571qv7j5bzxir2nhk5jk9i8myf9fc9k"; depends=[devtools doSNOW fastDummies fclust foreach ggplot2 gridExtra MASS progress psych stringr]; }; gscounts = derive2 { name="gscounts"; version="0.1-3"; sha256="1xcsvnam858l9am30mmqb6m0vcflijhli22ix8g56rcvfsh208q1"; depends=[Rcpp]; }; gset = derive2 { name="gset"; version="1.1.0"; sha256="1gingqw6la8n7mnl47wpz9sicxca4zi2m8p35n6cnihrniibhajc"; depends=[Hmisc MCMCpack mvtnorm]; }; - gsg = derive2 { name="gsg"; version="2.0"; sha256="17fjl7aw1s814krnszxd4y1d4210bnkrf4kb2fwsycqwcwms5pm7"; depends=[boot mgcv mvtnorm numDeriv]; }; gsheet = derive2 { name="gsheet"; version="0.4.2"; sha256="1mfpg91855qg0bi6wk0wy58b58lm06jw9fqdl6psqdvnmaf7n2w5"; depends=[httr stringr]; }; gskat = derive2 { name="gskat"; version="1.0"; sha256="19mbif7wr88vk5wlc7m2l4xghjmfj2qd3s8yvjlkawbnjk8x6ib0"; depends=[CompQuadForm e1071 gee geepack Matrix]; }; gsl = derive2 { name="gsl"; version="2.1-6"; sha256="0p4rh7npp6qbfc5sxjq86xjn7c9ivf3pd60qf1hldwckjqin7m7m"; depends=[]; }; gsloid = derive2 { name="gsloid"; version="0.1.0"; sha256="1ma5si86ynfsis0pnw8hyv6xc4frbkhy5ks03mr0z16gasffkycg"; depends=[]; }; gsmoothr = derive2 { name="gsmoothr"; version="0.1.7"; sha256="00z9852vn5pj04dhl3w36yk0xjawniay6iifw1i7fd8g98mgspxp"; depends=[]; }; gsrsb = derive2 { name="gsrsb"; version="1.1.1"; sha256="0yjxzc69ihsx5ni6jb4shsvl9vskqlls3gmpckmzx5nsh1l5s5vb"; depends=[ldbounds mvtnorm xtable]; }; - gss = derive2 { name="gss"; version="2.1-10"; sha256="1qhywsn9244fc7ir705xc8s832ygd7w0j72k3d58bdx9wv57xi16"; depends=[]; }; + gss = derive2 { name="gss"; version="2.1-12"; sha256="02qpxx8lwkxsxv3xhkkxgpsj7i5nqaqs04afd2aby7b746v2pjdw"; depends=[]; }; gstar = derive2 { name="gstar"; version="0.1.0"; sha256="1582f7jcphb32j3wdc345qa5sgm2xyimlc6r5r5jay7ca5ll8c98"; depends=[dplyr ggplot2 reshape2 xts zoo]; }; gstat = derive2 { name="gstat"; version="2.0-4"; sha256="0sksk3a08bx70h8230ca7sz8jhwp37f4d34igh192668vz0cvljp"; depends=[FNN lattice sp spacetime zoo]; }; gsubfn = derive2 { name="gsubfn"; version="0.7"; sha256="00j6b8b6xsx6v370h220x233rpk6asca78165y3d48jpwvwisdc9"; depends=[proto]; }; @@ -8601,15 +8613,16 @@ in with self; { gtable = derive2 { name="gtable"; version="0.3.0"; sha256="1lyncxf2dqdjgw1071cn9c8zwzkz6sldnd5cgmicf70bc726qf7x"; depends=[]; }; gtcorr = derive2 { name="gtcorr"; version="0.2-1"; sha256="1n56zmyv58jwr95p453jb86j82pdnq57gfc8m15jndjc9p31zl0m"; depends=[]; }; gte = derive2 { name="gte"; version="1.2-2"; sha256="1x528iakyjhh4j92cgm6fr49a3rdi4cqy28qhsfr2dwvxzxchl6h"; depends=[survival]; }; + gtfs2gps = derive2 { name="gtfs2gps"; version="1.0-5"; sha256="0m58plnkihffgrdm14lqv4i91jg500z3hfaiq49y25jbkpl53ai6"; depends=[data_table furrr future lwgeom magrittr pbapply purrr Rcpp sf sfheaders units]; }; gtfsrouter = derive2 { name="gtfsrouter"; version="0.0.1"; sha256="0znr0hw6f8wxy3vj944lrlsb0a70w2p20gw50jr2ij9xikawh2ih"; depends=[data_table Rcpp]; }; gtheory = derive2 { name="gtheory"; version="0.1.2"; sha256="1xc1jl69z5csalqk3hx83s53awcl1fjq6p0x2pczhs7dsvwd6lks"; depends=[lme4]; }; gtools = derive2 { name="gtools"; version="3.8.1"; sha256="0f5syk1qq6cjq6hwymvkiyhzwa389z94722v881ipbfqkd2q8505"; depends=[]; }; gtop = derive2 { name="gtop"; version="0.2.0"; sha256="1nvvbf181x0miw3q0r2g0nklz29ljdsd07cazaajfls7pmhi0xw9"; depends=[hts lassoshooting quadprog]; }; gtrendsR = derive2 { name="gtrendsR"; version="1.4.4"; sha256="0b05m5jbgbhdjmwp89zaa276z1h2qib2h30msg69lhwbdcsva96q"; depends=[anytime curl ggplot2 jsonlite]; }; - gtsummary = derive2 { name="gtsummary"; version="1.2.4"; sha256="0sn05c68p74zk90j3zxj9jqa1aim28ydqlw3gfn8j4h72pnklyv0"; depends=[broom broom_mixed crayon dplyr glue knitr lifecycle magrittr purrr rlang stringr survival tibble tidyr tidyselect usethis]; }; - gtx = derive2 { name="gtx"; version="0.0.8"; sha256="0x71jji2yldi9wpx8d3nldbjfj4930j7zcasayzbylf9094gmg26"; depends=[survival]; }; + gtsummary = derive2 { name="gtsummary"; version="1.2.6"; sha256="12ah610w1ry69rwlxdj3qq1hhcgsgmqq1wbh6bd6w48s389929y1"; depends=[broom broom_mixed crayon dplyr forcats glue knitr lifecycle magrittr purrr rlang stringr survival tibble tidyr tidyselect usethis]; }; guardianapi = derive2 { name="guardianapi"; version="0.1.1"; sha256="17xmmr6pfzhdnmf45jzvk84gbfnmlw1qfv1gqjaw85vgm8b6jn6l"; depends=[dplyr httr jsonlite rlang tibble]; }; guess = derive2 { name="guess"; version="0.1"; sha256="198pxi0yipgm9wccpj3y4a0gkibhyxcmb7v5dz7ipzrk44ha5g6j"; depends=[Rsolnp]; }; + guf = derive2 { name="guf"; version="1.0.2"; sha256="1dfmja2da211pcid4hr7x9q0sgz37756rpykm1ax862avdl8hsmc"; depends=[]; }; gumbel = derive2 { name="gumbel"; version="1.10-2"; sha256="0s9idcrssnl683abwky9zvqylciy0b51z935yfvb2bm8b0b0b4ij"; depends=[]; }; gunit = derive2 { name="gunit"; version="1.0.0"; sha256="0vmm47f21n9f334aj38gzrmv1c4sp76njk95ld9gv6fcfxgsipyh"; depends=[magrittr stringr tibble units]; }; gunsales = derive2 { name="gunsales"; version="0.1.2"; sha256="02vz16lhym72vvf48yai1g371wygdlmi63a6ylc147l0b69jgw31"; depends=[data_table dplyr ggplot2 seasonal x13binary zoo]; }; @@ -8625,12 +8638,13 @@ in with self; { gwfa = derive2 { name="gwfa"; version="0.0.4"; sha256="0jz82d9lfyd07z0jjlfqzsg7a3vnyz0s1j0rrb5sg9pnvcfjk9qy"; depends=[Rcpp sp]; }; gwrpvr = derive2 { name="gwrpvr"; version="1.0"; sha256="0x15nv2pfv99c04lgs6q6hgczarld34xc4aqw9bn179m7j02v6m3"; depends=[]; }; gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; }; + gwsem = derive2 { name="gwsem"; version="0.1.15"; sha256="13h28yqj9hassi3frwpjh41kawgbsv5idvdx8mxglisig8ya72dc"; depends=[BH data_table lifecycle OpenMx qqman Rcpp]; }; gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; - gyriq = derive2 { name="gyriq"; version="1.0.2"; sha256="12vbnhianzi4l43czaxrbnbkz1h8lvmwjys0y3c2ml3g6dmwwfji"; depends=[CompQuadForm irlba mvtnorm survival]; }; - h2o = derive2 { name="h2o"; version="3.28.0.2"; sha256="1975898p9bh61qa01aqzdkxjcnblgbkn0ld7das9ibav4w5jjva5"; depends=[jsonlite RCurl]; }; + h2o = derive2 { name="h2o"; version="3.28.0.4"; sha256="1nsbw4fbwizj30y0qvw8ln078ayaisl4zydjx9917hlsbc8wc3aq"; depends=[jsonlite RCurl]; }; h2o4gpu = derive2 { name="h2o4gpu"; version="0.2.0"; sha256="06d2rrr27xvnsai6zjiaiw0jjfzdza1cc39c03d6pjkvnh0mqh2c"; depends=[magrittr reticulate]; }; hBayesDM = derive2 { name="hBayesDM"; version="1.0.2"; sha256="04p4d0hy2l6bmxyh2k5q0g19b7fbpsl9frmcvrf5rxkaasxyxwn6"; depends=[BH data_table ggplot2 loo Rcpp RcppEigen rstan StanHeaders]; }; hIRT = derive2 { name="hIRT"; version="0.2.0"; sha256="1vgmr36dbcn2ah9pzhc46zh1va7y7w3zr4mpmyf626m1bq0alb39"; depends=[pryr rms]; }; + hJAM = derive2 { name="hJAM"; version="1.0.0"; sha256="1pnjcn54zi4d7h9zc9wr1gv51dzb0vasfcrw4c1kqymhxsq2yfh3"; depends=[dplyr ggplot2 ggpubr reshape2]; }; hNMF = derive2 { name="hNMF"; version="0.9"; sha256="0qavavgiqah4dv0gz8v5ssz637sd341n9s0pyc232n2jhqpzl0cz"; depends=[MASS NMF nnls oro_nifti R_matlab rasterImage spatialfil]; }; hR = derive2 { name="hR"; version="0.2.1"; sha256="1y0rzcrxb21fhxnpvhijxg0syhj8n20882cy79g5x4rv4xrngw1z"; depends=[data_table data_tree knitr rhandsontable shiny]; }; hSDM = derive2 { name="hSDM"; version="1.4.1"; sha256="1jwqjzr0zpckzh2jpqh17v6ypq4mzn5khlv6p37y59zz8bh9mvxp"; depends=[coda]; }; @@ -8639,6 +8653,8 @@ in with self; { hackeRnews = derive2 { name="hackeRnews"; version="0.1.0"; sha256="0vrdbk4dxbykb3hs35nxkl3s2ds92gs5qz66p85w8j5zjmwbw2x6"; depends=[future_apply httr jsonlite tibble]; }; hagis = derive2 { name="hagis"; version="3.0.1"; sha256="1bljpva3j7x87hdmy8s9sh37r5vd8wkjzjqbk57akl654x6b0gfv"; depends=[data_table ggplot2 pander]; }; hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; }; + hal9001 = derive2 { name="hal9001"; version="0.2.5"; sha256="16pzcjk0d7kvj3f8dxxzz5sjcsa6m5axc8rb29vxpmg54kyqypys"; depends=[assertthat glmnet Matrix origami Rcpp RcppEigen]; }; + haldensify = derive2 { name="haldensify"; version="0.0.5"; sha256="02bmch7impx5cyv7nifhqln2ppk1qyyzr8w6my77p18wx52h1d4l"; depends=[assertthat data_table future_apply ggplot2 hal9001 origami Rdpack]; }; halfcircle = derive2 { name="halfcircle"; version="0.1.0"; sha256="1gbqbv3cn8w09i3f2ji3qq0snb4fy9243y12agw686fx46dfmhxs"; depends=[scales]; }; hamlet = derive2 { name="hamlet"; version="0.9.6"; sha256="076fh28grlrv38qywshi79m84jsz1ck9k4n0rg4svvr3gqkdbcn2"; depends=[]; }; handlr = derive2 { name="handlr"; version="0.2.0"; sha256="1p14q9swvy8yvd52wcms777vfcb9vandi0pd4cmqmyz1hpsi31d8"; depends=[crul jsonlite mime RefManageR urltools xml2]; }; @@ -8650,18 +8666,17 @@ in with self; { haploR = derive2 { name="haploR"; version="3.0.1"; sha256="162wqjpmgapy54n8msrw5apgzj586ps0kkc5wmbqay3l94xgnvzk"; depends=[DT httr plyr RCurl RUnit tibble XML]; }; haploReconstruct = derive2 { name="haploReconstruct"; version="0.1.2"; sha256="17zdl9c3yy6jdzv1wp0ailbga456pmmybzxh3dldymhj8qf32cx0"; depends=[data_table dbscan foreach gplots igraph matrixStats stringi zoo]; }; haplotyper = derive2 { name="haplotyper"; version="0.1"; sha256="0pcshlh29c4zazhkcq4371kqh9inrbx494y5a1qb1k2c92fkax31"; depends=[]; }; - haplotypes = derive2 { name="haplotypes"; version="1.1"; sha256="0qnsrjzanyyiar8zpmwvfks3gj7cl8libnyg8bx983p25jwifcwl"; depends=[ape network pegas phangorn plotrix sna]; }; + haplotypes = derive2 { name="haplotypes"; version="1.1.2"; sha256="07grdwli0kxnnnf7mg8z7gjpny88h71vf867g50f08yybgb46y70"; depends=[ape network phangorn plotrix sna]; }; happybiRthday = derive2 { name="happybiRthday"; version="0.0.1"; sha256="0rrvi5kx09p74xwxvqcwibbh4qjlk4jxb89grx74chjxk9ak2yv8"; depends=[data_table dplyr gh lubridate tidyr]; }; happytime = derive2 { name="happytime"; version="0.1.0"; sha256="03iblwb6w2dh9sibfi4nlswidck13hzsn7123838zp4sxfnrp041"; depends=[]; }; hapsim = derive2 { name="hapsim"; version="0.31"; sha256="0jw6iw89d4y8wjy58biv40szp123ql7frz1mmdjdxljmwaby963h"; depends=[MASS]; }; - hardhat = derive2 { name="hardhat"; version="0.1.1"; sha256="06l4zcqz76c2m9lxa5d6wqcbq1xkkxk0wynka09y5fyh9q82c0g6"; depends=[glue rlang tibble vctrs]; }; + hardhat = derive2 { name="hardhat"; version="0.1.2"; sha256="1fhs6inbjh7kdv6jamibpb2fccysg1k0w99hbdwhrc5yyljpqfil"; depends=[glue rlang tibble vctrs]; }; harmonicmeanp = derive2 { name="harmonicmeanp"; version="3.0"; sha256="17irfw8788yhh36698p9w8wab6wcin1yzfinlbs3gdg70d42zcnd"; depends=[FMStable]; }; harrietr = derive2 { name="harrietr"; version="0.2.3"; sha256="0n6vsqysj4ijh06z6nqmj8x1z4w9711dxhbfp8p8fwi0l75pj0cj"; depends=[ape dplyr ggtree lazyeval magrittr rlang tidyr]; }; - harrypotter = derive2 { name="harrypotter"; version="2.1.0"; sha256="151kpg47b1hyv6rc3cksykqw8pz0xqm0q9xf9sxa2w14ibymvc8k"; depends=[ggplot2 gridExtra]; }; + harrypotter = derive2 { name="harrypotter"; version="2.1.1"; sha256="1j3sv0rpp4lcrf09j4a3an4lkwi2x1z18iv62fk6c2kpp9b14b8r"; depends=[ggplot2 gridExtra]; }; hash = derive2 { name="hash"; version="2.2.6.1"; sha256="0b3fl0rvgwb992knl81vm99lsldg5clvaqjh6mamm6zqmb6dz056"; depends=[]; }; hashFunction = derive2 { name="hashFunction"; version="1.0"; sha256="1v57xj8xwv6xhxvgp0zxgvs5vcjw8z5k2ciwbn0jxf4ilyd66cgj"; depends=[]; }; hashids = derive2 { name="hashids"; version="0.9.0"; sha256="0233qly4rb1g4znxm9h9h8gskzrjyav6nd26xkdl7990m5hcbcwh"; depends=[]; }; - hashmap = derive2 { name="hashmap"; version="0.2.2"; sha256="1qypmyi033rjxjk055rv94qfqa99gm5hj5gfd9fiiq1xln3z700j"; depends=[BH Rcpp]; }; hashr = derive2 { name="hashr"; version="0.1.0"; sha256="1ri2zz2l1rrc1qmpqamzw21d9y06c7yb3wr60izw81l8z4mmyc3a"; depends=[]; }; hasseDiagram = derive2 { name="hasseDiagram"; version="0.1.3"; sha256="1r9z6jc9lbdj2xc81gpnbswrl8rhs8zrlsnypfrny40g3j402iap"; depends=[graph Rgraphviz]; }; haven = derive2 { name="haven"; version="2.2.0"; sha256="0g9d6mxqmrw2zdms78jpx2sx73pczlyy771v1h5hmxqz9sqyk7hr"; depends=[forcats hms Rcpp readr rlang tibble tidyselect]; }; @@ -8695,11 +8710,11 @@ in with self; { hdpca = derive2 { name="hdpca"; version="1.1.3"; sha256="09h96wm6r6w1imkm4k9bg5l0vcq2yvbp6iqx786x99ds8jzppsb9"; depends=[boot lpSolve]; }; hdrcde = derive2 { name="hdrcde"; version="3.3"; sha256="0c2qbw4c3mq1cb068kjs72rxlbibz8svwcrx853jyr8ybs23z7ab"; depends=[ash ggplot2 KernSmooth ks locfit RColorBrewer]; }; hds = derive2 { name="hds"; version="0.8.1"; sha256="1smg5ixrl7f2x3wn7s5i26dyadn5sigpf4jsk236z1bhnz617ax4"; depends=[survival tensor]; }; - healthcareai = derive2 { name="healthcareai"; version="2.3.0"; sha256="0lyx9fldw28gx2lr2cpi7lyrwf5qz549v2vqxjx83ih5kxm6mlnp"; depends=[caret cowplot data_table dbplyr dplyr e1071 forcats generics ggplot2 glmnet lubridate MLmetrics purrr ranger recipes rlang ROCR stringr tibble tidyr xgboost]; }; + healthcareai = derive2 { name="healthcareai"; version="2.4.0"; sha256="04bv187agpmzb1igfdjb4naqlpffp4za7skb75xxr2hb1rcgcdvw"; depends=[caret cowplot data_table dplyr e1071 generics ggplot2 glmnet lubridate MLmetrics purrr ranger recipes rlang ROCR stringr tibble tidyr xgboost]; }; healthforum = derive2 { name="healthforum"; version="0.1.0"; sha256="13ih00amv9hrpngm6pxc8vzqzhx8c0yqgaprxdcp5li90lg5r3av"; depends=[magrittr purrr rvest stringr tokenizers xml2]; }; heatex = derive2 { name="heatex"; version="1.0"; sha256="0c7bxblq24m80yi24gmrqqlcw8jh0lb749adsh51yr6nzpap6i9n"; depends=[]; }; heatmap_plus = derive2 { name="heatmap.plus"; version="1.3"; sha256="0rzffm15a51b7l55k0krk6w7v8czy3vpwz1qmbybr7av0pln7wn3"; depends=[]; }; - heatmap3 = derive2 { name="heatmap3"; version="1.1.6"; sha256="13aa9rd16k67b1fr6471bdz2a1i04k7279ck1i4rjdly9rbksnjx"; depends=[fastcluster]; }; + heatmap3 = derive2 { name="heatmap3"; version="1.1.7"; sha256="1gdjc5b4f4nf5zpfdl0ch352p3bwbcw5hkd5vlarxvb2qkf9pcxs"; depends=[fastcluster]; }; heatmapFit = derive2 { name="heatmapFit"; version="2.0.4"; sha256="1rswp1wp58f21fpyjybcvvmnn53kr54ij83hp05qbvl7yn1fsnrb"; depends=[]; }; heatmaply = derive2 { name="heatmaply"; version="1.0.0"; sha256="0576gml3bcl7r1biigzj1rag2xzz422knbw7arc8d2gsakjj757g"; depends=[assertthat colorspace dendextend egg ggplot2 htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; heatwaveR = derive2 { name="heatwaveR"; version="0.4.2"; sha256="1fp38vlb4646jg397gsxmf5ws15grmmg6hdzijwll5zsg6a9xhg4"; depends=[data_table dplyr ggplot2 lubridate plotly Rcpp RcppArmadillo RcppRoll tibble zoo]; }; @@ -8708,6 +8723,7 @@ in with self; { hedgehog = derive2 { name="hedgehog"; version="0.1"; sha256="1mvjnm2zlc4pvw9vnhxr0dj1g1sfqvlrnnhcipzfbvr147yan9l5"; depends=[rlang testthat]; }; heemod = derive2 { name="heemod"; version="0.11.0"; sha256="0zzjq4cmyr25p4x91jw542jiqmds6qikbp8gyix34dcmk765drnk"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr rlang tibble]; }; heims = derive2 { name="heims"; version="0.4.0"; sha256="0vnq31jwn09grni4gdhf1hzd87b62as4f65b2qw7ky6mi38ahr5d"; depends=[bit64 data_table fastmatch hutils lubridate magrittr]; }; + helda = derive2 { name="helda"; version="1.0.1"; sha256="1qfnqa94csq7c67prpmyvnkkzbylv4cq4zsmici9c19s9yw4kf76"; depends=[dplyr ggplot2 rlang sqldf stringr]; }; helixvis = derive2 { name="helixvis"; version="1.0.1"; sha256="113rnpnrcnw18ks78fgq79zdrw3kmpzpimlc45gvj0za2fbyci3p"; depends=[ggforce ggplot2 rlang]; }; hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; }; helloJavaWorld = derive2 { name="helloJavaWorld"; version="0.0-9"; sha256="1a8yxja54iqdy2k8bicrcx1y3rkgslas03is4v78yhbz42c9fi8s"; depends=[rJava]; }; @@ -8715,35 +8731,35 @@ in with self; { helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; }; heplots = derive2 { name="heplots"; version="1.3-5"; sha256="1vyhfkp66gi17jni3gsbv9kn1s0n00qigr13q8xbzbgylz5jjiln"; depends=[car MASS]; }; here = derive2 { name="here"; version="0.1"; sha256="1vb5dxqdpimy51q1gjsypyq14p2hhvj7wsvh6g35pj1g03cyg9av"; depends=[rprojroot]; }; - hereR = derive2 { name="hereR"; version="0.3.0"; sha256="119py0lpbnc03v2md3wg5pbq7kz40rw82jhmc529i6hkz4qf65js"; depends=[curl data_table jsonlite lwgeom sf stringr]; }; + hereR = derive2 { name="hereR"; version="0.3.1"; sha256="0n1ml3724lkxir7baaf3zhsvw5rlsqy4zvb16lrp9dizkiqqnjxk"; depends=[curl data_table jsonlite lwgeom sf stringr]; }; heritability = derive2 { name="heritability"; version="1.3"; sha256="0a0pw8hppkgypl4jaa38hks9nxfwz2zbsd4w6w40j1hxlyy4km8m"; depends=[MASS]; }; hermite = derive2 { name="hermite"; version="1.1.2"; sha256="0j9s7ayvbvmgwybrvf703b72qbn8gskb105pis19ig2sslllzda3"; depends=[maxLik]; }; hero = derive2 { name="hero"; version="0.4.7"; sha256="129v2pjbxm5aalr5lfx0kh20rhwksnb80pc459pxg0xkwxvy1l3d"; depends=[fields Matrix optimx pbapply rgeos sp]; }; - hesim = derive2 { name="hesim"; version="0.2.2"; sha256="1wchccw9761iz0sk5sd8ahdzpphrd4k9rmgg8f9cgp43aza68ic2"; depends=[data_table flexsurv MASS R6 Rcpp RcppArmadillo survival]; }; + hesim = derive2 { name="hesim"; version="0.2.3"; sha256="1x4bhg2rmp8vf0fhpnj7pkfaywcss203c9n23b43hafzy5pkcd6w"; depends=[data_table flexsurv MASS R6 Rcpp RcppArmadillo survival]; }; het_test = derive2 { name="het.test"; version="0.1"; sha256="08kxp81dx32anh0k5b65x7w7madwnn9hiabdrk6ck6b6mx37x26v"; depends=[vars]; }; hetGP = derive2 { name="hetGP"; version="1.1.2"; sha256="0r7hzw6ccyrqpq51adljd2ljv9dl00c0dr8frjrhibpzpc68z3sz"; depends=[DiceDesign MASS Rcpp]; }; hett = derive2 { name="hett"; version="0.3-2"; sha256="1kmspw0738pdall5scmllsa79dynliai2glk1h5rzm4030r5rd6j"; depends=[lattice MASS]; }; hettx = derive2 { name="hettx"; version="0.1.1"; sha256="0zfxg88l83pzj37c5khpv4vi0v28fdnp0p8yz39scm8d8lya1dkm"; depends=[doParallel dplyr foreach formula_tools MASS moments mvtnorm plyr purrr quantreg tidyverse]; }; heuristica = derive2 { name="heuristica"; version="1.0.2"; sha256="1wqdwggnma6p667ivr0xja4vvn3jgzbkc5whkkijmdmxpjzg1wz6"; depends=[Hmisc]; }; - heuristicsmineR = derive2 { name="heuristicsmineR"; version="0.2.1"; sha256="0zpkkz20jlppdvsxcxs0w2n79af21ry1vvmbqlm1scgkr86674yd"; depends=[BH bupaR data_table DiagrammeR dplyr ggplot2 ggthemes magrittr petrinetR processmapR purrr Rcpp rlang scales tidyr]; }; + heuristicsmineR = derive2 { name="heuristicsmineR"; version="0.2.2"; sha256="0pwr2n172571y7c8wyia4a3sqnr6m1cn17yf4iznr9v4jddkb20h"; depends=[BH bupaR data_table DiagrammeR dplyr ggplot2 ggthemes magrittr petrinetR processmapR purrr Rcpp rlang scales tidyr]; }; hexSticker = derive2 { name="hexSticker"; version="0.4.6"; sha256="02zdnxnhci0d9dclb6z3zc8sm1c4bj8zzbapwy34h8bs3sz1c8xn"; depends=[ggimage ggplot2 hexbin showtext sysfonts]; }; hexView = derive2 { name="hexView"; version="0.3-4"; sha256="01hiqyibsd4as7jcklzg09pl12la341mg561vn16z4jzdarfvkfc"; depends=[]; }; - hexbin = derive2 { name="hexbin"; version="1.28.0"; sha256="0b58jb1kz39wzrnkv077cfzns889xly7psvhxnm3xmnx6yvd986d"; depends=[lattice]; }; + hexbin = derive2 { name="hexbin"; version="1.28.1"; sha256="1ry6jm3lqz3mj0s5rzbs6mpkz2hxpnvbw8c1vwc4pj7b173r5l22"; depends=[lattice]; }; hextri = derive2 { name="hextri"; version="0.6"; sha256="05rvigi225npncbr1brc6apc7gsg9a5jzcbmhvflwp3hbcg3hn02"; depends=[FNN hexbin]; }; hflights = derive2 { name="hflights"; version="0.1"; sha256="1rb6finck13i6949i6hsgfk90q4ybxh1m3is2mlw2m6087bpzfbd"; depends=[]; }; hglasso = derive2 { name="hglasso"; version="1.2"; sha256="1qq41ma33wz7qjs5zx72yvngpsiq62z9sd6d5hvvl83brq0fcr4b"; depends=[fields glasso igraph mvtnorm]; }; hglm = derive2 { name="hglm"; version="2.2-1"; sha256="1lyxkvqzfll1qrz5c2km9ikhq0dm63x39by4vc1nmkd24yza93nc"; depends=[hglm_data MASS Matrix]; }; hglm_data = derive2 { name="hglm.data"; version="1.0-1"; sha256="0mw1s0kahsh9jmwkxysfy5f7vbld7mpzmdnnww6im5h21jhnczx2"; depends=[MASS Matrix sp]; }; - hgm = derive2 { name="hgm"; version="1.17"; sha256="11hv4pfv3gqiargvwvrxqzfji75j291w1nilawf8yjc3isnc4wjp"; depends=[deSolve]; }; + hgm = derive2 { name="hgm"; version="1.18"; sha256="0d0s4hkn46cg85wl7nmjn707iw38kjs69p6xz33pzc1yf51l8z7w"; depends=[deSolve]; }; hgutils = derive2 { name="hgutils"; version="0.2.7"; sha256="1svxhz80h84wn1fj58p8g3rp553ima1wfdbbkm2cqnihwjxhha62"; depends=[crayon dplyr limSolve magrittr stringr]; }; hhh4contacts = derive2 { name="hhh4contacts"; version="0.13.0"; sha256="17f31xhh6kk7sx5d5dvpwpvl72wd45zgb4fcpdayx3yrm719csz9"; depends=[surveillance]; }; hhi = derive2 { name="hhi"; version="1.2.0"; sha256="1yl52c3nqdi8v60sr01l0vv8359803dm2i4c9ifazgj3h3a4h0yp"; depends=[ggplot2]; }; hht = derive2 { name="hht"; version="2.1.3"; sha256="022a8zz2m34q89h29jglfj21knlqd8dwi85qmsi78ly1vacnzap8"; depends=[EMD fields spatstat]; }; hiPOD = derive2 { name="hiPOD"; version="1.0"; sha256="1i15ickz2s0kffh99qq30pl5hsl0lbj0kp55jnbv4x72hndzhmla"; depends=[rgl]; }; hiddenf = derive2 { name="hiddenf"; version="2.0"; sha256="0shc1kfiq527mkc5i97zcm51hsvknnhjg7dyfvbfqyk145v6sz00"; depends=[]; }; - hier_part = derive2 { name="hier.part"; version="1.0-4"; sha256="03acdgzkhbk4p0wxw2g1hzklmq9hzmdkkvfj742vzfswdd803yg9"; depends=[gtools]; }; + hier_part = derive2 { name="hier.part"; version="1.0-6"; sha256="15wlpb2rsn6am8galsbjiy4psp78nlv1x2hz3cnqbwj508w6gsj0"; depends=[betareg gtools MASS]; }; hierDiversity = derive2 { name="hierDiversity"; version="0.1"; sha256="1n4jg003h9hvr2n43jwxgfpazvc5ij5lqvspxi49w8fpzpcrqrjj"; depends=[]; }; - hierNet = derive2 { name="hierNet"; version="1.8"; sha256="06ag2vnpdjpmw9q0gzghkxsqx6mh743j8wpsbah4ff742h23hy0w"; depends=[]; }; + hierNet = derive2 { name="hierNet"; version="1.9"; sha256="0fdnj50s985w06wrjc67hcy6fc4lj8jbxlskgrli9m0181vbdj69"; depends=[]; }; hierarchicalDS = derive2 { name="hierarchicalDS"; version="3.0"; sha256="16d6l3y21nhynfjk4swp3pnjr6vhcxq369djgxz907zsjby35gkz"; depends=[coda ggplot2 Matrix mc2d MCMCpack mvtnorm rgeos truncnorm xtable]; }; hierarchicalSets = derive2 { name="hierarchicalSets"; version="1.0.2"; sha256="0m5mnx1zmiscj0k1gnljr7fla4y1qhysi32a8q9jlah2q7grk7x9"; depends=[ggdendro ggplot2 gtable MASS Matrix RColorBrewer Rcpp scales]; }; hierband = derive2 { name="hierband"; version="1.0"; sha256="0d95hrgkd8b5sww3wsgs6v9zg9pm71ick8x8kj8d6vyib350h6yn"; depends=[]; }; @@ -8753,7 +8769,7 @@ in with self; { highSCREEN = derive2 { name="highSCREEN"; version="0.3"; sha256="179l82n7l7dfn40k6zgigw56ggwqyi34gllc2wvcw3yvfnd3l7s4"; depends=[gplots]; }; highTtest = derive2 { name="highTtest"; version="1.1"; sha256="18hgxlr0y8y1d4ldqmfcg4536lhyn5p6w88sq1vj74qr5wzydga1"; depends=[]; }; highcharter = derive2 { name="highcharter"; version="0.7.0"; sha256="0qfv25dqr7l54jq3vrnwphsj7wzk0an3vfx1zik36wi05yf2w8br"; depends=[assertthat broom crosstalk dplyr htmltools htmlwidgets igraph jsonlite lubridate magrittr purrr quantmod rlang rlist stringr tibble tidyr whisker xts yaml zoo]; }; - highfrequency = derive2 { name="highfrequency"; version="0.6.3"; sha256="0fhkarhqgrigbfakf5lmandc5wmdb4q9dq974wygifa3j6khqxz4"; depends=[cubature data_table lubridate mvtnorm Rcpp RcppArmadillo RcppRoll readr robustbase xts zoo]; }; + highfrequency = derive2 { name="highfrequency"; version="0.6.4"; sha256="0ikxrjzssqcv6r96d86apiwsizcycj49jlzv4i0kxwfyxvvchkvq"; depends=[cubature data_table lubridate mvtnorm Rcpp RcppArmadillo RcppRoll readr robustbase xts zoo]; }; highlight = derive2 { name="highlight"; version="0.5.0"; sha256="1shar4y07wyixg0ichdrn2xhgwkl3mv2pxkalqzisc69w605b3hf"; depends=[]; }; highlightHTML = derive2 { name="highlightHTML"; version="0.2.1"; sha256="06k2idx9aadjd6xp6kadm9jh7ap1hwg7vh0bc8vw9ll82wcp1nv1"; depends=[]; }; highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; }; @@ -8765,7 +8781,7 @@ in with self; { hillR = derive2 { name="hillR"; version="0.4.0"; sha256="0wivagbn4clfm3vbxbl3p93d9yxms94gkvi7p15lh0jfdppzm4c9"; depends=[ade4 ape FD plyr tibble]; }; hilldiv = derive2 { name="hilldiv"; version="1.5.1"; sha256="1jp4xvrpqd575y2x0i73s0bq708bzi6gdhqgz85bia6d5kf05lq9"; depends=[ape data_table FSA geiger ggplot2 ggpubr qgraph RColorBrewer scales vegan]; }; hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; }; - hindex = derive2 { name="hindex"; version="0.1.0"; sha256="12w1zz467grihjvan1db7c30psm0j85k82p01fzqgwdam3cd8as3"; depends=[foreach ggplot2]; }; + hindex = derive2 { name="hindex"; version="0.2.0"; sha256="01mcd2br33qqkfcyxl584f3l6kyb2cgzpd207p0mynzdaallgxgc"; depends=[foreach ggplot2 purrr]; }; hindexcalculator = derive2 { name="hindexcalculator"; version="1.0.0"; sha256="06b4dn629avmnyqxb0l39m00wz9cg9dddmm6qhgwgnzlxh14ifgk"; depends=[]; }; hint = derive2 { name="hint"; version="0.1-1"; sha256="1n18j2hcb1qynhsln10nzryi20l5aqhr7i1aanww10y5dz573zi3"; depends=[]; }; hipread = derive2 { name="hipread"; version="0.2.1"; sha256="0zll3w0arwjaz16dr9dxns3s25p3fiq4ccnziq4nw7i552zaixd7"; depends=[BH R6 Rcpp rlang tibble]; }; @@ -8785,7 +8801,6 @@ in with self; { hmi = derive2 { name="hmi"; version="0.9.17"; sha256="08cppa061xn13lyp7d9jsybn0cc6k2ffml79m5bp7fk11gzq18mb"; depends=[boot coda linLIR lme4 MASS Matrix MCMCglmm mice msm mvtnorm nlme nnet ordinal pbivnorm rlang tmvtnorm VGAM]; }; hmlasso = derive2 { name="hmlasso"; version="0.0.1"; sha256="0ydcyz9pw30ji8ghrvkgcbmp27d661vajl97b8cwis52605a3gfx"; depends=[BH MASS Matrix Rcpp RSpectra]; }; hmm_discnp = derive2 { name="hmm.discnp"; version="2.1-12"; sha256="1jxbwqh0cc0f07qza0kjbhh3zy7xlk5q7gb8078kprg37if1qd2p"; depends=[nnet]; }; - hmmhdd = derive2 { name="hmmhdd"; version="1.0"; sha256="16jz951d1ssai0gmfnnfikkkvc8yca29a82dq7092kbzwc4i90sk"; depends=[gmfd mvtnorm roahd]; }; hmmm = derive2 { name="hmmm"; version="1.0-4"; sha256="1sbr85lcmcw3lv0ygqwfbarr91dp3br1xnlygy49145cvl93nfci"; depends=[MASS mvtnorm nleqslv quadprog]; }; hms = derive2 { name="hms"; version="0.5.3"; sha256="1baki0qw5ijgiflvsdvqj3apg4yanf12vx14kwbqdzk5rz46fasf"; depends=[pkgconfig rlang vctrs]; }; hmstimer = derive2 { name="hmstimer"; version="0.0.2"; sha256="0qv2pls6mplnv3mylbiwh83gnvq2qkdpnnjnxnhrgmwia9fapixs"; depends=[]; }; @@ -8807,7 +8822,7 @@ in with self; { hornpa = derive2 { name="hornpa"; version="1.0"; sha256="0pfvk2jkrwgvshgq9g55qijgpjh0677rpbya0r8759n92v3axbp4"; depends=[]; }; horserule = derive2 { name="horserule"; version="1.0.0"; sha256="0d348pn0ld7lr9lfl1z05905l9kl296j0xic1pib6r5l1c5600r9"; depends=[gbm ggplot2 inTrees MASS mvnfast randomForest RColorBrewer Rdpack]; }; horseshoe = derive2 { name="horseshoe"; version="0.2.0"; sha256="1qhkw6agkhpmgf27429c3kqqhbvpg61l0dvfxg7n564y2ha76r3c"; depends=[]; }; - hot_deck = derive2 { name="hot.deck"; version="1.1"; sha256="13pfgcyqaf5ik3pi8vgm06xmqli4hgslzlmhy1zi951anzdr49bd"; depends=[mice]; }; + hot_deck = derive2 { name="hot.deck"; version="1.1-1"; sha256="0gq59c534gwxilq8jgfmrvy6xzxva2d38zmv8sxvlap5kzbj12vc"; depends=[mice]; }; hotspot = derive2 { name="hotspot"; version="1.0"; sha256="0a4w5d6rg324hd06lfwr1hxf6bwr10n55s3ynz5bpkh9c61yik3n"; depends=[]; }; hotspots = derive2 { name="hotspots"; version="1.0.3"; sha256="12v88k3yz1bsxx9p5dx8y54ccqcglwknm2jr7ybygdj2yasjr5l0"; depends=[ineq lattice]; }; housingData = derive2 { name="housingData"; version="0.3.0"; sha256="0ngfx2vjx705xixzpz0rgx1481cr2szj4yfi5g7ma1hhivddl7d1"; depends=[]; }; @@ -8815,18 +8830,20 @@ in with self; { hpa = derive2 { name="hpa"; version="1.0.1"; sha256="18055gh3nasdh6fh1xw95zl2vidqkw5b99b1zhh78j84lzs6r3gm"; depends=[Rcpp RcppArmadillo]; }; hpackedbubble = derive2 { name="hpackedbubble"; version="0.1.0"; sha256="1br7q4958f1zgvisglsaf41nz2ahnqi3bzazvlfnmk3nq03cb1ri"; depends=[htmlwidgets]; }; hpcwld = derive2 { name="hpcwld"; version="0.5"; sha256="17k4mw41gygwgvh7h78m0jgzh1bivrvrsr8lgxxw3sbkw88lwb40"; depends=[multicool partitions]; }; - hpiR = derive2 { name="hpiR"; version="0.3.0"; sha256="0i15hmcf35kh16nrlc03y5jmrssr3k734s7vym7wbiwfy4x8d37b"; depends=[caret dplyr forecast ggplot2 gridExtra imputeTS lubridate magrittr MASS pdp plyr purrr ranger rlang robustbase zoo]; }; + hpiR = derive2 { name="hpiR"; version="0.3.1"; sha256="18jkgxbbd8wdqdgi5y0n4ch8w5br3hrjw024iv7rkbgwg7rcpkim"; depends=[dplyr forecast ggplot2 gridExtra imputeTS lubridate magrittr MASS pdp plyr purrr ranger rlang robustbase zoo]; }; hpoPlot = derive2 { name="hpoPlot"; version="2.4"; sha256="176bf93gjwbi2z7nz81w4aycwax6f7jxvs3236zrmf0f0f4m7bkc"; depends=[functional magrittr Rgraphviz]; }; hqmisc = derive2 { name="hqmisc"; version="0.1-1"; sha256="0jcy2hb3dmzf9j4n92aq7247mx9w7n30wpsx0dkchqnjwlqwwncw"; depends=[]; }; hqreg = derive2 { name="hqreg"; version="1.4"; sha256="1j6zp3rmpjx409vm7kq159mlawg87wsq0ypdkan34yxxv9py2jmi"; depends=[]; }; hrIPW = derive2 { name="hrIPW"; version="0.1.2"; sha256="0bgcz4v9cj3aajcp25bv4g7magj54n86qy5nmgr6kqm8sspy260x"; depends=[survival]; }; - hrbrthemes = derive2 { name="hrbrthemes"; version="0.6.0"; sha256="0k6agxva3zqq3z9j8g7ismabvyr7j96qqidck23dgbgwgivjfkkq"; depends=[extrafont gdtools ggplot2 htmltools knitr magrittr rmarkdown scales]; }; + hrbrthemes = derive2 { name="hrbrthemes"; version="0.8.0"; sha256="057h60b5p53dcyjyfwlgjc1ry968s9s64dw78p443w8717zk7zpc"; depends=[extrafont gdtools ggplot2 htmltools knitr magrittr rmarkdown scales]; }; hrcomprisk = derive2 { name="hrcomprisk"; version="0.1.1"; sha256="0w0ij2yqgg6gkn3pdaism1xqw3dfnm670j2pmsd85qk1ybxzq9l5"; depends=[survival]; }; - hsdar = derive2 { name="hsdar"; version="1.0.0"; sha256="0lm92bznyhyfzjfd2j6bfqh78pa8qbwf1q7hai9880ghf99fz81m"; depends=[caret raster rgdal signal]; }; + hscovar = derive2 { name="hscovar"; version="0.1.2"; sha256="1w6iz6z7zbk4wh5bjf6qhalngm30c7kdc1qkyjmnc1ajvzk1r992"; depends=[foreach Matrix rlist]; }; + hsdar = derive2 { name="hsdar"; version="1.0.1"; sha256="1apcch51hagrbm7x3s7wl78bm2mpyxg4py7syz37b58r9dph1905"; depends=[caret raster rgdal signal]; }; hsicCCA = derive2 { name="hsicCCA"; version="1.0"; sha256="1d4lkjrihwhl3jrsj7250ccd90nfwpllyavc3mp15fhcy2jnjci8"; depends=[]; }; hsm = derive2 { name="hsm"; version="0.2.0"; sha256="066shjikqrrkxpnra4zknax1a0sk5nx9ms1br58vwqqvqq479rym"; depends=[]; }; hsmm = derive2 { name="hsmm"; version="0.4"; sha256="1fh8c5kfv4brygdq6bfkrhrhkm99mxl4ljb1mhp9nf2bjlla11mc"; depends=[mvtnorm]; }; hsphase = derive2 { name="hsphase"; version="2.0.2"; sha256="1b62k9sc6604djy37anslvqjpbrj9wsc9mvnfbrnmhqf4g0nnpdq"; depends=[Rcpp RcppArmadillo snowfall]; }; + hsrecombi = derive2 { name="hsrecombi"; version="0.1.3"; sha256="1b74dq0hry1867zsv52fpxspq1hzzrdvplkfr6n4zg3p9wf2kkxd"; depends=[data_table dplyr hsphase Rcpp rlist]; }; hsstan = derive2 { name="hsstan"; version="0.6"; sha256="14k63agcq8m2lg5pw2309pi78950254v3z2m92pl4wjsikmsqrc1"; depends=[BH ggplot2 loo pROC Rcpp RcppEigen rstan rstantools StanHeaders]; }; htdp = derive2 { name="htdp"; version="0.1.4"; sha256="0w579qp0p544xryb5r08m1nhqf7rmgv9q0lyx6my4av62l70ka5w"; depends=[Rcpp]; }; htm2txt = derive2 { name="htm2txt"; version="2.1.1"; sha256="09q026yy8qm1fb3a4bf9vsp4j09kayl7xmk0p58ikar5l3bmfdjv"; depends=[]; }; @@ -8837,12 +8854,12 @@ in with self; { htmlwidgets = derive2 { name="htmlwidgets"; version="1.5.1"; sha256="10fp306l1nybkah6jrlrqwwdb6zvklbddp8i3w9v9naj8la5jbnl"; depends=[htmltools jsonlite yaml]; }; htree = derive2 { name="htree"; version="2.0.0"; sha256="15bi5c2p4aghihp3k12s78447j2x9hbsaq56b5lc8jmd1vf0jdwb"; depends=[]; }; hts = derive2 { name="hts"; version="5.1.5"; sha256="0mvsxrk7wkfn81hbk8a80fckiqiwdbvhq42k7c6lm69gamnbak2f"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; - httk = derive2 { name="httk"; version="1.10.1"; sha256="05zbxyxlq94i6v4wwx7znr9p4k5gn9z7yi818v9f76bv8xi7mxv2"; depends=[data_table deSolve magrittr msm mvtnorm survey truncnorm]; }; + httk = derive2 { name="httk"; version="2.0.1"; sha256="02msk6nb3sscww7pa68finfvpmrf8z4jsw08672q4qz50sjccjlp"; depends=[data_table deSolve magrittr msm mvtnorm purrr survey truncnorm]; }; httpRequest = derive2 { name="httpRequest"; version="0.0.10"; sha256="0f6mksy38p9nklsr44ki7a79df1f28jwn2jfyb6f9kbjzh98746j"; depends=[]; }; httpcache = derive2 { name="httpcache"; version="1.1.0"; sha256="11hdc1jj2jbgvsps1h55azq0cr2fl556k631ns9k0747sjfmy2k9"; depends=[digest httr]; }; httpcode = derive2 { name="httpcode"; version="0.2.0"; sha256="06k853ihwzkcx4z3jzazpb03p91frqkwz18jy4fwr8j2nwyqbhgv"; depends=[]; }; httping = derive2 { name="httping"; version="0.2.0"; sha256="0hdcf51yak8yagy4xj9cyck934lgmvpkd08jvlql33ir5mqvvv3i"; depends=[httpcode httr jsonlite magrittr pryr]; }; - httptest = derive2 { name="httptest"; version="3.2.2"; sha256="1q2lhqi5lhdc15wjrcr4z2yxjrfhjkgn0wwxr0mawsfz8cy3703q"; depends=[digest httr jsonlite testthat]; }; + httptest = derive2 { name="httptest"; version="3.3.0"; sha256="1xcq0siyjb17yggaycxgp3byi276vwfa71450zbbzcb8617wsapd"; depends=[curl digest httr jsonlite testthat]; }; httpuv = derive2 { name="httpuv"; version="1.5.2"; sha256="13ax0hs2lc39ilznh1zarwqdzahcbhb8adilrfik3xg0fkljpcwk"; depends=[BH later promises R6 Rcpp]; }; httr = derive2 { name="httr"; version="1.4.1"; sha256="0mp1il13q6n49n2hv1p2p8x6avjan6dr5az19ql4hb78pc3pwp37"; depends=[curl jsonlite mime openssl R6]; }; hues = derive2 { name="hues"; version="0.2.0"; sha256="062i7yc16nmnp15c1jh4xffw2lpklp36wkn1yvagh186ahnlgffx"; depends=[colorspace]; }; @@ -8850,11 +8867,11 @@ in with self; { humanFormat = derive2 { name="humanFormat"; version="1.0"; sha256="0zwjbl8s5dx5d57sfmq6myc6snximc56zl88h8y1s1jqphyn9sir"; depends=[testthat]; }; humaniformat = derive2 { name="humaniformat"; version="0.6.0"; sha256="0vaynjzz57pk4y1liag9lpn9jkag2033a6bkn28zzm7ndg3344l6"; depends=[Rcpp]; }; humanize = derive2 { name="humanize"; version="0.2.0"; sha256="0hhhd640n77s8xaa2gbd9fckdk2yjg68gdb7wjy56a2khzqfssxr"; depends=[assertthat glue lubridate]; }; - humanleague = derive2 { name="humanleague"; version="2.1.0"; sha256="1mp7lqwx97r60amllz9cjsixw21zspgs4zkp0nc63z315vgfzwrx"; depends=[Rcpp]; }; + humanleague = derive2 { name="humanleague"; version="2.1.2"; sha256="181gz1plz9g8bbjaf67ndhfd2qz5ksnd2l212wm1a383ddc58pmr"; depends=[Rcpp]; }; humidity = derive2 { name="humidity"; version="0.1.5"; sha256="143pn8jjinlda76b94qh5zw2sfajw0ifcx774x6adr2il5a5wm99"; depends=[]; }; hunspell = derive2 { name="hunspell"; version="3.0"; sha256="0mwqw5p0ph083plm2hr2hqr50bjg2dw862dpsfm4l2fgyy3rryq1"; depends=[digest Rcpp]; }; hurdlr = derive2 { name="hurdlr"; version="0.1"; sha256="1ryrqsxa07isxv2zx156bcn36d4yjvwpirb8jqcmqm97q7rmihmq"; depends=[]; }; - hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.1.0"; sha256="1wwa1b96yglmnkvn209v8g0cvx567i2mxd7y6vjzzy5l428cf9f0"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate mapproj maps purrr RColorBrewer rlang stringr tidyr]; }; + hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.1.1"; sha256="0a8xy71dkq2bzdnc90irxmbcxhi0anh87ic22x7b22c3m5605w6s"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate mapproj maps purrr RColorBrewer rlang stringr tidyr]; }; hutils = derive2 { name="hutils"; version="1.5.1"; sha256="1x2x8gg2hdwxj1gz81pjls4y3yilssksirsbjnjd665rjs3jx7fj"; depends=[data_table fastmatch magrittr]; }; hutilscpp = derive2 { name="hutilscpp"; version="0.3.0"; sha256="1x7h1fq6qyylda8k3a1v6s0cx7pf169k86akb6ccwgiikqqsp51h"; depends=[data_table hutils Rcpp]; }; huxtable = derive2 { name="huxtable"; version="4.7.1"; sha256="0nkx6kpvh4z0fby7cv9bvripkqdha4f4c893h53a543q0ap06pjh"; depends=[assertthat generics glue memoise rlang stringr tibble tidyselect]; }; @@ -8863,67 +8880,65 @@ in with self; { hwriter = derive2 { name="hwriter"; version="1.3.2"; sha256="0arjsz854rfkfqhgvpqbm9lfni97dcjs66isdsfvwfd2wz932dbb"; depends=[]; }; hwwntest = derive2 { name="hwwntest"; version="1.3.1"; sha256="1mz5svx5vbisdl5wxdnwip13pq4slyigc7j52l526rr9n0l0pr5v"; depends=[polynom wavethresh]; }; hybridEnsemble = derive2 { name="hybridEnsemble"; version="1.0.0"; sha256="08y11cmlhnl456wxsvh3ll1f9ywkmgqjwlwr3v3qhm54nlanwvkr"; depends=[ada AUC e1071 FNN genalg GenSA glmnet kernelFactory NMOF nnet nnls pso quadprog randomForest reportr Rmalschains ROCR rotationForest rpart soma tabuSearch]; }; - hybridHclust = derive2 { name="hybridHclust"; version="1.0-5"; sha256="0w06vna66hlmvx10dl1l0nzbnxkd634gxjz26w015f83vpmfc5vz"; depends=[cluster]; }; hybridModels = derive2 { name="hybridModels"; version="0.3.5"; sha256="0bg065j3y3xwxlib9i78pa0ghlblyp4qq1kmh3j02w8xi00rnrs6"; depends=[doParallel foreach ggplot2 GillespieSSA reshape2 stringr]; }; hydra = derive2 { name="hydra"; version="0.1.0"; sha256="0r3r8cds4h15narawxhzkrvgnf00vlgrgqdgnmbzjyyb1dmry8wn"; depends=[]; }; hydroApps = derive2 { name="hydroApps"; version="0.1-1"; sha256="1ycv7l2ywwnx2mgklg6rry7n24jyhi4spvp1xl345yvyn9kf15dz"; depends=[nsRFA]; }; - hydroGOF = derive2 { name="hydroGOF"; version="0.3-10"; sha256="010f2i53rl4fjl65fg5wzaci0kc5khpak5v1zz9yxsj77fmrmvfy"; depends=[hydroTSM xts zoo]; }; - hydroPSO = derive2 { name="hydroPSO"; version="0.4-1"; sha256="0ic43rpcr9n7fjyvw7n57pm9lhqk09pi7lg2nvngj2fg4y8288jb"; depends=[Hmisc hydroGOF hydroTSM lattice lhs scatterplot3d sp vioplot zoo]; }; - hydroTSM = derive2 { name="hydroTSM"; version="0.5-1"; sha256="053id9ldr10mafww3vas9fiy16lz0n1mqqfg6wjsbm5r15jkz3ha"; depends=[automap e1071 gstat lattice maptools sp xts zoo]; }; + hydroGOF = derive2 { name="hydroGOF"; version="0.4-0"; sha256="0fw8b66k7gdkdjxgmdpp3lk9d8p0wmlvhq2rkcvajjb5wd09f43a"; depends=[hydroTSM xts zoo]; }; + hydroPSO = derive2 { name="hydroPSO"; version="0.5-0"; sha256="1g7h4x9d0kadpvcpw6km8mp6d913ff0wjavxz1dcxrz3ix7z7bza"; depends=[data_table Hmisc hydroGOF hydroTSM lattice lhs scatterplot3d sp vioplot zoo]; }; + hydroTSM = derive2 { name="hydroTSM"; version="0.6-0"; sha256="1msavd2k05apsky88zkk1l3c6y3v95fwhmr6xmwsap70bj25krsv"; depends=[automap e1071 gstat lattice maptools sp xts zoo]; }; hydrogeo = derive2 { name="hydrogeo"; version="0.6-1"; sha256="16m6yvr9yhvb0vdh9pqd6gzf3h9km7gd89y6risjddv6g83469k8"; depends=[]; }; hydrolinks = derive2 { name="hydrolinks"; version="0.10.0"; sha256="0004a03bx9l9wq6zdz5az41rjxv1ka4qmnxk6ksy8i7365wsay88"; depends=[dbplyr dplyr httr rappdirs RSQLite sf units]; }; - hydroscoper = derive2 { name="hydroscoper"; version="1.2"; sha256="1aq35rz46ylkwlc6m55c73xyyrcx7p6mmvqj6sac9jdjwn74jvaj"; depends=[jsonlite pingr readr stringi stringr tibble]; }; + hydroscoper = derive2 { name="hydroscoper"; version="1.3"; sha256="03g841a1sbhp2kcdl39b9577lyd9i1241smn41578dcyrxshc2in"; depends=[jsonlite pingr readr stringi stringr tibble]; }; hydrostats = derive2 { name="hydrostats"; version="0.2.7"; sha256="16xrl94289kk1fb6pj0j8q8b40rmsm86fz2msmrmxh7mdp6hmxx9"; depends=[]; }; hyfo = derive2 { name="hyfo"; version="1.4.0"; sha256="03xd4nm8zmc8gw8rml8svfim64xcslvpmdcldlri9cf89s8v35br"; depends=[data_table ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; }; hyper_fit = derive2 { name="hyper.fit"; version="1.1.1"; sha256="1xibiydfkhzsw0yqfc0xfzj4yz8xyxqlvnfpyxg33v5fwp9wap3v"; depends=[LaplacesDemon magicaxis MASS rgl]; }; hyper2 = derive2 { name="hyper2"; version="1.0-7"; sha256="155ycb26mgk0ic899ji1pv1k2mmwfzwaa0zj38a9v6fwdgw87rpl"; depends=[cubature magrittr partitions Rcpp]; }; hyperSMURF = derive2 { name="hyperSMURF"; version="2.0"; sha256="1aczsph6ax5xfd5rfvsd9bmgaq3j2f5f82fx8whrgbin0hxz19d8"; depends=[randomForest unbalanced]; }; - hyperSpec = derive2 { name="hyperSpec"; version="0.99-20200115"; sha256="19z65pc6fvgs7dl050fhvljs8ylwag2gdnsvdlniy7q3qr5mv16i"; depends=[dplyr ggplot2 lattice latticeExtra lazyeval testthat XML]; }; - hypercube = derive2 { name="hypercube"; version="0.2.0"; sha256="13b521vpxzk80ldr0v4bayxm4kwssqzpmzlykv5xhghvfdsqxqri"; depends=[dplyr plotly stringr]; }; - hypergate = derive2 { name="hypergate"; version="0.8.1"; sha256="17n8bs869c56jm76nq82alkajbyhbgn6nydzb1zh82i0ns269rlz"; depends=[]; }; + hyperSpec = derive2 { name="hyperSpec"; version="0.99-20200213"; sha256="19l1g764rrklbb9hhqj65ky9w19lqyw2g1fqin7r5bpyi6d9r2pm"; depends=[dplyr ggplot2 lattice latticeExtra lazyeval testthat xml2]; }; + hypercube = derive2 { name="hypercube"; version="0.2.1"; sha256="0m0n64rl5fnhvhfdknrza8a0h5lw8vbgakaqbyfx77ixhwqhjn1l"; depends=[dplyr plotly stringr]; }; + hypergate = derive2 { name="hypergate"; version="0.8.3"; sha256="0h36wi4bdxinv7p9alyb7jv1902vdanxx7yvyaw2dcqkdjlzzj49"; depends=[]; }; hypergea = derive2 { name="hypergea"; version="1.3.6"; sha256="1k1525bkkj83j2nn9ixidb8vjvdmc4l9jvfarzgg532gg7wn3841"; depends=[]; }; hypergeo = derive2 { name="hypergeo"; version="1.2-13"; sha256="13jdiy216znwhr91iqnh03mvkmyscw439syb3h4i67dd78sphnvd"; depends=[contfrac deSolve elliptic]; }; hypersampleplan = derive2 { name="hypersampleplan"; version="0.1.1"; sha256="1sk3s1jm46ac4i7p433s3kyngj86kq2821zzhp30a3y8vi1j2psq"; depends=[]; }; hypervolume = derive2 { name="hypervolume"; version="2.0.12"; sha256="0jd49jncmg23vm9rkcy6sd4zjwlw75hwps7wahpb36zs9kb63ssq"; depends=[data_table e1071 fastcluster geometry hitandrun ks maps MASS mvtnorm pdist progress raster Rcpp RcppArmadillo rgeos rgl sp]; }; hypothesestest = derive2 { name="hypothesestest"; version="1.0"; sha256="0g8sm386m1zm9i3900r62x83wb600cy8hqk7dlvbx6wcgrxg82sm"; depends=[]; }; hypothesisr = derive2 { name="hypothesisr"; version="0.1.1"; sha256="0z06risagphhvqiw4lrxy52q6q2yr10w2yxsm8iz1wh9ik097pcv"; depends=[dplyr httr jsonlite]; }; - hypr = derive2 { name="hypr"; version="0.1.5"; sha256="0xd4vy4zl0anxgisldxag5qciawcii4v41ix846gn16vd46npfrk"; depends=[MASS pracma]; }; + hypr = derive2 { name="hypr"; version="0.1.6"; sha256="01zn533q43221542m24ybnyx5lhb6sz76qqzfglsaq794l8sr0my"; depends=[MASS pracma]; }; hysteresis = derive2 { name="hysteresis"; version="2.6"; sha256="00v19m52bg2i3zg8p7yj56axzj9sm64qr61226p5h7sn0zrpws3b"; depends=[car MASS msm]; }; hzar = derive2 { name="hzar"; version="0.2-5"; sha256="000l4ki3hvznnhkxc5j422h5ifnsfqalv666j48yby1hsf1lc3kg"; depends=[coda foreach MCMCpack]; }; iAdapt = derive2 { name="iAdapt"; version="0.1.0"; sha256="0ykcvqm1aswc4iypapml22194nxi6mxvxipy6wj7l9g4cazfa8j8"; depends=[shiny shinydashboard]; }; iBATCGH = derive2 { name="iBATCGH"; version="1.3"; sha256="0pnkkabzi57czcwd9i15nwv8ggwvyxmvn1wam7yrrrbvmi17lmrm"; depends=[msm Rcpp RcppArmadillo]; }; iBST = derive2 { name="iBST"; version="1.0"; sha256="02p7lcr1wrf21v4568jc8hmjcijy3fnbv77s8nlhv2s4p0pgzh5x"; depends=[Rcpp rpart survival]; }; - iBreakDown = derive2 { name="iBreakDown"; version="0.9.9"; sha256="1sxd2x837qmi47p0c9bmy1lqldv2l214qw5n28w3bkwalbdaizyk"; depends=[DALEX ggplot2]; }; + iBreakDown = derive2 { name="iBreakDown"; version="1.0"; sha256="1pqw2hgxg96x3v9y7wf8m8n1czhlhyxcwpavj4vl0s95d1dzzpcj"; depends=[DALEX ggplot2]; }; iC10 = derive2 { name="iC10"; version="1.5"; sha256="1xq6xv582wxdb0nc2nia3q38155gx8z26idiqyx7h1rjb20hhwdl"; depends=[iC10TrainingData impute pamr]; }; iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.3.1"; sha256="175ymib3h359296hk36psryksisipx63ybvacz8hys21irzx58j1"; depends=[]; }; iCARH = derive2 { name="iCARH"; version="2.0.1.1"; sha256="0722dfydq16vhdk7hrdwngkppq0g20ghak614jfnrfr6rnrn630s"; depends=[abind ggplot2 igraph KEGGgraph MASS Matrix mc2d RCurl reshape2 rstan]; }; - iCellR = derive2 { name="iCellR"; version="1.3.0"; sha256="060kyq67aql7ykhr888qd3w8qm65sgix5nhiaxvwsz6jgq7lrrl2"; depends=[ape ggdendro ggplot2 ggpubr ggrepel gridExtra hdf5r Hmisc htmlwidgets knitr Matrix NbClust pheatmap plotly plyr RColorBrewer reshape Rtsne scatterplot3d shiny uwot]; }; + iCellR = derive2 { name="iCellR"; version="1.3.3"; sha256="0r4s8jrk8ymklnw9i194kiqarggyny0cq1msqfvx5cyjprym7bp3"; depends=[ape ggdendro ggplot2 ggpubr ggrepel gridExtra hdf5r Hmisc htmlwidgets knitr Matrix NbClust pheatmap plotly plyr progress RColorBrewer reshape Rtsne scatterplot3d shiny uwot]; }; iCiteR = derive2 { name="iCiteR"; version="0.2.1"; sha256="0hbps2q5i7yj6zvqawlayhqqr5iv39yqc0xnk7fvra7rimzc1qid"; depends=[httr]; }; iClick = derive2 { name="iClick"; version="1.5"; sha256="0yq0r9nz1mf9ci6l30ylqxbgl8mf1ahyqzr7m6nks0ygxabipdnd"; depends=[boot car coefplot fBasics forecast lattice lmtest lubridate openair papeR rugarch sandwich timeDate timeSeries xts zoo]; }; iCluster = derive2 { name="iCluster"; version="2.1.0"; sha256="09j36xv87d382m5ijkhmp2mxaajc4k97cf9k1hb11ksk7fxdqz6r"; depends=[caTools gdata gplots gtools lattice]; }; iDINGO = derive2 { name="iDINGO"; version="1.0.3"; sha256="0aa7g7shcbjzjwhnrh6hd4idjdka9rd7jawkvqvyjnwcql2qlapv"; depends=[GGMridge glasso igraph mvtnorm scales visNetwork]; }; iDOS = derive2 { name="iDOS"; version="1.0.0"; sha256="1jj98ikzvfp6qbnh2j6msi0m89sbmjjafgry43rq7qmczzs81hl8"; depends=[VennDiagram]; }; iDynoR = derive2 { name="iDynoR"; version="1.0"; sha256="01702vl10191mbq2wby1m0y6h8i6y6ic4pa83d27cg3yccsrhziz"; depends=[vegan XML]; }; - iECAT = derive2 { name="iECAT"; version="0.8"; sha256="0kv8db7ss3vk21ccl8qfj4x69npfzwmm3piddj9l0vwrwd3ccl32"; depends=[MetaSKAT SKAT]; }; iFad = derive2 { name="iFad"; version="3.0"; sha256="0jrl9bayihp3wb4k5w9kc71qlsdxk7vl83ydfibx2bg79c4hf3cs"; depends=[coda MASS Rlab ROCR]; }; iGSEA = derive2 { name="iGSEA"; version="1.2"; sha256="1xlz8mbxqnrwyqj7jwma7vmvjlaccajbfxf3hi4wp5qs2pch8806"; depends=[]; }; iGasso = derive2 { name="iGasso"; version="1.4"; sha256="17xxqncl5xcphdqclghcazygcgibf8ijdf4kkl3ga11xf70sahj2"; depends=[CompQuadForm lattice]; }; iMRMC = derive2 { name="iMRMC"; version="1.2.1"; sha256="0n0i37cqj82cv5ksyva5pkwm5lasgpwljsqm692n4dkmkimc1wv9"; depends=[]; }; iMediate = derive2 { name="iMediate"; version="0.5.5"; sha256="1lwhrzm4g2fcazh782g7p11v5pyx165ig1dzgkmdmjffpwk0w8b4"; depends=[MBESS mvtnorm plotly]; }; - iNOTE = derive2 { name="iNOTE"; version="1.0"; sha256="1969xmgfv9405r09zpd2icvjd9vvzw4dx5qaqxk1a0jvbvhp3h88"; depends=[CompQuadForm mixtools plyr]; }; + iNEXT = derive2 { name="iNEXT"; version="2.0.20"; sha256="14bagsb0ja3j53i0g4a2ax2gj7lyc6sjcc7isdjx94clbnc2zcsg"; depends=[ggplot2 reshape2]; }; + iNZightTools = derive2 { name="iNZightTools"; version="1.8.3"; sha256="1sf3gsxss4xnncjrlw49ljvlzz70zckq14mm5n6kmsz9nwaay2jk"; depends=[chron dplyr forcats haven lubridate magrittr readr readxl stringr survey tibble tidyr validate zoo]; }; iRF = derive2 { name="iRF"; version="2.0.0"; sha256="1ll4lxg743p2zipxcq13yjsc7j7dk766dcyixwxilllbisg0dh8y"; depends=[AUC data_table doParallel dplyr foreach Matrix RColorBrewer Rcpp]; }; iRafNet = derive2 { name="iRafNet"; version="1.1-1"; sha256="0w9bry49apkrrrabglnv5w9l47jakmc30jh8q22a8gazwss293fb"; depends=[ROCR]; }; - iRefR = derive2 { name="iRefR"; version="1.13"; sha256="17kjfga62xc4s1kii5clxszbag2dr1dyxfm7jasr20prx28ya6pp"; depends=[graph igraph RBGL]; }; iRegression = derive2 { name="iRegression"; version="1.2.1"; sha256="1kwsrmsflmqan96aj0dczlszfww1dlg6rwycyid52f7ghg9810rn"; depends=[mgcv]; }; iRepro = derive2 { name="iRepro"; version="1.1"; sha256="1sqg1n83m1308v6bk8ilra8w01frqyd8vpvmv63rllxz38r3vyhz"; depends=[]; }; iSDM = derive2 { name="iSDM"; version="1.0"; sha256="1hzs187mwv3k2wx6dpvkizjhkcx63mznd06wiw6047lf5jrlif0a"; depends=[ade4 colorRamps geometry geosphere maptools MASS pdist raster rgdal rgl sp virtualspecies]; }; - iSTATS = derive2 { name="iSTATS"; version="1.1.0"; sha256="0hkyf3qa35hk8hs4qraz2y433ad93bjmi1mlmzfaw132x96f8zvf"; depends=[Cairo data_table ggplot2 gtools plotly rstudioapi shiny shinyBS shinyWidgets]; }; + iSTATS = derive2 { name="iSTATS"; version="1.2"; sha256="0ddkgszkihlpfi3vq3m3jyr293471vgj27c5frpap0bs404lhqh8"; depends=[Cairo data_table ggplot2 gtools plotly rstudioapi shiny shinyBS shinyWidgets]; }; iTOP = derive2 { name="iTOP"; version="1.0.2"; sha256="1n6nlmmx2h63nksycgzr7qsnd1j6bxa629av7cfd3ihriim7dj47"; depends=[corpcor Matrix]; }; iWISA = derive2 { name="iWISA"; version="1.0-2"; sha256="0jqi1kh7jlc04nb9d1w711q4i8j1vgwbxjls09z7853kv22wxfyz"; depends=[fda ggplot2 waveslim]; }; iWeigReg = derive2 { name="iWeigReg"; version="1.0"; sha256="09ajbqllr4ajmpk8qs6qw019fx8a7vsabm37867zycssn77z9nc8"; depends=[MASS trust]; }; iZID = derive2 { name="iZID"; version="0.0.1"; sha256="1jaqdh6i5xyfw4y2wd9qivzjklf4j2xxnya8ssn7rv5bz6misgcz"; depends=[doParallel extraDistr foreach rootSolve]; }; iadf = derive2 { name="iadf"; version="0.1.0"; sha256="02zx9n4ncg10bbydrr05631vzc4w2b1jg3x6xiaffg7x5rh4mnyf"; depends=[dplR dplyr manipulate rlang tibble tidyr]; }; - iai = derive2 { name="iai"; version="1.1.0"; sha256="1ck5znn3l80ahh6n6qvp8rw4307blkqyr1jmq9ksifb5hkqpxyfw"; depends=[JuliaCall rlang stringr]; }; + iai = derive2 { name="iai"; version="1.2.0"; sha256="0v1xsnhx73ldpsbnki5g0q86dih1pcgb1f10mmq7dn47s2mm6zxg"; depends=[JuliaCall rlang stringr]; }; iarm = derive2 { name="iarm"; version="0.3.0"; sha256="0v5zb2pgzqb9brmq0calmghq20i8w3wx147781v4f6ll0abkhvxx"; depends=[eRm PP psychotools vcdExtra]; }; ibd = derive2 { name="ibd"; version="1.5"; sha256="0rxvy4hn4fpbv6y214ggkmgfvzwns5mkanp4h8201rjk3v84mk2r"; depends=[car emmeans lpSolve multcomp]; }; ibdreg = derive2 { name="ibdreg"; version="0.2.5"; sha256="1kaa5q1byi30wzr0mw4w2cv1ssxprzcwf91wrpqwkgcsdy7dkh2g"; depends=[]; }; @@ -8949,15 +8964,15 @@ in with self; { icdGLM = derive2 { name="icdGLM"; version="1.0.0"; sha256="1mh9kwn21n19v4lrmj33ghpna7dl66fx19gi6lcjanmrpzrkwdnz"; depends=[Matrix]; }; icemelt = derive2 { name="icemelt"; version="1.0"; sha256="13pjbyh2ggns36m8s43m2cb0kvisjlfxq75gqscldp75zjli2wi8"; depends=[survival]; }; icenReg = derive2 { name="icenReg"; version="2.0.13"; sha256="1kyzvhcrmafprwdpc4dhjdg8dxf0zic4r22hzdnah9rfihds086l"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; - icensBKL = derive2 { name="icensBKL"; version="1.1"; sha256="12zx5x81jy48mp0l6a5ga0ikkjxvndv5cv2xf6d2lczfk7fz9lbp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; }; + icensBKL = derive2 { name="icensBKL"; version="1.2"; sha256="1zzv80jnn8ilnc1gv4nj24l2fl8805rjhqjgkb0xx4y9zhpg1jkp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; }; icensmis = derive2 { name="icensmis"; version="1.3.1"; sha256="1c0j43wffb5h99chlj8j45lpan7dpn2i0r4rr6b2kq16p1zabfjw"; depends=[Rcpp]; }; icesAdvice = derive2 { name="icesAdvice"; version="2.0-0"; sha256="0sx93fsx2srmynnvs3bjb525m9a5w70qr9lghmkqa07crd991vfr"; depends=[]; }; icesDatras = derive2 { name="icesDatras"; version="1.3-0"; sha256="0yaqlximxa3rcjxgrd0mii02mm9gpcxgw3i8pymp00bk8zixvj30"; depends=[]; }; icesSAG = derive2 { name="icesSAG"; version="1.3-6"; sha256="08nlsvs23j7ax03gwld3ycyvhfrhs70jdjif3562q1ysgvvkbf45"; depends=[httr icesVocab openssl png xml2]; }; - icesTAF = derive2 { name="icesTAF"; version="3.3-2"; sha256="113qbqpna6dvf9vrrnlapm0rix1fc1hawaa7jsa2rj7q4pbyijc7"; depends=[bibtex lattice]; }; + icesTAF = derive2 { name="icesTAF"; version="3.3-3"; sha256="1jah3f7hicw66rwa0jfpr489c81im3h4cjihmdmk4fgq2kjnrdyb"; depends=[bibtex lattice]; }; icesVocab = derive2 { name="icesVocab"; version="1.1-4"; sha256="0ydrxxmglgcsmjccamhfyw4cr2q583y4836v3wm2gxs5pcf9q86g"; depends=[XML]; }; icmm = derive2 { name="icmm"; version="1.1"; sha256="1w9f1rniz67rrvq0akc64s5433ddmr2cgbcljil4c58yyz8hinx8"; depends=[EbayesThresh]; }; - icosa = derive2 { name="icosa"; version="0.9.81"; sha256="05gpiksncdi536f4py7szfi6myny1gqj8i0hsgpma7cfcm3npn0l"; depends=[igraph raster Rcpp rgdal rgl sp]; }; + icosa = derive2 { name="icosa"; version="0.10.0"; sha256="1vd1qn1070rml7mygj9k13b96zrc77bw90g8f44s7wmhabn6214q"; depends=[igraph Rcpp sp]; }; icpsrdata = derive2 { name="icpsrdata"; version="0.4.0"; sha256="01whs8wssjx3qgdnc1ixh59gvn1bajqm5q3zj1jpw1dqjh71qzf0"; depends=[httr purrr rvest]; }; icr = derive2 { name="icr"; version="0.6.1"; sha256="1hmlh01p286zq26ya2x7hn4xba2g0q988pmvmxy6lfv0nigys0gs"; depends=[Rcpp]; }; icrf = derive2 { name="icrf"; version="1.0.0"; sha256="1qz4wv23hspbrfzrj80qmhi0759zh3gn23rnns18j3020f506jdd"; depends=[Icens]; }; @@ -8965,7 +8980,6 @@ in with self; { idar = derive2 { name="idar"; version="1.1"; sha256="0nac7sav4rrp6a94aqgp8qyb22wg7y7gc5n1dhid894yc9z47a5f"; depends=[ape FD picante spatstat]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; idbr = derive2 { name="idbr"; version="0.3"; sha256="02syk7fmif0xnddl8189vnl329r8mwl3iwv2rsf6cw7mwg30fhyw"; depends=[countrycode dplyr httr jsonlite]; }; - idealstan = derive2 { name="idealstan"; version="0.7.2"; sha256="0nn7i6gr1ggk43xn9a454jbrxhqxw37srjvz4va0kcc02wy5pxq9"; depends=[bayesplot BH dplyr forcats gghighlight ggplot2 ggrepel lazyeval Rcpp RcppEigen rlang rstan rstantools scales shinystan StanHeaders stringr svDialogs tidyr]; }; ideamdb = derive2 { name="ideamdb"; version="0.0.9"; sha256="1f4dcv6c8ny7pik547f4840vhll26mzfcijnfsiqx31xhn0gsizd"; depends=[dplyr ggplot2 stringr tidyr]; }; idefix = derive2 { name="idefix"; version="0.4.0"; sha256="03gmhmpdkiy0721k14ig6aaqj304kjgi3g9l9v5s59h716r1cfyv"; depends=[dplyr MASS mlogit Rcpp RcppArmadillo Rdpack scales shiny tmvtnorm]; }; idem = derive2 { name="idem"; version="4.0"; sha256="0zgc6b5gzgm5dhjqk1vkm94khizc8sngn3igv23z1v18g73vdxhi"; depends=[BH Rcpp RcppEigen rstan rstantools sqldf StanHeaders survival]; }; @@ -8973,7 +8987,7 @@ in with self; { identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; }; ideq = derive2 { name="ideq"; version="0.1.4"; sha256="06xk9ghvh3fb79lbkmbqsk07xj06qaigiw41rzbi3bji3fjq1prw"; depends=[matrixcalc mvtnorm pdist Rcpp RcppArmadillo rgen]; }; ider = derive2 { name="ider"; version="0.1.0"; sha256="021s4fybki7a6mdsr6gkjrzfhaqdcg0m2a6r24y91jklxlxqxmws"; depends=[FNN]; }; - idiogramFISH = derive2 { name="idiogramFISH"; version="1.12.1"; sha256="0apmq28pb7wj4pyd3iv9872mq7bp5qrx5kiz9f6swlvr7mc0js1m"; depends=[crayon dplyr plyr]; }; + idiogramFISH = derive2 { name="idiogramFISH"; version="1.14.2"; sha256="0mcg92z9lf1gzmdka3wspy1y7hpkkwfghfplipqc9fbq20zrz3ig"; depends=[crayon dplyr tidyr]; }; idm = derive2 { name="idm"; version="1.8.2"; sha256="04f0i0kwdxywmj2i184knx5a5v9svx0lbam6wpz49hghg7qpy0w5"; depends=[animation ca corpcor dummies ggplot2 ggrepel]; }; idmTPreg = derive2 { name="idmTPreg"; version="1.1"; sha256="1329sjb4dnw3yiyg16whbj4l2v0kg8phg1x4ysvyp2kqkmw14yq6"; depends=[doParallel foreach survival]; }; idmodelr = derive2 { name="idmodelr"; version="0.3.1"; sha256="147rlcm7dj20xbwi392w82m1mnw90mvcp4yjgfplm34z6y90ljir"; depends=[deSolve dplyr furrr future ggplot2 magrittr purrr rlang stringr tibble tidyr viridis]; }; @@ -8982,11 +8996,11 @@ in with self; { idx2r = derive2 { name="idx2r"; version="1.0.0"; sha256="14d3rasnf8mghwzpg6h4larybgy7drrv0jh71x28qwry49acsqyh"; depends=[]; }; ie2misc = derive2 { name="ie2misc"; version="0.8.5"; sha256="1i59836a3kjsra5ibk66ic35yqk28p3biylall8gngjssiig92c1"; depends=[data_table gWidgets2 gWidgets2tcltk lubridate openxlsx qdap reader readxl stringi]; }; ieeeround = derive2 { name="ieeeround"; version="0.2-0"; sha256="0xaxrlalyn8w0w4fva8fd86306nvw3iyz44r0hvay3gsrmgn3fjh"; depends=[]; }; - iemisc = derive2 { name="iemisc"; version="0.9.7"; sha256="152qmwyfpdzif9wbjk6j60sfamy8l2fhrr3vjw5m3c05grczyn7m"; depends=[CHNOSZ data_table fpCompare gsubfn IAPWS95 iemiscdata listless pracma r_import rgdal sp stringi testit units zoo]; }; + iemisc = derive2 { name="iemisc"; version="0.9.8"; sha256="0xpgafv1zl3gxs3jydqni5icdz74n7f0bgbdvw8gykrr1a6rarln"; depends=[CHNOSZ data_table fpCompare gsubfn IAPWS95 iemiscdata pracma r_import rgdal sp stringi testit units zoo]; }; iemiscdata = derive2 { name="iemiscdata"; version="0.6.1"; sha256="0a9x90kisgmrka0frk9myb1qdq3nl092n78wrif31b42arifa8h9"; depends=[]; }; iemisctext = derive2 { name="iemisctext"; version="0.9.99"; sha256="02rr7sjjbrvfxwjl87f2ki245a8cw5fvx7z2z4rl8ixxlyxj9p5v"; depends=[]; }; ifa = derive2 { name="ifa"; version="7.0"; sha256="1cxafd7iwvyidzy27lyk1b9m27vk785ipj9ydkyx9z1v0zna2wnl"; depends=[mvtnorm]; }; - ifaTools = derive2 { name="ifaTools"; version="0.20"; sha256="0fkhnfnpa41z8hw72jgfqwgbfgzfqqnl8j2xwnqng1jymrwx97jv"; depends=[ggplot2 OpenMx reshape2 rpf shiny]; }; + ifaTools = derive2 { name="ifaTools"; version="0.21"; sha256="1vnrf67d0b83nmvk91sw1w2lgjlldp7dslxnrxh7lb94h3z6jigd"; depends=[ggplot2 OpenMx reshape2 rpf shiny]; }; ifctools = derive2 { name="ifctools"; version="0.3.2"; sha256="18g0l0vh9z4nvl6jil32983c4z1dvawrivi4kz4g562q3habm279"; depends=[]; }; ifs = derive2 { name="ifs"; version="0.1.5"; sha256="03g9cgs0zp89b1d7rpcn5clkvmg0spnariwrifd8hha476ldvfcy"; depends=[]; }; ifultools = derive2 { name="ifultools"; version="2.0-5"; sha256="040kvbczcmmbaiaz0k0pdq9af541pjj6iwzh1a3w4szh9w6b5a3j"; depends=[MASS splus2R]; }; @@ -9004,29 +9018,30 @@ in with self; { ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; }; imageData = derive2 { name="imageData"; version="0.1-59"; sha256="096y589r1mrbvzax5i7sdczkl613kyn8g93qcddqb6jjljw03qmi"; depends=[dae GGally ggplot2 Hmisc RColorBrewer reshape XLConnect]; }; imagefluency = derive2 { name="imagefluency"; version="0.2.3"; sha256="0f4kizxc86q6pgx5dbp14y6866b1ldyf7zgpfikd2iqhvxbs7qwa"; depends=[magick OpenImageR pracma R_utils readbitmap]; }; - imagefx = derive2 { name="imagefx"; version="0.3.0"; sha256="1jw85kb2xxq1yzjnvpd8l5avvamyh12kimss7w31ry2wgsad2mdz"; depends=[moments signal]; }; - imager = derive2 { name="imager"; version="0.41.2"; sha256="19fqgjhg04garbipx20g72h9dd6k0jj4ac48nby6km4h665vrs4v"; depends=[Cairo downloader igraph jpeg magrittr plyr png purrr Rcpp readbitmap stringr]; }; + imagefx = derive2 { name="imagefx"; version="0.4.1"; sha256="1mxd33y8zbq8kig6m6xihb5w8wrjppgmpyjspvaxjwk7si9a09k1"; depends=[moments signal]; }; + imager = derive2 { name="imager"; version="0.42.1"; sha256="1d7a49lcna77wyfjf5q1b89jck3p3vnysnkgz4drb0qkpy6hz76b"; depends=[downloader igraph jpeg magrittr png purrr Rcpp readbitmap stringr]; }; imagerExtra = derive2 { name="imagerExtra"; version="1.3.2"; sha256="1f6mxfn7am4ph9acbbx53r4bk4vsm73p7arh8rvrsic9pgma3gqf"; depends=[fftwtools imager magrittr Rcpp]; }; imageviewer = derive2 { name="imageviewer"; version="0.1.0"; sha256="1rsrwy5v0gnsmbay1zqijhvll2l1bs844m52w65588j9nlx4fci9"; depends=[htmlwidgets]; }; - imagine = derive2 { name="imagine"; version="1.5.2"; sha256="1k017a1qw7bahk1aif3ky7f1aynvrppmhvxbcmai646pmx99kbxn"; depends=[Rcpp]; }; + imagine = derive2 { name="imagine"; version="1.5.3"; sha256="1ss0gm769s8cmma3hnah15vmc2c5wxn0l3s4vas7jbvkwi62am6h"; depends=[Rcpp]; }; imbalance = derive2 { name="imbalance"; version="1.0.2"; sha256="1vkzxm8wb9g1mibnlp63gnky2gcgai5j09v63zki3jpxwxwli4nx"; depends=[bnlearn C50 FNN ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo smotefamily]; }; imdbapi = derive2 { name="imdbapi"; version="0.1.0"; sha256="11v7c0s7qqf02b186md5lhgkgmywkn8lmmanlz3gfcxca26g047y"; depends=[dplyr httr stringr]; }; imfr = derive2 { name="imfr"; version="0.1.7"; sha256="1ch05d37gp0niml80k2apab1942aa05r77s52vgh2pfcx9kklv20"; depends=[dplyr httr jsonlite]; }; imgpalr = derive2 { name="imgpalr"; version="0.3.0"; sha256="1kb1ggrlkrh086nwq47sf2y20r7ydk4ww2j3gq0s4iz00aa34pxg"; depends=[downloader dplyr farver jpeg magrittr tibble]; }; imgrec = derive2 { name="imgrec"; version="0.1.0"; sha256="1v4q2hxil7f0jnj4nql44d9dssh8kz1mnj8ah5slndnn1fbymy8f"; depends=[base64enc dplyr httr jsonlite knitr rlang]; }; imguR = derive2 { name="imguR"; version="1.0.3"; sha256="14f7ghgc8rbrpqb21rinfbrj1wh80i6ii0awwi814152v5qzj4b3"; depends=[httr jpeg png]; }; - imgw = derive2 { name="imgw"; version="0.2.0"; sha256="00zkjxqnw1zwcpj8mmdw1ydpcq0sbhs54ismm1i8r6ymb13j5fgj"; depends=[RCurl XML]; }; + imgw = derive2 { name="imgw"; version="0.3.0"; sha256="1kmayimhpg0dl51c4mvpi1l22y9zrw2k0s62pbrdc2x7pxsh0ypx"; depends=[RCurl XML]; }; iml = derive2 { name="iml"; version="0.9.0"; sha256="15rv943q1kqilsr1h0pkm2gci1cl7775xma4swjfmbqmdc6acjq0"; depends=[checkmate data_table foreach Formula ggplot2 glmnet gridExtra Metrics partykit prediction R6 yaImpute]; }; immer = derive2 { name="immer"; version="1.1-35"; sha256="1nmf9wxxyq3p8b5kikpsr8b0v4s84zjpahg1rxvcrhc8blg26hjq"; depends=[CDM coda MASS psychotools Rcpp RcppArmadillo sirt TAM]; }; immuneSIM = derive2 { name="immuneSIM"; version="0.8.7"; sha256="0brj12xnkzmn3n91vb39fq3q68wmzmwx9l38dl38yypp0l8pknjl"; depends=[Biostrings data_table ggplot2 ggthemes igraph Metrics plyr poweRlaw RColorBrewer repmis reshape2 stringdist stringr]; }; imp4p = derive2 { name="imp4p"; version="0.8"; sha256="0k126zp38n1bw3q0b77smr6plpcim87i66amvwbv61w84ansgbv6"; depends=[Iso norm Rcpp truncnorm]; }; impactflu = derive2 { name="impactflu"; version="0.1.0"; sha256="0wpaq2q61g6hl9fffs5cjbzdz1qc8dxsbknfs0iarwkn08460bn5"; depends=[dplyr glue lubridate magrittr Rcpp rlang tibble]; }; impimp = derive2 { name="impimp"; version="0.3.1"; sha256="0xkxph4f1rcpkryx9v339bfbsnq3xwdj1flb4j2dgh99apj126sq"; depends=[]; }; - implicitMeasures = derive2 { name="implicitMeasures"; version="0.1.0"; sha256="0j0mzsfli9m063nmy547jcwrzbdqs3m06k9jj4bjn8fdv45pabzk"; depends=[dplyr ggplot2 plyr qpdf tidyr xtable]; }; + implicitMeasures = derive2 { name="implicitMeasures"; version="0.1.1"; sha256="1wz4d7gnpldv4ijc94vpginwx48ja3mwal35z7vb6kygmmqnf98q"; depends=[dplyr ggplot2 stringr tidyr xtable]; }; + implied = derive2 { name="implied"; version="0.2.5"; sha256="0bw45vl19xvprh37rikmhh1dhykpgqy4pbq6l8pgdf7h118mvy2g"; depends=[]; }; implyr = derive2 { name="implyr"; version="0.3.0"; sha256="1i0m95azyi46wnh59dcs52l78i1yqy677rlr4b6c0r945m67advn"; depends=[assertthat DBI dbplyr dplyr rlang tidyselect]; }; r_import = derive2 { name="r_import"; version="1.1.0"; sha256="0blf9539rbfwcmw8zsb4k58slb4pdnc075v34vmyjw752fznhcji"; depends=[]; }; importar = derive2 { name="importar"; version="0.1.1"; sha256="0xv445fmjhsbdlsq03k2rlycnggn3rcyq5a49zrg4jvjamzr0rgr"; depends=[]; }; - importinegi = derive2 { name="importinegi"; version="1.0.0"; sha256="0rlnvc2m0cy5jqvylfbgg31dxpdsd37ca1bcpwcpgwcx3d3l373j"; depends=[data_table dplyr foreign haven rgdal]; }; + importinegi = derive2 { name="importinegi"; version="1.1.0"; sha256="1jb2ls5zi3lcfja53p8lx94cj1saw5nwp4023v5iwy86gg1lddc9"; depends=[data_table dplyr foreign haven rgdal]; }; imptree = derive2 { name="imptree"; version="0.5.1"; sha256="0f087000092ydnpj3ch4mbip8wp32scn8xw4vlkq5lf6130gfs1b"; depends=[Rcpp]; }; imputeFin = derive2 { name="imputeFin"; version="0.1.0"; sha256="1k61q4cd3j7rj0d35y3gyahjz4ac970m6mifc9pzxryi3w5373c4"; depends=[MASS zoo]; }; imputeLCMD = derive2 { name="imputeLCMD"; version="2.0"; sha256="10v3iv1iw6mnss6ry836crq9zdgid2y1h3pvigzjsrmnp5n89mfz"; depends=[impute norm pcaMethods tmvtnorm]; }; @@ -9041,8 +9056,7 @@ in with self; { imsig = derive2 { name="imsig"; version="1.0.0"; sha256="01ww48x9a189dvr81bangfhchr70l0sg26jdpcxf41nh2fmslfxx"; depends=[ggplot2 gridExtra HiClimR igraph RColorBrewer survival]; }; in2extRemes = derive2 { name="in2extRemes"; version="1.0-3"; sha256="1lgsqm29zmjyf8kynyra2p3q7bs4fyd7ac4v6s3pbahzhhzdk94y"; depends=[extRemes]; }; inTrees = derive2 { name="inTrees"; version="1.2"; sha256="1mwn2ijkyw0y9xcgrr56wxd2326ikarlsi79l59dplvlx2iwbi6c"; depends=[arules data_table gbm RRF xgboost xtable]; }; - inaparc = derive2 { name="inaparc"; version="0.2.0"; sha256="0rgbnvvqzbx4j40qz32l1bxmg3wwzbl6719wb9m3xpakblvhhxs2"; depends=[kpeaks lhs]; }; - inarmix = derive2 { name="inarmix"; version="0.4"; sha256="11a1vaxq22d5lab07jp5pw0znkaqj6bmkn6vsx62y6m4mmqk04yr"; depends=[Matrix Rcpp]; }; + inaparc = derive2 { name="inaparc"; version="1.1.0"; sha256="0ni34bkl7v1ypci8j8qhkfbf7gnx77wi4v9w1ww18z2jizsrk5h3"; depends=[kpeaks lhs]; }; inbreedR = derive2 { name="inbreedR"; version="0.3.2"; sha256="09fr13ckyn2skiigkn4qdx5g080gcmyyrvzhcp0wrml9wpmy0h4z"; depends=[data_table]; }; incR = derive2 { name="incR"; version="1.1.0"; sha256="0q41bs7pf6hqyfwvcwc2sxq44jq95qq3qsddz53f8gphwjsyf1v7"; depends=[dplyr ggplot2 lubridate maptools rgeos]; }; inca = derive2 { name="inca"; version="0.0.4"; sha256="1r3niibd6pja59am8in9gpyvxi2g5bh8bqqhdixzwaj3xzyyipii"; depends=[Matrix Rcpp RcppArmadillo]; }; @@ -9051,7 +9065,7 @@ in with self; { incidence = derive2 { name="incidence"; version="1.7.0"; sha256="1ljn9phxsf47qp12xv1ly76lm4gcqfnhrisx4sy9f6pz5rx6k5s3"; depends=[aweek ggplot2]; }; inctools = derive2 { name="inctools"; version="1.0.15"; sha256="0ikldiwgizs2p9vcalk5729dr6krysnyr4ni0ybg9gljw7iafdlf"; depends=[binom cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma rlang tibble tmvtnorm]; }; indelmiss = derive2 { name="indelmiss"; version="1.0.9"; sha256="0i4qnvc0xb3ngnk8xdscmx7qnicfs7s6czawf6schb1nh2pjpzyq"; depends=[ape numDeriv phangorn Rcpp]; }; - indicspecies = derive2 { name="indicspecies"; version="1.7.8"; sha256="1j70plalgn9y69m958q5jxhrzd14prcjbniiljnjl243xbbydgv9"; depends=[permute]; }; + indicspecies = derive2 { name="indicspecies"; version="1.7.9"; sha256="1xza0ha42frz5wizf268j49y3201vpsm4kgj0czsw9wygzjl008f"; depends=[permute]; }; indirect = derive2 { name="indirect"; version="0.2.0"; sha256="1k7xwsx655nzl43s1mkaysyn5gydq973gynmqip67lssnm7cnch4"; depends=[gplots MASS]; }; inegiR = derive2 { name="inegiR"; version="3.0.0"; sha256="1rhkdmpz7mxi7ddyygss5rlh3c8hgxhzdk3fnvnlizc1l55cc6c0"; depends=[jsonlite lubridate plyr tibbletime XML zoo]; }; ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; }; @@ -9064,7 +9078,9 @@ in with self; { inflection = derive2 { name="inflection"; version="1.3.5"; sha256="1xyx2jnvyjn7n1xsg3m2qpl03qrnmlp9b8fa2h77f922fwj1zxgv"; depends=[]; }; influence_ME = derive2 { name="influence.ME"; version="0.9-9"; sha256="0f6d2hvs9qllyfpsp2cgh7w8yjxafclbk47n8av7j9zpp7s5yg9v"; depends=[lattice lme4 Matrix]; }; influence_SEM = derive2 { name="influence.SEM"; version="2.2"; sha256="1cabl6486mlrmk0418s18wii3n6nl1ckv6w9281wdk4fy27y9qk2"; depends=[lavaan]; }; + influenceAUC = derive2 { name="influenceAUC"; version="0.1.1"; sha256="10iflbcx3hrd0f7y0izkpc9xkhn5bi8if8qdqk8151idzwq6g2jp"; depends=[dplyr geigen ggplot2 ggrepel ROCR]; }; influenceR = derive2 { name="influenceR"; version="0.1.0"; sha256="12p9362hkndlnz1rd8j2rykg57kbm6l7ks60by3rd25xg50k5jag"; depends=[igraph Matrix]; }; + influential = derive2 { name="influential"; version="0.1.0"; sha256="057nz5p7m903s78656wvw073w62xw783wf2r14xcdw5sj24c7lcl"; depends=[igraph]; }; influxdbr = derive2 { name="influxdbr"; version="0.14.2"; sha256="03dzw86mvbc8w38q9skjki1z17vc04k9q8dx7sd3xg6xbr10f9d9"; depends=[dplyr httr jsonlite magrittr purrr rlang tibble tidyr xts zoo]; }; infoDecompuTE = derive2 { name="infoDecompuTE"; version="0.6.1"; sha256="04fgmz58nvw0jwbj8y1r42ny84024h47w9cc0z96aqag5kg1wmxm"; depends=[MASS]; }; informR = derive2 { name="informR"; version="1.0-5"; sha256="16pz47wlr1gr8z5hdnrjpczm967khqiqgdfiw15a0bby6qdvni2y"; depends=[abind relevent]; }; @@ -9072,10 +9088,10 @@ in with self; { infra = derive2 { name="infra"; version="0.1.2"; sha256="0jycnnmrrjq37lv67xbvh6p63d6l4vbgf3i1z9y7r75d6asspzn1"; depends=[]; }; infraFDTD_assist = derive2 { name="infraFDTD.assist"; version="0.6"; sha256="04j5nl5vxk79iciz6s9bpiyn319c2dbh7fdahgwira2r30w2fxv9"; depends=[fields]; }; infutil = derive2 { name="infutil"; version="1.0"; sha256="02d0hfbkdqjj0lm1fzwwxy60831kbcjn2m4rfblpib0krkbpz72n"; depends=[ltm]; }; - ingredients = derive2 { name="ingredients"; version="0.5.0"; sha256="1vq3ym3vvjz11ixi0ggmqggw7s88ha7kk1y6li5cpnsjiqqyv09k"; depends=[DALEX ggplot2 scales]; }; + ingredients = derive2 { name="ingredients"; version="1.1"; sha256="0aim57f7b1pfb6cv28m8xlca40d84gickq32mzikqn20ini27xw7"; depends=[DALEX ggplot2 gridExtra scales]; }; ini = derive2 { name="ini"; version="0.3.1"; sha256="04yqij344dwm0xqgara8xia42mlmij3i8711qbb5534w05a1l6bv"; depends=[]; }; injectoR = derive2 { name="injectoR"; version="0.2.4"; sha256="0sa32cspp6y3m04yfmd02kxx55mk7l9jxf4r9pk1a6k3sqnj6fl8"; depends=[]; }; - inlabru = derive2 { name="inlabru"; version="2.1.12"; sha256="0ry32hsf9f4hd1jka51d7jbxlalhknwnc3zj9i9bggx38bb9w9fg"; depends=[ggplot2 Matrix rgdal rgeos sp]; }; + inlabru = derive2 { name="inlabru"; version="2.1.13"; sha256="1khsfhays6xna060f4h0rc7yjsq89xl42d36fy33ixgk0rh9vlnc"; depends=[ggplot2 Matrix rgdal rgeos sp]; }; inline = derive2 { name="inline"; version="0.3.15"; sha256="0s4wssvpan189fijahknxq5s22ww9bzmdlmyhnra748r7khky17z"; depends=[]; }; inlinedocs = derive2 { name="inlinedocs"; version="2019.12.5"; sha256="11d8cnrzgq95w7hn234rcwrr1mmrv63f69807pnzxizxbgnp7wz3"; depends=[]; }; inlmisc = derive2 { name="inlmisc"; version="0.4.9"; sha256="0yd8bysa5l3ihypckmx4g5zh176s6p4xsyw5pavc6pz8239wj5k2"; depends=[checkmate data_table GA htmltools htmlwidgets igraph knitr leaflet raster rgdal rgeos rmarkdown scales sp tinytex xtable yaml]; }; @@ -9084,18 +9100,18 @@ in with self; { inplace = derive2 { name="inplace"; version="0.1.0"; sha256="1lmvfjxgficlzxbn953wvfa1n9lys9gqprix6zbqqr4d6vkm0srj"; depends=[Rcpp]; }; insect = derive2 { name="insect"; version="1.2.0"; sha256="0lbck8jbhymzkhm1iqd2y2xg8a26yjizw7x31b1l1kqc1l0p3kmv"; depends=[ape aphid kmer openssl phylogram RANN seqinr xml2]; }; insideRODE = derive2 { name="insideRODE"; version="2.0"; sha256="1ffndk8761cpkririb3g1qsq9nwmh82lcrpql9i5fksdprvdjzcw"; depends=[deSolve lattice nlme]; }; - insight = derive2 { name="insight"; version="0.8.0"; sha256="1bkcwvjpfy4q4k478x8x42yiqz6v0fk6z6hfp6fli3h63smlmck0"; depends=[]; }; + insight = derive2 { name="insight"; version="0.8.2"; sha256="0fjf7dwpv1a7qfbzixppg348z1ksq19kdjm08vcb2am7w0k3plcj"; depends=[]; }; insol = derive2 { name="insol"; version="1.2.1"; sha256="1d2vqmbp94ff80mfkmq4a8y12r6ryym8hh1568ip9qbn7snc64v1"; depends=[raster]; }; inspectdf = derive2 { name="inspectdf"; version="0.0.7"; sha256="03yli2fiyb3kw189aga9hiyxm9f9b2lhpx1cjv9silfgm0xj54lh"; depends=[dplyr ggfittext ggplot2 magrittr progress Rcpp tibble tidyr]; }; instaR = derive2 { name="instaR"; version="0.2.4"; sha256="0c4m471ragkpksr0h21cdgnjxcknf01xqz543dahxgzjg9ncjwhg"; depends=[httr jsonlite]; }; install_load = derive2 { name="install.load"; version="1.2.1"; sha256="148q0rjal5hfcb8ilxzd1bz38mn8vxqrsfg5x4jy48psk00fk3d9"; depends=[]; }; insuranceData = derive2 { name="insuranceData"; version="1.0"; sha256="0wryh8i1v3bnpbqn6d6dpxr9bwwl6mnh5cb5igz0yanh4m1rx96w"; depends=[]; }; - insurancerating = derive2 { name="insurancerating"; version="0.4.3"; sha256="0m4ndbyinmqd1207qmw796zm7xs10bqyc5k3pqvvjy765fcni95k"; depends=[classInt data_table evtree ggplot2 lubridate mgcv stringr]; }; + insurancerating = derive2 { name="insurancerating"; version="0.5.0"; sha256="12xfq5m1qcwwg5lkvzxwxsp3ihs0xj6mf10vlx9553xrzh1n7zwl"; depends=[classInt data_table dplyr evtree ggplot2 lubridate mgcv stringr]; }; intRegGOF = derive2 { name="intRegGOF"; version="0.85-5"; sha256="0xjq8vdlgqlzrvp752gd4qfrpnpapx7k6xzfsvfril8ngvm9a162"; depends=[]; }; intRvals = derive2 { name="intRvals"; version="1.0.0"; sha256="0391raj5wq6issvzqm8bfnv1ap2hh5nfsqi9r1x5ss37fvcq5fjm"; depends=[lme4 plyr]; }; intamap = derive2 { name="intamap"; version="1.4-9"; sha256="060sghkqsdrxpa340rvjskh2wafdkffa5q8nlbg1msnsmk639lkn"; depends=[automap doParallel evd foreach gstat MASS mvtnorm rgdal sp]; }; intamapInteractive = derive2 { name="intamapInteractive"; version="1.1-12"; sha256="1h8kzinfpp2rwal11xqs9g99rmigs0jlsr5h0qh0zsill73minid"; depends=[automap gstat intamap rgdal sp spatstat spcosa]; }; - intccr = derive2 { name="intccr"; version="3.0.1"; sha256="1yp94cr59i120aqbzss48b4n6z29dcgd97qz06vnh812lfrj1wxd"; depends=[alabama doParallel foreach MASS]; }; + intccr = derive2 { name="intccr"; version="3.0.2"; sha256="1v2zhyap414w41dgy2jjz3fnrvk0vawf02dvb1nprrid7fqsnf9i"; depends=[alabama doParallel foreach MASS]; }; intcensROC = derive2 { name="intcensROC"; version="0.1.1"; sha256="0qkgp6iw2s772zk2533jsar64f5mqgy4874swgarnfgd4jvkwy2k"; depends=[pracma Rcpp RcppEigen]; }; intdag = derive2 { name="intdag"; version="1.0.1"; sha256="0mb0a1ccc67clfa75b4hl901zdmx7fxw713c4ybx3i5wc2ldl8ph"; depends=[]; }; intePareto = derive2 { name="intePareto"; version="0.0.1"; sha256="0mynqvmdb39zqx1z2y6bscfjkwf880b7pd149xsdbc6f49hlnfw6"; depends=[apeglm biomaRt DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges rPref Rsamtools]; }; @@ -9105,7 +9121,6 @@ in with self; { interAdapt = derive2 { name="interAdapt"; version="0.1"; sha256="06ki36l1mrnd9lbm696a6gapr488dz8na4wvl9y1fif9hfv4zk25"; depends=[knitcitations knitr mvtnorm RCurl shiny]; }; interactionTest = derive2 { name="interactionTest"; version="1.2"; sha256="0ycr839l07xahakr4r2jvlmd0fcxfm4qi3g8agnyh24c2kwl3ck2"; depends=[]; }; interactions = derive2 { name="interactions"; version="1.1.1"; sha256="0xsqsylfgqgdy7bh32v8x0yn5naf1jclv05dvpyvhladgd0q1c0m"; depends=[cli crayon generics ggplot2 jtools rlang tibble]; }; - intercure = derive2 { name="intercure"; version="0.1.0"; sha256="0j71dqcbcfl1zpfidh3xys5h3ggyhrzq3avkdm9v18pv464x8xlv"; depends=[foreach iterators MASS Matrix survival]; }; interep = derive2 { name="interep"; version="0.3.0"; sha256="03a51vambjl7gwxk43k47iff65lc6xs66vmkiw3dhxjr3b3nxrh8"; depends=[MASS Rcpp RcppArmadillo]; }; interferenceCI = derive2 { name="interferenceCI"; version="1.1"; sha256="19ky10nn6ygma6yy5h1krxx61aikh3yx5y39p68a944mz8f72vsn"; depends=[gtools]; }; interflex = derive2 { name="interflex"; version="1.0.8"; sha256="117bq8cid36v6d2lrcywv5xqh6wm2z0fj9hwkjzwqhfkd8qhpq0a"; depends=[doParallel foreach ggplot2 lfe Lmoments lmtest mgcv pcse Rcpp RcppArmadillo sandwich]; }; @@ -9123,8 +9138,9 @@ in with self; { intervals = derive2 { name="intervals"; version="0.15.1"; sha256="1r2akz8dpix1rgvdply4r3m2zc08r0n96w9c97hma80g61a3i2ws"; depends=[]; }; intervcomp = derive2 { name="intervcomp"; version="0.1.2"; sha256="1l6x1fl84li6is3b92b96q3fbv0rpgqy2lvw9cbi2cq8nh9imnyx"; depends=[]; }; interventionalDBN = derive2 { name="interventionalDBN"; version="1.2.2"; sha256="0wpp4bfi22ncvl0vdivniwwvcqgnpifpgxb4g5jbyvr0z735cd9w"; depends=[]; }; - intkrige = derive2 { name="intkrige"; version="1.0.0"; sha256="1x0jg4vdbf3ipns1slw2pb1myiswnpka9lyxma69lgk2nmwmz9p2"; depends=[gstat raster Rcpp RcppArmadillo Rdpack sp]; }; - intoo = derive2 { name="intoo"; version="0.3.1"; sha256="0i1141r95zv8sv6l047avsgyq1kbxilczrhsn6gkvjg5vkmqn9rr"; depends=[]; }; + intkrige = derive2 { name="intkrige"; version="1.0.1"; sha256="1p3fn5nzn1iliy025187k590qrsw3z3d47p67gzwwd6h050yrl86"; depends=[gstat raster Rcpp RcppArmadillo Rdpack sp]; }; + intmed = derive2 { name="intmed"; version="0.1.1"; sha256="1y9ryz7sxhal4s35cbplfs67596dh57kqy10wyg49x8aq80gpgnr"; depends=[doParallel dplyr EValue foreach MASS mice stringr tibble tidyverse]; }; + intoo = derive2 { name="intoo"; version="0.4.0"; sha256="0s4jii34cgvyi573z569l1827yf90vj4ih9krsgvpbvk7lfdbagg"; depends=[]; }; intrinsicDimension = derive2 { name="intrinsicDimension"; version="1.2.0"; sha256="0cka20ifxx9njnvp18bzhrvmh3cwjnxkc0a23qzi43dahc51ijbc"; depends=[yaImpute]; }; introgress = derive2 { name="introgress"; version="1.2.3"; sha256="1j527gf7pmfy5365p2j2jbxq0fb0xh2992hj4d7dxapn4psgmvsk"; depends=[genetics nnet RColorBrewer]; }; intrval = derive2 { name="intrval"; version="0.1-1"; sha256="1p66cjpn43xib7rrnyv3jqr6bb49d3dxf888p8hxnr7kx9wfalkn"; depends=[]; }; @@ -9141,15 +9157,15 @@ in with self; { investr = derive2 { name="investr"; version="1.4.0"; sha256="0l47bfwxssfr3maprkpwnmgxnxccl3ch4grc7f968iiqk83mcxw9"; depends=[nlme]; }; invgamma = derive2 { name="invgamma"; version="1.1"; sha256="12ga2y4wc9bc5zz6vimvxwgjpsx3ys3209nq63gscbw559ydxa5a"; depends=[]; }; io = derive2 { name="io"; version="0.3.2"; sha256="1cyl8wvbngdrdkkckng1bs699rjp737j99kbd8r155fjj0370nx4"; depends=[filenamer stringr]; }; - ioanalysis = derive2 { name="ioanalysis"; version="0.2.1"; sha256="14bmi6kk8ra9b7px3l98sdm1zjr8516cfkya8fpdfbaxqjdv4byj"; depends=[ggplot2 plot3D]; }; ioncopy = derive2 { name="ioncopy"; version="2.1.1"; sha256="1lkav3xvh2qazfmcxwisrjy8wzf639a4md71499jj5rmy650crys"; depends=[shiny]; }; ionflows = derive2 { name="ionflows"; version="1.1"; sha256="1k9yz82hbjwljyg4cmi675ppykrc2yq9md8x1hhkfxmp070whcxl"; depends=[Biostrings]; }; ionr = derive2 { name="ionr"; version="0.3.0"; sha256="18rv5n5gihb6pz36s45yj17sdjsbj4485k4lnggdjj1gbbjkz2ni"; depends=[gplots psych]; }; iopsych = derive2 { name="iopsych"; version="0.90.1"; sha256="0adxwxnb1zdlld3icdggx7cq6cp8z4h1jf105485w322a8c6s9ik"; depends=[mco mvtnorm]; }; iosmooth = derive2 { name="iosmooth"; version="0.94"; sha256="06xgzhjgb6pznjzfli193q7kn8sh5jmqsssgymwj98bw7iwn4q3z"; depends=[]; }; iotables = derive2 { name="iotables"; version="0.4.2"; sha256="1ds6j8x965fc2j11r507ljqwcaam0zz5q2vkhq9gkl53fjfgajlk"; depends=[dplyr eurostat forcats kableExtra knitr lubridate magrittr plyr purrr readxl tibble tidyr]; }; - iotools = derive2 { name="iotools"; version="0.2-5"; sha256="0rn6kvlcijnhlwajh6nmi80qlamxgz0x3pn09yp4hyfpl3zxg1fz"; depends=[]; }; + iotools = derive2 { name="iotools"; version="0.3-1"; sha256="0x24s38shvgqvxpx57qjf86g6f9p9y201yymdl61n5yw439pg88f"; depends=[]; }; ip2location = derive2 { name="ip2location"; version="8.0.0"; sha256="1rhy3jlcl4hcynhjgy3gjx9g9kyn30gq1jwfpll23jixvmrx64by"; depends=[jsonlite reticulate stringr]; }; + ipaddress = derive2 { name="ipaddress"; version="0.1.2"; sha256="0nr0yqxda6d825f7ivwhmcnxzj0fhr1wz2k2f033lhgjax8ghpzx"; depends=[AsioHeaders assertthat Rcpp vctrs]; }; ipc = derive2 { name="ipc"; version="0.1.3"; sha256="10h54j83l7khk1lkpdwn6hwaz31i3v6svg4q1lxzvr2aqdsj7hy0"; depends=[R6 shiny txtq]; }; ipcwswitch = derive2 { name="ipcwswitch"; version="1.0.3"; sha256="1pqlfkglgsahzsw7z9wsx7k0i9n0kx77g9p1j7i9dz7j74s6g09r"; depends=[survival]; }; ipdmeta = derive2 { name="ipdmeta"; version="2.4"; sha256="0k9wqpmrvqdh73brmdzv86a2dbyddjyyyqzqgp1vqb3k48k009s2"; depends=[nlme]; }; @@ -9160,6 +9176,7 @@ in with self; { ipfr = derive2 { name="ipfr"; version="1.0.1"; sha256="1gd2nh88xip7dw5sfb79b4g3jhhkzrqwii1vczcjdnghbk0yp96r"; depends=[dplyr ggplot2 magrittr mlr tidyr]; }; ipft = derive2 { name="ipft"; version="0.7.2"; sha256="0jifmkwac5yfl110200ljm3pas3321j068af9xqzqs0av20m8hps"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; }; iplots = derive2 { name="iplots"; version="1.1-7.1"; sha256="1bz8n9cnx6zy3wsr49h55r0l5ikfl0xjg4r76fi4giid2a3ba4lf"; depends=[png rJava]; }; + ipmisc = derive2 { name="ipmisc"; version="1.2.0"; sha256="0ga92xpq3inc1anwn4qr3xzrnlp79szb46ybvgyvxmg682wphlnf"; depends=[broomExtra crayon dplyr forcats rlang rstudioapi tibble tidyr zeallot]; }; ipptoolbox = derive2 { name="ipptoolbox"; version="1.2"; sha256="0scbny4crgr23qcp0vgsxhwmj5g5q5c1c4mb5mmb5njyvc34s01l"; depends=[AlgDesign copula evd kolmim triangle]; }; ipred = derive2 { name="ipred"; version="0.9-9"; sha256="0vs1hqfx7yd0xdbmfsf2gim7spkni0845cj6gswn0nhdfdq7ma0d"; depends=[class MASS nnet prodlim rpart survival]; }; iprior = derive2 { name="iprior"; version="0.7.3"; sha256="15qzqwikxy85fcd7psz363b5wb0kpi85icfyb47hbgdhln8fi2qb"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; }; @@ -9184,17 +9201,17 @@ in with self; { irtDemo = derive2 { name="irtDemo"; version="0.1.4"; sha256="0rpwryybnj7b4bxn0mn1m496y85s2fpqdd78lmdl6jg1ck4j4pb3"; depends=[fGarch shiny]; }; irtProb = derive2 { name="irtProb"; version="1.2"; sha256="12wnvbzkh0mx9i3iyh1v2n2f2wjsjj7ad3dgv9xj949x4nbz16j0"; depends=[lattice moments]; }; irtoys = derive2 { name="irtoys"; version="0.2.1"; sha256="0h6iiaxikhbxhbyksbjnb09qdxinlkwr2v9yzs5wslbni14paq5q"; depends=[ltm sm]; }; - irtplay = derive2 { name="irtplay"; version="1.4.0"; sha256="0v2zwb9jqfbbmfs8zshzvmmhz7g98pm3k9q83yb38q2zakvg1jip"; depends=[dplyr ggplot2 gridExtra pbapply purrr reshape2 rlang statmod tidyr]; }; + irtplay = derive2 { name="irtplay"; version="1.4.1"; sha256="0blc1jlj44rk9jgpffdwlx3pw1n72xkfi6mxb5mhd8qyc5ri1a8m"; depends=[dplyr ggplot2 gridExtra pbapply purrr reshape2 rlang statmod tidyr]; }; irtrees = derive2 { name="irtrees"; version="0.1.0"; sha256="03jmfyx1ia987zhi74fmmcdz70wnm8c7z5z30rwzd1cs11dijjwv"; depends=[]; }; irtreliability = derive2 { name="irtreliability"; version="0.1-1"; sha256="15qs8bvgrwajj5kfd57rd34l1p2805ilyd7w60ngrqc14d6az9d2"; depends=[fastGHQuad ltm mirt]; }; isa2 = derive2 { name="isa2"; version="0.3.5"; sha256="17vm0906szhrh2k5x694vwcfijbzmd1v3axpszfybc0lgds437cv"; depends=[lattice]; }; isdals = derive2 { name="isdals"; version="2.0-4"; sha256="15p432fskdz2r8523cw122mfhvrq8vdsdsrd0kz9yfin4b5z3zfh"; depends=[]; }; - isdparser = derive2 { name="isdparser"; version="0.3.0"; sha256="1fdp4zk3pzpi5m026rlsrhyl4r5rfxy9sr8d04w2i0316rziv7kc"; depends=[data_table tibble]; }; + isdparser = derive2 { name="isdparser"; version="0.4.0"; sha256="05xkffmiiyhas5hzdjdylbrvh6fjc2fjh7s00iwjxkp4ba7rwq3g"; depends=[data_table lubridate tibble]; }; isingLenzMC = derive2 { name="isingLenzMC"; version="0.2.5"; sha256="1pd1s3a1rv7vlxd5db1pgwdjps8w5im4zz2h3qzal9cwbis0hb51"; depends=[]; }; - island = derive2 { name="island"; version="0.2.4"; sha256="1jwqyrkxljhrxnd4jnfzm2bdgg192865nm1pxizbr7ws0b4z9fyi"; depends=[]; }; - islasso = derive2 { name="islasso"; version="1.1.0"; sha256="1kp94lscl738wlw0hn1xakcgi10zbxpnvkpvzj5ybwvpbjy3qb9a"; depends=[glmnet Matrix]; }; + island = derive2 { name="island"; version="0.2.5"; sha256="0kmrdxpfybmc9l3rqr1b7r1k0js2ri8r2rlg0zk1nd5m14p7c4l2"; depends=[]; }; + islasso = derive2 { name="islasso"; version="1.1.1"; sha256="1jqshk18g6fj51ppz8fxi2a2hydcqf469ff0h9k7lha7a46h26ff"; depends=[glmnet Matrix]; }; ismev = derive2 { name="ismev"; version="1.42"; sha256="19giigxwf62cdkf7mglsca649n2ignb9bxyg9zl7im1vm3ngnmqd"; depends=[mgcv]; }; - isni = derive2 { name="isni"; version="1.1"; sha256="0m7z8gxam4f3d0ggyk502c42aaxvjanxcv5c1p62jv13vgb0jrik"; depends=[Formula lme4 matrixcalc mixor mvtnorm nlme nnet]; }; + isni = derive2 { name="isni"; version="1.2"; sha256="1nw7i20fli3sg1g1dl17g8rz5bpx49gcmlyw4nvfyhdxqr38nb0r"; depends=[Formula lme4 matrixcalc mixor mvtnorm nlme nnet]; }; isnullptr = derive2 { name="isnullptr"; version="1.0.1"; sha256="0kwjxq59n3qncdw63vsdvz7v5mzbl5lmckdfgiiw35pzmahnxzh9"; depends=[]; }; isoband = derive2 { name="isoband"; version="0.2.0"; sha256="1r023s73qypnvpx18znr9ymylr022m90v65mz2jasn0a1kjrfcbq"; depends=[Rcpp testthat]; }; isoboost = derive2 { name="isoboost"; version="1.0.0"; sha256="0arah62y2gyjhrwjyf4hbzlzyvnx3594436pvk8jjcjyfk7bzr6c"; depends=[Iso isotone rpart]; }; @@ -9223,17 +9240,16 @@ in with self; { its_analysis = derive2 { name="its.analysis"; version="1.4.1"; sha256="0f3wn7d3j6c0hhg2gp439y5m3namlswgdln18xxbvzzr4s8kz0wx"; depends=[boot car forecast ggplot2 plyr]; }; itsadug = derive2 { name="itsadug"; version="2.3"; sha256="0wzdy82h05264n9cr84w5j98vz24was9hh1y0wdp56ws3dfbav9m"; depends=[mgcv plotfunctions]; }; itsmr = derive2 { name="itsmr"; version="1.9"; sha256="0dmijaq6q31irwrjqv5gq1yfbgggwb3m6rwbg4lx1r9l3cqays7i"; depends=[]; }; - itunesr = derive2 { name="itunesr"; version="0.1.3"; sha256="1czwkrqy3jqw1x0z5zj2kvp4p11s5zdiswwhx9jfxdcsg86zhr45"; depends=[curl jsonlite lubridate xml2]; }; iva = derive2 { name="iva"; version="0.1.0"; sha256="0dchb263ygilxapwsw2gpl18z12wcjsz8zz5fg7h068hmcysa88g"; depends=[Formula ucminf]; }; ivdesc = derive2 { name="ivdesc"; version="1.0.0"; sha256="134dia4wwg7pazc92ccsb3pmsp9kpszr3j5ziyh0ld53qdmcsmz3"; depends=[knitr purrr rsample]; }; ivfixed = derive2 { name="ivfixed"; version="1.0"; sha256="0a26zrkvz0ffq4zxdx5vhr1nvsi9c15s6gvc1zy2pddjz31x2xi5"; depends=[Formula]; }; - ivmodel = derive2 { name="ivmodel"; version="1.7.1"; sha256="0v8alqn141s9rymk29xqmdx7gpp8ivz4525afvarxmp9sm2rqq0q"; depends=[Formula ggplot2 Matrix reshape2]; }; + ivmodel = derive2 { name="ivmodel"; version="1.8.1"; sha256="0c0lzjvp9dzj92p65v5lqmr701ksklx06lf6fcylj2w9hczf5klw"; depends=[Formula ggplot2 Matrix reshape2]; }; ivmte = derive2 { name="ivmte"; version="1.1.0"; sha256="0a7m04n7lyqykfix0shjhbgnl502zlyigxb997v8wbmx9sx2vk56"; depends=[Formula]; }; ivpack = derive2 { name="ivpack"; version="1.2"; sha256="0cr5acjrn41d3q0b77hlg2jmsbf1msvys9gcavm1blsryg2bc03c"; depends=[AER lmtest sandwich]; }; ivpanel = derive2 { name="ivpanel"; version="1.0"; sha256="0irjmkw3nnd8ssidvj23lr0hihlhd9acsbaznh88lknx53ijc2qv"; depends=[Formula]; }; ivprobit = derive2 { name="ivprobit"; version="1.1"; sha256="05b5gf5gmi2yrkg61n7w12qlgpnjakd1z8hhqxy6py8hahsf84gm"; depends=[Formula]; }; ivregEX = derive2 { name="ivregEX"; version="1.0"; sha256="0zh3rqvhn8ald6lxv9kywy2v1p0nr9ijv6plhpbxc6k51zzsgyl8"; depends=[AER Formula lmtest sandwich]; }; - ivtools = derive2 { name="ivtools"; version="2.2.0"; sha256="183lfv18r763jki8i37b8hk1k1kiglmhvjnfzigqzkzqc4cwibm1"; depends=[ahaz data_table nleqslv numDeriv Rcpp survival]; }; + ivtools = derive2 { name="ivtools"; version="2.3.0"; sha256="1wv0r9dy893hafbbrjcjrphb8dgql71ya4zfbkl5dfp7d4ncfxl0"; depends=[ahaz data_table nleqslv numDeriv Rcpp survival]; }; ivx = derive2 { name="ivx"; version="1.0.0"; sha256="0gxq0w9cmgg17y7kdjxfzaq8nr4knashfav0vjpq6ba9jh5grk9l"; depends=[magrittr Rcpp RcppArmadillo tibble]; }; jSDM = derive2 { name="jSDM"; version="0.1.0"; sha256="0lkapg6v5lh53vnsg5hcr9qis8qimb6ilds23dqcyhi6w3dys9nb"; depends=[coda corrplot Rcpp RcppArmadillo RcppGSL]; }; jSonarR = derive2 { name="jSonarR"; version="1.1.1"; sha256="054q3ly471xa64yyz2as6vkr440ip1y8n5wl6s3zbhqy3bqkdqif"; depends=[jsonlite RCurl]; }; @@ -9241,7 +9257,7 @@ in with self; { jabr = derive2 { name="jabr"; version="0.1.2"; sha256="19hcg2jn7vxmnqwq1828396pgnq53nyw30s19rhy1d7rk5k7dy1p"; depends=[ckanr dplyr glue httr magrittr pillar purrr rappdirs rlang stringr tibble tidyr]; }; jaccard = derive2 { name="jaccard"; version="0.1.0"; sha256="1dmla6qc1k8iw2d7zfjqhf13gqd2lpsrj09yh47ljf994fpab936"; depends=[dplyr magrittr qvalue Rcpp]; }; jack = derive2 { name="jack"; version="1.1.1"; sha256="1mp7cfmh3bzfansb3dyqq347qk6kkf4ndn23pbd78h1xcb54555b"; depends=[DescTools gmp multicool mvp partitions]; }; - jackalope = derive2 { name="jackalope"; version="1.0.0"; sha256="1v2n8ip0nfrdpd263yvr9jnmz9yx9m76vdwds18wj8504y95fzcv"; depends=[ape R6 Rcpp RcppArmadillo RcppProgress Rhtslib zlibbioc]; }; + jackalope = derive2 { name="jackalope"; version="1.1.0"; sha256="0mhsns4q7q7m3dzwkskmrsz3ppp6xvrc89salg62kqhpcay324al"; depends=[ape R6 Rcpp RcppArmadillo RcppProgress Rhtslib zlibbioc]; }; jackknifeKME = derive2 { name="jackknifeKME"; version="1.2"; sha256="0c5shl6s46kz7a623gccqk2plrrf2g29nwr6vbny6009pq3jvzam"; depends=[imputeYn]; }; jackstraw = derive2 { name="jackstraw"; version="1.3"; sha256="02qcaf2p0fyni6n2zhd7vp65kniz74di0pf5jzz79jwj15cfd1b0"; depends=[cluster ClusterR corpcor irlba lfa qvalue rsvd]; }; jacpop = derive2 { name="jacpop"; version="0.6"; sha256="0kq6rn33civ2g6i5nwfqvcgmnn5k2dwmw60lkmz4ywm0y4xxlkai"; depends=[]; }; @@ -9267,16 +9283,18 @@ in with self; { jjb = derive2 { name="jjb"; version="0.1.1"; sha256="0y9yvnzg6xngz1fvzl5jm4yb1pg6wrp3id0gysv214wcznf3gna9"; depends=[]; }; jlctree = derive2 { name="jlctree"; version="0.0.1"; sha256="17n39jc7cwv6hiayy7h1859prdwy2j3pz1vhi6jqnzm4wy6p8a9a"; depends=[lme4 rpart survival]; }; jmcm = derive2 { name="jmcm"; version="0.2.1"; sha256="1giyd0agjz1qpgj7q55maxk7jjmpwc3mrj02ailvwl44rdvhl90v"; depends=[Formula lattice Rcpp RcppArmadillo roptim]; }; - jmdem = derive2 { name="jmdem"; version="1.0"; sha256="1qz2l02m4gnxrm1ankr5qqlskl8amphzj8r763yas218fvzfa34q"; depends=[statmod VGAM]; }; + jmdem = derive2 { name="jmdem"; version="1.0.1"; sha256="15zrxgd5fgi4wzp4s963pnwj3vkgxs4ygqrcpncy9b6j2cxrivdc"; depends=[statmod VGAM]; }; jmdl = derive2 { name="jmdl"; version="0.3.0"; sha256="0167yj368lh1n79jwbqs4g2asb67hfmgh97519linmfpx0n6xdpa"; depends=[boot Formula MASS minqa mnormt mvtnorm]; }; jmetrik = derive2 { name="jmetrik"; version="1.1"; sha256="1if1kxx8apgkbxpkjnlj2lpsfnyj2splsg1p3j5vxa7q6wx70f9j"; depends=[]; }; + jmotif = derive2 { name="jmotif"; version="1.1.1"; sha256="0b2qllpfgs6q5fwfhxl5b4xdyzbvnja7ld766akf0xxznxvglkrg"; depends=[Rcpp RcppArmadillo]; }; jmuOutlier = derive2 { name="jmuOutlier"; version="2.2"; sha256="1vj9n1hsf780f7l0a22kmi3qm84j4dzjybjkh5zwh6bhwfjnjws3"; depends=[]; }; - jmv = derive2 { name="jmv"; version="1.0.8"; sha256="0h62kmg7z08a5kz4fyz0l1s1hx6i8p75xm5k2pq80jryd6nk3xkg"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; - jmvconnect = derive2 { name="jmvconnect"; version="1.0.9"; sha256="1x74zwnp3cdwqsv7djnqcv6k0nrf7v7ng6pk79lzninbssm24sr1"; depends=[BH evaluate httr jmvcore rappdirs Rcpp]; }; - jmvcore = derive2 { name="jmvcore"; version="1.0.8"; sha256="11g6cmiw6l3xkppm6xz1k2lm6xl69ll2av9vn755ngbvf09fgywn"; depends=[base64enc R6 rjson rlang stringi]; }; + jmv = derive2 { name="jmv"; version="1.2.5"; sha256="1hqiclddizvfyvylkak8ia990bfncb9f7gcyljgxmra3djn9mhdn"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; + jmvconnect = derive2 { name="jmvconnect"; version="1.2.8"; sha256="0nfd8zxb9pcvn0180vhwccgy5m00lziq0wh0pwxmnazg1x6n0raw"; depends=[BH evaluate httr jmvcore rappdirs Rcpp]; }; + jmvcore = derive2 { name="jmvcore"; version="1.2.5"; sha256="16ki47sm9ng6jqvyyrgw7s09ag4b28dyaqgn5fck1r7ph2l82lp8"; depends=[base64enc R6 rjson rlang stringi]; }; jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; }; joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; - joineR = derive2 { name="joineR"; version="1.2.4"; sha256="05wr7gr3mnsfj8a1m5v1b71gh3fc4pyhj6rqapls7iwrkywbf1b6"; depends=[lattice MASS nlme statmod survival]; }; + joineR = derive2 { name="joineR"; version="1.2.5"; sha256="07rsxqvy62w2z48fkgbhfk5b3q9qwkmz11n8j8qkhipqs0h1zwwq"; depends=[lattice MASS nlme statmod survival]; }; + joineRML = derive2 { name="joineRML"; version="0.4.3"; sha256="0pry2kr53svv2jpzycmm0z9nirxmxxid8p332n6pn5j3bydh7jb4"; depends=[cobs doParallel foreach ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival]; }; joineRmeta = derive2 { name="joineRmeta"; version="0.1.2"; sha256="0lkj3rry8kvdcl3dxrkvnql8rl3fsgc4lk5qdifhl41aws2q7ccs"; depends=[ggplot2 gridExtra gtools JM joineR lme4 MASS Matrix meta msm statmod survival]; }; joinet = derive2 { name="joinet"; version="0.0.3"; sha256="01rql7nidmzhrz6agy5kphsln5nl4lpyrqdrfmf5w98zjr8yqkpr"; depends=[cornet glmnet palasso]; }; joint_Cox = derive2 { name="joint.Cox"; version="3.7"; sha256="1h9cqmly5rrrqvxzkx5fxjaqzks9hpvb2ggaw8b5rn67wbyblrl9"; depends=[survival]; }; @@ -9292,18 +9310,18 @@ in with self; { jpmesh = derive2 { name="jpmesh"; version="1.1.3"; sha256="0ybv19bmrcwzan151p4px0vv6qnaqmk4fgqvqlh4syjnrb6xv0c5"; depends=[leaflet magrittr miniUI purrr rlang sf shiny tibble units]; }; jpndistrict = derive2 { name="jpndistrict"; version="0.3.4"; sha256="1z1rgqibksxrz0048zk78xlsm595jbm3y6xkrqcifm1xnqgh1fys"; depends=[dplyr jpmesh leaflet magrittr miniUI purrr rlang sf shiny tibble tidyr tidyselect]; }; jqr = derive2 { name="jqr"; version="1.1.0"; sha256="00x5a61bsn2ywzc2haz19f6h0sqhlx7z3k1n9y0729dwm4id89ms"; depends=[lazyeval magrittr]; }; - jrc = derive2 { name="jrc"; version="0.3.0"; sha256="1sa6rpmnj48mlwz5h5nfvq4h3yi64bbh5lkxmhs5lc2x03a6nqd6"; depends=[httpuv jsonlite mime R6 stringi stringr]; }; + jrc = derive2 { name="jrc"; version="0.3.1"; sha256="0vzmmzblwx055jvd90bz6s5iy901kqanbrs64c3wpaxvjigwf87z"; depends=[httpuv jsonlite mime R6 stringi stringr]; }; jrich = derive2 { name="jrich"; version="0.60-35"; sha256="1y486bfqmfg3f22wm0lfk3lh20ljgi8qrgn5jji0f417wh48nf0x"; depends=[ape]; }; jrt = derive2 { name="jrt"; version="1.0.1"; sha256="023i0xqz8mhnjnii92vjw64mjnnlf8jaji99i4c2vxcr7m83jm0r"; depends=[directlabels dplyr ggplot2 ggsci irr mirt psych tidyr]; }; jrvFinance = derive2 { name="jrvFinance"; version="1.4.1"; sha256="1gkivmvc0njm32w7yhbh02h9p212xa3m4cvrwcy7yray8g6phdxp"; depends=[]; }; js = derive2 { name="js"; version="1.1"; sha256="1xsdr14k4djcd1nqybvfzhviics4igsj8yz3r0j2nqhin2wjynlf"; depends=[V8]; }; jsTree = derive2 { name="jsTree"; version="1.0.1"; sha256="0n754illyw29bprll676k9qm5vk5h8qss6gb8lls57kdzj51x2jz"; depends=[data_table htmlwidgets jsonlite]; }; jskm = derive2 { name="jskm"; version="0.3.8"; sha256="1z420lx4ayn19k8d13p4ii8r035jingli618mpfjl3wk95hzigqf"; depends=[ggplot2 gridExtra plyr scales survey survival]; }; - jsmodule = derive2 { name="jsmodule"; version="1.0.4"; sha256="1b81k4kgx0bzwdvq777gfj36mhw1832fbb8bijx6np2w46z1xkyg"; depends=[data_table devEMF DT epiDisplay geepack GGally ggplot2 haven Hmisc jskm jstable labelled MatchIt maxstat pROC purrr RColorBrewer readr readxl rstudioapi see shiny shinycustomloader shinyWidgets survC1 survey survIDINRI survival tableone timeROC]; }; + jsmodule = derive2 { name="jsmodule"; version="1.0.6"; sha256="0qf82yrf3jdhwydwcwiqxlznsn5ayiqigdilyp0xqrrx8s8mkb26"; depends=[data_table devEMF DT epiDisplay geepack GGally ggplot2 haven Hmisc jskm jstable labelled MatchIt maxstat pROC purrr RColorBrewer readr readxl rstudioapi see shiny shinycustomloader shinyWidgets survC1 survey survIDINRI survival tableone timeROC]; }; json64 = derive2 { name="json64"; version="0.1.3"; sha256="19q8qgf4wnd3np12ajy180klpjy0g2csw5micwb4sl7qfzl6wc7j"; depends=[jsonlite]; }; - jsonify = derive2 { name="jsonify"; version="1.0.0"; sha256="0cxdbihcl4w43gvskjw420i6dm689jcydp2dzc371152ysdsjjzd"; depends=[BH rapidjsonr Rcpp]; }; + jsonify = derive2 { name="jsonify"; version="1.1.1"; sha256="14zlg99bryxwhdcydpapjykzqml08ld13mj0kkgijgph2jmzm140"; depends=[rapidjsonr Rcpp]; }; jsonld = derive2 { name="jsonld"; version="2.1"; sha256="0lp0lp9nbk31dia2nq6xba29ymak9h5wl4zbq4pdqw6qm9iwz6ww"; depends=[curl jsonlite V8]; }; - jsonlite = derive2 { name="jsonlite"; version="1.6"; sha256="0lyvhnr6n57h3a89bvipii7x17nvfaycm9j5j50bfrlr48jv9ic8"; depends=[]; }; + jsonlite = derive2 { name="jsonlite"; version="1.6.1"; sha256="0xrki07wc17bkmhz0h7jay784j1sls2i9bf1mfpj6yl59791v4kl"; depends=[]; }; jsonstat = derive2 { name="jsonstat"; version="0.0.2"; sha256="0p0d3snl1971p5ikrkmwqrjjh4fy0b89qk3rnd1dayfb0r80xnnj"; depends=[cli dplyr jsonlite rlang]; }; jsonvalidate = derive2 { name="jsonvalidate"; version="1.1.0"; sha256="1vxklvkva547mzbgi7hll46sfx274c6j4m70algygphz783x3dsx"; depends=[V8]; }; jsr223 = derive2 { name="jsr223"; version="0.3.3"; sha256="0i00nbsj6b4mx9pgp5rana1kj57hi4lz3lsiniv7baz5avmhp65n"; depends=[curl jdx R6 rJava]; }; @@ -9314,7 +9332,6 @@ in with self; { jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; }; jubilee = derive2 { name="jubilee"; version="0.3.3"; sha256="1j2y44pfx9z2k169lh42b4dnfrrnk8jqsjn3wz4l9iscr6r91lx7"; depends=[data_table dplyr readxl xts yaml zoo]; }; junctions = derive2 { name="junctions"; version="1.1"; sha256="1v5jx4mw6x4q3fivsvidd49b8czzbvv5icj39h6jrpmqvrnc8w32"; depends=[Rcpp]; }; - junr = derive2 { name="junr"; version="0.1.3"; sha256="0wcglpziyi6z4n7w70srziljba3jkb27iqxbxz4kk6774c7valbf"; depends=[httr jsonlite]; }; justifier = derive2 { name="justifier"; version="0.1.0"; sha256="14795pf94bzcnnaf5w0xqzy06vqvs76gdvr1rn4ihqh2az00l6n7"; depends=[data_tree DiagrammeR purrr ufs yum]; }; jvcoords = derive2 { name="jvcoords"; version="1.0.2"; sha256="1mlamzg0qz5l23v2w08imrlbnzc3b3amr6yz5hbaf8vc3k3cff5f"; depends=[]; }; jvnVaR = derive2 { name="jvnVaR"; version="1.0"; sha256="0zh0dc6wqlrxn5r2yv9vkpyfb8xsbdidkjv9g6qr94fyxlbs4yci"; depends=[]; }; @@ -9323,9 +9340,8 @@ in with self; { kStatistics = derive2 { name="kStatistics"; version="1.0"; sha256="1bfxn38lx5yvz65l9kn29wmqjlv80jar3sra6d89rn58l6rszj6n"; depends=[]; }; kableExtra = derive2 { name="kableExtra"; version="1.1.0"; sha256="1nicvw06xsf3a1f5c10mih07b76m2v5s5h165vmz0qx6n1a3492i"; depends=[digest glue htmltools knitr magrittr readr rmarkdown rstudioapi rvest scales stringr viridisLite webshot xml2]; }; kader = derive2 { name="kader"; version="0.0.8"; sha256="15f2swgngw5rdjdsh5kd55wm2nivlfs8pv4mdn0b75qihwgg1zkk"; depends=[]; }; - kamila = derive2 { name="kamila"; version="0.1.1.3"; sha256="0ssyqn6n1jlslg5kvimakjq9xnb4r8k6ri1a76b13lr11zbl4l10"; depends=[abind gtools KernSmooth plyr Rcpp]; }; - kangar00 = derive2 { name="kangar00"; version="1.3"; sha256="1gxz2lq8vbpjvnriakwipy4fl3mvhrdpnyrnyra3w7zmhlbfp2dd"; depends=[bigmemory biomaRt CompQuadForm data_table igraph lattice sqldf]; }; - kantorovich = derive2 { name="kantorovich"; version="2.0.0"; sha256="0y965nkhgk0z2q2j3sycfg76aqqi3ry8avg0bz9xggpd60bhh5vd"; depends=[gmp lpSolve rcdd Rglpk]; }; + kamila = derive2 { name="kamila"; version="0.1.2"; sha256="01rwalv2qigxl3j3jyhrdbxlarwf0xdc8xa6c42sgcl6qpna5vn7"; depends=[abind gtools KernSmooth plyr Rcpp]; }; + kangar00 = derive2 { name="kangar00"; version="1.4"; sha256="0cgyxvgk6bxvh77y9vl0p024dya9ffr9fhmwlcxbysbr4p3kyiaj"; depends=[bigmemory biomaRt CompQuadForm data_table igraph KEGGgraph lattice sqldf]; }; kaos = derive2 { name="kaos"; version="0.1.2"; sha256="0hzzb8ldydl4g3cl1579q8jv835q4cdmn8agafp6qqdhwi1xxw8k"; depends=[ggplot2 reshape2]; }; kaphom = derive2 { name="kaphom"; version="0.3"; sha256="081drgckirc0wv2viyhhnabrlfzi0nkpq6pffw2rxfjyxdsyvnwa"; depends=[]; }; kappaSize = derive2 { name="kappaSize"; version="1.2"; sha256="0lrcyj85zcl73m6bhbzl6rkprrfpfwmm4amyjkg1xsasy5zlwk67"; depends=[]; }; @@ -9348,22 +9364,22 @@ in with self; { kehra = derive2 { name="kehra"; version="0.1"; sha256="1cc0bmbg0dncay50ap7cs2516qngzz3ddaab0jk5r6lwfq87h8qx"; depends=[Hmisc raster reshape2 sp stringr xts zoo]; }; kelvin = derive2 { name="kelvin"; version="2.0-0"; sha256="04xdgpmysksm79m3vqmb4zra3pq09nv99w4fbdla1lmy7z8pkdrk"; depends=[Bessel]; }; kendallRandomWalks = derive2 { name="kendallRandomWalks"; version="0.9.4"; sha256="1mfqblvsn9p6gdcnbypfpzk0xzn6bz1ajbrkz2dap5w35dia3kxa"; depends=[actuar dplyr ggplot2 tibble]; }; - kequate = derive2 { name="kequate"; version="1.6.2"; sha256="08p2dv5swp5458n9sx262s330cj8iy86vr6d8989mjzfys2jyb4q"; depends=[equateIRT ltm mirt]; }; + kequate = derive2 { name="kequate"; version="1.6.3"; sha256="1ii3wlypm2qqkfxr3z1sdnmgc43h2zzlw6v4h2xxjdlznzxkp3mr"; depends=[equateIRT ltm mirt]; }; keras = derive2 { name="keras"; version="2.2.5.0"; sha256="14a1mhx95446s8smd4s7adzlmpzx18kqsbgzva4gbya1b48bkw3l"; depends=[generics magrittr R6 reticulate tensorflow tfruns zeallot]; }; kerasR = derive2 { name="kerasR"; version="0.6.1"; sha256="1yi7710vgcwz0jhishbga41sc6qyk83a0avmq01dvqjsz3cdfsfc"; depends=[reticulate]; }; kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; }; - kergp = derive2 { name="kergp"; version="0.5.0"; sha256="000hs9mi22k0wyafnj5a3vnhfq9la0s159afnd9133bjx0l6q2g7"; depends=[doFuture doParallel lattice MASS nloptr numDeriv Rcpp testthat]; }; + kergp = derive2 { name="kergp"; version="0.5.1"; sha256="16zb7gsbp3bg4kpn7lszw8rn24i40f6jmxcf751vca1f7pfn38pj"; depends=[doFuture doParallel lattice MASS nloptr numDeriv Rcpp testthat]; }; kernDeepStackNet = derive2 { name="kernDeepStackNet"; version="2.0.2"; sha256="04bdggxvggmppp289n2zw6ijdm7y05gws6z7bp6fr8n1zsxy2w3c"; depends=[caret DiceKriging DiceOptim GA GenSA glmnet globalOptTests lhs matrixStats mvtnorm Rcpp RcppEigen]; }; kerndwd = derive2 { name="kerndwd"; version="2.0.2"; sha256="0nf5hyb274gn02n4lygwryv1jaqff77i040bd8gs1xykgvy6jxny"; depends=[]; }; kernelFactory = derive2 { name="kernelFactory"; version="0.3.0"; sha256="001kw9k3ivd4drd4mwqapkkk3f4jgljiaprhg2630hmll064s89j"; depends=[AUC genalg kernlab randomForest]; }; kernelPSI = derive2 { name="kernelPSI"; version="1.1.1"; sha256="1gnp3ixqmijy6xanlc4l8255biwxmlfyhd3y68arry9rzfjkmxpz"; depends=[CompQuadForm kernlab lmtest pracma Rcpp RcppArmadillo]; }; kernelTDA = derive2 { name="kernelTDA"; version="0.1.1"; sha256="0rghj0yx32r6565mb06k83qfmnf7lajdhdg2zf8kjd9jyzidqdrn"; depends=[BH mvtnorm Rcpp RcppEigen Rdpack]; }; - kernelboot = derive2 { name="kernelboot"; version="0.1.6"; sha256="151jksyd316wdlinzikpik9g4x4qnqyl87sg4lbdnzq6w35c5j38"; depends=[future future_apply Rcpp]; }; + kernelboot = derive2 { name="kernelboot"; version="0.1.7"; sha256="1465n9fasyxwm4xx9vajaf5n355z2qdkfzhpp3a6mkv58pydbjss"; depends=[future future_apply Rcpp]; }; kernhaz = derive2 { name="kernhaz"; version="0.1.0"; sha256="1cxwjnfyhxfjdbhs21airycs704jic21pdpsbxsx37wkl11cxpai"; depends=[doParallel foreach GA rgl]; }; kernlab = derive2 { name="kernlab"; version="0.9-29"; sha256="0vqhndl4zm7pvkfvq0f6i9cbrm7pij6kmdp7d7w39pa100x6knn3"; depends=[]; }; kernplus = derive2 { name="kernplus"; version="0.1.2"; sha256="0z5zpj89nw7cdphg6frmjwqjxsl6g95xsa8zgsxmw2q75wwj1saz"; depends=[circular KernSmooth mixtools]; }; kernscr = derive2 { name="kernscr"; version="1.0.5"; sha256="1kcj710q8jbc34g6fcv2nk07hpsb81mfx8hvivgxq8x58028gjzs"; depends=[MASS mvtnorm]; }; - keyholder = derive2 { name="keyholder"; version="0.1.3"; sha256="0r45wd36bf3ir3j3llcy40w6l8440ncvx3c1f6qvb8zgl4bl6z22"; depends=[dplyr rlang tibble]; }; + keyholder = derive2 { name="keyholder"; version="0.1.4"; sha256="1k648a16015qq29msls2s5y5ql9myi1908klih5gj09pf2fr93wq"; depends=[dplyr rlang tibble]; }; keyplayer = derive2 { name="keyplayer"; version="1.0.3"; sha256="0j4n46r9ivkbzqz8g22dq2bpmx7bs05yb5qp27p9jnfh5x19v2ds"; depends=[igraph matpow sna]; }; keypress = derive2 { name="keypress"; version="1.2.0"; sha256="19l33519f726i3q20y34v1aavrn4fpj3zn5caij3l9q2asw2kqk2"; depends=[]; }; keyring = derive2 { name="keyring"; version="1.1.0"; sha256="1hpfd4hbx43i39l995rg86kfxi7wlyla1gv8mwcdr4xx7z122zzq"; depends=[assertthat filelock getPass openssl R6 rappdirs sodium yaml]; }; @@ -9373,11 +9389,11 @@ in with self; { kgc = derive2 { name="kgc"; version="1.0.0.2"; sha256="14zbcimnglh5jj07dcaxp1dfjaz8syswy29nf8z39qmslv1hg9kk"; depends=[plyr shiny shinythemes]; }; kgschart = derive2 { name="kgschart"; version="1.3.5"; sha256="1gdsrmnv8z99cldvig7grlq8gsbv3wpx7zdamw85lz563n4ln94d"; depends=[abind deepnet ggplot2 gridExtra magrittr matrixStats nnet png shiny stringr]; }; khroma = derive2 { name="khroma"; version="1.3.0"; sha256="1bpap5ljnsjwj0d6r90zhxvgs87j6v2pwxxd6ny14jzn402f1zp8"; depends=[]; }; - kidney_epi = derive2 { name="kidney.epi"; version="1.1.0"; sha256="191yrqdviwvfl62c62qqfa154hglxpfwcxllhgwlm8nsysg46z5i"; depends=[]; }; + kidney_epi = derive2 { name="kidney.epi"; version="1.2.0"; sha256="1hd6w7kxim5slmmqalf5sfjg8jcvhyzn5g4gf6h0lmaprsfszhja"; depends=[]; }; kimisc = derive2 { name="kimisc"; version="0.4"; sha256="0nbjspbq9akhmamfdn192p5b6ki7xqhp422ih6v77xsnrhl5m24z"; depends=[memoise plyr pryr]; }; kin_cohort = derive2 { name="kin.cohort"; version="0.7"; sha256="0wijsjz0piz5j9rm2nr3d5dfpiyba740mbfbkmfll9pz72s58wz8"; depends=[survival]; }; kineticF = derive2 { name="kineticF"; version="1.0"; sha256="1k54zikgva9fw9c4vhkc9b0kv8sq5pmc962s8wxr6qv97liv9p46"; depends=[circular lqmm MASS plotrix sp splancs]; }; - kinship2 = derive2 { name="kinship2"; version="1.8.4"; sha256="18qljqzdv2pc8i3lp6y68ifsqkh3j7gd2bq773myadarapnm7n1k"; depends=[Matrix quadprog]; }; + kinship2 = derive2 { name="kinship2"; version="1.8.5"; sha256="1mhnb805l1q5n4nf1gqb0jw8nbpg1yc0l1c61k3zr7mdrjv2dhkj"; depends=[Matrix quadprog]; }; kirby21_base = derive2 { name="kirby21.base"; version="1.7.0"; sha256="0drm9h1f91yb75v9jzcaysj2cijcana949xvq8bgkqklmf9zwfl5"; depends=[git2r]; }; kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.7.0"; sha256="1z2l6bn53mwkll9ki4169lqlz6wcfp29xzdrqyw606j2xrs4wc22"; depends=[kirby21_base]; }; kirby21_t1 = derive2 { name="kirby21.t1"; version="1.7.0"; sha256="0bv8rrk9jh02h3gill1g2w246j4zv98cjchz7i2c092lvqps8szs"; depends=[kirby21_base]; }; @@ -9385,12 +9401,12 @@ in with self; { kitagawa = derive2 { name="kitagawa"; version="2.2-2"; sha256="0hl2l42jz4wkcx94cqycw8zb3ffg72fp2f310sh5icrcnyw43bmp"; depends=[kelvin]; }; kiwisR = derive2 { name="kiwisR"; version="0.1.8"; sha256="0nncb1xvic0gmj4gllsk1lgwsizlq3vsnifjcf4dp716iik0h0sr"; depends=[dplyr httr jsonlite lubridate purrr tibble]; }; kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; }; - klaR = derive2 { name="klaR"; version="0.6-14"; sha256="1g995df6286sd64nw7q9bihzkqhrasks45n8xk678y57kcadksai"; depends=[combinat MASS questionr]; }; + klaR = derive2 { name="klaR"; version="0.6-15"; sha256="1bhgkq6spjawy5lsh663rnby4fzrx4k2qwqp4ci4p9pq8g35pzjv"; depends=[combinat MASS questionr]; }; klassR = derive2 { name="klassR"; version="0.1.2"; sha256="1wfgqy4pfbaikm0qqf6dirjw0imbl6si9i0nwn8l17i7c8g8g55s"; depends=[httr jsonlite tm]; }; klausuR = derive2 { name="klausuR"; version="0.12-10"; sha256="12fjs4dnwaki8sz718xgsg8qrqhsgf87cs0bylf0p3f5k8hrmk4b"; depends=[polycor psychometric xtable]; }; klustR = derive2 { name="klustR"; version="0.1.0"; sha256="1g2q6h3cbm8v3gqz0f6v8bl5na9972k38d94czjfxmx4cv7wfgx8"; depends=[htmlwidgets jsonlite]; }; km_ci = derive2 { name="km.ci"; version="0.5-2"; sha256="1l6kw8jppaa1802yc5pbfwwgac56nhwc9p076ivylhms4w7cdf8v"; depends=[survival]; }; - kmc = derive2 { name="kmc"; version="0.2-3"; sha256="0r1zm8r51zijv67d0dri7mg5z5ihy7h1n16kpf7ap9ravkc8zbik"; depends=[emplik Rcpp rootSolve]; }; + kmc = derive2 { name="kmc"; version="0.2-4"; sha256="0y8bdgdxsz53fiqc2yr39agndxs4zxj7mmplj273map9k0slnnqk"; depends=[emplik Rcpp rootSolve]; }; kmconfband = derive2 { name="kmconfband"; version="0.1"; sha256="10n5w8k57faqcclwshs4m66i2i5b70i6f3xq5nqlgsi2ldkysbc9"; depends=[survival]; }; kmcudaR = derive2 { name="kmcudaR"; version="1.1.0"; sha256="16dkv9ag5375zc23nqakbg7v6knxvh1pips9rjsls0d7rw2bg1bs"; depends=[Rcpp RcppEigen]; }; kmeRs = derive2 { name="kmeRs"; version="1.1.0"; sha256="1wafa9wgqlwrk6jwmbn34n3rmvbc9s6s235z8mscbqgw67snwcq6"; depends=[Biostrings rDNAse tcR]; }; @@ -9404,13 +9420,12 @@ in with self; { kmodR = derive2 { name="kmodR"; version="0.1.0"; sha256="1y1pqrrralklflyb1dw8bslfcyqrw8ryijfbhkwba7ykpxcf9fda"; depends=[]; }; knitLatex = derive2 { name="knitLatex"; version="0.9.0"; sha256="1igacc2sx8897wmnhh8kngd0fq6zqbi30chy5c8jw60zc38mi3wi"; depends=[knitr]; }; knitcitations = derive2 { name="knitcitations"; version="1.0.10"; sha256="0d73qr1zhkx0255vzzf7fs8vpmfnzl91ni4zp5y0l42h8p98vdn5"; depends=[digest httr RefManageR]; }; - knitr = derive2 { name="knitr"; version="1.27"; sha256="02nysgnx6xv0kd351s1d59yx4g0drsd9lmcgxs0rsw5f1jiycgdg"; depends=[evaluate highr markdown stringr xfun yaml]; }; + knitr = derive2 { name="knitr"; version="1.28"; sha256="0ai382fmpz25qrhdgchs3vph2cdvyd73xyryg4jby5fp67d03vh5"; depends=[evaluate highr markdown stringr xfun yaml]; }; knitrBootstrap = derive2 { name="knitrBootstrap"; version="1.0.2"; sha256="1aj60j7f0gcs120fdrnfbnb7vk7lfn1phil0mghg6a5zldz4cqs3"; depends=[knitr markdown rmarkdown]; }; knitrProgressBar = derive2 { name="knitrProgressBar"; version="1.1.0"; sha256="18v5jrscfrin3mcs63bpj0q1drxk3zkhlbw93sqh0qrq04d4x02v"; depends=[R_oo R6]; }; knn_covertree = derive2 { name="knn.covertree"; version="1.0"; sha256="0msfcmwydws7q7m5jdb0dxab0nkbl7mq5llg6v3r4qrnlvrdggvz"; depends=[Matrix Rcpp RcppEigen]; }; knnGarden = derive2 { name="knnGarden"; version="1.0.1"; sha256="1gmhgr42l6pvc6pzlq5khrlh080795b0v1l5xf956g2ckgk5r8m1"; depends=[cluster]; }; knnIndep = derive2 { name="knnIndep"; version="2.0"; sha256="1fwkldgs2994svf3sj90pwsfx6r22cwwa22b30hdmd24l8v9kzn7"; depends=[]; }; - knncat = derive2 { name="knncat"; version="1.2.2"; sha256="1d392910y3yy46j8my1a7m0xkij2rc6vwq5fg22qk00vqli8drz2"; depends=[]; }; knnp = derive2 { name="knnp"; version="2.0.0"; sha256="0qgq8la3zndlb1wwqv9b2kw52y9ns36pi4ds68pkm81bhzq5nqis"; depends=[doParallel foreach forecast parallelDist plyr]; }; knockoff = derive2 { name="knockoff"; version="0.3.2"; sha256="1ky69f3hwwgy2il097mx0z7aakxsq692g9ink8z8cb4wnrp4bk07"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; knor = derive2 { name="knor"; version="0.0-7"; sha256="1xxv210sjj9w06pf36q7haz9fkqdc17jyqdsiqsxj3q8zj585qfc"; depends=[Rcpp]; }; @@ -9424,17 +9439,17 @@ in with self; { kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.2"; sha256="1nwydfyr9waa5h8h8nrmwxy0jx7i4893g5khfv6b4g09z6g5cyly"; depends=[curl dplyr glue httr purrr rlang sf shiny stringr tibble xml2]; }; kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; }; komaletter = derive2 { name="komaletter"; version="0.3.2"; sha256="0gw86j9fvklz2x9hcl4h3kxjjki5fagmh2dskkpvabmgpk3725z1"; depends=[rmarkdown]; }; - konfound = derive2 { name="konfound"; version="0.1.2"; sha256="1sza54hvg16jxrl37zmsrqvdlxjqhyd0kaxpb9fqd7rkbjqdp0m2"; depends=[broom dplyr ggplot2 margins pbkrtest purrr rlang tidyr]; }; + konfound = derive2 { name="konfound"; version="0.2.1"; sha256="16c7wqifcsr4rmx6gi1n1lhmmn183gmgmqnvy9lc71vz6b8w31xq"; depends=[broom crayon dplyr ggplot2 mice purrr rlang tidyr]; }; kosel = derive2 { name="kosel"; version="0.0.1"; sha256="1gdsy4i58byqxddpsm5nk1r3hlgik5gs2b8jqcm8n1r4ib6pg0ay"; depends=[glmnet ordinalNet]; }; kpcalg = derive2 { name="kpcalg"; version="1.0.1"; sha256="1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52"; depends=[energy graph kernlab mgcv pcalg RSpectra]; }; - kpeaks = derive2 { name="kpeaks"; version="0.1.0"; sha256="1qxpncwyshv35h1190py6a69mljabfcjjs7v17a2rb5asahy3rk8"; depends=[]; }; + kpeaks = derive2 { name="kpeaks"; version="1.1.0"; sha256="057xfqn08lqczgrj1r63d7vbncg24x9va9lnk8c47nwzl1x8aphd"; depends=[]; }; kpmt = derive2 { name="kpmt"; version="0.1.0"; sha256="15d26khc0v3kc1c7l1avqp48pfqmc6xj32029mv7myivr41ashk3"; depends=[matrixStats]; }; kpodclustr = derive2 { name="kpodclustr"; version="1.0"; sha256="1fywgdj4q3kg8y9lwnj6vxg9cwgs5ccwj6m3knfgg92f8ghnsbsw"; depends=[clues]; }; kriens = derive2 { name="kriens"; version="0.1"; sha256="1qi65k9fsbbkbw0w40rv60p5ygrvr10rmlyxdaqa5bdpcmrbly5z"; depends=[]; }; - krige = derive2 { name="krige"; version="0.3-1"; sha256="1dxn9prl79ln0m5dlwh62m553lrah1w1kwix02xafhiawl4rxp40"; depends=[MASS mvtnorm]; }; + krige = derive2 { name="krige"; version="0.4.1"; sha256="1mpg1zqabgpi4f4dfnmlpdhs8hnc560sdpp41k4whjnbhqg9flxd"; depends=[invgamma MASS mvtnorm]; }; kriging = derive2 { name="kriging"; version="1.1"; sha256="04bxr34grf2nlrwvgrlh84pz7yi0r8y7dc2wk0v5h5z6yf5a085w"; depends=[]; }; krm = derive2 { name="krm"; version="2019.12-11"; sha256="1dzgvj30bjq4af0470hyxad6bf1y676wk789gqf8rgfwywkk8rr6"; depends=[kyotil]; }; - ks = derive2 { name="ks"; version="1.11.6"; sha256="0hcccjfqnzdxkmnfzq8c5a7yhc138azwyl7rp29d1vl1jawwrwfq"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm]; }; + ks = derive2 { name="ks"; version="1.11.7"; sha256="1f6jvxy0hmngyvnvrknzbmhl42njk0vqyycvydm4qnp8cqirqvba"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm]; }; ksNN = derive2 { name="ksNN"; version="0.1.2"; sha256="06x471hck95xqy7rbh53ibhzh6kfjra7y9ipqdj2rqdkmfdj72q8"; depends=[Rcpp]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; ksharp = derive2 { name="ksharp"; version="0.1.0.1"; sha256="1dnkj838y8c1b53mlljhjqs3nd864i9xcqsv9n4fw28b4br9m570"; depends=[]; }; @@ -9452,28 +9467,28 @@ in with self; { kvh = derive2 { name="kvh"; version="1.4.1"; sha256="0hnqlybphx8qnx98ynykxpz4ys4prp9zbmkak02qlvmnxwc2cqg0"; depends=[Rcpp]; }; kwb_hantush = derive2 { name="kwb.hantush"; version="0.3.0"; sha256="1rlm7i95yw66asgkag93phig2y9lic4xl2fv3cbnr3v751f6a59m"; depends=[hydroGOF lattice]; }; kyotil = derive2 { name="kyotil"; version="2019.11-22"; sha256="13ihijshgzi3lg07p24yzyxjsrfy9nsf6r5vcssz19y9w26scaj2"; depends=[]; }; - kza = derive2 { name="kza"; version="4.1.0"; sha256="128r4xmqxy1i1svcmv8786qqmriyqygd8d49cp53x8gb56k011xa"; depends=[]; }; + kza = derive2 { name="kza"; version="4.1.0.1"; sha256="1vx7wc8iwmr9d6ff2kcy6y3nyfj6jfzv4hxkv1fsas0rbjgfick4"; depends=[]; }; kzfs = derive2 { name="kzfs"; version="1.5.0.2"; sha256="0x0fc807p0pwsjkhjq51ymwr9nhs6cb0m82029cz8bbn3yf6cymq"; depends=[digest kzft]; }; kzft = derive2 { name="kzft"; version="0.17"; sha256="1y6almhs1x21cr4bbf5fj3mnhp65ivzs869660cyg70sva853sv7"; depends=[polynom]; }; kzs = derive2 { name="kzs"; version="1.4"; sha256="1srffwfg0ps8zx0c6hs2rc2y2p01qjl5g1ypqsbhq88vkcppx1w9"; depends=[lattice]; }; - l0ara = derive2 { name="l0ara"; version="0.1.5"; sha256="15qajzpvqnikg9k199cqvwp9qbrxx4zr9lsvyad96pa9qr156gvb"; depends=[Rcpp RcppArmadillo]; }; + l0ara = derive2 { name="l0ara"; version="0.1.6"; sha256="1cv48rbq080z7zx32hmlkpq7mi5axr09a1hyv3knl1vb9gql4qjq"; depends=[Rcpp RcppArmadillo]; }; l1kdeconv = derive2 { name="l1kdeconv"; version="1.2.0"; sha256="1mk92sz9nsmxsn7yplhfcz07k022lrr61114ckrmm0x8hfd89zj8"; depends=[ggplot2 mixtools]; }; l2boost = derive2 { name="l2boost"; version="1.0.1"; sha256="0f2gapzpvjnr8n1jgn60jpmcas4s8nk2q8q4k5v4ypwvpfqp7kk1"; depends=[MASS]; }; laGP = derive2 { name="laGP"; version="1.5-5"; sha256="1a269cy9qmjldb5hv1nl9naq1rr35z37xjpp4kannj6p560fm476"; depends=[tgp]; }; labdsv = derive2 { name="labdsv"; version="2.0-1"; sha256="099rzl9hy70rmb5fg0vx26mlhr4ra2s0hl3jgv22s8hqpvlmakas"; depends=[cluster MASS mgcv Rtsne]; }; label_switching = derive2 { name="label.switching"; version="1.8"; sha256="0xwwhn249aibip12yxjwlrpyqj6zvc95zc7n9jf2vjjpashyc3yk"; depends=[combinat lpSolve]; }; - labelVector = derive2 { name="labelVector"; version="0.1.0"; sha256="08ydgmvks09hbln10zmqxv9hxgiha0n9w5cgych9bnkqdca74gah"; depends=[]; }; + labelVector = derive2 { name="labelVector"; version="0.1.1"; sha256="156066jbsmqal1q4xwwkyrqfzq0as6r2add0x240y21zak6i8x9q"; depends=[]; }; labeledLoop = derive2 { name="labeledLoop"; version="0.1"; sha256="0gq392h0sab8k7k8bzx6m7z5xpdsflldhwbpdf92zbmkbzxsz00m"; depends=[]; }; labeling = derive2 { name="labeling"; version="0.3"; sha256="13sk7zrrrzry6ky1bp8mmnzcl9jhvkig8j4id9nny7z993mnk00d"; depends=[]; }; - labelled = derive2 { name="labelled"; version="2.2.1"; sha256="1mrpsayrar5m3w2s7ck3m5x62bcns1jhyc6jw12b3bdca251v1ai"; depends=[dplyr haven]; }; + labelled = derive2 { name="labelled"; version="2.2.2"; sha256="1hs83kb0z9ri7q1lpxczf65prf2kgpp7ljb7d5dx9bffqdy1j5h6"; depends=[dplyr haven]; }; labelmachine = derive2 { name="labelmachine"; version="1.0.0"; sha256="18l7argmf7d60cv34w7acjg4bk08nhi2cc5p61sx2zmq28v8nndr"; depends=[yaml]; }; labelrank = derive2 { name="labelrank"; version="0.1"; sha256="03pmpkjdhgw80473kdzdz4s4828pa8f5bja2zqicxrhvyvicvz6f"; depends=[pdist]; }; labstatR = derive2 { name="labstatR"; version="1.0.9"; sha256="1ysk23dwan1lsfwnf9v86yqyzc8wsgzmy18ycz34s4d9biq6y1zd"; depends=[]; }; labstats = derive2 { name="labstats"; version="1.0.1"; sha256="1780slp9l1rqwr5ika6hv606jzbaa3g1ywzkjkd3ff2gb0cby3ni"; depends=[]; }; - lacm = derive2 { name="lacm"; version="0.0.3"; sha256="0qhvffiw2bcpnv6l4y4h12ss59yc2j0hwsg2nr4a7w4nh6yk9fwc"; depends=[numDeriv statmod]; }; + lacm = derive2 { name="lacm"; version="0.1.0"; sha256="0nlk9fzpbz55zzjizlwnsgfj9ik4zfq1s7b68yw1nndaq47lpljy"; depends=[numDeriv statmod]; }; lactcurves = derive2 { name="lactcurves"; version="1.0.0"; sha256="06dj8ajg6ndnyakywy16wbqjjr2jkidvnjv33vxcacwijympaqqy"; depends=[orthopolynom]; }; - lacunaritycovariance = derive2 { name="lacunaritycovariance"; version="1.0-8"; sha256="1dya5jbrr76p20k37v07g8wck8vrdr2j3r04pqhmwq6i7h0w2c30"; depends=[RcppRoll spatstat]; }; - laeken = derive2 { name="laeken"; version="0.5.0"; sha256="1g9r3y7b0gl91hijk9awa8rjk97mqpkxinzq2cgmx0m38ng9ylpa"; depends=[boot MASS]; }; + lacunaritycovariance = derive2 { name="lacunaritycovariance"; version="1.0-13"; sha256="041vldak0s24hci4fm2k1vwm5nvv1nxld94psiaz1v1fh4k781jm"; depends=[RcppRoll spatstat]; }; + laeken = derive2 { name="laeken"; version="0.5.1"; sha256="199rjkhjjygpr6cjzab87as46acb5npi44m4yycvk7lnd0blma8s"; depends=[boot MASS]; }; laercio = derive2 { name="laercio"; version="1.0-1"; sha256="0la6fxv5k9zq4pyn8dxjiayx3vs9ksm9c6qg4mnyr9vs12z53imm"; depends=[]; }; lagged = derive2 { name="lagged"; version="0.3-0"; sha256="0bm3d6pgb25rw1njarki60j4d7mx7rni25a21iw1l650slg7sscm"; depends=[]; }; lagsarlmtree = derive2 { name="lagsarlmtree"; version="1.0-1"; sha256="1v3a580scxb1v5na3ab3ax9qlzbnay7nhm3ln5l8f9zgsqrg5lyh"; depends=[Formula partykit spatialreg]; }; @@ -9488,12 +9503,13 @@ in with self; { landsat = derive2 { name="landsat"; version="1.1.0"; sha256="15ymmwhkgw0lqyy2sryss3nsmkrjf4cc0bzlsr41vh5c2636srfd"; depends=[lmodel2 mgcv rgdal sp]; }; landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; }; landscapeR = derive2 { name="landscapeR"; version="1.2"; sha256="1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy"; depends=[raster Rcpp]; }; - landscapemetrics = derive2 { name="landscapemetrics"; version="1.4.2"; sha256="04hv1v4nzvsnvhl1sdsvi4ga6kajj5qipyxyqw4y9ps3h1iw1c41"; depends=[cli ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; + landscapemetrics = derive2 { name="landscapemetrics"; version="1.4.3"; sha256="1yy9n4dg8q9r7h34rc40idqmvrgnd06fj95jcs6fwfdqnq78mc2j"; depends=[cli ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; landscapetools = derive2 { name="landscapetools"; version="0.5.0"; sha256="11zp6r414nkj8vhsbryzhkxmpal2bva8msaxf1v69xax70ilxyf1"; depends=[ggplot2 raster Rcpp tibble]; }; landsepi = derive2 { name="landsepi"; version="0.0.8"; sha256="0k2hkrj0r3hx5jvmgx852s030md3cqhm7yixl0xxlkxwqrylw7qc"; depends=[fields maptools MASS Matrix Rcpp rgdal rgeos sf sp splancs]; }; languageR = derive2 { name="languageR"; version="1.5.0"; sha256="1iipnr2b4hd2w718prbh075j56m5xnchlcb2vg26m16qpydp6afn"; depends=[]; }; languagelayeR = derive2 { name="languagelayeR"; version="1.2.4"; sha256="1q82shdcdd84nr6bnfwgyyb81z8dycvj1i3vhwvdg710s15rgiyk"; depends=[attempt curl httr jsonlite]; }; - languageserver = derive2 { name="languageserver"; version="0.3.3"; sha256="16x5a63x49xzgh32sqxfriabax45ng01vmr5i1srp30am55sxa18"; depends=[callr collections desc jsonlite lintr R6 readr repr stringr styler xml2 xmlparsedata]; }; + languageserver = derive2 { name="languageserver"; version="0.3.4"; sha256="1l9vwlc19kj4zavhxsh04iidndjh28fj8qc1dm6187hb755dfjpw"; depends=[callr collections desc fs jsonlite lintr R6 readr repr stringr styler xml2 xmlparsedata]; }; + languageserversetup = derive2 { name="languageserversetup"; version="0.1.1"; sha256="07vwfgdw79zcr8wlmzs4b5mqmd7fa2ja76vpyjvlf07ifg7x82jw"; depends=[]; }; lans2r = derive2 { name="lans2r"; version="1.0.5"; sha256="1m3hz85gl9m4vafdy7mj3z560d11mdwlwvnzy8n7d1cjqryn7a2b"; depends=[dplyr ggplot2 lazyeval R_matlab reshape2 tidyr]; }; lar = derive2 { name="lar"; version="0.1-2"; sha256="0qda0y4ag10kg83wxs3z754kc8c1dg2rwciy64klk7an4ln43i5b"; depends=[data_table treemap xlsx]; }; largeList = derive2 { name="largeList"; version="0.3.1"; sha256="0csijzlxajj0rh24w5n7fs6ss301zr6zfv5khyq4a9g437bwhc2i"; depends=[]; }; @@ -9509,12 +9525,11 @@ in with self; { latex2exp = derive2 { name="latex2exp"; version="0.4.0"; sha256="12nbcgfmv13k6sc6m326ras9bcvy380b7rxcxphn06r3cfkby0zw"; depends=[magrittr stringr]; }; latexpdf = derive2 { name="latexpdf"; version="0.1.6"; sha256="07g33z5lyxinlrzpk6pd41m4c4bbfql611yqcqxasf8wra9bb0jr"; depends=[]; }; latte = derive2 { name="latte"; version="0.2.1"; sha256="1dcwxxj3yran5a3a8vvdfmx4ap69ql2jncxvmci4p4vcw4ki9j9g"; depends=[dplyr ggplot2 glue magrittr memoise mpoly stringr usethis]; }; - lattice = derive2 { name="lattice"; version="0.20-38"; sha256="0b8abkz7syscq883mrgv63pkwaqkcpwfx8rgbqy9vgfva0z5xszx"; depends=[]; }; - latticeDensity = derive2 { name="latticeDensity"; version="1.1.0"; sha256="0amxkdf240pgqaydkfvmv1mgsl17jv57938sl96clw1bzd4ilnld"; depends=[sp spam spatstat spdep splancs]; }; + lattice = derive2 { name="lattice"; version="0.20-40"; sha256="1w53sfzdy9zsifv44dqf9pl46fk14lnx3fha1k1p660h51lyv56m"; depends=[]; }; latticeExtra = derive2 { name="latticeExtra"; version="0.6-29"; sha256="04fzwcqs594rk5qp98yilh3kdh3sw4xf8wld5rp94ggpaqfw7bbc"; depends=[jpeg lattice png RColorBrewer]; }; - lava = derive2 { name="lava"; version="1.6.6"; sha256="0nfab5fgnmxh8cplg8rd8cp34fny5j0k5wn4baj51r6ck7fq9g3s"; depends=[numDeriv SQUAREM survival]; }; + lava = derive2 { name="lava"; version="1.6.7"; sha256="0ffzxbb8pvfh1m6j61az4ga37snyhylq2941fyc76w7w9i2sixv3"; depends=[numDeriv SQUAREM survival]; }; lava_tobit = derive2 { name="lava.tobit"; version="0.5"; sha256="15dlcjgnvrpdxymcwf4rvk72ssr650dy1ayp50zlrp2va0p6h4kw"; depends=[lava mets mvtnorm survival]; }; - lavaSearch2 = derive2 { name="lavaSearch2"; version="1.5.4"; sha256="0zq5i568pd0xwjbxwi0ndhmjxglyd9y2x8yfvnrmg3pq1wxqys6h"; depends=[doParallel ggplot2 lava MASS Matrix multcomp mvtnorm nlme Rcpp RcppArmadillo reshape2 sandwich]; }; + lavaSearch2 = derive2 { name="lavaSearch2"; version="1.5.5"; sha256="1rb330dzmknrgy2fzbgr76js1izd635sj3jxb7bmm4rfg2z09r6n"; depends=[doParallel ggplot2 lava MASS Matrix multcomp mvtnorm nlme Rcpp RcppArmadillo reshape2 sandwich]; }; lavaan = derive2 { name="lavaan"; version="0.6-5"; sha256="04kvsh2m6mnzlhv83phr3hjzy4sx1ck6f7dgsm7xb8cs84dnxszy"; depends=[MASS mnormt numDeriv pbivnorm]; }; lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.2"; sha256="0qgswdpxb5af0l3v70sg0jrgsdwr88gz6zzwbk3pw5x6qnvnwb6r"; depends=[lavaan psych semPlot shiny shinyAce]; }; lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3.1"; sha256="133hpy8s00y6jzwwzl9brdh70w26jycdm3n1c6bcryghwh3ai4xr"; depends=[lavaan MASS survey]; }; @@ -9533,23 +9548,24 @@ in with self; { lba = derive2 { name="lba"; version="2.4.4"; sha256="0izqndm992zv3sg8v5lpnxbdbxhpxl6hq3bf6xgq3pnw8vl3f6nb"; depends=[alabama MASS plotrix rgl scatterplot3d]; }; lbfgs = derive2 { name="lbfgs"; version="1.2.1"; sha256="0p99g4f3f63vhsw0s1m0y241is9lfqma86p26pvja1szlapz3jf5"; depends=[Rcpp]; }; lbfgsb3 = derive2 { name="lbfgsb3"; version="2015-2.13.1"; sha256="15g465dy4izybmgmbgzmiyaxdfa6l1mcvyh6rc3hgapnlmnvb66m"; depends=[numDeriv]; }; - lbfgsb3c = derive2 { name="lbfgsb3c"; version="2019-11.26"; sha256="1wp4vhagh1pvvg6v7gayj7ljicipaa3jz4wbnml4fnzpwzp0irgv"; depends=[numDeriv Rcpp RcppArmadillo]; }; + lbfgsb3c = derive2 { name="lbfgsb3c"; version="2020-3.2"; sha256="07mhiaxhjjma5c65z3pz7wchgsqn4b19labzyq25ncnmj319fxrg"; depends=[numDeriv Rcpp RcppArmadillo]; }; lbiassurv = derive2 { name="lbiassurv"; version="1.1"; sha256="1i6l3y4rasqpqka7j39qjx22wjbilgc9pkp05an52aysfvfxy193"; depends=[actuar]; }; lbreg = derive2 { name="lbreg"; version="1.3"; sha256="1z9vixf6sl0k9lizngc3859lk32srkk1d8y133sl6s37ppmqb4s2"; depends=[MASS]; }; - lcc = derive2 { name="lcc"; version="1.0.3"; sha256="0jvih9j6r8q26m3rjzng6sn2l41n5hgfsg2w298ac1v6asv3a1kn"; depends=[gdata ggplot2 gridExtra hnp nlme]; }; + lcars = derive2 { name="lcars"; version="0.3.1"; sha256="14h6p4cbvx586zmaw480cy8gnjc6w7081dps9imvmf5lwcag66mb"; depends=[ggplot2 shiny trekcolors]; }; + lcc = derive2 { name="lcc"; version="1.0.4"; sha256="1g4j4m21jpxphw264kdnxnqnqlp29asc5h5qziqcbxdgmly087ns"; depends=[gdata ggplot2 gridExtra hnp nlme]; }; lcda = derive2 { name="lcda"; version="0.3"; sha256="1ximsyn6qw2gfn7b1hdpbjs6h6nk7hrignlii0np1lbf0k8l4xxl"; depends=[poLCA]; }; + lchemix = derive2 { name="lchemix"; version="0.1.0"; sha256="1g2w57fi6kvsyir14hnxh0v6xwjdnbisafvjxvn1g6a4h55dg9i0"; depends=[MCMCpack mvtnorm]; }; lclGWAS = derive2 { name="lclGWAS"; version="1.0.3"; sha256="03b6ijqvyirv96hc3dsqf4f0zzqlmq5451mcb14d2mw3s6xy1vmq"; depends=[BH Rcpp]; }; lcmm = derive2 { name="lcmm"; version="1.8.1"; sha256="1n7g4m8r8n2zi53ah35gn0nx666fh6brbysgbsyb2yv4hjrf5v08"; depends=[survival]; }; lconnect = derive2 { name="lconnect"; version="0.1.0"; sha256="0wk1kx0awj6d9w4sn0csws0sksx9cb4b4l9xpjqnyavc4zfhxj8l"; depends=[igraph sf]; }; lcopula = derive2 { name="lcopula"; version="1.0.4"; sha256="11rjymm4zj3brifzrrfwqv9v8rzkzqk072xlzyjxm2p08dd11xxb"; depends=[copula pcaPP Rcpp]; }; lcpm = derive2 { name="lcpm"; version="0.1.1"; sha256="0pqmizli5rhyaxvxrjycf8d5kqrm23i3vdz00r8zmijjpiz2p9s2"; depends=[Matrix numDeriv plyr]; }; - lctools = derive2 { name="lctools"; version="0.2-7"; sha256="1pllm5jf9mpy4nf4bn4vifhr173kddabzybjwq4rg9cni92zm3dn"; depends=[MASS pscl reshape weights]; }; - lcyanalysis = derive2 { name="lcyanalysis"; version="1.0.3"; sha256="0nkqrm8r5iyvw2gbixvi0bnqx2wafg67cqz9mn99halzk9hpynl9"; depends=[quantmod TTR xts zoo]; }; + lcyanalysis = derive2 { name="lcyanalysis"; version="1.0.4"; sha256="0pwr6r8nbvmppqwd9gxap6v49l7iaq5syaq11spxp5yc2h3pa2rg"; depends=[quantmod TTR xts zoo]; }; lda = derive2 { name="lda"; version="1.4.2"; sha256="03r4h5kgr8mfy44p66mfj5bp4k00g8zh4a1mhn46jw14pkhs21jn"; depends=[]; }; lda_svi = derive2 { name="lda.svi"; version="0.1.0"; sha256="1x72zqks8163qpmld21n5vn5q3jazp6g54arf53038rd0c59191q"; depends=[BH Rcpp RcppArmadillo Rdpack reshape2 tm]; }; ldaPrototype = derive2 { name="ldaPrototype"; version="0.1.1"; sha256="0r78x7sn6mg4hgwydk1lgvfzkmgwkzqq0kvn8pqawx9pg8d8h4jb"; depends=[checkmate colorspace data_table dendextend fs lda progress]; }; ldamatch = derive2 { name="ldamatch"; version="1.0.1"; sha256="1dmmjw7h0rrgwga7235bryzzvmx68gmkpy5v1pwvnkk4rxp8xamh"; depends=[car data_table entropy foreach gmp iterators iterpc kSamples MASS RUnit]; }; - ldat = derive2 { name="ldat"; version="0.3.0"; sha256="1bmj5pwkj89mkha74lash4j24b7mj1c7q9as3c4pi5pk4m2s7xwl"; depends=[BH lvec Rcpp]; }; + ldat = derive2 { name="ldat"; version="0.3.3"; sha256="1n8v4nzfv3ayr46ahrz60vasam8mx1phb4vss05d9xh7sxlkx7gv"; depends=[BH lvec Rcpp]; }; ldatuning = derive2 { name="ldatuning"; version="1.0.0"; sha256="021k91a76yxjpda2850jcnxvawlrisvw35rw2p6ylfwkylaf4sz9"; depends=[ggplot2 reshape2 Rmpfr scales slam topicmodels]; }; ldbod = derive2 { name="ldbod"; version="0.1.2"; sha256="1ylzkswnhf4jnjx2ijasy49pj78ffx333za0bx2fnf3g85kicqiv"; depends=[mnormt RANN]; }; ldbounds = derive2 { name="ldbounds"; version="1.1-1.1"; sha256="10rmkidvvhwnrkc62c5ld44xhbvx1k8mch28h1yryakn8gznp3p8"; depends=[lattice]; }; @@ -9578,20 +9594,19 @@ in with self; { learNN = derive2 { name="learNN"; version="0.2.0"; sha256="0q0j25vi7hrwaf38y10m24czf3rsvj937jvkz3ns12bd8srlflah"; depends=[]; }; learnPopGen = derive2 { name="learnPopGen"; version="1.0.4"; sha256="04wxina3n2bspxdp3d4bgqrwyxqxx46pfp8zgzr3rsj89ml8if9l"; depends=[gtools phytools]; }; learningr = derive2 { name="learningr"; version="0.29.1"; sha256="0z3rs7y9yd81f14sbk3dwq1ifr4vca2s3kl1gnkqlns3dycgyp08"; depends=[plyr]; }; - learnr = derive2 { name="learnr"; version="0.10.0"; sha256="0278q9nbkc4nb0rp930kjrwyidf0v7y38d1s187m4f4bs7ha82k6"; depends=[checkmate ellipsis evaluate htmltools htmlwidgets jsonlite knitr markdown rappdirs renv rmarkdown rprojroot shiny withr]; }; + learnr = derive2 { name="learnr"; version="0.10.1"; sha256="08xwmms6x58y3dsfbl9c6d03145hb4ij97nqr1cc9dxxilmr6x31"; depends=[checkmate ellipsis evaluate htmltools htmlwidgets jsonlite knitr markdown rappdirs renv rmarkdown rprojroot shiny withr]; }; learnrbook = derive2 { name="learnrbook"; version="0.0.2"; sha256="1k17dk8ahn1ifwid1hhx0k7fpgc62zg82y66bbf6nhd4dgdbbv2p"; depends=[]; }; learnstats = derive2 { name="learnstats"; version="0.1.1"; sha256="1sa064cr7ykl4s1ssdfmb3v1sjrnkbwdh04hmwwd9b3x0llsi9vv"; depends=[ggplot2 Rcmdr shiny]; }; - ledger = derive2 { name="ledger"; version="2.0.4"; sha256="19jqy24c8xkpcs9d5w4a1ih474xpnxjnq1q8940mfkx1vq2bz1m5"; depends=[dplyr rio rlang stringr tibble tidyr tidyselect]; }; + ledger = derive2 { name="ledger"; version="2.0.6"; sha256="11j4mzkkgphpwda5g9wl0ppxh5kslx7gqip5b7frmq1vk08fxf1p"; depends=[dplyr rio rlang stringr tibble tidyr tidyselect]; }; leerSIECyL = derive2 { name="leerSIECyL"; version="1.0.2"; sha256="1zx28gpnys9mmhq7wwljfnq92wj1h1vxgqiirnfmn36z942nvmxl"; depends=[RCurl]; }; - lefse = derive2 { name="lefse"; version="0.1"; sha256="1zdmjxr5xa5p3miw79mhsswsh289hgzfmn3mpj1lyzal1qgw1h5m"; depends=[ape fBasics geiger picante SDMTools vegan]; }; legocolors = derive2 { name="legocolors"; version="0.2.0"; sha256="06jbq12jzga1p5jajhnnkk11s9gjw5ngmnrvhmbvirhsbafp0fjv"; depends=[]; }; - leiden = derive2 { name="leiden"; version="0.3.2"; sha256="0kf6fxqf5l5vilm9g7vspc18daw84cwhpafs5szb1skwd6vrfdzw"; depends=[igraph Matrix reticulate]; }; + leiden = derive2 { name="leiden"; version="0.3.3"; sha256="1hh6bmbz6cpqwl4i94gxylgv9x92zbqdg81r8r4ymfy8c70f3df2"; depends=[igraph Matrix reticulate]; }; leiv = derive2 { name="leiv"; version="2.0-7"; sha256="15ay50886xx9k298npyksfpva8pck7fhqa40h9n3d7fzvqm5h1jp"; depends=[]; }; lemon = derive2 { name="lemon"; version="0.4.3"; sha256="0wsn5bfg10wq4dnrgpyraz2bzx9p19c7hf1pwj3h4zmpqfgsdbpw"; depends=[ggplot2 gridExtra gtable knitr lattice plyr scales]; }; lenses = derive2 { name="lenses"; version="0.0.3"; sha256="08akwzlc5gk2rxbh9xp67n5ahdcld60932ascczjv0accrkxizhk"; depends=[magrittr rlang tidyselect]; }; leri = derive2 { name="leri"; version="0.0.1"; sha256="1309v58xdw3p6y2wpnl64vgsds5kvfiary2a3fa041kz23jzbp3c"; depends=[ncdf4 raster]; }; lero_lero = derive2 { name="lero.lero"; version="0.2"; sha256="03ll7jzcay0swwpmxyf0y9k2h8mxx4p5v3ggm9dgdz4j99934l70"; depends=[]; }; - lessR = derive2 { name="lessR"; version="3.9.0"; sha256="1sia0x9rlfy0p7ilpkb32klv5ydd6jgqcl8n877d1m6xn947fy0z"; depends=[colorspace ellipse foreign lattice latticeExtra leaps openxlsx png rmarkdown robustbase sas7bdat triangle viridisLite wesanderson]; }; + lessR = derive2 { name="lessR"; version="3.9.3"; sha256="1r4hsznvrsy6cb1qwy5vnc9b8wbjsya87161z3w9crgxrw1dbls8"; depends=[colorspace ellipse foreign lattice latticeExtra leaps openxlsx png rmarkdown robustbase sas7bdat triangle viridisLite wesanderson]; }; lest = derive2 { name="lest"; version="1.1.0"; sha256="1d69kvdl31crv4ik8bwylq3s3f4skzrjc4x49c79w443g64n2jp9"; depends=[]; }; lestat = derive2 { name="lestat"; version="1.9"; sha256="1skxymdf3ncmdbskh7711xxgwsmwxfxnl52gcgw06jscx6s6wrsd"; depends=[MASS]; }; lexRankr = derive2 { name="lexRankr"; version="0.5.2"; sha256="0vb4m4g88k05yhjla1gwp8ck08356r9dzwal6cq7lb6xm6pl5gvi"; depends=[igraph Rcpp SnowballC]; }; @@ -9600,11 +9615,11 @@ in with self; { lfactors = derive2 { name="lfactors"; version="1.0.4"; sha256="1r8qlwj3zsm233jfx9ag0q5g1knvjmbwl3785pwcd12zi6f68dcc"; depends=[]; }; lfda = derive2 { name="lfda"; version="1.1.3"; sha256="0sk409jx4chs2wzhpfw7rlg9pwpdqg32ncfl3w243ypq73jq0qv3"; depends=[plyr rARPACK]; }; lfe = derive2 { name="lfe"; version="2.8-5"; sha256="1hi3jw2s0xwly5lbvhs8ysm9ky69sixzcf7z6fwlsn9lsdrwb07x"; depends=[Formula Matrix sandwich xtable]; }; - lfl = derive2 { name="lfl"; version="1.4.2"; sha256="0lr7r04jpsrp54g4flpwihymvwa3idxhzfjxfbx4ah16rd47nk5x"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; + lfl = derive2 { name="lfl"; version="2.0"; sha256="1qlsj2lhgz5ivdlyvlg3gjr99qy88nwf78app0bmb2abq3ym82sc"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; lfstat = derive2 { name="lfstat"; version="0.9.4"; sha256="0lm9fyw45kdkkjldkmagykn9p3l3jlw2ky3h00f7j6rqkizjm6r0"; depends=[dygraphs lattice latticeExtra lmom lmomRFA plyr xts zoo]; }; lg = derive2 { name="lg"; version="0.4.1"; sha256="1srlklq6hkb4yd3lbbazswj866i3wzk2524hhj1v45yr7d5qhxv0"; depends=[ggplot2 ks localgauss logspline mvtnorm np tseries]; }; lgarch = derive2 { name="lgarch"; version="0.6-2"; sha256="05xksc4d6dbf5ls4lf2gpk9xyi99fikr7dva88b84rfgads1yhrh"; depends=[zoo]; }; - lgcp = derive2 { name="lgcp"; version="1.5"; sha256="1n1f87qg0y9r22p3q1qjnfrs7xarvsidgqgg6v2bsb55viwy11g3"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat spatstat_utils]; }; + lgcp = derive2 { name="lgcp"; version="1.6"; sha256="1bsf69l81w7182ay4lrq1miqdr4f4jv5ppcalrqhqjcwhkq1nlkb"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat spatstat_utils]; }; lgr = derive2 { name="lgr"; version="0.3.3"; sha256="1ivab8vw4bp206yq21dz7ix3slghjdzh4k6q6w9xpvphwscx0h48"; depends=[R6]; }; lgrdata = derive2 { name="lgrdata"; version="0.1.1"; sha256="0h1crdhqfp6hzx30lp0w015scf2566hhrl2i7mkxy868rkl3aig9"; depends=[]; }; lgtdl = derive2 { name="lgtdl"; version="1.1.5"; sha256="1sixq56d2px36q0xq3kl0zwj2yzm3q8fhgqjvmajcdd5jl8l7130"; depends=[]; }; @@ -9616,16 +9631,16 @@ in with self; { librarysnapshot = derive2 { name="librarysnapshot"; version="0.1.2"; sha256="0v4x564zpm58kxs5n84bi6mcjhbzjg6a2lc30vsc8kbm3qy0nq38"; depends=[]; }; libsoc = derive2 { name="libsoc"; version="0.7"; sha256="1r548rvj98wl0yp6jx5d2qhvy1y4883qp0w3jjk97vp07a1cywn8"; depends=[]; }; libstableR = derive2 { name="libstableR"; version="1.0.2"; sha256="1gkcgbc8a7ks9x8mqmlz98hk55q3qy62izam7csz1s0r5dzsyqcr"; depends=[Rcpp RcppGSL]; }; - lidR = derive2 { name="lidR"; version="2.2.1"; sha256="1yg26r6rhjl44k2x3magij2gn30z7w8vr3njhrwqgmawhgvg0dqq"; depends=[BH data_table future gdalUtils glue lazyeval raster Rcpp RcppArmadillo RCSF rgdal rgeos rgl rlas sf sp]; }; + lidR = derive2 { name="lidR"; version="2.2.3"; sha256="05xz64c1f362gjsdhqjz3za444fjkssijhadn2f1qqqbb1bdd664"; depends=[BH data_table future gdalUtils glue lazyeval raster Rcpp RcppArmadillo RCSF rgdal rgeos rgl rlas sf sp]; }; lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.6"; sha256="0v8xrnmviq938x779f3h55iq8bhvbkwgz35v1dxgzbxwclj7jycl"; depends=[markovchain Rcpp]; }; lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; }; - lifecycle = derive2 { name="lifecycle"; version="0.1.0"; sha256="11rk7hkw63rfrf4aqmb4xrb88kg95xh8hajpjvjfwjym2v02h74n"; depends=[glue rlang]; }; + lifecycle = derive2 { name="lifecycle"; version="0.2.0"; sha256="0912865c6675fsblrfdk6s568krsj1x8qbk1kipy7m05xs6nwx19"; depends=[glue rlang]; }; lifelogr = derive2 { name="lifelogr"; version="0.1.0"; sha256="1wygvw61ygpww0kahxhmjdncwg4zc2cshs0brzw18nfqaj8vpfav"; depends=[dplyr fitbitScraper ggplot2 lazyeval lubridate modelr plyr R6 shiny stringr tibble tidyr]; }; lift = derive2 { name="lift"; version="0.0.2"; sha256="0ynsyl6lw7z7bvwzk2idgxzzqji5ffnnc3bll9h4gwdw666g7fln"; depends=[]; }; liftLRD = derive2 { name="liftLRD"; version="1.0-8"; sha256="1m24f4mc70l808cpkcdm91hzb5b3bkzibvgyfi9zs6cs8apcvmy3"; depends=[adlift nlt]; }; liftr = derive2 { name="liftr"; version="0.9.2"; sha256="0azi831c4f0vcq27a3q86vj90zvwrzcy4plhj9hqkk4qz8xw113x"; depends=[knitr rmarkdown rstudioapi stringr yaml]; }; liger = derive2 { name="liger"; version="1.0"; sha256="0vn49p8ldb7ss35by04qh7r1arn5w8gci1rqbyfqw8ignwjrdc7s"; depends=[matrixStats Rcpp RcppArmadillo]; }; - lightr = derive2 { name="lightr"; version="0.1"; sha256="0ijqsgszjgxp3xci6fr17krbzns6r0qyxna60ad85c5ri868rmzs"; depends=[pbmcapply xml2]; }; + lightr = derive2 { name="lightr"; version="1.0"; sha256="13fx84f2cwxs4785q3bl98ap8b6pgp9587cmmhspx231jirp6w6q"; depends=[future_apply progressr xml2]; }; lightsout = derive2 { name="lightsout"; version="0.3"; sha256="0ypniqf9wk35dd9j57wd7gxchr5hy25fwhmkndz2z8b9ajhm3c9b"; depends=[magrittr shiny shinyjs]; }; likeLTD = derive2 { name="likeLTD"; version="6.3.0"; sha256="1mjf4667xd9pf2684d7vqaj54l5s9pgljn4vkfp32wzbfknq6y8r"; depends=[DEoptim gdata ggplot2 gtools rtf]; }; likelihood = derive2 { name="likelihood"; version="1.7"; sha256="0q8lvwzlniijyzsznb3ys4mv1cqy7ibj9nc3wgyb4rf8676k4f8v"; depends=[nlme]; }; @@ -9633,7 +9648,7 @@ in with self; { likelihoodExplore = derive2 { name="likelihoodExplore"; version="0.1.0"; sha256="13cnql7pbx8qq1j3cfb3lkzzf2k55shpfa0jd00z30ys6imxzcfn"; depends=[lazyeval plyr]; }; likert = derive2 { name="likert"; version="1.3.5"; sha256="0c4irxs7pp1z8nj4s8cq23daw4h94n3h7x4f6q1d85614qcl9l3p"; depends=[ggplot2 gridExtra plyr psych reshape2 xtable]; }; lilikoi = derive2 { name="lilikoi"; version="0.1.0"; sha256="1v7xrkv8xxmq6cdww4z1p9vlvy71cqgd3yb5mal4v9w2wrfaps6z"; depends=[caret corrplot devtools dplyr e1071 gbm ggplot2 glmnet hash Hmisc infotheo Matrix pamr princurve pROC R_oo randomForest reshape2 RWeka stringr]; }; - lillies = derive2 { name="lillies"; version="0.2.5"; sha256="0cqlxcq8yyw87m018hv8s82d6qmh9x93j0hyqycl6w5fdpp62hf0"; depends=[ddpcr dplyr knitr pracma progress rlang survival tidyr]; }; + lillies = derive2 { name="lillies"; version="0.2.7"; sha256="167hlqj9ivsjxhlfv3z1c017iqbj08aig86ncrk9inpqj3zvkyxy"; depends=[ddpcr dplyr knitr pracma progress rlang survival tidyr]; }; limSolve = derive2 { name="limSolve"; version="1.5.6"; sha256="1829rd2cnd8qj80z9a7sgc7gx4sf3kvl5g6d2a0lqqw30f9sjzmr"; depends=[lpSolve MASS quadprog]; }; lime = derive2 { name="lime"; version="0.5.1"; sha256="021wz43dfc3f2k275c98hcnnx7dyyjj18dm2zf8vh7rbk9bnf0sj"; depends=[assertthat ggplot2 glmnet gower htmlwidgets Matrix Rcpp RcppEigen shiny shinythemes stringi]; }; limitplot = derive2 { name="limitplot"; version="1.2"; sha256="0wj1xalm80fa5pvjwh2zf5hpvxa3r1hnkh2z9z285wkbrcl0qfl2"; depends=[]; }; @@ -9648,11 +9663,11 @@ in with self; { linemap = derive2 { name="linemap"; version="0.1.0"; sha256="0qkbmpfr742xbs3xn5ppx6q0prwrr9mk1c1mv050cm47dm7jcs6l"; depends=[sf]; }; lineqGPR = derive2 { name="lineqGPR"; version="0.1.1"; sha256="180rvmpasdw8r3w5lw6dxg5jkj875dklvifi2msyp0vaq1nbpbwp"; depends=[broom ggplot2 MASS Matrix mvtnorm nloptr plot3D purrr quadprog tmg TruncatedNormal]; }; lineup = derive2 { name="lineup"; version="0.37-11"; sha256="0lk2wm8wsaaxw3j7yvmg6qif0r0s1jlwqyg73d3xjnjhxgy03zp4"; depends=[class qtl]; }; - lingtypology = derive2 { name="lingtypology"; version="1.0.15"; sha256="1iy33d29fdwpsw13094ykjijidhpcgkxqdqxfmlw4s6ma08sx4gh"; depends=[leaflet leaflet_minicharts rowr stringdist]; }; + lingtypology = derive2 { name="lingtypology"; version="1.1.2"; sha256="079xh4h8fwa9pm6q145fnvrj1bzi7j2lm7850qqmbqkpz62b1yg6"; depends=[leaflet leaflet_minicharts stringdist]; }; linguisticsdown = derive2 { name="linguisticsdown"; version="1.2.0"; sha256="1y2g8h0p4q4mjrawzyprsdw8ynqcbpnjypyhdaf03pcwqglcirkl"; depends=[DT knitr magrittr miniUI rstudioapi shiny stringr]; }; - link2GI = derive2 { name="link2GI"; version="0.4.1"; sha256="1frxm3xyz9bjym4h95bnwgmvgix6n8jz1bvg3pvhxczb2qld52wb"; depends=[devtools R_utils roxygen2 sf stringr]; }; + link2GI = derive2 { name="link2GI"; version="0.4.3"; sha256="1f6pp8cw2cgg669dwgbsmcbq870y5v5qjbdkrrxzfxbyk4j24fqx"; depends=[devtools R_utils raster roxygen2 sf stringr]; }; linkR = derive2 { name="linkR"; version="1.1.1"; sha256="1748r7s5g0gvsmghrb7l5lmdbzb9f4vkbgj51v308jr64r1k7l93"; depends=[svgViewR]; }; - linkcomm = derive2 { name="linkcomm"; version="1.0-11"; sha256="1w5sfmzvrk30fr161pk0cy5nj8kasqm6hqgyafq6r280b5s272cb"; depends=[dynamicTreeCut igraph RColorBrewer]; }; + linkcomm = derive2 { name="linkcomm"; version="1.0-12"; sha256="04725prwikkzqjq8say8b7f1k5z2c5qzsmsflynp1my893dlal0j"; depends=[dynamicTreeCut igraph RColorBrewer]; }; linkim = derive2 { name="linkim"; version="0.1"; sha256="0yvyid9x59ias8h436a202hd2kmqvn8k1zcrgja2l4z2pzcvfn91"; depends=[]; }; linkprediction = derive2 { name="linkprediction"; version="1.0-0"; sha256="0p2abdq6ad689236w2d0khlycpjgy6j7xrlb96ngl6csgxwm07bl"; depends=[igraph intergraph]; }; linkspotter = derive2 { name="linkspotter"; version="1.2.0"; sha256="0wk27jn8jr5rskjxbixshmp2dl0l74hrc8r6x3rvhy0x0b00zks2"; depends=[dplyr energy ggplot2 Hmisc infotheo mclust minerva pbapply rAmCharts shiny tidyr visNetwork]; }; @@ -9660,19 +9675,18 @@ in with self; { linpk = derive2 { name="linpk"; version="1.0"; sha256="14l3vv507z7x63ziynp07902599syah0icvzq4rxfjf48bf96l63"; depends=[mvtnorm]; }; linprog = derive2 { name="linprog"; version="0.9-2"; sha256="1ki14an0pmhs2mnmfjjvdzd76pshiyvi659zf7hqvqwj0viv4dw9"; depends=[lpSolve]; }; lintools = derive2 { name="lintools"; version="0.1.3"; sha256="1wv94j0j89zq15b80x0cylfxar5ajrdrcdn62mkgjij3m8zqs7fa"; depends=[]; }; - lintr = derive2 { name="lintr"; version="2.0.0"; sha256="09gbci4v5n4gsfzminly8332fw7faxdi1kkyvpa10dydx02sjcwb"; depends=[codetools crayon cyclocomp digest httr jsonlite knitr rex rstudioapi stringdist testthat xml2 xmlparsedata]; }; + lintr = derive2 { name="lintr"; version="2.0.1"; sha256="14yfh641afg6griaadbdciyr3k94fl55s055qwzghgk5gdsj61zy"; depends=[codetools crayon cyclocomp digest httr jsonlite knitr rex rstudioapi testthat xml2 xmlparsedata]; }; + lipidomeR = derive2 { name="lipidomeR"; version="0.1.2"; sha256="1a9zi821mn7w18lg7psc9bagi3c5snvwqgda2f10rw5jff60fkfd"; depends=[BiocManager dplyr ggplot2 knitr limma reshape2 shadowtext stringr tableone tidyr]; }; liqueueR = derive2 { name="liqueueR"; version="0.0.1"; sha256="0rpjib0dz39la63gy9bw9gmdfq2fcx40y4y4wcb6ky41qcjdp1nd"; depends=[itertools]; }; liquidSVM = derive2 { name="liquidSVM"; version="1.2.4"; sha256="1fka0jbc200n0il1qbp5nb9819afi11b1ndwqpsd6bhfjgrcga8m"; depends=[]; }; lira = derive2 { name="lira"; version="2.0.1"; sha256="10bjmapnlw5z5cnbdpkwisvjkmk7zi9xqrvgmb5psj317zcxfc2p"; depends=[coda rjags]; }; lisa = derive2 { name="lisa"; version="0.1.1"; sha256="1i5fbcac24rp8s7z2v23aqy7xv0p610zj5xfb6vscsvhdlvg4w1a"; depends=[]; }; lisp = derive2 { name="lisp"; version="0.1"; sha256="025sq46277q9i21189cbmx5dnrh5wfshc5k6la1wjilhr1iqf6nj"; depends=[]; }; lisrelToR = derive2 { name="lisrelToR"; version="0.1.4"; sha256="0zicq0z3hhixan1p1apybnf3v5s6v6ysll4pcz8ivygwr2swv3p5"; depends=[]; }; - list = derive2 { name="list"; version="9.1"; sha256="17d8pscn56wlp6pcz2mvqjmrwv22fhphiiblrnfnd36m65nd58dm"; depends=[arm coda corpcor gamlss_dist magic MASS mvtnorm quadprog sandwich VGAM]; }; listWithDefaults = derive2 { name="listWithDefaults"; version="1.2.0"; sha256="1rv9jq9zlr5dm08mimba6ni2p5vkfybrgrqk1alm7y6mqpx56byp"; depends=[assertthat]; }; - listarrays = derive2 { name="listarrays"; version="0.3.0"; sha256="0y3485wcirr7srjn4ahx0ym3z9y4a66v6g1pyb6czxzj1wi0i0sn"; depends=[]; }; + listarrays = derive2 { name="listarrays"; version="0.3.1"; sha256="0nfpqywq9pl9yj566y0jw0h89g0ppsc614538ns1jc3l5r2myils"; depends=[]; }; listdtr = derive2 { name="listdtr"; version="1.0"; sha256="08drps03nndpdxswyv8bjm1bcckjav5pjj7fdx3dzyn0v4dfy619"; depends=[ggplot2]; }; listenv = derive2 { name="listenv"; version="0.8.0"; sha256="0ps8bk7zlhbviawrw7vw25skjq81hkk3ijyi6g74dmfqy8zsyapx"; depends=[]; }; - listless = derive2 { name="listless"; version="0.0-2"; sha256="1gr6l4vih7j28kg2mj1xj2yhlpwjc4p894vsxri25vq0r9kgcdym"; depends=[magrittr tidyr]; }; listviewer = derive2 { name="listviewer"; version="3.0.0"; sha256="0zirxdj58h43062f68h6nqcgmpnvdglxx3kjbs4i4k0z9wvqhx8r"; depends=[htmltools htmlwidgets shiny]; }; liteq = derive2 { name="liteq"; version="1.1.0"; sha256="0w3w9f6374qwvlrqknavqh9b38n5q1r6aw5zmz5lahvadalwdbwi"; depends=[assertthat DBI rappdirs RSQLite]; }; litteR = derive2 { name="litteR"; version="0.7.0"; sha256="070g65z50dqffa6c5b3n7yp3zmx9hpk7k3vspnpcmsgpd32r0h6n"; depends=[dplyr fs ggplot2 purrr readr rlang rmarkdown stringr tidyr yaml]; }; @@ -9701,8 +9715,8 @@ in with self; { lmeVarComp = derive2 { name="lmeVarComp"; version="1.1"; sha256="0m6syydy89c52hhi0w503l5vkgya2d5ps70z5wmdd39nm4jna68w"; depends=[]; }; lmec = derive2 { name="lmec"; version="1.0"; sha256="09shj01h2dl5lh7ch0wayr7qyhlmk0prv3p1vfgy91sn0wpbqlxr"; depends=[mvtnorm]; }; lmem_qtler = derive2 { name="lmem.qtler"; version="0.1.1"; sha256="0qbllj66y294n1m8dsyrnwyvzscbzg8mb2dmjyghcrfaz925vkin"; depends=[lattice lme4 pastecs qtl stringr]; }; - lmenssp = derive2 { name="lmenssp"; version="1.2"; sha256="1vc90x3y1vzmzblc15kqar3nd3c3p8p9nvmpk0ib52n0qv5pr6wz"; depends=[geoR MASS mvtnorm nlme]; }; lmerTest = derive2 { name="lmerTest"; version="3.1-1"; sha256="0r2vvs3nl6p8xla3gd943khb4ixp0alvspqpnz2y6n3wk8zgh3jj"; depends=[ggplot2 lme4 MASS numDeriv]; }; + lmeresampler = derive2 { name="lmeresampler"; version="0.1.1"; sha256="13i0crk6agw5pcj3znvxj60jfsmncnir7ahwdczgm7kh08hk0f6l"; depends=[boot dplyr Matrix nlmeU plyr RLRsim]; }; lmf = derive2 { name="lmf"; version="1.2"; sha256="1xqlqmjl7wf5b2s2a1k1ara21v74b3wvwl4mhbj9dkdb0jcrgfva"; depends=[]; }; lmfor = derive2 { name="lmfor"; version="1.4"; sha256="012bk6r6gf6y9skfch2pqr2irv70108sz1x6hakl1bifb4lgnbjp"; depends=[magic nlme spatstat]; }; lmm = derive2 { name="lmm"; version="1.2"; sha256="1xymcizqfqh2jp0rxgfgniflyqzgcwg04g9mllva5xgc1ydcg69k"; depends=[]; }; @@ -9715,7 +9729,7 @@ in with self; { lmom = derive2 { name="lmom"; version="2.8"; sha256="1lnj41gynaar5isyijg5nbll64qdxa12dnqvz7lxhaclqcjskqna"; depends=[]; }; lmomPi = derive2 { name="lmomPi"; version="0.5.0"; sha256="07ggfzgvhc6kkqs8bbs6z01rbhgb0ki2y4li6r0nkiby1wcpx0py"; depends=[lmom stringr]; }; lmomRFA = derive2 { name="lmomRFA"; version="3.3"; sha256="113sz2lgb3yv3ayy3x831qww3d088yw2iyjrdc8jfhq6id1w9giq"; depends=[lmom]; }; - lmomco = derive2 { name="lmomco"; version="2.3.2"; sha256="1gqwn5yjd3zcwd5nysayf88vjhj2j1qxfgqcw63q7f2ih0xk1lqp"; depends=[goftest Lmoments MASS]; }; + lmomco = derive2 { name="lmomco"; version="2.3.6"; sha256="18qpkx601gzy33d9kfrpf6mxxb9z6rkz030cx3drb4w5n6langjb"; depends=[goftest Lmoments MASS]; }; lmreg = derive2 { name="lmreg"; version="1.2"; sha256="02a4nqqcfkjlq21mpk8abd4lj4ib2nps3ndf7zgmzygkd1z0df18"; depends=[MASS]; }; lmridge = derive2 { name="lmridge"; version="1.2"; sha256="091rznzh77bmsv7sw9xmsq6s9pnljyq7qyl74kgcxss718134jr3"; depends=[]; }; lmtest = derive2 { name="lmtest"; version="0.9-37"; sha256="02nasm0j2vwkhz11dxqixs23msy1s3yj0jps6949fmgh9gwjkjfx"; depends=[zoo]; }; @@ -9725,8 +9739,8 @@ in with self; { loa = derive2 { name="loa"; version="0.2.45.4"; sha256="0dcpadv453885a2s8l064zn1xswi2v819154j822jr22kd7bj57v"; depends=[lattice MASS mgcv plyr png RColorBrewer rgdal RgoogleMaps sp]; }; loadr = derive2 { name="loadr"; version="0.1.2"; sha256="1zqg90hxw6c3k3gd0caj8fh5ym3f97gsr9cvi6ndlzqh4957cd5n"; depends=[]; }; lobstr = derive2 { name="lobstr"; version="1.1.1"; sha256="0vkif17825x33cz8r89j0qph4wj5l8fzfgl8nh2g7m2v140cxjdq"; depends=[crayon Rcpp rlang]; }; - locStra = derive2 { name="locStra"; version="1.2"; sha256="1aka3fl8g0v3md1nx50z2zw3bb365lskysdy64n6rlgibmlflwc5"; depends=[Matrix Rcpp RcppEigen Rdpack]; }; - localICE = derive2 { name="localICE"; version="0.1.0"; sha256="0pch4mdn0bj3rlqsai3lqrkv6pw04238n9qvlwzwcwii3wyqhkgs"; depends=[checkmate ggplot2]; }; + locStra = derive2 { name="locStra"; version="1.3"; sha256="1lrdjr63ybdmdm74b76ahc71d9vhrlqbcc9193s7kbhzcms7f60a"; depends=[Matrix Rcpp RcppEigen Rdpack]; }; + localICE = derive2 { name="localICE"; version="0.1.1"; sha256="1pyq6kdahsy9qa0jzmring48r0i9h4rkp8lxpf9afksgm1qn0c5z"; depends=[checkmate ggplot2]; }; localIV = derive2 { name="localIV"; version="0.2.1"; sha256="09z5iqqa9ia4v88fbgf23ww8wxywpyndhzl5mhsp5dvpnj0vyhx1"; depends=[KernSmooth mgcv sampleSelection]; }; localModel = derive2 { name="localModel"; version="0.3.12"; sha256="1yg61zia8gqgzbg33k6q43ni04cj6y9l3k8vdcw8j1qzasnhz0b2"; depends=[ggplot2 glmnet ingredients partykit]; }; localgauss = derive2 { name="localgauss"; version="0.40"; sha256="0y0pcg2i7lr4wipxawn06hy0q11znhcn2ah6rqwnlyy8pab70pyq"; depends=[foreach MASS matrixStats]; }; @@ -9737,7 +9751,7 @@ in with self; { locpol = derive2 { name="locpol"; version="0.7-0"; sha256="1p915n0l09kbwkly627074jslxl01yssp1rf0c7sygvsw6sgy5lm"; depends=[]; }; lodGWAS = derive2 { name="lodGWAS"; version="1.0-7"; sha256="0g5b44d3wb5hnx5l2n76myb1pc9ml3a052n1a4gvgqapa5as35s2"; depends=[rms survival]; }; loder = derive2 { name="loder"; version="0.2.0"; sha256="0m6g8c25dmq0wgpy8y6cbggymxdvqwb6lp2yzs5bgpq183512spb"; depends=[]; }; - lodi = derive2 { name="lodi"; version="0.9.1"; sha256="1207lbin53wlacs6kk8gwzbwllddh4byvs6ai6b9d345k6f9gr56"; depends=[rlang]; }; + lodi = derive2 { name="lodi"; version="0.9.2"; sha256="16xqcza87gsqi6kzx0bdv3w9zyvvppjd20rq08lc8vb75nlkx1yb"; depends=[rlang]; }; loe = derive2 { name="loe"; version="1.1"; sha256="1n16pgfxg9vcn729xxjbbvavg2ywbdcch9v2ph8nv3z7psc0q46c"; depends=[MASS]; }; log4r = derive2 { name="log4r"; version="0.3.2"; sha256="18r5g0817wfn0kmqwv6vf7r2vavi0xh6mqmxrh59y9w3c84npfhl"; depends=[]; }; logKDE = derive2 { name="logKDE"; version="0.3.2"; sha256="09gachibj0klqa9ijw572lwphbh9qj6zqray5byq1dh7zsiq516q"; depends=[pracma Rcpp]; }; @@ -9750,8 +9764,7 @@ in with self; { logcondiscr = derive2 { name="logcondiscr"; version="1.0.6"; sha256="08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd"; depends=[cobs Matrix mvtnorm]; }; logger = derive2 { name="logger"; version="0.1"; sha256="00gfy2i58qn5na8cxxrkm1pvsw85xx2gdk0y6dzxhcjfx3wyplaw"; depends=[]; }; logging = derive2 { name="logging"; version="0.10-108"; sha256="13gd40ygx586vs6xcp6clg69a92aj8zxlk1rn3xzkx8klfjimjc5"; depends=[]; }; - loggit = derive2 { name="loggit"; version="1.1.1"; sha256="1w9a3mbf863dk6lnd95mwr15rxjpv1rra1z45jnqk8w56g1s7q4d"; depends=[dplyr jsonlite]; }; - loggle = derive2 { name="loggle"; version="1.0"; sha256="0r1r8m2ckva17vbvwkzhq1lx6bap0kbfj9hxyk46adslcf3xxrxp"; depends=[doParallel foreach glasso igraph Matrix sm]; }; + loggit = derive2 { name="loggit"; version="1.2.0"; sha256="0nr6hmmdxgqaf3d0fjvc2l40vfwm6xsw5k87gcqdck0knal8pw7d"; depends=[dplyr jsonlite]; }; logiBin = derive2 { name="logiBin"; version="0.3"; sha256="06y5bqm3j6xdr1cd607v2sqkghnd2bv6bvxc6cz8dvp8jabqa0zm"; depends=[data_table doParallel foreach iterators partykit]; }; logihist = derive2 { name="logihist"; version="1.0"; sha256="1q3322rh3g31c5i80aw54pln0m1jgxmbx30cn31nlh3ijkvnpq9a"; depends=[ggplot2]; }; logistf = derive2 { name="logistf"; version="1.23"; sha256="0f1qn7q3h0qg2qdiz69ab03qvl4xhizqg304vjak72390nj25nss"; depends=[mgcv mice]; }; @@ -9773,7 +9786,7 @@ in with self; { longitudinal = derive2 { name="longitudinal"; version="1.1.12"; sha256="1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l"; depends=[corpcor]; }; longitudinalData = derive2 { name="longitudinalData"; version="2.4.1"; sha256="0lnvcfgj721bawl1ciz0jw83mfsnzkhg6jn824vr3qdm4rbib2vd"; depends=[class clv misc3d rgl]; }; longitudinalcascade = derive2 { name="longitudinalcascade"; version="0.3.2.1"; sha256="03nqglxyz6qfalxdnyh2aarxv3agn0b3r4nhsji4v9703h4m1fvg"; depends=[dplyr ggplot2 lubridate rlang scales survival tidyr zoo]; }; - longmemo = derive2 { name="longmemo"; version="1.1-1"; sha256="0myn2xpg0mw3x5zma0y1dza2jg3x9zj9z8xv2z8l2q9pm228xn0d"; depends=[]; }; + longmemo = derive2 { name="longmemo"; version="1.1-2"; sha256="01rj5x9cgscsrakbx9155mbvs35fd3j484cfz5cds9vl521fjr3r"; depends=[]; }; longpower = derive2 { name="longpower"; version="1.0-19"; sha256="0m5c544d6vl2zhbyi0spy7ylvr366m7vrmk3xfghcvd5anbzpjk6"; depends=[lme4 nlme]; }; longurl = derive2 { name="longurl"; version="0.3.0"; sha256="0ysa70zlkk3ybddj3yd3vbhjnkjbrisiz5a2hgbjx10p33m1r3am"; depends=[dplyr httr purrr]; }; loo = derive2 { name="loo"; version="2.2.0"; sha256="1hq1zcj76x55z9kic6cwf7mfq9pzqfbr341jbc9wp7x8ac4zcva6"; depends=[checkmate matrixStats]; }; @@ -9787,7 +9800,7 @@ in with self; { lorec = derive2 { name="lorec"; version="0.6.1"; sha256="0mgypd8awixh1lzbh5559br4k7vi3pfmwniqhgh68wc06sc6bn65"; depends=[]; }; lorentz = derive2 { name="lorentz"; version="1.0-2"; sha256="0napn1j6gwilskjnv2hjrxzrbcbh7cvfj578h0la9bpkm1xhi7di"; depends=[emulator magrittr tensor]; }; lori = derive2 { name="lori"; version="2.2.0"; sha256="1jsnfrkn6zn20gs8qhw5znfzaqp9j274yfqajcgfvy916j50acac"; depends=[data_table rARPACK svd]; }; - lotri = derive2 { name="lotri"; version="0.1.1"; sha256="1zqp56hxqyf9a820p2d272ykqnrym2qc5sbmah68qv8ql9n1z9qg"; depends=[Matrix]; }; + lotri = derive2 { name="lotri"; version="0.2.1"; sha256="0szhng56b4pa3wp4ffyvz647ad1xnk14xavnfqcr9wi022r22mc1"; depends=[Matrix]; }; lowmemtkmeans = derive2 { name="lowmemtkmeans"; version="0.1.2"; sha256="08zhdw48rzw47yzhg4s37bkliyngxs46cyb57dvng1s3m0w0dhvi"; depends=[Rcpp RcppArmadillo]; }; lpSolve = derive2 { name="lpSolve"; version="5.6.15"; sha256="1fpkyjyqykwa1dxnhiky01pm09syxg169lm7hpy39bdbg10vw9s6"; depends=[]; }; lpSolveAPI = derive2 { name="lpSolveAPI"; version="5.5.2.0-17.6"; sha256="04ah9xjr3574i3sfif90f6mln1cxpq7ia2nza30j5pfijqr7vwgd"; depends=[]; }; @@ -9814,7 +9827,7 @@ in with self; { lshorth = derive2 { name="lshorth"; version="0.1-6"; sha256="0nbjakx0zx4fg09fv26pr9dlrbvb7ybi6swg84m2kwjky8399vvx"; depends=[]; }; lsl = derive2 { name="lsl"; version="0.5.6"; sha256="1hwzklx1qp5ljc059j2hridg3caw4cgn7rbqs8xh2arzcvqdw3rb"; depends=[ggplot2 lavaan reshape2]; }; lslx = derive2 { name="lslx"; version="0.6.9"; sha256="0jfy6j5z53daarv8d8vqsgqdiy6s720m7qlcvrhicc8drvj88mrm"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; }; - lsm = derive2 { name="lsm"; version="0.1.9"; sha256="1cyqbsd12m5m8f1vx8lyv21jdcs308fkp4zqlz2482m5fiinlaj2"; depends=[]; }; + lsm = derive2 { name="lsm"; version="0.2.0"; sha256="1rc55w526ss99parjb40w3fbqlxfkhzknxysmqn4fkxrhrylzqn5"; depends=[]; }; lsmeans = derive2 { name="lsmeans"; version="2.30-0"; sha256="1z35dzfgib0fk201gzjhgmnryhl3mkz50gz8g6nfv4mj9kzc5x5f"; depends=[emmeans]; }; lspartition = derive2 { name="lspartition"; version="0.4"; sha256="1n0pag5l4kx211dl5z9xbqijp7l04jcm0i6jgvkk2b0x9v32q4r5"; depends=[combinat dplyr ggplot2 MASS matrixStats mgcv pracma]; }; lspline = derive2 { name="lspline"; version="1.0-0"; sha256="0bc1nfpp1r5fi8rrg295k4r8pm03baqplrzwmk3sn4kdbp0apvgk"; depends=[]; }; @@ -9826,7 +9839,7 @@ in with self; { ltbayes = derive2 { name="ltbayes"; version="0.4"; sha256="0kv5k56hmc1m7bv5pmmmk46822szsgwqgpwydn0x56az7xn6hjk6"; depends=[mcmc MHadaptive numDeriv]; }; ltm = derive2 { name="ltm"; version="1.1-1"; sha256="1qrgzwx5l58qf5rfp1knxc84r0g943q5sdr3ky74zzwpnmrf2vf7"; depends=[MASS msm polycor]; }; ltmix = derive2 { name="ltmix"; version="0.2.0"; sha256="1p0p904lvhxwwj3vn0rrl6ydygnldgxqpk82y3b9p2ywvvfh86yv"; depends=[gtools pracma]; }; - ltmle = derive2 { name="ltmle"; version="1.1-0"; sha256="1mlsggl0vdnlgf8j0bjmh4zrfdpmkfi9jhar35npxz9r0yfjmw8f"; depends=[Matrix matrixStats speedglm]; }; + ltmle = derive2 { name="ltmle"; version="1.2-0"; sha256="1mqrf77319cjs3q48iigrkjc3rjibz7qyij49a7l0nim3c1hd0b0"; depends=[Matrix matrixStats speedglm]; }; ltsa = derive2 { name="ltsa"; version="1.4.6"; sha256="10wmw9r00400ng2zlysd8jqgypjclshxj83x32002j2a9cz4f186"; depends=[]; }; ltsbase = derive2 { name="ltsbase"; version="1.0.1"; sha256="16p5ln9ak3h7h0icv5jfi0a3fbw5wdqs3si69sjbn8f5qs2hz7yp"; depends=[MASS robustbase]; }; ltsk = derive2 { name="ltsk"; version="1.0.8"; sha256="1ykgz5cas924kmq9ak2j8vhr7gg9s458qarqkmyg9wdfj1srqi7p"; depends=[fields gstat sp]; }; @@ -9837,7 +9850,7 @@ in with self; { ludic = derive2 { name="ludic"; version="0.1.8"; sha256="1yvv3h7arm8hp89j9nr5vdl8ahxcpggi2qq431l7xbw9jka41qdp"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; }; lue = derive2 { name="lue"; version="0.2.1"; sha256="0is5rd1dz91bzphmfbbzi3s6rgc5g9qza2r26k70xs67dgn0qbjq"; depends=[ncdf4 raster]; }; lulcc = derive2 { name="lulcc"; version="1.0.4"; sha256="00ymbp20kbjyzrsrxa262y0y7fj4jgsbqf56aapb657xvafxvy5q"; depends=[lattice raster rasterVis ROCR]; }; - lumberjack = derive2 { name="lumberjack"; version="1.1.3"; sha256="086xm1br03pwyv6qjmv4fjq5pm9p287zglpxrirr4s4giv3q45am"; depends=[R6]; }; + lumberjack = derive2 { name="lumberjack"; version="1.1.4"; sha256="18idnirla4v0571gilc4qmjz2s25rsmjy4f1y98pdazrbxdllds9"; depends=[R6]; }; lunar = derive2 { name="lunar"; version="0.1-04"; sha256="0nkzy6sf40hxkvsnkzmqxk4sfb3nk7ay4rjdnwf2zym30qax74kk"; depends=[]; }; lutz = derive2 { name="lutz"; version="0.3.1"; sha256="15b8gzwykxyqycjba319jpsbny07j8ny9y4lnrg8mcf488ycz57y"; depends=[lubridate Rcpp]; }; luzlogr = derive2 { name="luzlogr"; version="0.2.0"; sha256="0n0cm94aianwcypa0gwdjvyy3dwbkfv6zi1gq2jn57b41fg20lq5"; depends=[assertthat]; }; @@ -9846,7 +9859,7 @@ in with self; { lvmcomp = derive2 { name="lvmcomp"; version="1.2"; sha256="08hs97bdz4n0bdhvqqq5xywfy140s69c750rn38criq4cw4gm3z7"; depends=[coda Rcpp RcppArmadillo]; }; lvnet = derive2 { name="lvnet"; version="0.3.5"; sha256="1wqqxavs2s0hmlifyaa1jrlc8hj4z72fkgjckkmh9m2r4jp9zy0g"; depends=[corpcor dplyr glasso lavaan Matrix mvtnorm OpenMx psych qgraph semPlot]; }; lvplot = derive2 { name="lvplot"; version="0.2.0"; sha256="01sisj2vbx2yb5w9cjzyaf9j46vh4kkw05xccq1f7wmsg69zmj6b"; depends=[ggplot2 RColorBrewer]; }; - lwgeom = derive2 { name="lwgeom"; version="0.1-7"; sha256="1l3f9six3x56j32l7jdb2iym8641k2vy94xjxzf5219cvx6p6abp"; depends=[Rcpp sf units]; }; + lwgeom = derive2 { name="lwgeom"; version="0.2-1"; sha256="00vm7dvy3s2vkggry9knmr3f39nbiacmwiwd0nvrd21yg47k2qi2"; depends=[Rcpp sf units]; }; lxb = derive2 { name="lxb"; version="1.5"; sha256="16x1mvhxqhvibzmv6mlqcmkgic2sha1xagf7r2azmn4z8x1m9w6n"; depends=[]; }; lymphclon = derive2 { name="lymphclon"; version="1.3.0"; sha256="1jns41sk2rx1j3mg06dzy434k30gpfhbkn6s47fmyv1y8701vfl0"; depends=[corpcor expm MASS]; }; m2b = derive2 { name="m2b"; version="1.0"; sha256="0agzw67mmwrw1f61yn24z5w1pgjssdapg3li0a53i3ylnij45mzr"; depends=[caret caTools e1071 geosphere ggplot2 randomForest]; }; @@ -9855,6 +9868,7 @@ in with self; { mBvs = derive2 { name="mBvs"; version="1.3"; sha256="0vxwdi45pd79c3lz507wlw2alvf501q27lwvd34j6y68p3vyv1vj"; depends=[]; }; mDAG = derive2 { name="mDAG"; version="1.2.2"; sha256="0k85sl0jmpcpiz92cz6x3kd8jc6yyfv9z4wm1kyaikcf5q4qlad4"; depends=[bnlearn logistf mgm nnet pcalg Rcpp RcppArmadillo]; }; mExplorer = derive2 { name="mExplorer"; version="1.0.0"; sha256="1563d9r7f25vw5vsph21z3dwz9n40dpaiyx28ay1bbp5i1x2l3rb"; depends=[nnet qusage]; }; + mFLICA = derive2 { name="mFLICA"; version="0.1.0"; sha256="0cpbhk8hkiwnc6blly6x2v8lv4f86x30lk27f89lps8myj69iws4"; depends=[dtw ggplot2]; }; mFilter = derive2 { name="mFilter"; version="0.1-5"; sha256="0anc93mciq8j64knd0i38sfgv10w1gd375wnfzn1fq8sj3lby7kb"; depends=[]; }; mGSZ = derive2 { name="mGSZ"; version="1.0"; sha256="08l98i75h2h8kx9ksvzp5qr8jhf0l6n4j7rg8fcn7hk8chn8v5zh"; depends=[Biobase GSA ismev limma MASS]; }; mHG = derive2 { name="mHG"; version="1.1"; sha256="1rz5ncrvvv9h9grls15apa63v2nh9j87fmp4mwjjil37jx6a5zki"; depends=[]; }; @@ -9865,7 +9879,7 @@ in with self; { mRpostman = derive2 { name="mRpostman"; version="0.3.0"; sha256="18ky3xpgb4rns65574jr9fy8jwi6nrz6py9ai8nqf2r1s0bdmww3"; depends=[assertthat base64enc curl magrittr stringr]; }; mSTEM = derive2 { name="mSTEM"; version="1.0-1"; sha256="0mh09mqqpq9k8jrxs9d39009idld3b4y98ik75czdy580jmdg7mm"; depends=[doParallel foreach latex2exp]; }; mSimCC = derive2 { name="mSimCC"; version="0.0.1"; sha256="1f15r214srcdb4yacmy4hq890a674iqd2s7bry5dk20k46qdl026"; depends=[doParallel foreach]; }; - maSAE = derive2 { name="maSAE"; version="1.0.0"; sha256="0z349p4bipqrfn60cf14b19d1d1b30a302mxkyaknf32n0rz18lk"; depends=[]; }; + maSAE = derive2 { name="maSAE"; version="2.0.0"; sha256="0hg7d7n6b7z510d6y2c9bcgg4vmxjvw095n77apsmymmslfmd8ma"; depends=[]; }; mable = derive2 { name="mable"; version="2.0.1"; sha256="1jz0nnjx0sidxgvqfsmps3h4g4f73fpks37r6v11da0dmkcb1biz"; depends=[aftgee icenReg survival]; }; maboost = derive2 { name="maboost"; version="1.0-0"; sha256="18d36cgvn8p75nidfr6al458jbzwc1i7x77y1ks50y9phrz3wf65"; depends=[C50 rpart]; }; macc = derive2 { name="macc"; version="1.0.1"; sha256="1qj4mlikbqrxa6m46527xmxdbk7b3l95z6jdgpmi0ifywjiv52a4"; depends=[car lme4 MASS nlme optimx]; }; @@ -9875,13 +9889,13 @@ in with self; { mada = derive2 { name="mada"; version="0.5.9"; sha256="1l07dbgm9ghvqq9gh7g6yjfvxk0iq8xfyxz03j4nklbs10k3a0pz"; depends=[ellipse mvmeta mvtnorm]; }; maddison = derive2 { name="maddison"; version="0.1"; sha256="1ji51wnj0ybjd30b4bwn5npyswrmcfrbxcmdlngwzvca1knh8g1c"; depends=[]; }; maditr = derive2 { name="maditr"; version="0.6.3"; sha256="12ycnn384k0hsxlwk2pc3qhaz6rk71sr5qg6harpv3y6w84df8n1"; depends=[data_table magrittr]; }; - madness = derive2 { name="madness"; version="0.2.6"; sha256="1nk6kzjv0fgzbsp3crldq12id2k2wzm4bk9h9bnlkyrjf1hmfiaf"; depends=[expm Matrix matrixcalc]; }; + madness = derive2 { name="madness"; version="0.2.7"; sha256="0vcpydqnpmg9rvvzyjyqvd3qgs42n8cr9cafai51989v2w2bcf85"; depends=[expm Matrix matrixcalc]; }; madr = derive2 { name="madr"; version="1.0.0"; sha256="0lzg75kphz4a0w6n0jbsq87g72jvrbkyas4j813mryq2nv4lmsl4"; depends=[]; }; madrat = derive2 { name="madrat"; version="1.64.5"; sha256="1gccfpzbm5cq9q288k86mq0madh8x9nhw06hrrcfjj5waqhi30lj"; depends=[assertthat digest magclass rlang spam stringr]; }; mads = derive2 { name="mads"; version="0.1.5"; sha256="1ac34iff9hvl1bxk3gs5s3i311g9y59nd6v9jhvnfd6wfhck7krs"; depends=[mrds]; }; madsim = derive2 { name="madsim"; version="1.2.1"; sha256="11gfyimbz363p5xy1x6rsz5fcgzcr55myc5aaz5lazjkcnfn17aq"; depends=[]; }; mafs = derive2 { name="mafs"; version="0.0.3"; sha256="1apacrk8y5b5ids62vd1kn2k28bya9pydxxmdw2dhjyzkgrakdhn"; depends=[cmprsk colorspace CombMSC Epi etm forecast forecastHybrid fracdiff ggplot2 ggseas gtable munsell numDeriv plyr quadprog Rcpp scales tictoc tidyr timeDate tseries zoo]; }; - magclass = derive2 { name="magclass"; version="5.7.0"; sha256="0r4zkx90djh5nnv56icd2na0zsr7daig28gxkldcpj2c6l2n6526"; depends=[abind maptools reshape2 sp]; }; + magclass = derive2 { name="magclass"; version="5.7.3"; sha256="072hcp9m80c1r2vdhk6xp9gpbmiljpslalzh1i9hh7h7hgvp0bj7"; depends=[abind maptools reshape2 sp]; }; magic = derive2 { name="magic"; version="1.5-9"; sha256="0snmdh6vk0p6ar1swsihisinxrx7l8371dri5lk0z24ysgr5w7gs"; depends=[abind]; }; magicLamp = derive2 { name="magicLamp"; version="0.1.0"; sha256="1nfcnbqd6vawz8l3vgkbhmm462xdvaa4pn6axzmz8hl05xv2k3cv"; depends=[httr tibble]; }; magicaxis = derive2 { name="magicaxis"; version="2.0.10"; sha256="053l455si22mddc5cgihhnpkmxr2anfqvbzsa89djjpw5ah2vg1x"; depends=[celestial mapproj MASS plotrix RColorBrewer sm]; }; @@ -9897,7 +9911,7 @@ in with self; { makeProject = derive2 { name="makeProject"; version="1.0"; sha256="09q8xa5j4s5spgzzr3y06l3xis93lqxlx0q66s2nczrhd8nrz3ca"; depends=[]; }; makedummies = derive2 { name="makedummies"; version="1.2.1"; sha256="062rvijhy2dybpgxzp44cg46bfyb8lp9yasv3mhskhf3yg717sqp"; depends=[tibble]; }; malani = derive2 { name="malani"; version="1.0"; sha256="1jps28gfkiysr356ackxf1my5xz6rpx3a2bv68pziy2614hrqbs9"; depends=[e1071]; }; - malariaAtlas = derive2 { name="malariaAtlas"; version="0.0.5"; sha256="1hz23b7yq8vq5ydj1xwazg1zkl4f4kykgy6qhh6v8mwk70yg4s1w"; depends=[curl dplyr ggplot2 gridExtra httr raster rgdal rlang sp stringi tidyr xml2]; }; + malariaAtlas = derive2 { name="malariaAtlas"; version="1.0.0"; sha256="0ibnsk8ibkcikkw8fiiyw2xiyy61bmrirlrv4l4ili4wna0h9w0q"; depends=[curl dplyr ggplot2 gridExtra httr raster rgdal rlang sp stringi tidyr xml2]; }; mallet = derive2 { name="mallet"; version="1.0"; sha256="06rksf5nvxp4sizgya7h4sb6fgw3yz212a01dqmc9p5a5wqi76x0"; depends=[rJava]; }; managelocalrepo = derive2 { name="managelocalrepo"; version="0.1.5"; sha256="180b7ikas1kb7phm4l2z1d8wi45wi0qyz2c8rl8ml3f71b4mlzgc"; depends=[assertthat stringr]; }; mandelbrot = derive2 { name="mandelbrot"; version="0.2.0"; sha256="04a288jj8h1a04r584a02wg9dm3c6zifhqwj964ybsvgb4m6g99s"; depends=[reshape2]; }; @@ -9905,43 +9919,43 @@ in with self; { mangoTraining = derive2 { name="mangoTraining"; version="1.0-7"; sha256="0lw46j44jhdcyh079a7zjmxcnv5c6qsfachinlwv3ild1gwggr3p"; depends=[]; }; manhattanly = derive2 { name="manhattanly"; version="0.2.0"; sha256="185fkakx4v35n4gmlpk2kfm2bm8p320q4khkw936m09zx3aqz398"; depends=[ggplot2 magrittr plotly]; }; manhplot = derive2 { name="manhplot"; version="1.1"; sha256="17yw10gpfp6bqmilb09v61jd2amz6cv1z38si4nqnhbvmac065qd"; depends=[ggplot2 ggrepel gridExtra reshape2]; }; - manifestoR = derive2 { name="manifestoR"; version="1.3.0"; sha256="1bxmlg6fmr4ky9m7b65rrylspwhwc8k9s1cbxnx9dyl33wh39ci6"; depends=[base64enc dplyr DT functional htmltools htmlwidgets httr jsonlite magrittr NLP psych tibble tm zoo]; }; manipulate = derive2 { name="manipulate"; version="1.0.1"; sha256="1klknqdfppi5lf6zbda3r2aqzsghabcsaxmvd3vw3cy3aa984zky"; depends=[]; }; - manipulateWidget = derive2 { name="manipulateWidget"; version="0.10.0"; sha256="1zagrbwkn2d50zzw8i2vyb1hsq4cydmfsqiy1a2qlp6zrv8a6q9x"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny webshot]; }; - manymodelr = derive2 { name="manymodelr"; version="0.2.2"; sha256="02jswli6k4m9662zf48maix28lr7w93rgwvzgm0nv1zf2mdrh6qb"; depends=[caret dplyr e1071 magrittr Metrics plyr purrr reshape2 tibble]; }; - maotai = derive2 { name="maotai"; version="0.1.2"; sha256="0j95q2b9719ffw4nbm0ziyprkj3p8s958xyqyrx202d1r9i0igs6"; depends=[Matrix mclust Rcpp RcppArmadillo Rdpack RSpectra shapes]; }; + manipulateWidget = derive2 { name="manipulateWidget"; version="0.10.1"; sha256="1vi71sjh7z1a880wffk8qqw7iysvk42q78giqxmm2sqz2a912qlx"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny webshot]; }; + manymodelr = derive2 { name="manymodelr"; version="0.2.4"; sha256="13d1lgz22wpvbn56m32w5m1w2gk2jz0p3m2130lmwain4nb9rsmk"; depends=[caret dplyr e1071 ggplot2 magrittr Metrics plyr purrr reshape2 tibble]; }; + maotai = derive2 { name="maotai"; version="0.1.3"; sha256="08fyyh9s60fbzhpp7b0zwxac9ssjjvwmi80v7181iwc2abazq4w2"; depends=[Matrix mclust Rcpp RcppArmadillo Rdpack RSpectra shapes]; }; mapReasy = derive2 { name="mapReasy"; version="1.0"; sha256="13va0z967ckwxnnianki5aj66km0x6r37nj4mz9qd3b0bps4g2kj"; depends=[Hmisc rgdal sp]; }; mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; }; mapcan = derive2 { name="mapcan"; version="0.0.1"; sha256="1a4135wc1h4nzcv6xq0bg75i744wyq8p7q0ix7y2x2gb6s35w46k"; depends=[dplyr ggplot2 magrittr]; }; mapdata = derive2 { name="mapdata"; version="2.3.0"; sha256="0xnxh73rgcq55zrw81a2bq8yd67bxc2rafp4shf6nyrqj04iip0y"; depends=[maps]; }; mapdeck = derive2 { name="mapdeck"; version="0.2.1"; sha256="1slj4yrw7qir3cz70yqawbsz521n4614h6gjn0qpj75rj12wnxlk"; depends=[BH colourvalues geojsonsf googlePolylines htmltools htmlwidgets jsonify magrittr rapidjsonr Rcpp shiny spatialwidget]; }; - mapedit = derive2 { name="mapedit"; version="0.5.0"; sha256="16rdksnkx6s7w92as896scfdnl1smp00fdnxmlz4ayym2a26wagb"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet leaflet_extras leafpm mapview miniUI sf shiny]; }; + mapedit = derive2 { name="mapedit"; version="0.6.0"; sha256="1ix0sjsqb6646xyi73am9ic97plw9y9p4pl8mrkpzvqzm0pxdhxx"; depends=[dplyr htmltools htmlwidgets jsonlite leafem leaflet leaflet_extras leafpm mapview miniUI raster scales sf shiny sp]; }; mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; }; mapi = derive2 { name="mapi"; version="1.0.1"; sha256="0qfwxrd0ya5amw7f96pfxf3f8m97s7vhaz62clqn083mw8ddaz2l"; depends=[data_table pbapply Rcpp sf]; }; mapmisc = derive2 { name="mapmisc"; version="1.7.7"; sha256="07hnfn0fnydckniyhixrsw7m22hmvzksqxlwcw2i0jb7qq3h3vqa"; depends=[raster sp]; }; mapplots = derive2 { name="mapplots"; version="1.5.1"; sha256="18s2y66f8vi8g2r8a25zbgp2xm079r8v8qxv0w71h8krycs6vs9p"; depends=[]; }; - mapproj = derive2 { name="mapproj"; version="1.2.6"; sha256="1rggww8cbwv0vzlj5afzhbsbngg4bzj5znbkz7wmxsbshfbsm9b2"; depends=[maps]; }; + mapproj = derive2 { name="mapproj"; version="1.2.7"; sha256="0nscsfq8md6ri9258xz57c3dj81wdl6kdwf4a9qcrwwbn20i427h"; depends=[maps]; }; mapr = derive2 { name="mapr"; version="0.4.0"; sha256="169ah9v7cpw3hmaj6n575gi1zwazf4vh59n46zghb1x68nc2gqs0"; depends=[data_table ggplot2 gistr jsonlite leaflet RColorBrewer rworldmap sp spocc]; }; maps = derive2 { name="maps"; version="3.3.0"; sha256="05i2ppl5z4p8rawgqmy3z4ia05fcblpq1vvrmrkgkkpdlhczx6hr"; depends=[]; }; mapsRinteractive = derive2 { name="mapsRinteractive"; version="1.0.0"; sha256="0lpmizhaan7zp201wjaq544wadizwpswch7sn6m3sjwn8rswg6av"; depends=[gstat raster rgdal rgeos sp]; }; mapsapi = derive2 { name="mapsapi"; version="0.4.2"; sha256="1l7sp65ghdcli6ajkvlnhfizjq16mw2cmlf8jbif3al1vhbv4dvw"; depends=[bitops magrittr plyr sf xml2]; }; maptools = derive2 { name="maptools"; version="0.9-9"; sha256="0v4llkxk8qs61vq4ykvaim4k23aagdaz0p62ns7zfq02sln3pfk9"; depends=[foreign lattice sp]; }; - maptpx = derive2 { name="maptpx"; version="1.9-2"; sha256="1i5djmjg0lsi7xlkbvn90njq1lbyi74zwc2nldisay4xsbgqg7fj"; depends=[slam]; }; maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; }; mapview = derive2 { name="mapview"; version="2.7.0"; sha256="1cqa7hw7h0n6ing87bq903ax2m4iw82xb2jdgl55z9v9rdhxp0xh"; depends=[base64enc brew htmltools htmlwidgets lattice leafem leaflet leafpop png raster Rcpp satellite scales sf sp svglite uuid viridisLite webshot]; }; mar1s = derive2 { name="mar1s"; version="2.1.1"; sha256="1ljkvgxrramfx1rnp2rg6516mjxaa6s96amrnmqymnyjz7wlf37l"; depends=[cmrutils fda zoo]; }; march = derive2 { name="march"; version="3.1"; sha256="1y3ndnkxrqxavp7b5dwhn1mijhhn06k5b6iickzjr4bfmpfnk340"; depends=[]; }; marcher = derive2 { name="marcher"; version="0.0-2"; sha256="0hcxbfrwniih4kvx5sxhlffz1pc87kf52v8hvaf193rhhdykis5q"; depends=[magrittr Matrix minpack_lm mvtnorm numDeriv plyr RColorBrewer scales zoo]; }; - marelac = derive2 { name="marelac"; version="2.1.9"; sha256="07xhlsdzz2j5smh3v4hpm8zp4ljg9aa3i67j65hs1cq27q1jg1n7"; depends=[seacarb shape]; }; + marelac = derive2 { name="marelac"; version="2.1.10"; sha256="08phsghzvi0z78pkb5lkamni83fsw0bqfri99j6bjf6y14aygif9"; depends=[seacarb shape]; }; marg = derive2 { name="marg"; version="1.2-2.1"; sha256="1r6rl7dhvm8dghm7pm4hfw3924qja65hczl6d47v9ixnv4rxyzr9"; depends=[statmod survival]; }; margins = derive2 { name="margins"; version="0.3.23"; sha256="1gn18bmz7zwdv5fm62g4kj1x0y4lzhwvwgk4xc9hfi2mh5w08j4f"; depends=[data_table MASS prediction]; }; marima = derive2 { name="marima"; version="2.2"; sha256="03nvh93r4052li84yjqzc106gwh1542q9s192s980gs6sgy8scm6"; depends=[]; }; marindicators = derive2 { name="marindicators"; version="1.0.0"; sha256="1id055jc624n34vxb68gdy2kgfsm5y61dkfskzhlrwq9d5npxv6m"; depends=[]; }; markdown = derive2 { name="markdown"; version="1.1"; sha256="06zwbrp14bri3470anadd7dvgmw06xf8df6v2pk64wx3f9sd934d"; depends=[mime xfun]; }; + markdownInput = derive2 { name="markdownInput"; version="0.1.2"; sha256="1qxil2liikbbn6w8niyc03fwqvwvdv6wiy98ip8j77729i7g2hln"; depends=[markdown shiny shinyAce]; }; marked = derive2 { name="marked"; version="1.2.6"; sha256="0k367sjyac1w894rndz5m0drmbd56nzyx5mr7mvhsqzq3gnv4dw5"; depends=[bookdown coda data_table expm kableExtra knitr lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; + marketr = derive2 { name="marketr"; version="0.0.1"; sha256="0pchyfhim18m88r9m9dhihj89isvjwgmka9bdi64n0hnmv0qv8ds"; depends=[dplyr magrittr rlang tibble tidyr]; }; markmyassignment = derive2 { name="markmyassignment"; version="0.8.2"; sha256="1jrx72k3glwv5nci3h3qbqbs0x9mqld92v4irw2sfjzcmb7qyma3"; depends=[checkmate codetools httr lazyeval rlang testthat yaml]; }; markophylo = derive2 { name="markophylo"; version="1.0.7"; sha256="09rg5rwm0dm881fpm9yzygd6d3dyrxjsrvl0yhfpkzbpdihfympn"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; }; - markovchain = derive2 { name="markovchain"; version="0.8.2"; sha256="1dqkrwk9xmclwzk76lqj9s87jchvfcnmqi9rfjha6lyr5hy7c79g"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; + markovchain = derive2 { name="markovchain"; version="0.8.4"; sha256="154prv8bwx9a9956l3vkph60j8cg49q78q217qfqh2j2v7h7rfb9"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; marl = derive2 { name="marl"; version="1.0"; sha256="0rndnf3rbcibv3gsrw1kfp5zhg37cw9wwlz0b7dbwprd0m71l3pm"; depends=[]; }; marmap = derive2 { name="marmap"; version="1.0.3"; sha256="0hjy58kk2kg7v2nq7kfw5rdcrpfhikwr30lz71pfgis34833i7yy"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; marqLevAlg = derive2 { name="marqLevAlg"; version="2.0.1"; sha256="0lcr5bn101krgqwjnbk9r3xizwwxnsgyi84hg95jpb5f2sa2bpg8"; depends=[doParallel foreach]; }; @@ -9949,12 +9963,12 @@ in with self; { mason = derive2 { name="mason"; version="0.2.6"; sha256="01ppc7f18kf4xv4lrhib0cfm85v658grmxpny3h3kdb4pi4rbspy"; depends=[broom dplyr lazyeval magrittr tidyr]; }; mastif = derive2 { name="mastif"; version="1.0"; sha256="1xxfql4d298ib9h8821jp717a60vgxq7nzs08yb3xyzp0c3djja2"; depends=[corrplot RANN Rcpp RcppArmadillo repmis xtable]; }; matR = derive2 { name="matR"; version="0.9.1"; sha256="1qw2vqmpq7gc3dmr9r000ccjj7xa0h82waxnvryz3l17ggryyjjm"; depends=[BIOM_utils MGRASTer]; }; - matahari = derive2 { name="matahari"; version="0.1.2"; sha256="1bn30c2xf9vw0p4jnw3mjjlr6f5nsib0ffb8736n2v4rrifgxqsg"; depends=[clipr jsonlite purrr readr rlang rstudioapi tibble]; }; + matahari = derive2 { name="matahari"; version="0.1.3"; sha256="03mhn4qh1vcz2hr0mxp6gijwgrzvbpfb8dq7lqhchbk5gq5g3fnh"; depends=[clipr jsonlite purrr readr rlang rstudioapi tibble]; }; matchMulti = derive2 { name="matchMulti"; version="1.1.7"; sha256="0k5psmjzcyr7pm603vni7w2hvslck05r81cngm26pql2prdrv5yk"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; }; matchbook = derive2 { name="matchbook"; version="1.0.7"; sha256="0xfqg8z2zkn215kqmjjkqdwrgsk7cn4jdpxfgd6razhcbvflg48j"; depends=[]; }; matchingMarkets = derive2 { name="matchingMarkets"; version="1.0-2"; sha256="1jj5hzxiivqinkpddmkqdxgi83jm6blann9wgv4g8prn3lvp0i85"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; matchingR = derive2 { name="matchingR"; version="1.3.0"; sha256="1rpw5a52alh5diiqr7f87vhpgp3w3f8lg8wkaqvr5idid9fkll1i"; depends=[Rcpp RcppArmadillo]; }; - matchmaker = derive2 { name="matchmaker"; version="0.1.0"; sha256="162zyvnz80rivy99na1hwp0drq913gvp1gs2jiaficpv4xlxl6ia"; depends=[cli forcats rlang]; }; + matchmaker = derive2 { name="matchmaker"; version="0.1.1"; sha256="1sa2cah8gjvg0159rv1sfw9p0aljg66xmij31mz2vfk5683r4b00"; depends=[cli forcats rlang]; }; matconv = derive2 { name="matconv"; version="0.4.0"; sha256="0kl0647m45mrk13fyr0mkx1x9v3im66ciky8k8nmy4ahkffyasi4"; depends=[]; }; mateable = derive2 { name="mateable"; version="0.3.1"; sha256="1ka9xxicibpfg6k3njq5f5576jwj734r1mb46a2cmiyq676ks7pp"; depends=[FNN Rcpp sn]; }; mathgraph = derive2 { name="mathgraph"; version="0.9-14"; sha256="11wcnjligjc0m0ibi7v5f9w4j2g0fmw33za8407d9fqdb0i5pf60"; depends=[]; }; @@ -9964,17 +9978,18 @@ in with self; { matlabr = derive2 { name="matlabr"; version="1.5.2"; sha256="1ba6cajnzldb1gmn7rf0b198h6mdh58r3frm0z0cmvbinspwz3x7"; depends=[stringr]; }; matlib = derive2 { name="matlib"; version="0.9.2"; sha256="09afscydrn5bk91qb26r8w7f33nhxp1ih4h55y6adcw7p6hjrw27"; depends=[car MASS rgl xtable]; }; matpow = derive2 { name="matpow"; version="0.1.1"; sha256="1a6q21ba16qfdpykmjwgmrb1kkvvyx48qg8cbgpdmch0vhibcgcp"; depends=[]; }; + matricks = derive2 { name="matricks"; version="0.8.2"; sha256="0ik61jxd4hpw149dbbmis3wsfsim60mw9d0qjwh047qfg6sm1vsc"; depends=[ggplot2 Rcpp reshape2 rlang]; }; matrixLaplacian = derive2 { name="matrixLaplacian"; version="1.0"; sha256="1ixqdv3sz3sc79wn3vqhlq79j7x7cvl878m5hgvbcg6klfvlmmci"; depends=[scatterplot3d]; }; matrixNormal = derive2 { name="matrixNormal"; version="0.0.1"; sha256="1nvsgcp8x691pa2rjz2fgknybwpni6fppm16l5bjkrg47ka0pbcd"; depends=[mvtnorm]; }; matrixProfile = derive2 { name="matrixProfile"; version="0.5.0"; sha256="0nd54k878xf7hzwxawh03c3na4jfvb68afarkwrmmffjlp3i8a9g"; depends=[fftw signal TTR zoo]; }; - matrixStats = derive2 { name="matrixStats"; version="0.55.0"; sha256="06fvx0rlaz80k0lkqq2n7v0309xpz7h7ss0m9kgyikp4xs8bvmhn"; depends=[]; }; + matrixStats = derive2 { name="matrixStats"; version="0.56.0"; sha256="09qgfv9x32x6ncgf19iy7yjp26fwy6p5wm8spc2xzfc0qhylmqrr"; depends=[]; }; matrixStrucTest = derive2 { name="matrixStrucTest"; version="1.0.0"; sha256="06la9xmpi1viyjml4m1akbna3lwkz5lnq95v1nnf73i9zpfwz03k"; depends=[]; }; matrixTests = derive2 { name="matrixTests"; version="0.1.8"; sha256="18f0nklhq5xsh8dwqqz2kdq5csyxc8jdx3r0d1hcm27l3l48h56s"; depends=[matrixStats]; }; matrixcalc = derive2 { name="matrixcalc"; version="1.0-3"; sha256="1c4w9dhi5w98qj1wwh9bbpnfk39rhiwjbanalr8bi5nmxkpcmrhp"; depends=[]; }; - matrixpls = derive2 { name="matrixpls"; version="1.0.5"; sha256="04sshb88rq2mp3y4rrs6nkzr4kc380vx380r911c7j975l55a183"; depends=[assertive lavaan MASS matrixcalc psych]; }; + matrixpls = derive2 { name="matrixpls"; version="1.0.9"; sha256="13wsd0kbn77mjd5rkfdv9di8pxg898adrgdpqcyridvikjhqlh0j"; depends=[assertive lavaan MASS matrixcalc psych]; }; matrixsampling = derive2 { name="matrixsampling"; version="2.0.0"; sha256="05dbn7rj07jx1hj7i6k3akf11hysxg6v32kav9fvsqmiy2zkippa"; depends=[keep]; }; matsbyname = derive2 { name="matsbyname"; version="0.4.11"; sha256="0v236k0wsj1i92fmh1jikh7qwq7gxsi7dc7kamls611p48wk9082"; depends=[dplyr Hmisc magrittr]; }; - matsindf = derive2 { name="matsindf"; version="0.3.2"; sha256="1jjfsavhmhjicvccfzh3j1a1ayfhvp81d6fybq660b076ya1hkrr"; depends=[dplyr magrittr matsbyname purrr rlang rlist tibble tidyr]; }; + matsindf = derive2 { name="matsindf"; version="0.3.3"; sha256="1jdqxgy7xpsrwsgaf6z8i98125r3nhl30w7crvx1pmnpp4c3pr9b"; depends=[dplyr magrittr matsbyname purrr rlang rlist tibble tidyr]; }; mau = derive2 { name="mau"; version="0.1.2"; sha256="1wgiai8f1kbjh9hfwv4m0kavd44ib5xb33p8m16zpawnw14m7sj5"; depends=[data_table ggplot2 gtools igraph RColorBrewer Rdpack stringr]; }; mauricer = derive2 { name="mauricer"; version="2.0.5"; sha256="01x1cigwr95hzyz1pm9w5xi2j9z4zf54p6bwhn0y865gln80wvnz"; depends=[beastier stringr]; }; maxLik = derive2 { name="maxLik"; version="1.3-8"; sha256="1rfzd2n7ak69pbnnzbvd0c4kk9h812sq1f17hamnqx77pw84sh1k"; depends=[miscTools sandwich]; }; @@ -9984,17 +9999,18 @@ in with self; { maxlike = derive2 { name="maxlike"; version="0.1-8"; sha256="0lbj212dbx8lbkw808xlhniw5864bh86xs8zwvxcnngj0abapalh"; depends=[raster]; }; maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; }; maxnet = derive2 { name="maxnet"; version="0.1.2"; sha256="1rfcylbv068pz4jgry5ijszwf5fibz566s5iv0ar8dhv0fhjr86z"; depends=[glmnet]; }; + maxnodf = derive2 { name="maxnodf"; version="1.0.0"; sha256="1czhy3177bb4a5rxi2s4j3c9xn9f0b2pbkdka1dzw6ga389wdwb3"; depends=[Rcpp]; }; maxstat = derive2 { name="maxstat"; version="0.7-25"; sha256="114z1rwxwvk05ijjhdppzm148n1h192fp0w12ky10zkrhf6kphbg"; depends=[exactRankTests mvtnorm]; }; mazeGen = derive2 { name="mazeGen"; version="0.1.3"; sha256="192xygg3l4rpqp49sgd5hpp4h3f8wjhyldn0l8abxhsks7jd2kfb"; depends=[igraph]; }; mazealls = derive2 { name="mazealls"; version="0.2.0"; sha256="14j6syw1zkgs4cnmxzqpm6klmgvck2gg97wkzmy9al6n0biy8gmb"; depends=[TurtleGraphics]; }; mazeinda = derive2 { name="mazeinda"; version="0.0.1"; sha256="0ns4ib73y4fghf7p1wg0a05js4mqr66dpp49p1h039pqrb0f1vwd"; depends=[foreach]; }; mbbefd = derive2 { name="mbbefd"; version="0.8.8.5"; sha256="1bnbavhii2wm9944l4j5x21y9b3kp0sdshz32r1k7cy1y569zd6r"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; mbclusterwise = derive2 { name="mbclusterwise"; version="1.0"; sha256="1ilqaxcxf1k3ck910s0xqwnp88w8ag5rn1dpvaa1i7jlcldsbnhp"; depends=[ade4 doParallel foreach kknn]; }; - mbend = derive2 { name="mbend"; version="1.2.3"; sha256="0w1rrj1zcbvi8nlspzqa8142ilvbw9q6m26kmxqcp9mvqzbnbd30"; depends=[]; }; + mbend = derive2 { name="mbend"; version="1.2.5"; sha256="0p9clxfrrj0j58splarb8ljvini1gi7mmn2fqay7w4hc5l8rhh6d"; depends=[]; }; mbest = derive2 { name="mbest"; version="0.6"; sha256="1x0f7y5hj6a35wq1xn6g7jyjn9c4zryahwlf07qrypgrcnj2m8vx"; depends=[abind bigmemory foreach lme4 logging nlme]; }; mbir = derive2 { name="mbir"; version="1.3.5"; sha256="10sd5gk2k94cmi49nbpywqvh9bxj9q3psa3d00zmw1a7d6c0jjpd"; depends=[effsize psych]; }; mblm = derive2 { name="mblm"; version="0.12.1"; sha256="1fipb3bryaimr30lcxsxrn0ymv24z39swca7s4z7p9xcfg3ban1b"; depends=[]; }; - mboost = derive2 { name="mboost"; version="2.9-1"; sha256="02ia3y0fxfjl02fb1nnl93j640fyl18jm15cgxyybhf27w4jdvb7"; depends=[lattice Matrix nnls partykit quadprog stabs survival]; }; + mboost = derive2 { name="mboost"; version="2.9-2"; sha256="1ajlspdkh7zj9jhjhz7zsllv3dzwpx272ksrk91gzidda4hbmiil"; depends=[lattice Matrix nnls partykit quadprog stabs survival]; }; mboxr = derive2 { name="mboxr"; version="0.2.0"; sha256="1d11fpz17k65dzw9sjc7zfs1jpajzrh2pvr2s435p83g3mpf40vz"; depends=[dplyr lubridate magrittr purrr reticulate stringr tibble tidyr]; }; mbrglm = derive2 { name="mbrglm"; version="0.0.1"; sha256="0yxq1xk8qy5hpiqqldyrs78lp4ggdp5lj2lmh8rqq1xvsfr6nrh4"; depends=[enrichwith nleqslv]; }; mbsts = derive2 { name="mbsts"; version="1.0"; sha256="0wkglh1g0kdlgw4afqxvwb26difnqhf6g5jsbf8y39mpipxla365"; depends=[KFAS MASS Matrix MCMCpack pscl]; }; @@ -10004,7 +10020,7 @@ in with self; { mcGlobaloptim = derive2 { name="mcGlobaloptim"; version="0.1"; sha256="1p8841y9a4yq51prv6iirgw9ln8jznx8nk547sc5xlznksjy1g9n"; depends=[randtoolbox snow]; }; mcMST = derive2 { name="mcMST"; version="1.0.1"; sha256="18ka76g9pgpycaw0hl8vxpabd8584q1l5d3xmrzy1zwincsg7vgs"; depends=[BBmisc checkmate ecr ggplot2 gtools lhs parallelMap reshape2 vegan]; }; mcPAFit = derive2 { name="mcPAFit"; version="0.1.4"; sha256="1h5kiry8bvdrgyqf7cqsag0b7rscwc7phayzf6h4css1667bvm0g"; depends=[PAFit RColorBrewer Rcpp]; }; - mcStats = derive2 { name="mcStats"; version="0.1.1"; sha256="1jc9mzk97d8fcbn6rh6prgwbdir2hzjfxm0ydw75h6mkgiqchcz0"; depends=[dplyr ggplot2 ggthemes gridExtra magrittr rlang tidyr]; }; + mcStats = derive2 { name="mcStats"; version="0.1.2"; sha256="1r8dxdfcvznl2968xr6fbany1rh7wq5z1p7fhdf5g4b5l28j8pf9"; depends=[dplyr ggplot2 ggthemes gridExtra magrittr rlang tidyr]; }; mcbiopi = derive2 { name="mcbiopi"; version="1.1.6"; sha256="1caw2sy15hw2zw0bdynwnsa7hn4rly34hlxp06nwm5lssz8l2597"; depends=[]; }; mcc = derive2 { name="mcc"; version="1.0"; sha256="0p661a870bvh3xhcahqqq85azn9rjl3vacjy96jsdn86irj4s0vi"; depends=[]; }; mcca = derive2 { name="mcca"; version="0.7.0"; sha256="01nm0plgkik241qhd06v1vs84lf7agc0vkxa27cpr5qlfl4cm4zb"; depends=[caret e1071 MASS nnet pROC rgl rpart]; }; @@ -10012,7 +10028,7 @@ in with self; { mcclust = derive2 { name="mcclust"; version="1.0"; sha256="00qprmsjwbn2d0jl7p9mz8pv7k8ld3mzk862pr1grigk0lqwhx06"; depends=[lpSolve]; }; mccmeiv = derive2 { name="mccmeiv"; version="2.1"; sha256="1lkghvvwxvg474p37h1mpbackr5qmy05qkx8yiq4x066wrfq1w1i"; depends=[MASS numDeriv survival]; }; mccr = derive2 { name="mccr"; version="0.4.4"; sha256="1scqds1yx317qmjappy2h1m564dcmsqqfpdm8pm3plalag16xrhj"; depends=[]; }; - mcemGLM = derive2 { name="mcemGLM"; version="1.1"; sha256="07ky3bvcns24qia9pyvf5lp7764h8gn2g8zr304iz4x9bq6jvsi0"; depends=[Rcpp RcppArmadillo trust]; }; + mcemGLM = derive2 { name="mcemGLM"; version="1.1.1"; sha256="0p6z32c69ik8wjjn50vzjmr4plsfbxr2p0hr50wknkwwb7i20hp6"; depends=[Rcpp RcppArmadillo trust]; }; mcen = derive2 { name="mcen"; version="1.0"; sha256="0dgic137n3qvxljj3f7j3kq3x2rkblxzg55hjbknspwp0i7i4lx8"; depends=[faraway flexclust glmnet Matrix]; }; mcga = derive2 { name="mcga"; version="3.0.3"; sha256="109m01mab5awjf8zjzwl9j7hzac15dyq3x6zba9hsy5i02k5d5w4"; depends=[GA Rcpp]; }; mcgfa = derive2 { name="mcgfa"; version="2.2.1"; sha256="19z5008274pwlwv47imixnfd4nxwnrhdhsq2m3grjzndxp41i4xz"; depends=[]; }; @@ -10024,24 +10040,27 @@ in with self; { mclogit = derive2 { name="mclogit"; version="0.6.1"; sha256="1flq3g5jbp8nnx066wz35bg8wzlnnp9jp731w87vba483amakcds"; depends=[Matrix memisc]; }; mclust = derive2 { name="mclust"; version="5.4.5"; sha256="0whandnda1fnjn5k3hgxdbp3b0xr7nlzy1j37saqb536h8q9dwkm"; depends=[]; }; mclustcomp = derive2 { name="mclustcomp"; version="0.3.1"; sha256="0jdfdmgd46w7b38nbpd0lj9vqzi2nnf8fv0crj08lfin5ng7jvaa"; depends=[Rcpp RcppArmadillo Rdpack]; }; - mcmc = derive2 { name="mcmc"; version="0.9-6"; sha256="1fc6a6asn53lx7x7pnlb5mb716nv4pcmbp99f1i30y4hzygihfj4"; depends=[]; }; - mcmcabn = derive2 { name="mcmcabn"; version="0.2"; sha256="0mn12dkag1wlr0sdzfxxl1hkwkkwl9p2c4imnm4nzhw510zaa4fj"; depends=[abn coda cowplot ggplot2 ggpubr gRbase]; }; + mcmc = derive2 { name="mcmc"; version="0.9-6.1"; sha256="1i1nhdapyijvm58zx38q28zk01ndmi6smjivxk5xs2cx9b6v2av9"; depends=[]; }; + mcmcabn = derive2 { name="mcmcabn"; version="0.3"; sha256="0p4g7bnaq87kgfhsc3a8wdifngs4lb5il5wy9im81gz30ji9gbn7"; depends=[abn coda cowplot ggplot2 ggpubr gRbase]; }; mcmcderive = derive2 { name="mcmcderive"; version="0.0.1"; sha256="12asjw8rnnr7249fb7z7mp5w8y5vb0zig93jzsf77gghhfjmp4dl"; depends=[abind checkr err mcmcr purrr]; }; mcmcplots = derive2 { name="mcmcplots"; version="0.4.3"; sha256="0187z79gmvcrwqybxh3ckhcrqi0nqhvcvlczgxfkpq95y5czprdq"; depends=[coda colorspace denstrip sfsmisc]; }; mcmcr = derive2 { name="mcmcr"; version="0.2.0"; sha256="0jiyr0ncwhkgvkq4jb27iv1pxra9jbrjkv57lla71afr6glisqp2"; depends=[abind checkr coda err]; }; - mcmcse = derive2 { name="mcmcse"; version="1.3-2"; sha256="0yz0zhqhsxxg1b0cf15ijxfj4q8csjng18bmq45anabllq16ymkj"; depends=[ellipse Rcpp RcppArmadillo]; }; + mcmcse = derive2 { name="mcmcse"; version="1.4-1"; sha256="05sxz2bjb1y389vrmykcn6hwhgpykzpnh94aq34mbpqdsrb1y63b"; depends=[ellipse Rcpp RcppArmadillo]; }; mco = derive2 { name="mco"; version="1.0-15.1"; sha256="14y10zprpiflqsv5c979fsc2brgxay69kcwm7y7s3gziq74fn4rw"; depends=[]; }; - mcompanion = derive2 { name="mcompanion"; version="0.5-1"; sha256="11drfgy0knixhwjsywcr95b0isfmqkx9ygxq4phdnz839m2bki30"; depends=[gbutils MASS Matrix Rdpack]; }; + mcompanion = derive2 { name="mcompanion"; version="0.5-3"; sha256="0051agyzbhrsxi9wpfpqcq98h7y25627s2czf30qxcq80m7xbhj0"; depends=[gbutils MASS Matrix Rdpack]; }; mcp = derive2 { name="mcp"; version="0.2.0"; sha256="19bckg1wzv6k2j57s38rpjqrimj34lzaa3f0izxz36sahavyy2vj"; depends=[bayesplot coda dplyr future future_apply ggplot2 loo magrittr patchwork purrr rjags rlang stringr tibble tidybayes tidyr tidyselect]; }; mcparallelDo = derive2 { name="mcparallelDo"; version="1.1.0"; sha256="1ivh0d4f7ks6xwcjywk62h1zhr7h5bbhzpisky7973wi4g8vipbn"; depends=[checkmate R_utils R6]; }; mcprofile = derive2 { name="mcprofile"; version="0.2-3"; sha256="0rakaa1p6z0p4jl4df357vi58wzph81ik6plc8zzl370r8mj1y8q"; depends=[ggplot2 mvtnorm quadprog]; }; mcr = derive2 { name="mcr"; version="1.2.1"; sha256="0237w41xichd418ax9xviq4wxbcc6c0cgr5gvzkca67nnqgc4jaz"; depends=[]; }; mcsm = derive2 { name="mcsm"; version="1.0"; sha256="13sx7s3ywis5n4a70ld2szld9fb8jkfsc82dy6iskhy17vy8pml0"; depends=[coda MASS]; }; mctest = derive2 { name="mctest"; version="1.2.5"; sha256="1brqa8rvb5jvwmjz4wms7rhzv9xpvqydzkjm46ckz9fsiwrkq5mf"; depends=[]; }; + mcunit = derive2 { name="mcunit"; version="0.3.1"; sha256="12zlm14gcfid7h9szrggwmhy54d0wk57r8w8l3p3x3yp49144v67"; depends=[Rdpack rlang simctest testthat]; }; md = derive2 { name="md"; version="1.0.4"; sha256="13z8f3p84kivk6j58fb1qpzrmml41mq9pgv9nv2gvxrhyhanzi46"; depends=[]; }; md_log = derive2 { name="md.log"; version="0.1.1"; sha256="0ix5nz38xzlhrga40hfhlfss938mrfbni2wysvz2qbpm59qxrhg0"; depends=[futile_logger]; }; mda = derive2 { name="mda"; version="0.4-10"; sha256="19g6kn6g0shidrjfffklbmzc5w7mcimrxhagx4nmpslg59ibqdkh"; depends=[class]; }; - mdatools = derive2 { name="mdatools"; version="0.9.4"; sha256="1w3q3mzxbclzfllj277miap89161i6l1jf278iq07d0q9v0x7lnv"; depends=[]; }; + mdapack = derive2 { name="mdapack"; version="0.0.1"; sha256="1lz620nb51ih79djlma2hnasjr499dqkbvdn077n9pq14912z8q0"; depends=[covr curl devtools ggplot2 gh git2r httr knitr openssl pkgbuild reshape2 rlang rmarkdown roxygen2 spelling testthat]; }; + mdatools = derive2 { name="mdatools"; version="0.10.1"; sha256="0ki2y8p8w7cvmmckf9ymbwglhbfhqx21w3xwizn9msypif1kw55y"; depends=[]; }; + mde = derive2 { name="mde"; version="0.1.0"; sha256="129h28fhnfl4b0sm8q4ivaw0h5jhkglnkg8dzsvnis1gg2vn46hw"; depends=[dplyr magrittr purrr]; }; mded = derive2 { name="mded"; version="0.1-2"; sha256="1j8fcz5yc70p9qd9l010xj1b625scdps8z1pqh75b45p2hiqbhlc"; depends=[]; }; mdendro = derive2 { name="mdendro"; version="1.0.1"; sha256="0pk7b7zn9afc947parkj1qa4d85gq16lalg07fjfripxjnmvjahw"; depends=[rJava]; }; mdftracks = derive2 { name="mdftracks"; version="0.2.0"; sha256="0l8dc6ljrhbm8jwadaa3xkf6nx90vyiig15p7rryswczz9hw5ga6"; depends=[hellno]; }; @@ -10049,11 +10068,12 @@ in with self; { mdir_logrank = derive2 { name="mdir.logrank"; version="0.0.4"; sha256="0bhsr005dq9v85sjm2g9xlpksxwzsmsk14g0q5v3hkjvm5wk6xmv"; depends=[MASS]; }; mdmb = derive2 { name="mdmb"; version="1.3-18"; sha256="0jvwwdblky080j8cwfjna2d11z7hr672cdw9bkjz7ngd44blyp8x"; depends=[CDM coda miceadds Rcpp RcppArmadillo sirt]; }; mdpeer = derive2 { name="mdpeer"; version="1.0.1"; sha256="1vsqhah8h47s8k687fwa352549mdz16mwk1g7rcmhx75c2k85w2q"; depends=[boot ggplot2 glmnet magic nlme nloptr psych reshape2 rootSolve]; }; - mds = derive2 { name="mds"; version="0.3.0"; sha256="098ynvwra7ylli1pklmmfl9xnmiyd13iw5zd7g2xlqmg3rrphysg"; depends=[lubridate parsedate]; }; + mds = derive2 { name="mds"; version="0.3.1"; sha256="1zqd595c06b9mdy7iczx41p1xdm140161chmlpsj82mphjjinh88"; depends=[lubridate parsedate]; }; mdsOpt = derive2 { name="mdsOpt"; version="0.4-3"; sha256="0chk95n8gvj8jxvqq3bkdsw3hjaizcqd0x2lk32rkaq52lp3l9d8"; depends=[animation clusterSim plotrix smacof smds spdep symbolicDA]; }; mdscore = derive2 { name="mdscore"; version="0.1-3"; sha256="10cl5r6kd9chdik5v0q91x40xpw2cjvvyi220z4bvngpb0989x8j"; depends=[MASS]; }; mdsdt = derive2 { name="mdsdt"; version="1.2"; sha256="0nbzc54jac4wmfyrs821ycxh749cb1zfxcws0nbpk35rydqkc627"; depends=[ellipse mnormt polycor]; }; mdsr = derive2 { name="mdsr"; version="0.1.7"; sha256="1angy75nyhzwfhmb4axs14yl0jsxjaiqh5nz2jpmi5j890y32zda"; depends=[babynames DBI dbplyr downloader dplyr fs ggplot2 mosaic RMySQL]; }; + mdsstat = derive2 { name="mdsstat"; version="0.3.2"; sha256="1ff53ddvn9rla02a0g4hgp9c1grlwja05ans9gjk5ya2nwilpj2l"; depends=[lubridate mds]; }; mdw = derive2 { name="mdw"; version="2017.12-03"; sha256="054vssnypbik0yf6smicggnkrqf6kx8k21nbf5rminsh00sx39k1"; depends=[]; }; meaRtools = derive2 { name="meaRtools"; version="1.0.4"; sha256="1nxyvdq4670696mhg0svxxlvk9hnr8szai8b18pw6754kmw1bjvn"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; }; meanShiftR = derive2 { name="meanShiftR"; version="0.53"; sha256="1pla9hr9nbbnc3hcmk0ywfh6129zng5lp3dmjqb3cgdrmwkdrx9i"; depends=[]; }; @@ -10062,20 +10082,21 @@ in with self; { measurements = derive2 { name="measurements"; version="1.4.0"; sha256="1kihavs9vgxwqjm9z1zjjngkmcwfsv8dg7nn9nrv5r06k5hv8bz6"; depends=[]; }; measures = derive2 { name="measures"; version="0.2"; sha256="1pp6nz30fbsqsvznim9j4vvz3z57sq5r234807flxfy0w7knydbd"; depends=[]; }; meboot = derive2 { name="meboot"; version="1.4-7"; sha256="1i0h71aj49hyj889447s611gz668ys7xlr1i82b5nvaf6chfbfin"; depends=[dynlm nlme]; }; + mechkar = derive2 { name="mechkar"; version="1.14.6"; sha256="1yrxp0qkfr96sf8lprn33cjfjmpkhpw0wpbz7w2600a923zdhwqc"; depends=[car coxphw dplyr ggplot2 givitiR gmodels Hmisc InformationValue MASS pROC ResourceSelection rlang ROSE tibble writexl]; }; medExtractR = derive2 { name="medExtractR"; version="0.1"; sha256="08hzl5kk3jqs8vc53zrd1qj5g24dkpvwwvswqp57719c4ybi3ia3"; depends=[stringr]; }; mederrRank = derive2 { name="mederrRank"; version="0.0.8"; sha256="1fvvik3bhjm6c0mhi2ma915986k2nj3lr2839k5hfrr7dg3lw3f4"; depends=[BB numDeriv]; }; medfate = derive2 { name="medfate"; version="0.8.2"; sha256="0f86cpczzkpx8sy6krx970zy1fmsn93mjkm9mq00w2nw91kqjrh6"; depends=[ggplot2 GSIF meteoland Rcpp sp spdep]; }; medflex = derive2 { name="medflex"; version="0.6-6"; sha256="04cjqhyihxf1imbl9y9s58qpy6lmxsh2gwy4bras03hx52slzl5r"; depends=[boot car Matrix multcomp sandwich]; }; mediacloudr = derive2 { name="mediacloudr"; version="0.1.0"; sha256="1r11mpz44msla71lqw45r9s8z7rwvbnqi026l0ljx6crby183h0w"; depends=[httr jsonlite rvest xml2]; }; mediation = derive2 { name="mediation"; version="4.5.0"; sha256="0i88wvqqw8cmxmh9i78rqzp4s16zhf12dgl9fsk9bhw7hxhhc0i1"; depends=[boot Hmisc lme4 lpSolve MASS Matrix mvtnorm sandwich]; }; - medicalrisk = derive2 { name="medicalrisk"; version="1.2"; sha256="1zdxv3rj7768kbyxfvr9n0hp4z7y0sf3r7ssqv731hjjp656l6xp"; depends=[hash plyr reshape2]; }; + medicalrisk = derive2 { name="medicalrisk"; version="1.3"; sha256="12p3mjy6lphjajxz7is04cahp0598ip9ixfkdimvw1k8n5hs9mj0"; depends=[hash plyr reshape2]; }; medicare = derive2 { name="medicare"; version="0.2.1"; sha256="00a1gml2khzisdavnaip6ap4bw45b17nbl9cqb1mqrm4y0p9gm16"; depends=[]; }; meditate = derive2 { name="meditate"; version="0.1.3"; sha256="02mgnbxlvi73zpnghlcx89jvri8144cf0bzq0hrbhh2nq2c1sdjg"; depends=[audio checkmate deldir wesanderson]; }; meditations = derive2 { name="meditations"; version="1.0.1"; sha256="0wnx3zadpngfch0sb0ifqvsmzl613639f1yazwsgvhk29mycx4ss"; depends=[]; }; medmod = derive2 { name="medmod"; version="1.0.0"; sha256="1f7bzdcjnbz9izlfblxcaa85qxx8kzn62qgjd3qlb7jl7mdy5q54"; depends=[ggplot2 jmvcore lavaan R6]; }; meetupapi = derive2 { name="meetupapi"; version="0.1.0"; sha256="1iaxpfzgn478np9cjwz0zalfy1p7jwabnwpfv31svw052i8bs9yl"; depends=[dplyr httr magrittr purrr]; }; mefa = derive2 { name="mefa"; version="3.2-7"; sha256="1qrf6d3y38q7yy6bg3bxg7514d9paz1f8y6sr7lbksi30qn92fmj"; depends=[]; }; - mefa4 = derive2 { name="mefa4"; version="0.3-6"; sha256="0zl30ag3v7ywaw3i0mngwg6f75cmd29z8ivxqzm6lqzgapcjlw2m"; depends=[Matrix]; }; + mefa4 = derive2 { name="mefa4"; version="0.3-7"; sha256="0iq3n77gbl3zbplaqp1nwb72y9w797m938albx27727pkzyanxf1"; depends=[Matrix]; }; meifly = derive2 { name="meifly"; version="0.3"; sha256="1x3lhy7fmasss0rq60z5qp74ni32sahw62s8cnp2j431sp95pczc"; depends=[leaps MASS plyr]; }; mekko = derive2 { name="mekko"; version="0.1.0"; sha256="09y50k4r4mnx351a5zhkqg9s2xyl3d149dhmfy2z6hzm5yg2ajyi"; depends=[ggplot2]; }; meltt = derive2 { name="meltt"; version="0.4.0"; sha256="0m0r7in1s8vq2pvq7pxgwjfhqds8pwhcrn5hy0wa126s1y88v34x"; depends=[dplyr ggplot2 leaflet plyr Rcpp RcppArmadillo reticulate shiny shinyjs tibble tidyr]; }; @@ -10085,29 +10106,28 @@ in with self; { meme = derive2 { name="meme"; version="0.2.2"; sha256="1q78q8080vvqni8ncqp326pidfjfia0f2b6pis08m7fr1q1gcqca"; depends=[ggplot2 gridGraphics magick showtext sysfonts]; }; memery = derive2 { name="memery"; version="0.5.2"; sha256="1hr52g69lr2n84yczm8i8yxh7rys5nr8jk1hcmv548p5y79l8k9s"; depends=[Cairo colourpicker cowplot ggplot2 jpeg magrittr png purrr shiny shinyBS shinycssloaders showtext sysfonts]; }; memgene = derive2 { name="memgene"; version="1.0.1"; sha256="1x3vf2f1yh40xw5vqcjlrn07zn9zh3sx4kc9dijxzygd9crl5a29"; depends=[ade4 gdistance raster vegan]; }; - memisc = derive2 { name="memisc"; version="0.99.21"; sha256="0fbljiz6ifyfjkqk4nsxmnqafdklqsbzihnbdg4cwbr25dx83hyq"; depends=[data_table lattice MASS repr]; }; - memnet = derive2 { name="memnet"; version="0.1.0"; sha256="1lhpij3dm4whsawy6cxcfcwn9q881i8jbjpkrwvdsn63ibxrm55s"; depends=[BH igraph Rcpp]; }; + memisc = derive2 { name="memisc"; version="0.99.22"; sha256="0w1p7zcdrif692i40r5m06lykr2f0vhibrh5pwz7ndhbxlr1pk8x"; depends=[data_table lattice MASS repr]; }; memo = derive2 { name="memo"; version="1.0.1"; sha256="14nvqi1qsin45ksd0wp9cigjk1gghr4jijdqkaqh177dwa244r9j"; depends=[digest]; }; memochange = derive2 { name="memochange"; version="1.1.0"; sha256="1im6342by0pf1kmz8jps9d3y752k87bl02v5ddywbvh0idkdnba5"; depends=[forecast fracdiff longmemo LongMemoryTS sandwich strucchange urca]; }; memoise = derive2 { name="memoise"; version="1.1.0"; sha256="034qfc2xlh30x1q2vya239w34a3ir3y2fwnx2agbgbi6592zjxmj"; depends=[digest]; }; memor = derive2 { name="memor"; version="0.2"; sha256="10w2jw9ma7yds2d179l7bv4rzpggp3l04kvqnncii6yf5f4lj9cd"; depends=[knitr rmarkdown yaml]; }; memoria = derive2 { name="memoria"; version="1.0.0"; sha256="05nx6xkgf1mkn1ajjizwp66xhn7ddbvgdnmkdbcl4s7sq456vczw"; depends=[cowplot ggplot2 HH ranger stringr tidyr viridis viridisLite zoo]; }; - memuse = derive2 { name="memuse"; version="4.0-0"; sha256="1g63nssxrgqgzw8qjz8202qpwhps8fbck6pn77j2wsc82dm73y7v"; depends=[]; }; - merDeriv = derive2 { name="merDeriv"; version="0.1-7"; sha256="0zvsbpz8v8bw458rvafw4cm8dwxbnvakm01ry3bxvq34hzg8ffg6"; depends=[lavaan lme4 Matrix nonnest2 sandwich]; }; + memuse = derive2 { name="memuse"; version="4.1-0"; sha256="1bbjp8y0ji71956fbaxiil7ynq2nkmmgz7i9xps83m3bbp5d3mjq"; depends=[]; }; + merDeriv = derive2 { name="merDeriv"; version="0.1-9"; sha256="1zp9w79pm3n8673h3h7ic9zx6p5i0cd6kpmbyfs365flgvcbdmsg"; depends=[lavaan lme4 Matrix matrixcalc nonnest2 numDeriv sandwich]; }; merTools = derive2 { name="merTools"; version="0.5.0"; sha256="19qf3nn57hvd80x2l0m34w2jaky0jgsgc4nh0vdqjl8kpx4044cr"; depends=[abind arm blme broom dplyr foreach ggplot2 lme4 mvtnorm shiny]; }; mergeTrees = derive2 { name="mergeTrees"; version="0.1.3"; sha256="17aqgfd1ky5zq6i9s1djvdqjdd8lzkblf0cdw82i9mpzfhcz1fav"; depends=[Rcpp]; }; mergedblocks = derive2 { name="mergedblocks"; version="1.0.0"; sha256="0g209f9vr5gjgsljnb6i8jr48azv982dbfc1anggfip82qivicqn"; depends=[randomizeR]; }; merlin = derive2 { name="merlin"; version="0.0.2"; sha256="0r1hxbpqhih0nyya26hphymz4jrw88zfd3bypf1hwj5dsk60341f"; depends=[MASS randtoolbox statmod survival]; }; merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; }; messaging = derive2 { name="messaging"; version="0.1.0"; sha256="0q19cqp1zgh0yhk1ql0jqf414bhx6jwhkairq6wx2cmkli2g7k1y"; depends=[dplyr glue magrittr rlang stringr]; }; - metR = derive2 { name="metR"; version="0.5.0"; sha256="0dpbzyawswlvzydx54i4f75zv79qww1p5hk1p4pzjc7fmgx9ba57"; depends=[checkmate curl data_table digest dplyr fields Formula formula_tools ggplot2 gridExtra gtable lubridate maps maptools Matrix memoise plyr purrr RCurl scales sp stringr]; }; + metR = derive2 { name="metR"; version="0.6.0"; sha256="0z2s84i953l5wa0pa9zkspk4hjjgrd9j2ssn5ahgqriqg65w29q2"; depends=[checkmate data_table digest fields Formula formula_tools ggplot2 gtable lubridate memoise plyr purrr scales sp stringr]; }; metRology = derive2 { name="metRology"; version="0.9-28-1"; sha256="1syjwblyd18myxrs0hx4m91fgb6zs3r4g7w701j2f2pw6j9mvz0y"; depends=[MASS numDeriv robustbase]; }; metScanR = derive2 { name="metScanR"; version="1.2.3"; sha256="1v7zrxj3wspx6f5n5s75skcygbf3r85rn4p0z9iwbrbrgxwi4qgs"; depends=[geosphere leaflet matlab plyr RCurl]; }; - meta = derive2 { name="meta"; version="4.9-9"; sha256="1z475n7g6rawz07p6myqgg6cgz4rbsfgmn6phbfpz4hf7wx84g9q"; depends=[CompQuadForm lme4 metafor]; }; + meta = derive2 { name="meta"; version="4.11-0"; sha256="06miv0yjxqxabi9iff08hydzb6qjdahy3dswxgkdp5zybma6dva6"; depends=[CompQuadForm lme4 metafor]; }; meta4diag = derive2 { name="meta4diag"; version="2.0.8"; sha256="1ila8x9r1rdmlwfpzfx1zj5yx1m4yrbhyb74db4wqbh1dswn7zsm"; depends=[caTools shiny shinyBS sp]; }; metaBLUE = derive2 { name="metaBLUE"; version="1.0.0"; sha256="0ppn4bvr10z32pghmv4wjv86k6n5y5bkfxc6h5mvb556v6jnl6d8"; depends=[Matrix]; }; metaBMA = derive2 { name="metaBMA"; version="0.6.2"; sha256="0g2npgr9rqf0f9xqdp4wl3263shrp28j4i63j4fwd91xk9qmy8my"; depends=[BH bridgesampling coda LaplacesDemon logspline mvtnorm Rcpp RcppEigen rstan rstantools StanHeaders]; }; - metaDigitise = derive2 { name="metaDigitise"; version="1.0.0"; sha256="04hycv9dpy39l8fhql69mcn5w97f7sjxrhiz5vbpbawvfbkl0f0l"; depends=[magick purrr]; }; + metaDigitise = derive2 { name="metaDigitise"; version="1.0.1"; sha256="1cwvb6b4a1pfixbknbjjylsmpkccgi163h0kbf7zfjaqjg2y9mzh"; depends=[magick purrr]; }; metaLik = derive2 { name="metaLik"; version="0.43.0"; sha256="1li40pgd9z00nrph9njwn6wysb1i9dkpqzcp6fzds6asvcxlqqfl"; depends=[]; }; metaMA = derive2 { name="metaMA"; version="3.1.2"; sha256="1mjyz06q1kc8lhfixpym4ndpnisi1r849fj3da6riwfd6ab1v181"; depends=[limma SMVar]; }; metaMix = derive2 { name="metaMix"; version="0.3"; sha256="17qkwg9iz5v63ybyvqppbf044l0pi0ym5pw283174dlx8lfac60q"; depends=[data_table ggplot2 gtools Matrix Rmpi]; }; @@ -10127,15 +10147,15 @@ in with self; { metafor = derive2 { name="metafor"; version="2.1-0"; sha256="009x5w163g4pbak23i5xw3ipk5s9xljkdj9py5vir3vpxxazk267"; depends=[Matrix nlme]; }; metaforest = derive2 { name="metaforest"; version="0.1.3"; sha256="1q6m60cd7gl7y0gdjd10ky25hwv5jc4x5g5sr5w61xc3j2hnw8in"; depends=[data_table ggplot2 gtable metafor ranger]; }; metafuse = derive2 { name="metafuse"; version="2.0-1"; sha256="1zdw22f5kzvy2xr3c2csy873hcags60as567brc2sw17d0apfy8j"; depends=[evd glmnet MASS Matrix]; }; + metagam = derive2 { name="metagam"; version="0.1.0"; sha256="1mya00bvbxz3fg506s4km1193yamgzqqq8v6v286jcp19w4jr07s"; depends=[dplyr furrr ggplot2 knitr metafor metap purrr rlang stringr tibble tidyr viridis]; }; metagear = derive2 { name="metagear"; version="0.4"; sha256="0ww1j34600y99wyanj9ffg1019xqshb9c32wiqnsblyw8pq4va5f"; depends=[EBImage gWidgets gWidgetsRGtk2 hexView MASS Matrix metafor RCurl stringr]; }; metagen = derive2 { name="metagen"; version="1.0"; sha256="0jvbm22976aqvmfnjzs51n2w099yj5hpx6hd0pgvbia80jk7b9vk"; depends=[BatchExperiments BatchJobs BBmisc ggplot2 lhs MASS metafor ParamHelpers plyr]; }; - metaheur = derive2 { name="metaheur"; version="0.2.0"; sha256="1rr5mjx3v87alj7cl9hxldvhhbpkz1fzmymmkqv0hs65pny6gbqw"; depends=[doParallel foreach ggplot2 preprocomb reshape2]; }; metaheuristicOpt = derive2 { name="metaheuristicOpt"; version="2.0.0"; sha256="0ra4hl9l1jlzymj218m2i6xrxfacyx4aaln5pk7q4di2ks0nq11m"; depends=[]; }; - metamedian = derive2 { name="metamedian"; version="0.1.4"; sha256="00jzgf8zdcbgnz89g55lq9c6ybh3praa68b9wwj6sx63hnkicvgd"; depends=[estmeansd Hmisc metafor]; }; + metamedian = derive2 { name="metamedian"; version="0.1.5"; sha256="1v2nha2qc9vs2s9nfvbia033ppprkwxj5fadlrpy20fj2lr8z7z6"; depends=[estmeansd Hmisc metafor]; }; metamer = derive2 { name="metamer"; version="0.2.0"; sha256="0wdhr83mph9v7vb9mfhf7lcwmp0smz72sniass7kxcbj6j9hga4g"; depends=[FNN progress]; }; metamicrobiomeR = derive2 { name="metamicrobiomeR"; version="1.1"; sha256="16ymdhhr7h2785gfgrw7qi1fjvawiz599h42qi7l0v6djinbxlw2"; depends=[caret compositions dplyr foreign gamlss gdata ggplot2 gplots gridExtra httr jsonlite knitr lme4 lmerTest magrittr matrixStats meta mgcv plyr randomForest RColorBrewer RCurl repmis reshape2 rmarkdown tidyr zCompositions]; }; metamisc = derive2 { name="metamisc"; version="0.2.2"; sha256="0ll245a3f442n7jyjshcn87l725mgk132ri73kynrwh0z8g2r7i5"; depends=[ggplot2 lme4 metafor mvtnorm plyr pROC]; }; - metan = derive2 { name="metan"; version="1.2.1"; sha256="0bgyrza03fdjd8hannzc70hrmd2cn6cvs58kq4lmjds5vckk27w5"; depends=[ade4 cowplot dendextend dplyr FWDselect GGally ggforce ggplot2 ggrepel gplots lattice lme4 lmerTest magrittr progress rlang tibble tidyr tidyselect]; }; + metan = derive2 { name="metan"; version="1.4.0"; sha256="0wzq2r22yzi7cr2algxq4fgmz58hv8zhk03r3qzhdvvxrm66rd9q"; depends=[ade4 cowplot dendextend dplyr FWDselect GGally ggforce ggplot2 ggrepel lme4 lmerTest magrittr progress purrr rlang tibble tidyr tidyselect]; }; metansue = derive2 { name="metansue"; version="2.3"; sha256="18vy294862lfgxiw9cikai9svy3wpwk2bvz3vp20fcslg90mn3xp"; depends=[]; }; metap = derive2 { name="metap"; version="1.3"; sha256="1jmmmmjiklaxfl604hwqil193ydaghvd5jv8xsr4bx3pzn5i9kvz"; depends=[lattice mutoss Rdpack TFisher]; }; metaplot = derive2 { name="metaplot"; version="0.8.3"; sha256="1zw8bq2fy9m15dfc92ag0dz2k9dqrf5jbvfaycizcgsgaqd79s1c"; depends=[dplyr encode ggplot2 gridExtra gtable lattice magrittr rlang scales tidyr]; }; @@ -10145,6 +10165,7 @@ in with self; { metapro = derive2 { name="metapro"; version="1.5.8"; sha256="0ymbqzm317fiywzxaizddhvjzwp2wyx9y7zgbg4nrz11l3r2bp2n"; depends=[metap rSymPy]; }; metasens = derive2 { name="metasens"; version="0.4-0"; sha256="1rgb2b48lwvrg1f39dzg6d9jr1ya2p7la2jrc3zs3jks28arjr2x"; depends=[meta]; }; metatest = derive2 { name="metatest"; version="1.0-5"; sha256="1h3dcs1m7606b3a41yw2lak3lrqmsbpnx67qv24wvq003apz1sfd"; depends=[]; }; + metathis = derive2 { name="metathis"; version="1.0.2"; sha256="07aha4j401zlm6abfmq70vqc215bpsi5hqi50npz33rpb1m3r9rq"; depends=[htmltools knitr magrittr purrr]; }; metavcov = derive2 { name="metavcov"; version="1.1"; sha256="1x87knvypkfg0x223aiak7fy7zdlfn74crmvnqzhxf2vmxljnvnh"; depends=[corpcor]; }; metaviz = derive2 { name="metaviz"; version="0.3.0"; sha256="1ayz9za3zwmyna1hanzm83gb7vw3dclj3z4g35rk5dz6s4zgqsvm"; depends=[dplyr ggplot2 ggpubr gridExtra metafor nullabor RColorBrewer]; }; metawho = derive2 { name="metawho"; version="0.2.0"; sha256="1mflkrlnb1wk9vbbj621cy64s78q677d8fcnsi1ybh49k7sqmw20"; depends=[dplyr forestmodel magrittr metafor purrr rlang]; }; @@ -10156,12 +10177,11 @@ in with self; { meteor = derive2 { name="meteor"; version="0.3-4"; sha256="01009d9wpxybig4n82m48hqqg1k4x4shcjxfy8y0kk7cgfdb4naw"; depends=[Rcpp]; }; meteorits = derive2 { name="meteorits"; version="0.1.1"; sha256="1vk8pbhfc5mbkbpw7ml81gx9i8187xp3vx36pbyyhjbrpy6gqabx"; depends=[MASS pracma Rcpp RcppArmadillo]; }; methcon5 = derive2 { name="methcon5"; version="0.1.0"; sha256="08xsi6j65izxqcrlh37f2d7m3pwna1v6zvdv96mqylsjqgqmbk5x"; depends=[dplyr magrittr purrr rlang]; }; - metricTester = derive2 { name="metricTester"; version="1.3.6"; sha256="0m49sl42bf0rlkvg3sq87vgx3dv65pxvcm07gflx5wlr26x1r0s1"; depends=[ape doParallel dplyr foreach geiger MASS picante plotrix spacodiR vegan]; }; metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; }; metropolis = derive2 { name="metropolis"; version="0.1.5"; sha256="0nhkzy1miycqa2jqh9gh1l48n03nig99q19f46dm8qqci7a90vlp"; depends=[coda]; }; - mets = derive2 { name="mets"; version="1.2.6"; sha256="0vaqizmr27144dkh5mh095vih0p70j3ly9zwk5h0fklmn8bf2qhl"; depends=[lava mvtnorm numDeriv Rcpp RcppArmadillo survival timereg]; }; + mets = derive2 { name="mets"; version="1.2.7.1"; sha256="1b3bsxdwzl5rilnsga9cgzb7dafcfk2q39582rif34wim8xxzzv7"; depends=[lava mvtnorm numDeriv Rcpp RcppArmadillo survival timereg]; }; metsyn = derive2 { name="metsyn"; version="0.1.2"; sha256="0iwp0nz07yd33qd93fjblmvik1l1xkv6rkccn3054zs2bkrzjq4f"; depends=[foreach readr stringr tibble]; }; - mev = derive2 { name="mev"; version="1.13"; sha256="0mcjis66v9jzcdamagizvz5c58qpzqa9dzj0ypqfv1cl061d6c4j"; depends=[alabama boot evd nleqslv nloptr Rcpp RcppArmadillo TruncatedNormal]; }; + mev = derive2 { name="mev"; version="1.13.1"; sha256="1zbr5f8w56c9z0lp4ak47fxnnfrdm74liqcjvij0n4ajqs6glaak"; depends=[alabama boot evd nleqslv nloptr Rcpp RcppArmadillo TruncatedNormal]; }; mewAvg = derive2 { name="mewAvg"; version="0.3.0"; sha256="16gc78ccjffp9qgc7rs622jql54ij83ygvph3hz19wpk22m96glm"; depends=[]; }; mexhaz = derive2 { name="mexhaz"; version="1.7"; sha256="1z0516i7asyn3248xzvvc377slcy2zv6f9qalkd33r3dlc0js4s8"; depends=[lamW MASS numDeriv statmod survival]; }; mfGARCH = derive2 { name="mfGARCH"; version="0.1.9"; sha256="0vmxyjg2jj39dd1307d5jwz3033j8ldfqhysmmzl3i1b5ypfd5q5"; depends=[maxLik numDeriv Rcpp zoo]; }; @@ -10170,8 +10190,7 @@ in with self; { mfp = derive2 { name="mfp"; version="1.5.2"; sha256="1i90ggbyk2p1ym7xvbf4rhyl51kmfp6ibc1dnmphgw15wy56y97a"; depends=[survival]; }; mfx = derive2 { name="mfx"; version="1.2-2"; sha256="04pwp67i4sn4rf497pgy6qifwvrcmwyxn8x5sn96fy8qyrdzjfhj"; depends=[betareg lmtest MASS sandwich]; }; mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; }; - mgc = derive2 { name="mgc"; version="1.0.1"; sha256="0bdj890v2rinsddny8kwa48cgqh9qlzfd7k5s4i9mg40ajr0f291"; depends=[MASS SDMTools]; }; - mgcViz = derive2 { name="mgcViz"; version="0.1.4"; sha256="0gxxmnawvq88jljdszhjw85px4w0q73nmgyq61hlfvjd2k8lscc8"; depends=[gamm4 GGally ggplot2 gridExtra KernSmooth matrixStats mgcv miniUI plyr qgam rgl shiny viridis]; }; + mgcViz = derive2 { name="mgcViz"; version="0.1.6"; sha256="12isaqpbhdg2qhw76wj6hqi233dw3md061bbirkgzr5clrb8kxlk"; depends=[gamm4 GGally ggplot2 gridExtra KernSmooth matrixStats mgcv miniUI plyr qgam rgl shiny viridis]; }; mgcv = derive2 { name="mgcv"; version="1.8-31"; sha256="1if34mqsn9r7g0l82lxvvx0wjhi9paqdymyd73nschxcl1if8vbk"; depends=[Matrix nlme]; }; mglmn = derive2 { name="mglmn"; version="0.0.2"; sha256="1ijkmr85s4yya0hfwcyqqskbprnkcbq8sc9c889i0gy0543fgqz4"; depends=[mvabund snowfall]; }; mgm = derive2 { name="mgm"; version="1.2-7"; sha256="1s0m9xjq2d067ba2cx87q83nqmdza34vw9g0g0mqd8ap53rmqhas"; depends=[glmnet gtools Hmisc matrixcalc qgraph stringr]; }; @@ -10192,20 +10211,20 @@ in with self; { micEconAids = derive2 { name="micEconAids"; version="0.6-18"; sha256="0s2gkf6widdnxqqb1xjqdvji8vhdz5a4q05clbbbyq1h409q7qvl"; depends=[lmtest micEcon miscTools systemfit]; }; micEconCES = derive2 { name="micEconCES"; version="0.9-8"; sha256="06g6z8hf7y9d942w6gya0fd5aidzfjkx3280gjygdlwpv7nlpqzv"; depends=[car DEoptim micEcon minpack_lm miscTools systemfit]; }; micEconIndex = derive2 { name="micEconIndex"; version="0.1-6"; sha256="1ihly6qpyg1pms4nkvs6khxxqwr3fwg57i8pg0yhyy1apqxyj2xl"; depends=[miscTools]; }; - micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-6"; sha256="1n3pxapc90iz1w3plaqflayd0b1jqd65yw5nbbm9xz0ih132dby9"; depends=[MASS miscTools systemfit]; }; + micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-8"; sha256="183hg4iap97is8cdaqxmnj9z8yybvpfnhg2kf85nfy1nl7b30xl2"; depends=[MASS miscTools systemfit]; }; micar = derive2 { name="micar"; version="1.1.1"; sha256="09vpijva39fwpvdpfglwr3xmz469pnmz371ms7z5av6w2193ls5n"; depends=[httr jsonlite]; }; - mice = derive2 { name="mice"; version="3.7.0"; sha256="1wx1s1gc07iz63w4m8z0i1n5mc273f89grp5d3hfla7ypicjkasf"; depends=[broom dplyr lattice MASS mitml nnet Rcpp rlang rpart survival]; }; + mice = derive2 { name="mice"; version="3.8.0"; sha256="1ibybvigqkkla4xwhqs2w4m6c68alfcdsljx99nn4p92rzb1ig04"; depends=[broom dplyr lattice Rcpp tidyr]; }; miceFast = derive2 { name="miceFast"; version="0.5.1"; sha256="0n09l6y7jwcskv2lfynyzl614c7x84yyc52wqwyhnzvd8lzapp5d"; depends=[data_table Rcpp RcppArmadillo]; }; miceMNAR = derive2 { name="miceMNAR"; version="1.0.2"; sha256="1s607icaf3c25mn8xdi3zkzmm8m7qd9a6vjdlz5j7ig2gc9f2y2d"; depends=[GJRM mice mvtnorm pbivnorm sampleSelection]; }; - miceRanger = derive2 { name="miceRanger"; version="1.2.0"; sha256="1bjg7qmywls76cqcyz5pwg00cryk4hf495jbk5a6j3rq9ihdagkm"; depends=[corrplot crayon data_table DescTools FNN foreach ggplot2 ggpubr ranger]; }; - miceadds = derive2 { name="miceadds"; version="3.7-6"; sha256="1jpddrw7vrm4v7n01qg7kigaicljnnrhqfjwnm9hl13mc2r928cg"; depends=[mice mitools Rcpp RcppArmadillo]; }; + miceRanger = derive2 { name="miceRanger"; version="1.3.4"; sha256="06vs4vdqhp7r28lajx0886sx857xp342570yds6qahnsjhfn8qaa"; depends=[corrplot crayon data_table DescTools FNN foreach ggplot2 ggpubr ranger]; }; + miceadds = derive2 { name="miceadds"; version="3.8-9"; sha256="1n5blg3vbl9sknwp9y123m597cvp6l1c25fyxqdbamw7b8ymzncp"; depends=[mice mitools Rcpp RcppArmadillo]; }; micemd = derive2 { name="micemd"; version="1.6.0"; sha256="1n8kzdf2713dw9mbzvbwl0gknzi9amdqnabfw2wmb70gsvma3f48"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; michelRodange = derive2 { name="michelRodange"; version="1.0.0"; sha256="1pykqb9hmpvn77k0vhfh36iyhamz9h5kpswq3ql31h9nknfy3ixi"; depends=[magrittr]; }; micompr = derive2 { name="micompr"; version="1.1.0"; sha256="0qsxs35mmqx8hpszcb1z87xczh0vh0m0plqrj22af5mjjvif76n9"; depends=[]; }; microPop = derive2 { name="microPop"; version="1.5"; sha256="1gikp20n2b50fkybbg2hmlfjdcm0imjwygjsjnyv3wrjzypm2i78"; depends=[deSolve]; }; microbats = derive2 { name="microbats"; version="0.1-1"; sha256="1mahvblaiwg1xk2s34wd1ic8ddc9lh6g0azik2pd97bsf0krkyw8"; depends=[]; }; microbenchmark = derive2 { name="microbenchmark"; version="1.4-7"; sha256="1xl4m4yl4h2zcjiz8wsa7f3sh55qg2xr3sgpvz18rlix6b3173r6"; depends=[]; }; - microdemic = derive2 { name="microdemic"; version="0.4.0"; sha256="0i4pkrw02ad8ssvryndf7pxgk5wcyn4126yvl28fxk38249kvc9v"; depends=[crul data_table jsonlite tibble]; }; + microdemic = derive2 { name="microdemic"; version="0.5.0"; sha256="1i89vq3b7gq0pdh8hf92jzh0fyghhhxf8hmb72naz0vpl6xa301a"; depends=[crul data_table httpcode jsonlite tibble]; }; microhaplot = derive2 { name="microhaplot"; version="1.0.1"; sha256="0g15g7d19yz11nn2g0h8h2m8k1cvmpryz72pnalgv5yi58md5l5i"; depends=[dplyr DT ggiraph ggplot2 gtools magrittr scales shiny shinyBS shinyWidgets tidyr]; }; micromap = derive2 { name="micromap"; version="1.9.3"; sha256="1iciwy0kcg4qa0xc4gkqcilq33ac1s184vw13cbbkv0d1b5cgkgv"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; micromapST = derive2 { name="micromapST"; version="1.1.1"; sha256="15ch132x3wnpf7rmy25nah7iyfxfk90p7lvavqjhrnavhjsfxbxx"; depends=[labeling RColorBrewer stringr]; }; @@ -10223,15 +10242,17 @@ in with self; { migui = derive2 { name="migui"; version="1.1"; sha256="1qchjsc7ff2b6s9w6ncj9knjv6pyp90jd4jxljn2rr1ix1gc45za"; depends=[arm gWidgets2 mi]; }; miic = derive2 { name="miic"; version="1.0.3"; sha256="088szscn9v9279w86mypxphp3avv17iijvcvlckx3h1ka75lkx27"; depends=[bnlearn igraph MASS ppcor Rcpp]; }; milr = derive2 { name="milr"; version="0.3.0"; sha256="0z4d22fd6gd3zbi973vws9jqyh4c4m4i4ajcpxv934vxmbj0cma9"; depends=[glmnet numDeriv pipeR Rcpp RcppArmadillo RcppParallel]; }; - mime = derive2 { name="mime"; version="0.8"; sha256="18w98prfbivvygiyamsf9yg090kzbnvw2fn9b27823gmis4d08ny"; depends=[]; }; + mime = derive2 { name="mime"; version="0.9"; sha256="107sqarmyhxlch5nrg796i5z03p9mshskisiq2fm628ajk99gkrc"; depends=[]; }; mimi = derive2 { name="mimi"; version="0.2.0"; sha256="1ig34qd37my74nmlv3jcfrj7cnd55alxpf2flf2sssk2ws1y56xh"; depends=[data_table doParallel FactoMineR foreach glmnet rARPACK softImpute]; }; - mimsy = derive2 { name="mimsy"; version="0.4.2"; sha256="0f2yy5s9dxl8k12lrnc0w5d8vl0c9by0zc7gv05a2sq5jl7zrr8j"; depends=[dplyr lubridate magrittr openxlsx]; }; + mimsy = derive2 { name="mimsy"; version="0.4.3"; sha256="1mj0g2j0fw3j36r59yad7bfqhpjl1mjlca9fmmvxfjr878b4ld5g"; depends=[dplyr lubridate magrittr openxlsx]; }; minMSE = derive2 { name="minMSE"; version="0.1.1"; sha256="11m34nmxi2v80lsix8k44vl8ms5541js4av6h3pvx11px3i3c841"; depends=[MASS]; }; + mindr = derive2 { name="mindr"; version="1.2.3"; sha256="1slglva5ipbzj748k7rxvlw6g2iqdkvyf8qnplnzcjc2qsjljd1q"; depends=[data_tree htmlwidgets jsonlite knitr]; }; mineCitrus = derive2 { name="mineCitrus"; version="1.0.0"; sha256="031nfhrsc5rlqls3vyrk18lx0pd4ssdk96cmfr4ifaciz0rgv8h2"; depends=[ggplot2]; }; mined = derive2 { name="mined"; version="1.0-2"; sha256="1py6gylya8dhmxcyfrcwbwc5q226m041rs3cmj4q0dhqy8iy2zsw"; depends=[Rcpp RcppEigen]; }; minerva = derive2 { name="minerva"; version="1.5.8"; sha256="0k4ww3qfqrsnkccxk9dyq39xrc42g8gvj5g8drglg4fyci7jfs9h"; depends=[Rcpp RcppArmadillo]; }; miniCRAN = derive2 { name="miniCRAN"; version="0.2.12"; sha256="1jyrx86y8qdb3xdfpj812k0v492z3i6dnwy761qslwmn15xx8845"; depends=[assertthat httr igraph XML]; }; miniGUI = derive2 { name="miniGUI"; version="0.8-1"; sha256="0qb2fbkjwzn909yrk89d4951bwf8n05i0s265l8v2d4lpns9hc2i"; depends=[]; }; + miniMeta = derive2 { name="miniMeta"; version="0.2"; sha256="03r6xwcgchw42irqr8jy5hsbv8brk6f77h4zi9qhhz3zmkryjbw2"; depends=[colourpicker jsonlite markdown meta metafor readxl rhandsontable shiny shinyjs shinyWidgets WriteXLS]; }; miniUI = derive2 { name="miniUI"; version="0.1.1.1"; sha256="1h5h2sc57h95d6bsgs95l26911g38hvjc1v50bc31xl9689l2as5"; depends=[htmltools shiny]; }; minimalRSD = derive2 { name="minimalRSD"; version="1.0.0"; sha256="1p1jpi8lnv952k4c1wjgbgpb0hv4zg0f9qrd43cx0caibkqvhzf7"; depends=[]; }; minimap = derive2 { name="minimap"; version="0.1.0"; sha256="0y5yzic9pwpzs01gnl82syankijcjp85n22jn5zda0bp3y01r53r"; depends=[]; }; @@ -10251,10 +10272,10 @@ in with self; { misaem = derive2 { name="misaem"; version="0.9.2"; sha256="0awn0dvriycgmrx31ibckwjm2cq1wxrqjjjaq0bjgjsl37f4xnkk"; depends=[MASS mvtnorm]; }; misc3d = derive2 { name="misc3d"; version="0.8-4"; sha256="0qjzpw3h09qi2gfz52b7nhzd95p7yyxsd03fldc9wzzn6wi3vpkm"; depends=[]; }; miscF = derive2 { name="miscF"; version="0.1-4"; sha256="1kvkbvrmaqclwdfghkrsmnzb6xbi97icay2wwb7k5m34xhx4ha82"; depends=[MASS MCMCpack mvtnorm R2jags]; }; - miscFuncs = derive2 { name="miscFuncs"; version="1.2-10"; sha256="1kqya581n76ff9avhj6xm6nwsbw7zlm4mwy0vyvdlqlf7c381qq0"; depends=[mvtnorm roxygen2]; }; + miscFuncs = derive2 { name="miscFuncs"; version="1.3"; sha256="0wn7i9656km53wlml360qgpzqxlv1jsjnh4swhqgf5dyjva8i141"; depends=[mvtnorm roxygen2]; }; miscIC = derive2 { name="miscIC"; version="0.1.0"; sha256="0pnwc3b318xxnmb7scrj4qkqlvqfyczspdg496kl0ixsiaafr1ad"; depends=[nnls]; }; miscTools = derive2 { name="miscTools"; version="0.6-26"; sha256="16pwfxpyl0zv3hjxx2kjchkg7p6kbj0s2rrpskj7rkhjr9imlg5y"; depends=[digest]; }; - misclassGLM = derive2 { name="misclassGLM"; version="0.2.0"; sha256="1dz36q2gl0q8d0s2rxn28b8ykw31wcdxf91s7ypmjggfdj64i8br"; depends=[bigmemory foreach MASS Matrix mlogit numDeriv ucminf]; }; + misclassGLM = derive2 { name="misclassGLM"; version="0.3.2"; sha256="1b344dy5fm45jkjrqcx16905n9x0iwihr73mq2m0qfq7ay87nsrh"; depends=[bigmemory foreach MASS Matrix mlogit numDeriv ucminf]; }; miscor = derive2 { name="miscor"; version="0.1-1"; sha256="1vn0q0i2f1szjywddb7h7krpbf0qch6gmbzs03m4zb03xd70983b"; depends=[]; }; miscset = derive2 { name="miscset"; version="1.1.0"; sha256="1gwi7jnqdf2fa8yk8gmcc7dcv72bbdl7yj3yccj3r5jjk41vdp91"; depends=[data_table devtools ggplot2 gridExtra Rcpp xtable]; }; mise = derive2 { name="mise"; version="0.1.0"; sha256="1ydbm76w3y0p5h82shxjblwlzbrmzwx0bgq9w2axjwz2nx8jfw0a"; depends=[]; }; @@ -10268,14 +10289,16 @@ in with self; { missSBM = derive2 { name="missSBM"; version="0.2.1"; sha256="00jxj1f7hr78srlm49finf9j2q14y1cl66rwdkm1i81l8db5fvcp"; depends=[ape corrplot ggplot2 igraph magrittr nloptr R6 Rcpp RcppArmadillo]; }; missingHE = derive2 { name="missingHE"; version="1.3.2"; sha256="0i4af7479nnrbljbianwq4r6f0gs80y29mq9chykjyrbh0fpj15n"; depends=[bayesplot BCEA coda ggmcmc ggplot2 ggthemes gridExtra loo mcmcplots mcmcr R2jags]; }; mistat = derive2 { name="mistat"; version="1.0-5"; sha256="1vyx918b7iv1wcnk23bnlxljwy0hglpdx5drhrs5qcd45f6jrghc"; depends=[]; }; - mistr = derive2 { name="mistr"; version="0.0.2"; sha256="12zh6ys3lfc5ylidjhbmbxvbhjd3rg9vd89pv94547z9y1yf6sx5"; depends=[bbmle]; }; + mistr = derive2 { name="mistr"; version="0.0.3"; sha256="00pq56zlp27wsa88830pwqx1s2m3x7klzaw96jan8mp3r7hwskr4"; depends=[bbmle]; }; mistral = derive2 { name="mistral"; version="2.1.0"; sha256="1cr79p8q82lpj9d0y6q24xmfkxmnlqv8ivkd0baj7fxfb1nb8sak"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog]; }; + misty = derive2 { name="misty"; version="0.2.2"; sha256="1915lm9xl2k4q75yiw6kybcnxmzzriwmr00s5avpg654ag61shii"; depends=[haven]; }; mitml = derive2 { name="mitml"; version="0.3-7"; sha256="0yqyxkyi1kmv5k63wxj5kkg5g8igk1axk2csb4xhj6wz0p89dxy6"; depends=[haven jomo pan]; }; mitools = derive2 { name="mitools"; version="2.4"; sha256="0c2x2n1p53lcw0vx4vmy5j7m2f95i7g2iwbryl89imr99rvz617j"; depends=[DBI]; }; mix = derive2 { name="mix"; version="1.0-10"; sha256="0z16ddbh79kqxi64bl1h2sd8anpgc48n9d1nyr2zlln39nhv8w8g"; depends=[]; }; - mixAK = derive2 { name="mixAK"; version="5.1"; sha256="0i9gp66d1mzskiif0bk0w88cinc923fsj4vi7pv0im2cwmxksiiq"; depends=[coda colorspace fastGHQuad lme4 mnormt]; }; + mixAK = derive2 { name="mixAK"; version="5.2"; sha256="1fgyky6giscldrk13wjbkk26lbg6jzn6xzxm4wy4bjgbfmbar42m"; depends=[coda colorspace fastGHQuad lme4 mnormt]; }; mixEMM = derive2 { name="mixEMM"; version="1.0"; sha256="0344ay1avi37kvh5w9bknayx67yh7rflj6zhw68d2888v7cbghjy"; depends=[]; }; - mixKernel = derive2 { name="mixKernel"; version="0.3"; sha256="1kf8niplqf97n10zi6hkp9gmyyd15v6vsy741c089iwiazmixhdf"; depends=[corrplot ggplot2 LDRTools Matrix mixOmics phyloseq psych quadprog vegan]; }; + mixIndependR = derive2 { name="mixIndependR"; version="0.2.1"; sha256="0m858jjspkacfyxikisqij4d5ipz6fklgcczxzh7i4kv248p43w3"; depends=[stringr]; }; + mixKernel = derive2 { name="mixKernel"; version="0.4"; sha256="0bqa4inim7819pl3dr2kfzdvv7phqkjqfx3zal8mmxcjpkpxs4mf"; depends=[corrplot ggplot2 LDRTools Matrix mixOmics phyloseq psych quadprog reticulate vegan]; }; mixPHM = derive2 { name="mixPHM"; version="0.7-2"; sha256="1wvkdb9zj2j8dpppnyins05rg877zbydqsl3qaan62wznkknxcac"; depends=[lattice survival]; }; mixR = derive2 { name="mixR"; version="0.1.1"; sha256="1xd3v5rk59380zh7r6l5blmcy4gib9xp44j5dcrk6ivs6fgycsxh"; depends=[ggplot2 Rcpp]; }; mixRasch = derive2 { name="mixRasch"; version="1.1"; sha256="1r067pv7b54y1bz8p496wxv4by96dxfi2n1c99gziqf5ramx3qzp"; depends=[]; }; @@ -10293,13 +10316,14 @@ in with self; { mixl = derive2 { name="mixl"; version="1.1"; sha256="0v3yxhar1ms6y2j73a5hgyh1c9v6lg5xl646mv0ischqj21bysbh"; depends=[maxLik numDeriv randtoolbox Rcpp readr sandwich stringr]; }; mixlink = derive2 { name="mixlink"; version="0.1.5"; sha256="0ywgrcplhspc0x5fniw52xqz20y7j9mwgy4ky8lv3vii659mr52m"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; }; mixlm = derive2 { name="mixlm"; version="1.2.4"; sha256="0jwz918qnz1p71y82ayrgir9rpij8zk3jgmn63nq5xrlf0jbjcdd"; depends=[car leaps multcomp pls pracma]; }; - mixmeta = derive2 { name="mixmeta"; version="1.0.7"; sha256="0y0q38w9ljadh64kmmfn8chsmmrhpik54rh64iiq45b8ihxb1sq8"; depends=[]; }; + mixmeta = derive2 { name="mixmeta"; version="1.0.8"; sha256="1wx95pgd096d359n5mrl98hpwc2c1r2jw3pzvilkawx0y8lw68na"; depends=[]; }; mixor = derive2 { name="mixor"; version="1.0.4"; sha256="1l296z0a3kamb1m94pfx3vczp36pa0np101fy5c23kh45s59pbs7"; depends=[survival]; }; mixreg = derive2 { name="mixreg"; version="0.0-6"; sha256="04g863yxrlj0wqsmzzxph5110g3gjk094r59zzk0b9r89m8vhpsl"; depends=[]; }; mixsep = derive2 { name="mixsep"; version="0.2.1-2"; sha256="1ywwag02wbx3pkd7h0j9aab44bdmwsaaz0p2pcqn1fs3cpw35wa2"; depends=[MASS RODBC tcltk2]; }; mixsmsn = derive2 { name="mixsmsn"; version="1.1-6"; sha256="0zlbs0yn336xdzymrb065rbg1zj8f7zri77lmd7c4w1rxhfjh9a9"; depends=[mvtnorm]; }; + mixsqp = derive2 { name="mixsqp"; version="0.3-17"; sha256="0dmk5xpgq55bwdjfrnv6frfx708frszscx03h8l9cdsj3l1d002n"; depends=[irlba Rcpp RcppArmadillo]; }; mixtNB = derive2 { name="mixtNB"; version="1.0"; sha256="0lqbm1yl54zfs0xcmf3f2vcg78rsqyzlgvpydhmhg7x6dkissb22"; depends=[]; }; - mixtools = derive2 { name="mixtools"; version="1.1.0"; sha256="13wdm0xs5bakhpa8ypg6lvhjaqkxyabwz4glxdwn0jwdvkcdhgsl"; depends=[MASS segmented survival]; }; + mixtools = derive2 { name="mixtools"; version="1.2.0"; sha256="08whic8hmmzi55b7azwj11l2x5r9s5qbyrv7s9jr08156vqkw0zg"; depends=[kernlab MASS segmented survival]; }; mixtox = derive2 { name="mixtox"; version="1.3.2"; sha256="0mdnp1yrcxvan5l7jj91s41vq5y1kdnkhhinqrklmg4ph5f29dmq"; depends=[minpack_lm]; }; mixture = derive2 { name="mixture"; version="1.5"; sha256="1ahr8jw93xnd5hmy3h4sr209ql7gmkwbvnnfmiplbpc17czqgcn4"; depends=[]; }; mize = derive2 { name="mize"; version="0.2.3"; sha256="1rc3mhcwidmfbkfyxwldm9hg25lh7a81jlj2zv45vsj5hbrmvk6c"; depends=[]; }; @@ -10308,7 +10332,6 @@ in with self; { mkin = derive2 { name="mkin"; version="0.9.49.8"; sha256="01sjahhwz80aixxjksfb2bnilryggzs57cmhw6r6crq2sarzcqin"; depends=[deSolve inline lmtest numDeriv R6]; }; mknapsack = derive2 { name="mknapsack"; version="0.1.0"; sha256="1kzmx7d512681a4hjirfgcd7a8rvndb4da66p16gms5nnxzsby9c"; depends=[assertthat data_table lpSolve]; }; mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; }; - mlDNA = derive2 { name="mlDNA"; version="1.1"; sha256="0d9lydiwar98hin26slnym4svn0g1xmyn212vvzsx9lzlvs5a9k4"; depends=[e1071 igraph pROC randomForest ROCR rsgcc snowfall]; }; mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; }; mlVAR = derive2 { name="mlVAR"; version="0.4.4"; sha256="0ib566qygm28lqhr3w9vzfxnpsmazlipzrfsdm3cw21wpz2lvxcr"; depends=[abind arm clusterGeneration corpcor dplyr graphicalVAR lme4 MplusAutomation mvtnorm plyr qgraph]; }; mlapi = derive2 { name="mlapi"; version="0.1.0"; sha256="023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k"; depends=[Matrix R6]; }; @@ -10324,7 +10347,7 @@ in with self; { mlergm = derive2 { name="mlergm"; version="0.5"; sha256="145004r8xihphsng8pna430a8rqg0ibqx92jwyjkn7hzpx17p7xf"; depends=[cowplot ergm GGally ggplot2 lpSolve Matrix network plyr reshape2 sna stringr]; }; mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; }; mlf = derive2 { name="mlf"; version="1.2.1"; sha256="09ihnibpknpp26hdlbxyr99yz7z0n8qpsjs5aq3zngng0yh3wdn9"; depends=[]; }; - mlflow = derive2 { name="mlflow"; version="1.5.0"; sha256="1aks7azc3s51f40jhqgkr5hl43h18w5njzms7q6vchbdhb8cydrq"; depends=[base64enc forge fs git2r glue httpuv httr ini jsonlite openssl processx purrr reticulate rlang swagger tibble withr xml2 yaml zeallot]; }; + mlflow = derive2 { name="mlflow"; version="1.7.0"; sha256="1hdqdwj8j59a2x15alihv0p8hz4hlr9pk6c1qkyimcgfbvj8py04"; depends=[base64enc forge fs git2r glue httpuv httr ini jsonlite openssl processx purrr reticulate rlang swagger tibble withr xml2 yaml zeallot]; }; mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; }; mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; }; mlmRev = derive2 { name="mlmRev"; version="1.0-7"; sha256="0gj7yk2gll6y99q4h6ggds37fcww8d326h44rygcl155y0482rky"; depends=[lme4]; }; @@ -10333,36 +10356,36 @@ in with self; { mlmi = derive2 { name="mlmi"; version="1.0.0"; sha256="08sm836y40af3jd5gcl5pnyv1gqpx4ngkkw4xfp82h1j4yk47sy5"; depends=[cat gsl MASS Matrix mix norm]; }; mlmm_gwas = derive2 { name="mlmm.gwas"; version="1.0.6"; sha256="14xp8k7sww1skyw5l2006gpaw2c6yrri5nmfx4yav4vqdlhcj2k1"; depends=[coxme Matrix multcomp multcompView sommer]; }; mlmmm = derive2 { name="mlmmm"; version="0.3-1.2"; sha256="1m5ziiqs3ll1xjm1yf7x4sdc910jypn3kjnbadf95xxkvqmfrsqq"; depends=[]; }; - mlogit = derive2 { name="mlogit"; version="1.0-2"; sha256="18dnwbs0jlsp8sli6qr4j5gpg8v619hyq0cwkb1ms1kwngpszhsw"; depends=[Formula lmtest MASS Rdpack statmod zoo]; }; + mlogit = derive2 { name="mlogit"; version="1.0-3.1"; sha256="034vymf296abpajkic303j0x4mak62m8iav86k3d3g6hy3c03dp4"; depends=[Formula lmtest MASS Rdpack statmod zoo]; }; mlogitBMA = derive2 { name="mlogitBMA"; version="0.1-6"; sha256="1wl8ljh6rr1wx7dxmd1rq5wjbpz3426z8dpg7pkf1x9wr94a2q25"; depends=[abind BMA maxLik]; }; mlr = derive2 { name="mlr"; version="2.17.0"; sha256="0x7jggvhg8pf1hw013qrg7zdaf8yq5znjl2ap0f9a6w2j34b32yf"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; - mlr3 = derive2 { name="mlr3"; version="0.1.6"; sha256="096rn1ljkimhfvd487wyp3qb28dm7qhpyj35nghgci7y7cq50jam"; depends=[backports checkmate data_table digest lgr mlbench mlr3measures mlr3misc paradox R6 uuid]; }; - mlr3db = derive2 { name="mlr3db"; version="0.1.3"; sha256="0zg5hmlc7mybhrz0hrz4rmvdhbvjp4d0im0r22qvsd3phv614v8m"; depends=[checkmate data_table digest dplyr mlr3 R6]; }; - mlr3filters = derive2 { name="mlr3filters"; version="0.1.1"; sha256="0xis7yk3ycchpykl2kp0w1rx806rxnyrrcxnw9m240svzs3367x3"; depends=[backports checkmate data_table mlr3 mlr3misc paradox R6]; }; - mlr3learners = derive2 { name="mlr3learners"; version="0.1.5"; sha256="0yraazjfrd3vpbl9na5c77yy8lcdhisq30d7nl13ha2pssn7ifb3"; depends=[data_table mlr3 mlr3misc paradox R6]; }; - mlr3measures = derive2 { name="mlr3measures"; version="0.1.1"; sha256="0pbsj1yra3wx5xny4ak901qfj983lk8nsiqw2x8kzz46dskx4wzl"; depends=[checkmate]; }; - mlr3misc = derive2 { name="mlr3misc"; version="0.1.6"; sha256="1kcxkpm66n71rc2pzy1xpkfm797palfz2axj0shms4xpjilzfzf1"; depends=[backports checkmate data_table R6]; }; + mlr3 = derive2 { name="mlr3"; version="0.1.8"; sha256="02928qw5yc2zhfj69zrnmz0zraq2xf5vb7q7d11np2wdb0vsj1zk"; depends=[backports checkmate data_table digest lgr mlbench mlr3measures mlr3misc paradox R6 uuid]; }; + mlr3data = derive2 { name="mlr3data"; version="0.1.0"; sha256="0cdicfrrmba87adkcnpzm9gkcspjskqsbs8xryj1d0c48lzws7ab"; depends=[]; }; + mlr3db = derive2 { name="mlr3db"; version="0.1.5"; sha256="09hins00pc569vz26mkyg3736vhl01szl8hbwp2vyrh3mdn21c9m"; depends=[backports checkmate data_table digest dplyr mlr3 R6]; }; + mlr3filters = derive2 { name="mlr3filters"; version="0.2.0"; sha256="1dps9v4w82qnhvlrshwpaqppjmy405syp4qdirm456ydfw2gywcy"; depends=[backports checkmate data_table mlr3 mlr3misc paradox R6]; }; + mlr3learners = derive2 { name="mlr3learners"; version="0.1.6"; sha256="1wifc8757klkcb84pvs602wa3kc2n7g4vz0m63a83vgxwghlpp6q"; depends=[data_table mlr3 mlr3misc paradox R6]; }; + mlr3measures = derive2 { name="mlr3measures"; version="0.1.2"; sha256="0ni9r7xniybnkhy20wlrazl10ickav34510br8pf9s604494kxp1"; depends=[checkmate]; }; + mlr3misc = derive2 { name="mlr3misc"; version="0.1.8"; sha256="168d6az4paf3am4id6c9dnsyggnac3ccazr14594zs87a6cv87mn"; depends=[backports checkmate data_table R6]; }; mlr3pipelines = derive2 { name="mlr3pipelines"; version="0.1.2"; sha256="14clmipbqinmyrxfa363gjffdzijz1vd2zzbgkkldv44xszgb7p9"; depends=[backports checkmate data_table digest mlr3 mlr3misc paradox R6 withr]; }; - mlr3proba = derive2 { name="mlr3proba"; version="0.1.1"; sha256="0cangy4j3haglsc356az9l73k62m8i9b5wdvc5kpb848f63yzafc"; depends=[BBmisc checkmate data_table distr6 mboost mlr3 mlr3misc mlr3pipelines paradox R6 survival]; }; - mlr3tuning = derive2 { name="mlr3tuning"; version="0.1.1"; sha256="09wmil8v5vn705zhsj0rjag6sh3n1mdsjb79xca8x4a72lv09i45"; depends=[checkmate data_table lgr mlr3 mlr3misc paradox R6]; }; + mlr3proba = derive2 { name="mlr3proba"; version="0.1.3"; sha256="0k9xcw2bs3agbkn6i2nymfdr3irch4crdw4h733lrgyzds9rwigj"; depends=[checkmate data_table distr6 mlr3 mlr3misc mlr3pipelines paradox R6 survival]; }; + mlr3tuning = derive2 { name="mlr3tuning"; version="0.1.2"; sha256="0559jj4xbzg63df2rn0sw6r6fz5b463k2lcx83l4q3mki72pl9xx"; depends=[checkmate data_table lgr mlr3 mlr3misc paradox R6]; }; mlr3verse = derive2 { name="mlr3verse"; version="0.1.1"; sha256="1spwmylnsks479nkj688nd8h3slkh8cnmrxrvh7s2zyqla6arigx"; depends=[mlr3 mlr3db mlr3filters mlr3learners mlr3misc mlr3pipelines mlr3tuning mlr3viz paradox]; }; - mlr3viz = derive2 { name="mlr3viz"; version="0.1.0"; sha256="1c28hrpp3majw781jaayjhg9rwr52r0v00dfv78jy6rgaps9r37h"; depends=[checkmate data_table ggplot2 mlr3misc]; }; + mlr3viz = derive2 { name="mlr3viz"; version="0.1.1"; sha256="0k5a0h2jhk375hl4hwn1dxapjnm2hxhayw8rfh1i1p3qvswhgwla"; depends=[checkmate data_table ggplot2 mlr3misc]; }; mlrCPO = derive2 { name="mlrCPO"; version="0.3.4-4"; sha256="0v8d336f7xghs2pdh6r5j21i6mcy0p2wdzx4nkj69fsc5gn0n058"; depends=[backports BBmisc checkmate mlr ParamHelpers stringi]; }; - mlrMBO = derive2 { name="mlrMBO"; version="1.1.3"; sha256="1y67kc8kcbim23kkymkn10h761r5pyq80cfzz6a7f0rnmagzvqxp"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; + mlrMBO = derive2 { name="mlrMBO"; version="1.1.4"; sha256="007944cb6hz7rah0bk66mpfa22jinz9i224wljgnj0w51lpipbjv"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.1"; sha256="109ag52x4y3rzx8yccilrnl24mz4ximzx6v4lrbak7dpiclqrw7a"; depends=[]; }; - mlt = derive2 { name="mlt"; version="1.1-1"; sha256="0n2avjmi53y69wf0cz6v1n358n9vaf6shlf3vcppy2c2zny5l8rn"; depends=[alabama basefun BB coneproj nloptr numDeriv sandwich survival variables]; }; - mlt_docreg = derive2 { name="mlt.docreg"; version="1.0-4"; sha256="07x3qnfrlb3m71jyd0rqa3svdplcia3zis1qmcwm1c936p7nvjg4"; depends=[mlt numDeriv]; }; + mlt = derive2 { name="mlt"; version="1.1-2"; sha256="0dxfyq9wf49sy57gjvp2v6wp50wbiracvfsd4mbrgz4k36h3w5ra"; depends=[alabama basefun BB coneproj nloptr numDeriv sandwich survival variables]; }; + mlt_docreg = derive2 { name="mlt.docreg"; version="1.0-5"; sha256="1dp5h86bcga9lkc1hy5sbc3as0piyzxlz6z5iwli2a33ssyihxql"; depends=[mlt numDeriv]; }; mltest = derive2 { name="mltest"; version="1.0.1"; sha256="14gyssfph088v936mpywmd4y8z9vdv0zk8638vlg23j8cf5j4al2"; depends=[]; }; mltools = derive2 { name="mltools"; version="0.3.5"; sha256="045v28w7vz1zjxim8vfc6ncvg2mavr1q332x0hzlqpfzrk7gz4vh"; depends=[data_table Matrix]; }; mlxR = derive2 { name="mlxR"; version="4.1.0"; sha256="1jb214isf0zbx1j7xkidmc4jrvlw3hfvs7q2if3489p0si1n2k23"; depends=[ggplot2]; }; - mma = derive2 { name="mma"; version="9.0-0"; sha256="1nam7gn3a7jp4dcy9q6ypk7icknflvgmsdzv218qhf28zaw2ybza"; depends=[car doParallel foreach gbm gplots lattice plotrix survival]; }; + mma = derive2 { name="mma"; version="10.0-0"; sha256="1p62j60q7zbsabzv26cra510jdwinls11rqw2zjg7qm88nwagybh"; depends=[car doParallel foreach gbm gplots lattice plotrix survival]; }; mmabig = derive2 { name="mmabig"; version="2.0-0"; sha256="1kp7q2xvkbwa8syk82dsynzizjmhh9z3p7r5hnnvp169as0yvgwl"; depends=[car glmnet gplots mma survival]; }; - mmand = derive2 { name="mmand"; version="1.5.4"; sha256="04kqxdbj54nflgx9lb80xxp121ligdzjkym850z3kbw60ashxybh"; depends=[Rcpp]; }; + mmand = derive2 { name="mmand"; version="1.6.1"; sha256="19s6v083iry95akhc2ccj617sjcddalb6dp87j3lqjlgybxws62q"; depends=[Rcpp]; }; mmap = derive2 { name="mmap"; version="0.6-19"; sha256="0s3vlwdcwifl2a2byr0f2cc4vmbdparc55x889a3h115ga7k91w2"; depends=[]; }; mmapcharr = derive2 { name="mmapcharr"; version="0.3.0"; sha256="175qb6ay6zlcdcxzc86lmlddfzjc8j8i1b8cvi2q0j6nbl2kl50r"; depends=[Rcpp rmio]; }; mmc = derive2 { name="mmc"; version="0.0.3"; sha256="03nhfhiiadga8mcp33kj20g33v9n5i62fdqgi20h5p80g849k719"; depends=[MASS survival]; }; - mmcm = derive2 { name="mmcm"; version="1.2-7"; sha256="11dgb8crz5pjpx66cxxzn4lg58jbaxxhfqlcw3hdp9wpvyqjh3sb"; depends=[mvtnorm OpenMPController]; }; - mmds = derive2 { name="mmds"; version="1.1"; sha256="0f5qzkfhi7vg8vsd8r41idmbwrrgc7qzfnp81adms2yzrza17wrw"; depends=[]; }; + mmcm = derive2 { name="mmcm"; version="1.2-8"; sha256="09xcvgzgg5x890jibmmbcd3rr8q8vmwxwk6s8zgn9a8hfdwqny9a"; depends=[mvtnorm]; }; mme = derive2 { name="mme"; version="0.1-6"; sha256="1k60y1yrf7fv939v32kf3il7r3cws0kih4bpm0ap28fvbx3vr3yb"; depends=[MASS Matrix]; }; mmeln = derive2 { name="mmeln"; version="1.4"; sha256="0q5w3ajc1v798dyvryny2a0c52hzhxrjm4md08mqvww65pdzhqc4"; depends=[]; }; mmeta = derive2 { name="mmeta"; version="2.3"; sha256="0hyxpph2hfjwiy95r0n3h64aab5ziqp2a8gmmpp6nyc77h638czb"; depends=[aod]; }; @@ -10371,21 +10394,22 @@ in with self; { mmm2 = derive2 { name="mmm2"; version="1.2"; sha256="1h9pn5s3jjs4bydrr1qysjb4hv7vs4h3m7mvi22ggs2dzyz3b298"; depends=[gee]; }; mmmgee = derive2 { name="mmmgee"; version="1.20"; sha256="0y3pwnc9h7y2l9cvgfl62nl1vnnkla2y8082jhdvxsb3mk88rgad"; depends=[Matrix mvtnorm]; }; mmod = derive2 { name="mmod"; version="1.3.3"; sha256="1dz6887mlqbagjj98wcabmxj9hvsz8pgsizy1fqkwjhhs44c62y4"; depends=[adegenet pegas]; }; - mmpca = derive2 { name="mmpca"; version="1.0.2"; sha256="0km129g98bbzi48akqad97nxss5qkxpsx77hpmam4nsbfj4idn6f"; depends=[CMF digest gsl Rcpp RcppEigen]; }; + mmpca = derive2 { name="mmpca"; version="2.0.0"; sha256="15jmfp8dyrxnl2hsc815np1qvkjh6j1h6zf040bnqa7c7jlr5gpy"; depends=[digest gsl Rcpp RcppEigen]; }; mmpf = derive2 { name="mmpf"; version="0.0.5"; sha256="1w1ll1l7yzwb1wmlrcfpgqyzni7yb20kxy422y867hx2ndxlfwpz"; depends=[checkmate data_table]; }; mmpp = derive2 { name="mmpp"; version="0.6"; sha256="16aypjf4i0ya3qgxqrrg8y0xbnq1pnqky1dpkgln5q494hphyg91"; depends=[]; }; mmppr = derive2 { name="mmppr"; version="0.1"; sha256="0fswkqcw0xkqd9gmqabb61i32zscp5jzfx0z43wq7mrlwynryylv"; depends=[expm reshape2]; }; mmsample = derive2 { name="mmsample"; version="0.1"; sha256="0mdd2zryadd31a5pls5fvlxx52mr54jsi1i6mwrs4y7rl3i9v95z"; depends=[MASS Rcpp RcppArmadillo]; }; - mmtfa = derive2 { name="mmtfa"; version="0.3"; sha256="0qfszr6f10v27w1pfns78dyarznqryl4m1ppyqap7l8fc12sliky"; depends=[matrixStats mvnfast]; }; mmtsne = derive2 { name="mmtsne"; version="0.1.0"; sha256="1by0hrggla6idc1isnq072i1wfpw4x7id3hkg8l65gy8iycccd12"; depends=[]; }; mnis = derive2 { name="mnis"; version="0.2.7"; sha256="1yhhgrhsk3ww93vd29ipw16bkn16w0b2i7d46cb5bb5xs4s7vivd"; depends=[dplyr httr jsonlite Rcpp stringi tibble]; }; mniw = derive2 { name="mniw"; version="1.0"; sha256="1iamq6cq027ncakm4rfx2p1k2mcj7nk5vk57m8ndnbmmi2y9wwv9"; depends=[Rcpp RcppEigen]; }; mnj = derive2 { name="mnj"; version="1.0"; sha256="05rz6krcq56zqvvaz3myf1aki2z635g2zrqyl25n2da1cvyjwdzq"; depends=[rpart]; }; mnlfa = derive2 { name="mnlfa"; version="0.1-53"; sha256="1hw4m6zpb2322041aizam1l71zxz3i7siawid8npig8v9dhkaqrf"; depends=[CDM Rcpp RcppArmadillo]; }; mnlogit = derive2 { name="mnlogit"; version="1.2.6"; sha256="0dfwpkl8g7ap5xr48smiv8vdbamd2r1liy9nwpsn0kcsr9cj65n9"; depends=[Formula lmtest mlogit]; }; + mnonr = derive2 { name="mnonr"; version="1.0.0"; sha256="143qkn3bx37a6r7kgmspqh55l2r8k9f93jgxr6qpg51w411k5ilb"; depends=[]; }; mnormpow = derive2 { name="mnormpow"; version="0.1.1"; sha256="0z53vwhkhkkr6zrjhd3yr14mb02vh7lr63frf0ivajndxiap0s9v"; depends=[]; }; - mnormt = derive2 { name="mnormt"; version="1.5-5"; sha256="1b34xxrnf35khsx82mhvmk96sgfr2flyasaah7qkb2976pwxay7z"; depends=[]; }; + mnormt = derive2 { name="mnormt"; version="1.5-6"; sha256="0k8y08gj6z525yvc7y3dl2kzgnafbj3i7lvpamypsmqxf74zql99"; depends=[]; }; mnreadR = derive2 { name="mnreadR"; version="2.1.4"; sha256="11mfpf12pjpgvcih6q8l9fwspj2gy78fcirimzv7gn061nr4v7sg"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; + mob = derive2 { name="mob"; version="0.1.0"; sha256="0zxp02fl514wb3apcyg072wdydqbnbfqkjj9gq5ql1kkvgh9wqf8"; depends=[gbm Hmisc Rborist]; }; mobForest = derive2 { name="mobForest"; version="1.3.1"; sha256="1g5yfs70abl7pacprijlwdq3l72aqkbqs09z1pmw64wv4wa1vm25"; depends=[modeltools party sandwich strucchange zoo]; }; mobsim = derive2 { name="mobsim"; version="0.1.0"; sha256="077hw1162giwc90y5dvj9052i5hxdf2ii29m9q8ky028375dsd0f"; depends=[Rcpp sads vegan]; }; moc = derive2 { name="moc"; version="2.0"; sha256="0fgp8dg9qf7aw1qawmszlxs4bcccqmd87y4kkzdqggm807c2k5gh"; depends=[]; }; @@ -10403,25 +10427,26 @@ in with self; { modeLLtest = derive2 { name="modeLLtest"; version="1.0.0"; sha256="1f80bgw1l6zgwlhz1agdrl5d44jfrk50yi3jgwf14l4zjx8x8rp3"; depends=[coxrobust MASS quantreg Rcpp RcppArmadillo survival]; }; modeest = derive2 { name="modeest"; version="2.4.0"; sha256="087dw0013y4m7fcl06mxylh9lnp6acysl80d80r9srv4pw4r950s"; depends=[fBasics stable stabledist statip]; }; modehunt = derive2 { name="modehunt"; version="1.0.7"; sha256="0qz9kmf1qfs2dr7kzm9l7ac0h5rvi3b9j9896p991sk4bcalsl0b"; depends=[]; }; + model4you = derive2 { name="model4you"; version="0.9-5"; sha256="1l94196x594ff61f8iaywpmw9ra3g27bnlchjl14hb9h0l21vbgm"; depends=[Formula ggplot2 gridExtra partykit sandwich survival]; }; modelDown = derive2 { name="modelDown"; version="1.0.1"; sha256="0rdpma8g461a17n6qsdvjb9s5nnhap1n05mavjy8cpj7d8j7ikkv"; depends=[archivist auditor breakDown DALEX devtools drifter DT ggplot2 kableExtra psych svglite whisker]; }; modelObj = derive2 { name="modelObj"; version="4.0"; sha256="1py2y80x37mmnl2y0pxdbhqkjrln6x210hg0g224d34lxk71m172"; depends=[]; }; - modelStudio = derive2 { name="modelStudio"; version="0.2.1"; sha256="0fxrfd9ylgy39ivrvcg3gfvfbwbxwwrjx0bvgzibmvb6p8fg68qr"; depends=[iBreakDown ingredients jsonlite r2d3]; }; - modelbased = derive2 { name="modelbased"; version="0.1.1"; sha256="08ck275nfvskrnvlixclyz994bagwlc1gcca0qnh3x9mq9xcspiy"; depends=[bayestestR emmeans insight parameters]; }; + modelStudio = derive2 { name="modelStudio"; version="1.0.1"; sha256="0lghbxa27kyg1m8d3n8a6z9b248nzi4ahzvm221gbvxjgk0mrgi4"; depends=[iBreakDown ingredients jsonlite progress r2d3]; }; + modelbased = derive2 { name="modelbased"; version="0.1.2"; sha256="0440pckpw9vfbvvhxsikayb0b6k479icr2m9ps0yr0xph240x9hw"; depends=[bayestestR emmeans insight parameters]; }; modeldata = derive2 { name="modeldata"; version="0.0.1"; sha256="0dzjgb5g60hgqppxvzin8m51clkw8d89if7dw5ha46j2paw1n5r9"; depends=[]; }; - modeldb = derive2 { name="modeldb"; version="0.2.0"; sha256="1qcgmv31gd1x0mzxq4lcarmswsr75qgq5zpfcwchxzrz97ncbwgd"; depends=[dplyr ggplot2 progress purrr rlang tibble tidypredict]; }; + modeldb = derive2 { name="modeldb"; version="0.2.2"; sha256="14s8xh05qxv414xcnww1b3s0jqwnjb3l1dqf7q1qbw33ilwcmsfb"; depends=[dplyr ggplot2 progress purrr rlang tibble tidypredict]; }; modelfree = derive2 { name="modelfree"; version="1.1-1"; sha256="0ammka2wxx90z31zfzypw9dk5n118l0vxhykxbx6srfig2vdyn82"; depends=[PolynomF SparseM]; }; modelgrid = derive2 { name="modelgrid"; version="1.1.1.0"; sha256="1z6g0akczry7vldkk6anfq572zbsfzbd6qnyllgjpbxhy3rrrq0r"; depends=[caret dplyr ggplot2 lattice magrittr purrr]; }; modelplotr = derive2 { name="modelplotr"; version="1.0.0"; sha256="1b1pcah28b2fsr5l7v3lwxgvl03jr2cyxk5x5plnc3vwy5g0bnpm"; depends=[dplyr ggfittext ggplot2 gridExtra magrittr RColorBrewer rlang scales]; }; - modelr = derive2 { name="modelr"; version="0.1.5"; sha256="0nnfhlzz75ihs8azy963cc4cwg1kx81rybk4z3wm98bbghwfxfs5"; depends=[broom dplyr magrittr purrr rlang tibble tidyr]; }; - modelsummary = derive2 { name="modelsummary"; version="0.1.0"; sha256="1g6yc89q267zjplqpwiy6wwvdswyhr6lhg2sldm8zhmbm81jcvks"; depends=[broom checkmate dplyr generics magrittr purrr stringr tibble tidyr]; }; - modeltools = derive2 { name="modeltools"; version="0.2-22"; sha256="1s9lmkac3rl0nknf4wizfhg7ryq7c8yvvyc4z619238br27hhsi5"; depends=[]; }; + modelr = derive2 { name="modelr"; version="0.1.6"; sha256="1x2m34m4qirb401krmgc5wg3g7ndbcglfab2l0655rmky3fz7rfp"; depends=[broom dplyr magrittr purrr rlang tibble tidyr tidyselect]; }; + modelsummary = derive2 { name="modelsummary"; version="0.1.1"; sha256="0zi7ysxyv83pgcwasn3jww4dm10mn8y40hm029slzvmf7fdwm93y"; depends=[broom checkmate dplyr generics magrittr purrr stringr tibble tidyr]; }; + modeltests = derive2 { name="modeltests"; version="0.1.0"; sha256="00g6jc41caxz2fqynv1pcwdabzwhppqmrrf2x4xzlxpf9sfxr919"; depends=[dplyr generics purrr testthat tibble]; }; + modeltools = derive2 { name="modeltools"; version="0.2-23"; sha256="1vqh69256h344sbj5affm0kmc77dakrxp6442xfdnfd0y5d8sgkb"; depends=[]; }; modelwordcloud = derive2 { name="modelwordcloud"; version="0.1"; sha256="0ardib0h923i7jk8bgcq6pn2zazx9acf9sdggifsk46hdz8hvqnm"; depends=[]; }; moderndive = derive2 { name="moderndive"; version="0.4.0"; sha256="16fbr80v0f5v6is19d5zh9s2qgqw2cb5q71lna7lp0hi22xljl98"; depends=[broom dplyr formula_tools ggplot2 glue infer janitor knitr magrittr rlang stringr tibble]; }; - modes = derive2 { name="modes"; version="0.7.0"; sha256="185qjrmz2sj0l5931g4d3kx3jpgjn4rf4lln84h6g97prk1ykqmj"; depends=[]; }; modest = derive2 { name="modest"; version="0.3-1"; sha256="07rs014hdcabp2n0gg14pz2gmqgbw38vjv7a80vkzzh3601hxqws"; depends=[knitr rhandsontable shiny shinyBS]; }; modesto = derive2 { name="modesto"; version="0.1.2"; sha256="0vmdj8wcy0vv9jaihxrj0m5sr7favz18ngfqc8pd8rd4ipcnxkjf"; depends=[markovchain]; }; modi = derive2 { name="modi"; version="0.1.0"; sha256="0v78vzb22v2h2qlfhsyi0d2j3c2gj3wgv67p6gv74269kiaglf92"; depends=[MASS norm]; }; - modifiedmk = derive2 { name="modifiedmk"; version="1.4.0"; sha256="0dcriw45qmh1r05kf7v6r6q1qz58zfyfi8diskzvj7zclicg59md"; depends=[boot]; }; + modifiedmk = derive2 { name="modifiedmk"; version="1.5.0"; sha256="171l3ls7icaanqf6jb64jabwq0mis2g1fswr0jfkpkrw5iw1c66q"; depends=[boot]; }; modiscloud = derive2 { name="modiscloud"; version="0.14"; sha256="0vwhfp50yb21xkanvzk983vk0laflv60kj1ybx3fydfljwqx0rwj"; depends=[date raster rgdal sfsmisc sp]; }; modmarg = derive2 { name="modmarg"; version="0.9.2"; sha256="1clyfvn5k87nyh5cj4b0yi2zkavwvnirhlirxkzi8m2qijdl9vgh"; depends=[]; }; modopt_matlab = derive2 { name="modopt.matlab"; version="1.0-2"; sha256="0g5mswalv4y7p1k3n8a6qf7wb072m4bjq2ml2j83dz2j2bmvygsd"; depends=[ROI ROI_plugin_glpk ROI_plugin_quadprog]; }; @@ -10431,15 +10456,16 @@ in with self; { moezipfR = derive2 { name="moezipfR"; version="1.0.2"; sha256="0sfl1c7cvm1milcglcvz9lyvgricsdm7shx0jxyn50y7xz0padww"; depends=[tolerance VGAM]; }; mogavs = derive2 { name="mogavs"; version="1.1.0"; sha256="0lhmwdv991bv7j8k066jr7ii94w60ydjpf5pzmv8jlblf3w2pr02"; depends=[cvTools]; }; mokken = derive2 { name="mokken"; version="2.8.11"; sha256="1dypdf5gdz0hr3izafzfknyqx2vbr1z77c4c7vqdygv2wzhwy5i1"; depends=[poLCA]; }; - moko = derive2 { name="moko"; version="1.0.1"; sha256="1d1gyv44z8k196hfh8a9iccmlrwb42bj1xzabs07h306gpi9m73d"; depends=[DiceKriging DiceOptim emoa GenSA GPareto mco]; }; - molaR = derive2 { name="molaR"; version="4.4"; sha256="0prd2avg3aj4y8zi7yd2sgcary8igqxrjcp0igail84kpnal53zq"; depends=[alphahull rgl Rvcg]; }; + moko = derive2 { name="moko"; version="1.0.2"; sha256="16hcr570h73ljgfb14pcli358m5vy022bqx1davn26z21n3ls44y"; depends=[DiceKriging DiceOptim emoa GenSA GPareto mco]; }; + molaR = derive2 { name="molaR"; version="4.5"; sha256="1mfb05cfg0jh60yxnmwhja6m38185r58kbz2ak0ikgaqd9lls07s"; depends=[alphahull rgl Rvcg]; }; mombf = derive2 { name="mombf"; version="2.2.9"; sha256="0z7crgvl1c15s0pn6isa9i4phfsbhl6msc1jdbk88ckh09ilx0z7"; depends=[mclust mgcv mvtnorm ncvreg Rcpp RcppArmadillo survival]; }; momentchi2 = derive2 { name="momentchi2"; version="0.1.5"; sha256="1fv0jmwws4mkl9dsaybfpj29ncvqx2idsijgwz2qjblcg309a6k9"; depends=[]; }; + momentfit = derive2 { name="momentfit"; version="0.1-0"; sha256="0f9303plxg5f58s2ypyzly5sghk535cfm078sigj0c9izam3nhmc"; depends=[sandwich]; }; moments = derive2 { name="moments"; version="0.14"; sha256="0f9y58w1hxcz4bqivirx25ywlmc80gbi6dfx5cnhkpdg1pk82fra"; depends=[]; }; - momentuHMM = derive2 { name="momentuHMM"; version="1.5.0"; sha256="0qbl6vl9s30z3qh7c7g9ml7dr0rjicpw0m6wbjsan3isqj3aa6p6"; depends=[argosfilter Brobdingnag car CircStats conicfit crawl data_tree doParallel doRNG dplyr extraDistr foreach geosphere ggmap ggplot2 lubridate magrittr MASS mitools moveHMM mvtnorm nleqslv numDeriv prodlim qdapRegex raster Rcpp RcppArmadillo rlang scatterplot3d sp survival]; }; + momentuHMM = derive2 { name="momentuHMM"; version="1.5.1"; sha256="01s0nv37w7nzg4jpm94sxi2m9kxlswcr00l1fm1y1c6x1asx4hpq"; depends=[argosfilter Brobdingnag car CircStats conicfit crawl data_tree doParallel doRNG dplyr extraDistr foreach geosphere ggmap ggplot2 lubridate magrittr MASS mitools moveHMM mvtnorm nleqslv numDeriv prodlim qdapRegex raster Rcpp RcppArmadillo rlang scatterplot3d sp survival]; }; momr = derive2 { name="momr"; version="1.1"; sha256="091vzaw8dm29q89lg2iys25rbg2aslgdn9sk06x038nngxdrn95r"; depends=[gplots Hmisc nortest]; }; mondate = derive2 { name="mondate"; version="0.10.01.02"; sha256="18v15y7fkll47q6kg7xzmj5777bz0yw4c7qfiw2bjp0f3b11qrd2"; depends=[]; }; - mongolite = derive2 { name="mongolite"; version="2.1.0"; sha256="0w9szs80a6isff6f2mwhh0wcigssf80v3njvisfczcj3cbwdqxnr"; depends=[jsonlite mime openssl]; }; + mongolite = derive2 { name="mongolite"; version="2.2.0"; sha256="1q9vj5jhvwvzjjcaanyj6zhmplyk7rmibp4hvyabp9lpig2clnsm"; depends=[jsonlite mime openssl]; }; monitoR = derive2 { name="monitoR"; version="1.0.7"; sha256="1h1g0m1j13mz37xxwck4s7a0bfqvi0nrzfw60j7bkzaah8zxcc9n"; depends=[tuneR]; }; monkeylearn = derive2 { name="monkeylearn"; version="0.2.0"; sha256="18lpfs64h0hy4vkdjlnmxwgagvf54kn8a1c866vv00ckyp85fvn2"; depends=[cowsay digest dplyr httr jsonlite magrittr purrr ratelimitr tibble tidyr]; }; monmlp = derive2 { name="monmlp"; version="1.1.5"; sha256="19cx60csm8mnf6ksg64vlhi8wi1c7bmv9l55y9zmaljblr0kmzxf"; depends=[optimx]; }; @@ -10456,12 +10482,11 @@ in with self; { morse = derive2 { name="morse"; version="3.2.5"; sha256="1y3daw8ccn0n61kj6lj6m3m4pfj936k786d385lyq05211rkdgqr"; depends=[coda deSolve dplyr epitools ggplot2 gridExtra magrittr reshape2 rjags tibble tidyr zoo]; }; mortAAR = derive2 { name="mortAAR"; version="1.0.2"; sha256="047xagjmqj6sla0zlz0ljdivggkv04i45yn7637a33ni1pmb83al"; depends=[magrittr Rdpack reshape2]; }; mortyr = derive2 { name="mortyr"; version="0.0.1"; sha256="1mpgb9rcknghwm9xsn3d8s6fy4j319sinb6l76s8aq06n4f3hr7g"; depends=[httr jsonlite tibble]; }; - mosaic = derive2 { name="mosaic"; version="1.5.0"; sha256="1j3dq8y2zpr3cad5pgbd3qm9ls17z0s6f9qqp5ddh110wf5kz0h4"; depends=[broom dplyr ggdendro ggformula ggplot2 ggrepel glue gridExtra lattice latticeExtra lazyeval leaflet MASS Matrix mosaicCore mosaicData readr tidyr]; }; - mosaicCalc = derive2 { name="mosaicCalc"; version="0.5.0"; sha256="05s14rmgi15xcz50hcz7l26l95yx9g4i3kihzh0laz8bpi443i39"; depends=[MASS mosaic mosaicCore]; }; + mosaic = derive2 { name="mosaic"; version="1.6.0"; sha256="07964r7mjq050ddm0n5j20zgx08qfhwxazkxlm63scwpkx3kskj9"; depends=[broom dplyr ggdendro ggformula ggplot2 ggrepel glue gridExtra lattice latticeExtra leaflet MASS Matrix mosaicCore mosaicData readr rlang tidyr]; }; mosaicCore = derive2 { name="mosaicCore"; version="0.6.0"; sha256="1klw97h6lchw1cpcl8s637ikcl428cckmjq0czi7mibh9q9mw72z"; depends=[dplyr lazyeval MASS rlang tidyr]; }; mosaicData = derive2 { name="mosaicData"; version="0.17.0"; sha256="04z0mdm52mykqsxsinhmsihn181zf6cw321gayk2rjp7lj7mwdq9"; depends=[]; }; mosaicModel = derive2 { name="mosaicModel"; version="0.3.0"; sha256="1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w"; depends=[caret dplyr ggformula ggplot2 knitr lazyeval MASS mosaicCore testthat tibble tidyr tidyverse]; }; - mosmafs = derive2 { name="mosmafs"; version="0.1.0"; sha256="1i12w3k9wcr7n28z8wwrrajclalfiwiavlf6i5whbn4z5wpnmh4l"; depends=[BBmisc checkmate ecr MASS mlr mlrCPO parallelMap ParamHelpers smoof]; }; + mosmafs = derive2 { name="mosmafs"; version="0.1.1"; sha256="09xwymjbxaw0vyz835w20v9l2w744vy7r2ngw6d709cw3dslnir4"; depends=[BBmisc checkmate ecr MASS mlr mlrCPO parallelMap ParamHelpers smoof]; }; mosum = derive2 { name="mosum"; version="1.2.3"; sha256="1xrrx0gaby5gbqssvhwracm8wny31lqzd64hkmr81s41z8srkxx9"; depends=[plot3D RColorBrewer Rcpp]; }; motmot = derive2 { name="motmot"; version="2.1.3"; sha256="09qsyc4ifdl316kjqqkarmflpjcd0ivkhx5fzi3502anj6dxpjnq"; depends=[ape caper coda ks mvtnorm Rcpp]; }; motoRneuron = derive2 { name="motoRneuron"; version="1.0.0"; sha256="1hdsf4c1v5hfaqpi5y1v60zqq5fdmlqdvzpsq77diclp9vzdshja"; depends=[dygraphs ggplot2]; }; @@ -10472,23 +10497,24 @@ in with self; { movMF = derive2 { name="movMF"; version="0.2-4"; sha256="0j5gp1l374479lsijw1hz00pxs09zzh7hapljv80lsvr24vfscpa"; depends=[clue skmeans slam]; }; move = derive2 { name="move"; version="3.2.2"; sha256="14wmiyk52iar90kbzi6ksl75i0kg2nmsq08sms9rr2wgswr9f7km"; depends=[geosphere httr memoise raster Rcpp rgdal sp xml2]; }; moveHMM = derive2 { name="moveHMM"; version="1.7"; sha256="031msh427hgjyr37imalr7smd79yqscw9xq5rjrixxc2w5qly9jj"; depends=[boot CircStats geosphere ggmap ggplot2 MASS numDeriv Rcpp RcppArmadillo sp]; }; - moveVis = derive2 { name="moveVis"; version="0.10.3"; sha256="1sphh8v16k0qis1ajc81sg0lb3dca7mf0wz4khlxra8sg6cj4gk2"; depends=[av cowplot curl dplyr geosphere ggplot2 gifski lubridate magick magrittr move pbapply plyr raster RStoolbox sf slippymath sp zoo]; }; + moveVis = derive2 { name="moveVis"; version="0.10.4-1"; sha256="01shqgn35f29y3s93b2f8r1dv587v1b07wrswhbf3592kcfjscf2"; depends=[av cowplot curl dplyr geosphere ggplot2 gifski lubridate magick magrittr move pbapply plyr raster RStoolbox sf slippymath sp zoo]; }; moveWindSpeed = derive2 { name="moveWindSpeed"; version="0.2.3"; sha256="14a2iymn4j831xlh42z5qxmhnh7xpp5bxasgpkhnb3v0b5ldyilh"; depends=[move Rcpp]; }; movecost = derive2 { name="movecost"; version="0.3"; sha256="0lrnk09sdbamxc4xhrkgggjcim1xhbsnq13f3ysadn7d1rjazl9i"; depends=[gdistance raster rgdal rgeos sp]; }; mozzie = derive2 { name="mozzie"; version="0.1.0"; sha256="09dwrv4r0hi19gzi1vpif3q4wlbny9h22430g1hhv0wkqs86mhmw"; depends=[]; }; mp = derive2 { name="mp"; version="0.4.1"; sha256="0awvwqwb25q47j14b450k1k5mh2yzwhn7gizjv5j7lyiamk30iwq"; depends=[Rcpp RcppArmadillo]; }; + mpMap2 = derive2 { name="mpMap2"; version="1.0.1"; sha256="187qrxbgcws98ghjjz40dafd33bzd5cyhiyixmrgpplfs82ciwj7"; depends=[car fastcluster ggplot2 igraph jsonlite Matrix nnls progress pryr qtl RColorBrewer Rcpp sn]; }; mpa = derive2 { name="mpa"; version="0.7.3"; sha256="0mhnsbgr77fkn957zfiw8skyvgd084rja1y4wk5zf08q5xjs2zvn"; depends=[network]; }; - mpath = derive2 { name="mpath"; version="0.3-21"; sha256="0sgfzpyzl2494d9nj09qs1dszpzsv9wwf79wj9aypjm8sndl18yj"; depends=[bst doParallel foreach MASS numDeriv pscl]; }; + mpath = derive2 { name="mpath"; version="0.3-23"; sha256="02hi39s7zix3jrcajw41sw5iiq6l8z74hl513x0fc7jcij5rwzqr"; depends=[bst doParallel foreach MASS numDeriv]; }; mpbart = derive2 { name="mpbart"; version="0.2"; sha256="1145n0lxmm0kjm2lc358d79hqws48crj17pjvmchl1pbfd7zi4r8"; depends=[bayesm cvTools mlbench mlogit]; }; mpcmp = derive2 { name="mpcmp"; version="0.1.3"; sha256="11j12ns04g2xdw5r34x86bacwacf3618rzpqz8wvfs1l192l001c"; depends=[]; }; mpcv = derive2 { name="mpcv"; version="1.1"; sha256="0vwycspiw9saj811f6alkbijivy7szpahf35bxn2rpn2bdhbn21i"; depends=[lpSolve]; }; mpe = derive2 { name="mpe"; version="1.0"; sha256="17bgdbg1zrf78djd3mwycidwibxvsis7pwkrcynvghcc8l2zfci9"; depends=[mvtnorm]; }; - mplot = derive2 { name="mplot"; version="1.0.3"; sha256="0mjxfk9j83d4ldj62clf71ygxqhc48mdszggnh2mf30waiqnlcbc"; depends=[bestglm doParallel doRNG dplyr foreach ggplot2 glmnet googleVis leaps plyr reshape2 scales shiny shinydashboard tidyr]; }; + mplot = derive2 { name="mplot"; version="1.0.4"; sha256="1f3llh1599q8259la02nvdigrs4p4j1l4qsp5bxi19my6gff0l10"; depends=[bestglm doParallel doRNG dplyr foreach ggplot2 glmnet googleVis leaps plyr reshape2 scales shiny shinydashboard tidyr]; }; mpm = derive2 { name="mpm"; version="1.0-22"; sha256="0wijw8v0wmbfrda5564cmnp788qmlkk21yn5cp5qk8aprm9l1fnk"; depends=[KernSmooth MASS]; }; mpmcorrelogram = derive2 { name="mpmcorrelogram"; version="0.1-4"; sha256="0gv9xswrfvndcjal0csab1w2cnl4rg8pznyxbz84b0qr95jg81ag"; depends=[vegan]; }; mpmi = derive2 { name="mpmi"; version="0.43"; sha256="15nhh7lizx06mws6gibsvmv29mz1q9id5rqmdbzlk8h1050lcg20"; depends=[KernSmooth]; }; - mpoly = derive2 { name="mpoly"; version="1.1.0"; sha256="1ixidhgp6bfb31kwv7gfvra47zs2f9qa3pf00qrqxkn6zgjkbspd"; depends=[ggplot2 orthopolynom partitions plyr polynom stringr tidyr]; }; - mppR = derive2 { name="mppR"; version="1.2.0"; sha256="0ij1r4pihlm79mywacz5fmgd6nww9026mp9a3hamslpn68pflvpz"; depends=[ggplot2 igraph qtl]; }; + mpoly = derive2 { name="mpoly"; version="1.1.1"; sha256="10is69ks22ka1cqw3xk0fvy4z3b2drm8lanqwj178qrzj7ipf7i0"; depends=[ggplot2 orthopolynom partitions plyr polynom stringi stringr tidyr]; }; + mppR = derive2 { name="mppR"; version="1.2.1"; sha256="0q4pyfwypicmx8lqkgjkmagh6kyr6iww8xa64fxv0ayf8pcbzrca"; depends=[ggplot2 igraph qtl]; }; mppa = derive2 { name="mppa"; version="1.0"; sha256="06v6vq2nfh4b407x2gyvcp5wbdrcnk3m8y58akapi66lj8xplcx4"; depends=[]; }; mpr = derive2 { name="mpr"; version="1.0.5"; sha256="132ahy05zrh2164bffiywgbarxvzkc30k79w7ph9ca8d9mpgj70b"; depends=[survival]; }; mpt = derive2 { name="mpt"; version="0.6-1"; sha256="13f48nflz6b3dk1d22ndfn22sdkz1rzhbh8c85lxk23qhfyc6fv6"; depends=[]; }; @@ -10503,9 +10529,10 @@ in with self; { mrds = derive2 { name="mrds"; version="2.2.1"; sha256="1prhzyps4sckl24d4fpmkafiawx8c0xdwiixn9fa3i2cxv9ia6hd"; depends=[mgcv numDeriv optimx Rsolnp]; }; mreg = derive2 { name="mreg"; version="1.1"; sha256="06la0yy2yys161jhlzlcm5lcv0664wm6sa8gjdnpd1s1nx52jkqf"; depends=[]; }; mregions = derive2 { name="mregions"; version="0.1.6"; sha256="0ix77hqcllhcpldchlnvciiflm6ysylynnnqvczpf8vx7gwa3lrk"; depends=[data_table httr jsonlite rappdirs sp tibble wellknown xml2]; }; + mrf2d = derive2 { name="mrf2d"; version="0.2.0"; sha256="0h8v4iyz24pi2md6l5kcdnhksafjqr41xqrxxyly4nfx4fqz16s7"; depends=[dplyr ggplot2 Rcpp RcppArmadillo Rdpack reshape2]; }; mrfDepth = derive2 { name="mrfDepth"; version="1.0.11"; sha256="0x4z4agwbzlyzbkf6aj7y9061cm05dvhzpg05wc7k59xbq1ns1sv"; depends=[abind geometry ggplot2 matrixStats Rcpp RcppArmadillo RcppEigen reshape2]; }; mrfse = derive2 { name="mrfse"; version="0.1"; sha256="156qy6g2s6cxyd1ijzn709jniml6308gdzvkzcks5q6s7gs9sl2m"; depends=[]; }; - mrgsolve = derive2 { name="mrgsolve"; version="0.10.0"; sha256="1z2i3sl5s6z1pk3fy324zfm9gpdzr1g4af2fhrwhsdk97l6580ij"; depends=[BH dplyr magrittr Rcpp RcppArmadillo rlang tibble tidyselect]; }; + mrgsolve = derive2 { name="mrgsolve"; version="0.10.1"; sha256="19l6xvqax8gk9gy6svdhap61hprd6h7gv046isqsy03cv65hbkhq"; depends=[BH dplyr glue lifecycle magrittr Rcpp RcppArmadillo rlang tibble tidyselect]; }; mri = derive2 { name="mri"; version="1.0.1"; sha256="1dssq556kid6c3djp0s6v853cranv2wjs2c9521l5ykg5g33hfmv"; depends=[]; }; mritc = derive2 { name="mritc"; version="0.5-1"; sha256="12sfyw5b1lryczl92xvyvhl37qfx3ybg4y9awsl0b7f51zi0lzy3"; depends=[lattice misc3d oro_nifti]; }; mro = derive2 { name="mro"; version="0.1.1"; sha256="00gc2hd8q5hb2xrswclcqqw1gxl83zmpma6bhsggg3kppsw1dpjv"; depends=[MASS matrixcalc]; }; @@ -10520,9 +10547,9 @@ in with self; { mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; }; mscstts = derive2 { name="mscstts"; version="0.5.2"; sha256="1zvicr1c9lh7cscbx7j5d98zkjwq7piggyz6ssz19gpp2gfc4igy"; depends=[httr jsonlite tuneR]; }; mscsweblm4r = derive2 { name="mscsweblm4r"; version="0.1.2"; sha256="031s00wpr9zfjpii56m67q1phn05vqlhb8cfzhyf6fbrxvpb8k7n"; depends=[httr jsonlite pander]; }; + msd = derive2 { name="msd"; version="0.1.0"; sha256="03j50vq8mypidxzplznsa874inh5zy2v9rbw9yd7wsxwi8jf0s2b"; depends=[]; }; msda = derive2 { name="msda"; version="1.0.2"; sha256="05khpa5qasnngn6yvk87gv5262plqpw4knb6hzgy52w401k0y80r"; depends=[MASS Matrix]; }; msde = derive2 { name="msde"; version="1.0.4"; sha256="1jyvsadkha4976vdf8nn2dbrsymr4n932cqrkmhawmy6pxa2c45g"; depends=[Rcpp RcppArmadillo RcppProgress]; }; - mseapca = derive2 { name="mseapca"; version="1.0"; sha256="115njdk8cv55zxd38hq9qaca686ykckni0f3xl8w3bn32gb5g9a7"; depends=[XML]; }; msgl = derive2 { name="msgl"; version="2.3.9"; sha256="0793d12cd1mcnr97byhfwpnvm329w78f56n7dcs4116hlizp8l9h"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; msgpackR = derive2 { name="msgpackR"; version="1.1"; sha256="0a6vm4q1zfy8wlvhl9wfy09ig1iag9fvjasz5w9bll7idky4ldx5"; depends=[]; }; msgps = derive2 { name="msgps"; version="1.3.1"; sha256="0r8i0sw412jr148bid8sfpjcfbkf5589dqcqyvf5cm84cj7axnpz"; depends=[]; }; @@ -10531,7 +10558,7 @@ in with self; { msir = derive2 { name="msir"; version="1.3.2"; sha256="0pvc3q162vqq3k39nni732x05zzfz4y9y2zf56d83185ypszv9kb"; depends=[mclust]; }; msltrend = derive2 { name="msltrend"; version="1.0"; sha256="1rwy77ijf3hzq2zp47cijwvqcq34rdlfxwhrd9l56bvmlmzr1dqx"; depends=[changepoint forecast plyr Rssa tseries zoo]; }; msm = derive2 { name="msm"; version="1.6.8"; sha256="1d32y8f0vb2dfv3999liigpns788j145nrvd1xpxb9i2lsg8mwgk"; depends=[expm mvtnorm survival]; }; - msma = derive2 { name="msma"; version="2.0"; sha256="15g8cwafbd5bsff3cd53yzgxacsswgl0rzygr40drs7nwsi4qbk1"; depends=[mvtnorm]; }; + msma = derive2 { name="msma"; version="2.1"; sha256="1k1xfbwyapwjs7bp9v0vrdfrz54hsyxh562xni1n8m61l4gwkvzx"; depends=[mvtnorm]; }; msme = derive2 { name="msme"; version="0.5.3"; sha256="0mq57zdas1s87nblnvbif9lisgahfhvmabglvp9imr1mvpwybpbh"; depends=[lattice MASS]; }; msmtools = derive2 { name="msmtools"; version="1.3"; sha256="0p7xpj78cjc1s015ma7vc38kqiy6wvpyixrdinx4ngig1pqfrq4p"; depends=[data_table msm survival]; }; msos = derive2 { name="msos"; version="1.1.1"; sha256="0jp4xw03iwc6dkk93kkky9k6xd285ylzp1x7jxkl3h0884jvyjyf"; depends=[mclust tree]; }; @@ -10549,10 +10576,10 @@ in with self; { mtsdi = derive2 { name="mtsdi"; version="0.3.5"; sha256="0j4hl690n8x7zfpygw5qv0m0jyl8dnz1d3r4314w06h7c578n2kp"; depends=[gam]; }; muHVT = derive2 { name="muHVT"; version="1.0.1"; sha256="0qxfnnz88h00a2zfx0kagv7g4w3ck74x1zqcmxgrvwpdy3z851zn"; depends=[conf_design deldir dplyr ggplot2 gtools Hmisc magrittr MASS plyr polyclip purrr rgeos sp splancs]; }; muRL = derive2 { name="muRL"; version="0.1-12"; sha256="1nzi0nyspva5ach0q0rvlljlfgmac8vxxggkwdzz1pr1cxhkprwd"; depends=[maps stringr]; }; - muRty = derive2 { name="muRty"; version="0.3.0"; sha256="1125182flpz6a90dh3gldyhlnh9l605cb59b92j3d0p754ansdrm"; depends=[clue lpSolve]; }; + muRty = derive2 { name="muRty"; version="0.3.1"; sha256="0v7wfb6347h4inf9jcbp6n4xfsqjzgj0i5sdfgqmbw0d5pcpnvhz"; depends=[clue lpSolve]; }; muStat = derive2 { name="muStat"; version="1.7.0"; sha256="18727xj9i9hcnpdfnl1b9wd6cp7wl1g74byqpda2gsrcardl57wz"; depends=[]; }; muckrock = derive2 { name="muckrock"; version="0.1.0"; sha256="16lm1iiaaws7clby7qgblqdiznw6abjjgvsxlfpza7l2xdvplxpg"; depends=[]; }; - mudata2 = derive2 { name="mudata2"; version="1.1.0"; sha256="094xvcw80grfz1q8al8pcnz14drf69amyn3phpav90znnk6b9bhn"; depends=[dplyr fs ggplot2 glue jsonlite lubridate magrittr readr rlang stringr tibble tidyr tidyselect withr]; }; + mudata2 = derive2 { name="mudata2"; version="1.1.1"; sha256="1hp5fg050kj00ikdy7y55y23r6rr574gxk60nr801cdkp4hzyr46"; depends=[dplyr fs ggplot2 glue jsonlite lubridate magrittr readr rlang stringr tibble tidyr tidyselect withr]; }; mudens = derive2 { name="mudens"; version="1.3.2"; sha256="18kv8xfmmmk0dyw64lwrlrks0gana0s7gaff6nxs59ndgb1pj6yp"; depends=[Rcpp survival]; }; mudfold = derive2 { name="mudfold"; version="1.1.2"; sha256="1g66axwrrvlsb03yhwa16pvxbl2wvpm7fzzl6nlw0cxlh99w7r33"; depends=[boot broom dplyr ggplot2 glmnet mgcv reshape2 zoo]; }; mueRelativeRisk = derive2 { name="mueRelativeRisk"; version="0.1.1"; sha256="16yclfmgxc32pv00vyb9fjdh4syax8ynizr8a29haiq22q5fqclh"; depends=[]; }; @@ -10579,27 +10606,29 @@ in with self; { multicastR = derive2 { name="multicastR"; version="1.3.0"; sha256="07y3a7apk6pjnfqki52jc5vbzb1w53fla7wcpc184f4zpqfc783q"; depends=[curl data_table gsubfn stringi XML xml2 xtable]; }; multichull = derive2 { name="multichull"; version="1.0.0"; sha256="1gc7kxxlbanc6rmmbf6h85jf7kj0a78h23m5vwwqqliv018qsv2n"; depends=[igraph plotly shiny shinythemes]; }; multicmp = derive2 { name="multicmp"; version="1.1"; sha256="0mz7ksc5h6dy95l3kbsamm191372blhlrj573krc57bj93lmp1a5"; depends=[numDeriv]; }; - multicolor = derive2 { name="multicolor"; version="0.1.3"; sha256="0jniqa8zrl13534pyl200i54m52lhfwq7h7irf806ga70lvfgk0k"; depends=[cowsay crayon dplyr glue magrittr purrr stringi stringr tibble tidyr]; }; + multicolor = derive2 { name="multicolor"; version="0.1.4"; sha256="1yswpqm62cvpfj6zxrprbvamjah3zxhsvn19qgpqmha0098lx5g2"; depends=[cowsay crayon dplyr glue magrittr purrr stringi stringr tibble tidyr]; }; multicon = derive2 { name="multicon"; version="1.6"; sha256="16glkgnm4vlpxkhf1xw1gl1q10yavx9479i21v29lldag35z8pqx"; depends=[abind foreach mvtnorm psych sciplot]; }; multicool = derive2 { name="multicool"; version="0.1-11"; sha256="0xk408qbz9cxwf51j3pmy55gcjcnws8mc6j3vyn9zhramxj7x40w"; depends=[Rcpp]; }; multicross = derive2 { name="multicross"; version="2.0.0"; sha256="1ic632ig0mzvq00hrkjs8vfa5mzp8vwrqflfqfdr5wkdvcqqnhbb"; depends=[AnnotationDbi crossmatch MASS Matrix nbpMatching org_Ce_eg_db org_Hs_eg_db org_Mm_eg_db Seurat]; }; multifluo = derive2 { name="multifluo"; version="1.1"; sha256="1hnh1gj6lfnh2fn0v064bszydgsr6p9f7p8yxyw5rdxfrxymiw09"; depends=[agricolae ellipse imager]; }; multifwf = derive2 { name="multifwf"; version="0.2.2"; sha256="1l6z3pzz6g6w1spp1f918jh6w0jm93qyc882rj8jhn1198d2s8nd"; depends=[]; }; - multigraph = derive2 { name="multigraph"; version="0.92"; sha256="1wxia62qjy94cbcpf85nyxba6gb9d9607pkqhgy2dc5dyhhw61vs"; depends=[multiplex]; }; - multigroup = derive2 { name="multigroup"; version="0.4.4"; sha256="1r79zapziz3jkd654bwsc5g0rphrk9hkp1fpik8jvjsa1cix40mq"; depends=[MASS]; }; + multigraph = derive2 { name="multigraph"; version="0.93"; sha256="1966c38y7a7ik1a0sn3vcprckjphz7xvd6hkq3nhf4xdarbnwrxv"; depends=[multiplex]; }; + multigroup = derive2 { name="multigroup"; version="0.4.5"; sha256="1d3m2c3md9iiv1gfqfyik1xj3fsas85bmf2vbkaks8ljxa42f55k"; depends=[MASS]; }; multilaterals = derive2 { name="multilaterals"; version="1.0"; sha256="11zfdhn6qzqz0n31g23bn40wnfzkjndb753iiqvihirphzb74v5v"; depends=[ape igraph]; }; multilevel = derive2 { name="multilevel"; version="2.6"; sha256="19zrvpq23dn69d7kai1rgw5b8ibmgybnbg6isliq0n8bv9jvrzia"; depends=[MASS nlme]; }; multilevelPSA = derive2 { name="multilevelPSA"; version="1.2.5"; sha256="0926jaicdxk846vyfphb2hyg3zan3wal44x1bwamws0zf4flc4hj"; depends=[ggplot2 MASS party plyr PSAgraphics psych reshape xtable]; }; - multilinguer = derive2 { name="multilinguer"; version="0.0.3"; sha256="0j7v0d0xibxk8ir09pxb3v13xlm7h35phhgw2cxfd934z146x8v9"; depends=[askpass fs rstudioapi rvest sys usethis xml2 zip]; }; + multilevelTools = derive2 { name="multilevelTools"; version="0.1.1"; sha256="01fzx7j0mkb4fr7axv34184w6w5nfsdcr51nscci1mi5b2805x1s"; depends=[cowplot data_table extraoperators ggplot2 JWileymisc lavaan lme4 lmerTest nlme zoo]; }; + multilinguer = derive2 { name="multilinguer"; version="0.0.4"; sha256="0kavgvbzv8bvv9qlr92j8mx7b802w513mqalrdyln0pw36c9i13x"; depends=[askpass fs rstudioapi rvest sys usethis xml2 zip]; }; + multimark = derive2 { name="multimark"; version="2.1.2"; sha256="15qdj3h5j30i56yx089pq8iii5kkk3ay6xr6z2msk22zj1rv7ahh"; depends=[Brobdingnag coda Matrix mvtnorm prodlim raster RMark sp statmod]; }; multimode = derive2 { name="multimode"; version="1.4"; sha256="142k2jbi6y9aaqz9cwl4wk2m1y1n1fgvk873nk3psdv2h6r77slx"; depends=[diptest ks rootSolve]; }; multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; }; multinet = derive2 { name="multinet"; version="3.2"; sha256="00v0ac3pizdf8r6sm45hdrpj487pgcw9snf26zqcyhhlx5b8wicz"; depends=[igraph RColorBrewer Rcpp]; }; multinets = derive2 { name="multinets"; version="0.2.2"; sha256="1i5jsq1xy0g0l5d1z3hz4gj6inj4rhd6lf2s5xzd5k8ccp5aba8c"; depends=[igraph Rcpp]; }; multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; }; multinomineq = derive2 { name="multinomineq"; version="0.2.1"; sha256="09h5nccfcrnl78rdxwsw5cqirfq40a6x4dmpkibc475z3xndk2rm"; depends=[coda quadprog Rcpp RcppArmadillo RcppProgress RcppXPtrUtils Rglpk]; }; - multipanelfigure = derive2 { name="multipanelfigure"; version="2.0.2"; sha256="0f24b0msx6y9ccdi65d8rxf589vw5rz6pxwa55bivq8cy5s4gc27"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types ggplot2 gridGraphics gtable magick magrittr stringi]; }; - multipleNCC = derive2 { name="multipleNCC"; version="1.2-1"; sha256="080wpyifpw41p6jip2ia7439jdhzyb7lbhs2qzzg0hn6c0qq7mrr"; depends=[mgcv survival]; }; - multiplex = derive2 { name="multiplex"; version="2.9.2"; sha256="1qwxyzm4i33siybh65qny6bbmv039kdp7mfd5cbbx252qrz9379s"; depends=[]; }; + multipanelfigure = derive2 { name="multipanelfigure"; version="2.1.2"; sha256="0cm5bd7k0fx6d3gybcll6vvh14byanyk6dj4civqij7psa48iagc"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types ggplot2 gridGraphics gtable magick magrittr stringi]; }; + multipleNCC = derive2 { name="multipleNCC"; version="1.2-2"; sha256="0bnc14l5b3x68qnwf3ma8wrclmp6n7fxsc0sbd7cfaayhp8dzcb1"; depends=[mgcv survival]; }; + multiplex = derive2 { name="multiplex"; version="2.9.4"; sha256="0c1gpmh1jric8zzip5m3fr8wjxiqa7jhfklgdni22shlccnjxn33"; depends=[]; }; multipol = derive2 { name="multipol"; version="1.0-7"; sha256="1rkrg3kayxa05jayg8bk1mm3hcvi76570wqfja5953hd9j4krgha"; depends=[abind]; }; multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; }; multiselect = derive2 { name="multiselect"; version="0.1.0"; sha256="1cda38zq7c1r56wdfpr5dg0jfw4kzi9p7jq59qm04j461j9ag3q6"; depends=[Hmisc]; }; @@ -10620,7 +10649,7 @@ in with self; { mumm = derive2 { name="mumm"; version="0.2.1"; sha256="1wjg2pqn2wb9hk9mqgpi3k26qwjnkmp4apx09lxcwrz35bbwhfzv"; depends=[lme4 Matrix Rcpp RcppEigen stringr TMB]; }; munfold = derive2 { name="munfold"; version="0.3.5"; sha256="17zizx9r0f8dxb7dkgn1nn0fp7ydy6r155p1zfz0v93jc26lc1hb"; depends=[MASS memisc]; }; munsell = derive2 { name="munsell"; version="0.5.0"; sha256="16g1fzisbpqb15yh3pqf3iia4csppva5dnv1z88x9dg263xskwyh"; depends=[colorspace]; }; - munsellinterpol = derive2 { name="munsellinterpol"; version="2.5-1"; sha256="1x5nh4h35mkajsdgi4vrvs1cd4iagdrp9al2a6lll96jw0y1c65y"; depends=[rootSolve spacesRGB spacesXYZ]; }; + munsellinterpol = derive2 { name="munsellinterpol"; version="2.6-1"; sha256="02fj62hfxg2zvkbmlqxka5j9mkc7j07czqhs18wbcz38kamfgw2j"; depends=[rootSolve spacesRGB spacesXYZ]; }; murphydiagram = derive2 { name="murphydiagram"; version="0.12.2"; sha256="0f699cdfsl4f9w9f18cxkdlq1vyhsv83ynl6ck0r3wwh8f1zsmnd"; depends=[]; }; music = derive2 { name="music"; version="0.1.1"; sha256="04ygmlga7i8bpxcrlmj8wc956asf73krghga6fnh2flm675dp42f"; depends=[audio crayon]; }; musicNMR = derive2 { name="musicNMR"; version="0.0.2"; sha256="09xxc78ajk428yc3617jfxqp5fy89nfc24f1rig6cw28fflwqj0k"; depends=[seewave]; }; @@ -10634,20 +10663,18 @@ in with self; { mvMORPH = derive2 { name="mvMORPH"; version="1.1.1"; sha256="101ds24bir84yj7cnc4l4yv85xga981mk5ap420f3r9lp8db3h6x"; depends=[ape corpcor glassoFast pbmcapply phytools spam subplex]; }; mvMonitoring = derive2 { name="mvMonitoring"; version="0.1.0"; sha256="03nvq8nmrmrpzyxlsqzww5ghk640115l1jgmgwfahhjxkdpkzfxx"; depends=[BMS dplyr lazyeval plyr rlang robustbase xts zoo]; }; mvPot = derive2 { name="mvPot"; version="0.1.4"; sha256="04l9dn8amwp366b6lic5fkl4kck0x2m3xcsqz6as4c3h772nhq1w"; depends=[evd gmp MASS numbers]; }; - mvProbit = derive2 { name="mvProbit"; version="0.1-8"; sha256="07dizclqjlwj29yb3xwjihjh8kmn6jiq5cpf8rcirylzykfdv3wk"; depends=[abind bayesm maxLik miscTools mvtnorm]; }; mvQuad = derive2 { name="mvQuad"; version="1.0-6"; sha256="016477dhjdkqiadc631vzpbp967mn4yli6by3s1k348mlfirwsi3"; depends=[data_table statmod]; }; - mvSLOUCH = derive2 { name="mvSLOUCH"; version="2.2"; sha256="1df9lwj9f65sw8jd2cxjg08p6z9llpxjzyjcryn764a4ncnx7gf3"; depends=[abind ape Matrix matrixcalc mvtnorm ouch PCMBase TreeSim]; }; + mvSLOUCH = derive2 { name="mvSLOUCH"; version="2.4"; sha256="06bpg2pp3kq9bvr4ab3c0ma7bxb56k514dgqvc3n6pfvavcgxkvf"; depends=[abind ape Matrix matrixcalc mvtnorm ouch PCMBase TreeSim]; }; mvShapiroTest = derive2 { name="mvShapiroTest"; version="1.0"; sha256="0zcv5l28gwipkmymk12l4wcj9v047pr8k8q5avljdrs2a37f74v1"; depends=[]; }; - mvabund = derive2 { name="mvabund"; version="4.0.1"; sha256="0la935gsiryfc0zixxr1dqj0av271x96pqxbi3bp6dksbw5gm68k"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; + mvabund = derive2 { name="mvabund"; version="4.1.3"; sha256="1z58h4dk3mc2hfnfvc7pghk471cbp7ah2s1z2ria5igw4s80962b"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; mvbutils = derive2 { name="mvbutils"; version="2.8.232"; sha256="0awd0jy492ha321c20kmmgl20kqphdmrmswakc0rq6h8z9d55kdg"; depends=[]; }; mvc = derive2 { name="mvc"; version="1.3"; sha256="0kmh6vp7c2y9jf71f4a29b0fxcl0h7m4p8wig4dk3fi7alhjf7ym"; depends=[rattle]; }; mvcluster = derive2 { name="mvcluster"; version="1.0"; sha256="0yfl31scdgsiljvpv1yxc5bwwzr6kbhpjwqh2kql7xf0m0hc1pr4"; depends=[Rcpp RcppArmadillo]; }; mvctm = derive2 { name="mvctm"; version="1.2"; sha256="0810bmk748cvbls4djspqvkk65j605djqicqg4rkwy2a799l3rgc"; depends=[Formula MNM nlme quantreg Rfit SpatialNP]; }; mvdalab = derive2 { name="mvdalab"; version="1.4"; sha256="18wchy517qd45w5y0sr8lcafb7kmscy0q9vsryk9if6x2jq22lqz"; depends=[car dummies ggplot2 MASS moments penalized plyr reshape2 sn]; }; mvglmmRank = derive2 { name="mvglmmRank"; version="1.2-2"; sha256="00zxqby8syb959fqgw9i7b0yamgjwddq32jlin6qmnzys5bg1556"; depends=[MASS Matrix numDeriv]; }; - mvgraphnorm = derive2 { name="mvgraphnorm"; version="1.81"; sha256="14sfnm0pikv82abiqfv2m1bziwyy2r0bmhq64j783cyppv5fb69z"; depends=[bnlearn corpcor igraph Matrix mvtnorm qpgraph]; }; mvinfluence = derive2 { name="mvinfluence"; version="0.8-3"; sha256="0nygsldkm61ny5ljcc1r667rywj239j4x59ssi81cb2005kkjgm5"; depends=[car heplots]; }; - mvmesh = derive2 { name="mvmesh"; version="1.5"; sha256="0my43559jh8ln1fx5rh5vw24vr6kxpd2h5scylfxfv2qfk794l0b"; depends=[abind geometry rcdd rgl SimplicialCubature]; }; + mvmesh = derive2 { name="mvmesh"; version="1.6"; sha256="1y6p7xp9fv0xswjdc6py1xqlx1ys1iyr559s9wkyja4hzcpya2my"; depends=[abind geometry rcdd rgl SimplicialCubature]; }; mvmeta = derive2 { name="mvmeta"; version="1.0.3"; sha256="08zki4bxd7l5hpa9dly9jw796kn4rfv6v6gmx21yvfppyryrvmvd"; depends=[mixmeta]; }; mvnTest = derive2 { name="mvnTest"; version="1.1-0"; sha256="0p37skzpljzz19x1hwh2hbxqins19zkbz7nlgfws5pgp9apazafq"; depends=[MASS mvtnorm]; }; mvna = derive2 { name="mvna"; version="2.0.1"; sha256="10i42hjm5bk62c20pmxhya283yzw1902ivkflmyqy79jri266dxf"; depends=[lattice]; }; @@ -10660,11 +10687,12 @@ in with self; { mvoutlier = derive2 { name="mvoutlier"; version="2.0.9"; sha256="1d562h3xicq962h27fi95qhrz9vkwxk0p8axhps1cy4b49w4bygi"; depends=[robCompositions robustbase sgeostat]; }; mvp = derive2 { name="mvp"; version="1.0-8"; sha256="0i2fd9s0dlpaa4vwkiq5is2d4vxc90hkdl0yk57gl651i8nxwnha"; depends=[magic magrittr mpoly partitions Rcpp]; }; mvprpb = derive2 { name="mvprpb"; version="1.0.4"; sha256="1kcjynz9s7vrvcgjb9sbqv7g50yiymbpkpg6ci34wznd33f7nrxm"; depends=[]; }; + mvrsquared = derive2 { name="mvrsquared"; version="0.0.3"; sha256="1bnfw8524zwlcixr7dmhm0liijs7fjxv1a8jrnrd6hzih04a9h6j"; depends=[Matrix Rcpp RcppArmadillo]; }; mvrtn = derive2 { name="mvrtn"; version="1.0"; sha256="0k0k76wk5zq0cjydncsrb60rdhmb58mlf7zhclhaqmli1cy697k8"; depends=[]; }; mvsf = derive2 { name="mvsf"; version="1.0"; sha256="1krvsxvj38c5ndvnsd1m18fkqld748kn5j2jbgdr3ca9m3i5nlwf"; depends=[mvnormtest nortest]; }; mvst = derive2 { name="mvst"; version="1.1.0"; sha256="03q0kdychsmn4wcn50b6dqhxn4f2mjvrr5rac942xdv75w8qklc9"; depends=[MCMCpack mnormt mvtnorm]; }; - mvtmeta = derive2 { name="mvtmeta"; version="1.0"; sha256="0g0d4lrz854wkd0dz5aiad54i46aqkfhsq6cpbsfv0w5l2kwiqqz"; depends=[gtools]; }; - mvtnorm = derive2 { name="mvtnorm"; version="1.0-12"; sha256="03rfmii9j8x8fjv7hp8qd28z0svl4w0x54k2f4jpwv4qa7079i24"; depends=[]; }; + mvtmeta = derive2 { name="mvtmeta"; version="1.1"; sha256="0s0s5922c5rs8cqk100nci3akqnhbvibm2n2gn8049v3qcyfajyb"; depends=[gtools]; }; + mvtnorm = derive2 { name="mvtnorm"; version="1.1-0"; sha256="0pfb6qk4yb6xaya8i1wvx6dnc3jj4s2g94sq2kzv4p8zn4pf24l1"; depends=[]; }; mvtsplot = derive2 { name="mvtsplot"; version="1.0-1"; sha256="0g5grrha77rsnkfasw5pxnpmkl7vgb728ms8apyg8xnbmgilg9vv"; depends=[RColorBrewer]; }; mwa = derive2 { name="mwa"; version="0.4.1"; sha256="0bd4i1zzwmcsrm2bg14f528yav5hb6qxcd7x4i5rwdcx1hlx27bw"; depends=[cem MASS rJava]; }; mwaved = derive2 { name="mwaved"; version="1.1.7"; sha256="0g0yddsgdfyvqaj59qi6k3sknpbppdmgvq0rgnil5q8ki5skvgis"; depends=[Rcpp shiny]; }; @@ -10675,26 +10703,28 @@ in with self; { mycor = derive2 { name="mycor"; version="0.1.1"; sha256="00hqmvga22bv43833s974s7ky7lbry3r2bb5kza7kvkn1p6773rg"; depends=[lattice]; }; myepisodes = derive2 { name="myepisodes"; version="1.1.1"; sha256="0xk9bwgpl630nhc8qa2pc0rwqbqk3haxnp78gfxq6sn6z7i44k1p"; depends=[XML]; }; mztwinreg = derive2 { name="mztwinreg"; version="1.0-1"; sha256="1rg6ikaqdrc7q44s3r3km8h45prnvcpzpxd7nxbmh209iz9j19ai"; depends=[mclogit rms]; }; - n1qn1 = derive2 { name="n1qn1"; version="6.0.1-3"; sha256="1k13x4h2rbcra3b8873ymvn4bgj6psaw05ba0hac0spymbp01fzi"; depends=[Rcpp RcppArmadillo]; }; + n1qn1 = derive2 { name="n1qn1"; version="6.0.1-6"; sha256="1xlp5j2fnmbc2aqlgf4ybcvpfvmxmg84v7fxfwz0dliclc7sysa7"; depends=[Rcpp RcppArmadillo]; }; nCDunnett = derive2 { name="nCDunnett"; version="1.1.0"; sha256="0q2db1pixqr0wbx4bd05c98i1p0vgaqsfa1iwjxr08c62a5xhkks"; depends=[]; }; nCal = derive2 { name="nCal"; version="2018.8-20"; sha256="1idgpzivw5wa423z86rf60ri50cyh8p38p4r493i9b2m9qzzqf1x"; depends=[drc gdata gWidgets kyotil]; }; nCopula = derive2 { name="nCopula"; version="0.1.1"; sha256="03qbfvx0lg9prg52fk1jxar2bng2x6scac4g2c64kvp6vmf6x4mv"; depends=[copula Deriv stringi stringr]; }; nFCA = derive2 { name="nFCA"; version="0.3"; sha256="1jyyzagmppm3i7vh3ia4ic0zql1w04f66z81v0zpdihd4cbl5ra7"; depends=[]; }; nFactors = derive2 { name="nFactors"; version="2.3.3.1"; sha256="0qylbwn064smdw2adyx1hxwy4m320g78ihllfnss4kkmxk0ki05z"; depends=[boot lattice MASS psych]; }; + nJira = derive2 { name="nJira"; version="0.1.1"; sha256="0vh167kxljp68f0dx307wl6fp8nlp34vgrkr815z30mhx03p8j9r"; depends=[httr plyr rjson]; }; nLTT = derive2 { name="nLTT"; version="1.4.3"; sha256="0gpmlvam7k4gsiidblfl4f57mgkbq2pakzqak4yx4pxa9f8gpilm"; depends=[ape coda deSolve testit]; }; nVennR = derive2 { name="nVennR"; version="0.2.1"; sha256="11qkwd8laf67iqyzx3ia424vykvsvy0k9d7labdgqfx2ihd95hh2"; depends=[Rcpp]; }; na_tools = derive2 { name="na.tools"; version="0.3.1"; sha256="1lbzsckfg297n85kzbin65x1l6qgg9l50hd3xi2gflxc7n2xb8bw"; depends=[]; }; naaccr = derive2 { name="naaccr"; version="1.0.0"; sha256="1hw74a2gjm3gxq0s0qlndhqw0vij6p31walz1ic741z7hqsffqq7"; depends=[data_table stringi]; }; nabor = derive2 { name="nabor"; version="0.5.0"; sha256="1nj39cdfwrmhgsi3cq8imxv3n6xzc1v6dzdb2cf2hybjk368v4s7"; depends=[BH Rcpp RcppEigen]; }; nadiv = derive2 { name="nadiv"; version="2.16.2.0"; sha256="0gvpl8jrczk9afc7qg6w8w0gn28nia5mh3vanlsp7j0kj3vzqqc5"; depends=[Matrix]; }; - naivebayes = derive2 { name="naivebayes"; version="0.9.6"; sha256="1rmpc7ynnl909m20njdy5nc7siqqlj5xra3ry41b0pgb966ijcdz"; depends=[]; }; - naivereg = derive2 { name="naivereg"; version="1.0.2"; sha256="11prmwb6jc0la4w2qlmbr9n529sn4mv3zm9h80svg6gs119a9yb0"; depends=[gmm grpreg ncvreg]; }; + naijR = derive2 { name="naijR"; version="0.0.7"; sha256="1q93y959b2r8gf5ccw897kk3ky7i7mc6wrcspnpaipznrc4pnidi"; depends=[mapdata maps]; }; + naivebayes = derive2 { name="naivebayes"; version="0.9.7"; sha256="070m78d8hsbqfbapb6g8vvh91gyznqfdpqsaq6z3raps8zlybsag"; depends=[]; }; + naivereg = derive2 { name="naivereg"; version="1.0.5"; sha256="1cxfl419pp7xh1xrad29gvpn6hm0rhk40vylj97ypndh6gmnynzz"; depends=[glmnet gmm grpreg ncvreg]; }; nakagami = derive2 { name="nakagami"; version="1.0.0"; sha256="1i9m1nlqfdk9k3bzf8qlfc11spzfqly49n1pk7phvykzjgd1c1s4"; depends=[assertthat]; }; - namedCapture = derive2 { name="namedCapture"; version="2019.7.30"; sha256="12cnd16015ig0qx41gfkf7915iyzlaa7ixdv72x9vx3rylw86y4q"; depends=[]; }; + namedCapture = derive2 { name="namedCapture"; version="2020.3.2"; sha256="00i23w98hl5p0fcczmsflg6hscnj9n2qhp1pbv4xppdry9aczr6h"; depends=[]; }; namer = derive2 { name="namer"; version="0.1.5"; sha256="1687x6rc46bp2bmqkixzry5cc7lxjqwjk8ngrbg2fk7mzb4pwvnq"; depends=[dplyr fs glue magrittr purrr rstudioapi tibble]; }; namespace = derive2 { name="namespace"; version="0.9.1"; sha256="1bsx5q19l7m3q2qys87izvq06zgb22b7hqblx0spkvzgiiwlq236"; depends=[]; }; - nandb = derive2 { name="nandb"; version="2.0.5"; sha256="0y1lw79mpvyfbxfzjrdfnpgny4s2axbl23gl67fj45jrbjh56wxz"; depends=[assertthat autothresholdr BBmisc checkmate detrendr dplyr filesstrings ggplot2 glue ijtiff magrittr purrr Rcpp reshape2 rlang stringr viridis withr]; }; - naniar = derive2 { name="naniar"; version="0.4.2"; sha256="0qy3wgb4wixn01yyhbjf0dmx5xq42m4c3d46y2ysfj59181p39lm"; depends=[dplyr forcats ggplot2 glue magrittr purrr rlang tibble tidyr UpSetR viridis visdat]; }; + nandb = derive2 { name="nandb"; version="2.0.6"; sha256="0gxpm22lmjbh63cifii5hwrh4wgk3f58wvp0frj5ns9jyfl6k4ik"; depends=[assertthat autothresholdr BBmisc checkmate detrendr dplyr filesstrings ggplot2 glue ijtiff magrittr purrr Rcpp reshape2 rlang stringr viridis withr]; }; + naniar = derive2 { name="naniar"; version="0.5.0"; sha256="0n0x7s7rd7zwp0jrzwl6c246yha514nwn77avd5iiq53kwypnlg9"; depends=[dplyr forcats ggplot2 glue magrittr purrr rlang tibble tidyr UpSetR viridis visdat]; }; nanop = derive2 { name="nanop"; version="2.0-6"; sha256="007gdc93pk0vpfmsw7zgfma2k1045n2cxwwsyy276smy0ys9fdhp"; depends=[distrEx rgl]; }; nanostringr = derive2 { name="nanostringr"; version="0.1.4"; sha256="1g1hm5kz2bl3qqs2cz4nhvmak7mbh5pry34lp6lwnbxrgi97i1iz"; depends=[assertthat ccaPP dplyr epiR magrittr purrr rlang]; }; nanotime = derive2 { name="nanotime"; version="0.2.4"; sha256="115i9v3h2fakq14jfc0yf7i96xvy8qas4qvmp0s9digy6ms7xyrd"; depends=[bit64 RcppCCTZ zoo]; }; @@ -10704,18 +10734,19 @@ in with self; { nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; }; nasapower = derive2 { name="nasapower"; version="1.1.3"; sha256="1grfbj68vxsy50a0zylgfddwgr3ilrk2v60755vra9ckpmnf31zi"; depends=[APSIM crul curl jsonlite lubridate readr tibble]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; - nat = derive2 { name="nat"; version="1.8.13"; sha256="12n81jzlzamnpkf5inczfc1x8qmfibszpkakpyc0q7r7wgpykbgv"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; + nat = derive2 { name="nat"; version="1.8.14"; sha256="02v1hvxsp3z7rday2mr5f52kkyszcl3ind3p8vllyl705s3ci2ll"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; nat_nblast = derive2 { name="nat.nblast"; version="1.6.5"; sha256="0fp01rrvz7n84sdmfhi0wzd9mvg7wi682l4qg5dj82cm98v80l3p"; depends=[dendroextras nabor nat plyr rgl spam]; }; nat_templatebrains = derive2 { name="nat.templatebrains"; version="0.9"; sha256="0r0ydhxnax4x4gwp60bgarhgp59g4sis7msa3rq4kddv8qdi3gix"; depends=[digest igraph memoise nat rappdirs rgl]; }; nat_utils = derive2 { name="nat.utils"; version="0.5.1"; sha256="12g87ar795xfbz7wljksb24x9hqvcirjr50y4mbpx1427r0l7clv"; depends=[]; }; nationwider = derive2 { name="nationwider"; version="1.1.0"; sha256="01hp8igbvbn1qa203cdnlwnfzymjifzmzcyfaszzf9q4f17f07r8"; depends=[dplyr httr lubridate magrittr readxl rvest stringr tidyr xml2 zoo]; }; + natmanager = derive2 { name="natmanager"; version="0.4.0"; sha256="03vqy6kwc749ccydmjwjl49sydg534ijn0kpm11s4jp6nmybgzsa"; depends=[curl gh remotes usethis withr]; }; natserv = derive2 { name="natserv"; version="0.3.0"; sha256="0plfcf9c1lwfmac3nnx07hyhpr12q6mfmmj0dz8xyxdspd2ps81w"; depends=[crul data_table tibble xml2]; }; natural = derive2 { name="natural"; version="0.9.0"; sha256="0zxwbf3gg2h0bhl2w0md3rd162vlsgg0dv3187hc0ax7333cc4cx"; depends=[glmnet Matrix]; }; naturalsort = derive2 { name="naturalsort"; version="0.1.3"; sha256="0mz801y9mzld9ypp3xmsjw2d8l9q97sdnv09wrci9xi3yg2sjf6d"; depends=[]; }; nbc4va = derive2 { name="nbc4va"; version="1.1"; sha256="025p9h1ghrsq4h439gx25ffpyvh2kp1i51hm7kbzx8nmh4ka8aff"; depends=[]; }; nbconvertR = derive2 { name="nbconvertR"; version="1.3.2"; sha256="0yhmz177r1miain65vspclahhz8cg7638ldbpsw8ylgf7a60l0sg"; depends=[]; }; nbpMatching = derive2 { name="nbpMatching"; version="1.5.1"; sha256="0f90k9vq05gkc0sgywb98frig63df0ih4z41dq7m2inx1zk5rqns"; depends=[Hmisc MASS]; }; - nc = derive2 { name="nc"; version="2019.10.19"; sha256="1z8v8i2bvqj1vdhijxabv0rw6ammfgzxxmwax1ywcka9jr0x1fnw"; depends=[data_table]; }; + nc = derive2 { name="nc"; version="2020.2.27"; sha256="0g3vfcfg0g6vjkaj1rqs359rq40hrsf2v6l5d79nw5bb44yz7l7k"; depends=[data_table]; }; ncappc = derive2 { name="ncappc"; version="0.3.0"; sha256="0bf00iskrd3x43839bwn957mi3qvm2dhcmqa7hl1ib0gp2r1cnzx"; depends=[bookdown Cairo dplyr ggplot2 gridExtra gtable knitr lazyeval magrittr PopED purrr readr reshape2 rlang rmarkdown scales tibble tidyr xtable]; }; ncar = derive2 { name="ncar"; version="0.4.2"; sha256="12cz4mlcmg8vdcn6747q1vz20wyypf89jq3nzx17s3aki0vlnwmj"; depends=[NonCompart rtf]; }; ncbit = derive2 { name="ncbit"; version="2013.03.29"; sha256="0f07h8v68119rjvgm84b75j0j7dvcrl6dq62vp41adlm2hgjg024"; depends=[]; }; @@ -10723,19 +10754,20 @@ in with self; { ncdf4 = derive2 { name="ncdf4"; version="1.17"; sha256="1xls44ln2zjrrlimxl8v4bk2ni3g45c9j0gxdnjx31rikmrc95fv"; depends=[]; }; ncdfgeom = derive2 { name="ncdfgeom"; version="1.1.0"; sha256="19gbpf19vjzfigi9awhqjx6zsv92h4w1lg3dps3sgaibym9lq3zk"; depends=[dplyr ncmeta RNetCDF sf]; }; ncdump = derive2 { name="ncdump"; version="0.0.3"; sha256="09g98mzpky32z41jf23ahzhyv34l34y1gqq99j2hl4pqlvvhxs9i"; depends=[dplyr ncdf4]; }; - ncf = derive2 { name="ncf"; version="1.2-8"; sha256="1j2q1dqhr8xk9fhzjkpnx8ff427d1m8qr07l2zj5lwyh9wbr1jzn"; depends=[]; }; + ncf = derive2 { name="ncf"; version="1.2-9"; sha256="0wxn004jn4wba2zqnfrd513pw4mjxkmk4n1xj829nxadn1zbkcax"; depends=[]; }; ncg = derive2 { name="ncg"; version="0.1.1"; sha256="1jzkzp61cc5jxmdnl867lcrjjm7y2iw9imzprbd098p1j3w8fvj7"; depends=[]; }; ncmeta = derive2 { name="ncmeta"; version="0.2.0"; sha256="1qrb2mnb4qjgx1ss1zwz7z034xrb9p0w0q9mqdh6rg4qgdsfhdxh"; depends=[dplyr rlang RNetCDF tibble tidyr]; }; ncodeR = derive2 { name="ncodeR"; version="0.2.0.1"; sha256="1pxiqxhq2rxs8rxxhw1hbds7z2qkf7ws26a8wsbw815yn6jm10n8"; depends=[cli R6 rhoR]; }; ncpen = derive2 { name="ncpen"; version="1.0.0"; sha256="0vl4cbrsifr5s1691gacmp0lk3aqyq0yfafafzv6g3zygi4igrsa"; depends=[Rcpp RcppArmadillo]; }; - ncvreg = derive2 { name="ncvreg"; version="3.11-1"; sha256="09s8k8gqsnwm6f5x1rr1f32pzam67migxwkbj4lfvw85v3pljdmr"; depends=[]; }; + ncvreg = derive2 { name="ncvreg"; version="3.11.2"; sha256="047z848chp1c10ijhw50a9mkjhhi9pd8d21c7jc9h9r2q3zgkixq"; depends=[]; }; ndjson = derive2 { name="ndjson"; version="0.8.0"; sha256="0lvzbgfi1sg4kya1mvv67z14qk3vz9q57x22qh57xq8ampdkg812"; depends=[data_table Rcpp tibble]; }; ndl = derive2 { name="ndl"; version="0.2.18"; sha256="0b235v6jf98rrqp5aqw3jkk7mq8dbqmhb758zbzza1mavh4n2k7s"; depends=[Hmisc MASS Rcpp]; }; ndtv = derive2 { name="ndtv"; version="0.13.0"; sha256="1qfjvq5wch256gmg7pw9jwda33r4963a8p8jmp27cmpzdwycvnzy"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; nearfar = derive2 { name="nearfar"; version="1.2"; sha256="116rq797a5fascirz8xg465fywjf40j1k5czryvqzpik0if0w00r"; depends=[car GenSA MASS nbpMatching]; }; neariso = derive2 { name="neariso"; version="1.0.1"; sha256="1b2gnws75kkqsi8mg9n0zzdaawx57a6zz47cswabj5m6nb09ikh8"; depends=[]; }; neat = derive2 { name="neat"; version="1.2.1"; sha256="0ifx2qbr8g6myz380rwayas26vg13wkblssvma4kbgfksw7cccgj"; depends=[igraph]; }; - neatRanges = derive2 { name="neatRanges"; version="0.1.0"; sha256="0g6b5mi57ajqwn8s09rw1njc1v4lrqy5dcnlphwx9i89lfa8lbah"; depends=[data_table]; }; + neatRanges = derive2 { name="neatRanges"; version="0.1.2"; sha256="08zwld4pkfgw4xqn1saakqp1p062y9a1hb0ilj9lirqzj7x5iz8q"; depends=[data_table Rcpp]; }; + neatStats = derive2 { name="neatStats"; version="1.0.4"; sha256="0fh06q7136azsl0ml0f67vgw90pqcpp0b57r1gmq9f5kwjbwg1yy"; depends=[BayesFactor bayestestR Exact ez ggplot2 MBESS pROC]; }; neatmaps = derive2 { name="neatmaps"; version="2.1.0"; sha256="1kz1na3fzpd8vkxmpp5rz8ksyf8q2wk456csiii82winv9a2zxc9"; depends=[ConsensusClusterPlus dplyr ggplot2 heatmaply igraph]; }; needmining = derive2 { name="needmining"; version="0.1.1"; sha256="0qsj0ihjchrnl4s44rpsizbcz033z00dmzvic2y1msv0bnfawl6p"; depends=[randomForest rtweet SnowballC SparseM stringr tau tm]; }; needs = derive2 { name="needs"; version="0.0.3"; sha256="16dkjpijz3rz7kd5ggxsdg55iwd42nll1vk6g5ix4xdbqrx6cp9x"; depends=[]; }; @@ -10743,17 +10775,16 @@ in with self; { negenes = derive2 { name="negenes"; version="1.0-12"; sha256="0b82822vl86gni0pv5f6pjfzmks35i7q2rqkhgyb9z9c677g991q"; depends=[]; }; neighbr = derive2 { name="neighbr"; version="1.0.2"; sha256="1l85x3p4h2z2npj1xqggviyd3kvkgni5cnx5p3g52s9jwqrj43kb"; depends=[]; }; neldermead = derive2 { name="neldermead"; version="1.0-11"; sha256="0gf9rfwz48sadl6960mpfb6a3l9n5p28yq3n0a9vz8mr57vh1dzg"; depends=[optimbase optimsimplex]; }; + neo2R = derive2 { name="neo2R"; version="2.0.0"; sha256="1a85wqsc1qrqrxc25pxr23y4kw8rxfn8xj3fng437d1kh4m6sdgq"; depends=[base64enc jsonlite RCurl]; }; neo4r = derive2 { name="neo4r"; version="0.1.1"; sha256="0s4rjhn2mc8ca4p8p474a83dc277vrf7l968xwxkiac0d4fgbra7"; depends=[attempt data_table glue httr igraph jsonlite magrittr purrr R6 rlang rstudioapi shiny tibble tidyr tidyselect]; }; neonUtilities = derive2 { name="neonUtilities"; version="1.3.3"; sha256="1lmk2h58ablfggyicyhndw3n74lrpb7zcp5y1nh24i0mkqrf6gfm"; depends=[data_table downloader dplyr gdata httr jsonlite lubridate pbapply plyr readr stringr tidyr]; }; neotoma = derive2 { name="neotoma"; version="1.7.4"; sha256="1fknzp7qg5l5lkfvqfld0x67zj3xmi8vivsg70m47mbpcs92hmcf"; depends=[analogue dplyr httr jsonlite leaflet plyr reshape2 xml2]; }; nephro = derive2 { name="nephro"; version="1.2"; sha256="1izmzx8lah322xzb42asfnrvr2c9yqd0zf7fmrhwd3p4rr1rqa7d"; depends=[]; }; - nesRdata = derive2 { name="nesRdata"; version="0.3.0"; sha256="06wnm1bv7i2r6sj2hyk1zypwhr3ir89gh2bkd6kmhb7s5wv6cd5v"; depends=[dplyr purrr rappdirs readr]; }; nestfs = derive2 { name="nestfs"; version="1.0"; sha256="0lzbjj287s5kmw9635gfyl3jdgfh5mxbwxqxmnwynbwccixk0akc"; depends=[dgof pROC]; }; - netCoin = derive2 { name="netCoin"; version="1.1.23"; sha256="0v5ia8iwn7i21a5xa6wjnm1pn1z1y0ccbg6qqnfzg01x1d751s5q"; depends=[haven igraph Matrix]; }; + netCoin = derive2 { name="netCoin"; version="1.1.24"; sha256="14g7b5z1l5hc30pchwlyrgh6ggzfiq7n07h4yznz64cb459ishrh"; depends=[haven igraph Matrix]; }; netSEM = derive2 { name="netSEM"; version="0.5.1"; sha256="0k4ngl4p1v2rp1sf2x65m7p0cd6ha98fyx21b73ki0531q0d9fil"; depends=[DiagrammeR DiagrammeRsvg gtools htmlwidgets knitr magrittr MASS png rsvg segmented svglite]; }; netassoc = derive2 { name="netassoc"; version="0.6.3"; sha256="1hyshnbpq60a3y13b4sh1c2rk78x09q01b7q6xrgv10w7bn9r2sg"; depends=[corpcor huge igraph infotheo vegan]; }; - netchain = derive2 { name="netchain"; version="0.1.0"; sha256="187pgsp6dn15n9bx9sj1pjx8wyfp2cs5s89s72hclanic479pv4g"; depends=[gtools igraph Matrix Rcpp stringr]; }; - netcoh = derive2 { name="netcoh"; version="0.2"; sha256="0q60hvyparlwdww6as6hcdzfs6q3n8z1rfpj53r5q2s77x6q07xx"; depends=[Matrix Rcpp RcppArmadillo]; }; + netchain = derive2 { name="netchain"; version="0.2.0"; sha256="1skpf1n6a17mjkcxqpl6vrskk04yvqa0v4n2zw9x5r1h46q9m6qk"; depends=[gtools igraph Matrix Rcpp stringr]; }; netcom = derive2 { name="netcom"; version="1.0.4"; sha256="0fka14sffm0p1gldk27fd62ng05spfpbn665b4w5hdf1z4z0bs20"; depends=[clue expm igraph Matrix pdist pracma vegan]; }; netdep = derive2 { name="netdep"; version="0.1.0"; sha256="0mrbqn5d8iqvs98a0kski0vya135z7l902xafya96s2h288jchx7"; depends=[igraph igraphdata MASS mvrtn]; }; netgen = derive2 { name="netgen"; version="1.3.2"; sha256="1yqi4rb6w9ipxgbl1j1s2s81cg7nzrn65irn5gs82hsq94d6vv2j"; depends=[BBmisc checkmate ggplot2 igraph lhs mvtnorm stringr]; }; @@ -10766,7 +10797,7 @@ in with self; { nets = derive2 { name="nets"; version="0.9"; sha256="1wcr0fj50w3rqxw0k9cb81c2psdkb0dwwwzrjvxv50hksbhyi8kn"; depends=[igraph]; }; netstat = derive2 { name="netstat"; version="0.1.1"; sha256="1h87cl3ry5hwwqxza3n24zpvwn89hhclsa2400sw4ijdy2ivpn2j"; depends=[]; }; network = derive2 { name="network"; version="1.16.0"; sha256="0dnf1wl3za2lhx2lwd8smhlijl1cfhckgr8zz9piiirrfi2m2kx2"; depends=[magrittr tibble]; }; - networkABC = derive2 { name="networkABC"; version="0.5-3"; sha256="0f3wbm76i8m9f52b0zvb2fvziqh43xy67llnv4lm54yj5szxvjr0"; depends=[network RColorBrewer sna]; }; + networkABC = derive2 { name="networkABC"; version="0.7-0"; sha256="0vn5hgry4i1dzgp34vdfa6wifsz54jh05avs9xrbzg6zmf1y2cif"; depends=[network RColorBrewer sna]; }; networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; }; networkDynamic = derive2 { name="networkDynamic"; version="0.10.1"; sha256="183cnxbcly887vmxcvyvwcn19i8s7yyb57k1q5vhimx8vvcxivi2"; depends=[network statnet_common]; }; networkDynamicData = derive2 { name="networkDynamicData"; version="0.2.1"; sha256="176al8jp0gha6yzhyn5flmyackmmdnh1h8sasqrdcmba7ha7cya6"; depends=[network networkDynamic]; }; @@ -10775,38 +10806,39 @@ in with self; { networkTomography = derive2 { name="networkTomography"; version="0.3"; sha256="1hd7av231zz0d2f9ql5p6c95k7dj62hp0shdfshmyfjh8900amw7"; depends=[coda igraph KFAS limSolve plyr Rglpk]; }; networkreporting = derive2 { name="networkreporting"; version="0.1.1"; sha256="1ssbz8lw4mlwcblwfbyffvayvb2gmihq4qlz5q9222fn4aa3raxd"; depends=[dplyr functional ggplot2 lazyeval plyr reshape2 stringr surveybootstrap]; }; networksis = derive2 { name="networksis"; version="2.1-3"; sha256="1kvil3qs7xd94ak9jgvj1nss55gjg0y7d35zmass9h1hjkcrq7bg"; depends=[network]; }; - networktools = derive2 { name="networktools"; version="1.2.1"; sha256="0s7xcan0qkzpri6r2jm6c1d62f5lx88m3wa2rgkn1mvdq0sh3igg"; depends=[cocor eigenmodel ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet psych qgraph R_utils RColorBrewer reshape2 smacof wordcloud]; }; - networktree = derive2 { name="networktree"; version="0.2.1"; sha256="1fl2zh5b7avkkp4c34szrm37fp7jamn54vzyhrzamjd3jqr32hmy"; depends=[Formula gridBase Matrix mvtnorm partykit qgraph]; }; + networktools = derive2 { name="networktools"; version="1.2.2"; sha256="1j6jqz02lgafykfdnvv4zgpglhijyhirc9zgjl7pj930wmnpy9p4"; depends=[cocor eigenmodel ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet psych qgraph R_utils RColorBrewer reshape2 smacof wordcloud]; }; + networktree = derive2 { name="networktree"; version="0.2.2"; sha256="0dlci3sqdh6f3w82h0p6c2pn15d170m9ls8zllgscd1sbyry4k4x"; depends=[Formula gridBase Matrix mvtnorm partykit qgraph reshape2]; }; neuRosim = derive2 { name="neuRosim"; version="0.2-12"; sha256="1hsnw9xipdr74fydq9013252ycbi9igh28s0j4dbdx52pv3iixzl"; depends=[deSolve]; }; neural = derive2 { name="neural"; version="1.4.2.2"; sha256="05hrqgppgwp38rdzw86naglxj0bz3wqv04akq7f0jxbbjc6kwy4j"; depends=[]; }; neuralnet = derive2 { name="neuralnet"; version="1.44.2"; sha256="09l808vgjh059a3f94vgsprfyp5c1hrbjn6i1cn34cxnbljwsrjz"; depends=[Deriv MASS]; }; neurobase = derive2 { name="neurobase"; version="1.29.0"; sha256="16y1d4qg4d57l43080vlpn5jnh462qnv9z0w6dv0zwlk74psm9ha"; depends=[abind matrixStats oro_nifti R_utils RNifti]; }; neuroblastoma = derive2 { name="neuroblastoma"; version="1.0"; sha256="0hs87fvwaq53xxbh2dw3hjsmf1zkyqli9qyacxf72fnkyhhl8b45"; depends=[]; }; + neurocInstall = derive2 { name="neurocInstall"; version="0.12.0"; sha256="1fkb6ji9gigqdjl50hbgdgfidqpjgqlh1aidf6vn4qnfr92bsvqf"; depends=[devtools]; }; neurohcp = derive2 { name="neurohcp"; version="0.8.1"; sha256="01q9dkrpmwfj4r7is97f3lsmn84vm5qpvf44zfm1a6hhpxa0n7z0"; depends=[base64enc digest httr xml2]; }; neuroim = derive2 { name="neuroim"; version="0.0.6"; sha256="00cjr6pkip6zi2d0q3qbn3lb3k0z82v6c19qslvgpa9n0g63dr5p"; depends=[abind assertthat hash iterators Matrix Rcpp readr rgl stringr yaImpute]; }; neuropsychology = derive2 { name="neuropsychology"; version="0.5.0"; sha256="0hlbjf8hxz4cl7fvg9mbyfmcyyxncc2nh9h1mrd2yzgrpgn0d0b5"; depends=[BayesFactor caret dplyr ggcorrplot ggplot2 Hmisc htmlTable lme4 MuMIn png ppcor psych stringi tidyr tidyverse tm wordcloud2]; }; neutralitytestr = derive2 { name="neutralitytestr"; version="0.0.2"; sha256="1p1zjc3fiphkxflsyzrxx8af98aa0gp9pvby63mmrsjb0z7ps948"; depends=[cowplot dplyr ggplot2 ggpmisc pracma scales]; }; - neverhpfilter = derive2 { name="neverhpfilter"; version="0.2-0"; sha256="0m4gbqnjw2nmhf25svznlf6pd0b0mslk52lpirmlj1iv04w1aq1i"; depends=[xts zoo]; }; + neverhpfilter = derive2 { name="neverhpfilter"; version="0.3-1"; sha256="1x2sc9v40hrlg60v3887a680359zdql9c7n8y97dh7v8w7mw547x"; depends=[xts zoo]; }; newTestSurvRec = derive2 { name="newTestSurvRec"; version="1.0.2"; sha256="06p782md33wqh5wa1735yg5i01d42p74kl7h5qhqs9cd732ls6pz"; depends=[]; }; newsanchor = derive2 { name="newsanchor"; version="0.1.1"; sha256="1s8qhq9jk5gnsimnvy7kdayya0ks0ly309l7zxm5rafj5x7k5vwn"; depends=[askpass devtools httr jsonlite lubridate tidyr xml2]; }; - newsmap = derive2 { name="newsmap"; version="0.7.0"; sha256="1fhpkih37i4abrv9ili1vpwk4pgmnhq5d5flqjdi025h9gb0zq8y"; depends=[Matrix quanteda stringi]; }; + newsmap = derive2 { name="newsmap"; version="0.7.1"; sha256="0cm9xrpsvhxlqvnqp7r44gx2rzy50hsvmqdlriw0yqd3fp9357qd"; depends=[Matrix quanteda stringi]; }; ngram = derive2 { name="ngram"; version="3.0.4"; sha256="1q4y64dy7vcjikbfx20fpdiy1kwvxay4y90xr5j8d8zkqnva0way"; depends=[]; }; ngramrr = derive2 { name="ngramrr"; version="0.2.0"; sha256="1p8s4p3h27g647rxx9qjfad5dzbngjbmvhw4gz0jbsmfqrsf72by"; depends=[tau tm]; }; ngspatial = derive2 { name="ngspatial"; version="1.2-1"; sha256="1c65ws9b9s2grr44lqg8026c4p2875d0426dfmrakpb44mw2zppp"; depends=[batchmeans Rcpp RcppArmadillo]; }; - ngstk = derive2 { name="ngstk"; version="0.2.3"; sha256="0196hnbqw9bji3bl2phjs9z5n84x5fs7iiirfd6gjyqv9xlfwd2p"; depends=[configr data_table future optparse stringi stringr]; }; nhanesA = derive2 { name="nhanesA"; version="0.6.5"; sha256="0bb53s379qrm8xqp4bsi5vgk6v6hvwadzjv09pvdp1n45z7rqj86"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; nhdR = derive2 { name="nhdR"; version="0.5.2"; sha256="0qi7ls10pdjcihkdnhbvbnv8dwcy1448pd5fzhpy0kjky7hfi7bj"; depends=[curl dplyr foreign gdalUtils ggplot2 httr maps memoise purrr rappdirs rgdal rlang rvest sf stringr units xml2]; }; nhdplusTools = derive2 { name="nhdplusTools"; version="0.3.12"; sha256="0111yy4pqxhqz7lk30zm7lryzarpjlxnvkzvix630xzvms8jkx1n"; depends=[dplyr httr igraph jsonlite magrittr prettymapr R_utils RANN rosm sf tidyr units xml2]; }; nhds = derive2 { name="nhds"; version="1.0.3"; sha256="1cgw3hmsik3vlnb1lgalhvhrqzwdv08dp80vwpw1nwbf8whcbxjn"; depends=[]; }; - nhlscrape = derive2 { name="nhlscrape"; version="0.1.2"; sha256="06k7pabyz0nbx1z6p2d3cymf6jph4gxa4fhzfgqzzqg9ai5kmccq"; depends=[DBI httr jsonlite RSQLite rvest xml2]; }; + nhlscrape = derive2 { name="nhlscrape"; version="0.1.3"; sha256="0x6y747j6lha3jw4v2wavgd12xw5nx4m8biv9rmq9z0qy53vncjc"; depends=[DBI httr jsonlite RSQLite rvest xml2]; }; nhm = derive2 { name="nhm"; version="0.1.0"; sha256="1yf9hnbmfb7xj8mbhnq40wvd0pd88x9qspy1jr3x0n8nb75i3jlp"; depends=[deSolve maxLik mvtnorm]; }; nhstplot = derive2 { name="nhstplot"; version="1.0.1"; sha256="1f07gfmbx80as54mlzdbs2z1vzc78rjy6i6m7zd4jplgcqdcynws"; depends=[ggplot2]; }; nice = derive2 { name="nice"; version="0.4-1"; sha256="1p8vmimiq9sbjvbx6c2wqwwkpnzw4kkdvjry6qyadmm3frwhj5qb"; depends=[]; }; nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; }; + nichevol = derive2 { name="nichevol"; version="0.1.19"; sha256="0qj5cb0fyw0x1bczl6l0kl6jqir4yg8sb9fsfkd3h64d0ls2arl5"; depends=[ape castor concaveman geiger raster rgdal rgeos sf sp stringr]; }; nilde = derive2 { name="nilde"; version="1.1-3"; sha256="0h88if7dh16inyy5zh0yjqmc0c57k99la038p5vlwkj62vvjscmm"; depends=[]; }; - nima = derive2 { name="nima"; version="0.6.1"; sha256="0rfb624pap2ga19vll6hbvjh2jr8dh3i1bj1h8qpqpb5nk6lkf4x"; depends=[assertthat dplyr ggplot2 ggthemes gridExtra gtools scales]; }; + nima = derive2 { name="nima"; version="0.6.2"; sha256="0n8r8h1m0v0ssbpv6p32jby49f45qbicwr0awm7x054p48qk49cy"; depends=[assertthat dplyr ggplot2 ggthemes gridExtra gtools scales]; }; nimble = derive2 { name="nimble"; version="0.9.0"; sha256="04anz8xfkdv2c00hax305lycp0gzjspsq34hfgm3w51kz6nqzhpb"; depends=[coda igraph R6]; }; - nimbleEcology = derive2 { name="nimbleEcology"; version="0.1.0"; sha256="195g1hcx7fyqx2la2ci88m2bykcnzrv27k4q4qq3z69c54fc5p7d"; depends=[nimble]; }; + nimbleEcology = derive2 { name="nimbleEcology"; version="0.2.0"; sha256="0c8qs5j1n4fag8gw095rabmc619dwv9qyfzix29djjc4wr638xsd"; depends=[nimble]; }; nipals = derive2 { name="nipals"; version="0.7"; sha256="14rq54qy4gc4l9f5h48vrsrh7sb0wzzxbvjn0zax82pz2fw6nybx"; depends=[]; }; nitrcbot = derive2 { name="nitrcbot"; version="1.2"; sha256="0lainbw9j5aj9s824afpxdjl3q2f728jfpdfji7kpi9hdg8jixhx"; depends=[dplyr httr jsonlite RCurl]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; @@ -10818,17 +10850,17 @@ in with self; { nlgeocoder = derive2 { name="nlgeocoder"; version="0.1.3"; sha256="13d30kfgfsny5gnn3yjfnclky6yixaa8sg0m689rszqxrvbrj79x"; depends=[jsonlite]; }; nlirms = derive2 { name="nlirms"; version="3.4.4"; sha256="1njyfip377a0f6hf9y32s077b4jv4h8ydbjgnl68yfypxbfn2xyx"; depends=[gridExtra gtable]; }; nlist = derive2 { name="nlist"; version="0.1.0"; sha256="0i5appxx79fcv2g0frkzlv2yfym6kmmzbsk76rbh7ap8hram04jg"; depends=[abind chk coda purrr term]; }; - nlme = derive2 { name="nlme"; version="3.1-143"; sha256="13iixbs2ibldc75rl7rav5n5kx33zwm33xnfw1yvlkpcqf38bd22"; depends=[lattice]; }; + nlme = derive2 { name="nlme"; version="3.1-145"; sha256="1i9a3afdmn2ziks0imz0j09ay9n0zb9mhrymy9mg97vvlz5diwrh"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; - nlmixr = derive2 { name="nlmixr"; version="1.1.1-3"; sha256="04gm74mjwz8fidapk0040fghy4wpj19412n54v8wli10xjwwb76w"; depends=[BH brew cli crayon digest dparser fastGHQuad flextable generics ggplot2 huxtable lattice lbfgs lbfgsb3c magrittr Matrix memoise minqa n1qn1 nlme R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders stringr sys tidyr vpc yaml]; }; + nlmixr = derive2 { name="nlmixr"; version="1.1.1-7"; sha256="1dl3f0lns8cm32gx64i2jims4wknannl776mn2spzqh5z6g3nnzw"; depends=[BH brew cli dparser fastGHQuad flextable generics ggplot2 huxtable lbfgsb3c magrittr Matrix memoise n1qn1 nlme Rcpp RcppArmadillo RcppEigen RxODE StanHeaders stringr tidyr vpc yaml]; }; nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; }; - nloptr = derive2 { name="nloptr"; version="1.2.1"; sha256="15yz60kljxwnhm2m3gryjzxl3ynhkhd5jiwc179b1hz6rlzf71hz"; depends=[]; }; - nlpred = derive2 { name="nlpred"; version="1.0.0"; sha256="0a13agsacn7qw2i8ggd9v8w7k44r4faby1vv163gsa764ppj70m4"; depends=[assertthat bde cvAUC data_table np Rdpack ROCR SuperLearner]; }; + nloptr = derive2 { name="nloptr"; version="1.2.2.1"; sha256="1bhh2v14phzndjhiq7yw9vych6vzn5yy3vk9q35zcp3jhjjbwdyh"; depends=[]; }; + nlpred = derive2 { name="nlpred"; version="1.0.1"; sha256="05jna8hzd5v36a0dwag6zr8ms1pkryas3qarwb946bkxlslffp27"; depends=[assertthat bde cvAUC data_table np Rdpack ROCR SuperLearner]; }; nlraa = derive2 { name="nlraa"; version="0.53"; sha256="064mbajrpwm2pkiyb9lwmhhf3gxzkixay3vdz9lgfd3rr9gfrk06"; depends=[knitr nlme]; }; nlreg = derive2 { name="nlreg"; version="1.2-2.2"; sha256="0gkcxg5m287axhvkl00xy26vidawhhb1ii1s13rh49v0yccwvvqh"; depends=[statmod survival]; }; nlrr = derive2 { name="nlrr"; version="0.1"; sha256="09wm8s5sadkhkq9pb3fjk66cb2xn8py46w1d7yp7fjhczh31bjsq"; depends=[Hmisc rms]; }; - nlrx = derive2 { name="nlrx"; version="0.4.0"; sha256="0b5szfg20szzip6ylafgv94nx34dp4qcyg83lcip0kvz597ymd66"; depends=[crayon dplyr EasyABC furrr genalg GenSA igraph lhs magrittr purrr raster readr rstudioapi sensitivity sf stringr tibble tidyr XML]; }; + nlrx = derive2 { name="nlrx"; version="0.4.1"; sha256="1p29x6ayf3daahn8addh6xfrwl45rsllf4vx1k8l7hqwgxfa73rl"; depends=[crayon dplyr EasyABC furrr genalg GenSA igraph lhs magrittr purrr raster readr rstudioapi sensitivity sf stringr tibble tidyr XML]; }; nls_multstart = derive2 { name="nls.multstart"; version="1.0.0"; sha256="08zdyx5hp1xbqjspk0f89fca5gc0b5j87hsccvn9dxn2lrnwk8nb"; depends=[dplyr minpack_lm purrr tibble tidyr]; }; nls2 = derive2 { name="nls2"; version="0.2"; sha256="0k46i865p6jk0jchy03jiq131pc20h9crn3hygzy305rdnqvaccq"; depends=[proto]; }; nlsMicrobio = derive2 { name="nlsMicrobio"; version="0.0-1"; sha256="0676n78265z00dacmq593c9l2239ii574djm9s7i7w8jk1kdhzx2"; depends=[nlstools]; }; @@ -10843,36 +10875,36 @@ in with self; { nlt = derive2 { name="nlt"; version="2.2-1"; sha256="10wf00qzf28dxjfvv12wsqxlfn6xz15wk8njrzgsgm9px1g6s21f"; depends=[adlift EbayesThresh]; }; nltm = derive2 { name="nltm"; version="1.4.2"; sha256="02f3rn5l1hfvjpymy7vljmh6iq9w1w96016kx75qw563zwhmp5kx"; depends=[survival]; }; nlts = derive2 { name="nlts"; version="1.0-2"; sha256="0s49qjwavl9ns2746nn4zy4h4dh0njfcvznm3qd61qhs7np9w1db"; depends=[acepack locfit]; }; - nmaINLA = derive2 { name="nmaINLA"; version="0.1.2"; sha256="0layk1pqry2g3xiwmasrnsvmw91sgg7iz15d6iz6hbq4za61hr0k"; depends=[]; }; nmadb = derive2 { name="nmadb"; version="1.2.0"; sha256="17r5vc57ilhy6cfcqpfyp9nzzjaa5gc8qkgfn3y8sppqh1g1mi40"; depends=[devtools jsonlite RCurl readxl]; }; nmathresh = derive2 { name="nmathresh"; version="0.1.4"; sha256="0nsywahzph06c7grk3ch65fvll4ninqz97y007d6qdqgmym9vxjq"; depends=[ggplot2 gridExtra gtable Matrix nnls]; }; nmfem = derive2 { name="nmfem"; version="1.0.5"; sha256="0hlddml20bp38yp1dji3l9mc1vnzmdrj6myf19n9p9xb85a30b9c"; depends=[capushe d3heatmap dplyr mixtools plyr tidyr]; }; nmfgpu4R = derive2 { name="nmfgpu4R"; version="0.2.5.2"; sha256="05066rgbbp6kj2d67nzf3d1pf32gypz9ammz4ba88yxblydb3cwk"; depends=[Matrix Rcpp SparseM stringr]; }; nmixgof = derive2 { name="nmixgof"; version="0.1.0"; sha256="0cbwrsxrcf8pn4ycn6r0z8jdidw5l6kdvwyrks69fq4pjzx988d6"; depends=[Rcpp unmarked]; }; - nmslibR = derive2 { name="nmslibR"; version="1.0.3"; sha256="1m3bq0vg774kqragdx1ydm4q2if3yn9llbd6ybv3c8bmbdb9h405"; depends=[KernelKnn Matrix R6 Rcpp RcppArmadillo reticulate]; }; + nmslibR = derive2 { name="nmslibR"; version="1.0.4"; sha256="1fw565n4128nswl2qx248ab60is98iqijq5blwskxc9hjddf95a4"; depends=[KernelKnn Matrix R6 Rcpp RcppArmadillo reticulate]; }; nmw = derive2 { name="nmw"; version="0.1.4"; sha256="1vj7b2p40x0h3xp45qzar86i9439mj8y3r5hnlbwa025jqdf2g0q"; depends=[numDeriv]; }; + nnGarrote = derive2 { name="nnGarrote"; version="1.0.2"; sha256="1rci3m362wlis8z9afbkcr9vk0ihvay389cq4c8jd9gmcwdrv61g"; depends=[caret glmnet multicool]; }; nnTensor = derive2 { name="nnTensor"; version="1.0.2"; sha256="12h25kn3d70ldlqpd4nqnycv3mnzfx1f9gcw1yaspmnhs1x6gddf"; depends=[fields plot3D rTensor tagcloud]; }; nna = derive2 { name="nna"; version="0.0.2.1"; sha256="17cz1jf7iv61wspqldfdwbdjhlr0wq09idkzlivfb8aik5w9f0z5"; depends=[]; }; - nnet = derive2 { name="nnet"; version="7.3-12"; sha256="17amqnw9dpap2w8ivx53hxha2xrm0drwfnj32li0xk41hlz548r7"; depends=[]; }; + nnet = derive2 { name="nnet"; version="7.3-13"; sha256="1z0rj5cm4ycw1y0gd5wwwg8c2298v90iybgqdqh17967jbi2125f"; depends=[]; }; nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; }; nnfor = derive2 { name="nnfor"; version="0.9.6"; sha256="0bciy6k79g7abvj3pmmdc4wzg5mp11zgmdbx17x4by993p2clhw9"; depends=[forecast glmnet MASS neuralnet plotrix tsutils uroot]; }; - nngeo = derive2 { name="nngeo"; version="0.3.0"; sha256="056xsffd7sn430lqmjsisk04929d44zqnwyikcdp46zhqyqpnk2m"; depends=[igraph lwgeom RANN raster Rcpp sf sp stars units]; }; + nngeo = derive2 { name="nngeo"; version="0.3.4"; sha256="0wmr0s8mn9fkriqr5c94rzqvj4iq87p9m0cfc0i97zwv68g958yy"; depends=[lwgeom RANN sf stars units]; }; nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; }; nnls = derive2 { name="nnls"; version="1.4"; sha256="07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"; depends=[]; }; noaaoceans = derive2 { name="noaaoceans"; version="0.2.0"; sha256="1hvjkma14kl8f69ichk27ddxlg9cqnzif8x43ckxyny6h341bbkf"; depends=[httr jsonlite rvest xml2]; }; noaastormevents = derive2 { name="noaastormevents"; version="0.1.1"; sha256="1ra852r5hw1ng3f4jk866jx0z2dszwvbidmfrdjchv9bfrjwmlmx"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 htmltab hurricaneexposure lubridate maps plyr RColorBrewer rlang stringr tidyr viridis XML]; }; - noctua = derive2 { name="noctua"; version="1.5.0"; sha256="0r6fwrvhss64hp6kpk2qg9pawav3sfapxqj65fm32zi8643ly5hc"; depends=[data_table DBI paws]; }; + noctua = derive2 { name="noctua"; version="1.6.0"; sha256="1gdlfjgxrhkdp8klis2rz60hvldw5qlzhrcp8frbyjvb8qa83b76"; depends=[data_table DBI paws]; }; nodbi = derive2 { name="nodbi"; version="0.4.0"; sha256="1jlqzj9lv9wnsb8hwy8y91369i6ykp8av35abakfpxg0302svay9"; depends=[data_table jsonlite]; }; nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; }; nofrills = derive2 { name="nofrills"; version="0.3.0"; sha256="18hryq6clywlr2f45az6ryslkkarly45nacln4bwk6ip0yfl5s98"; depends=[rlang]; }; noia = derive2 { name="noia"; version="0.97.1"; sha256="0yldfmnb4ads4s9v9cj1js8zf1w1hxasqq6qjyzwknmvmp7kh62h"; depends=[]; }; noise = derive2 { name="noise"; version="1.0"; sha256="1a48s9vpz3nc058966lad8hydmg7z0vbzfwcf6nxc9g3c8mw4nig"; depends=[preprocessCore]; }; noisyCE2 = derive2 { name="noisyCE2"; version="1.0.0"; sha256="11cf7b472i6lsb4kh04rhp5mhj7l8ig0kxmkz05kazkr6cs41s6i"; depends=[magrittr]; }; - nomclust = derive2 { name="nomclust"; version="1.1.1106"; sha256="17hb89k72sw3ya0wm3n95mpx4vj7mpl4mzs8qwl2773dh2mcjgjq"; depends=[cluster dummies]; }; - nomisr = derive2 { name="nomisr"; version="0.4.1"; sha256="0a94s1xqij6k2kkzdzxp5837qgv9czzgl6wp0z9a95xizy3hkjsx"; depends=[dplyr httr jsonlite readr rlang rsdmx tibble]; }; + nomclust = derive2 { name="nomclust"; version="2.1.4"; sha256="02zmkcv41zbbdz62wmrg4hj7dqcp5q8bd0rwyaq57p4630lcv02m"; depends=[cluster plyr]; }; + nomisr = derive2 { name="nomisr"; version="0.4.3"; sha256="0p1vc6qzs7lyflw9jndimylv614dny27nz18xkmay2419vwh463f"; depends=[dplyr httr jsonlite readr rlang rsdmx snakecase tibble]; }; nomnoml = derive2 { name="nomnoml"; version="0.1.0"; sha256="0yzbs9by2fvwvxpl2xzjikzcjv8dvcr5v2v82ibz5jpnnsbl1ac4"; depends=[htmlwidgets png webshot]; }; nomogramEx = derive2 { name="nomogramEx"; version="3.0"; sha256="16235rwblnzn8k53817llwy2pzhnpifh6ij159nxymjm8ar9qpbp"; depends=[pracma rms]; }; - nomogramFormula = derive2 { name="nomogramFormula"; version="1.1.0.0"; sha256="1cblsxyyizsjz079qlbvhmb51n2cmxxsrh1ca7xwxc0zj6ihg02w"; depends=[rms]; }; + nomogramFormula = derive2 { name="nomogramFormula"; version="1.2.0.0"; sha256="1j6g5kndl0n2g8acwq8pn09sk0bjcsphbcd77ha1j5dnwdmy73c0"; depends=[do Hmisc rms]; }; noncompliance = derive2 { name="noncompliance"; version="0.2.2"; sha256="1lcybgj95z7lz7p26xbsdiv0vvms4ab4f8kad0pclacf1l43v0j6"; depends=[data_table Rcpp]; }; noncomplyR = derive2 { name="noncomplyR"; version="1.0"; sha256="1a9m6r9cizw42nmy24jdsrsbllg5z84fs8b239axnh1fxzskg2qy"; depends=[MCMCpack]; }; nonet = derive2 { name="nonet"; version="0.4.0"; sha256="1043vplj8libbzll172h82dfwnz2lsdba5na2g9liryg8p08h4v8"; depends=[caret dplyr e1071 ggplot2 glmnet pROC purrr randomForest rlang rlist tidyverse]; }; @@ -10881,7 +10913,7 @@ in with self; { nonmem2R = derive2 { name="nonmem2R"; version="0.2.1"; sha256="0a7h9wb8dqjgzyk4hd9ivhy90n80wrrp4zkrxnvgfvza1619qd52"; depends=[ggplot2 gridExtra lattice latticeExtra MASS mvtnorm reshape2 splines2]; }; nonmemica = derive2 { name="nonmemica"; version="0.9.0"; sha256="1vn70qynw2j2sf0z55dr9cl0inqzdk48xybsavcivn5dbl5lzzg2"; depends=[csv dplyr encode lazyeval magrittr metaplot rlang spec tidyr xml2]; }; nonneg_cg = derive2 { name="nonneg.cg"; version="0.1.6"; sha256="15361k0kjy1465s8pr9jb5jy22mibi37zcnza7mbfh5l66hr29kh"; depends=[Rcpp]; }; - nonnest2 = derive2 { name="nonnest2"; version="0.5-2"; sha256="1bq44qqmm59j91m0sny4xnqmxqlga4cm48qdsw8xfs3x19xwmxk6"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; + nonnest2 = derive2 { name="nonnest2"; version="0.5-3"; sha256="1mnv4pa583ir9s03h952hk40lwdywr3g88g76sk1zsa54rcmn82c"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; nonpar = derive2 { name="nonpar"; version="1.0.1"; sha256="0pxks3nga7jrcvq0pzr1axj3a9xvzky836fl7966a09ws1vff7i4"; depends=[]; }; nonparaeff = derive2 { name="nonparaeff"; version="0.5-8"; sha256="1kkn68m7cqlzx3v539cjxw3x5a2y86lvmyv2k98s87m3yvqg0gdk"; depends=[gdata geometry Hmisc lpSolve psych pwt rms]; }; nontarget = derive2 { name="nontarget"; version="1.9"; sha256="0ndqcr73sja5ks5kdahhakpz9lw3rp26imklagdv4f5agqnb608s"; depends=[enviPat mgcv nontargetData]; }; @@ -10892,8 +10924,7 @@ in with self; { nord = derive2 { name="nord"; version="1.0.0"; sha256="1gisqca85vzbqq5hs5bgqjgrjyksxj176x97kv9vv6mwll8kijl9"; depends=[ggplot2]; }; nordklimdata1 = derive2 { name="nordklimdata1"; version="1.2"; sha256="0c2hbh3qy8nrs275lxpzfgqsfgwp81m4kv0layvnjj09fcybm54x"; depends=[]; }; norm = derive2 { name="norm"; version="1.0-9.5"; sha256="01j1h412yfjx5r4dd0w8rhlf55997spgb6zd6pawy19rgw0byp1h"; depends=[]; }; - norm2 = derive2 { name="norm2"; version="2.0.2"; sha256="1bpkxgcz940mn7r62sn1w38kii93sjdxbvfayp0nhl4a2qanwxsm"; depends=[]; }; - normalp = derive2 { name="normalp"; version="0.7.0.1"; sha256="1gvbqirvb0q6c3831qqm5x7nj7rls1v7nfj7mf1nmwg5b0ljakp0"; depends=[]; }; + normalp = derive2 { name="normalp"; version="0.7.2"; sha256="0fqpz6v9v3xjmyh7mh2yvkjdn3v4d0nk93x7s0gj28kazl7137kz"; depends=[]; }; normalr = derive2 { name="normalr"; version="1.0.0"; sha256="1ahrg188vbhnrnwag0zi6lcb3g0y1mbz06sl3j1wyllq5l918cc7"; depends=[magrittr MASS purrr rlang shiny]; }; normtest = derive2 { name="normtest"; version="1.1"; sha256="073r2mwfs6c4vqh8921nlyygl0f20nhv997s0iwf00d3jckkc4pp"; depends=[]; }; normwhn_test = derive2 { name="normwhn.test"; version="1.0"; sha256="1kr45bfydk40hgdg24i2f28cdaw65hg9gmsgv4lsvvr2m3r74vi6"; depends=[]; }; @@ -10902,13 +10933,13 @@ in with self; { nortestARMA = derive2 { name="nortestARMA"; version="1.0.2"; sha256="11ala9z0snsbn1xmj9yzs4kyh9js1w19x0dnnmh5cbr9bi7aag50"; depends=[astsa]; }; nos = derive2 { name="nos"; version="1.1.0"; sha256="0hbncama8cx8q0rc56bil38fbj33z49v4d6zdkvxs6wgmmglnrfs"; depends=[dplyr gmp]; }; nose = derive2 { name="nose"; version="1.0"; sha256="17l78vmfqc22inq6zaqpnk2m91wp0nfjbbwfcpfqykf8lk9ipqna"; depends=[]; }; - nosoi = derive2 { name="nosoi"; version="1.0.0"; sha256="0g4s8324k46m8gfj1mdjiqz2cw4ips7nnzl8xyar89ylqy7gvqiw"; depends=[data_table dplyr magrittr raster reshape2 stringr]; }; + nosoi = derive2 { name="nosoi"; version="1.0.1"; sha256="01gyc42dhp03x5br5wlhdhnmc9dfq4jlf2lakf2ff9ab79d0xvn7"; depends=[data_table dplyr magrittr raster reshape2 stringr]; }; not = derive2 { name="not"; version="1.2"; sha256="1671j3yirzdyhb02khx1yddslyig5jlnb0bdbgdlkb21n4zwaqa4"; depends=[]; }; notifyR = derive2 { name="notifyR"; version="1.02"; sha256="0jx76ic5r1crcgg0n0yqnka0gwniflfxakh838a98j9wb11wi6h5"; depends=[RCurl rjson]; }; notifyme = derive2 { name="notifyme"; version="0.3.0"; sha256="0b6xrv6c4id7rs0dafg96pl4brn4yma5xh9wjz78ql44bg3w5s91"; depends=[dplyr httr magrittr]; }; nowcasting = derive2 { name="nowcasting"; version="1.1.4"; sha256="1nj34cbkv1xlhmcfhxs32shv00mz02rp95xj59qkq5by53sx8qwq"; depends=[corpcor DBI httr lubridate magic matlab Matrix RCurl RMySQL vars xts zoo]; }; noweb = derive2 { name="noweb"; version="1.1-2"; sha256="1h0v92l5jzgiy5rz33pan1l6rb3mykckmvn5c8jm3hhph6ipgqad"; depends=[]; }; - np = derive2 { name="np"; version="0.60-9"; sha256="1z4jcpx8bbgwslv42wrphfd1qfq965qjn0kmfxm5f6hbbycahcgy"; depends=[boot cubature quadprog quantreg]; }; + np = derive2 { name="np"; version="0.60-10"; sha256="06h8k0kdv5s258jr6s08fabvlycrbs7iq34jk2f2hfmqm2y4nyx2"; depends=[boot cubature quadprog quantreg]; }; npExact = derive2 { name="npExact"; version="0.2"; sha256="055wm5lcj98wb71lqp2zdyl8kkwvi6lwmnaylynvr907xqabaqvd"; depends=[]; }; npIntFactRep = derive2 { name="npIntFactRep"; version="1.5"; sha256="14ms66ppzb4jjsa3fparic6gdn913f6wv2ccjyb02j1ahs4iaa4g"; depends=[ez plyr]; }; npROCRegression = derive2 { name="npROCRegression"; version="1.0-5"; sha256="09ngfj0bd9cp19lpwsbknp2y71x36k03ph84bmf67wm1q2na7f93"; depends=[lattice]; }; @@ -10920,7 +10951,7 @@ in with self; { npbr = derive2 { name="npbr"; version="1.6"; sha256="1jvq4snwrwjhhjgm8n8yxd5y94ks5zzi0xwdn931yp300qnikyzc"; depends=[Benchmarking np quadprog Rglpk]; }; npcopTest = derive2 { name="npcopTest"; version="1.03"; sha256="1kpa3avi95aa93y038f4zqhhdp8vdscdk0c6397qmqjg34hf1dnr"; depends=[]; }; npcp = derive2 { name="npcp"; version="0.1-11"; sha256="0zkf01rv065x6sg8b8yal6125wbvjzaris5l9ghn2279q1fwdqz3"; depends=[]; }; - npcure = derive2 { name="npcure"; version="0.1-4"; sha256="0fdl903akry53cbk3cpmsfgzj71vmpz9qksk1dzrg8yzsql37mf6"; depends=[permute zoo]; }; + npcure = derive2 { name="npcure"; version="0.1-5"; sha256="0hf6w8w76qmjdsd6zgg85jj5ypmmg1a1ryzqwnxcypsdjxaq539z"; depends=[permute zoo]; }; nph = derive2 { name="nph"; version="2.0"; sha256="037vh3x3zlgg7jcbbwvcrlhm38d17zgz0m6d54y84mcclzzyc746"; depends=[ggplot2 mvtnorm]; }; nplplot = derive2 { name="nplplot"; version="4.5"; sha256="1dpbs0jb34gv0zj528357z1j2pwahjbp04rm7jir6qk0jhyaxxgh"; depends=[]; }; nplr = derive2 { name="nplr"; version="0.1-7"; sha256="1h3qv9dlw2gx8km3slyvrl588nif1n87df8xwmm6p75ziqhn2f56"; depends=[]; }; @@ -10945,7 +10976,7 @@ in with self; { npsurvSS = derive2 { name="npsurvSS"; version="1.0.1"; sha256="0k9xvxii5527vynf7yy50j7z4jhxgk5ydhdcaaygm9ynx5yq14ip"; depends=[]; }; nptest = derive2 { name="nptest"; version="1.0-0"; sha256="13h93sx5fsbfiy3q88j4bl0p3hwqzi8l4ab0r0qha78dzd6skq2v"; depends=[]; }; nricens = derive2 { name="nricens"; version="1.6"; sha256="0fpgp6k3mhb0qxbx6248k9bscnmlzwj70mqh631a1nc4cpdjvw3q"; depends=[survival]; }; - nsRFA = derive2 { name="nsRFA"; version="0.7-14"; sha256="0sd3br2a5jf6mqbxk8s2i7px9vi9bk3pl8bd5884k40xqcj77irs"; depends=[]; }; + nsRFA = derive2 { name="nsRFA"; version="0.7-15"; sha256="004dm143v032b80knpz7pj3z71lci7vgd6hz1zz22rpfg27ghgdd"; depends=[]; }; nsROC = derive2 { name="nsROC"; version="1.1"; sha256="1fi7k61fja98kpn528jprjdycwz01rnqm368m82anxh21k7q4s1m"; depends=[sde survival]; }; nsapi = derive2 { name="nsapi"; version="0.1.1"; sha256="06xf2p6f911vwpzky47r35fjgjvlhp13p9pf1zlvjrv66kdw8vbp"; depends=[crul xml2]; }; nsarfima = derive2 { name="nsarfima"; version="0.1.0.0"; sha256="0iw1daha6c2l4zmqa0m917kgbx3d7mh7bhwbrsyxmvr5qs81drhk"; depends=[]; }; @@ -10960,7 +10991,7 @@ in with self; { nsprcomp = derive2 { name="nsprcomp"; version="0.5.1-2"; sha256="1zlc1ximx96f235c0l8qfs6vbp1kpnbf943wxsfahnnlnxvwi59f"; depends=[]; }; nsrr = derive2 { name="nsrr"; version="0.1.3"; sha256="11g0xgznd2n29cc9zxr0rrkqhxhjnp277gb7z871kgk6qnjswpwv"; depends=[digest httr jsonlite]; }; nucim = derive2 { name="nucim"; version="1.0.6"; sha256="0bw9a2xz2w5jlr2qlbia6jfm2yp09n3gzg8a630p1ks75xvlmkbx"; depends=[bioimagetools EBImage fields stringr]; }; - nullabor = derive2 { name="nullabor"; version="0.3.5"; sha256="0hnrawf8s2g0xjc9kh2p3pbdnbai7q71z7arab5mnrz6qbiyym34"; depends=[dplyr forecast fpc ggplot2 magrittr MASS moments purrr rlang tibble tidyr tidyverse tsibble]; }; + nullabor = derive2 { name="nullabor"; version="0.3.9"; sha256="19nfmsnzndg9pdjg7m9w4vm4c3209ny52cpjdhmmhggvf7dxaiyg"; depends=[dplyr forecast fpc ggplot2 magrittr MASS moments purrr rlang tibble tidyr tsibble viridis]; }; numDeriv = derive2 { name="numDeriv"; version="2016.8-1.1"; sha256="0idk02pqkziik932bd8k72d1q775g1is3m4bc861pcxfz6gx3i6q"; depends=[]; }; numGen = derive2 { name="numGen"; version="0.1.1"; sha256="1y41wq31r8126dz1sj23smq2k6v9yqczq4ddgzqb73dsrx9dmmc0"; depends=[]; }; numKM = derive2 { name="numKM"; version="0.1.0"; sha256="0pnwb7skp5jx5ibgfkympq59m9sf71gvk5zc0fwik539vrzfykdf"; depends=[survival]; }; @@ -10969,9 +11000,6 @@ in with self; { numbersBR = derive2 { name="numbersBR"; version="0.0.2"; sha256="0ihxlny745gpz1ngq862rydn1zwn8zni1xw9mmgw8hkylsrnjfq8"; depends=[stringr]; }; numform = derive2 { name="numform"; version="0.5.0"; sha256="1c9vhzm4rjh8b5bkzkv1r9j2y1iqndq9ndandix28wdgn2v6lzv6"; depends=[glue]; }; nutriNetwork = derive2 { name="nutriNetwork"; version="0.1.1"; sha256="0ya95h88jkiwc7cg7ic8bmyd7b0lgnhxrywwqvi2j6m6nbvvaxzy"; depends=[glasso huge igraph Matrix tmvtnorm]; }; - nutshell = derive2 { name="nutshell"; version="2.0"; sha256="1v11g5wqyxnj29b7akl0cwa34hcqs79ijbiv735pg3df4ggyrzvm"; depends=[nutshell_audioscrobbler nutshell_bbdb]; }; - nutshell_audioscrobbler = derive2 { name="nutshell.audioscrobbler"; version="1.0"; sha256="10fvc5d22gnfb0bkgbww48f0vvcaja96g5gfv85kap939j11172j"; depends=[]; }; - nutshell_bbdb = derive2 { name="nutshell.bbdb"; version="1.0"; sha256="19c4047rjahyh6wa6kcf82pj09smskskvhka9lnpchj13br8rizw"; depends=[]; }; nvctr = derive2 { name="nvctr"; version="0.1.1"; sha256="0hjrimg0hvwgkx2hbln6k8z0f2bp9kln7mxxh623qjp0hg4mcvcn"; depends=[magrittr pracma]; }; nvmix = derive2 { name="nvmix"; version="0.0-3"; sha256="0dvx21nfp82s7bk5vd9xxp9979w4mq8v1hx1zxa97sv2xr4g2m5y"; depends=[Matrix qrng]; }; nws = derive2 { name="nws"; version="1.7.0.1"; sha256="1fn92n6brjhh8hpvhax7211cphx2cn0rl99kjqksig6z7242c316"; depends=[]; }; @@ -10982,7 +11010,6 @@ in with self; { oaColors = derive2 { name="oaColors"; version="0.0.4"; sha256="040sdqrk9dciylnnrrshlj06s9qhvngii9shx1p8412ip7mk8r1m"; depends=[MASS RColorBrewer]; }; oaPlots = derive2 { name="oaPlots"; version="0.0.25"; sha256="0c5ig1ar02vg38pjjmp3gd53ij1j7pzajs0zrlfajz141qkv2ysr"; depends=[ggplot2 oaColors]; }; oai = derive2 { name="oai"; version="0.3.0"; sha256="1ipw9bq3ra66d1ddj1rylyyd20mlcb2i7phzhywra53s1fdifq1g"; depends=[httr plyr stringr tibble xml2]; }; - oak = derive2 { name="oak"; version="0.2.3"; sha256="1119llsv9pik6fpw3zhiz6xnqc2svsf0dfwcg9iywdjclv4bqqbs"; depends=[foreach purrr R6 rlang rlist rstudioapi]; }; oaqc = derive2 { name="oaqc"; version="1.0"; sha256="1rc0l79xygmr2rp5sjadzigbj65a13z5xlvrxzy26cl0wsxwhmjf"; depends=[]; }; oasis = derive2 { name="oasis"; version="3.0.4"; sha256="1h1w46rbkbsjvh3fjniy3v7y30r2vf1kiqs807kavf0bpb6a1202"; depends=[fslr mmand neurobase oro_nifti]; }; oaxaca = derive2 { name="oaxaca"; version="0.1.4"; sha256="12w5l2a8i2964rxy9km2srlycx35y7ia8p07ra7gsxr4h8156z3c"; depends=[Formula ggplot2 reshape2]; }; @@ -10998,15 +11025,16 @@ in with self; { obsSens = derive2 { name="obsSens"; version="1.3"; sha256="1vfm1mzsycwkqa39vf3fcdv1s6adps9hw1rxlvl8v9kq746hcabw"; depends=[]; }; observer = derive2 { name="observer"; version="0.1.2"; sha256="1027827k57qb4xppx0xxxffd1s3n7pz754irdx3v1v3piix8xi8m"; depends=[bazar bit dplyr lazyeval magrittr tibble]; }; occ = derive2 { name="occ"; version="1.1"; sha256="1aka29qqwbd494kvi15yyyqkb9hks4ky2gcvykxhx2drm2fnsn4g"; depends=[]; }; - oce = derive2 { name="oce"; version="1.1-1"; sha256="0hwfnpb6q6pmckzgh67ryvqd1jkrzzhn187x1655rnmkmp9zis1c"; depends=[gsw Rcpp testthat]; }; + ocd = derive2 { name="ocd"; version="1.0"; sha256="0r14w09wzyxp685jbzqj3dirnhsq106d23igl1jd5xpwbj2192n5"; depends=[]; }; + oce = derive2 { name="oce"; version="1.2-0"; sha256="18ls8c8ia00dn9f9lxk01mvwqmxd1ilx1d7y59d1nixd40mjy1wr"; depends=[gsw Rcpp testthat]; }; oceanis = derive2 { name="oceanis"; version="1.0.6"; sha256="16sww5552xx04np8dxlqlhn1qzhjdmwd1z7b8dp9pskxbr9fhdb4"; depends=[classInt dplyr DT foreign ggplot2 leaflet leaflet_extras lwgeom mapview munsell readODS sf sfc shiny shinyBS shinyjs shinythemes stringr tidyr units xlsx]; }; - oceanmap = derive2 { name="oceanmap"; version="0.1.0.1"; sha256="0cdv5rizrlbzz1ifcqh726kmki0j68w829k9f0cfnckmh3rwj2y6"; depends=[abind extrafont fields lubridate mapdata maps maptools ncdf4 plotrix raster sp]; }; oceanwaves = derive2 { name="oceanwaves"; version="0.1.0"; sha256="0izgnqjji3xrvv8xbpsdbrx53wdb3rg3045xx6gcknfl2fj5iky7"; depends=[bspec ggplot2 signal]; }; - ocedata = derive2 { name="ocedata"; version="0.1.5"; sha256="0rs3nzacvg5mbbmbhcj8g9ikjlw26x2mka7lp644l17kgmzzynh6"; depends=[testthat]; }; + ocedata = derive2 { name="ocedata"; version="0.1.6"; sha256="0rf02bx7bb00ipp23jbpj2xdmj15xzi54qw3hms3ccghmaj40a28"; depends=[testthat]; }; ockc = derive2 { name="ockc"; version="1.0"; sha256="0chzrs3ipa2518r4d35z4fxffgq12p1mwj0hzkxw19gdgq6aa8s7"; depends=[flexclust modeltools]; }; oclust = derive2 { name="oclust"; version="0.1.0"; sha256="005ml6vhi9rw6js2v4f1dc2ci8kcd7iwrkgbs4c1qxc836ygq0yx"; depends=[entropy mclust]; }; ocomposition = derive2 { name="ocomposition"; version="1.1"; sha256="0fk8ia95yjlvyvmjw7qg72piqa40kcqq9wlb3flc6a81pys1ycb5"; depends=[bayesm coda]; }; ocp = derive2 { name="ocp"; version="0.1.1"; sha256="0q52s8j3z3xwnma3sxx6019qxid66bf0a43w4g8xjagplwps57dx"; depends=[]; }; + ocs4R = derive2 { name="ocs4R"; version="0.1"; sha256="1sm2fl503ky4pxv9873zykidb56f7dygq1xckjsh0d7m78n4gzx5"; depends=[curl httr jsonlite openssl R6 XML]; }; odbc = derive2 { name="odbc"; version="1.2.2"; sha256="1p30n1f6yfx80rk29l94asdi0chk4c7h6pp09aq9bbsq9g8109dq"; depends=[BH bit64 blob DBI hms Rcpp rlang]; }; odds_converter = derive2 { name="odds.converter"; version="1.4.8"; sha256="09s8pg55gpsxmrbimzg5rsr1n07la93781sar6vab5p9zn9zxgx4"; depends=[]; }; odds_n_ends = derive2 { name="odds.n.ends"; version="0.1.1"; sha256="0kgdv4m14h4a16b0k2s2qjyjn0kxk5sf4qkbi6ikm6kqdh5ashp4"; depends=[MASS]; }; @@ -11015,11 +11043,10 @@ in with self; { odeintr = derive2 { name="odeintr"; version="1.7.1"; sha256="0wfb5lgv10p0qyfbn9hdg14bda37v43lpgbwv6nbw63zzbsbazqi"; depends=[BH Rcpp]; }; odin = derive2 { name="odin"; version="1.0.1"; sha256="1m1rqlh9z6hpna6qhyxhavqph3j66hbd2b5md5ha2hrbjq93yynm"; depends=[cinterpolate crayon deSolve digest jsonlite R6 ring]; }; odk = derive2 { name="odk"; version="1.5"; sha256="0fcnr4c1clwx1sk6fgg4cx506gdi90n2h05g0i47p4s5bra0qwwl"; depends=[gsheet openxlsx]; }; - odpc = derive2 { name="odpc"; version="2.0.1"; sha256="06d574sj7p5qlf7s3lbrwd56mcs4lq3pn9bkzwxhpybibgrfzn5q"; depends=[doParallel foreach forecast Rcpp RcppArmadillo]; }; - odr = derive2 { name="odr"; version="1.0.0"; sha256="0niadinljx5pph329dgixivdc9s1l27ik9755fbfhmplhj92ihi2"; depends=[]; }; + odpc = derive2 { name="odpc"; version="2.0.2"; sha256="0wmra56w9k1bp27lhv6ssz400ggzmggl7l32vxkhynnxr0aphx7c"; depends=[doParallel foreach forecast Rcpp RcppArmadillo]; }; + odr = derive2 { name="odr"; version="1.0.2"; sha256="0dj5piyd6h92q6agv8yvzky3qpxjn6zpgvf502hf0n6k9gx6kdpl"; depends=[]; }; ofGEM = derive2 { name="ofGEM"; version="1.0"; sha256="0xdkl8k12an9pdy6i5nay4m2iakrwsp0lr3zl8gphii75j0ywz7k"; depends=[CompQuadForm forestplot MASS]; }; - officer = derive2 { name="officer"; version="0.3.6"; sha256="1i6jmnbkx7gd0qyf6akhizmxp7y1dh3h7a886mcbmrzka9d60zh4"; depends=[base64enc digest htmltools magrittr R6 Rcpp rlang uuid xml2 zip]; }; - offlineChange = derive2 { name="offlineChange"; version="0.0.2"; sha256="1d8jm8mm8g1fcbffk697qap58dcw3yyvrm9daviy42jsz59nbsxs"; depends=[Rcpp]; }; + officer = derive2 { name="officer"; version="0.3.8"; sha256="0xhx5n6qksyh2s9hvwhnc8y0hn362asc5y94ld06snad786hz0rw"; depends=[magrittr R6 uuid xml2 zip]; }; oglmx = derive2 { name="oglmx"; version="3.0.0.0"; sha256="13axmhbqhv4kkcdsdmp9r7p0d0kyqlsaqgyyllbkxlxb4hfz79b6"; depends=[maxLik]; }; ohenery = derive2 { name="ohenery"; version="0.1.1"; sha256="0i7cc110c30y7dm86srh2xkikkmlr28mvy0kkjxywxmiwnrsmzjq"; depends=[dplyr magrittr maxLik Rcpp]; }; ohtadstats = derive2 { name="ohtadstats"; version="2.1.1"; sha256="0hkjs322vii1dsminlkwpwi12sc9pd88jag7p4dmy6nfw2hh2d69"; depends=[lattice]; }; @@ -11027,18 +11054,21 @@ in with self; { okcupiddata = derive2 { name="okcupiddata"; version="0.1.0"; sha256="1l04rr4yr73a6q2am9ylyr5prf347hkf2jx735w78rsb6472kbaq"; depends=[]; }; okmesonet = derive2 { name="okmesonet"; version="0.1.5"; sha256="1kzyzmg702ayzphn9jsk64m51mlnz37ylxiwq5gsr23vaiida680"; depends=[plyr]; }; olctools = derive2 { name="olctools"; version="0.3.0"; sha256="1gbchwynvmryarz32f24v56kj57h7x6nrrm878fkjkpq140cqwzz"; depends=[Rcpp]; }; + ollggamma = derive2 { name="ollggamma"; version="1.0.2"; sha256="1990hr9gww636xr4gkvc816hd0pc78nw3ypbzflkh5g3pmsn7bc2"; depends=[]; }; olr = derive2 { name="olr"; version="1.1"; sha256="1l6m2gbglh8idy4k2q23qgfb7in1a6pnwiji1gbygfan6paw4xza"; depends=[plyr]; }; - olsrr = derive2 { name="olsrr"; version="0.5.2"; sha256="13qampcc07qfjj4r3ira0m1j2wgnrkf5p1wswr9g814azhm52haz"; depends=[car checkmate cli clisymbols crayon dplyr ggplot2 gh glue goftest gridExtra magrittr nortest purrr Rcpp recipes rlang shiny stringr tibble tidyr]; }; + olsrr = derive2 { name="olsrr"; version="0.5.3"; sha256="0rh1jb0z0ypspzcp4vbpzjz960yj76myk2j4zb1vi9gnnj3clw8y"; depends=[car data_table ggplot2 goftest gridExtra nortest Rcpp]; }; omd = derive2 { name="omd"; version="1.0"; sha256="0s1wcgivqapbkzjammga8m12gqgw113729kzfzgn02nsfzmsxspv"; depends=[]; }; omics = derive2 { name="omics"; version="0.1-5"; sha256="1y2x33mfgq98nglhvpr1wq1v6nfiq4njy2yac47x72rpwxsj9vb1"; depends=[lme4 pheatmap]; }; + omicwas = derive2 { name="omicwas"; version="0.3.1"; sha256="14vx9mhy51ma05m85plsnx53rhq1rd4nw9709sf8ibc55gdrfg5l"; depends=[broom data_table dplyr ff glmnet magrittr MASS matrixStats PCDimension R_utils ridge rlang sva tidyr]; }; ompr = derive2 { name="ompr"; version="0.8.0"; sha256="1nmd5wa1g2xzmwqfqf882bxcrmkxbb5b414cbbzvmqzfs34yk6bl"; depends=[data_table lazyeval Matrix progress Rcpp rlang]; }; ompr_roi = derive2 { name="ompr.roi"; version="0.8.0"; sha256="1cbrchvpd31lxpxvw2l3q9k5jmffarb1shca8kwm76y5a6zxxq63"; depends=[Matrix ompr ROI slam]; }; omu = derive2 { name="omu"; version="1.0.2"; sha256="03mj5xk447gadsnvqrm97cjcyfq4xzkgc46kw85gishv7w9qmqrk"; depends=[dplyr ggfortify ggplot2 KEGGREST magrittr plyr reshape2 stringr tidyr]; }; oncomodel = derive2 { name="oncomodel"; version="1.0"; sha256="1jyyq9znffiv7rg26mjldbwc5yi2f4f8npsd2ykhxyacb3g96fp1"; depends=[ade4]; }; - oncrawlR = derive2 { name="oncrawlR"; version="0.1.8"; sha256="0l7b3gx21jli97jq0i87bkp01v1b4xmmh9k4zjhdij6412rv0rfh"; depends=[caret DALEX dplyr e1071 formattable fs ggplot2 htmltools jsonlite pdp pROC RCurl readr rlang rlist scales sparkline tidyr webshot xgboost]; }; + oncrawlR = derive2 { name="oncrawlR"; version="0.2.0"; sha256="0cm26diaf3jlzfrpgh13q0hakakmj6vy41wk9z0w81az4jcg9sn9"; depends=[caret DALEX dplyr e1071 formattable fs ggplot2 htmltools jsonlite pdp pROC RCurl readr rjson rlang rlist scales sparkline tidyr webshot xgboost]; }; onehot = derive2 { name="onehot"; version="0.1.1"; sha256="1cdsz007wr054k5phvihhg4qx0fc039k2s6484m92kws8mb2ziix"; depends=[]; }; onelogin = derive2 { name="onelogin"; version="0.2.0"; sha256="06p3a8kaxmvsj8nn7dy8w6wv1jjw67is991hqg9q0fa20ifym3dl"; depends=[glue jsonlite magrittr R6 safer tibble]; }; - onemap = derive2 { name="onemap"; version="2.1.2"; sha256="142yasn8pyd046d8s0k3i4ynmpq7rh6v2vjdnj88yn99zshaxfig"; depends=[ggplot2 MDSMap plotly Rcpp reshape2]; }; + onemap = derive2 { name="onemap"; version="2.1.3"; sha256="0fwkr845zz0j8ccrwpksb28lly1rsgj3603ak1aqqgmlx6481p08"; depends=[ggplot2 MDSMap plotly Rcpp reshape2]; }; + onemapsgapi = derive2 { name="onemapsgapi"; version="1.0.0"; sha256="11w3xkjxhjf0b78hfjxjk650giswaf1js471backz4pcb97gaigl"; depends=[dplyr furrr future httr purrr rlang stringr tidyr]; }; onewaytests = derive2 { name="onewaytests"; version="2.4"; sha256="1rsamf6mwpah02zwpv270sn17aaav0c030wlsv90k2awmkms2ka6"; depends=[car ggplot2 moments nortest]; }; onion = derive2 { name="onion"; version="1.2-7"; sha256="17jx7saxcsahyyivln4v9fzzcmidy6ygjd9n81skv5jpr491zkgk"; depends=[]; }; onlinePCA = derive2 { name="onlinePCA"; version="1.3.1"; sha256="08qivsfnwz5vp089lv9czsaz3nfi42kn9yhgzf27dji18y2xscic"; depends=[Rcpp RcppArmadillo RSpectra]; }; @@ -11053,28 +11083,29 @@ in with self; { opalr = derive2 { name="opalr"; version="1.3.0"; sha256="029sxy31in377p7s25y601vmdhcxxs6cn36xvqhkxcx15j96mprp"; depends=[httr jsonlite mime progress xml2]; }; opart = derive2 { name="opart"; version="2019.1.0"; sha256="0yw4vlip4whhvp23yjr57h5j0ii8ighp77g3fjjzr3l56slmrmcz"; depends=[]; }; openCR = derive2 { name="openCR"; version="1.4.1"; sha256="046ijw5ss8nb0m11p7r682zi7242m0ljydnsrr3gwrnmc4ayk6xv"; depends=[abind MASS nlme plyr Rcpp RcppParallel secr stringr]; }; - openEBGM = derive2 { name="openEBGM"; version="0.8.2"; sha256="0v6jr1yry937knvkrn448rkilwfl7w90169lm5vnp53ds6fhh7bj"; depends=[data_table ggplot2]; }; + openEBGM = derive2 { name="openEBGM"; version="0.8.3"; sha256="120lp7fy6abj6f8g6naq4018d0dfzz6bq3dlh0xdhd4iclb7pplv"; depends=[data_table ggplot2]; }; openNLP = derive2 { name="openNLP"; version="0.2-7"; sha256="15yl74wv6w1d2wwpn1xlkkpam3c62977gnqal651fv623v29gg35"; depends=[NLP openNLPdata rJava]; }; openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-4"; sha256="0j45rh9qki8r5wavaysrfsvb3wc3x8jjicqff2yi0r34j58xvlv8"; depends=[rJava]; }; openSTARS = derive2 { name="openSTARS"; version="1.1.0"; sha256="1cjws49r22cmdax136zcy3k35yzbajkm6pyfibgcw2iqdxy1vcxg"; depends=[data_table progress raster rgdal rgrass7 sf sp SSN]; }; - openVA = derive2 { name="openVA"; version="1.0.8"; sha256="17nqh43gmhlb383ack1pbjkdfdb2g0k527zprdp1xkyxbp92v7xa"; depends=[cli crayon ggplot2 InSilicoVA InterVA4 InterVA5 Tariff]; }; + openVA = derive2 { name="openVA"; version="1.0.9"; sha256="0pzcnyq45mb7041jx0krws65sxq4wldx01aafnsxqp1p5ly13y3p"; depends=[cli crayon ggplot2 InSilicoVA InterVA4 InterVA5 Tariff]; }; openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; }; openair = derive2 { name="openair"; version="2.7-0"; sha256="1h2hyk93xvcw3i86k1kw7w9y2s39l6xnj7hjqp3wawgm4nnsr5kp"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr Rcpp readr rlang tidyr]; }; - openblender = derive2 { name="openblender"; version="0.3.4"; sha256="0lf6gm1kzslqkrps2wasavfqwaz80q67jjrzf38m1dls0nwzvh1x"; depends=[httr jsonlite xml2]; }; + openblender = derive2 { name="openblender"; version="0.4.6"; sha256="1dyr6ckcbsb10cdblp435q7scgqyw90jvzx76bzabi1k8m0sjlxc"; depends=[httr jsonlite]; }; opencage = derive2 { name="opencage"; version="0.1.4"; sha256="1lqs38lml73axsjlsjkmcsb2irgs40mjrx2cn3k0bjb63qyb9hf5"; depends=[dplyr httr jsonlite memoise]; }; opencastR = derive2 { name="opencastR"; version="0.1.2"; sha256="0fnp4bsr35knff7q19jqmlwdnfh9qzk2zsvg92y3pg1g64fmxazv"; depends=[httr jsonlite]; }; - opencpu = derive2 { name="opencpu"; version="2.1.5"; sha256="1s2jzssiqcf4n6zqb1hj78zpm6rh13r6vbk0drydc6iwqdhg302h"; depends=[brew curl evaluate httpuv jsonlite knitr mime openssl protolite rappdirs remotes sys webutils zip]; }; + opencpu = derive2 { name="opencpu"; version="2.1.6"; sha256="0wv357288j3wl8mgm8yr7yzm2z0hzdg7k1056smhxjlrb42bww95"; depends=[brew curl evaluate httpuv jsonlite knitr mime openssl protolite rappdirs remotes sys webutils zip]; }; opencv = derive2 { name="opencv"; version="0.1"; sha256="0m649g6k6cgxnljjx8czypjawbyzx7xjcg32wddxkrgi2b236lwh"; depends=[magrittr Rcpp]; }; - opendatatoronto = derive2 { name="opendatatoronto"; version="0.1.1"; sha256="1rabbpq1jmihrm5wz8i5pkxfhpbm8x6dk3bqj56fnkzqkmg6zwjj"; depends=[ckanr geojsonsf magrittr readxl sf tibble xml2]; }; + opendatatoronto = derive2 { name="opendatatoronto"; version="0.1.2"; sha256="1440i9ps2cf78g1z7hfk306c4ym7w4q2yl7h696lih1kilzmdw0k"; depends=[ckanr magrittr readxl sf tibble xml2]; }; opendotaR = derive2 { name="opendotaR"; version="0.1.4"; sha256="17cygsw3nkg6zincfrcdh1509rlz3n5zrv9wvv7mjngm61sn79nf"; depends=[dplyr jsonlite lubridate]; }; openintro = derive2 { name="openintro"; version="1.7.1"; sha256="059azlasdkmp8f54qpjf3mq5dyqakw0dgx0kx85wfdmhq38zal5n"; depends=[]; }; openssl = derive2 { name="openssl"; version="1.4.1"; sha256="1ihz2qi33lhngl19xdanq0pbmfaacy63794mg8ll7z2lab3yryzp"; depends=[askpass]; }; opentraj = derive2 { name="opentraj"; version="1.0"; sha256="13nqal96199l8vkgmkvl542ksnappkscb6rbdmdapxyi977qrgxk"; depends=[doParallel foreach maptools openair plyr raster reshape rgdal sp]; }; - opentripplanner = derive2 { name="opentripplanner"; version="0.2.0.4"; sha256="15r6n3bkmiwir30v82ajzl2drhw2x2shjnwjs3ddqkczak2v4q8c"; depends=[checkmate dplyr geodist googlePolylines httr jsonlite pbapply sf]; }; + opentripplanner = derive2 { name="opentripplanner"; version="0.2.0.8"; sha256="0irk885r8s6xq0krnmb1ylz29z3dg9ypj7k7pf0lcxd5l74kh4jm"; depends=[checkmate dplyr geodist googlePolylines httr jsonlite pbapply sf]; }; openxlsx = derive2 { name="openxlsx"; version="4.1.4"; sha256="1mwxldw9i9nfksx1i6h1kfs7vmsz9fgyllbsipar4vnfyqhqp8q7"; depends=[Rcpp stringi zip]; }; + opera = derive2 { name="opera"; version="1.1"; sha256="1nvm7a1g0pzzlpyk7g5plys1byl4xq2wz59hqys5gxiq0y5sgqwm"; depends=[]; }; operator_tools = derive2 { name="operator.tools"; version="1.6.3"; sha256="1v4dg7xhz24dnp0zxn815x1405ig64ibii6y40la1gvmzcc41dz5"; depends=[]; }; operators = derive2 { name="operators"; version="0.1-8"; sha256="0zgcv2q46qyqv4dhbd33s4044zjw38w8dqfpzs0c1lxjpkil3dnx"; depends=[]; }; - oppr = derive2 { name="oppr"; version="0.0.4"; sha256="1wxdrcchg8izdr4zdvq8dpgz5n2m4b5w4lavmvd3vhvjs6i6bb60"; depends=[ape assertthat cli ggplot2 lpSolveAPI magrittr Matrix proto Rcpp RcppArmadillo RcppProgress tibble tidytree uuid viridisLite]; }; + oppr = derive2 { name="oppr"; version="1.0.1"; sha256="17jmwag893ccl9x9xixig91yamb8xl8g8ahbdrhcnrr8jnxnswi2"; depends=[ape assertthat cli ggplot2 lpSolveAPI magrittr Matrix proto Rcpp RcppArmadillo RcppProgress tibble tidytree uuid viridisLite]; }; ops = derive2 { name="ops"; version="1.0"; sha256="0cvwyn5sz5lx8sin8w4k8ymslfl4nfaa012a9vcl2hvp4850rk25"; depends=[]; }; optAUC = derive2 { name="optAUC"; version="1.0"; sha256="0j1llzqa3n7kqw3i5bb7284z0hi6s5jbjfl9zap0l7xf6hg4x1dn"; depends=[MASS]; }; optBiomarker = derive2 { name="optBiomarker"; version="1.0-27"; sha256="1kkj602d4klwyd8kylawgfysg8dlp2g6j7afkppzv5x8mbhs5ji4"; depends=[e1071 ipred MASS Matrix msm randomForest rgl rpanel]; }; @@ -11085,35 +11116,34 @@ in with self; { optbdmaeAT = derive2 { name="optbdmaeAT"; version="1.0.1"; sha256="1y1mvcyjihpj1wgjmifhmd10717wr1srp7h87azs4gfypgsiqchn"; depends=[igraph MASS Matrix]; }; optextras = derive2 { name="optextras"; version="2019-12.4"; sha256="1sqkid6h13h8i8wzri26s828ycwlxlwpwxd85r8bw9h8hs1n602r"; depends=[numDeriv]; }; optiRum = derive2 { name="optiRum"; version="0.40.1"; sha256="1kl9mzh53pwhrxbn89dsjjpfji7k8vmysscd1qd9sw7vqdan8g6x"; depends=[AUC data_table ggplot2 knitr plyr scales stringr XML]; }; - optiSel = derive2 { name="optiSel"; version="2.0.2"; sha256="0k3651h7ih59w13jzkbh8m5pddi1g1zci5rn9dm3b873yjr2nalx"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline purrr quadprog Rcpp RcppArmadillo reshape2 stringr]; }; - optiSolve = derive2 { name="optiSolve"; version="0.1"; sha256="1wnpj7z0vqf91gzgz6r2ympnljq4mczxnnyk3sq7gvf6df4ic2m1"; depends=[alabama cccp MASS Matrix nloptr plyr Rcpp Rcsdp shapes stringr]; }; + optiSel = derive2 { name="optiSel"; version="2.0.3"; sha256="0wkvpwvcckhsjnk17pgdrbsl0qihdpibjbmw2x5izc0vj2zw7fzf"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline purrr quadprog Rcpp RcppArmadillo reshape2 stringr]; }; + optiSolve = derive2 { name="optiSolve"; version="0.1.2"; sha256="0jlxn2rkq6dj59p84f0xdkdgl1yzfbf3ldxryb612j9ivcfkcrvp"; depends=[alabama cccp MASS Matrix nloptr plyr Rcpp shapes stringr]; }; opticskxi = derive2 { name="opticskxi"; version="0.1"; sha256="1vdz5sgjgyh2nj034w87d2yxcbbg97f1b0vijlwzwjkrfz5knfhl"; depends=[ggplot2 magrittr]; }; opticut = derive2 { name="opticut"; version="0.1-2"; sha256="1j479wa7mlp62c2y7shha1w7ybhfy8wvjfaz27kmwd1f61ma1g0l"; depends=[betareg MASS mefa4 pbapply pscl ResourceSelection]; }; optifunset = derive2 { name="optifunset"; version="1.0"; sha256="18pvdl04ln1i0w30ljdb3k86j27zg2nvrn3ws54c1g6zg9haqhbg"; depends=[]; }; optigrab = derive2 { name="optigrab"; version="0.9.2.1"; sha256="1c3q4kx8rkgpjsy0hy2w2dd9kv51avnw1ab82hzmjgngfnvaig0n"; depends=[magrittr stringi]; }; optim_functions = derive2 { name="optim.functions"; version="0.1"; sha256="1la3v8yd9cdichp3mka4x86hr9lynh6qfg7h9ab6cwijw6kzkn6g"; depends=[lhs randtoolbox stringr]; }; optimCheck = derive2 { name="optimCheck"; version="1.0"; sha256="1qjkv1mfyn7sw0dkxxcdaqj85vl71cgffpf3k3mvzy0s8yhxjb4n"; depends=[]; }; - optimParallel = derive2 { name="optimParallel"; version="0.8-1"; sha256="176m425pp3jf48jip513hvbrvgjv78qzylmksqw5ks8yhylq41l9"; depends=[]; }; + optimParallel = derive2 { name="optimParallel"; version="1.0"; sha256="1m7rny7c1x1kaa4swqndhmb83ilihp3ksyfpys9mqlzchja96229"; depends=[]; }; optimStrat = derive2 { name="optimStrat"; version="2.0"; sha256="0n9igrxyasl2h2xjsx044ma3nqbd8258psc2h6za2pw6jjwwlz4g"; depends=[cubature mvtnorm shiny]; }; optimalThreshold = derive2 { name="optimalThreshold"; version="1.0"; sha256="1m39q36p7i7z31b90awriq5jf9rfybyw5lj3m1w33v2ssipkzp1n"; depends=[ars coda HDInterval mgcv rjags]; }; optimbase = derive2 { name="optimbase"; version="1.0-9"; sha256="0ivz24kf3yacgq5bl3s3az1pcyhsz0cza5f8vdksy5gchwqplm8n"; depends=[Matrix]; }; optimization = derive2 { name="optimization"; version="1.0-7"; sha256="09s62ax3w8zijfp2cmh2lvdqbl3nijbjkwq4n3icasi53lzg2179"; depends=[colorspace Rcpp]; }; - optimos_prime = derive2 { name="optimos.prime"; version="0.1.1"; sha256="0r7xjx86m4bklqss7h4cfsw69q74z4z6y40vfrbd6j3qz9ay66xg"; depends=[ggplot2 plotly tidyverse]; }; + optimos_prime = derive2 { name="optimos.prime"; version="0.1.2"; sha256="1a76gfzpd2s4gq15cd3frndak7wc6q3xqh9sllkk665031fx6z1h"; depends=[ggplot2 plotly tidyverse]; }; optimr = derive2 { name="optimr"; version="2019-12.16"; sha256="003wz9r3xdi47ad22l4dkhp0dalknb2s9fp82yamjx7x1xbfvcbk"; depends=[numDeriv optextras Rcgmin Rvmmin setRNG]; }; optimsimplex = derive2 { name="optimsimplex"; version="1.0-7"; sha256="1if32133556zwmijlz6085fg1h65442hy03lzia0ahap3yndqfqy"; depends=[optimbase]; }; optimus = derive2 { name="optimus"; version="0.2.0"; sha256="01njyjfrm6kjwx2qq41c0hsgxzydnrmr3538cpbfdn5i0z5blgyx"; depends=[mvabund ordinal]; }; - optimx = derive2 { name="optimx"; version="2018-7.10"; sha256="0npzgb5ky3p2iky4917grmysawh7mb5gwz4i7ssmh73ypqnndfhk"; depends=[numDeriv]; }; + optimx = derive2 { name="optimx"; version="2020-2.2"; sha256="1dr281q21563ysh60sqca7in1pvzx776qn9v7wv1sp8hk7w99x21"; depends=[numDeriv]; }; optional = derive2 { name="optional"; version="2.0"; sha256="0hj0gwvk9svllv44kfdgv3a2mriwqnaxvn3rj7w1djha7mryl6jl"; depends=[magrittr]; }; optionstrat = derive2 { name="optionstrat"; version="1.4.1"; sha256="0vidaf888zdls5yxy7637fqg6r39l3rxw9bhn16s4xmag7kawljv"; depends=[]; }; - optiscale = derive2 { name="optiscale"; version="1.1"; sha256="1c263w9df66m7lgvzpdfm2zwx9nj8wcdpgh5gijachr2dzffmrp2"; depends=[lattice]; }; - optismixture = derive2 { name="optismixture"; version="0.1"; sha256="0nacfbqlnzajp1hfhf0yzm2d86fxpp4kw2zy33q8k2d4sr56bird"; depends=[Matrix mvtnorm]; }; + optiscale = derive2 { name="optiscale"; version="1.2"; sha256="185yv0xizrrjik0ydyknms28p8ql9x54bhnq3wpyrbiinjm51fms"; depends=[lattice]; }; optmatch = derive2 { name="optmatch"; version="0.9-13"; sha256="1n6h6j0rk750jqxwxkbzdid1ig5xp8xpjw356xrqg02wm7x2gwzq"; depends=[digest Rcpp RItools survival]; }; optparse = derive2 { name="optparse"; version="1.6.4"; sha256="0wyrc42ja3ab5szx46zmz8lm7vzfqxkjca0m0sms8g9hqbmmay6d"; depends=[getopt]; }; optpart = derive2 { name="optpart"; version="3.0-3"; sha256="18h659gbgzflq81lcchc058xjgljkmhpsjkh51ylygwrv1qjrz2i"; depends=[cluster labdsv MASS plotrix]; }; optrcdmaeAT = derive2 { name="optrcdmaeAT"; version="1.0.0"; sha256="16g4612mwyfsckn6l71fbrjnnjv4yvnac1cccbrn3k8jh07qgb1h"; depends=[igraph MASS Matrix]; }; optrees = derive2 { name="optrees"; version="1.0"; sha256="1zqpjii8dsfs98n58qpif81ckvyxkr0661svhlbgzi19xb2vszqs"; depends=[igraph]; }; optweight = derive2 { name="optweight"; version="0.2.5"; sha256="1mfk9sp47flqq7i762wip5191j8m0q9kbyxs4a7f0pd76qwf67q2"; depends=[ggplot2 Matrix osqp]; }; - opusminer = derive2 { name="opusminer"; version="0.1-0"; sha256="1m4gsjylz58pbmhgcy4l9hqdsgy8ra1zg0d3rb6h2qiwfyfm0yh4"; depends=[arules Matrix Rcpp]; }; + opusminer = derive2 { name="opusminer"; version="0.1-1"; sha256="1vw6pbk1iiaxmfws95wmwf56p3afk10s5c3x9f0lliamckpyzkck"; depends=[arules Matrix Rcpp]; }; orQA = derive2 { name="orQA"; version="0.2.1"; sha256="0vivjrpcbql42y078gi91kfpfdpv73j23jkiv8fpazzwzdi8ydqq"; depends=[genefilter gtools nlme Rcpp]; }; ora = derive2 { name="ora"; version="2.0-1"; sha256="0albxqma220rnrpfdq3z9cawr83q1a0zzczbbcy4nijjm4mswphy"; depends=[DBI ROracle]; }; orca = derive2 { name="orca"; version="1.1-1"; sha256="1wd5nh2vh6j1rp78hbw17qipi67f0wimrbkiarak8f7k5pfiy1zn"; depends=[]; }; @@ -11125,7 +11155,6 @@ in with self; { ordcrm = derive2 { name="ordcrm"; version="1.0.0"; sha256="1hy24s23l099b21w5j3p2f0748s8xmhxhslfp65fg7ycwda5qsyw"; depends=[rms]; }; orddom = derive2 { name="orddom"; version="3.1"; sha256="165axs15fvwhrp89xd87l81q3h2qjll1vrwcsap645cwvb85nwsh"; depends=[psych]; }; orderbook = derive2 { name="orderbook"; version="1.03"; sha256="0dlvjrzdhhh8js4g1lvxs46q7fdxfxavxnb4nj6xlwca75i51675"; depends=[hash lattice]; }; - orderedLasso = derive2 { name="orderedLasso"; version="1.7.1"; sha256="1qywvvdbxjqq886i1gd1hsxx92zm7lbalm0acylabap5m2nf9q53"; depends=[ggplot2 Iso Matrix quadprog reshape2]; }; ordering = derive2 { name="ordering"; version="0.7.0"; sha256="0sgwgcjg6sazmi11c9qvxfrzg671kcp18i2q20xbmbj4v3yqhwbh"; depends=[]; }; orderly = derive2 { name="orderly"; version="1.0.4"; sha256="0z83aha45nhi7mym1mygp60jim8znyknmc254gd2cvmg7cmifzb7"; depends=[DBI digest docopt fs ids R6 RSQLite withr yaml zip]; }; orders = derive2 { name="orders"; version="0.1.3"; sha256="14p0wk7y9hbhxwifr4fjp3h9dll0sin8q88an6a536d4f2045j7c"; depends=[Newdistns]; }; @@ -11141,18 +11170,18 @@ in with self; { ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.6"; sha256="0axpndyyns649mwifq8f16l8n8x9nic8cv8l71ljyr2gwlm0nqz0"; depends=[survival]; }; ore = derive2 { name="ore"; version="1.6.3"; sha256="1vh6w3arrhgkfjjjw7ci91xmz4wpfr3cmwd5zkqch89dgn07skkv"; depends=[]; }; ores = derive2 { name="ores"; version="0.3.1"; sha256="12war455cfcn2llig7pkx05b70dp5y7warjq03ayqq6i7c945mhb"; depends=[httr]; }; - orf = derive2 { name="orf"; version="0.1.2"; sha256="123lx1wa3sbi5l5zy92rq30f0hqq1pjpjyaklq9n1k9z28aa7p14"; depends=[ggplot2 ranger Rcpp xtable]; }; + orf = derive2 { name="orf"; version="0.1.3"; sha256="19drrxvnh9y33p0g8pv9bhl6i8jpsdc7nkcpbpxbrsc5hs96dycp"; depends=[ggplot2 ranger Rcpp xtable]; }; org = derive2 { name="org"; version="2019.4.2"; sha256="0jrnr22slgzwsdb4a1jb1l878smhvfb680cgmgb3a88jqj4jfscl"; depends=[]; }; orgR = derive2 { name="orgR"; version="0.9.0"; sha256="1q4qbwnbhmja8rqiph7g7m4wxhzhk9mh91x1jgbnky8bs4ljdgrx"; depends=[data_table ggplot2 ggthemes lubridate stringr]; }; orgutils = derive2 { name="orgutils"; version="0.4-1"; sha256="1yc3avhq3786his7nd60zfbzd9inkfrfz938r8378z59zbb1mzqq"; depends=[textutils]; }; orientlib = derive2 { name="orientlib"; version="0.10.3"; sha256="1qi46hkz73b8722zc3w6wvsq1ydlk37yxn9rd1dqygqbs1svkmvv"; depends=[]; }; origami = derive2 { name="origami"; version="1.0.3"; sha256="034h9dnllzllqd0pzx2if69x17gaxfjrfi4ini6gh23asr3krls3"; depends=[abind assertthat data_table future future_apply listenv]; }; originr = derive2 { name="originr"; version="0.3.0"; sha256="1r4w8gilr25gdqm3slviwas3s7qkpiyv4ifzp7qkby6vrdswnngb"; depends=[crul data_table jsonlite taxize xml2]; }; - orloca = derive2 { name="orloca"; version="4.8"; sha256="01fq3sas2xlp56f6s8jn5079pchszg2pbvzy8d5psxpb5jz59mwc"; depends=[knitr png rmarkdown ucminf]; }; - orloca_es = derive2 { name="orloca.es"; version="4.6"; sha256="1yfsvihm8p4ggdfam50i2xg7dy7khww5qqk6g4lry3m1icwx6vsy"; depends=[orloca]; }; + orloca = derive2 { name="orloca"; version="4.9"; sha256="02fqak8s68q522kgvrqqz9rfhpzby0ln032cisjwgk7nlcx4wbjk"; depends=[knitr png rmarkdown ucminf]; }; + orloca_es = derive2 { name="orloca.es"; version="4.9"; sha256="00zb08dqcsh1ljl4f2djm1pwbrfbaddgapn3v8nascmwxlhb2hkw"; depends=[orloca]; }; ormPlot = derive2 { name="ormPlot"; version="0.3.2"; sha256="0sdn7vrc35pl763snfrrcn0fa6i3agr57sjayjz93friijddkcp6"; depends=[ggplot2 gtable rms]; }; oro_dicom = derive2 { name="oro.dicom"; version="0.5.3"; sha256="1ar70xk2bqk7jgckfivgp4np3dxaynmgdg41n8x0sg9cpxl2lc38"; depends=[oro_nifti]; }; - oro_nifti = derive2 { name="oro.nifti"; version="0.9.1"; sha256="19w9dzyfmfgxgxb5i0l06b6gzqksx879iwicfs76fwmb1q2ph540"; depends=[abind bitops RNifti]; }; + oro_nifti = derive2 { name="oro.nifti"; version="0.10.1"; sha256="02hyc2b9azdlsbl6zb4xd4hc523hi091jimxlv1sp0044ynqzczv"; depends=[abind bitops RNifti]; }; oro_pet = derive2 { name="oro.pet"; version="0.2.6"; sha256="1dczii7knh9241ksswxk9zg1d69mhk2ilrk4kjv7cj9nfm8fgmja"; depends=[minpack_lm msm oro_dicom oro_nifti]; }; orsifronts = derive2 { name="orsifronts"; version="0.1.1"; sha256="1js4q2s1mn263x8szl5q47ajfxv9lsjd5zyphwyhbkqrnd8ijd3w"; depends=[sp]; }; orsk = derive2 { name="orsk"; version="1.0-5"; sha256="19bpvsdjwjm62a2kfh3xjpqnn39kls656kh832frkqa08bdd7zjk"; depends=[BB BHH2]; }; @@ -11162,16 +11191,17 @@ in with self; { osDesign = derive2 { name="osDesign"; version="1.7"; sha256="0y68pnsmq4nlmfsn28306q2kxab200pirr6ha0w4himzpnw1sil3"; depends=[]; }; osc = derive2 { name="osc"; version="1.0.5"; sha256="00a0ys5ni0hg5zxi0sr5ak3n4c252vhvd6gynnx1b0lqna7bz9qi"; depends=[raster]; }; osd = derive2 { name="osd"; version="0.1"; sha256="1py9p15nrcydr8w9ilxkxabiz9zlqnls8xn9avjkxd8x6602jx6p"; depends=[JADE nnls]; }; + osfr = derive2 { name="osfr"; version="0.2.8"; sha256="1yzi8k6ddr8kfgsliigbwzaiqapqa65ismbvxn30ny6raa4rf2xx"; depends=[crul fs httr jsonlite memoise purrr rlang stringi tibble]; }; oshka = derive2 { name="oshka"; version="0.1.2"; sha256="02hglpq5lknq93zbcf219lhnhppzgygkhxqixb15f89rxf9fczgs"; depends=[]; }; osmar = derive2 { name="osmar"; version="1.1-7"; sha256="0q6d8nw7d580bnx66mjc282dx45zw9srczz90b520hjcli4w3i3r"; depends=[geosphere RCurl XML]; }; - osmdata = derive2 { name="osmdata"; version="0.1.2"; sha256="1zz3ba2f74fllpg5ggbhyixzdkrz4kxmk74ml717kjh49kj3wl4j"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp tibble xml2]; }; + osmdata = derive2 { name="osmdata"; version="0.1.3"; sha256="1a57fg8j7ski050l17hv137mlb5ir7qx7212y9d49arbwlh9bpcq"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp tibble xml2]; }; osmose = derive2 { name="osmose"; version="0.1.1"; sha256="0fiijnrvvydhj6j9yb02rn5sg8arcpj3jz977m2zwjgqy878cffg"; depends=[rlist stringr]; }; osmplotr = derive2 { name="osmplotr"; version="0.3.2"; sha256="0k5rjxsi1sfcxcl6lf8zcncqnshz2jaz7hcwn2ifg4yhvxvkfma8"; depends=[curl e1071 ggm ggplot2 httr mapproj osmdata rgeos sp spatstat]; }; osqp = derive2 { name="osqp"; version="0.6.0.3"; sha256="1266n04c8zsv4ixf7y25jkccv9lx3rvmd7bnkxynbwga9psd3l0j"; depends=[Matrix R6 Rcpp]; }; osrm = derive2 { name="osrm"; version="3.3.2"; sha256="10adkq8sm0jvyd35m8vvjxiqvay976fsgffyxh9sh564l053srkp"; depends=[gepaf isoband jsonlite lwgeom RCurl sf sp]; }; osrmr = derive2 { name="osrmr"; version="0.1.35"; sha256="1pmsybyqkgpqz0yhfmwrsa2smgmclxzk9mlzcqmm8ph6dcd1x0s8"; depends=[assertthat bitops R_utils rjson stringr]; }; otinference = derive2 { name="otinference"; version="0.1.0"; sha256="1l75jjnkyk8yzaw9zyk45jq9ys304i6pzm2xd5apxrb1jk75a3li"; depends=[MASS Rglpk sm transport]; }; - otpr = derive2 { name="otpr"; version="0.2.0"; sha256="1l34fda1y1y359khr1flwk7848rq7hhfmkqnifxhdsz73i2hcrr0"; depends=[checkmate geojsonsf httr jsonlite]; }; + otpr = derive2 { name="otpr"; version="0.3.0"; sha256="02p0wiz791023zpwy8dq8blsax2yfji3cpp4b77n7ri1fsisfy39"; depends=[checkmate geojsonsf httr janitor jsonlite]; }; otrimle = derive2 { name="otrimle"; version="1.3"; sha256="1vq2sm3g32cr8x0nzxq9g3zk0qhcd2syzrcvrfx5ncf3i3f9gq5n"; depends=[doParallel foreach mclust]; }; otsad = derive2 { name="otsad"; version="0.2.0"; sha256="1jb6raxm70aywbgs7bdyw8vccy1nj924f4hkpjrlgnvzmy0hyhvs"; depends=[ggplot2 plotly reticulate sigmoid]; }; otuSummary = derive2 { name="otuSummary"; version="0.1.0"; sha256="15sjjkivh37kjcj02s2l8xabn3x1kg348i69kyhbvsbqawh2s9y0"; depends=[fossil reldist reshape2 vegan]; }; @@ -11179,18 +11209,20 @@ in with self; { ouch = derive2 { name="ouch"; version="2.14-1"; sha256="0ddf9bw5lhj8vb0ja78jf99i0smq4rgmm842k4a4ygap41vdyn2b"; depends=[subplex]; }; outForest = derive2 { name="outForest"; version="0.1.0"; sha256="0wkji836xrf7izx3ibrf1ylcm4ph766ih3qd7wqjsjfx2cz5bpjr"; depends=[FNN missRanger ranger]; }; outbreaker = derive2 { name="outbreaker"; version="1.1-8"; sha256="0przz78jzkwl580w83p0aigaykfki2hdzprwqic7dy6yxnpqlpm3"; depends=[adegenet ape igraph]; }; - outbreaker2 = derive2 { name="outbreaker2"; version="1.1.0"; sha256="0ijyrlbg9xg2p7zr1klyd450ffiddp4fa7arxlhdjf7lsxhbl0h9"; depends=[ape ggplot2 magrittr Rcpp visNetwork]; }; + outbreaker2 = derive2 { name="outbreaker2"; version="1.1.1"; sha256="01i8abwg3g352nbrpaf8iahsjc4cbpph993x867yyvgj12nvsgs3"; depends=[ape ggplot2 magrittr Rcpp visNetwork]; }; outbreaks = derive2 { name="outbreaks"; version="1.5.0"; sha256="00369lnh65nfkcbjd5i39irdv2hcwy5cinb2dvv2x4c2q2ax9f0d"; depends=[]; }; outcomerate = derive2 { name="outcomerate"; version="1.0.1"; sha256="07mwml7r98qjgvrp938sqf7klyspz110583j0zwb72j69n4whmrj"; depends=[Rdpack]; }; outliers = derive2 { name="outliers"; version="0.14"; sha256="0vcqfqmmv4yblyp3s6bd25r49pxb7hjzipiic5a82924nqfqzkmn"; depends=[]; }; outliertree = derive2 { name="outliertree"; version="1.1.3"; sha256="07spgpvw665f53ifcsxgdq5q8wm4fsvjmqf7qsbwknlvly06cmcn"; depends=[Rcereal Rcpp]; }; outreg = derive2 { name="outreg"; version="0.2.2"; sha256="04f1x7mxq4swbd7bfwjjgx4838jm6qj4piaighmhcscwrdkxa1cp"; depends=[magrittr reshape2 sandwich stringr tidyr]; }; ouxy = derive2 { name="ouxy"; version="1.1"; sha256="0f07m8zs4vnr0vpsdw1qdzdrq80qyq4477l06w9i3bb0n64yxcaa"; depends=[abc adephylo ape coda EasyABC geiger maps MCMCpack nlme phytools Sim_DiffProc TreeSim]; }; + overdisp = derive2 { name="overdisp"; version="0.1.0"; sha256="0j1rr9grzhlma9hgljxhn70ia268pc6f3gbinrlqky3pg73xjg2k"; depends=[]; }; overlap = derive2 { name="overlap"; version="0.3.2"; sha256="1j3m6ir1chdz0si2fhcw6gs7c9h09bv0chz18rpzxsywww6d4rzy"; depends=[]; }; - overlapping = derive2 { name="overlapping"; version="1.5.4"; sha256="1j3jmv15hy6h4d3v4rwg0796dz6np3pv67xrn2vcgvh1s1rmqnzs"; depends=[ggplot2 testthat]; }; + overlapping = derive2 { name="overlapping"; version="1.6"; sha256="0qy5jw4nn4l6rb36sxd9waz7x4g18q42dsk12hvsnan5jyzcdwfn"; depends=[ggplot2 testthat]; }; overlapptest = derive2 { name="overlapptest"; version="1.1"; sha256="0r732za6lm7dk5r237nhadgbpinaz5dmb6f7pn3mbg0plkdy3mff"; depends=[spatstat]; }; overture = derive2 { name="overture"; version="0.4-0"; sha256="1s16x5kn0apb0w1f7hqzcsqvw3x621y5n6yr1qn7yb7431pdw3cz"; depends=[bigmemory]; }; owdbr = derive2 { name="owdbr"; version="1.0.1.1"; sha256="0q4654zr5aw04sssy7127vafry72b7p3d8i44fqvqg3055awin0i"; depends=[data_table dplyr httr jsonlite magrittr tibble]; }; + owl = derive2 { name="owl"; version="0.1.1"; sha256="1wc2i04pn8aimnyqbi02hhzmzi5kmh7ikbjccqbb6zb9i89v7gkx"; depends=[lattice Matrix Rcpp RcppArmadillo]; }; owmr = derive2 { name="owmr"; version="0.8.2"; sha256="0qlb5aw6n06yf8y2gd2fjp8kp3w0xgqh3fka7rxqndgvaqmin1a6"; depends=[httr jsonlite magrittr plyr tibble tidyr]; }; ows4R = derive2 { name="ows4R"; version="0.1-4"; sha256="1chvb7i9a6kalnjacfvwrnp5j0fhr6da6v6llazqarij9njxfing"; depends=[geometa httr openssl R6 rgdal sf XML]; }; oxcAAR = derive2 { name="oxcAAR"; version="1.0.0"; sha256="19inf2bcpfj4jzfym1v5f1w5fkmcycz5jrfc2hf0wsvixy53lfxa"; depends=[jsonlite stringr]; }; @@ -11216,12 +11248,13 @@ in with self; { pack = derive2 { name="pack"; version="0.1-1"; sha256="0x4p8clwp49s2y67y7in530xwhjngnqwagf9xnyb1jp0z3myd3r7"; depends=[]; }; packClassic = derive2 { name="packClassic"; version="0.5.2"; sha256="04a1sg9vx3r0sq54q9kj0kpahp6my246jy3bivgy09g5fjk0dmkj"; depends=[]; }; packHV = derive2 { name="packHV"; version="2.2"; sha256="0bj7zhlz2283y1hfdqdn7xil4wscwri1f5hszarwjwczx4n5sv81"; depends=[survival WriteXLS]; }; - packMBPLSDA = derive2 { name="packMBPLSDA"; version="0.6"; sha256="0dnj99f8gl5qwn7xjg5jm7hj2ywdmmixbl2ak429ygilf8hlxzwd"; depends=[ade4 DiscriMiner doParallel FactoMineR foreach MASS pROC]; }; + packMBPLSDA = derive2 { name="packMBPLSDA"; version="0.8.0"; sha256="0jn47zhcfssa2rwjh8jc2zc93g766pslxx8vjm0bsnzyzjl2yqb9"; depends=[ade4 DiscriMiner doParallel FactoMineR foreach MASS pROC]; }; packS4 = derive2 { name="packS4"; version="0.9.3"; sha256="0kkh4lfdbr2ydyfpymwrdkms1d4mj8430p6vxvj5wrgl4vh85gwd"; depends=[codetools]; }; packageDiff = derive2 { name="packageDiff"; version="0.1"; sha256="0qxgx2ac0x7p9j9clj7hgjahf7xwzcjkcw0d2n6w0r9c4g0mw9w2"; depends=[diffr htmlwidgets]; }; packageRank = derive2 { name="packageRank"; version="0.3.0"; sha256="1617xah0c8rnyjq09k69yrmalfryx921fflpx7k7bk52zwrrblc9"; depends=[cranlogs data_table ggplot2 memoise RCurl rversions]; }; packagedocs = derive2 { name="packagedocs"; version="0.4.0"; sha256="0zw9ana7s42ardphhdaklba02yjj1v8gliq4l98397mjmzc6f4xd"; depends=[crayon devtools digest evaluate highlight htmltools lazyrmd magrittr rmarkdown stringr whisker yaml]; }; - packagefinder = derive2 { name="packagefinder"; version="0.1.5"; sha256="11dv9684370jnk4lsyqnqcqngrix3fwjhlhgsar6m01vvhy9w1c0"; depends=[crayon formattable httr jsonlite lubridate pander stringr tidyr]; }; + packagefinder = derive2 { name="packagefinder"; version="0.2.0"; sha256="0n4pqkik5im6dcf67kbp0gvvi0wjsfs3dj9kxy1nk6six98rnyz0"; depends=[crayon formattable htmlTable httr jsonlite lubridate pander stringr textutils tidyr]; }; + packager = derive2 { name="packager"; version="1.1.0"; sha256="1fsdh21ahhxrw77a3nwib0hypb5wn4xhz02qmm7r6z9bkg5njhak"; depends=[callr checkmate codetools crayon cyclocomp desc devtools fakemake git2r httr pkgbuild pkgload rcmdcheck remotes rprojroot usethis whisker whoami withr]; }; packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; }; packcircles = derive2 { name="packcircles"; version="0.3.3"; sha256="0gik0splf48zfl40297nh7lbgvd2qqlci99wv841mfy7858ai933"; depends=[Rcpp]; }; packrat = derive2 { name="packrat"; version="0.5.0"; sha256="1xy5dd2hrpqa07jfl4s7dsrya05mf36ms74j833scdz0zf89586n"; depends=[]; }; @@ -11232,7 +11265,7 @@ in with self; { padr = derive2 { name="padr"; version="0.5.0"; sha256="1lckaizlffgdzs7rhlkafam2clqkn3130r4fdnanm2bvd6b0z220"; depends=[dplyr lubridate Rcpp rlang]; }; paf = derive2 { name="paf"; version="1.0"; sha256="0wrqn67jfrjjxwcrkka6dljgi3mdk00vfjkzzcv2v7c97gx1zvwn"; depends=[survival]; }; pafdR = derive2 { name="pafdR"; version="1.0"; sha256="1yimsd4h23hcf752p5flda3dqk8hgn6qm9k0pmbapxj4jbsw14w5"; depends=[curl exams stringr]; }; - pagedown = derive2 { name="pagedown"; version="0.7"; sha256="1qvi327y6mll8ig1gnvbvyq4m9apw7ayh6i9bjzrwds0x8s4f3bp"; depends=[bookdown htmltools httpuv jsonlite later processx rmarkdown servr websocket xfun]; }; + pagedown = derive2 { name="pagedown"; version="0.9"; sha256="018hd456y58qn887v58hrzwij18s03rvizkj1gdays0z5pbzpspp"; depends=[bookdown htmltools httpuv jsonlite later processx rmarkdown servr websocket xfun]; }; pagenum = derive2 { name="pagenum"; version="1.1"; sha256="0908rlr9sd1a2qwz0idw8ccxhji73sk24gyrdl071lpnd1rs2wl7"; depends=[]; }; pageviews = derive2 { name="pageviews"; version="0.3.0"; sha256="031y67nqqvf3fa2273m7z2cldda0ijh63qwkh4gis3hz9hfril0v"; depends=[curl httr jsonlite]; }; painter = derive2 { name="painter"; version="0.1.0"; sha256="0qr6p13h50rlavcsamxmijfr4dfrbv1k088m28qf8a4gam3ap85b"; depends=[]; }; @@ -11240,9 +11273,9 @@ in with self; { pairedCI = derive2 { name="pairedCI"; version="0.5-4"; sha256="03wf526n3bbr2ai44zwrdhbfx99pxq1nbng9wsbndrdg2ji4dar2"; depends=[]; }; pairheatmap = derive2 { name="pairheatmap"; version="1.0.1"; sha256="1awmqr5n9gbqxadkblpxwcjl9hm73019bwwfwy1f006jpn050d6l"; depends=[]; }; pairsD3 = derive2 { name="pairsD3"; version="0.1.0"; sha256="0ql6pqijf24pfyid52hmf5fmh4w1ca3sm47z9vknqpnjbn47v8q2"; depends=[htmlwidgets shiny]; }; - pairwise = derive2 { name="pairwise"; version="0.4.4-5.1"; sha256="0j15qbpym0y9ipc4l3z95f0bzc0pgzayspyqv81p7xakksnj2y02"; depends=[]; }; + pairwise = derive2 { name="pairwise"; version="0.4.4-7"; sha256="1cgan403p9p08q3cwxnfwgrjg1l23dpmy4fjzcfla6mw24qn60wh"; depends=[]; }; pairwiseCI = derive2 { name="pairwiseCI"; version="0.1-27"; sha256="0yp9nibdrsddjqq6vdlfbpvmfgm209h99b6qqqd6wgfzng327822"; depends=[boot coin MASS MCPAN mcprofile]; }; - pairwiseComparisons = derive2 { name="pairwiseComparisons"; version="0.1.3"; sha256="1m36zm49alsw871lh0can5c6hjsdpb23vchh8srg0rgd2zxnaw5q"; depends=[broomExtra dplyr forcats jmv purrr rlang stringr tibble tidyr WRS2]; }; + pairwiseComparisons = derive2 { name="pairwiseComparisons"; version="0.2.5"; sha256="1kvpa05102vy2dgcg7x7dmj2dk8h2z8ncpfcjfihaw32nabcrprx"; depends=[dplyr forcats ipmisc jmv purrr rlang tibble tidyr WRS2]; }; pak = derive2 { name="pak"; version="0.1.2"; sha256="05s8rg84w4xhpbaa98p3lgvsnbjrxfbcz5izgkamqa1dw4gdxml4"; depends=[assertthat base64enc callr cli cliapp crayon curl desc filelock glue jsonlite lpSolve pkgbuild pkgcache prettyunits processx ps R6 rematch2 rprojroot tibble]; }; palaeoSig = derive2 { name="palaeoSig"; version="2.0-3"; sha256="1sn2nbiq037l81qvrqbg7gf1312g8vy574hsfng07qk1jpx7vwkk"; depends=[assertr dplyr forcats ggplot2 ggrepel magrittr MASS mgcv purrr rioja rlang TeachingDemos tibble tidyr vegan]; }; palasso = derive2 { name="palasso"; version="0.0.7"; sha256="1r7kcx0i1xqvqpqwvh5khsv3g0hj3j8f56q9jbya18scywk2ivzg"; depends=[glmnet Matrix survival]; }; @@ -11252,17 +11285,17 @@ in with self; { paleofire = derive2 { name="paleofire"; version="1.2.4"; sha256="1vgai4my6kl0fldghp6a1qr8xhxiyw137kd80d0zir6q47nlnc2x"; depends=[GCD ggplot2 lattice locfit plyr raster rgdal]; }; paleomorph = derive2 { name="paleomorph"; version="0.1.4"; sha256="05l55miahkmj8ikq8qz20y6kgxvxmdf04kji898i7fp8qyj4vfpa"; depends=[]; }; paleotree = derive2 { name="paleotree"; version="3.3.25"; sha256="04l7mh198sm1j8b75ydm7sq55l3nnwns29wj8cli4n3m009bjr5a"; depends=[ape jsonlite phangorn phytools png RCurl]; }; - paletteer = derive2 { name="paletteer"; version="1.0.0"; sha256="02r7d78pvbw0xyghvngacqn0sg2zh8g8qldi8ix7khvxgh03xlvy"; depends=[gameofthrones ggthemes glue harrypotter jcolors oompaBase palr pals prismatic rematch2 rlang rstudioapi scico viridisLite]; }; + paletteer = derive2 { name="paletteer"; version="1.1.0"; sha256="0w81ssvykqaamsdwc27m57x2cl4qmby1ny18aj0fihsh2rk5cg02"; depends=[gameofthrones ggthemes harrypotter jcolors oompaBase palr pals prismatic rematch2 rlang rstudioapi scico viridisLite]; }; palettesForR = derive2 { name="palettesForR"; version="0.1.2"; sha256="0nkb0dszj3a9ba7w6kfyn8lxacqsjw60i87p3g2gyl098kjwv7qv"; depends=[]; }; palettetown = derive2 { name="palettetown"; version="0.1.1"; sha256="1kjj1sqib1ns7895plp8c7h317pxwbyxi2shjkcgadkcsv2yjsxn"; depends=[]; }; palinsol = derive2 { name="palinsol"; version="0.93"; sha256="0k29sl2j7yf4yc0dhb047rxwg9np9l6pdwv6wyb4j80yc07vc9am"; depends=[gsl]; }; palm = derive2 { name="palm"; version="1.1.3"; sha256="1w13a1517h9dqfkc0863fsb08mapx8cafypk3b61djh69hcpbl0v"; depends=[gsl minqa mvtnorm R6 Rcpp spatstat]; }; palmtree = derive2 { name="palmtree"; version="0.9-0"; sha256="0cd5p82gp2g1zq8kf9ybi4wa1r2jg4dbxbp5n01qs4apmyyncl4d"; depends=[Formula partykit]; }; - palr = derive2 { name="palr"; version="0.1.0"; sha256="1v0bajsnzqamx9y275qhvzp56vzzs3hyp4mr5ijqynqj4376fqys"; depends=[]; }; + palr = derive2 { name="palr"; version="0.2.0"; sha256="0c9fg3kbl2n6m01ck2pmavgxbk953vdxqsc3cw6phnnav93kr5cf"; depends=[]; }; pals = derive2 { name="pals"; version="1.6"; sha256="18bl15figc9mhlvxz71da6s2mzyja6rdb2cpm6h5vya1lpv3snmk"; depends=[colorspace dichromat mapproj maps]; }; pamctdp = derive2 { name="pamctdp"; version="0.3.2"; sha256="0qs8lj5g2fx5rfd0afv76x9x7wqm333qmjv6zzip6pf11dzkghyj"; depends=[ade4 FactoClass xtable]; }; pamm = derive2 { name="pamm"; version="1.121"; sha256="191f0g90s1m3w68mszmdsdv5yw7xd1vsdbwsfvmyydgxn4261pwk"; depends=[lattice lme4 lmerTest mvtnorm]; }; - pammtools = derive2 { name="pammtools"; version="0.1.14"; sha256="1zr8n6j9220qv3a2q309n1ckjd4b6l2k24kfx3p4wibam8g9pqbc"; depends=[checkmate dplyr Formula ggplot2 lazyeval magrittr mgcv msm mvtnorm purrr rlang survival tibble tidyr]; }; + pammtools = derive2 { name="pammtools"; version="0.2.2"; sha256="03znv9ajy1y5lks42d8vhd7a20n9hv8xnrl6mxw7cjhh94h1x1gl"; depends=[checkmate dplyr Formula ggplot2 lazyeval magrittr mgcv mvtnorm pec purrr rlang survival tibble tidyr]; }; pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; }; pamr = derive2 { name="pamr"; version="1.56.1"; sha256="0ycpgkk23y3zzkb42n2skcyl35ps1n7jmyzfj7pbxr3f6gr2grfh"; depends=[cluster survival]; }; pan = derive2 { name="pan"; version="1.6"; sha256="1dk3jjj826p7xrz10qz04vyc068xnypg7bp0pj4c32z3da0xzh5d"; depends=[]; }; @@ -11273,7 +11306,7 @@ in with self; { panelView = derive2 { name="panelView"; version="1.1.2"; sha256="0kbh2g8yynv2mvvndy89lkm5yhy2hr04z52i2ccv9yfrkyignlfp"; depends=[ggplot2 gridExtra]; }; panelWranglR = derive2 { name="panelWranglR"; version="1.2.13"; sha256="0zj0m08518zi6xsa7qik61ys1qqa2lqiar4l7acclkw58w5zrmbc"; depends=[caret data_table Hmisc]; }; panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; }; - panelr = derive2 { name="panelr"; version="0.7.1"; sha256="0xd3f3acfjvnryhwdf3aqa3vgpagl87sgd7annn29rk3lznv8rv2"; depends=[crayon dplyr Formula ggplot2 jtools lme4 lmerTest magrittr purrr rlang stringr tibble]; }; + panelr = derive2 { name="panelr"; version="0.7.2"; sha256="1xbhrz4lpxxyraiyyh1dqh3fpck3gx5yd8laibzqb7mxb0ili2n7"; depends=[crayon dplyr Formula ggplot2 jtools lme4 lmerTest magrittr purrr rlang stringr tibble]; }; panelvar = derive2 { name="panelvar"; version="0.5.2"; sha256="1rr7d0cyz6afxhwqslvcnbfb03cizpfldzwsfnkzxqmxpqasbw80"; depends=[ggplot2 knitr MASS Matrix matrixcalc progress reshape2 texreg]; }; pangaear = derive2 { name="pangaear"; version="1.0.0"; sha256="0i7k1sdhslw33dzpnrmajynq52svg8ri4mxz6aww2cah9y8vxlzl"; depends=[crul hoardr jsonlite oai png tibble xml2]; }; papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; }; @@ -11283,13 +11316,12 @@ in with self; { parade = derive2 { name="parade"; version="0.1"; sha256="07x02j9jlldz4p0cyhw292041l3pziv56bhbzp4f0qpxhcbn5zn4"; depends=[]; }; paradox = derive2 { name="paradox"; version="0.1.0"; sha256="00rhn8vwlcl4gnvgkqbaqyx9j1ymmgmqjry3smhc5xqnclx2spzs"; depends=[backports checkmate data_table mlr3misc R6]; }; parallelDist = derive2 { name="parallelDist"; version="0.2.4"; sha256="0gqf9vi9hlbflxj941jv7hli8jiy2sqg8b312h401f8rkfqa9ckv"; depends=[Rcpp RcppArmadillo RcppParallel]; }; - parallelMCMCcombine = derive2 { name="parallelMCMCcombine"; version="1.0"; sha256="05krkd643awqhfrylq9lxr2cmgvnm1msn2x8p1l1483n2gzyklz7"; depends=[mvtnorm]; }; parallelML = derive2 { name="parallelML"; version="1.2"; sha256="05j0rb81i8342m8drwgmgi1w30q96yf501d83cdq4zhjbchphbl1"; depends=[doParallel foreach]; }; parallelMap = derive2 { name="parallelMap"; version="1.4"; sha256="0nzd4vzdmqahvzccav4w0rbyi7lh41yb2s47472z2agp4piiavzv"; depends=[BBmisc checkmate]; }; parallelSVM = derive2 { name="parallelSVM"; version="0.1-9"; sha256="0nhxkllpjc3775gpivj8c5a9ssl42zgvswwaw1sdhwg3cxcib99h"; depends=[doParallel e1071 foreach]; }; parallelize_dynamic = derive2 { name="parallelize.dynamic"; version="0.9-1"; sha256="03zypcvk1iwkgy6dmd5bxg3h2bqvjikxrbzw676804zi6y49mhln"; depends=[]; }; - paramGUI = derive2 { name="paramGUI"; version="2.1.3"; sha256="1z7k4wgzm1bga8djyk44r1kr1mzdb9mrd6fvb5nrd69d76pvldji"; depends=[colorspace fields shiny shinydashboard TIMP]; }; - parameters = derive2 { name="parameters"; version="0.4.1"; sha256="0xkdn1079sr6kgyhc1zmn9imca4bghnxs3f91h0z7vkzjj73qdbi"; depends=[bayestestR insight]; }; + paramGUI = derive2 { name="paramGUI"; version="2.1.4"; sha256="0k2wkl99ji3w7xmd9k7zzvrr3dbf3237q7lxm527dnrq331pmxmi"; depends=[colorspace fields shiny shinydashboard TIMP]; }; + parameters = derive2 { name="parameters"; version="0.6.0"; sha256="0zin3ikc013hc713n5zs0dbhc3m4nfw1vhc3924z0mrww8r241xn"; depends=[bayestestR insight]; }; paramhetero = derive2 { name="paramhetero"; version="0.2.0"; sha256="16gvs8328bnqvhx47f0xwnmbmlakxmp4ivnjxk2b13z6qjs70ij4"; depends=[ggplot2 ggpubr lme4 survey]; }; paramlink = derive2 { name="paramlink"; version="1.1-2"; sha256="0y6wsrxwyavipmrjjznr2n920w0p6qlwapxc9mnkh9c6w3yznka2"; depends=[assertthat kinship2 maxLik]; }; params = derive2 { name="params"; version="0.6.1"; sha256="0w7k8k7z8p1y2w0dhpfssa868xaikfzfdjw2vlj1yl299k5yisax"; depends=[whisker]; }; @@ -11300,7 +11332,6 @@ in with self; { parcoords = derive2 { name="parcoords"; version="1.0.0"; sha256="15w0g789a2igagfrgv1978ib4ipxpfkid5jpj4q344mpdvgp6ip2"; depends=[crosstalk htmlwidgets]; }; parcor = derive2 { name="parcor"; version="0.2-6"; sha256="10bhw50g8c4ln5gapa7wghhb050a3jmd1sw1d1k8yljibwcbbx36"; depends=[Epi GeneNet glmnet MASS ppls]; }; parfm = derive2 { name="parfm"; version="2.7.6"; sha256="1n548gaf62m56n8rlcz1mhpqxikd33vydjwl4wps441drp1dbvs0"; depends=[msm optimx sn survival]; }; - parglm = derive2 { name="parglm"; version="0.1.4"; sha256="15xwij5nq95dykmg4i356fm8pf4ml8vxcphwnr14371bk3l026vl"; depends=[Matrix Rcpp RcppArmadillo]; }; parlitools = derive2 { name="parlitools"; version="0.4.1"; sha256="05xii25acmbdbhrkwgw812352vhxqpp5m8qbl346bp6v74ixi8aj"; depends=[dplyr hansard mnis readr sf snakecase stringi]; }; parma = derive2 { name="parma"; version="1.5-3"; sha256="0yjpmxz20v6k107qylw42yf1b231hzym9dizjcq1kalivvscczc5"; depends=[corpcor nloptr quadprog Rglpk slam truncnorm]; }; parmigene = derive2 { name="parmigene"; version="1.0.2"; sha256="1fsm6pkr17jcbzkj1hbn91jf890fviqk1lq6ls8pihsdgah1zb4d"; depends=[]; }; @@ -11308,7 +11339,7 @@ in with self; { parsec = derive2 { name="parsec"; version="1.2.3"; sha256="142zxj34qsf0s537bcabf04yi2qfmy65bgczpkvbyv5vkajxl10v"; depends=[igraph netrankr]; }; parsedate = derive2 { name="parsedate"; version="1.2.0"; sha256="0gb3w6hmwxayhijpf36p5dk4h6bbdps57x3cgikwvvxkgi83rarr"; depends=[rematch2]; }; parsemsf = derive2 { name="parsemsf"; version="0.1.1"; sha256="0ks4503k06ib5lq4ar2rg0sdni99rjcqxj76b0mclasxbi07kjsa"; depends=[DBI dbplyr dplyr lazyeval RSQLite stringr tidyr]; }; - parsetools = derive2 { name="parsetools"; version="0.1.1"; sha256="0fl06h4aph0rr55n3c4gw9wkblvjipgyl5drpycmpldj8kix1nz2"; depends=[]; }; + parsetools = derive2 { name="parsetools"; version="0.1.2"; sha256="0rdznny4wqq721ikcarpf4lcp9cb6911zpvjsn37flnclhvjwj0i"; depends=[]; }; parsnip = derive2 { name="parsnip"; version="0.0.5"; sha256="1y3bkxkk1ib5p6zzz5js28n761rmxgws3rl1ravq37vk0h16bhg1"; depends=[dplyr generics globals glue magrittr prettyunits purrr rlang tibble tidyr vctrs]; }; partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; }; partialAR = derive2 { name="partialAR"; version="1.0.11"; sha256="1x7vsrjn91nr4bbkzz9mp8h93j9yhwwaqw1abh5n3bsrkq3xmgqj"; depends=[data_table ggplot2 KFAS MASS plot3D Rcpp tseries urca zoo]; }; @@ -11323,8 +11354,8 @@ in with self; { partitions = derive2 { name="partitions"; version="1.9-22"; sha256="1qqy4df28wy4q0g572azrj171jlhvrnzbh7x0wr2g7v6gr20y0ns"; depends=[gmp polynom sets]; }; partools = derive2 { name="partools"; version="1.1.6"; sha256="0w7p88y4ab4v14k16k95cyb5f3yl2g6ban11775rmi2h9xqkfxk8"; depends=[data_table pdist regtools]; }; partsm = derive2 { name="partsm"; version="1.1-2"; sha256="0cv3lgkdkn97bc85iwlv9w5pmqwwwsgb717zxnbgb5mzf4xn3f3g"; depends=[]; }; - party = derive2 { name="party"; version="1.3-3"; sha256="1sbwpwxdz81ikp64kc0s06vdwy04bccff2kr0phwx9235nhfwwlz"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; - partykit = derive2 { name="partykit"; version="1.2-5"; sha256="17324y5v65i0va2mvm26gl89s01xwcffg34fwq1mvylk1xwk13pl"; depends=[Formula inum libcoin mvtnorm rpart survival]; }; + party = derive2 { name="party"; version="1.3-4"; sha256="0zqyyzpri61kj300b6kqspfhwqvx4c8svia726cg33lnwx7vv2bn"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; + partykit = derive2 { name="partykit"; version="1.2-7"; sha256="1h8jld63mm7ri9cny8jz0cibma68n7p66qvyn9g0jx99kir3r6aw"; depends=[Formula inum libcoin mvtnorm rpart survival]; }; parviol = derive2 { name="parviol"; version="1.1"; sha256="1sfgic86ssd5wjf9ydss9kjd3m4jmm2d1v896sjsv8bydwymbpx3"; depends=[vioplot]; }; pass_lme = derive2 { name="pass.lme"; version="0.9.0"; sha256="1rxm509vnkdvdxii4jwniirdb2pv90rjkf6wjc9zrjh88jrl678k"; depends=[]; }; passport = derive2 { name="passport"; version="0.2.0"; sha256="1jiwivrz7781zmwxmw13rxl80cr9r5pinnk5bvqz8nhfmlx0zmgd"; depends=[]; }; @@ -11334,7 +11365,6 @@ in with self; { pastis = derive2 { name="pastis"; version="0.1-2"; sha256="0211pzj3xrmqgxjpspij95kmlpa2klpicw49n6pnz2g1fapjy2bd"; depends=[ape caper]; }; patPRO = derive2 { name="patPRO"; version="1.1.0"; sha256="1l6q6glklmfgivs4gw0v8q4qa57wr2bna477sn2v401hcwmgnfyn"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; patchDVI = derive2 { name="patchDVI"; version="1.9.1616"; sha256="1akdlzw8v2p1zz09bm88d63jyxj7fv5h50p459p9ml4yc816xvji"; depends=[]; }; - patchPlot = derive2 { name="patchPlot"; version="0.1.5"; sha256="1b4k0dvvj6qwyxbqb36knyrawvy5qq8hl45pz896c9rkqhlg02bx"; depends=[datautils]; }; patchSynctex = derive2 { name="patchSynctex"; version="0.1-4"; sha256="1li3kw7a77sx6dss8pnxzb0p0sdy1kfm1zdnmhhj043zihrryd5p"; depends=[stringr]; }; patchwork = derive2 { name="patchwork"; version="1.0.0"; sha256="0qrwbcswh7ylrmghi17k6wk7w51cz6mcmvcyyd41hy3m2ywmkywb"; depends=[ggplot2 gtable]; }; patentsview = derive2 { name="patentsview"; version="0.2.2"; sha256="003pcddz6adsh893xvlb9d72r316z14nlp3fwm1vbc50hpa24w6z"; depends=[httr jsonlite]; }; @@ -11348,13 +11378,12 @@ in with self; { patternize = derive2 { name="patternize"; version="0.0.2"; sha256="0hd6l66ybrjjndad5m2li9qqsjd0k2blhvjm469j6ab95073zq9f"; depends=[abind dplyr imager magrittr Morpho purrr raster rgdal RNiftyReg sp vegan]; }; patternplot = derive2 { name="patternplot"; version="0.3.2"; sha256="0bzy1fq9za1251h8iiixyq397wnw9k3s59i3wi2pyjca2dydhr9a"; depends=[dplyr ggplot2 gridExtra gtable jpeg png R6 Rcpp RcppParallel]; }; pauwels2014 = derive2 { name="pauwels2014"; version="1.0"; sha256="1b7whn13lgydc69kg1fhnwkxirw0nqq75cfvii0yg0j4p8r1lw42"; depends=[deSolve ggplot2]; }; - pavo = derive2 { name="pavo"; version="2.3.0"; sha256="0ix4jaqzzz5gqazhm4wmjkwyhk9xkgmwlabns1lyixl57l22p6s7"; depends=[cluster geometry magick pbmcapply plot3D sp viridisLite]; }; + pavo = derive2 { name="pavo"; version="2.4.0"; sha256="1f71plrm5j5k66lw0za1a16rfjbl1gq4cwczybrc9rpzz6a0i6li"; depends=[cluster future_apply geometry lightr magick plot3D progressr sp viridisLite]; }; pawacc = derive2 { name="pawacc"; version="1.2.2"; sha256="0d5k0bq8zmb7sjvba3ljp97mba2iycnw44rnsnn2aajs02l1c2xg"; depends=[SparseM]; }; - pawls = derive2 { name="pawls"; version="1.0.0"; sha256="01sf1cmd216ca5iwmw4hfnxi9lvh16r441cfcaa3n77zhq0i4w7n"; depends=[]; }; paws = derive2 { name="paws"; version="0.1.6"; sha256="1d47i4bjqd1dam98w7wyy3zbqmjb4gaplybzir9sl3k0fwr0sk1n"; depends=[paws_analytics paws_application_integration paws_compute paws_cost_management paws_customer_engagement paws_database paws_machine_learning paws_management paws_networking paws_security_identity paws_storage]; }; paws_analytics = derive2 { name="paws.analytics"; version="0.1.6"; sha256="1wyc8br5vv8cp4axy9vi0asbk9fw3w7nbw5lgwrakz1zs29rhrcy"; depends=[paws_common]; }; paws_application_integration = derive2 { name="paws.application.integration"; version="0.1.6"; sha256="11dyi8pir23zh18z4w516gkgpddx6pz9zzlcrsh6nik0389zrrid"; depends=[paws_common]; }; - paws_common = derive2 { name="paws.common"; version="0.2.5"; sha256="12rjhxqqypckjiiiic1474kbvf0hiv38wz3gj9z8c0wks7sp94ck"; depends=[base64enc digest httr ini jsonlite xml2]; }; + paws_common = derive2 { name="paws.common"; version="0.2.6"; sha256="0zi03h6xjhiw7daqhklrnplxw3q0yvrminhqlwzilqndjm3mvyaa"; depends=[base64enc digest httr ini jsonlite xml2]; }; paws_compute = derive2 { name="paws.compute"; version="0.1.6"; sha256="0ls2d25c9w5hn0h2cw0an06x3fhiff0dnxipws81rxi9vnplqb8g"; depends=[paws_common]; }; paws_cost_management = derive2 { name="paws.cost.management"; version="0.1.6"; sha256="1fwp4v32hkvzjks79ri5732am09dm4mh42iwg5lk5dl16im6xj13"; depends=[paws_common]; }; paws_customer_engagement = derive2 { name="paws.customer.engagement"; version="0.1.6"; sha256="1xsprrm7k7hakhvisfm6j29j9any1rc73cs3ilfcjfqqdf54jkpw"; depends=[paws_common]; }; @@ -11366,44 +11395,45 @@ in with self; { paws_storage = derive2 { name="paws.storage"; version="0.1.6"; sha256="15y1qkzfyyqjqzyh68s17n7qavaq08js8vmx64c93zdlj11y6hag"; depends=[paws_common]; }; pbapply = derive2 { name="pbapply"; version="1.4-2"; sha256="1xmk4p006v8gij26rs6kp5prjyf2n32nqjxiyp8a6kvgyc4z46dc"; depends=[]; }; pbatR = derive2 { name="pbatR"; version="2.2-13"; sha256="01ra1ggdpxdl1xqjdh86qynr5gkgzw01ww6j9bwgx4mj20i6j1ha"; depends=[rootSolve survival]; }; - pbdMPI = derive2 { name="pbdMPI"; version="0.4-2"; sha256="1lbm0a2hm2pxfm1fws4bsh4xk986q9zlqhs1qcdr46m74l3lrq2m"; depends=[float rlecuyer]; }; + pbdBASE = derive2 { name="pbdBASE"; version="0.5-3"; sha256="1f90bk1mp1s03177b9g5w5ni77jzrzc1pl3bjx0w0fjbjs1myn79"; depends=[pbdMPI pbdSLAP]; }; + pbdMPI = derive2 { name="pbdMPI"; version="0.4-3"; sha256="1mxikhr0qfqksr62v5dxvzgqx07391p7ikjk9g2w4xzrzmxs8fc3"; depends=[float rlecuyer]; }; pbdNCDF4 = derive2 { name="pbdNCDF4"; version="0.1-4"; sha256="0fd29mnbns30ck09kkh53dgj24ddrqzks4xrrk2hh1wiy7ap1h95"; depends=[]; }; pbdPROF = derive2 { name="pbdPROF"; version="0.4-0"; sha256="174jwrkvw5qz1430y6id01w1czlw45j1yw8a8dyw36knrmvmdz10"; depends=[]; }; pbdRPC = derive2 { name="pbdRPC"; version="0.2-1"; sha256="1pz71zfs9qw96dj3h5mrm734vbbi4drlv9hrw91dbzm3a7jsxg4q"; depends=[]; }; - pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-8"; sha256="0xwg3yr6125iyhq80qjh3vjs2akxnfgh66h372dsniv89x8qaaaz"; depends=[pbdMPI rlecuyer]; }; + pbdSLAP = derive2 { name="pbdSLAP"; version="0.3-0"; sha256="1jxpgsxkzi3s1qf3g01xma9mqwgi1b22x5lh5xnr78wa0764dyd3"; depends=[pbdMPI rlecuyer]; }; pbdZMQ = derive2 { name="pbdZMQ"; version="0.3-3"; sha256="1jkfcfhspvqra7vbllrvkz3jx8j7d0ang6zzcdjgpb7200sc29mf"; depends=[]; }; pbivnorm = derive2 { name="pbivnorm"; version="0.6.0"; sha256="05jzrjqxzbcf6z245hlk7sjxiszv9paadaaimvcx5y5qgi87vhq7"; depends=[]; }; - pbkrtest = derive2 { name="pbkrtest"; version="0.4-7"; sha256="1si3bhi59xc51a0pgjjglccq3h4aljyhw2k1b8574s145fnh7fsw"; depends=[lme4 MASS Matrix]; }; + pbkrtest = derive2 { name="pbkrtest"; version="0.4-8.6"; sha256="0s5xhhrhv5i9680lw6af9lj2x4jc3fygmzzk0jjpxnb8g4b3p1jz"; depends=[lme4 magrittr MASS Matrix]; }; pbm = derive2 { name="pbm"; version="1.1.0"; sha256="054navz4fmn25nq3lsfnsnm35shj9wq4qz69d4ajw0q09gnb1cy8"; depends=[]; }; pbmcapply = derive2 { name="pbmcapply"; version="1.5.0"; sha256="0i58gcqpnbyvc448qfgm45b7rpbmrnagsvk1h1hsqchbbicfslnz"; depends=[]; }; pbo = derive2 { name="pbo"; version="1.3.4"; sha256="0v522z36q48k4mx5gym564kgvhmf08fsadp8qs6amzbgkdx40yc4"; depends=[lattice]; }; pbs = derive2 { name="pbs"; version="1.1"; sha256="0cpgs6k5h8y2cia01zs1p4ri8r7ljg2z4x8xcbx73s680dvnxa2w"; depends=[]; }; pbv = derive2 { name="pbv"; version="0.3-19"; sha256="18cypzbyamafq942bwp3k0ml3crwcpxa6rdck8657kkc22lq05g5"; depends=[Rcpp RcppArmadillo]; }; - pcFactorStan = derive2 { name="pcFactorStan"; version="1.3.0"; sha256="1jifdqf9zip16i2sycn05123hmf19rhq2wrdfixfd2rfcbjwcaab"; depends=[BH igraph loo mvtnorm Rcpp RcppEigen reshape2 rstan StanHeaders]; }; + pcFactorStan = derive2 { name="pcFactorStan"; version="1.4.0"; sha256="0fj2732q5kyal8x4s30dxmgpngq9x4wzgjsna5r5lg7izd0s0hk1"; depends=[BH igraph loo mvtnorm Rcpp RcppEigen reshape2 rstan StanHeaders]; }; pcIRT = derive2 { name="pcIRT"; version="0.2.4"; sha256="0crll51s14nisnaxjln7bc3b1a181v358nfkh1p5iiyn98clacl6"; depends=[combinat Rcpp]; }; pcLasso = derive2 { name="pcLasso"; version="1.1"; sha256="1wdwin6xszysydspxjb8b6r3y416ri3zndh0s142b2487lhmqkb6"; depends=[svd]; }; pca3d = derive2 { name="pca3d"; version="0.10.1"; sha256="1fz7p95hhvgzlh1vxlifyzbqccv4rsm7yldzca5p0dwm4rgsdkd4"; depends=[ellipse rgl]; }; pcaBootPlot = derive2 { name="pcaBootPlot"; version="0.2.0"; sha256="1320d969znk9xvm1ylhc3a31nynhzyjpbg1fsryq72nhf8jxijaa"; depends=[FactoMineR RColorBrewer]; }; - pcaL1 = derive2 { name="pcaL1"; version="1.5.3"; sha256="1pf1vsprng83yd4j0rhx4fvj54fr2ra4wng61bw9npzmnshkymwk"; depends=[]; }; + pcaL1 = derive2 { name="pcaL1"; version="1.5.4"; sha256="1myl12537bxwmyicm8v891rflq8g6bhz9j0gcjcqgf9z80y52ayc"; depends=[]; }; pcaPP = derive2 { name="pcaPP"; version="1.9-73"; sha256="1z2kdf9gfp965xbcd4rg6vf20d1bl443na0qjkpq7gmzpaq6cifa"; depends=[mvtnorm]; }; - pcadapt = derive2 { name="pcadapt"; version="4.1.0"; sha256="0631qx37ffz21bgwvjq2y5xn4dvz6kpmwg3rlmkxa93kwsx2b7rb"; depends=[data_table ggplot2 magrittr mmapcharr plotly Rcpp rmio robust RSpectra vcfR]; }; - pcalg = derive2 { name="pcalg"; version="2.6-8"; sha256="1pp7y0v3li8y5q599cz10ws6nql4xqdmgxfjp69h1dmc5635kr06"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; + pcadapt = derive2 { name="pcadapt"; version="4.3.1"; sha256="0xa2dsr0f0a5kdbnbf3c4fznzvv9s3h3yp1wfgjyd8ilp4lk8nlx"; depends=[bigutilsr data_table ggplot2 magrittr mmapcharr Rcpp rmio RSpectra]; }; + pcalg = derive2 { name="pcalg"; version="2.6-10"; sha256="0sjxkbplrdgql2xap8p3025n7hnmp5cf5j17bay5riv3wwhfd225"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; pccc = derive2 { name="pccc"; version="1.0.3"; sha256="1dd1kh0gx7ffwnmxqn3zbcsxiav4z70psis24dgqxwq42r0kw5mk"; depends=[dplyr Rcpp]; }; pcdpca = derive2 { name="pcdpca"; version="0.4"; sha256="0ys4hrin0w3f87d1d986wvrfkfwapzj9hz7d7v92r60ns74g7r5m"; depends=[fda freqdom]; }; + pcds = derive2 { name="pcds"; version="0.1.0"; sha256="0a7ac4znqq73gdwiamdmj9kgczcmxngg47yqqrmn5mqfi5cxfwss"; depends=[combinat interp plot3D plotrix Rdpack]; }; pcensmix = derive2 { name="pcensmix"; version="1.2-1"; sha256="1yrz4hdj52in8z65qyl18kh7frv75rb8ss5ljv3vbm6yhxi32jnd"; depends=[]; }; pcev = derive2 { name="pcev"; version="2.2.2"; sha256="1l0afcdzkxzkhkc8ln2fzi50hc7nfq46lg6hhx6rrzkb41w82iqw"; depends=[corpcor RMTstat]; }; pcg = derive2 { name="pcg"; version="1.1"; sha256="194j72hcp7ywq1q3dd493pwkn1fmdg647gmhxcd1jm6xgijhvv87"; depends=[]; }; pcgen = derive2 { name="pcgen"; version="0.2.0"; sha256="1v2fmxbj9gz5sg0hizw03ad8cfm9v25708h7fvnf6gb42b2mmyb3"; depends=[ggm graph Hmisc lme4 MASS Matrix pcalg sommer]; }; - pch = derive2 { name="pch"; version="1.3"; sha256="13pfrvp539fz4hxp08yil93caw3cjdna7xnky5fqd0lhc84fwq76"; depends=[survival]; }; + pch = derive2 { name="pch"; version="1.4"; sha256="0vfx0jirmfcy47l6xw1yvss68624605378cpqc58ygllwddcqz1y"; depends=[survival]; }; pcmabc = derive2 { name="pcmabc"; version="1.1"; sha256="1x4qvs5v134z93j1r3zg08kynqyhgd2yc3y2vk0vif8mabvx3zv4"; depends=[ape mvSLOUCH phangorn TreeSim yuima]; }; pcnetmeta = derive2 { name="pcnetmeta"; version="2.6"; sha256="0rpd1bgg932xhj03fnskhbg7ni9nfd8qrvxvix8qmbgw8bwdsbgd"; depends=[coda rjags]; }; pco = derive2 { name="pco"; version="1.0.1"; sha256="0k1m450wfmlym976g7p9g8arqrvnsxgdpcazk5kh3m3jsrvrcchf"; depends=[]; }; - pcr = derive2 { name="pcr"; version="1.2.0"; sha256="0817ibih6rs52g560z8cbw2zpr0hbzrz94c913x4114w1k737bq9"; depends=[ggplot2]; }; - pcrcoal = derive2 { name="pcrcoal"; version="1.2.0"; sha256="0rd610ny8p7by3gi6kk130ii0qcswqsng5mzmxz8hrxqk0cs4c9x"; depends=[ape ggplot2 phylosim]; }; + pcr = derive2 { name="pcr"; version="1.2.1"; sha256="1yjr1fffcmmy0jgzj842hg1iiwfwppqqz8yh9mj3v5mikv6cv51i"; depends=[ggplot2]; }; pcrsim = derive2 { name="pcrsim"; version="1.0.2"; sha256="04177xl513k01prmf93kha91dyxmb9v80d1y4lz73fxsifj6bhar"; depends=[data_table ggplot2 gWidgets mc2d plyr strvalidator]; }; pcse = derive2 { name="pcse"; version="1.9.1.1"; sha256="1rb9146vjkf36vc5v3frykmsff7kp6qp1hhmj8pak583in4rz8f8"; depends=[]; }; - pct = derive2 { name="pct"; version="0.2.7"; sha256="1bpmfrdidnz1aqg8llz00rrvk70f7gy2jdb0i8l3kvf8gg3ws3qb"; depends=[boot readr sf stplanr]; }; - pcts = derive2 { name="pcts"; version="0.14-3"; sha256="16ldn685ninrnn095wnckfki12jicwj15m9806a0dw1g51qy1699"; depends=[BB gbutils lagged ltsa lubridate Matrix mcompanion PolynomF Rdpack sarima zoo]; }; + pct = derive2 { name="pct"; version="0.4.0"; sha256="0wsf3n1yisxjcd9gbfx94671bkfdh2j4il6c6gdqmr6wkj0n74kp"; depends=[boot readr sf stplanr]; }; + pcts = derive2 { name="pcts"; version="0.14-4"; sha256="0c5r71d6c08g5v5cwvy93fwp1lhmqh99azq8nn1ikfxadi7kndln"; depends=[BB gbutils lagged ltsa lubridate Matrix mcompanion PolynomF Rdpack sarima zoo]; }; pdR = derive2 { name="pdR"; version="1.7"; sha256="05rnyb9znb71ilr9kf62x30knby1rm0p4ain220wvb62vkz054d7"; depends=[boot car coefplot lmtest papeR plm sandwich]; }; pdSpecEst = derive2 { name="pdSpecEst"; version="1.2.4"; sha256="1sf2d7vh7a1qc0cq230an8pzg9qi9g640z0ql8x2pp9wfawfzn1f"; depends=[ddalpha multitaper Rcpp RcppArmadillo Rdpack]; }; pdc = derive2 { name="pdc"; version="1.0.3"; sha256="0503n7aiy0qrl790yfjvpm7bbyz1i4818rlg96q0fvzb58zqmyvc"; depends=[]; }; @@ -11418,6 +11448,7 @@ in with self; { pdp = derive2 { name="pdp"; version="0.7.0"; sha256="0wcszaq4c14f9a2r1gd32mzhs035jlg2w8mkfklzigcj7fv9xmi8"; depends=[ggplot2 gridExtra lattice magrittr mgcv plyr viridis]; }; pdqr = derive2 { name="pdqr"; version="0.2.1"; sha256="1444r51lh66kmhvkp8ivr95zlnxfgv28whl0axwb56hf5vi44lp9"; depends=[]; }; pds3 = derive2 { name="pds3"; version="0.5.0"; sha256="1hipi4ygk30khrrslxq3m9qdichazhrl34k444shs7gi6wjx9ilr"; depends=[rly]; }; + pdynmc = derive2 { name="pdynmc"; version="0.8.0"; sha256="1m87vgr6hh3g0j1x0725b4x6a28h6ks59v0vl8c4hki131k4rmf5"; depends=[data_table dplyr MASS Matrix optimx qlcMatrix Rdpack]; }; peRiodiCS = derive2 { name="peRiodiCS"; version="0.5.0"; sha256="1366gmn6qfciwcjsfnbl3hfa16ffn11g00fm0kv74ilvm3nnawk3"; depends=[Hmisc rms]; }; peRspective = derive2 { name="peRspective"; version="0.1.0"; sha256="1zz3znzaa80k60jddys5fhxwx4c8lyqymx5fw2zvj654rnk0mmzc"; depends=[crayon dplyr glue httr jsonlite magrittr purrr rlang rlist stringr tibble]; }; peacots = derive2 { name="peacots"; version="1.3"; sha256="128qpz06b0giz80lp9yq9l6pxcjglfr97yickg7z64vzzl2jilmq"; depends=[]; }; @@ -11426,16 +11457,16 @@ in with self; { pear = derive2 { name="pear"; version="1.2"; sha256="1ixmyzm72s18qrfv2m8xzh5503k1q90lhddq4sp46m0q7qyxb192"; depends=[]; }; pearson7 = derive2 { name="pearson7"; version="1.0-2"; sha256="0x8bnlzgmfah8lzdg8skxs7bm8yq0nkrhqi7q43h902j4jl5b8jy"; depends=[]; }; pec = derive2 { name="pec"; version="2019.11.03"; sha256="1h6fk3k9w61a9xqhvkm1zdv75nsl06n78036qvcxkcf0bkfxl360"; depends=[foreach prodlim rms survival timereg]; }; - pedgene = derive2 { name="pedgene"; version="3.2"; sha256="1cl95fw6wdh4k6rg1nlydh09gf96pcgyfd3bxdcaisq0vfn05g0j"; depends=[CompQuadForm kinship2 Matrix survey]; }; + pedgene = derive2 { name="pedgene"; version="3.3"; sha256="0y6kr5ad4fmxljsj0czs9h1dkz63wvqiira9ibgsf0707xb0vh7f"; depends=[CompQuadForm kinship2 Matrix survey]; }; pedigree = derive2 { name="pedigree"; version="1.4"; sha256="1dqfvzcl6f15n4d4anjkd0h8vwsbxjg1lmlj33px8rpp3y8xzdgw"; depends=[HaploSim Matrix reshape]; }; pedigreeTools = derive2 { name="pedigreeTools"; version="0.1"; sha256="0kgbjyw9dlp4s91cyg5w0p2vn2h9pg9ixrhc5pwvkp3v1acd0xfm"; depends=[Matrix]; }; pedigreemm = derive2 { name="pedigreemm"; version="0.3-3"; sha256="1bpkba9nxbaxnivrjarf1p2p9dcz6smf9k2djawis1wq9dhylvsb"; depends=[lme4 Matrix]; }; pedmut = derive2 { name="pedmut"; version="0.1.0"; sha256="0b8qlcl4g8kjix4q1drs1yk7wnilxqslv4p8svyabcg8wb4bnvwa"; depends=[]; }; - pedometrics = derive2 { name="pedometrics"; version="0.6-6"; sha256="1w9wa73wva6z0d56g221l8qmc5igfypwsa2xq4sn4r501bdy8qpq"; depends=[lattice latticeExtra Rcpp]; }; + pedometrics = derive2 { name="pedometrics"; version="0.7.0"; sha256="0rqldc67yrcg16i5q9wrmfmh3lw3qrfdxwdb4mxkjxx18v4fv737"; depends=[lattice latticeExtra Rcpp]; }; pedprobr = derive2 { name="pedprobr"; version="0.1.0"; sha256="1nn8pmxzj1lnfynaws87lbrk2p5y8im4cdm46vw91lbk00z7j3vc"; depends=[pedmut pedtools]; }; - pedquant = derive2 { name="pedquant"; version="0.1.2"; sha256="18shjp241ihy01ksmp2sqrpq5y693njml4wqaayypb961s1850kj"; depends=[curl data_table ggplot2 gridExtra httr jsonlite readr readxl rvest scales stringi TTR webdriver xml2 zoo]; }; - pedtools = derive2 { name="pedtools"; version="0.9.1"; sha256="1qki2yf0dy9yl7b0n8va2knzpjnrai4v5qg6538kqsbpx1i9rxcy"; depends=[kinship2]; }; - pegas = derive2 { name="pegas"; version="0.12"; sha256="0sb8cmz4d238mcb56hv9fa0cagm00k82r7aj4cj4lxa1flxlpy8p"; depends=[adegenet ape]; }; + pedquant = derive2 { name="pedquant"; version="0.1.3"; sha256="11l6h0pvysb02f81rnwsyc8c2xj3p4smgi9dbmsv41ka54v6rss7"; depends=[curl data_table ggplot2 gridExtra httr jsonlite readr readxl rvest scales stringi TTR xml2 zoo]; }; + pedtools = derive2 { name="pedtools"; version="0.9.2"; sha256="1kmckn6d6n5ssrbfzsg46cz0vhvlql38dqjjhlsibwvwhnp23xj8"; depends=[kinship2]; }; + pegas = derive2 { name="pegas"; version="0.13"; sha256="002i7s4g0nhnq0v05gs0yssqiyhpq2f7rw2rhn31hsbgxc86frvy"; depends=[adegenet ape]; }; pems_utils = derive2 { name="pems.utils"; version="0.2.26.4"; sha256="13d5cg2wdz84inby017bra6xzwhkp5qcy1b213r387fq771h2xrx"; depends=[baseline dplyr ggplot2 lattice latticeExtra loa RColorBrewer Rcpp rlang]; }; penDvine = derive2 { name="penDvine"; version="0.2.4"; sha256="0znpvsr7zy2wgy7znha1qiajcrz1z6mypi3f5hpims33z7npa7dl"; depends=[doParallel fda foreach lattice latticeExtra Matrix quadprog TSP]; }; penMSM = derive2 { name="penMSM"; version="0.99"; sha256="1xdcxnagvjdpgnfa5914gb41v5y4lsvh63lbz1d2l8bl9mpff3lm"; depends=[Rcpp]; }; @@ -11444,10 +11475,9 @@ in with self; { penalizedLDA = derive2 { name="penalizedLDA"; version="1.1"; sha256="1bw5wiixmmg1vr3v0d59vh67f0gy2rvr30bi58skvrkb25qcjq6l"; depends=[flsa]; }; penalizedSVM = derive2 { name="penalizedSVM"; version="1.1.2"; sha256="03zw95bc6svbnzak9x72s3b8l9gh581mxn2di1fl89gxlh864amd"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; }; penaltyLearning = derive2 { name="penaltyLearning"; version="2019.5.29"; sha256="0m4smrpsw9pr8vpnx75yxp3q2z8fn25c9f2sxaqv2vjwdnyza5sx"; depends=[data_table geometry ggplot2]; }; - pencopula = derive2 { name="pencopula"; version="0.3.5.1"; sha256="1ivnqfq70gvnzc19brkvdlq0ks5dd954dj46j3pqpg6crvdrzh9r"; depends=[fda lattice latticeExtra quadprog]; }; pencopulaCond = derive2 { name="pencopulaCond"; version="0.2"; sha256="18hjjxnd0l2ms20ddqkghfbd4as5kq2rgwqzpz4y38k6nw76x511"; depends=[doParallel fda foreach igraph lattice latticeExtra pacotest quadprog TSP]; }; pendensity = derive2 { name="pendensity"; version="0.2.13"; sha256="1wcsib7m2161nqqrmgdvrj7lr8zq6njc9xr935hwfh3qbbgkmfjb"; depends=[fda lattice]; }; - pense = derive2 { name="pense"; version="1.2.5"; sha256="05v63xfmriipgziqw87h2y1m2dyvxwq6qd67x0kw5rq37zvyj3ak"; depends=[Matrix Rcpp RcppArmadillo robustbase]; }; + pense = derive2 { name="pense"; version="1.2.9"; sha256="0ls573kx3z09v848fi5pvidc5l2dhmqv9vvyjspzzfiff3z6w09i"; depends=[Matrix Rcpp RcppArmadillo robustbase]; }; pensim = derive2 { name="pensim"; version="1.2.9"; sha256="10nrnxwfs41bhybs7j6xgnx0pq3c802n9k8irngmh8iy4w3wbhrq"; depends=[MASS penalized]; }; peperr = derive2 { name="peperr"; version="1.1-7.1"; sha256="12k9crhsv3p4zrcbyr85cfwp68z3r1w2kb62g7jb7h311c7zykjx"; depends=[snowfall survival]; }; peptider = derive2 { name="peptider"; version="0.2.2"; sha256="109z81x6jcsx2651lclff7ak55zb1i89pyi58rxri40aamx4b1x2"; depends=[discreteRV dplyr plyr]; }; @@ -11456,18 +11486,17 @@ in with self; { perccal = derive2 { name="perccal"; version="1.0"; sha256="1akak068d0g70amj5sbvnqbywzy21l4wz11mhp71b7cp4xmr9n12"; depends=[Rcpp RcppArmadillo RcppEigen]; }; perccalc = derive2 { name="perccalc"; version="1.0.5"; sha256="14557k7khc3l5m0vlam0fvbsb6p78v9gfcnx5ksxcvrab28xj7p3"; depends=[multcomp tibble]; }; perfectphyloR = derive2 { name="perfectphyloR"; version="0.2.0"; sha256="00gvmn66lb9hfli7yc3l5913xpngib1vksg5zjnxqxiwdibjfqx8"; depends=[ape phytools Rcpp RcppArmadillo]; }; - performance = derive2 { name="performance"; version="0.4.3"; sha256="1164585ywbnrcy7an57kifh2gdb6g08z9pxw75ywqdcfyd51i3dz"; depends=[bayestestR insight]; }; + performance = derive2 { name="performance"; version="0.4.4"; sha256="18h9y66cpsb3k6xnaya87vnpv2s3chf4bzsc4ym3n5sxhh41j7la"; depends=[bayestestR insight]; }; performanceEstimation = derive2 { name="performanceEstimation"; version="1.1.0"; sha256="08jx2zl6xh0rp54xa70gb717wbfdzfrx9b47i3b3ly41qaf85vrc"; depends=[dplyr ggplot2 parallelMap tidyr]; }; pergola = derive2 { name="pergola"; version="1.0"; sha256="1650ipp2b455xdkznwm7bnxvimad7nbyr9i1lg2vdh64j1qfh7gl"; depends=[seriation]; }; - periscope = derive2 { name="periscope"; version="0.4.7"; sha256="1kzk8vp7w3ki4z9arhf340hkbh44jzwf5p2lzyy5wx6z92s4lv5d"; depends=[DT ggplot2 logging lubridate openxlsx shiny shinyBS shinydashboard shinydashboardPlus]; }; + periscope = derive2 { name="periscope"; version="0.4.8"; sha256="0nzkvwk8sjq3rbvx2b3g09429pvx80s8h9xnld44kxm5lip0lqyl"; depends=[DT ggplot2 logging lubridate openxlsx shiny shinyBS shinydashboard shinydashboardPlus]; }; perm = derive2 { name="perm"; version="1.0-0.0"; sha256="0075awl66ynv10vypg63fcxk33qzvxddrp8mi4w08ysvimcyxijk"; depends=[]; }; - permDep = derive2 { name="permDep"; version="1.0.2"; sha256="0dv740vnjy99rc6px8w4ngis3w6zc4c67m0bx2lh327sqb7q3zsd"; depends=[BB survival]; }; permGPU = derive2 { name="permGPU"; version="0.14.9"; sha256="10r2qxbvzjxv3520lrn6cwi5akhhwgkhz7yaqxi5vh2f5l0s49wy"; depends=[Biobase foreach RUnit survival]; }; permGS = derive2 { name="permGS"; version="0.2.5"; sha256="0d2kp3c1fmnjjmsvc2qwh6m66yqvy2vrrxgv1fj2i4clsbavfa0y"; depends=[coin survival]; }; permPATH = derive2 { name="permPATH"; version="1.1"; sha256="06h1lqpmkg4ajjh4r837qp094h105n4mpvafnp2nsbv9yyayd4h8"; depends=[R2HTML xtable]; }; permubiome = derive2 { name="permubiome"; version="1.3"; sha256="0x5c9yf9xl14p1dxbhdggw75pnp0pzvm6bdigfpmhkq9qamdyscf"; depends=[dabestr ggplot2 gridExtra Matrix]; }; permuco = derive2 { name="permuco"; version="1.1.0"; sha256="1mp3yp4p1b382c31a3jcmq1n90zvb1lggacb3zdblpmz1yrj4v1c"; depends=[Matrix permute]; }; - permutations = derive2 { name="permutations"; version="1.0-5"; sha256="0891yqrj45fn11762d4an3bri8ihlxf0102z06mbfdy4hf8582h0"; depends=[magic numbers partitions]; }; + permutations = derive2 { name="permutations"; version="1.0-6"; sha256="1bygr2fa2qjka4bbx9i6l1iiy15anz427y3zh8hdq0r21aygmi7v"; depends=[magic numbers partitions]; }; permute = derive2 { name="permute"; version="0.9-5"; sha256="0ra8p5mf2590azrkas8z2ry7mif77xqxd29n4zgyi5vll225726j"; depends=[]; }; permutes = derive2 { name="permutes"; version="1.0"; sha256="1lrhlqwv1y2vgklgwp16jw90vmgifnp4rlxw55hhj8gs97agv5y8"; depends=[ggplot2 lmPerm plyr viridis]; }; perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; }; @@ -11477,15 +11506,14 @@ in with self; { perspectev = derive2 { name="perspectev"; version="1.1"; sha256="175s1nq5z4gfs5qb39lq230g6n0v8fxzs5hr9j2rgx0knpbjfq03"; depends=[ape boot doParallel foreach ggplot2 mapproj sp]; }; perturb = derive2 { name="perturb"; version="2.10"; sha256="07c84x67hzyr70zkmd00f4gxqzcrpizc7w7h2hs22xy6p719a5i2"; depends=[gdata]; }; perturbR = derive2 { name="perturbR"; version="0.1.3"; sha256="1sdk5ls8x66lds4cy40xbl383px4xmrh21cw4bgy83rzbjjzwp2h"; depends=[ggplot2 igraph]; }; - pesel = derive2 { name="pesel"; version="0.7.2"; sha256="08f4nmiyisq6zb55zxy0ipwbp4x2vslcy1a2hkbpvzpns5472cnb"; depends=[]; }; + pesel = derive2 { name="pesel"; version="0.7.3"; sha256="125rgbar1aiw7x3ywfb09s3gh3k0zal0p44h4928d854mn4m986s"; depends=[]; }; petitr = derive2 { name="petitr"; version="1.0"; sha256="0i13zhdrdka0ij0khdzj6ylvvcn4wxvplb8a368i1s64cpgak30c"; depends=[]; }; petrinetR = derive2 { name="petrinetR"; version="0.2.1"; sha256="0h9nsjsj87b6qvvkg81kn0j2c4xkzq89sddp9l6pjh636bdqwf8i"; depends=[DiagrammeR dplyr purrr visNetwork xml2]; }; petro_One = derive2 { name="petro.One"; version="0.2.3"; sha256="1xky85vfk2mpj8xxdqggismzirm3rx2wr51g12zr80i1dx5wak4i"; depends=[cluster data_table dplyr ggplot2 graph magrittr RColorBrewer Rgraphviz rvest RWeka SnowballC tibble tm urltools wordcloud xml2]; }; - pewdata = derive2 { name="pewdata"; version="0.3.0"; sha256="01h4h8rxsg7ykz10qajvq2cdlj3mwj5jf2gzv1mswga8g86dkdhq"; depends=[foreign magrittr purrr rio RSelenium stringr]; }; + pewdata = derive2 { name="pewdata"; version="0.3.1"; sha256="1dn6v41kwrs8dj66063y7l6vryih2q49qcfvmhaiaxzvbpzymiyc"; depends=[foreign magrittr purrr rio RSelenium stringr]; }; pez = derive2 { name="pez"; version="1.2-0"; sha256="0rar132szi9idr99aaz3rs4r62b515pl91q0yxahg30ixnym7fjm"; depends=[ade4 animation ape apTreeshape caper FD Matrix mvtnorm phytools picante quantreg vegan]; }; pfa = derive2 { name="pfa"; version="1.1"; sha256="0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31"; depends=[lars POET quantreg]; }; pgam = derive2 { name="pgam"; version="0.4.15"; sha256="12llflsb32dfvxl3nbyb9bsl9bmd35g5g163hd3axzmg1bgi21ls"; depends=[]; }; - pgbart = derive2 { name="pgbart"; version="0.6.16"; sha256="09mrx375xny47yx6ybmyr66z9p96jjk98z8l1gd0l9s3kffj42n8"; depends=[BayesTree]; }; pgdraw = derive2 { name="pgdraw"; version="1.1"; sha256="1s1b1izpgryrqsjkdh3yvr137054sipj3kwdkzlx2af8xjr53f85"; depends=[Rcpp]; }; pgee_mixed = derive2 { name="pgee.mixed"; version="0.1.0"; sha256="115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg"; depends=[copula mvtnorm Rcpp RcppArmadillo]; }; pgirmess = derive2 { name="pgirmess"; version="1.6.9"; sha256="1i1qn68isaz2lbpqyydjgj9kri09aknza5qjn6m1wa1alyl7f611"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; @@ -11500,8 +11528,8 @@ in with self; { ph2mult = derive2 { name="ph2mult"; version="0.1.1"; sha256="0w3w18fkr9xzv6mpb00cz5id33zgsnl6s8zgjpchzvrhmpjpp437"; depends=[clinfun]; }; phangorn = derive2 { name="phangorn"; version="2.5.5"; sha256="0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; phantom = derive2 { name="phantom"; version="0.1.3"; sha256="0kgw65jziw5s03isq5ywmqijhkbik5i84k30hx5gbi0zzgj8y0h1"; depends=[gplots MASS NMF qusage RColorBrewer Rcpp RcppArmadillo]; }; - phase1PRMD = derive2 { name="phase1PRMD"; version="1.0.1"; sha256="1gg11rvs5zqza66f7r7sw7g3w8nzi3il1883wpwzqhp58hsphjdw"; depends=[arrayhelpers coda dplyr ggplot2 gridExtra kableExtra knitr MASS phase1RMD plyr RColorBrewer reshape2 rjags]; }; - phase1RMD = derive2 { name="phase1RMD"; version="1.0.8"; sha256="1wvlajsqb8y8f30asq1lyk87kmakh2risnky98g5gday765y90qa"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; }; + phase1PRMD = derive2 { name="phase1PRMD"; version="1.0.2"; sha256="0gr73nsp0an0ci6l86h9fw6l791jdw0b1497qi58w25zypggdyac"; depends=[arrayhelpers coda dplyr ggplot2 gridExtra kableExtra knitr MASS plyr RColorBrewer reshape2 rjags]; }; + phase1RMD = derive2 { name="phase1RMD"; version="1.0.9"; sha256="0dnyqa6jias2jqjqjpiq32jnd21ghb2shw45vdq8b5xyb8rxclwj"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; }; phaseR = derive2 { name="phaseR"; version="2.1.3"; sha256="1xqh6k8zl0jc2srklb8vg57f88kssm80b286asg2cawanj06qs2k"; depends=[deSolve]; }; phateR = derive2 { name="phateR"; version="1.0.0"; sha256="1xfbzqhly569i4ic2gv4vn4sqnyqzhgqil17z1133sx78r4yj83a"; depends=[ggplot2 Matrix reticulate]; }; phd = derive2 { name="phd"; version="0.1"; sha256="1scwan3pkhdl0nyhpjrkcal1f58x0jkdkhixdcxppr1363r1v22a"; depends=[glmnet]; }; @@ -11512,14 +11540,13 @@ in with self; { phenex = derive2 { name="phenex"; version="1.4-5"; sha256="00lsymflbmlxzxz8rxcpc94pc9zmhybial9f2xkz98h6h45zgrjl"; depends=[DEoptim foreach]; }; phenmod = derive2 { name="phenmod"; version="1.2-3"; sha256="0dxwx8c7zka29fq7svrvn8bghj8jh8grbrgsw4pvavx2439cldak"; depends=[gstat lattice pheno RColorBrewer]; }; pheno = derive2 { name="pheno"; version="1.6"; sha256="0xdya1g1ap7h12c6zn3apbkxr725rjhcp4gbdchkvcnwz4y9vw8c"; depends=[nlme quantreg SparseM]; }; - pheno2geno = derive2 { name="pheno2geno"; version="1.4.0"; sha256="0fy8z6x1y0sakp07jb6zs0w0f86pbbllicj4qylxzfd5rpn1rqr0"; depends=[mixtools qtl VGAM]; }; phenoCDM = derive2 { name="phenoCDM"; version="0.1.3"; sha256="1cyqwc36zwa2a4ljy0xnqz0hhw0r98qk2an5y002lrchkqydplwp"; depends=[rjags]; }; phenocamapi = derive2 { name="phenocamapi"; version="0.1.5"; sha256="1kvb7lsixhh2sqdd5r9si0wbnrzfg3fbs29pb2nvl3086hnshl9i"; depends=[data_table RCurl rjson]; }; phenocamr = derive2 { name="phenocamr"; version="1.1.3"; sha256="1wfrzs0sdhp7ivj9n6c2i8dr35gl6dp2rai69ylh5xxlk643a2ck"; depends=[changepoint daymetr httr jsonlite memoise shiny zoo]; }; phenofit = derive2 { name="phenofit"; version="0.2.5-2"; sha256="1mjwg56v6b0mak7hrm821lrckq0j8nzc4w2lyqxsancil5xlqnqd"; depends=[data_table dplyr foreach ggplot2 gridExtra iterators jsonlite lubridate magrittr numDeriv optimx plyr purrr Rcpp RcppArmadillo reshape2 shiny spam stringr tibble tidyr ucminf zoo]; }; phenology = derive2 { name="phenology"; version="7.3"; sha256="0hklk5k0i6vv733dm3npphg0zrhlb14ps6j6wwvsx50sqr3xl9jg"; depends=[HelpersMG lmf numDeriv optimx]; }; phenomap = derive2 { name="phenomap"; version="1.2.1"; sha256="0kpngxqrbahild5nblfvgx2kna43hqqldx5q3b127dnqwzbhfvbb"; depends=[doParallel dplyr phenex plyr raster rgdal stringr]; }; - phenopix = derive2 { name="phenopix"; version="2.3.1"; sha256="1yy163nh2b74m0v7f2gkgxaplvw4whs2h30bkw4chl0zyrcrci86"; depends=[bcp doParallel foreach gtools iterators jpeg plyr raster SDMTools sp stringr strucchange zoo]; }; + phenopix = derive2 { name="phenopix"; version="2.4"; sha256="0l6g4zc2wlmdizgbi3c8580ahyx59izpdas9sjbnas719hn59wvc"; depends=[bcp doParallel foreach gtools iterators jpeg plyr raster sp stringr strucchange zoo]; }; phiDelta = derive2 { name="phiDelta"; version="1.0.1"; sha256="0g1g5516p8i1gfpvsy75rdirib8sx1ki2mbf1cvgsnzh70h72gbv"; depends=[]; }; phia = derive2 { name="phia"; version="0.2-1"; sha256="0rv2akl5a488vax4sd9wnx765mch4vvcmg3iyxyljzl5kpqh5r00"; depends=[car Matrix]; }; philentropy = derive2 { name="philentropy"; version="0.4.0"; sha256="09vi6mfcig397226kq2fgymwg5ng8iysi6b2f616masscgshplxz"; depends=[dplyr KernSmooth Rcpp]; }; @@ -11538,9 +11565,7 @@ in with self; { photobiologySun = derive2 { name="photobiologySun"; version="0.4.1"; sha256="15wp8q29m5c4qplind9098ikxmm1r60lw8cm0pa48lmh33638ia3"; depends=[photobiology]; }; photobiologyWavebands = derive2 { name="photobiologyWavebands"; version="0.4.3"; sha256="04nc3yhd97k2pb1jv2bgda8mii4y4ph1884wagw8y3lc0g4dkicv"; depends=[photobiology]; }; photosynthesis = derive2 { name="photosynthesis"; version="1.0.0"; sha256="089b42s4277j6pmxa3jsg0bcrilqanp7dblnz6hlmgprqcbmlhwb"; depends=[crayon dplyr furrr future glue gunit magrittr purrr rlang stringr tealeaves tidyr tidyselect units]; }; - phrasemachine = derive2 { name="phrasemachine"; version="1.1.2"; sha256="1145c8ymarhbza8253rw4ybnq0k5pcckqxpdcr8s2y23pj182r1p"; depends=[NLP openNLP stringr]; }; phreeqc = derive2 { name="phreeqc"; version="3.6.0"; sha256="17dv4c94y7z5yaqx1g8llbmwpg15pkkixkhmi5knyyvi2fd23vkl"; depends=[]; }; - phtt = derive2 { name="phtt"; version="3.1.2"; sha256="1fvvx5jilq5dlgh3qlfsjxr8jizy4k34a1g3lknfkmvn713ycp7v"; depends=[pspline]; }; phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; }; phuse = derive2 { name="phuse"; version="0.2.2"; sha256="0aihiz0gkvs7bq9f9fmfxsv7wk5yifcnmgnjl3y9qf2dzl5787bb"; depends=[git2r httr jsonlite RCurl rlist SASxport shiny stringr yaml]; }; phybreak = derive2 { name="phybreak"; version="0.2.0"; sha256="0vapc0w308wv1cd72p2xbj3q7jfnxwp08g5g8855a38pcn3njbfg"; depends=[ape phangorn Rcpp stringr]; }; @@ -11548,7 +11573,7 @@ in with self; { phyext2 = derive2 { name="phyext2"; version="0.0.4"; sha256="0j871kgqm9fll0vdgh071z77ib51y8pxxm0ssjszljvvpx1mb8rb"; depends=[ape phylobase]; }; phylin = derive2 { name="phylin"; version="2.0.2"; sha256="0v6fyk2prja448vdi7ipwzws28fjfi188pfncjf9mhn8jrgpfxl6"; depends=[]; }; phyloTop = derive2 { name="phyloTop"; version="2.1.1"; sha256="1n44kr3a9yg8yvy3m493zi04x6aiqm424fp2ls9yzyx1cga2h9nk"; depends=[ape igraph NHPoisson phylobase]; }; - phylobase = derive2 { name="phylobase"; version="0.8.6"; sha256="1n9g69llrh8xfmrnxh78rr09cxy5qbc99dr3amg121pl1qhpn4g7"; depends=[ade4 ape Rcpp rncl RNeXML]; }; + phylobase = derive2 { name="phylobase"; version="0.8.10"; sha256="0jzr1gdvmi4l640hwwzh9bxqmpja69bn3ygnaqx37awvyh7khi2s"; depends=[ade4 ape Rcpp rncl RNeXML]; }; phylocanvas = derive2 { name="phylocanvas"; version="0.1.3"; sha256="1l5br500lwwf7vp8wph5ykpkpqd15lypvhzy0c1cc8g8c6f7pckn"; depends=[ape htmlwidgets phylobase]; }; phyloclim = derive2 { name="phyloclim"; version="0.9.5"; sha256="107kilh0gwr84ig54g92zyk7zv553pky2bzpjqgf9fjwbm6fvmrs"; depends=[ape raster sp]; }; phylocomr = derive2 { name="phylocomr"; version="0.3.2"; sha256="1qdhf6a7cqp12i4macy5wcbk6mf01fqbm4rc11yl63qr72zwrbhy"; depends=[sys tibble]; }; @@ -11558,9 +11583,8 @@ in with self; { phylolm = derive2 { name="phylolm"; version="2.6"; sha256="0vah8ibicldi57wab4sk1kx7gdq6h34bm6swmxzhq7kikxfwmmyj"; depends=[ape future_apply]; }; phylometrics = derive2 { name="phylometrics"; version="0.0.1"; sha256="1pmr6l3wmaf91wdlsc5m63l07fibngnly2qzkma0rdi463ii03il"; depends=[mvtnorm]; }; phylopath = derive2 { name="phylopath"; version="1.1.2"; sha256="15fs845ay7nbhaxwapc2b33f134nqj1m365l44iyikdm4cacmdx0"; depends=[ape ggm ggplot2 ggraph igraph MuMIn pbapply phylolm purrr tibble]; }; - phyloseqGraphTest = derive2 { name="phyloseqGraphTest"; version="0.0.2"; sha256="1xgv2kf7j3ia5vk10r7w9588rfv7asdaf8f3yxwp5q7aqn3krm6q"; depends=[ggnetwork ggplot2 igraph intergraph phyloseq]; }; - phylosim = derive2 { name="phylosim"; version="3.0.5"; sha256="07adqgkxng0jj51nhwlsxxnd0bdxrk54lvj1fs53yxy236q6xwkf"; depends=[ape compoisson ggplot2 R_methodsS3 R_oo]; }; - phylotaR = derive2 { name="phylotaR"; version="1.0.0"; sha256="0plxc3l9fxxj9mfnhnpp5wrxyvxm292fxrwx2g8xysasmjb301v9"; depends=[ggplot2 igraph R_utils rentrez sys treeman treemapify XML]; }; + phyloseqGraphTest = derive2 { name="phyloseqGraphTest"; version="0.1.0"; sha256="0y1hxj68dcic4i7ihnw9hgf28qp6s6kpq4c08dy7gv19gq7sllgd"; depends=[ggnetwork ggplot2 igraph intergraph phyloseq]; }; + phylosignal = derive2 { name="phylosignal"; version="1.3"; sha256="1h73wwczwak5v89mybq16lmmfr0fxfv5mx347ffipy6q9vgvwqx5"; depends=[adephylo ape boot DBI igraph phylobase Rcpp RcppArmadillo]; }; phylotate = derive2 { name="phylotate"; version="1.3"; sha256="092kvn32j06vm8ilwjkgidcz11r3qhsmi0cb0g0nnykw0a0vii4p"; depends=[]; }; phylotools = derive2 { name="phylotools"; version="0.2.2"; sha256="1dhk1ncp5zi4zl1xfnjz64v983dm7bq7iimfjin80j0bdcpps44w"; depends=[ape]; }; phyr = derive2 { name="phyr"; version="1.0.2"; sha256="1qk4mbchi5dcz6vsmwb93gj5ihp2ygvm1ya63mkw11vkyy2nv67c"; depends=[ape dplyr gridExtra latticeExtra lme4 Matrix mvtnorm nloptr Rcpp RcppArmadillo]; }; @@ -11568,15 +11592,15 @@ in with self; { physiology = derive2 { name="physiology"; version="1.2.1"; sha256="1z7xymwgj7bqn0yvcz3q8pvwhpr5vx5qd0x8sayal1vgpqc0nccb"; depends=[Rcpp]; }; phytools = derive2 { name="phytools"; version="0.6-99"; sha256="03rrcx2r8sbf6510xdd0259p02apy2z84ifk7f076pvwlz5k5x9f"; depends=[animation ape clusterGeneration coda combinat expm gtools maps MASS mnormt nlme numDeriv phangorn plotrix scatterplot3d]; }; phytotools = derive2 { name="phytotools"; version="1.0"; sha256="049znviv2vvzv23biy1l28axm7bc7biwmq4bnn0cnjqgkk48ysz3"; depends=[FME insol]; }; - picante = derive2 { name="picante"; version="1.8"; sha256="1bcq2j7fs89c2jib68qq6la67rxyg9raryf162mwvjakpf6k19l1"; depends=[ape nlme vegan]; }; + picante = derive2 { name="picante"; version="1.8.1"; sha256="1b16zm8zjjsl181b8krkdcrbcw347kf772c4w7y5332qmfi7jhz0"; depends=[ape nlme vegan]; }; picasso = derive2 { name="picasso"; version="1.3.1"; sha256="1z7zm88wjp7fia7054l7i55f152iddrjj9wbcpcskhc8s6kfg53c"; depends=[MASS Matrix]; }; pid = derive2 { name="pid"; version="0.50"; sha256="05s3xqf95d4avh7gkr49jsm8jzacbv694c3wgppkkc40zip6vkc7"; depends=[DoE_base FrF2 FrF2_catlg128 ggplot2 png]; }; piecepackr = derive2 { name="piecepackr"; version="1.2.1"; sha256="1mh3b862pyxl9zkxmvcflnn4b0nx27s8fj3srs5ph2gwhh7l3zcy"; depends=[grImport2 jpeg png purrr R6 stringr tibble]; }; piecewiseSEM = derive2 { name="piecewiseSEM"; version="2.1.0"; sha256="1dpl3kyph0ry9g9321cknznjdizh03klg0s6hx56g6h8ygb0ar6h"; depends=[car DiagrammeR emmeans igraph lme4 MASS nlme]; }; pifpaf = derive2 { name="pifpaf"; version="1.0.1"; sha256="0wj1fbhd871fnw7fjlbh0gdjz848mbwl1bzjp3cgmh9s7jnd2kci"; depends=[ggplot2 gridExtra MASS matrixcalc numDeriv sfsmisc]; }; - piggyback = derive2 { name="piggyback"; version="0.0.10"; sha256="08d7jxw7mvfyhjbr8zy95p952j2p94ii6zq38b8xw96g6k1380bz"; depends=[clisymbols crayon fs gh git2r httr jsonlite lubridate magrittr memoise usethis]; }; + piggyback = derive2 { name="piggyback"; version="0.0.11"; sha256="17cmkzp4g5gcapab3g5jxpabsmw4s3zsizqd99bh36xyw76v1jds"; depends=[clisymbols crayon fs gh git2r httr jsonlite lubridate magrittr memoise usethis]; }; pillar = derive2 { name="pillar"; version="1.4.3"; sha256="02sn7zw80wq33jgxk2i6m5jb83sk7y72dfhgyy0apfinv05w92ss"; depends=[cli crayon fansi rlang utf8 vctrs]; }; - pim = derive2 { name="pim"; version="2.0.1"; sha256="1m804clxc8m4nyzi4hhfy118527lgf2sb7589qd61fb83yh6hi8p"; depends=[BB nleqslv]; }; + pim = derive2 { name="pim"; version="2.0.2"; sha256="0kwlm6n23ccs0jz4plsqprg6inj3qv74zhvg9gpxyj3ksvdxp58i"; depends=[BB nleqslv]; }; pimeta = derive2 { name="pimeta"; version="1.1.3"; sha256="1mx0m438db4n041bns6sm8sr8vrj6w8b2kvpmrkkp0bly2vpv40q"; depends=[ggplot2 Rcpp RcppEigen scales]; }; pinbasic = derive2 { name="pinbasic"; version="1.2.2"; sha256="0mcw68wrixz2jf62nfifdgg8bnp4h1p3byivz28wi61blj8iaa75"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; pinfsc50 = derive2 { name="pinfsc50"; version="1.1.0"; sha256="1fja8xdqwsm4g223wmb2yg5fqmsg94hchzjd4qrqah1zb8vbdfdn"; depends=[]; }; @@ -11586,7 +11610,7 @@ in with self; { pinnacle_data = derive2 { name="pinnacle.data"; version="0.1.4"; sha256="1sl36i2857b3xwx7iwgy8mkgjvz7nfa74ch1n8kcxbj59ib7mp8p"; depends=[tibble]; }; pinochet = derive2 { name="pinochet"; version="0.1.0"; sha256="0qy18mlw34cv9p7b3qb5bidxyq44k0hzj91hm5vp6wkjhik4knvi"; depends=[]; }; pinp = derive2 { name="pinp"; version="0.0.9"; sha256="1hdj0mqwz0hwl6jsh5zknbgg10bj49giqnr4y3lavfbk8d7qmmvs"; depends=[knitr rmarkdown]; }; - pins = derive2 { name="pins"; version="0.3.1"; sha256="187n23r099fgv6d0xsb4hjah74nni14q380lldv5y17swv0vl89r"; depends=[base64enc crayon httr jsonlite magrittr mime openssl rappdirs withr yaml zip]; }; + pins = derive2 { name="pins"; version="0.3.2"; sha256="0bjax4zwjx0csxqrn5v80mqx8aw4apsrqggxncvwprd98wlyakjr"; depends=[base64enc crayon httr jsonlite magrittr mime openssl rappdirs withr yaml zip]; }; pinyin = derive2 { name="pinyin"; version="1.1.6"; sha256="0rw9qd5hbcmpi30vdqs31ijy37d8jlpqv0xif2nndb8cwj8x5bw2"; depends=[data_table splitstackshape]; }; pipe_design = derive2 { name="pipe.design"; version="0.5.1"; sha256="0r0szkdzifxmnnbr6675w8ij4zwqgxj3gwahc7a74mxr51f7qh8j"; depends=[ggplot2 gtools xtable]; }; pipeGS = derive2 { name="pipeGS"; version="0.4"; sha256="0ki4i70r5f195b4jfv3hxlxz3zj57mhy2yf4984bwr11impilz5w"; depends=[]; }; @@ -11599,13 +11623,13 @@ in with self; { piton = derive2 { name="piton"; version="0.1.1"; sha256="1265y4lv2m5nwrh25sahjkxwmivpxgh9shrdidlmaman7zs6cclr"; depends=[Rcpp]; }; pivmet = derive2 { name="pivmet"; version="0.2.0"; sha256="0xcm0pb5qn2vikhnf7fnp6942syq0xax7fgwmspixa6la5bdkksg"; depends=[bayesmix cluster corpcor MASS mclust mvtnorm RcmdrMisc rjags rstan runjags]; }; pivotaltrackR = derive2 { name="pivotaltrackR"; version="0.1.0"; sha256="024srncm288mn3bz6hv7ljzkchmnljk4yc2d4z7i05vsn7dzd2c6"; depends=[curl httr]; }; - pivottabler = derive2 { name="pivottabler"; version="1.2.3"; sha256="08aapjisah7q0lyw70cfiqkyic633z8cfiq760nnngh88cp1hkc7"; depends=[data_table dplyr htmltools htmlwidgets jsonlite R6]; }; + pivottabler = derive2 { name="pivottabler"; version="1.3.0"; sha256="1bxjrm7760mn1rp983rm04am3l4k4d7sz1g9l3md9zfyqx27yylx"; depends=[data_table dplyr htmltools htmlwidgets jsonlite R6]; }; pixels = derive2 { name="pixels"; version="0.1.0"; sha256="0lna0z2shs49kh48ipjnyigaa22wb9gm4mq970ldhh9msb7wcv55"; depends=[htmlwidgets miniUI shiny]; }; pixiedust = derive2 { name="pixiedust"; version="0.8.6"; sha256="1dajiblpm51szndz026lmwh6swx8f9f03s6md26d84awcx0q1dpc"; depends=[broom checkmate dplyr htmltools knitr labelVector magrittr scales tidyr]; }; pixmap = derive2 { name="pixmap"; version="0.4-11"; sha256="04klxp6jndw1bp6z40v20fbmdmdpfca2g0czmmmgbkark9s1183g"; depends=[]; }; pkgKitten = derive2 { name="pkgKitten"; version="0.1.5"; sha256="0nnib0gv9g22b9p01xigsgj04jv29fv7f444invfphfh9cc866m4"; depends=[]; }; pkgbuild = derive2 { name="pkgbuild"; version="1.0.6"; sha256="0xnlz6ivhkbmncg9hfw5p69lm4rjy3wn5lyxmygxyf4rrfnnqwxx"; depends=[callr cli crayon desc prettyunits R6 rprojroot withr]; }; - pkgcache = derive2 { name="pkgcache"; version="1.0.5"; sha256="0d0w3gqw3429dwmfc9804f9pl71l14phh03ppk2q5q1kyp49xw92"; depends=[assertthat cli cliapp crayon curl digest filelock glue prettyunits R6 rappdirs rematch2 rlang tibble uuid withr]; }; + pkgcache = derive2 { name="pkgcache"; version="1.0.6"; sha256="1wxxrcrckgrbsqrk2l4xrrkmya85pzjij1nc8cqcym8q0sgy7vph"; depends=[assertthat callr cli curl digest filelock glue prettyunits processx R6 rappdirs rlang tibble uuid]; }; pkgcond = derive2 { name="pkgcond"; version="0.1.0"; sha256="0pxj798042g23cf19r67nbgdyhpd868n2pkqjvjgrgr8ivwnkf1h"; depends=[]; }; pkgconfig = derive2 { name="pkgconfig"; version="2.0.3"; sha256="0l1qph8zyi2sic3k2qcd7vlfl7rzfh1q7z7zvjkl5f7y1x2fy3rk"; depends=[]; }; pkgdown = derive2 { name="pkgdown"; version="1.4.1"; sha256="1y0mnsiq05snzschh2y5a0y1wrwh79c4jclsljjyflibbffhxxcf"; depends=[callr cli crayon desc digest evaluate fansi fs highlight httr magrittr MASS memoise openssl processx purrr rematch2 rlang rmarkdown rstudioapi tibble whisker withr xml2 yaml]; }; @@ -11619,7 +11643,7 @@ in with self; { pkmon = derive2 { name="pkmon"; version="1.0"; sha256="0j2v4zlf7vgy5gld29xiii15m9i85cpiwc25rmzjm02cz2p32c72"; depends=[]; }; pkr = derive2 { name="pkr"; version="0.1.2"; sha256="0m045dlcq3rls1w0smy4jvk3c57ckpqdv8xnz261k1gnnyjmz1k2"; depends=[binr foreign forestplot rtf]; }; pks = derive2 { name="pks"; version="0.4-1"; sha256="1lwm65s2b9y6vr1yr683n535yz8hbzc6j289a6yp45v2yai72m07"; depends=[sets]; }; - pksensi = derive2 { name="pksensi"; version="1.1.4"; sha256="0bsl7w96z6hsljdsg9g9xng1sspq2h3ik064g238firxvdyclb46"; depends=[data_table deSolve dplyr getPass ggplot2 magrittr reshape]; }; + pksensi = derive2 { name="pksensi"; version="1.1.5"; sha256="108qm4y1ss1pd6nhckwmg8b45hc3pg0xn5ch8q2xzi1h9imm7hz3"; depends=[data_table deSolve dplyr getPass ggplot2 magrittr reshape]; }; plRasch = derive2 { name="plRasch"; version="1.0"; sha256="1rnpvxw6pzl5f6zp4xl2wfndgvqz5l3kiv9sh4cpvhga0gl8zjaw"; depends=[survival]; }; pla = derive2 { name="pla"; version="0.2"; sha256="1qb71zjcxvs3zbfy0sryyxizwix0nw530zsfw661a8vm8sk054kw"; depends=[]; }; plac = derive2 { name="plac"; version="0.1.1"; sha256="08kqnjzbfygnbqvqg5wyw148kfhjqxy46y4vaiq9zzwzj58w8vzn"; depends=[Rcpp RcppEigen survival]; }; @@ -11628,7 +11652,7 @@ in with self; { plan = derive2 { name="plan"; version="0.4-3"; sha256="0j3mvcy97r7adcs7q6z0w9ng74jcfwii1xp8kcl2cwbzs2fd425r"; depends=[]; }; planar = derive2 { name="planar"; version="1.6"; sha256="0x5xdb2afpc1w8s217hy765mz938kg5b5j7vzqzhlsh2dzdjccpj"; depends=[cubature dielectric ggplot2 plyr Rcpp RcppArmadillo reshape2 statmod]; }; planets = derive2 { name="planets"; version="0.1.0"; sha256="01zh7lgaykr9p186yy0vksn2pmc69b3xxh78w7z6wclvqjb7zh1p"; depends=[]; }; - planor = derive2 { name="planor"; version="1.5-1"; sha256="06xkn12v7ld5fxqjvpmx01jb0a87hnzs8d2clia67sk2h33nlnka"; depends=[bit64 conf_design Rcpp RcppArmadillo]; }; + planor = derive2 { name="planor"; version="1.5-3"; sha256="0klnl8c5h1db8dl9jn159f4ypa8sga0yqdhlh1x8gdkbx7amzrzj"; depends=[bit64 conf_design Rcpp RcppArmadillo]; }; plantecophys = derive2 { name="plantecophys"; version="1.4-4"; sha256="005js9r7xg4jf2aqgsqddkkxhcdnhsiyzc1cqa7j59r4g5xbmh1j"; depends=[]; }; plaqr = derive2 { name="plaqr"; version="2.0"; sha256="15pdb57123m3cahvcsyrrvxjwxvs2f389yxip91gjxn68jf6cx1l"; depends=[quantreg]; }; plater = derive2 { name="plater"; version="1.0.1"; sha256="0v5b9r6iha18qvrjpbr1p8fy06nf31x63ch5cnb4axyqa0x5skpp"; depends=[dplyr]; }; @@ -11640,9 +11664,10 @@ in with self; { plfMA = derive2 { name="plfMA"; version="1.0.4"; sha256="0q6wiiknmgw812kcf9qq309zlizyry7ldn6m08lkw6xq6i4f4s85"; depends=[cairoDevice gWidgets gWidgetsRGtk2 limma RGtk2]; }; plfm = derive2 { name="plfm"; version="2.2.2"; sha256="1jgf3jrkdpsf77i4lf68s6sxax95c9is4nryhnzanq9i5f23j24v"; depends=[abind sfsmisc]; }; plgp = derive2 { name="plgp"; version="1.1-7"; sha256="02g6saabrsd8pra0szbwcbilf6w5ywg2gxqb5zdvbxds2vw36hn0"; depends=[mvtnorm tgp]; }; + pliable = derive2 { name="pliable"; version="1.1.1"; sha256="0kgs7sjzxbb3mr16ddhnamz689wny00qf81b2kwria7vy47ddpri"; depends=[class glmnet]; }; plink = derive2 { name="plink"; version="1.5-1"; sha256="0rn2i9i8af9aq0xgxhpcdchs2952lq2d2sg8x3js0zi3vcml76k0"; depends=[lattice MASS statmod]; }; plinkQC = derive2 { name="plinkQC"; version="0.3.0"; sha256="1s458cg4y1zisjk3var3fnm1q54hfbl228i9qdxgzkkrhzc9mghw"; depends=[cowplot data_table dplyr ggforce ggplot2 ggrepel igraph optparse R_utils sys UpSetR]; }; - plm = derive2 { name="plm"; version="2.2-0"; sha256="0sn8a3f5xaa1c98br454c6h5jfba7s3jscl61km1gm47qcr8a0vz"; depends=[bdsmatrix Formula lattice lmtest MASS maxLik nlme Rdpack sandwich zoo]; }; + plm = derive2 { name="plm"; version="2.2-3"; sha256="10bwd5xpim12038bxs8bmlaf33smlqy5f0cn7p3j6ipfygdwryld"; depends=[bdsmatrix Formula lattice lmtest MASS maxLik nlme Rdpack sandwich zoo]; }; plmm = derive2 { name="plmm"; version="0.1-1"; sha256="1dfxd1mqqjy2mf7qc6mh4wx5ya9q8fkqgrf01apisb66xxx5zya7"; depends=[Formula nlme sm]; }; pln = derive2 { name="pln"; version="0.2-1"; sha256="09zg7zwmmqpjr1j59lqsjf4blrkya9wfwddgzfm9rr5jxrzvqcv8"; depends=[]; }; plogr = derive2 { name="plogr"; version="0.2.0"; sha256="0a8dhzlna79ggyhfr0nncgh15a9n6r0dsz664pz0ah323wpblqqf"; depends=[]; }; @@ -11651,16 +11676,16 @@ in with self; { plot3Drgl = derive2 { name="plot3Drgl"; version="1.0.1"; sha256="12p4qc9vmhr86ssx6xnz3cmx84q5jgd28bw9dp4wjrn04n6l4va6"; depends=[plot3D rgl]; }; plot3logit = derive2 { name="plot3logit"; version="1.0.2"; sha256="0pgqlq8rpkrv277d1mfy2z22mkykc5zmhvkg07wsz3hdxr0ifx80"; depends=[ellipse ggplot2 ggtern magrittr reshape2 Ternary]; }; plotGMM = derive2 { name="plotGMM"; version="0.2.1"; sha256="1gp99gvb886kcwjk9yvfd7s6mgy3jf3x0zhpaj9zp0fky12ivz7b"; depends=[amerika ggplot2 wesanderson]; }; - plotKML = derive2 { name="plotKML"; version="0.6-0"; sha256="18c2lwdlxbzlfhlf0bip825v2mfrnqd9gg30l967zv112j7x0hrf"; depends=[aqp classInt colorRamps colorspace dismo gstat pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sp spacetime stringr XML zoo]; }; + plotKML = derive2 { name="plotKML"; version="0.6-1"; sha256="1k5bfajgzcj912ja8s3ashsvfqz0sx10746x4ggyknyp17qrlbzw"; depends=[aqp classInt colorRamps colorspace dismo gstat pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sp spacetime stringr XML zoo]; }; plotMCMC = derive2 { name="plotMCMC"; version="2.0-0"; sha256="0i4kcx6cpqjd6i16w3i8s34siw44qigca2jbk98b9ligbi65qnqb"; depends=[coda gplots lattice]; }; plotMElm = derive2 { name="plotMElm"; version="0.1.5"; sha256="0wwqzrpkmq9gzazdzlk62qig6vz43niada6fxh1wcsjqjwkcccgp"; depends=[ggplot2 interactionTest]; }; plotROC = derive2 { name="plotROC"; version="2.2.1"; sha256="0bk8j2lp80zcz4kkig1y5a1ig8vbjh7b4inzc46bn07ns1rdjgzg"; depends=[ggplot2 gridSVG plyr rlang shiny]; }; plotSEMM = derive2 { name="plotSEMM"; version="2.4"; sha256="0fircrayhz92zvkigkyb1zpn07bvssqs1ip15p926zj3rl77fqgy"; depends=[MplusAutomation plotrix plyr Rcpp shiny]; }; - plotdap = derive2 { name="plotdap"; version="0.0.5"; sha256="0c0ixynfn7a0n9h78vngsy6rqsypji6ybb4iwbrm14a42q0krhy3"; depends=[cmocean dplyr gganimate ggplot2 lazyeval lubridate magrittr maps raster rerddap rgeos scales sf tidyr viridis]; }; + plotdap = derive2 { name="plotdap"; version="0.0.6"; sha256="0s8i45rqmk96cr7i3xca4900vfcl7j3vd5iiij18gfaxmcn02vjy"; depends=[cmocean dplyr gganimate ggnewscale ggplot2 lazyeval lubridate magrittr maps raster rerddap rgeos scales sf tidyr viridis]; }; plotfunctions = derive2 { name="plotfunctions"; version="1.3"; sha256="0cnmwkfjg45187j490sf01gxijhajrpi6j13hfckli2ysn6xrgz3"; depends=[]; }; - plothelper = derive2 { name="plothelper"; version="0.1.6"; sha256="00bwv2ih967sg81pr8ahyc80j24i1dvcay416andg12674k6gj2w"; depends=[ggfittext ggplot2 gridExtra magick plyr scales]; }; + plothelper = derive2 { name="plothelper"; version="0.1.8"; sha256="0g8dnhr1v0k6m1ws35f3mj99fc32i51jxryg1iy5p852g500qqkr"; depends=[farver ggfittext ggplot2 gridExtra magick plyr scales]; }; plotluck = derive2 { name="plotluck"; version="1.1.1"; sha256="16wqj4xfa8b7kal6v8mp2zlhwf9l3y6y5n44qbpvy652gzb2rw2z"; depends=[ggplot2 hexbin Hmisc plyr quantreg RColorBrewer scales]; }; - plotly = derive2 { name="plotly"; version="4.9.1"; sha256="0gadam4qw81q9gpjp7sqrpd7ikmcdsc78d8vjn39g0xzs5j8r845"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 hexbin htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr viridisLite]; }; + plotly = derive2 { name="plotly"; version="4.9.2"; sha256="19zw3qnhfgqdxlvma8xyikir46aiqhfcwxf072z9xgq0hknpblm5"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 hexbin htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr viridisLite]; }; plotlyGeoAssets = derive2 { name="plotlyGeoAssets"; version="0.0.2"; sha256="1c6i4dz5qmym1pcddgffcqgb76jz84252xldprg2caylrqvzv6b7"; depends=[]; }; plotmo = derive2 { name="plotmo"; version="3.5.6"; sha256="15555b7y62sc0z3r41gb56fmc6rmj1icnanyibx22v8kjz48vw3q"; depends=[Formula plotrix TeachingDemos]; }; plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; }; @@ -11673,7 +11698,7 @@ in with self; { plsRbeta = derive2 { name="plsRbeta"; version="0.2.5"; sha256="1p6vj9sw3hm6nax3vahmr6z58bgc8wl787949dszckn03pxhgvpb"; depends=[betareg boot Formula MASS mvtnorm plsRglm]; }; plsRcox = derive2 { name="plsRcox"; version="1.7.4"; sha256="1cpbhz85c8zpxcwi7ads981dynf83r5ka2zqy6i2swbi83jb5p4x"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; }; plsRglm = derive2 { name="plsRglm"; version="1.2.5"; sha256="004x934c34rgggwb25pcfm3vlj6gc1nfnigjxnxycxjqlx8g567b"; depends=[bipartite boot car MASS mvtnorm]; }; - plsVarSel = derive2 { name="plsVarSel"; version="0.9.4"; sha256="19xz7ds4jx5ql999mwn9zs983rlshf14y4nlah8cfy9gpi0vl1g1"; depends=[bdsmatrix genalg MASS mvtnorm pls progress]; }; + plsVarSel = derive2 { name="plsVarSel"; version="0.9.5"; sha256="1v49sf229v899v8j7ipd0j01cn2gihv5iw9qzx74kpq6ilk56nbv"; depends=[bdsmatrix genalg MASS MSQC mvtnorm pls praznik progress]; }; plsdepot = derive2 { name="plsdepot"; version="0.1.17"; sha256="1i00wxr451xpfy6dnvcm11aqf9106jsh5hj7gpds22ysgm4iq5w4"; depends=[]; }; plsdof = derive2 { name="plsdof"; version="0.2-9"; sha256="1g41nbycgzjwrackbdf08q1phqpyy6zihm5ak2728683vd88fxzv"; depends=[MASS]; }; plsgenomics = derive2 { name="plsgenomics"; version="1.5-2"; sha256="1pvb50nv6jc99bm2hsxpzazg26y49yi24wwwim5xcjj6j1szbip4"; depends=[boot fields MASS plyr reshape2 RhpcBLASctl]; }; @@ -11688,14 +11713,14 @@ in with self; { plus = derive2 { name="plus"; version="1.0"; sha256="1l7lvnq7vahj8m7knmr4q3wj00ar7iq89j45a2dqn2bh0qyj68ls"; depends=[]; }; pluscode = derive2 { name="pluscode"; version="0.1.0"; sha256="1j9yr5j6mb346a5dn7v9bsppgnxdj1ryimlla4a08rv7bjyq5i6q"; depends=[httr jsonlite]; }; plusser = derive2 { name="plusser"; version="0.4-0"; sha256="1g100dh8cvn9q09j0jbkw4xmwjdp1lm4651369975fm99nrlp1j9"; depends=[lubridate plyr RCurl RJSONIO]; }; - plyr = derive2 { name="plyr"; version="1.8.5"; sha256="0x4mbb3rgv1ayxqidw0p9i10khbg51fz5r62vw4il8d7licqq07a"; depends=[Rcpp]; }; + plyr = derive2 { name="plyr"; version="1.8.6"; sha256="11sjjdn146w95s1vsfmmgdls082cbnm1slv98xvyjhsl2mpx4mga"; depends=[Rcpp]; }; pm4py = derive2 { name="pm4py"; version="1.2.7"; sha256="11xbsmsc9pxd98fy28l3nxzhb6c2pwvh1gmm34jnqn0rjbpb2n9i"; depends=[bupaR petrinetR purrr reticulate stringr]; }; pmc = derive2 { name="pmc"; version="1.0.3"; sha256="06bsab09i9ydgsjx5i50kdb22ldp4g1v83a01kz3mswybi4lv9w2"; depends=[dplyr geiger ggplot2 ouch tidyr]; }; pmcgd = derive2 { name="pmcgd"; version="1.1"; sha256="1pybzvyjmzpcnxrjsas06diy3x83i1r5491s6ccyr63l56hs55d5"; depends=[mixture mnormt]; }; pmd = derive2 { name="pmd"; version="0.1.5"; sha256="18a7j5lvsl2jsay4g7790slj12xkljlnrpvg66cq5cvsid8qm8x8"; depends=[rcdk RColorBrewer rmarkdown shiny]; }; - pmdplyr = derive2 { name="pmdplyr"; version="0.3.0"; sha256="1gyd55h718zf3crhgkdln48jw7y7djgsdjf4j06zr3rgy5mk2sp3"; depends=[dplyr lubridate magrittr pillar rlang tibble tidyr tidyselect vctrs]; }; + pmdplyr = derive2 { name="pmdplyr"; version="0.3.1"; sha256="1155hikxfz9rp111sy96kj2dkka45ip1xi7kximq9ilsn5kwswzn"; depends=[dplyr lubridate magrittr pillar rlang tibble tidyr tidyselect vctrs]; }; pmhtutorial = derive2 { name="pmhtutorial"; version="1.5"; sha256="1hcw8hwpsivbhz86lnzy08q9n8vahnq8f7rmi4xkmg6b44582cqx"; depends=[mvtnorm Quandl]; }; - pmml = derive2 { name="pmml"; version="2.2.0"; sha256="0j2gznmjgzv9ccpgkhpkww99sa165b7jwhx3g61rvbcmg89l3i3m"; depends=[stringr XML]; }; + pmml = derive2 { name="pmml"; version="2.3.0"; sha256="13w5i98yj3ksbryzsgkx3i59iafywygyq1dk8x2c0nlb1nm0dji9"; depends=[stringr XML]; }; pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.3"; sha256="0315kb5x04pidpzr04yaxyynp0mz4ilzp7vkspq4agjkds5hyc88"; depends=[]; }; pmpp = derive2 { name="pmpp"; version="0.1.1"; sha256="1srmkih6zsyf8yf1f045xy1afcz0if6nf1ncslgrq6rgm7330lkw"; depends=[data_table dplyr ggplot2 magrittr MASS Matrix minqa moments plm pracma]; }; pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; }; @@ -11713,10 +11738,9 @@ in with self; { pointRes = derive2 { name="pointRes"; version="1.1.3"; sha256="0yfzidc93ghpf116lxbx4fr0d71wl79y3nz6mkirx4pli6gb8x8d"; depends=[ggplot2 gridExtra plyr TripleR]; }; pointblank = derive2 { name="pointblank"; version="0.3.0"; sha256="0r94yplk5s9ckj8xlrqzc2xb77aik18anvhg6kbprzjzmhmahhrm"; depends=[dplyr magrittr rlang tidyselect]; }; pointdensityP = derive2 { name="pointdensityP"; version="0.3.4"; sha256="0vv8j1yz8n2vmmp6bg2i8w3dchdbybsdxn3sk5d1ync2knih8l2s"; depends=[data_table]; }; - pointdexter = derive2 { name="pointdexter"; version="0.1.1"; sha256="058iv9pk3byyvddbkm8g1vc7kmrkbwglbw0v2ns6w066fwiysv70"; depends=[sp splancs]; }; poio = derive2 { name="poio"; version="0.0-3"; sha256="1smbnqjlicaqq2hswl910yiirzb9zikbk4pqxm9pwpixywj0nkys"; depends=[assertive_base assertive_files assertive_properties assertive_sets assertive_strings assertive_types devtools digest dplyr magrittr R6 stringi tibble whoami]; }; poisDoubleSamp = derive2 { name="poisDoubleSamp"; version="1.1"; sha256="13wyj9jf161218y4zjv2haavlmanihp9l59cvh7x8pfr9dh2dwr8"; depends=[Rcpp]; }; - poisFErobust = derive2 { name="poisFErobust"; version="1.0.1"; sha256="0qgwl5gb2rw043zb0h1rrv038ymsd72r8h9gqdr2xkfbi3mnr24r"; depends=[data_table glmmML]; }; + poisFErobust = derive2 { name="poisFErobust"; version="2.0.0"; sha256="1i6y3745i385y3r45i0xk7ciw1k6brmn709k5qhx8xphq0k4an5n"; depends=[data_table glmmML]; }; poisbinom = derive2 { name="poisbinom"; version="1.0.1"; sha256="0mjxg0s3nck7qrmq4bbrhwxfwr6fqml54s9k8q1mkfzlifa7qyf7"; depends=[Rcpp]; }; poismf = derive2 { name="poismf"; version="0.1.3"; sha256="19jznsz59ch3ksgxii9j7lzaqlpc0wlvxx59ax60w76w2c9m0ify"; depends=[Matrix nonneg_cg Rcpp SparseM]; }; poisson = derive2 { name="poisson"; version="1.0"; sha256="1diyf1b84sr6iai3ghd3kcp6fc6w7fan49wzs1lzvxxsmp15ag2d"; depends=[]; }; @@ -11727,15 +11751,15 @@ in with self; { policytree = derive2 { name="policytree"; version="0.9.0"; sha256="15cqmcdxk25y300z5qvhh981bmzph272sciaa40swj5jw5fz357y"; depends=[BH grf Rcpp]; }; poliscidata = derive2 { name="poliscidata"; version="2.2.3"; sha256="18mmdzf9hrfz36rh1rg1j5q1m131xadppy272y4f4yay0ljafbm2"; depends=[abind car descr ENmisc gplots Hmisc plotrix plyr survey weights xtable]; }; polite = derive2 { name="polite"; version="0.1.1"; sha256="15hiifaf63hx0xn453lr0xhdnxqifrgyrgrymp0a9k3j7qja59jk"; depends=[here httr magrittr memoise ratelimitr robotstxt rvest usethis]; }; - politeness = derive2 { name="politeness"; version="0.4.1"; sha256="0jb5s62qbf5904j0990iv4z1zlqmyvci4dbahkd2lzxsz51ykdq3"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textir tm]; }; + politeness = derive2 { name="politeness"; version="0.5.1"; sha256="0vvqh53kj4vm6wfg2fk5gdxyiycg7zg72m8d7qym9si930jbm32s"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textclean textir tm]; }; politicaldata = derive2 { name="politicaldata"; version="0.1.3"; sha256="1n25k53mmlmmg9p9a36jh4z6xhl1yyv9v1c56mav873105h359wi"; depends=[]; }; - pollen = derive2 { name="pollen"; version="0.71.0"; sha256="0g0g6n8y87jyk7l4s6xpdk60dz4lkg2xp5c5agakkrah8a233920"; depends=[dplyr lubridate purrr]; }; + pollen = derive2 { name="pollen"; version="0.72.0"; sha256="0plxc7rys5q4c1dwammv3b2pnys1hdh5ic0b2ndmv5cbyspf2h0y"; depends=[dplyr lubridate purrr]; }; pollimetry = derive2 { name="pollimetry"; version="1.0.1"; sha256="09zmcwlgzl4fnkdg2m424ibv3izzrm595c7pi4mc3bd1g8sa2ypn"; depends=[brms repmis]; }; pollstR = derive2 { name="pollstR"; version="2.0.1"; sha256="13g5z1hix1bmsxznq5qx82yf445rvvyn67ch9bihxm1hr4cr4sbl"; depends=[httr lubridate purrr stringr]; }; polmineR = derive2 { name="polmineR"; version="0.8.0"; sha256="1j9f83b1lfb02q830zaffrspxrhp58j9l3cc80cxiflmkm9s1jm9"; depends=[data_table DT jsonlite knitr magrittr Matrix pbapply R6 RcppCWB slam stringi tm xml2]; }; polspline = derive2 { name="polspline"; version="1.1.17"; sha256="0c7fnxpqpy3hibiim4yib6l6bq363s97wwvllxp4lp8h06fjcyyn"; depends=[]; }; polyCub = derive2 { name="polyCub"; version="0.7.1"; sha256="0ln1n5w64vgq63gm4mm9wzl9lbp7ppgaxg0ba0yw0xsr5cmkyp37"; depends=[sp]; }; - polyMatrix = derive2 { name="polyMatrix"; version="0.2.4"; sha256="1z7n2ankfd9nrr7l3rm3pcm26pjss0f8wv187g9dxq4db5qx490k"; depends=[MTS polynom]; }; + polyMatrix = derive2 { name="polyMatrix"; version="0.2.5"; sha256="18s2213wdx9jgwq04b5k6vd7xkq39pcpn4z70n9w0h9l0zmjriaw"; depends=[MTS polynom]; }; polyPK = derive2 { name="polyPK"; version="3.1.0"; sha256="0cb83sq8iz4swr73vwhh8n4k62p6321nsy1sz5fba0wiicycxf55"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls sqldf xlsx]; }; polyRAD = derive2 { name="polyRAD"; version="1.1"; sha256="04rhff7yzswilx67ak56vsr4sxfjzhd3d9fihnx2mnyddf1mhamq"; depends=[fastmatch pcaMethods Rcpp]; }; polySegratio = derive2 { name="polySegratio"; version="0.2-5"; sha256="0djw49mbhd7x6jr0f5qkb9akw3fw3ax4w9xv8iwa5f65q5gbxpdf"; depends=[gdata]; }; @@ -11755,22 +11779,23 @@ in with self; { polywog = derive2 { name="polywog"; version="0.4-1"; sha256="02qk1cyvkd77mwlvhj1zzzi0bmy7qxz29j2v730wp7rz4w7h5x5n"; depends=[foreach Formula glmnet iterators Matrix miscTools ncvreg Rcpp stringr]; }; pom = derive2 { name="pom"; version="1.1"; sha256="02jv19apn0kmp1ric2cxajlaad2fmsz4nm4izd2c3691vzas7l83"; depends=[matrixcalc]; }; pomdp = derive2 { name="pomdp"; version="0.9.2"; sha256="0bzppkda355zj467ahcyaf2dsjajyiznzi0y07n9pf9ccr6rh5lg"; depends=[igraph]; }; - pomp = derive2 { name="pomp"; version="2.4"; sha256="19j8aqsxx54xacw6vd3yva8jznqrycc831zs5f08x9r2q1ld6yjp"; depends=[coda deSolve digest magrittr mvtnorm plyr reshape2]; }; + pomp = derive2 { name="pomp"; version="2.7"; sha256="0gqc84hsxms3s2qcb082vsvzfawbc5xyl11f3lkmqkpxmqyazs7h"; depends=[coda deSolve digest magrittr mvtnorm plyr reshape2]; }; pompom = derive2 { name="pompom"; version="0.2.0"; sha256="1alz3lrj7m16vhymsvvrcmf0kmgx88q2f3v4j6wiciqv77bnyai1"; depends=[ggplot2 lavaan qgraph reshape2]; }; pooh = derive2 { name="pooh"; version="0.3-2"; sha256="0qwa5j91aypasvsf4xcfbl6lz7llawdr38jiflzmfak2ad72rv7j"; depends=[]; }; pool = derive2 { name="pool"; version="0.1.4.3"; sha256="065pbvhgvvgv00df4kj4zn7mlbrv2iqa1583k0hlgavn15gfm6d2"; depends=[DBI dbplyr dplyr later R6]; }; poolVIM = derive2 { name="poolVIM"; version="1.0.0"; sha256="19yw6pp5l3jmla4wjbvpjq132f645yks49pzsdv123f3qfr8f0m6"; depends=[EmpiricalBrownsMethod Hmisc ranger]; }; poolfstat = derive2 { name="poolfstat"; version="1.1.1"; sha256="12iwhfj1a87mbis7whgp4z3qg97xkj90rw8b9jsqnfmzhz6fn0yp"; depends=[doParallel foreach]; }; - pooling = derive2 { name="pooling"; version="1.1.1"; sha256="0011w80pxz01scj2sa69m1bcfq797hq3ihpw46fdlxsxavz8prwy"; depends=[cubature dplyr dvmisc ggplot2 ggrepel mvtnorm pracma]; }; + pooling = derive2 { name="pooling"; version="1.1.2"; sha256="19mrzax3k35fhgjpnlrigf0nscsdl3xb7k82s5q472k4bcz7ya5b"; depends=[cubature data_table dplyr dvmisc ggplot2 ggrepel mvtnorm numDeriv]; }; + poolr = derive2 { name="poolr"; version="0.8-2"; sha256="1rkfnrz5x7f9kqpivj0gvs3fxfb9agnm8sybb7wmvvcsmshzrpkf"; depends=[Matrix]; }; pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; }; popEpi = derive2 { name="popEpi"; version="0.4.8"; sha256="1gc7kyik0209pc8mvl6c69lzb3dnkif0mby4l4pq8zfdz73lmi06"; depends=[data_table Epi survival]; }; popKorn = derive2 { name="popKorn"; version="0.3-0"; sha256="1zcl6ms7ghbcjyjgfg35h37ma8nspg15rk2ik82yalqlzxjf7kxw"; depends=[boot]; }; popReconstruct = derive2 { name="popReconstruct"; version="1.0-6"; sha256="0nmf93dy2qf7z9mafpy99ry53aapbxlismn7drn732r8gvravapx"; depends=[coda]; }; - popbio = derive2 { name="popbio"; version="2.6"; sha256="1j8q4rdq8b9r56p0slwkfsknv6linjnmcprrzbck9yr99zfqp067"; depends=[]; }; + popbio = derive2 { name="popbio"; version="2.7"; sha256="02dbb2sinn1n8a9dg8lvf35sc8hb14c90mjymz2gk64xdysf0m2j"; depends=[]; }; popdemo = derive2 { name="popdemo"; version="1.3-0"; sha256="0760ajqaq822m0j092gdqzhgw1mk413k09mmmwyzb0jzj6bd15q3"; depends=[expm MCMCpack]; }; popkin = derive2 { name="popkin"; version="1.3.0"; sha256="1gr2glyavvf2r89zwiama3qhmq32rdzjsqkhv70afmsapk6f4dhr"; depends=[RColorBrewer Rcpp RcppEigen]; }; poplite = derive2 { name="poplite"; version="0.99.23"; sha256="0kf5k4iz4cvzd3avq753jn1gkpnhzi9m4148lq7rgv7h433qydwn"; depends=[DBI dbplyr dplyr igraph lazyeval RSQLite]; }; - poppr = derive2 { name="poppr"; version="2.8.3"; sha256="158sb5v3qmnka431fvgg84pvv1j3mbqmydry63m5yrflzsninv1z"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn polysat rlang shiny vegan]; }; + poppr = derive2 { name="poppr"; version="2.8.5"; sha256="0jq8ykz77z3rgijmhav1sz34a5hkjzs9mlcp5y0354i2l229ylqd"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn polysat rlang shiny vegan]; }; popprxl = derive2 { name="popprxl"; version="0.1.4"; sha256="076aia4qbq5yw2nxafq2ys5n5c7wv77i8k1nmzb3all193vjf203"; depends=[poppr readxl]; }; popsom = derive2 { name="popsom"; version="4.2.1"; sha256="11hzsr69rjklyxkp8jbp6794a4r3cyid0k40dz8d35ca068y2vcl"; depends=[class fields ggplot2 som]; }; poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; }; @@ -11778,7 +11803,7 @@ in with self; { porridge = derive2 { name="porridge"; version="0.0.4"; sha256="1b43yxhqfrkz777rp6yqw4in5i22lkfnh41f05dqnns2qg5hdlyp"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; portalr = derive2 { name="portalr"; version="0.3.1"; sha256="0i3xg3ccccrcamk7yx3nzllf4ir1xg15d3w6byvi4yx6w25khqcn"; depends=[clisymbols crayon dplyr forecast gh httr lubridate lunar magrittr rlang tibble tidyr usethis]; }; portes = derive2 { name="portes"; version="3.0"; sha256="144fipskh6yb6xcz3m5bgh2kwjwa58zaw24y88hzzrdvh9glvyrc"; depends=[forecast]; }; - portfolio = derive2 { name="portfolio"; version="0.4-7"; sha256="0gs1a4qh68xsvl7yi6mz67lamwlqyqjbljpyax795piv46kkm06p"; depends=[lattice nlme]; }; + portfolio = derive2 { name="portfolio"; version="0.5-0"; sha256="1hpz5jhnffsb6qzwh0vciszi5wx7x184mk2dai5ph0xvaxbm23r1"; depends=[lattice nlme]; }; portfolio_optimization = derive2 { name="portfolio.optimization"; version="1.0-0"; sha256="1rdhwffsjc1pa1qq7rqy6dwk8yrcblkmijz94p2w7sf2v4jmwxxr"; depends=[magrittr MASS modopt_matlab xts]; }; portfolioBacktest = derive2 { name="portfolioBacktest"; version="0.2.1"; sha256="15yh3vi8qdahmsy2lic77vfv9c5ssalw08lmhq6vk9dbcl04z5n1"; depends=[digest doSNOW evaluate foreach ggplot2 PerformanceAnalytics quantmod R_utils rlang snow xts zoo]; }; portfolioSim = derive2 { name="portfolioSim"; version="0.2-7"; sha256="1vf46882ys06ia6gfiibxx1b1g81xrg0zzman9hvsj4iky3pwbar"; depends=[lattice portfolio]; }; @@ -11805,8 +11830,8 @@ in with self; { powerpkg = derive2 { name="powerpkg"; version="1.5"; sha256="0mbk2fda2fvyp1h5lk5b1fg398xybbjv0z6kdx7w7xj345misf7l"; depends=[]; }; powerplus = derive2 { name="powerplus"; version="3.1"; sha256="0ayp6x34hkzgris4j3zbbs0r23n81bhww3wgfyy630ri4sk6brrn"; depends=[complexplus expm MASS Matrix phonTools]; }; ppcSpatial = derive2 { name="ppcSpatial"; version="0.2.0"; sha256="1gi57zngc42wcrihg29nn7qa3gaq105ckp76qmczkldshlpd7x4r"; depends=[dplyr ggplot2 htmltools htmlwidgets leaflet magrittr PakPC2017 rgdal scales shiny tidyr tmap]; }; - ppcc = derive2 { name="ppcc"; version="1.1"; sha256="0c22nkp6c6rl2d6c868pnrda1l6h9bxssmdbca3pdc5s8wjxi0nd"; depends=[]; }; - ppclust = derive2 { name="ppclust"; version="0.1.3"; sha256="1480fcjzz1vfmz3sgcdrpfilqklmb1f0h4vna6xkfib5xh624lxb"; depends=[inaparc MASS]; }; + ppcc = derive2 { name="ppcc"; version="1.2"; sha256="17kf97rh0b1zxh7r12rxc2qd1zlrcvlljk69k8w2jchdxiw398sb"; depends=[]; }; + ppclust = derive2 { name="ppclust"; version="1.1.0"; sha256="0vmgjjy7gin88qailzfcwapndl5s8fm6i8kw9gv6aykg9mr75xlv"; depends=[inaparc MASS]; }; ppcong = derive2 { name="ppcong"; version="0.0.2"; sha256="0k34ibzyxak2a8xhsf4jdp50w8k8dsd1nn3gcdcakx8s2rgymq7v"; depends=[curl jsonlite tfse tibble]; }; ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; }; ppgmmga = derive2 { name="ppgmmga"; version="1.2"; sha256="1dq0p3xna5r1kiyhiziz3wc78dfqh362qhna5hmkjzhljawr9jg0"; depends=[cli crayon GA ggplot2 ggthemes mclust Rcpp RcppArmadillo]; }; @@ -11824,20 +11849,19 @@ in with self; { prais = derive2 { name="prais"; version="1.1.1"; sha256="027qsa1nc680bcs61dlyz0wwap5pgxdfzasg9ny37a55hnikxid5"; depends=[lmtest sandwich]; }; praise = derive2 { name="praise"; version="1.0.0"; sha256="1gfyypnvmih97p2r0php9qa39grzqpsdbq5g0fdsbpq5zms5w0sw"; depends=[]; }; praktikum = derive2 { name="praktikum"; version="0.1"; sha256="0kkydgglvqw371fxh46fi86fmdndhwq1n8qj0ynbh2gz1cn86aw1"; depends=[]; }; - praznik = derive2 { name="praznik"; version="7.0.0"; sha256="0v0z8d2cxisfqci9kr19z8q15pckzmh8z5n753b8kahg2xn0zhj4"; depends=[]; }; + praznik = derive2 { name="praznik"; version="8.0.0"; sha256="037lcic87b6136b5fi9g557idd3rvglw995b94xadcdaqcpy906z"; depends=[]; }; prc = derive2 { name="prc"; version="2019.1-23"; sha256="1aw02sj7kkzzkrxs1jpm2skfz2jrd7fyqlfc1mvkqwac39c6a9ma"; depends=[kyotil nlme]; }; prcbench = derive2 { name="prcbench"; version="0.8"; sha256="0bidf7268c130xj4c2pxljgkrppvjg8bmivj9zq0cm9nwhm0fdf5"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; }; prclust = derive2 { name="prclust"; version="1.3"; sha256="0p0sf8248aigs99py8mpzz743jnrf7n1nv5shag15arxz9yx7zn3"; depends=[Rcpp]; }; - prcr = derive2 { name="prcr"; version="0.1.5"; sha256="1hfr0jijnj5nd25rh16i81bsz8kwz0q9vmn7bqgy467cwvypg9k2"; depends=[class dplyr ggplot2 irr lpSolve purrr tibble tidyr]; }; - pre = derive2 { name="pre"; version="0.7.2"; sha256="156wgyv88a5qvdksfhyyim2h1igaba8gf4mgaq6ii6sxppmik4a8"; depends=[earth Formula glmnet Matrix MatrixModels partykit rpart stringr survival]; }; - preText = derive2 { name="preText"; version="0.6.2"; sha256="0pcnqssv542cfajzrqfsbq0jf628nnmcb3nryvd7d5wk4wdkji4q"; depends=[cowplot ecodist ggplot2 proxy quanteda reshape2 topicmodels vegan]; }; + prcr = derive2 { name="prcr"; version="0.2.1"; sha256="0k5vl14akqf8qvak6h7a19qxn4wzpyxq7lyvdhxfh8l4gs4ca2l6"; depends=[class dplyr forcats ggplot2 irr lpSolve magrittr purrr tibble tidyr]; }; + pre = derive2 { name="pre"; version="1.0.0"; sha256="07iai8vkxmx0dhnqy28gwh1hwc2iqg7bb0mwm8c68qpp8ffxwplm"; depends=[earth Formula glmnet Matrix MatrixModels partykit rpart stringr survival]; }; precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; }; precrec = derive2 { name="precrec"; version="0.11"; sha256="1y0d0jqpvh0c96zi2fp7q1f25n5sm6ai2k6l54j9c3plkk1vw3lp"; depends=[assertthat data_table ggplot2 gridExtra Rcpp]; }; predhy = derive2 { name="predhy"; version="0.1.0"; sha256="1m4ysryh66blqnvnskfwmjbz85pziqlii12jv9gpf2a3jnl5dvij"; depends=[]; }; predict3d = derive2 { name="predict3d"; version="0.1.3.3"; sha256="1kb3jacpgzln1ddnkfzhvfpzzf9wig60lppca6iy0fvq5cm8ddr4"; depends=[dplyr ggiraphExtra ggplot2 magrittr modelr moonBook plyr prediction purrr reshape2 rgl rlang stringr TH_data tidyr]; }; prediction = derive2 { name="prediction"; version="0.3.14"; sha256="0awlq5lxfia6m2b91w73rksp93rbwv5gwqb36wbji4rgq41rzbrx"; depends=[data_table]; }; predictionInterval = derive2 { name="predictionInterval"; version="1.0.0"; sha256="029hc57cblfcbqckrghf95l2rkn7acgb4yr36da01bx8bmpww0bn"; depends=[ggplot2 MASS MBESS pbapply]; }; - predictmeans = derive2 { name="predictmeans"; version="1.0.1"; sha256="06zspg1v0x1qqaah7xj5jdaqjv7asnzmgybyyzx3j26v4h59p350"; depends=[ggplot2 lme4 Matrix nlme numDeriv pbkrtest plyr]; }; + predictmeans = derive2 { name="predictmeans"; version="1.0.2"; sha256="191kidf66xy8g779chpsyxp02hgn1npb4acga9nnd5f428bvzfc7"; depends=[ggplot2 lme4 Matrix nlme numDeriv pbkrtest plyr]; }; predictoR = derive2 { name="predictoR"; version="1.1.0"; sha256="12y23q08m7v4dl6anbkhf7zxy8wkah5bxy1c2fdcwb6ng3snpfvb"; depends=[ada colourpicker corrplot DT e1071 flexdashboard glmnet kknn neuralnet randomForest rattle ROCR rpart shiny shinyAce shinydashboardPlus shinyjs shinyWidgets tidyverse xgboost zip]; }; predictrace = derive2 { name="predictrace"; version="1.0.0"; sha256="1vpamn1j1jqdjar14j7fn4gvr8wq8lpqfnrwifgl0qvpa4y1938y"; depends=[dplyr here tidyr]; }; predkmeans = derive2 { name="predkmeans"; version="0.1.1"; sha256="0352c50zlyzn8fczrkinayllj9jp978njjl7dazzkzypx0p20va5"; depends=[e1071 maxLik mgcv Rcpp RcppArmadillo]; }; @@ -11848,9 +11872,6 @@ in with self; { prefmod = derive2 { name="prefmod"; version="0.8-34"; sha256="1fkqp75w3im6b0l4sfs1yr2id8ffp2xbpb6lkgnv833cri787d5x"; depends=[colorspace gnm]; }; prepdat = derive2 { name="prepdat"; version="1.0.8"; sha256="19rxyss96cmjhzm69f6l1cd3vkw3wskzhxnbmrz4546x00gf9g5v"; depends=[dplyr psych reshape2]; }; prepplot = derive2 { name="prepplot"; version="0.7"; sha256="1yqiq78iqsk49ky913x4h8f3638blyamrwdhhcmzfgy4n7dnk11x"; depends=[plotrix shape]; }; - preprocomb = derive2 { name="preprocomb"; version="0.3.0"; sha256="08dhzil8prmjb6if0yba9pjncfxf5zzvlrrabva7c5jhny806c5g"; depends=[arules caret clustertend DMwR doParallel e1071 foreach randomForest zoo]; }; - preprosim = derive2 { name="preprosim"; version="0.2.0"; sha256="1z10ranfal51vzsnndfaw5aqddh2w1xx8h50j1p7gx4fi90d0waq"; depends=[caret DMwR doParallel e1071 foreach ggplot2 reshape2]; }; - preproviz = derive2 { name="preproviz"; version="0.2.0"; sha256="0jb85qkzywsd2iyfynd8ngkc136m4qc38phc3fgxm2qw30dacmyh"; depends=[caret ClustOfVar DMwR ggdendro ggplot2 gridExtra randomForest reshape2]; }; preputils = derive2 { name="preputils"; version="1.0.2"; sha256="0cww3x7375ck56cm14ssalvpgvsdi4myr3p19zy4fcjy6fgyyxc5"; depends=[data_table]; }; prereg = derive2 { name="prereg"; version="0.4.0"; sha256="1jhlgp7ajq6mx7gn4kf3b7wqzs3v0678pa1r6p4mgvvynic8rnqj"; depends=[rmarkdown]; }; presens = derive2 { name="presens"; version="2.1.0"; sha256="175nr9pqn3m6kh9bcc1gxqmqv05xdsqdw9lx385lmm1g947d2159"; depends=[marelac measurements]; }; @@ -11868,9 +11889,10 @@ in with self; { prevalence = derive2 { name="prevalence"; version="0.4.0"; sha256="0vnmglxj1p66sgkw4ffc4wgn0w4s281fk2yifx5cn4svwijv30q0"; depends=[coda rjags]; }; prevederer = derive2 { name="prevederer"; version="0.0.1"; sha256="0vkx9nrlgp36xbl95lrb5sb5yivxlcw4yvbs8hgbm31kh0vbz32f"; depends=[httr]; }; prevtoinc = derive2 { name="prevtoinc"; version="0.12.0"; sha256="0ypdxcx9gh87a7ih3cw3yai47rzv41qwh4kpk6007ai8jkjv4n9w"; depends=[dplyr purrr rlang tibble]; }; + prewas = derive2 { name="prewas"; version="1.0.0"; sha256="163lpip7b1m65laqswgrai5rxpsw226c6n37bs3f1yi89hs5ba30"; depends=[ape future future_apply phangorn vcfR]; }; priceR = derive2 { name="priceR"; version="0.1.0"; sha256="09jlf8c1lfiqmpm2vdgkacsracwcjgi6xgvlakny2c4iyir45sh5"; depends=[dplyr gsubfn stringr]; }; pricesensitivitymeter = derive2 { name="pricesensitivitymeter"; version="1.1.1"; sha256="0zlvrzrqndnrwawwzqwpj7c7r86mb80njhv7dcm8l5qygnc4xz3b"; depends=[survey]; }; - prim = derive2 { name="prim"; version="1.0.16"; sha256="0i5jpk798qbvyv9adgjbzpg4dvf7x51bcgbdp38fzdnam6g88y5a"; depends=[misc3d rgl]; }; + prim = derive2 { name="prim"; version="1.0.17"; sha256="037gfs6ibkk7rjv21vi2k5jx24plss0jsxkn12arvfg5p6xan08k"; depends=[misc3d rgl]; }; primePCA = derive2 { name="primePCA"; version="1.0"; sha256="0kpyqv3l58xcyd98a7c7ggsna30j6k62aliidlyxgv2ya0g0dshv"; depends=[MASS Matrix softImpute]; }; primefactr = derive2 { name="primefactr"; version="0.1.1"; sha256="11hi75jwjxrl9p5m8yjwjb20pc9y9vkhi8sjrnisdq2hm53m483w"; depends=[]; }; primer = derive2 { name="primer"; version="1.1.1"; sha256="1hw7qd0xq3bvzk5ms9q568a3nkj3ws4jnzbmlypy8c5x3ly6pl1d"; depends=[deSolve lattice]; }; @@ -11879,15 +11901,15 @@ in with self; { princurve = derive2 { name="princurve"; version="2.1.4"; sha256="1b3grra328wkfsmqkkwp3lwdzhbdiwyq380qi5pl9r2jc6arnppj"; depends=[Rcpp]; }; prinsimp = derive2 { name="prinsimp"; version="0.8-8"; sha256="074a27ml0x0m23hlznv6qz6wvfqkv08qxh3v1sbkl9nxrc7ak4vn"; depends=[]; }; printr = derive2 { name="printr"; version="0.1"; sha256="13yqqcwfqnbhvcxwrr6j45qhnbxng3qwn2ygkr809gibg9grw471"; depends=[knitr]; }; - prioGene = derive2 { name="prioGene"; version="1.0.0"; sha256="0s4vcx5v9agzf84k45lb4ziqqhj9krf096m66m927lb6ik8gx58h"; depends=[AnnotationDbi org_Hs_eg_db]; }; - prioritizr = derive2 { name="prioritizr"; version="4.1.4"; sha256="1z8p9faacbi61sfxyqz0k7zlxyqc03gg9rc9f4a5zbdcnx83bhf3"; depends=[ape assertthat BH data_table doParallel igraph magrittr Matrix plyr proto raster Rcpp RcppArmadillo rgeos sp tibble uuid]; }; + prioGene = derive2 { name="prioGene"; version="1.0.1"; sha256="0k1rlvmfhj1m2zp5zaac8wcwjypd6f4dd8fxxsyrzsafp9aw189l"; depends=[AnnotationDbi org_Hs_eg_db]; }; + prioritizr = derive2 { name="prioritizr"; version="4.1.5"; sha256="08ahfwpyvvz0faii5b4r8dxrkdhvj85gvys1yz1hsnxhnya6m5pi"; depends=[ape assertthat BH data_table doParallel igraph magrittr Matrix plyr proto raster Rcpp RcppArmadillo rgeos sp tibble uuid]; }; prioritizrdata = derive2 { name="prioritizrdata"; version="0.2.2"; sha256="1gljrll89r2y6nb4jwcp1pyjs5qrahqawi84kgg74w2q6xq65kga"; depends=[raster sp]; }; prioritylasso = derive2 { name="prioritylasso"; version="0.2.3"; sha256="1hmf81vcri0sfaphc0221skpvb2gz0zvxlmlhv7k8rhs1pvnqi8g"; depends=[glmnet survival]; }; prism = derive2 { name="prism"; version="0.1.0"; sha256="0d2llrpw5y0svrdzbk52pjrfp76lknrw4r8ciqq0cq3l6kbynh9r"; depends=[dplyr ggplot2 httr lubridate magrittr purrr raster readr stringr]; }; prismatic = derive2 { name="prismatic"; version="0.2.0"; sha256="0j077khvagzs9lxrryi4q1czk1129r93cqf1i1hiz0b3wij2bwsg"; depends=[farver]; }; prisonbrief = derive2 { name="prisonbrief"; version="0.1.0"; sha256="1fnhg6vqdabdnhvgd19vnkfrdgz8a53snfrx6m6mmdwb6cvavb8m"; depends=[data_table dplyr httr magrittr passport rlang rnaturalearth rnaturalearthdata rvest stringr tibble tidyr xml2]; }; prithulib = derive2 { name="prithulib"; version="1.0.2"; sha256="12ybksrvxzc5gjz8m38cs35b7r3kd8m0zqm2c67pqw38vq82sjxm"; depends=[]; }; - prnsamplr = derive2 { name="prnsamplr"; version="0.1.0"; sha256="0hdxbdkmxfd3ax1qfc4fj9bbxz8cv08qzcjwpxgkapgm2jwgxpgc"; depends=[]; }; + prnsamplr = derive2 { name="prnsamplr"; version="0.1.1"; sha256="1nwssm5h43qakqfk4m54m0ks5n0942p4r1ad0v57lmpx50pnnaaw"; depends=[]; }; pro = derive2 { name="pro"; version="0.1.1"; sha256="0f0iliq7bhf313hi0jbwavljic4laxfc0n3gac5y6hzm39gvvgag"; depends=[]; }; proPubBills = derive2 { name="proPubBills"; version="0.1"; sha256="1fpn9x31jjahdyk0f30mbb3ijj4dsghrq9q94r04pjsgr2jw23zx"; depends=[dplyr httr stringr]; }; prob = derive2 { name="prob"; version="1.0-1"; sha256="05qcrsl790hn7p3ap4zj5i1b1sf674wvvrh42lyb7a0nsc09iq9n"; depends=[combinat fAsianOptions]; }; @@ -11896,15 +11918,14 @@ in with self; { probemod = derive2 { name="probemod"; version="0.2.1"; sha256="1cgjr03amssc9rng8ky4w3abhhijj0d2byzm118dfdjzrgmnrf9g"; depends=[]; }; probhat = derive2 { name="probhat"; version="0.2.0"; sha256="04pzvrny045p8rpvh7va55qfak0b3751x2bi3sp9hqiwr8dys02z"; depends=[barsurf intoo kubik]; }; probout = derive2 { name="probout"; version="1.1.1"; sha256="1hasrvxdig8n3fhzsbmq27050dyanzp1j0qlybnrkb41k9gyljda"; depends=[FNN MASS mclust]; }; - probsvm = derive2 { name="probsvm"; version="1.00"; sha256="1k0zysym7ncmjy9h7whwi49qsfkpxfk7chfdjrydl6hn6pscis37"; depends=[kernlab]; }; proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; }; - processR = derive2 { name="processR"; version="0.1.0"; sha256="1c36f1l9ylj01hr5fs1413kixd3jx6fdhha4rw1mpcjbn9cxnjgq"; depends=[diagram dplyr flextable ggiraphExtra ggplot2 jtools lavaan magrittr modelr mycor officer prediction psych purrr rlang rrtable semTools shiny shinyWidgets stringr TH_data tidyr tidyselect]; }; - processanimateR = derive2 { name="processanimateR"; version="1.0.2"; sha256="0yz61m5f71lqz3f1y1lsnpbp3cpypsvj7k2cbiixl95qlpxhd1is"; depends=[bupaR DiagrammeR dplyr htmlwidgets magrittr processmapR rlang stringr tidyr]; }; + processR = derive2 { name="processR"; version="0.2.3"; sha256="0zdckw8c4xavrlkaihj3il35whfcam27ra7f4xxhypf9fa9dhzr4"; depends=[diagram dplyr flextable ggplot2 ggrepel interactions lavaan officer predict3d psych purrr rlang rmarkdown rrtable semTools stringr tidyr tidyselect ztable]; }; + processanimateR = derive2 { name="processanimateR"; version="1.0.3"; sha256="1ywn2hv2wg35i6ww1ckr6gcb709sf1c836ml542g8iiggwk3cvz5"; depends=[bupaR DiagrammeR dplyr htmltools htmlwidgets magrittr processmapR rlang stringr tidyr]; }; processcheckR = derive2 { name="processcheckR"; version="0.1.2"; sha256="1l8qx7ivw6vwmw7d7x7dawv11aklbyjwpyial3crhamnj5389ngj"; depends=[bupaR dplyr edeaR glue rlang stringr]; }; processcontrol = derive2 { name="processcontrol"; version="0.1.0"; sha256="0c0bksgq24blfkdgp5bn49sjnaajrg5bag8qzb5zffxbhnm4s30x"; depends=[plyr]; }; - processmapR = derive2 { name="processmapR"; version="0.3.3"; sha256="0skiavjays0qp9yvxfdzhp7iagz3zirq90m08lcl6sa83n5dj8rr"; depends=[bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms miniUI plotly purrr RColorBrewer rlang scales shiny stringr tidyr]; }; + processmapR = derive2 { name="processmapR"; version="0.3.4"; sha256="0kq940j8frmbal1nqxwv7wshkyv7y3vhax6zr0ngkf18xv73y76z"; depends=[BH bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms htmltools miniUI plotly purrr RColorBrewer Rcpp rlang scales shiny stringr tidyr]; }; processmonitR = derive2 { name="processmonitR"; version="0.1.0"; sha256="1ckr438yifpsh095j6bb65dq3rdm7cfm8k7qsjmcqwjkww4j74z8"; depends=[bupaR dplyr edeaR ggplot2 magrittr miniUI shiny]; }; - processx = derive2 { name="processx"; version="3.4.1"; sha256="1g6ipcaxg9y94lyrnbp7kkbqfkcdh1fyrqjjclbjp3x7iysdvazi"; depends=[ps R6]; }; + processx = derive2 { name="processx"; version="3.4.2"; sha256="02awswxq6wh3rl99dncw5n6c1xmd0v81xcdp2dfyi6vm6b3gz84l"; depends=[ps R6]; }; prodest = derive2 { name="prodest"; version="1.0.1"; sha256="16nqgd9wrjfxymwbxrnlak54cagbv3fxgbql0w5bxnmyrbbqy509"; depends=[AER DEoptim dplyr Matrix Rsolnp]; }; prodigenr = derive2 { name="prodigenr"; version="0.5.0"; sha256="1h15fwd4rclja0q80y119sah1qbyjlbaqxg360ywq9ig151lxsjq"; depends=[fs git2r rmarkdown rprojroot usethis withr]; }; prodlim = derive2 { name="prodlim"; version="2019.11.13"; sha256="03wvh3kirp1prac5nky6a5whs97rvaf4hc27x0fnh51sa17r42b8"; depends=[KernSmooth lava Rcpp survival]; }; @@ -11912,7 +11933,6 @@ in with self; { productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; }; prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; }; profExtrema = derive2 { name="profExtrema"; version="0.2.0"; sha256="13fn32v4jryyw2sc6g76fmf2ivbwql0z39wqpl6ggmiwnj95sfm7"; depends=[DiceKriging KrigInv lhs MASS microbenchmark pGPx quantreg rcdd RColorBrewer]; }; - profdpm = derive2 { name="profdpm"; version="3.3"; sha256="07lhjavrx4fa5950w928mfpddmmnmvdapl5n6mv49m8h3bxs4nmy"; depends=[]; }; proffer = derive2 { name="proffer"; version="0.0.2"; sha256="083cxxpwkdjnj15ficfb77yiq96j0xf7z5j7h5slm9spazkr38v6"; depends=[processx profile RProtoBuf]; }; profile = derive2 { name="profile"; version="1.0"; sha256="0m7fm490gqkbmnbdq3lac87zqb9qyx6546rlpa130rq1jnlgxfp6"; depends=[rlang tibble withr]; }; profileModel = derive2 { name="profileModel"; version="0.6.0"; sha256="0yq8hy43h62hlz8bbf9ila4a3xcwizi1if27b78xc5y857ncwad8"; depends=[]; }; @@ -11925,10 +11945,11 @@ in with self; { prognosticROC = derive2 { name="prognosticROC"; version="0.7"; sha256="0lscsyll41hpfzihdavygdzqw9xxjp48dmy4i17qsx5h01jl1h4i"; depends=[survival]; }; progress = derive2 { name="progress"; version="1.2.2"; sha256="0dgzb362641aqm8xd88iqa8jmpdm43xs0aba0d5kk6fvapnxi95l"; depends=[crayon hms prettyunits R6]; }; progressr = derive2 { name="progressr"; version="0.4.0"; sha256="1wgqabp8qmg58gymv3wq9ci5mp64isbdgg1by5s9g8ncwyhnfalb"; depends=[digest]; }; - proj4 = derive2 { name="proj4"; version="1.0-8.1"; sha256="0zhal76wd9k8l1hjm00sgzlxi6c2sc7l8msr9firzmsg07qai8m3"; depends=[]; }; + proj4 = derive2 { name="proj4"; version="1.0-10"; sha256="1l6i4735ki6y2qhmg1gmrj93rzrvgpzi23rr3a1akkqp58bnyfaz"; depends=[]; }; projections = derive2 { name="projections"; version="0.3.1"; sha256="12vskql6x04jzik72a0vx83amfj01w9f7mxn052vsv7aaljbi124"; depends=[distcrete ggplot2 incidence]; }; - projects = derive2 { name="projects"; version="2.0.0"; sha256="0m9177ldp0d3f9k2ifrbww5snhvaql8h96shcdm46i1kjnzj4070"; depends=[dplyr fs lubridate magrittr purrr readr rlang rstudioapi sessioninfo stringr tibble zip]; }; + projects = derive2 { name="projects"; version="2.1.0"; sha256="0clrspmrlfi8w8h8afbpfjfg74qn1ys6zsb8gj3g5p0lcap2269g"; depends=[dplyr fs lubridate magrittr purrr readr rlang rstudioapi sessioninfo stringr tibble vctrs zip]; }; projmgr = derive2 { name="projmgr"; version="0.1.0"; sha256="1iysxcl6awvp7zbm04zyq4d9659fcz3sy711jnycsxhsk8hsvmc2"; depends=[gh magrittr]; }; + projpred = derive2 { name="projpred"; version="1.1.5"; sha256="0xa5zqcn9nh8i8rsjvim66a8qi95isb3h2hl1hy2aaws056lljlz"; depends=[ggplot2 loo Rcpp RcppArmadillo]; }; promises = derive2 { name="promises"; version="1.1.0"; sha256="01l0ydjvvy6afcg5d6pzvk1ikd3djq8n2flv8c831ksn68z0zsn8"; depends=[later magrittr R6 Rcpp rlang]; }; promote = derive2 { name="promote"; version="1.1.1"; sha256="1cdz4xqinyzpbbgkxxd4f86n1h8zj88vp5z6w01cxd5ykyjf5411"; depends=[httr jsonlite stringr]; }; promotionImpact = derive2 { name="promotionImpact"; version="0.1.2"; sha256="1mx745q37fqgn46y9qj3ql54r747qfab1yq8878g08cq6y696rmp"; depends=[crayon data_table dplyr ggplot2 ggpubr KernSmooth lmtest prophet Rcpp reshape2 scales stringr strucchange]; }; @@ -11936,11 +11957,11 @@ in with self; { propOverlap = derive2 { name="propOverlap"; version="1.0"; sha256="0q72z9vbkpll4i3wy3fq06rz97in2cm3jjnvl6p9w8qc44zjlcyl"; depends=[Biobase]; }; propagate = derive2 { name="propagate"; version="1.0-6"; sha256="17jinz1jramlsf87i7vyn2qp82rc1dacljfaxxplrk3crhw3bhs7"; depends=[ff MASS minpack_lm Rcpp tmvtnorm]; }; properties = derive2 { name="properties"; version="0.0-9"; sha256="1zd66cg31yd53rqsc0cwxhlpfn7kvc67qdh3vyj9qib8kwxaw1zl"; depends=[]; }; - prophet = derive2 { name="prophet"; version="0.5"; sha256="0jqzmzgx3z4rl5478mw620sg539b2fwijcrzhd7jikrsv2fy7jcn"; depends=[dplyr dygraphs extraDistr ggplot2 Rcpp rlang rstan scales tidyr xts]; }; + prophet = derive2 { name="prophet"; version="0.6"; sha256="17whiynwfff7xajj89flr80kz2k4x559cbhf72fvyf9xpqg3vg09"; depends=[dplyr dygraphs extraDistr ggplot2 Rcpp rlang rstan scales tidyr xts]; }; proportion = derive2 { name="proportion"; version="2.0.0"; sha256="0a71f6hz6blb7550m9x0di84vp51yjhnn952301rwlrh3axf6dbr"; depends=[ggplot2 TeachingDemos]; }; propr = derive2 { name="propr"; version="4.2.6"; sha256="16ghgzpwz6q9zlaa0pc8wqv0wpz81c75n7zwjyr1lv9y19qwlkfg"; depends=[fastcluster ggplot2 igraph Rcpp]; }; - prospectr = derive2 { name="prospectr"; version="0.1.3"; sha256="18lh03xg6bgzsdsl56bjd63xdp16sqgr3s326sgifkkak8ffbv7q"; depends=[foreach iterators Rcpp RcppArmadillo]; }; - protViz = derive2 { name="protViz"; version="0.5.1"; sha256="0cznzm1ijlq33yd5wsa61prav77y2vi698w0n2fx1xcv504c4bjv"; depends=[Rcpp]; }; + prospectr = derive2 { name="prospectr"; version="0.2.0"; sha256="16ba2dmg1v2gsd66s25c28s413vg5xcbhicb75qwpijlgmjvfpgi"; depends=[foreach iterators Rcpp RcppArmadillo]; }; + protViz = derive2 { name="protViz"; version="0.6.3"; sha256="1ldciqh3f43xr9663yyhd9r6qwrg4c4vmkprlcancbnd460wakg7"; depends=[Rcpp]; }; protag = derive2 { name="protag"; version="1.0.0"; sha256="1iaw2w1d7hdvlg5vplpqc49wq08dgmm0ifvp2v0ggqb8invvdnw8"; depends=[dplyr ggplot2 RColorBrewer]; }; proteomicdesign = derive2 { name="proteomicdesign"; version="2.0"; sha256="01s47pgwxy4xx10f3qmbfv59gbaj0qw017kpkpsn33s8w7ad63r0"; depends=[MASS]; }; proteomics = derive2 { name="proteomics"; version="0.2"; sha256="01cd4sb79gcx8gbzl624scvjbwhgcsca1wdvvfkhsv7jfwdd2ry2"; depends=[foreach ggplot2 plyr reshape2]; }; @@ -11962,11 +11983,11 @@ in with self; { prozor = derive2 { name="prozor"; version="0.2.11"; sha256="1a2k69fvgi6vxgczk81kh8r2jxc6nirc51w6ac239rqjzb1zyhjm"; depends=[AhoCorasickTrie doParallel dplyr foreach Matrix plyr readr seqinr stringr]; }; prrd = derive2 { name="prrd"; version="0.0.2"; sha256="0ifs55yqvwbcs3xyc90yi763fgavdhajk1ba73g1kchn2ak39qhb"; depends=[config crayon data_table DBI liteq RSQLite]; }; pryr = derive2 { name="pryr"; version="0.1.4"; sha256="06vj5xl9x37kbd3l5bw7sbgfdnp37spvrjrn976rxi04clqk966k"; depends=[codetools Rcpp stringr]; }; - ps = derive2 { name="ps"; version="1.3.0"; sha256="1lcq7r0q4jb8x6k023zr2ydj2dg925bqqbkhx1phpnyjrk897498"; depends=[]; }; + ps = derive2 { name="ps"; version="1.3.2"; sha256="0127q6pw9iw8hhcfp231gmdh29nahh2n5jzc38avrzy7yrm4bwl9"; depends=[]; }; psData = derive2 { name="psData"; version="0.2.2"; sha256="013hb6lk9rm2w08m5jbw90ndrcd4wyy2h125jx07c9bs60wh4mp4"; depends=[countrycode DataCombine reshape2 rio xlsx]; }; psSubpathway = derive2 { name="psSubpathway"; version="0.1.1"; sha256="1jzymhh1dy5w735fppqza7ilspsvyidkrdpq2yd3j5xfjckzfh5w"; depends=[GSVA igraph mpmi pheatmap]; }; psbcGroup = derive2 { name="psbcGroup"; version="1.4"; sha256="0l1hmgw4sislryws8hv7r2nglhcs6g9khg0372a70djvhz2l6gfi"; depends=[LearnBayes mvtnorm SuppDists]; }; - pscl = derive2 { name="pscl"; version="1.5.2"; sha256="1phf3awsfr4ncqfqzin5m1pz0g7y1zhbcm2sz7358ssw914fd7rc"; depends=[MASS]; }; + pscl = derive2 { name="pscl"; version="1.5.5"; sha256="0vzf5wazs92bhqhqd66v3vwmbfmnh67gb2466g1xxawim649nk05"; depends=[MASS]; }; pscore = derive2 { name="pscore"; version="0.1-2"; sha256="1sfkxs2kv8lq87j3q9ci7j38c7gzfkp2l36lwcdhiidr2nls2x0c"; depends=[ggplot2 lavaan reshape2]; }; psd = derive2 { name="psd"; version="1.2.0"; sha256="017iqz6awc7k3kv74jdc8wak62zzgnxvakl0qp774kx1kpv6hgji"; depends=[RColorBrewer Rcpp RcppArmadillo signal zoo]; }; psda = derive2 { name="psda"; version="1.3.3"; sha256="0asw6pq8zifacr42dwhy52xhgvl82q95a34x4ymbylj1mipka54k"; depends=[ggplot2 plyr raster rgeos sp]; }; @@ -11974,10 +11995,10 @@ in with self; { pseudo = derive2 { name="pseudo"; version="1.4.3"; sha256="0ccf3gz2g7g5y4acpj2qnb39hrghhdganizlddg6rx7al869fffs"; depends=[geepack KMsurv]; }; pseudorank = derive2 { name="pseudorank"; version="0.3.8"; sha256="1nj2cq8v8gj8wg23yrn8v21jwgd572gbz1wplpaxhk5v2ckhf1p0"; depends=[doBy Rcpp]; }; pseval = derive2 { name="pseval"; version="1.3.1"; sha256="1jgnv1l9adhwrmkmp6wkzz7jf7w1hyqy47ajr29l21p4g037py45"; depends=[survival]; }; - psfmi = derive2 { name="psfmi"; version="0.1.0"; sha256="1gp3gk5qjdfjh6aw2a4y8r9dk1gjsmd9lidr9j43zvc3xsk7pina"; depends=[car foreign ggplot2 miceadds mitools norm pROC ResourceSelection rms survival]; }; - psgp = derive2 { name="psgp"; version="0.3-18"; sha256="1jfkqwqnmzj3m1d9gxbp2rjkbqb0di75gh78zg861by5qhhaz1a7"; depends=[automap doParallel foreach gstat intamap Rcpp RcppArmadillo rgdal sp]; }; - psica = derive2 { name="psica"; version="1.0.1"; sha256="1xgq2xqs26v6y91b2b23b5imzjgxv5dihbn69yyjq91a3nvrfk7p"; depends=[BayesTree gridBase party partykit randomForest Rdpack rpart]; }; - psidR = derive2 { name="psidR"; version="1.9"; sha256="0ljfjxsj6krxyk3ss1n0ccymca4hiwkp9fdb1h1l4rqm0dsj8jj8"; depends=[data_table foreign futile_logger openxlsx RCurl SAScii]; }; + psfmi = derive2 { name="psfmi"; version="0.2.0"; sha256="11gmc48frayyn9w5hnjfis1v92mg1v640s69dzkdvqxdkrzh50bg"; depends=[car dplyr foreign ggplot2 lme4 magrittr mice miceadds mitml mitools norm pROC purrr ResourceSelection rms rsample survival tibble tidyr]; }; + psgp = derive2 { name="psgp"; version="0.3-19"; sha256="0yaf69zk4zkpgx5zyksdxb2g4az0ci8v6r23phzcis9fd21y70ds"; depends=[automap doParallel foreach gstat intamap Rcpp RcppArmadillo rgdal sp]; }; + psica = derive2 { name="psica"; version="1.0.2"; sha256="1cnrd1p8ikv0hl97jwypw8np1ypa0d8k2mizwd1clkv7inbb264g"; depends=[BayesTree gridBase party partykit randomForest Rdpack rpart]; }; + psidR = derive2 { name="psidR"; version="2.0"; sha256="033bi61l9jslz4xhii19i23c10n4irqbzsfm5n54nzznwg85i6d9"; depends=[data_table foreign futile_logger openxlsx RCurl SAScii]; }; pso = derive2 { name="pso"; version="1.0.3"; sha256="0alar695c6kc1rsvwipsrvlxc93f3sy9l0yhp0mggyqgxkkvy406"; depends=[]; }; psoptim = derive2 { name="psoptim"; version="1.0"; sha256="1yziabkd3h05cfl5jy5l8ji2y3w21acvxsq3inxyh0iwyr8qdkkl"; depends=[]; }; pspearman = derive2 { name="pspearman"; version="0.3-0"; sha256="1l5mqga7b5nvm6v9gbl1xsspdqsjqyhhdn4gc4qlz6ld7fqfq6cx"; depends=[]; }; @@ -11987,31 +12008,32 @@ in with self; { pstest = derive2 { name="pstest"; version="0.1.3.900"; sha256="1rhd4vgqpr9yq0pc3xql3nfgl30v20ldywapp9n967ky2dja4k0z"; depends=[glmx MASS]; }; psy = derive2 { name="psy"; version="1.1"; sha256="027whr670w65pf8f7x0vfk9wmadl6nn2idyi6z971069lf01wdlk"; depends=[]; }; psych = derive2 { name="psych"; version="1.9.12.31"; sha256="02i9p6appf15hjdsi58g39bzs9as40f9qhy8m7ki30hd1fz1vrr5"; depends=[lattice mnormt nlme]; }; - psychNET = derive2 { name="psychNET"; version="0.0.3"; sha256="14z2hiq2acc5jar8shhmp310f7fing916yhljjhy3knksdd05mjq"; depends=[bigtime car crayon fastDummies glmnet graphicalVAR gtools Hmisc igraph imputeTS longitudinal MASS Matrix mgm mlVAR networktools ordinalNet qgraph SparseTSCGM sparsevar vars]; }; + psychNET = derive2 { name="psychNET"; version="0.0.4"; sha256="1cymrmsw0kbjbxw6h5ly8xa6mh83vqdw8z94dr9wv66lfzs9mswr"; depends=[bigtime car corpcor crayon doParallel fastDummies ggplot2 glmnet graphicalVAR gtools Hmisc igraph imputeTS longitudinal MASS Matrix mgm mlVAR mvtnorm ncvreg networktools ordinalNet picasso qgraph reshape2 SparseTSCGM vars]; }; psychReport = derive2 { name="psychReport"; version="0.7"; sha256="1dapzq20aw9l4r5grfjd2sf14ga3wcxg67pq5fj6q4bcg5dggc9l"; depends=[cli crayon dplyr ez testthat xtable]; }; psychTools = derive2 { name="psychTools"; version="1.9.12"; sha256="1l1q3l6i40kkbvfjx7nri21jqy9vhdbcc7b5g56a5cqdimkddvkn"; depends=[foreign psych]; }; - psychmeta = derive2 { name="psychmeta"; version="2.3.4"; sha256="0nbgv7abi9i96piqggq9gsyv5p4x2h3rnr50f347mnfg55syha18"; depends=[boot cli crayon data_table dplyr ggplot2 MASS metafor nor1mix progress purrr RCurl reshape2 rlang stringi stringr tibble tidyr tmvtnorm xml2]; }; + psychmeta = derive2 { name="psychmeta"; version="2.3.6"; sha256="16fqy75a5zrfp7jnm49fl6qmagw747zwdd5nkg3a3k4wc0kbn56w"; depends=[boot cli crayon curl data_table dplyr ggplot2 MASS metafor nor1mix progress purrr reshape2 rlang stringi stringr tibble tidyr tmvtnorm]; }; psycho = derive2 { name="psycho"; version="0.5.0"; sha256="0vcabk9j1yf7nz8fh3xg5rr2ia97mfkka23vbv9jya75dhgd84h2"; depends=[bayestestR dplyr effectsize ggplot2 insight parameters performance scales stringr tidyr]; }; psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; }; - psychomix = derive2 { name="psychomix"; version="1.1-7"; sha256="16dh2y2z37h72ym1dv2xg0v20wjzlnp06h8f923cdy1zigk69d2r"; depends=[flexmix Formula lattice modeltools psychotools]; }; - psychonetrics = derive2 { name="psychonetrics"; version="0.5.1"; sha256="1sa0dkicr7v0wxi0b900zx43z30bcf9pzdw7kihcnykjd8q3vzwd"; depends=[abind corpcor crayon dplyr glasso IsingSampler lavaan magrittr Matrix matrixcalc mgcv mvtnorm numDeriv optimx pbapply pbv qgraph Rcpp RcppArmadillo ucminf VCA]; }; - psychotools = derive2 { name="psychotools"; version="0.5-0"; sha256="145x1zdjvasdyf72hp6wdsw0m1r5c97gzzlbnnmdbcrjqh5zyglb"; depends=[]; }; - psychotree = derive2 { name="psychotree"; version="0.15-2"; sha256="0svb3i3d9r3hvqh17lfzyzj2rnf2wm1wy6sspx67ngdrfy6d1p91"; depends=[Formula partykit psychotools]; }; + psychomix = derive2 { name="psychomix"; version="1.1-8"; sha256="0lfhfcmrk65gkr1yp317b515vmadbcf0vjcnc76d07yp6yfkz5qw"; depends=[flexmix Formula lattice modeltools psychotools]; }; + psychonetrics = derive2 { name="psychonetrics"; version="0.6"; sha256="1xq12y3pz9hprffgk8gyk54b60lvnac8g0c8hpga6sjjb1wsk998"; depends=[abind corpcor dplyr ggplot2 glasso IsingSampler lavaan magrittr Matrix matrixcalc mgcv mvtnorm numDeriv optimx pbapply pbv qgraph Rcpp RcppArmadillo tidyr ucminf VCA]; }; + psychotools = derive2 { name="psychotools"; version="0.5-1"; sha256="0nm5ngdkyskkj5akbqavdz8njsa8mr61kzknnn1kkdz6bn6zy6lq"; depends=[]; }; + psychotree = derive2 { name="psychotree"; version="0.15-3"; sha256="18lr9dlv5l5fw88n61ch251ddgy1cv6klcj7ba3fg109b86p3bgf"; depends=[Formula partykit psychotools]; }; + psychrolib = derive2 { name="psychrolib"; version="2.4.0"; sha256="0dz3lwds9lxwqdid88l6bkndk6lv1q7b0qzgf9imxmi8f8zhkrbh"; depends=[Rcpp]; }; psymonitor = derive2 { name="psymonitor"; version="0.0.2"; sha256="09288w2bk5jhnbyj516jqn5qb33yqqg5kqbg6ylqk7anlq2yg2sl"; depends=[doParallel foreach magrittr]; }; - psyosphere = derive2 { name="psyosphere"; version="0.1.4"; sha256="0z3qnbybpf5zk07zny2mq8ax8lr0m4n7gwp899km0lixb10z4ysf"; depends=[geosphere ggmap ggplot2 lubridate plyr rgdal RgoogleMaps SDMTools sp]; }; + psyosphere = derive2 { name="psyosphere"; version="0.1.5"; sha256="14xnni31p2dh4wfnr2cmr3ymz5phx4506cq2n7ymy4k1587w25g6"; depends=[geosphere ggmap ggplot2 Hmisc lubridate plyr rgdal RgoogleMaps sp]; }; psyphy = derive2 { name="psyphy"; version="0.1-9"; sha256="1ndc6sy662wj2qfx7r97crlqjd8fdkfvfy59qmf34bcbzbg33riz"; depends=[]; }; pterrace = derive2 { name="pterrace"; version="1.0"; sha256="15k5149jqjy20cck5121zsv2mk63amn5b8qgdlacivri9dpxjns1"; depends=[doParallel foreach plotly TDA viridis]; }; ptest = derive2 { name="ptest"; version="1.0-8"; sha256="1d30a23yknf7xgqj8adgr36pnh9dpffl1v5fq682f26fk3ss30qp"; depends=[quantreg]; }; ptinpoly = derive2 { name="ptinpoly"; version="2.4"; sha256="1jbj8z7lqg7w1mqdh230qjaydx2yb6ffgkc39k7dx8xl30g00i5b"; depends=[misc3d]; }; - ptmixed = derive2 { name="ptmixed"; version="0.4.2"; sha256="02cyifia87zqgxcg1an5aq73clvkk39lamb9cdvj41145kdnz9ph"; depends=[aod GLMMadaptive lme4 matrixcalc moments mvtnorm numDeriv tweeDEseq]; }; - pts2polys = derive2 { name="pts2polys"; version="0.1.1"; sha256="1pnh8ajh95c8xzfa4bvd2w41fi7h0jcg003rsji6xsasly3q34vr"; depends=[Rcpp]; }; + ptmixed = derive2 { name="ptmixed"; version="0.4.3"; sha256="0n62zrv4j7h9605izzpxjknhr495ir3yjlvzgmk9hil15r8n0w06"; depends=[aod GLMMadaptive lme4 matrixcalc moments mvtnorm numDeriv tweeDEseq]; }; + pts2polys = derive2 { name="pts2polys"; version="0.1.3"; sha256="0rmgryv0vds20npvaqvvwrhrx0grfcz9qwdy2w3bx945r0chhw39"; depends=[Rcpp]; }; ptstem = derive2 { name="ptstem"; version="0.0.4"; sha256="0dx677c7qh7rbalsys1n3xv4hjdhd6qypjd1mrggfwz1bd4vig4j"; depends=[dplyr hunspell magrittr rslp SnowballC stringr tidyr tokenizers]; }; ptsuite = derive2 { name="ptsuite"; version="1.0.0"; sha256="1df273p8v6zvhy2jj6imhjigwj77grx6sxqmg0sidxwqny5d1d9c"; depends=[Rcpp]; }; ptw = derive2 { name="ptw"; version="1.9-15"; sha256="0ikvzc5vfcs50jl5n49mhk39pcijyfdxd26adgs01h0b50zh1yi2"; depends=[nloptr]; }; ptwikiwords = derive2 { name="ptwikiwords"; version="0.0.3"; sha256="129dad1vy52sf97dqrkwa49vjhv2kvs4pmd5zvq8pxd51hqm6wy9"; depends=[]; }; ptycho = derive2 { name="ptycho"; version="1.1-4"; sha256="1llk3rpk0lf80vwvs23d6dqhgyic3a6sfjc393csj69hh01nrdvc"; depends=[coda plyr reshape2]; }; pubchunks = derive2 { name="pubchunks"; version="0.2.0"; sha256="119ihi6xi9k3p5lv2qkch2jc2fqmf8h0wi7mqh57asg7n6f0qb6r"; depends=[data_table rcrossref xml2]; }; - pubh = derive2 { name="pubh"; version="1.1.3"; sha256="0wr54x88ja4d0bpid1blz235q5kdlpyprha9nzrmwsr30s3c060n"; depends=[car dplyr emmeans Epi epiR epitools ggformula ggplot2 Hmisc lmtest magrittr sandwich sjlabelled sjPlot survival]; }; + pubh = derive2 { name="pubh"; version="1.1.6"; sha256="0788h08nmqxihymb8l46xwjs9j00vmxyim031p29392i8zbqkhc5"; depends=[car dplyr emmeans Epi epiR epitools finalfit ggformula ggplot2 Hmisc lmtest magrittr sandwich sjlabelled sjPlot survival]; }; publipha = derive2 { name="publipha"; version="0.1.1"; sha256="0ssmkz4bbrp5yvqb2da0i6shzm59ydw2sqkmqkid039782sibjch"; depends=[BH loo Rcpp RcppEigen rstan rstantools StanHeaders truncnorm]; }; pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.16"; sha256="1dcviy347lypbzwwz506d37wy5swla2vjgyqijwc37daic71bnih"; depends=[boot R2HTML RCurl XML]; }; pubtatordb = derive2 { name="pubtatordb"; version="0.1.4"; sha256="0i5azbf75bwxxzpsr5fc2hh22pbwix00hz9dcdpn5jgp2957f7wx"; depends=[assertthat DBI dplyr R_utils readr RSQLite]; }; @@ -12033,7 +12055,7 @@ in with self; { pvclass = derive2 { name="pvclass"; version="1.4"; sha256="1g6x75qz3xybq1xnik0hzi7mcs0gzzqd3f0iwfkzi5d1zcddnw13"; depends=[Matrix]; }; pvclust = derive2 { name="pvclust"; version="2.2-0"; sha256="0082icm54k2yq60k06qpr92a626k39j2jr0046lva4ylmhxqb4kq"; depends=[]; }; pvsR = derive2 { name="pvsR"; version="0.3"; sha256="1ijmqlcsc8z0aphdd3j37ci8yqsy50wnr2fwn7h8fxbyd12ax2nj"; depends=[httr nnet XML]; }; - pwr = derive2 { name="pwr"; version="1.2-2"; sha256="0r5g781lr677vp3zyhgmi7r68c87l8gd05l1s3ffnxgn5wf043sm"; depends=[]; }; + pwr = derive2 { name="pwr"; version="1.3-0"; sha256="1kfzy73v3z6ipc3kdfkcjrp4b4p5k54nwk796gqi36srm93hgc2v"; depends=[]; }; pwr2 = derive2 { name="pwr2"; version="1.0"; sha256="0zfv7z5yymw310r1sqm8ivsc2pv6dgk2k4b1axmm92gsaj53cn7p"; depends=[]; }; pwr2ppl = derive2 { name="pwr2ppl"; version="0.1.1"; sha256="1n34cmsnia6gskwqh5l1czi4cx8vi96nzs100am3vkcxx1xlq7ss"; depends=[afex car dplyr ez lavaan MASS MBESS nlme phia tidyr]; }; pwrAB = derive2 { name="pwrAB"; version="0.1.0"; sha256="0ifyw40m9gsijw3vm9qb8qk4yydmdixfdpdp45x2hk93j8v61jm1"; depends=[]; }; @@ -12044,7 +12066,7 @@ in with self; { pwt9 = derive2 { name="pwt9"; version="9.1-0"; sha256="0m2df89lali9945avcv4gdjpxch9in7vdd042nx0q8nv0alb4ijd"; depends=[]; }; pxR = derive2 { name="pxR"; version="0.42.2"; sha256="1q1xwsrs1ch1a1d1clz6sl7vnsyz5wjqivczk5n5d772y4w60bz5"; depends=[plyr reshape2 RJSONIO stringr]; }; pxweb = derive2 { name="pxweb"; version="0.9.1"; sha256="00xp7idhsirmpl970yxnxp6xn128jm5kwsmdwhys32wlbd9kzspc"; depends=[checkmate httr jsonlite]; }; - pyMTurkR = derive2 { name="pyMTurkR"; version="1.1"; sha256="0pvv8fgg40vv36mf3cc8ysrjj3gk9hnmzyvwix2ndxvc1nlzzahc"; depends=[curl reticulate XML]; }; + pyMTurkR = derive2 { name="pyMTurkR"; version="1.1.4"; sha256="1dv8v01gd79jvqr54rb7k9x8i7v279f82slbmpvsd5r0k9zg2bfq"; depends=[curl reticulate XML]; }; pycno = derive2 { name="pycno"; version="1.2"; sha256="0ha5css95xb98dq6qk98gnp1al32gy6w5fkz74255vs4hmkwfzw2"; depends=[maptools rgeos sp]; }; pyinit = derive2 { name="pyinit"; version="1.0.3"; sha256="0sj7r52a53x57ff8b34s6p2y638b85fin0cxrndhpsk392sds0ki"; depends=[robustbase]; }; pyramid = derive2 { name="pyramid"; version="1.5"; sha256="0lakn9knmhqvhrp98sc3hhwd4bilpplxbr5j9bv8w6li0qd3d04a"; depends=[]; }; @@ -12053,12 +12075,14 @@ in with self; { qCBA = derive2 { name="qCBA"; version="0.4"; sha256="1230sh9riazx1shhgbkkxfrks7klypj2x1vc173q09hq8bkam2ha"; depends=[arc arules rJava]; }; qGaussian = derive2 { name="qGaussian"; version="0.1.8"; sha256="02xy35xg4swr1ldnsbywnz2h0ga1pbsivnj0aqmpll7kvwl9qz4c"; depends=[Rcpp robustbase zipfR]; }; qLearn = derive2 { name="qLearn"; version="1.0"; sha256="1ilxmgazm8gjz8c1hhbp4fccibnvnalxrag8b0rn081zsqmhf094"; depends=[]; }; + qMRI = derive2 { name="qMRI"; version="1.2"; sha256="10x59g8awxjib5j5mc1yd5wsibk3z6ki6zifxsg8azl0zblxbscf"; depends=[adimpro aws awsMethods oro_nifti stringr]; }; qVarSel = derive2 { name="qVarSel"; version="1.0"; sha256="13x2hnqjsm0ifzmqkkl9ilhykrh80q04lhlkkp06hkysmh5w9rkx"; depends=[lpSolveAPI Rcpp]; }; qad = derive2 { name="qad"; version="0.1.1"; sha256="11v291swfl4llgzfffm786xqp9cn82vl8xlqjlma5wah7ig73rgh"; depends=[copula data_table doParallel foreach ggplot2 plyr viridis]; }; qap = derive2 { name="qap"; version="0.1-1"; sha256="0d2d1ni1camixyi45lfy00f4pn3p063k7bsi8gj5scp6n15mdgb0"; depends=[]; }; qat = derive2 { name="qat"; version="0.74"; sha256="04n1jnbkf9dzafjh1n5d4q9p7hvyhnr63nmgl51jqxcf3nan5rlx"; depends=[boot fields gdata gplots moments ncdf4 XML]; }; qboxplot = derive2 { name="qboxplot"; version="0.2"; sha256="07f05n7zxgwyxg2r5fz691ra64m218w9v874xfzjx6671c40y1q2"; depends=[]; }; qcQpcr = derive2 { name="qcQpcr"; version="1.5"; sha256="1298zla8z5w9z4idc07v3ca9rc1afx853y7iz3jmqnqnv8mr0s48"; depends=[ggplot2]; }; + qcapower = derive2 { name="qcapower"; version="0.1.0"; sha256="14vszidjvyi8namwv5k0hpgdw1dpns5ilvxfwa920ivdg35709ki"; depends=[devtools ggforce ggplot2]; }; qcc = derive2 { name="qcc"; version="2.7"; sha256="0lc26w7p3d023lfr8v6v75m2vwqg9vi9pdipap19l4vbdq29l4zz"; depends=[MASS]; }; qccrs = derive2 { name="qccrs"; version="0.1.0"; sha256="0lwrmf2809zzdj5f25bb1psh57ibyw90ra41fy2i9vjmgph9wgiq"; depends=[dplyr magrittr purrr tibble]; }; qcr = derive2 { name="qcr"; version="1.0"; sha256="1251naica44kccmikyzdi3ncxfmvyqbc4qspfqnc0w54cqpsy5rw"; depends=[fda_usc MASS mvtnorm qcc qualityTools]; }; @@ -12069,21 +12093,21 @@ in with self; { qdapTools = derive2 { name="qdapTools"; version="1.3.3"; sha256="0a28jn57d2fas3009cm10z07fq77ql3ffcrhcxsiimb57179wj0n"; depends=[chron data_table RCurl XML]; }; qdm = derive2 { name="qdm"; version="0.1-0"; sha256="0cfxyy8s5zfb7867f9xv9scq9blq2qnw68x66m7y7nqlrrff5xdr"; depends=[]; }; qfasar = derive2 { name="qfasar"; version="1.2.0"; sha256="067wnwwz8s0yxig13wrjq37w62kf8p5pa8my5lfpc1ik1b7iysby"; depends=[Rsolnp]; }; - qgam = derive2 { name="qgam"; version="1.3.0"; sha256="0i0irz2jqi73d97zyy8xz2yi95y93kw3sr9xf4hmrjdd4k15l0wk"; depends=[doParallel mgcv plyr shiny]; }; - qgcomp = derive2 { name="qgcomp"; version="2.0.0"; sha256="0q2mz5yynri26yfscicw344bjar7ygjmmy7hspjvqgg10mj8sla7"; depends=[arm future future_apply ggplot2 gridExtra pscl survival]; }; + qgam = derive2 { name="qgam"; version="1.3.2"; sha256="0lks2cj0p7irp1i01756v1l7i26d7alax1fbkc20qd6wpz840fi7"; depends=[doParallel mgcv plyr shiny]; }; + qgcomp = derive2 { name="qgcomp"; version="2.2.2"; sha256="0dszh56drh9h4gc4vb31749hjgl9k3yvj8x10d2nkr8ba29ng4x2"; depends=[arm future future_apply generics ggplot2 gridExtra pscl survival tibble]; }; qgg = derive2 { name="qgg"; version="1.0.2"; sha256="1bxm6gg52ja8n2b54i8zhd4wp3711dq94ch7sr2lqrr6kd7w033s"; depends=[data_table MASS MCMCpack statmod]; }; - qgraph = derive2 { name="qgraph"; version="1.6.4"; sha256="1glg814h7fwl1jfm6dw1d9i80bilmj5jcjjrfln15byrdh4mm1j3"; depends=[abind BDgraph colorspace corpcor d3Network dplyr fdrtool ggm ggplot2 ggraph glasso gtools Hmisc huge igraph jpeg lavaan Matrix pbapply plyr png psych Rcpp reshape2 tidygraph]; }; + qgraph = derive2 { name="qgraph"; version="1.6.5"; sha256="0pwys9irxvp0ap158drplyypkplbmwqinv0fmlsblk7q875cr592"; depends=[abind BDgraph colorspace corpcor d3Network dplyr fdrtool ggplot2 ggraph glasso gtools Hmisc huge igraph jpeg lavaan Matrix pbapply plyr png psych Rcpp reshape2 tidygraph]; }; qgtools = derive2 { name="qgtools"; version="2.0"; sha256="1gj7vbam53yr2rnxzfxng1p107bjcyjmyj47cxyzaiv19pznkbmw"; depends=[]; }; qha = derive2 { name="qha"; version="0.0.8"; sha256="0sdf6g6884wn73i237xkwszg2mq8xddhvyy225qzpplh5za4pnhl"; depends=[ade4 FactoClass FactoMineR]; }; qicharts = derive2 { name="qicharts"; version="0.5.5"; sha256="0bl1f64b5n8q9jhzh3rqfyh9613qiy9mhcy2xsn16jyrj4hmj0jd"; depends=[ggplot2 lattice latticeExtra scales]; }; - qicharts2 = derive2 { name="qicharts2"; version="0.6.0"; sha256="0310xczb8zzl8xl0l2fn1mw58cbkgs0xpsp3q061psv1achapxbr"; depends=[dplyr ggplot2 scales]; }; + qicharts2 = derive2 { name="qicharts2"; version="0.6.1"; sha256="14s8fji9hmsi3675n6nsy0mh1myj54bm18fssax2h0s96742lz79"; depends=[ggplot2 scales]; }; qif = derive2 { name="qif"; version="1.5"; sha256="12azs7c0anpd71d5663y1jrhirry6cr78wislp4fk64hmsbx7sx4"; depends=[MASS]; }; qiitr = derive2 { name="qiitr"; version="0.1.0"; sha256="1p0mcwgzvbib20l05wrnshkqx99vwr69dgy15dfwp75skyy5l797"; depends=[httr jsonlite purrr rstudioapi]; }; qkerntool = derive2 { name="qkerntool"; version="1.19"; sha256="14inry2hqvkmy0y2y3cl75ri4vri0hirv98gw2rymny69lia5x0s"; depends=[class]; }; qlcData = derive2 { name="qlcData"; version="0.2.1"; sha256="0n1r7462zmyzkyi7mp3hf7pn7bgw1m1zs9flm3n199kjm8f6yyzy"; depends=[ape data_tree docopt phytools shiny stringi yaml]; }; qlcMatrix = derive2 { name="qlcMatrix"; version="0.9.7"; sha256="0iqkcvvy8rxlk0s83sjq57dd6fadb18p5z31lzy0gnzv1hsy1x8y"; depends=[docopt Matrix slam sparsesvd]; }; qmap = derive2 { name="qmap"; version="1.0-4"; sha256="02xvq1mw83gln7phacbi3vhkvb100crggbldv13mhwq3wjnmg5k2"; depends=[fitdistrplus]; }; - qmethod = derive2 { name="qmethod"; version="1.5.4"; sha256="1c64b7jy9llz5dhfnk75yamjva043213gd08dsr27pyjkmbyqms1"; depends=[digest GPArotation knitr psych xtable]; }; + qmethod = derive2 { name="qmethod"; version="1.5.5"; sha256="1s787big5f1m91n9s7yhxpsfx0161l7pyihlvfp9406k8qxs3jnl"; depends=[digest GPArotation knitr psych xtable]; }; qmix = derive2 { name="qmix"; version="0.1.2.0"; sha256="172lhvj7adphxq9gws2i9lysc9bj1wpk60f4hf2h5sisnli15v0x"; depends=[BH Formula Rcpp RcppEigen rstan StanHeaders]; }; qmrparser = derive2 { name="qmrparser"; version="0.1.5"; sha256="0sl9n42j0dx9jqz5vv029ra6dyrg9v7mvdlya8ps3vyd6fjhwh0z"; depends=[]; }; qoma_smuggler = derive2 { name="qoma.smuggler"; version="0.0.1"; sha256="03p9i0kr6i3adpb9lcszcmdr9p26nfy7f8hw2sbydazglaw4hscr"; depends=[lubridate rhli tibble]; }; @@ -12091,15 +12115,14 @@ in with self; { qpdf = derive2 { name="qpdf"; version="1.1"; sha256="03lnfncw8qd1fwfyqh1mjvnsjr3b63wxbah0wp5g7z7gba90dwbi"; depends=[askpass curl Rcpp]; }; qqid = derive2 { name="qqid"; version="1.0.3"; sha256="1j2s5zilz97x4kl10g85qr3rxg022p9i601r6gvkaa57xcx6smw1"; depends=[qrandom]; }; qqman = derive2 { name="qqman"; version="0.1.4"; sha256="1v9s9ag1hfb47py87wb2nad4mbsfx35832hdmrh5kxrb2f11zl1s"; depends=[calibrate]; }; - qqplotr = derive2 { name="qqplotr"; version="0.0.3"; sha256="0qijdgma702ryi0q2ii2sa04jpz12i8c7xnh9a9zngi9n630a0f2"; depends=[dplyr ggplot2 knitr MASS purrr rmarkdown robustbase]; }; - qqtest = derive2 { name="qqtest"; version="1.1.1"; sha256="08vfpbrgvyhv1w0gqmys9zkhfxh85sk74ig5fn12ma2p87zv7r5l"; depends=[robust]; }; + qqplotr = derive2 { name="qqplotr"; version="0.0.4"; sha256="1zy7mlnll0infr2las5c28vi5da04rm869dpccwcws1467mhys3k"; depends=[dplyr ggplot2 knitr MASS robustbase]; }; + qqtest = derive2 { name="qqtest"; version="1.2.0"; sha256="1v0qbbp2dpqflpg7yif7hipwdbz27isfyfwcia1ln7z0nnvkjm8c"; depends=[]; }; qqvases = derive2 { name="qqvases"; version="1.0.0"; sha256="1fli4v1slmnwcmzmmfw84sa4mx3xzv3im1q0plb8811sbsgmwdvl"; depends=[shiny shinythemes]; }; qrLMM = derive2 { name="qrLMM"; version="2.0"; sha256="0ci4679kfif1sk4009v89yfm5p6nyk7nhvikgd00rhrbqi9qaqy4"; depends=[ald lqr mvtnorm psych quantreg]; }; qrNLMM = derive2 { name="qrNLMM"; version="2.0"; sha256="0j69zhs1v4546xrkwra9c2q3kmhf593vi05yjn3b3s5nzh2k0i1x"; depends=[ald lqr mvtnorm psych quantreg]; }; qrage = derive2 { name="qrage"; version="1.0"; sha256="00j74bnkcpp0h8v44jwzj67q9aaw47ajc2fvgr6dckj9rymydinl"; depends=[htmlwidgets]; }; qrandom = derive2 { name="qrandom"; version="1.2.2"; sha256="1s0frb3qjaraigx79g0sm60dj216jrmp1lgzcvjk3rh7xdjhjrkn"; depends=[curl jsonlite Rmpfr]; }; - qrcm = derive2 { name="qrcm"; version="2.1"; sha256="0wp6ynckh66gxi569wbvn5szwih4g0c21zrrpz3zfavhqwk7srgf"; depends=[pch survival]; }; - qrcmNP = derive2 { name="qrcmNP"; version="0.1.2"; sha256="0psgnz2fdj530wjj14pv5x2889yzphnlsg10lry9i6dvmxd8m47k"; depends=[qrcm survival]; }; + qrcm = derive2 { name="qrcm"; version="2.2"; sha256="04cd78vqqp7pprrfpcza03g4pcffgl42qsax1285fbmxjqhb3yks"; depends=[pch survival]; }; qrcode = derive2 { name="qrcode"; version="0.1.1"; sha256="12j0db8vidlgkp0dcjyrw5mhhvazl7v7gpn9wsf2m0qnz1rm4igq"; depends=[R_utils stringr]; }; qrencoder = derive2 { name="qrencoder"; version="0.1.0"; sha256="1lg60lg2fiqdw0m228i8pln2p0kqp9f21qmrx6r6rwxifvwlfhv8"; depends=[base64enc png raster Rcpp]; }; qrjoint = derive2 { name="qrjoint"; version="2.0-3"; sha256="1ymnq8mbvxfdi63f4554mjlix5n864v2nask27pkf3yfxmkr346k"; depends=[coda kernlab Matrix quantreg]; }; @@ -12108,13 +12131,12 @@ in with self; { qrmtools = derive2 { name="qrmtools"; version="0.0-12"; sha256="1gbnc8cl0iv5snkrz5vrg3k6c5zz74amrb6yxwnlhh69yh63zxhi"; depends=[ADGofTest lattice Quandl quantmod rugarch xts zoo]; }; qrng = derive2 { name="qrng"; version="0.0-7"; sha256="1dw1qqajxavlnfyh6xn58069fpfza28x1xjzd3diqlcxxlb4hjaf"; depends=[copula randtoolbox]; }; qrnn = derive2 { name="qrnn"; version="2.0.5"; sha256="0ligz67kbfg5cmvacnb7y0ms1v0c7mbvbcfsxyfiz543ppl3xn1v"; depends=[]; }; - qrsvm = derive2 { name="qrsvm"; version="0.2.1"; sha256="0qpj3c8qwrwr2asvp921av0mbdba1ayz0pdq4a52i1waqng4fgis"; depends=[doParallel foreach kernlab Matrix quadprog]; }; - qs = derive2 { name="qs"; version="0.20.2"; sha256="12iqfa5rmcvw8dhprg4w8xvk2qd5796rmdsl9bsj59ijzr7zwg82"; depends=[RApiSerialize Rcpp]; }; + qs = derive2 { name="qs"; version="0.21.2"; sha256="1i4xrm9vz8ffl4mbw1qmgwkcm3j6ajw25ilj08n87ghy798pyab3"; depends=[RApiSerialize Rcpp]; }; qsort = derive2 { name="qsort"; version="0.2.3"; sha256="1xvp29dijfa2207wyw3z09rmffn61fngfy0f00qjk284n1jnnvrg"; depends=[cowplot ggplot2 gridExtra purrr]; }; qsub = derive2 { name="qsub"; version="1.1.0"; sha256="0i52bibc782k09f5hp3ic9ll14fsrwjnkdxlb0mhkjvsqm7m5hc5"; depends=[dplyr glue pbapply processx purrr random readr ssh stringr tidyr]; }; qtbase = derive2 { name="qtbase"; version="1.0.14"; sha256="1pcgjycq61x9h52sqr6fz83qjnlpbawvpavnn9hyw2b7jlv3nwfd"; depends=[]; }; qte = derive2 { name="qte"; version="1.3.0"; sha256="0x65n2qyq1py0nrachxkqd273mywkw433ai5x6ni3ak4ckbp3g66"; depends=[BMisc formula_tools ggplot2 Hmisc knitr msm pbapply quantreg texreg]; }; - qtl = derive2 { name="qtl"; version="1.44-9"; sha256="03lmvydln8b7666b6w46qbryhf83vsd11d4y2v95rfgvqgq66l1i"; depends=[]; }; + qtl = derive2 { name="qtl"; version="1.46-2"; sha256="0rbwcnvyy96gq1dsgpxx03pv423qya26h6ws5y0blj3blfdmj83a"; depends=[]; }; qtl2pleio = derive2 { name="qtl2pleio"; version="1.2.3"; sha256="0ihlp6glsw4pk97vpqlcbd6zmg0qww3i19c1b76vx1wkazjg6pd8"; depends=[dplyr gemma2 ggplot2 magrittr MASS Matrix Rcpp RcppEigen rlang stringr testthat tibble]; }; qtlDesign = derive2 { name="qtlDesign"; version="0.941"; sha256="138yi85i5xiaqrns4v2hw46b731bdgnb301wg2h4cfrxvrw4l0d5"; depends=[]; }; qtlbook = derive2 { name="qtlbook"; version="0.18-8"; sha256="1c849xy2ki7niddajv5wnsm0zdp5381w8zm9lc8rvkdbs2v6rhf4"; depends=[]; }; @@ -12136,22 +12158,23 @@ in with self; { qualityTools = derive2 { name="qualityTools"; version="1.55"; sha256="1c2p78dhwqvzb2k01dvwb41a6hlr2iwpw6fv91036x30rphjzb88"; depends=[MASS Rsolnp]; }; qualmap = derive2 { name="qualmap"; version="0.1.1"; sha256="1z085zyqxnizpx4y1891shhijs2a9gg5ap800ryvfxncg6gk35wa"; depends=[dplyr glue leaflet purrr rlang sf]; }; qualpalr = derive2 { name="qualpalr"; version="0.4.3"; sha256="1hlssqj2129796d00gnip3ih5b705qasw0hkj25xfz7xak0vdbkm"; depends=[assertthat randtoolbox Rcpp RcppArmadillo RcppParallel]; }; - qualtRics = derive2 { name="qualtRics"; version="3.1.1"; sha256="092f8d59g5b5619q6v4vkpjw8za5rrmhv805xg95m3z0xcscg1rl"; depends=[assertthat dplyr httr jsonlite purrr readr rlang sjlabelled stringr tibble yaml]; }; + qualtRics = derive2 { name="qualtRics"; version="3.1.2"; sha256="18pl7ni5m0xb1rkpw118cxcbhbwqqvq4cm4wx1jddknn4kx7cjbx"; depends=[assertthat dplyr httr jsonlite purrr readr rlang sjlabelled stringr tibble]; }; qualvar = derive2 { name="qualvar"; version="0.2.0"; sha256="1c7b7lcyq2l46sslk185r6xfh5fb35z9qihrhnh294sw1k52bffa"; depends=[]; }; qualypsoss = derive2 { name="qualypsoss"; version="1.0.0"; sha256="1pvf9b9yw8317wnh1x1jkmwl4cl0r9q7npfw0xzgbs8mfpl9j2ah"; depends=[doParallel foreach MASS mvtnorm]; }; quantable = derive2 { name="quantable"; version="0.3.6"; sha256="15q4phc2j7aihl8f4qzpdwxcvshq2cfzkfcxc8k4qypsxk9a00sb"; depends=[caret dplyr e1071 ggplot2 ggrepel gplots Matrix plyr pROC RColorBrewer readr reshape2 rlang scales stringr tibble tidyr]; }; - quanteda = derive2 { name="quanteda"; version="1.5.2"; sha256="0iv25rpx5cl9ansazjs0qb97pniajrxf4mqsnb5q98y2hil9ipd3"; depends=[data_table extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network proxyC Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi xml2 yaml]; }; + quanteda = derive2 { name="quanteda"; version="2.0.1"; sha256="0pym6vdzqbkyj87m3pla229092xvvx4j830x67qflxzzdmc9dzhz"; depends=[data_table extrafont fastmatch ggplot2 ggrepel jsonlite magrittr Matrix network proxyC Rcpp RcppArmadillo RcppParallel sna SnowballC stopwords stringi xml2 yaml]; }; + quanteda_textmodels = derive2 { name="quanteda.textmodels"; version="0.9.1"; sha256="04c43hk6yx06m11s01aw0sqjd2yip7l7wzlbif600hvwxgs74knn"; depends=[ggplot2 LiblineaR Matrix quanteda Rcpp RcppArmadillo RcppParallel RSpectra RSSL SparseM stringi]; }; quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; }; quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; }; quantities = derive2 { name="quantities"; version="0.1.3"; sha256="0crcwcr53bpqj07q5hvqkpq1sg9ikwz3nig2ifshqq5g2a3m57qs"; depends=[errors Rcpp units]; }; - quantmod = derive2 { name="quantmod"; version="0.4-15"; sha256="0lyzaf5ypk93v6zj9gdghy05cc7cxgn9yasv1apx5r6qsjcfgwky"; depends=[curl TTR xts zoo]; }; + quantkriging = derive2 { name="quantkriging"; version="0.1.0"; sha256="0v6kckgzhgsn3158sc06xszdhmk8sfny10j1qyppxsl2hk89n8jf"; depends=[ggplot2 hetGP Matrix reshape2]; }; + quantmod = derive2 { name="quantmod"; version="0.4-16"; sha256="12l5br8abr1yagxqjnjvqzp79sqsv5vx56cxs37gk73r474f4vc2"; depends=[curl TTR xts zoo]; }; quantoptr = derive2 { name="quantoptr"; version="0.1.3"; sha256="0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3"; depends=[quantreg Rdpack rgenoud stringr]; }; quantreg = derive2 { name="quantreg"; version="5.54"; sha256="19nh79qrkb75q348nk148l8wqjwnq5jgq29wpzqym5cfv1kjqfvh"; depends=[Matrix MatrixModels SparseM]; }; quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; }; quantregForest = derive2 { name="quantregForest"; version="1.3-7"; sha256="0lk7r02i6zpx9sdl2rp0r7fc3a84s8qhg49nh2x7k3vxwa095pjz"; depends=[randomForest RColorBrewer]; }; quantregGrowth = derive2 { name="quantregGrowth"; version="0.4-3"; sha256="0q2yk51hcn7jnvh14nxa7szfj4pr9grh5rdfwazaziilbwqdmw4f"; depends=[quantreg]; }; quantregRanger = derive2 { name="quantregRanger"; version="1.0"; sha256="1a9q2prr790bpw6s0y5ni5ppd3vqkjr0v4nqp6ywcj5n3sk69pvx"; depends=[ranger Rcpp]; }; - quantspec = derive2 { name="quantspec"; version="1.2-1"; sha256="0kvwifdwy3big0lls5h3wcb48v3jvlfp1l0zjd07jnvj43zj3ysd"; depends=[abind quantreg Rcpp snowfall zoo]; }; quarrint = derive2 { name="quarrint"; version="1.0.0"; sha256="13fdmmrgn23xd9vpywmcl7pf729gmcxjfl1wxs30axsbp4h1s6rk"; depends=[neuralnet]; }; queryparser = derive2 { name="queryparser"; version="0.2.0"; sha256="1fsp64rm4jch2jjw7czw9qmwb4f3s46avbf3z3gpvcfdq4aw65kb"; depends=[]; }; questionr = derive2 { name="questionr"; version="0.7.0"; sha256="1cschww3g2jhrfh87bxcaaig84yr0zcj0virmpx033yal606hmn4"; depends=[classInt highr htmltools labelled miniUI rstudioapi shiny]; }; @@ -12171,17 +12194,15 @@ in with self; { quokar = derive2 { name="quokar"; version="0.1.0"; sha256="1qnl3x1aa665xpyb3ac07xrnnjdwbmj645p103144k5is5b8likc"; depends=[ald ALDqr bayesQR dplyr ggplot2 GIGrvg gridExtra knitr magrittr MCMCpack purrr quantreg robustbase tidyr]; }; quotedargs = derive2 { name="quotedargs"; version="0.1.3"; sha256="11cswg9bmddsl1axxcdz11flq46p1zkpv022526f2vgl4qsprwbm"; depends=[]; }; qut = derive2 { name="qut"; version="2.1"; sha256="1wkk4c4f10a1whrspr5yalp7flcxckzxlx187ymmpnz7qcncz619"; depends=[flare glmnet lars Matrix]; }; - qvcalc = derive2 { name="qvcalc"; version="1.0.1"; sha256="1wr5zivnfwscrzhw9myc5llpac0xjkz51s6hravjhflmp8s8lm7k"; depends=[]; }; + qvcalc = derive2 { name="qvcalc"; version="1.0.2"; sha256="0banzv78kb53ybfbh1hmgx7kxvpbbdxzg4dsn7vrwhmxs72srkch"; depends=[]; }; qwraps2 = derive2 { name="qwraps2"; version="0.4.2"; sha256="14h9xwv6x5lci17hg048a6n0cp3d2rif4v0g7dr05w504h157kw9"; depends=[dplyr ggplot2 knitr magrittr Rcpp RcppArmadillo rlang tidyr]; }; r_blip = derive2 { name="r.blip"; version="1.1"; sha256="1p33g6i6fq9c27d5ix9nd8prv90i4hrf91x34bldlw8041sjqxm0"; depends=[bnlearn foreign]; }; - r_jive = derive2 { name="r.jive"; version="2.1"; sha256="0l0bhhp6bdc84pzxi7gnsxx3scycw0zahrnc496wx3j43np9hlsg"; depends=[abind gplots SpatioTemporal]; }; r2d2 = derive2 { name="r2d2"; version="1.0-0"; sha256="1zl0b36kx49ymfks8rm33hh0z460y3cz6189zqaf0kblg3a32nsi"; depends=[KernSmooth MASS sp]; }; r2d3 = derive2 { name="r2d3"; version="0.2.3"; sha256="0v612mbzdjr8cq1ffall9hagbwxfv7fh963x8f0w5r84v1m3y2bl"; depends=[htmltools htmlwidgets jsonlite rstudioapi]; }; r2dRue = derive2 { name="r2dRue"; version="1.0.4"; sha256="1apdq7zj5fhs349wm9g6y06nn33x24pg3gdp4z1frd18qlacf8z5"; depends=[matrixStats rgdal sp]; }; r2glmm = derive2 { name="r2glmm"; version="0.1.2"; sha256="0iim92blpa59vgz97c2pi05yhbjjmaffdbkbmk5kplfb2vmazgiy"; depends=[afex data_table dplyr ggplot2 gridExtra lmerTest MASS Matrix mgcv pbkrtest]; }; - r2pmml = derive2 { name="r2pmml"; version="0.23.0"; sha256="1md7fzx7yc6b3plflcq4c109v2plhvb1a6dg628bhyiicjs1s83c"; depends=[]; }; - r2stl = derive2 { name="r2stl"; version="1.0.0"; sha256="18lvnxr40cm450s8qh09c3cnkl1hg83jhmv1gzsv6nkjrq4mj5wh"; depends=[]; }; - r2sundials = derive2 { name="r2sundials"; version="5.0.0-4"; sha256="1zwwrphix4smvxmb93ni1lb1vz0j9r3j3fr3n0b29y8z6lvk1q9k"; depends=[Rcpp RcppArmadillo rmumps]; }; + r2pmml = derive2 { name="r2pmml"; version="0.24.0"; sha256="0fl2kh1b7rvghschadsdp12za0r16xpak29f0w7dh38i5sw5scrk"; depends=[]; }; + r2sundials = derive2 { name="r2sundials"; version="5.0.0-7"; sha256="11l8z7h0gm71yqns2blrd26p084gcdc4x1xwv0knp8830xqjdsmw"; depends=[Rcpp RcppArmadillo rmumps]; }; r4lineups = derive2 { name="r4lineups"; version="0.1.1"; sha256="1p0dnrp21zx1l9lqx01jnq54d5ppb8siibv47i4gsp7c7db9ymxc"; depends=[boot dplyr ggplot2 ggrepel here magick magrittr pROC psych purrr]; }; r4ss = derive2 { name="r4ss"; version="1.36.1"; sha256="03xin7avdbg5ayrcdbw5rx9sh6ingjq2kv3405h01vqf1jhkfsxk"; depends=[coda corpcor gdata gplots gtools kableExtra pso truncnorm]; }; r511 = derive2 { name="r511"; version="0.1.1"; sha256="1njsnjf0746cv6x7fznq4cg556fczqcfawwb869r3w9zv0zj1iy9"; depends=[assertthat dplyr httr tibble xml2]; }; @@ -12198,19 +12219,18 @@ in with self; { rCMA = derive2 { name="rCMA"; version="1.1"; sha256="0dswshg80hbgcib5x9w791sh71q5s4435q8sm9dh170v4ngbax0w"; depends=[]; }; rCRM = derive2 { name="rCRM"; version="0.1"; sha256="01xxkrwd0iwhmq8dshgbn84qi6kky757y01alqrk0pkq2n8ghms4"; depends=[Rcpp RcppEigen]; }; rCUR = derive2 { name="rCUR"; version="1.3"; sha256="1f38xbc5n91k2y88cg0sv1z2p4g5vl7v2k1024f42f7526g2p2lx"; depends=[lattice MASS Matrix]; }; - rCarto = derive2 { name="rCarto"; version="0.8"; sha256="08813l4xfahjyn0jv48q8f6sy402n78dqsg01192pxl2dfc2i9ry"; depends=[classInt maptools RColorBrewer]; }; rChoiceDialogs = derive2 { name="rChoiceDialogs"; version="1.0.6"; sha256="0lp8amdalirpsba44aa3r31xnhmi36qb9qf8f8gdxxbarpgprsbi"; depends=[rJava]; }; rClinicalCodes = derive2 { name="rClinicalCodes"; version="1.0.1"; sha256="1p4p8r2n0k8h9xdzbngb95rshjp3376f5lsx228biqmswhpkhvlf"; depends=[RCurl rjson stringr tm XML]; }; - rDEA = derive2 { name="rDEA"; version="1.2-5"; sha256="1wsi2dkq9izvbhdqmd4qk8i277r1j38dk59fcmnxnwqvk6ar6nrb"; depends=[maxLik slam truncnorm truncreg]; }; + rDEA = derive2 { name="rDEA"; version="1.2-6"; sha256="0045crn7azsy3ggzr28vw5jd4f5aw5nj16cjnjxy2md3skfbc3zw"; depends=[maxLik slam truncnorm truncreg]; }; rDNAse = derive2 { name="rDNAse"; version="1.1-1"; sha256="0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk"; depends=[]; }; rDecode = derive2 { name="rDecode"; version="0.1.0"; sha256="1d0rrhycw9anhvx6czz7axkzhzqprdgi9sqfglmc962zf1x3hmn2"; depends=[]; }; rDotNet = derive2 { name="rDotNet"; version="0.9.1"; sha256="18cd5373pdfi1x958llb4cgjqdi1fb7h7m5nkdwcd4xw9hxhinzd"; depends=[Rcpp testthat]; }; + rEDM = derive2 { name="rEDM"; version="1.2.3"; sha256="1zz7rn57afax2hcffchzbkn0z6sbmbyhz6s6qbj5k92b48b1xdxb"; depends=[Rcpp RcppEigen]; }; rEMM = derive2 { name="rEMM"; version="1.0-11"; sha256="0ynjn10gcmxs8qnh6idb34ppmki91l8sl720x70xkzcqpahy0nic"; depends=[cluster clusterGeneration igraph MASS proxy]; }; rENA = derive2 { name="rENA"; version="0.2.0.1"; sha256="0sljnrhc710xbcdbsjx1rqrivbklgcnh7l4nqpnxdknvrxz6ky5y"; depends=[data_table doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo scales]; }; rERR = derive2 { name="rERR"; version="0.1"; sha256="1ymf0v3r2sv9m72c19csk38fy5kmld3i18jh06rir5kxkb5l245p"; depends=[dplyr ggplot2 numDeriv plyr reshape2 survival]; }; rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; }; rFIA = derive2 { name="rFIA"; version="0.2.0"; sha256="092h380z1rjwyf3s070icpcw10xnsjk6hk3phpbl7kxhx215bdjb"; depends=[bit64 data_table dplyr gganimate ggplot2 progress sf sp stringr tidyr]; }; - rFSA = derive2 { name="rFSA"; version="0.9.1"; sha256="14qpxmzy4vy1fydn8yqh1001mqrgv1i67ai42w61dkk0d4m75z60"; depends=[hashmap tibble]; }; rFerns = derive2 { name="rFerns"; version="3.0.0"; sha256="0z12201y1b9d3rd02k4y64hpnlrgkg7pi1jpzsh1br4pchdf7rrm"; depends=[]; }; rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; }; rGoodData = derive2 { name="rGoodData"; version="0.1.1"; sha256="092sgy6y3dkyr32hrir4jvjwh7n6gfvv9z7i631fipg59255g0zy"; depends=[data_table httr jsonlite]; }; @@ -12221,7 +12241,7 @@ in with self; { rIntervalTree = derive2 { name="rIntervalTree"; version="0.1.0"; sha256="0xd6wcra4zvphfgnz1rnnslx96p840zlgms367370xm4hyg6d37x"; depends=[]; }; rIsing = derive2 { name="rIsing"; version="0.1.0"; sha256="1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck"; depends=[data_table Rcpp RcppEigen]; }; rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-10"; sha256="0a00s10yp22fkvk67dkq43sbphcqla65x9j4qpv076bmdchn7arw"; depends=[chopsticks rJava]; }; - rJST = derive2 { name="rJST"; version="1.1"; sha256="1a3rpj66sncawwa0hi0w6066h188hl5ssdqqgn1jnn4l7bax156j"; depends=[magrittr quanteda Rcpp RcppArmadillo RcppProgress reshape2 SnowballC]; }; + rJST = derive2 { name="rJST"; version="1.3"; sha256="0l8znqvg4qiygv6mxwff1ipanzxvcdn54m879sk8z7zn3x5sg6iw"; depends=[magrittr quanteda Rcpp RcppArmadillo RcppProgress reshape2 SnowballC]; }; rJava = derive2 { name="rJava"; version="0.9-11"; sha256="0s9cjy1wh7snmbqwznh8f1r4ipylr7mgda4a979z963a8lqy32n2"; depends=[]; }; rJython = derive2 { name="rJython"; version="0.0-4"; sha256="13fpcw37cca738v9idqgi3gv9avfkfwfacxj54p2c4wyg46ghnah"; depends=[rJava rjson]; }; rKIN = derive2 { name="rKIN"; version="0.1"; sha256="1j6fdi5h869q4d1hq6ha6qyhisa0zk2qmhjrc4ahl9991d680dyn"; depends=[ggplot2 maptools MASS rgeos sp]; }; @@ -12232,10 +12252,10 @@ in with self; { rLindo = derive2 { name="rLindo"; version="8.0.1"; sha256="05qyc4wvpjgw8jxmwn2nwybi695fjn0cdilkprwmjg07c82f0q5n"; depends=[]; }; rMEA = derive2 { name="rMEA"; version="1.1.0"; sha256="1aarnik0qjxg6h55xpskx1dwkp78nfdyrwpy9r6ffyxhz9jbplnj"; depends=[]; }; rMR = derive2 { name="rMR"; version="1.1.0"; sha256="0da1hclfnnlkp9by6zf2p079643p8nimplr9p3ipbjdy739j344z"; depends=[biglm]; }; - rMVP = derive2 { name="rMVP"; version="0.99.17"; sha256="1ddnvpi5m3z52z0prcsi9bd2cp2axgl7nry50rmgxjfv7nal61bl"; depends=[BH bigmemory MASS Rcpp RcppArmadillo RcppEigen RcppProgress]; }; + rModeling = derive2 { name="rModeling"; version="0.0.3"; sha256="0xrjxayp59f31wwcqqkzs5my2j2lpbv1f4pp709fmqxz02vbdzhv"; depends=[caret e1071 MASS]; }; rMouse = derive2 { name="rMouse"; version="0.1"; sha256="0pzxasap5kwxqq36mb4zi139jllsl4vk06dw2pv9xnwdxiszr3gp"; depends=[rJava]; }; rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; }; - rNOMADS = derive2 { name="rNOMADS"; version="2.4.1"; sha256="0qag0riwkrzgybwfbhpkapjcf7ccqrqa4j8zqh3xx0548k8mm37l"; depends=[fields GEOmap MBA RCurl rvest stringr uuid XML]; }; + rNOMADS = derive2 { name="rNOMADS"; version="2.4.2"; sha256="0mir7b2693s27gll5j6fsgy7wq0fg48ddx6h78j7cgg7md75756f"; depends=[fields GEOmap MBA RCurl rvest stringr uuid XML]; }; rODE = derive2 { name="rODE"; version="0.99.6"; sha256="0l518ghfw6283kckqcbh45a35vd73njy05v3dwghhhjdj7v3km8b"; depends=[data_table]; }; rPACI = derive2 { name="rPACI"; version="0.1.1"; sha256="0skpv7h91vfr8xkx0ic8yz7hcj1bbwd1f80sa9p9jn2rpfpzalv9"; depends=[]; }; rPAex = derive2 { name="rPAex"; version="1.0.1"; sha256="1v85qy8fg6vf1fqqqawzw4i9sfaihdqzbs0h91hpqbzkc4v7n2bb"; depends=[agricolae raster]; }; @@ -12244,16 +12264,15 @@ in with self; { rPraat = derive2 { name="rPraat"; version="1.3"; sha256="1ngd8q6jpzrn09042w68662hkx238ai96z9bfy0danvdii3xplyh"; depends=[dplyr dygraphs readr stringr tuneR]; }; rPref = derive2 { name="rPref"; version="1.3"; sha256="0vlzhxhf2x6gw015sjfw2638wv6hckg068rpbzncp7wprn9msa6y"; depends=[dplyr igraph lazyeval Rcpp RcppParallel]; }; rPython = derive2 { name="rPython"; version="0.0-6"; sha256="1aw9jn45mw891cskr51yil60i55xv5x6akjvfdsbb9nwgdwwrqdp"; depends=[RJSONIO]; }; - rQCC = derive2 { name="rQCC"; version="0.19.8.2"; sha256="091c53jggq3k9sf48pnds8s4kkqia6x268lbkb2fx88b408i0iny"; depends=[]; }; + rQCC = derive2 { name="rQCC"; version="1.20.3"; sha256="01gi447qwm6j682s7ka034g28k74l3fr9ijam6l9n0f228q930gp"; depends=[]; }; rRAP = derive2 { name="rRAP"; version="1.1"; sha256="1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb"; depends=[lars lassoshooting MASS]; }; + rSCA = derive2 { name="rSCA"; version="3.1"; sha256="0dhd5325x05cbnw34mlipndw5xnncl9kj7kppb2s5bx2gllcdqqd"; depends=[]; }; rSEA = derive2 { name="rSEA"; version="2.1.0"; sha256="0zym2kg7vzi61xiglwr3dw5kvavjqcgjj56219aqyclkqrnf67rc"; depends=[hommel]; }; rSFA = derive2 { name="rSFA"; version="1.04"; sha256="0gd6ji1ynbb04rfv8jfdmp7dqnyz8pxcl5636fypd9a81fggl0gs"; depends=[MASS]; }; rSHAPE = derive2 { name="rSHAPE"; version="0.3.2"; sha256="0z6dizsxlkmaymbd24b1m1i8kmndcf21nxxnyfzq6gvdii7bal4h"; depends=[abind DBI doParallel evd foreach RSQLite sn VGAM]; }; - rSPARCS = derive2 { name="rSPARCS"; version="0.0.7"; sha256="0z9l7d03r5qxnnl9as2dl1z8r8a28qbwp8n69sxrnd7rffcwm17l"; depends=[data_table geosphere plyr raster sp spatialEco tigris]; }; - rSPDE = derive2 { name="rSPDE"; version="0.4.6"; sha256="1fdk7mhrkp5r7lr9rn9wz1rbxinrr8yvfcss9ky8namp7f65vwa1"; depends=[Matrix]; }; + rSPDE = derive2 { name="rSPDE"; version="0.4.8"; sha256="1m8ys6k3f1jy9iiby36sw0gvz282bhpzgnwa801hv59k411wrh2g"; depends=[Matrix]; }; rSQM = derive2 { name="rSQM"; version="1.3.14"; sha256="0m69n2pnfv2085dln6p149a5gw0gif9xk00xmad5s9j68hwjdmym"; depends=[dplyr EcoHydRology ggplot2 gsubfn mise ncdf4 qmap reshape2 stringr yaml zoo]; }; rSymPy = derive2 { name="rSymPy"; version="0.2-1.2"; sha256="0jdl8ss3dbgjqrmmppb0ix1gqk9g28pbh6w5sybil046ic83s13i"; depends=[rJython]; }; - rSymbiota = derive2 { name="rSymbiota"; version="1.0.0"; sha256="0dld8li5b8ylhdmll6iz5pk4pxh2dk37hbx0458jn0zhd4fl1cm7"; depends=[crayon dplyr ggplot2 Hmisc httr knitr magick maps mapview RCurl RSelenium rvest rworldmap sf sp stringr sys treemap XML xml2]; }; rTRNG = derive2 { name="rTRNG"; version="4.20-1"; sha256="0l0gs65rbl080f1l67xiygz551q5lj0q48nz8m6gsjfq5ias5gn6"; depends=[Rcpp RcppParallel]; }; rTableICC = derive2 { name="rTableICC"; version="1.0.7"; sha256="1z896675kmm9p5dnmcnsz2205ynf05laqcxvlc9y0g5i0x8rf8v6"; depends=[aster partitions]; }; rTensor = derive2 { name="rTensor"; version="1.4"; sha256="08i94vvk5i25j40dwn497svgrmz90iwzp6qgiir37wgvx355xwzr"; depends=[]; }; @@ -12261,12 +12280,12 @@ in with self; { rTorch = derive2 { name="rTorch"; version="0.0.3"; sha256="1v7zvjkbllcjria7slv958bpwv1r0p3li2i8wq55hgm7g7iyfz1j"; depends=[data_table jsonlite logging R6 reticulate rstudioapi]; }; rUnemploymentData = derive2 { name="rUnemploymentData"; version="1.1.0"; sha256="0p5hba8iv060szp23s05hvpmwan518ykakm6vqzdcki0inxw0hyv"; depends=[choroplethr rvest stringr]; }; rWBclimate = derive2 { name="rWBclimate"; version="0.1.3"; sha256="0vs56hx7a85pw4jx8nb8bdlr9dbkl4zdhzhqsm0505xc3qz18vxh"; depends=[ggplot2 httr jsonlite plyr reshape2 rgdal sp]; }; - rWind = derive2 { name="rWind"; version="1.1.3"; sha256="1q9f7mrjks7nb9lgkmi6w774dz479d2hhzhns0v0mrllmv9nck1s"; depends=[gdistance lubridate Matrix raster]; }; + rWind = derive2 { name="rWind"; version="1.1.5"; sha256="1fdnbh6yprgbysv6j6i108q9z6b7r17kb2hg4i4sa97c2jlcb39s"; depends=[gdistance lubridate Matrix raster]; }; rWishart = derive2 { name="rWishart"; version="0.1.2"; sha256="0wzijc454mrvmggb7a5jqwjbmk0kzr4bmy0iwniz5cn343pr1rri"; depends=[lazyeval MASS Matrix]; }; rYoutheria = derive2 { name="rYoutheria"; version="1.0.3"; sha256="1r63ggy4knwzxnpjkmsn7zwmwfaznm8mmxl7r9ph10wz4sblgygl"; depends=[plyr RCurl reshape2 RJSONIO]; }; - rabhit = derive2 { name="rabhit"; version="0.1.1"; sha256="010ayd8hyk02gwpnpa06n2rymxl1hy3j4jm5cn4x2xl3mj2kzg8h"; depends=[alakazam cowplot data_table dendextend dplyr ggdendro ggplot2 gridExtra gtable gtools htmlwidgets plotly RColorBrewer reshape2 rlang stringi tidyr tigger]; }; + rabhit = derive2 { name="rabhit"; version="0.1.4"; sha256="1r02brl2ca33ccd2b3dhf1zfx9zg0vqsvnqlbvd68mqgl74xqlbl"; depends=[alakazam cowplot data_table dendextend dplyr fastmatch ggdendro ggplot2 gridExtra gtable gtools htmlwidgets plotly RColorBrewer reshape2 rlang splitstackshape stringi tidyr tigger]; }; rabi = derive2 { name="rabi"; version="1.0.2"; sha256="0jndx1gvsnsv1xrx3ismgvjp7d4kj3436zcawvw32c5klvxx0y4j"; depends=[numbers polynom shiny stringdist]; }; - raceland = derive2 { name="raceland"; version="1.0.3"; sha256="0gd5x3k1mdk6s1svgv9vgy2bzml6qg74rfr6p009g2bkbxpcjydy"; depends=[comat fasterize plotwidgets raster Rcpp RcppArmadillo sf]; }; + raceland = derive2 { name="raceland"; version="1.0.5"; sha256="16li2ywnrr8ciiswg3pw0asli4xi7grqmxnpxcfsw4gq2ihhxjvp"; depends=[comat fasterize plotwidgets raster Rcpp RcppArmadillo rgdal sf]; }; radar = derive2 { name="radar"; version="1.0.0"; sha256="1wh5j3cfbj01jx2kbm9ca5cqhbb0vw7ifjn426bllm4lbbd8l273"; depends=[]; }; radarBoxplot = derive2 { name="radarBoxplot"; version="1.0.0"; sha256="16s38yy984mb1hmsdw17z4nk2z4xg03xi0yrp7445yqv3fs1fghl"; depends=[]; }; radarchart = derive2 { name="radarchart"; version="0.3.1"; sha256="0gcxnbgj8ja1m4wzhbjy67m6zphf0c5ni9yx7sr7f0abm03ry753"; depends=[htmltools htmlwidgets]; }; @@ -12282,18 +12301,18 @@ in with self; { radjust = derive2 { name="radjust"; version="0.1.0"; sha256="0krryhqid16a6jfb007n0k6rc8r7c808h859a9pjid2jbkg0bm7l"; depends=[]; }; radlibs = derive2 { name="radlibs"; version="0.1.0"; sha256="1yyd63shc35mdixkz8gigwqb9g2l1baxgmzijhshpqavixdhazmk"; depends=[data_table lexicon stringr]; }; radmixture = derive2 { name="radmixture"; version="0.0.1"; sha256="0rs60xjd43lg5c9972qhpg6bsqfg2578qvrz7gz3bdip10jb1ryj"; depends=[magrittr MCMCpack plyr quadprog]; }; - radsafer = derive2 { name="radsafer"; version="2.1.0"; sha256="01xsrl39rv8jjm7rkqy24q6p92i4axyia6gn4d174c18kavz1rj1"; depends=[dplyr ggplot2 magrittr RadData readr rlang stringr]; }; + radsafer = derive2 { name="radsafer"; version="2.2.0"; sha256="0xkmyxw2lslgy22rnb1ll4zw4h06p4ldvaavvwnzy8l7mzqlr6in"; depends=[dplyr ggplot2 ggthemes magrittr RadData readr rlang stringr]; }; rafalib = derive2 { name="rafalib"; version="1.0.0"; sha256="1dmxjl66bfdgrybhwyaa8d4i460liqcdw8b29a6w7shgksh29m0k"; depends=[RColorBrewer]; }; - ragg = derive2 { name="ragg"; version="0.1.3"; sha256="116dmzy81y3r4jpbv7gqx76y33rgrsdzklr0vhblzsph52a59i7m"; depends=[systemfonts]; }; + ragg = derive2 { name="ragg"; version="0.1.5"; sha256="1fqklwwmaf3vyj87kir46bpa9cv1fwyw3amgayh0zcdjfrk6flww"; depends=[systemfonts]; }; rags2ridges = derive2 { name="rags2ridges"; version="2.2.2"; sha256="1xayfj9ac1czl6pipfnr3a3r0jrdfvsqiksf9w4blavpp9xv9dbp"; depends=[expm fdrtool ggplot2 graph gRbase Hmisc igraph RBGL Rcpp RcppArmadillo reshape RSpectra sfsmisc snowfall]; }; - ragt2ridges = derive2 { name="ragt2ridges"; version="0.3.3"; sha256="1vk1pvfbf0b59wkvwj33y80wlvvqmqc0k6l64li7avig1im3n088"; depends=[abind expm fdrtool igraph MASS Matrix mvtnorm rags2ridges Rcpp RcppArmadillo]; }; - ragtop = derive2 { name="ragtop"; version="1.1.0"; sha256="1gz4hdfb4yxjqcmclxw2yacpk0km29n3gfpqkcj48wr1s6vv7djb"; depends=[futile_logger limSolve]; }; + ragt2ridges = derive2 { name="ragt2ridges"; version="0.3.4"; sha256="17i3z0p3a4dqa0bch5l1r830w5nlxhdg71y82jipp6cfiwli588z"; depends=[abind Biobase CGHbase expm fdrtool igraph MASS Matrix mvtnorm rags2ridges Rcpp RcppArmadillo]; }; + ragtop = derive2 { name="ragtop"; version="1.1.1"; sha256="0vgc2q71g8ysccq19kbk9a4swxgd5qj91xm4bshfgdg5chxqnb50"; depends=[futile_logger limSolve]; }; rai = derive2 { name="rai"; version="1.0.0"; sha256="0qimfzchbrarkwmv3mxxbdgvqzk16sc8m1h140zm0cnfgr2pvi5p"; depends=[dplyr ggplot2 readr rlang]; }; rainbow = derive2 { name="rainbow"; version="3.6"; sha256="11vfcck17d2xjc049ci5i8l1nqv345anmd110gdz7654i1pj9lb3"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; }; - raincpc = derive2 { name="raincpc"; version="0.4"; sha256="0yzpyidvf24frf82pj7rarjh0ncm5dhm0mmpsf2ycqlvp0qld10i"; depends=[SDMTools]; }; + raincpc = derive2 { name="raincpc"; version="1.1.0"; sha256="1f59z989q0ipwnkxwiwqj9m6v37qli6c5f1ks5kml5ndpmjxf1h1"; depends=[raster]; }; rainfarmr = derive2 { name="rainfarmr"; version="0.1"; sha256="1gasnmyjnis6vv0krx6299ck2a6v9v1fgqajzqdpjaz2fsxn245i"; depends=[]; }; rakeR = derive2 { name="rakeR"; version="0.2.1"; sha256="0cd89q6k0y9z1qk9k06iw56lhj4c52ckr0g4qv6q95lkyrbi3qg8"; depends=[ipfp wrswoR]; }; - ralger = derive2 { name="ralger"; version="1.0.0"; sha256="069cnlxj7kclw84wsx9mcrs7zhxzsg1983vi78c0zksii6q8lbqa"; depends=[dplyr magrittr rvest stringr testthat tidyr xml2]; }; + ralger = derive2 { name="ralger"; version="1.1.0"; sha256="077yi2xba2ilhsr0r689r74axazb3wpxz0w8ic6c17jplm828q7s"; depends=[crayon dplyr magrittr purrr robotstxt rvest stringr testthat tidyr xml2]; }; ramchoice = derive2 { name="ramchoice"; version="1.1"; sha256="1im9r95109919hfmici6avdqxh3a375wmg2lfy75z1gjivvcygbr"; depends=[MASS]; }; ramcmc = derive2 { name="ramcmc"; version="0.1.0-1"; sha256="0x8q0bah8fcyqlwap9iw52xhl6b989va5c144kgmfimh2b4yinc7"; depends=[Rcpp RcppArmadillo]; }; ramify = derive2 { name="ramify"; version="0.3.3"; sha256="0cxmkxhshg0vrcxai2gbm4iih04f44liv5nh5jiq85hjz8qbhdi2"; depends=[]; }; @@ -12323,23 +12342,22 @@ in with self; { randquotes = derive2 { name="randquotes"; version="0.1.1"; sha256="0fj9vx0c4059511wka7ip30yz87y144pz7ny840gp72qm73pp8li"; depends=[curl httr jsonlite xml2]; }; randstr = derive2 { name="randstr"; version="0.2.0"; sha256="17593lbk6r089yasafd21i3v90ya9n92rflpzl0qicd2kqqk2gdh"; depends=[random stringi truncnorm]; }; randtests = derive2 { name="randtests"; version="1.0"; sha256="03z3kxl4x0l91dsv65ld9kgc58z82ld1f4lk18i18dpvwcgkqk82"; depends=[]; }; - randtoolbox = derive2 { name="randtoolbox"; version="1.30.0"; sha256="141p13ajgzmb2s89rlac7zrra92mi1izvpfrngb4kqzlf3igdsqd"; depends=[rngWELL]; }; + randtoolbox = derive2 { name="randtoolbox"; version="1.30.1"; sha256="0qg20ar6qns858jdzqhmfq7yji81czhr6cim257958gqpj66sn95"; depends=[rngWELL]; }; rangeBuilder = derive2 { name="rangeBuilder"; version="1.5"; sha256="17wyf9ljgdbpxgl9gy6f1279h88k0rjfcarw7kgp145bm3c36jwf"; depends=[alphahull cleangeo pbapply raster Rcpp rgdal rgeos sp stringi]; }; rangeMapper = derive2 { name="rangeMapper"; version="0.3-7"; sha256="0b457qxlhwcnsw9x60mccvivq7a5cg7lkyfmsfva7qaipnjixcmh"; depends=[classInt data_table doFuture foreach future future_apply ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; }; - rangeModelMetadata = derive2 { name="rangeModelMetadata"; version="0.1.2"; sha256="1d31nz2izppkj0zsm6iq74py5s7zg4w3vvjjxzbzprnj2x6r9zlw"; depends=[biomod2 dismo dplyr ecospat ENMeval googlesheets jsonlite MASS raster rgbif rgdal rgeos shiny sp spatstat spocc spThin]; }; - rangemodelR = derive2 { name="rangemodelR"; version="1.0.4"; sha256="0y8hdqi04n3pc3iwz82gikn61h42bmfi7iccwgbglk8wkrkg4gy0"; depends=[]; }; + rangeModelMetadata = derive2 { name="rangeModelMetadata"; version="0.1.3"; sha256="028q6lxz1ljna38cz5647yv0vzjw3jpsqwqhzf5rshmvfi8c0vv2"; depends=[dplyr jsonlite MASS raster rgbif rgdal rgeos shiny sp spatstat spocc spThin]; }; ranger = derive2 { name="ranger"; version="0.12.1"; sha256="1vr5akgh388iivrxi0g4pl2npq9dc4cim3ljk4kjf637q058wc7w"; depends=[Matrix Rcpp RcppEigen]; }; - rankFD = derive2 { name="rankFD"; version="0.0.3"; sha256="0cqvr01hbq3cz2zxmysl2k88wfckyvnlsdk8ypdxdkap4gavnvqv"; depends=[coin lattice MASS Matrix]; }; + rankFD = derive2 { name="rankFD"; version="0.0.5"; sha256="0988fr18faahb9z0514pljmby6pxmn3b0ynb6ymmi3n4vpzzj4ki"; depends=[coin lattice MASS Matrix]; }; rankdist = derive2 { name="rankdist"; version="1.1.4"; sha256="1xqrkss8d5vv3blqpvrvdczsygphbx259hy9j7w9b2ahssw8cjr5"; depends=[hash optimx permute Rcpp]; }; rankhazard = derive2 { name="rankhazard"; version="1.1.0"; sha256="0kljn9b74alrd22b5pwfnamdbaqi2wa2z6yzpmgpfs3x0hv72fw7"; depends=[survival]; }; rapbase = derive2 { name="rapbase"; version="1.10.0"; sha256="0x1xr0qw5qq9rsas3ysxlvmim3jhkf5za4lxr6f15vx4rjfx77wv"; depends=[DBI devtools digest gistr httr knitr magrittr readr RJDBC RMariaDB sendmailR shiny yaml]; }; rapiclient = derive2 { name="rapiclient"; version="0.1.3"; sha256="1pm4kdga2nz1cpmchdb0ad8gr3bqfm84b1kl32cyc0x3x5rr2syz"; depends=[httr jsonlite yaml]; }; - rapidjsonr = derive2 { name="rapidjsonr"; version="1.1"; sha256="0h4phjjhykbb45rg5b1xn48vqxdcvcngbm0416ds8in7j469wbwd"; depends=[]; }; + rapidjsonr = derive2 { name="rapidjsonr"; version="1.2.0"; sha256="07zdirhbzmvq3cp4xn8ngk1lgxbbabzays315zxbs3sxrz6lzjb2"; depends=[]; }; rapidxmlr = derive2 { name="rapidxmlr"; version="0.1.0"; sha256="14pa08yp8xmbqk8wwinz1xsphx75xq6vg8zgzcxc5zgmcf0ja5if"; depends=[]; }; rappdirs = derive2 { name="rappdirs"; version="0.3.1"; sha256="0ji6sg3bdn5gazkq14xmmcq7jnbsyxw4lzmmbgv6526j2vn93n1g"; depends=[]; }; rapport = derive2 { name="rapport"; version="1.0"; sha256="1i1zawar5yxw23km74mrvaxnc9hr06kqjvbm046c09cqi6pw0hjh"; depends=[pander rapportools stringr yaml]; }; rapportools = derive2 { name="rapportools"; version="1.0"; sha256="1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"; depends=[pander plyr reshape]; }; - raptr = derive2 { name="raptr"; version="0.1.4"; sha256="0vh28js06rzf9d7j4ijkfjxn9ppk12705mr8xh4147xnxi1ivn7k"; depends=[adehabitatHR assertthat BH boot doParallel gdalUtils ggplot2 hypervolume ks Matrix mvtnorm PBSmapping plyr RandomFields raster RColorBrewer Rcpp RcppEigen rgdal rgeos RgoogleMaps scales shape sp]; }; + raptr = derive2 { name="raptr"; version="0.1.6"; sha256="0jx3g04c1yzvk42hiwkmbb8hf2lmg909lvjhka2f528wbg80lh1r"; depends=[adehabitatHR assertthat BH boot doParallel gdalUtils ggplot2 hypervolume ks Matrix mvtnorm PBSmapping plyr RandomFields raster RColorBrewer Rcpp RcppEigen rgdal rgeos RgoogleMaps scales shape sp]; }; rare = derive2 { name="rare"; version="0.1.1"; sha256="0j78ilswiaxdp9107psiw8ibxncd7i81z2njhfqf0n7532pbvjss"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; rareGE = derive2 { name="rareGE"; version="0.1"; sha256="0v3a2wns77q923ilddicqzg0108f8kmfdnsff1n65icin7cfzsny"; depends=[MASS nlme survey]; }; rareNMtests = derive2 { name="rareNMtests"; version="1.1"; sha256="13r2hipqsf8z9k48ha5bh53n3plw1whb7crpy8zqqkcac8444b2z"; depends=[vegan]; }; @@ -12347,7 +12365,8 @@ in with self; { rasciidoc = derive2 { name="rasciidoc"; version="2.0.1"; sha256="0mj3qn048ppxddq2ml06hvccixxg7kvb9rsx9iy9mn4rr2caw67v"; depends=[document highr knitr]; }; rasclass = derive2 { name="rasclass"; version="0.2.2"; sha256="1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50"; depends=[car e1071 nnet randomForest RSNNS]; }; rase = derive2 { name="rase"; version="0.3-3"; sha256="03jqf5y5vj354m9psp81wzw6d7dfqr76bfjqv9kannsakkj587sy"; depends=[ape mvtnorm polyCub rgl sm spatstat]; }; - raster = derive2 { name="raster"; version="3.0-7"; sha256="0faxv71hlxkblvbi3ps1vfzm3wwi0brwzmpsr5114bddcqyiqkvn"; depends=[Rcpp sp]; }; + raster = derive2 { name="raster"; version="3.0-12"; sha256="0rrbsigkqxsdic8fly6nrsc79zsliwvr1x2b4xqpl9d34vr50dvg"; depends=[Rcpp sp]; }; + rasterDT = derive2 { name="rasterDT"; version="0.3.1"; sha256="1dl083jm4x0shl7lq4in2alksgi63hp1p7j2cnsvkmwjaxygzm9v"; depends=[data_table fasterize raster sf]; }; rasterImage = derive2 { name="rasterImage"; version="0.4.0"; sha256="191m5k1rbbwziznmxbsq4g55afkw8gb5011i70f3wx3dscr3phxz"; depends=[plotrix]; }; rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; }; rasterList = derive2 { name="rasterList"; version="0.5.8"; sha256="0q7apglxzpah04463z07cpkzyd6l6dbbdhm601brzh6yk75z20vh"; depends=[raster]; }; @@ -12356,7 +12375,7 @@ in with self; { rasterly = derive2 { name="rasterly"; version="0.1.0"; sha256="128699nc1y2parfwqfx31afdy3f91z5iarpx8q1v5qfmbmb12ppx"; depends=[data_table ggplot2 magrittr plotly Rcpp rlang]; }; rasterpdf = derive2 { name="rasterpdf"; version="0.1.1"; sha256="0zi54nifbb4dzb29i8rskynblw3z42vzaykwbq30ia5zs9q1bvm5"; depends=[png]; }; ratelimitr = derive2 { name="ratelimitr"; version="0.4.1"; sha256="06x759jxr5zcnvg9q120n5bpipkb16piw15kxrpk7i918mby889b"; depends=[assertthat]; }; - ratematrix = derive2 { name="ratematrix"; version="1.2.1"; sha256="0hbwfgwkkd5a83f3nqk5gdyiqbpzsgshvcjcslaz73si05zsrkgs"; depends=[ape coda corpcor ellipse geiger MASS mvMORPH phylolm Rcpp RcppArmadillo readr]; }; + ratematrix = derive2 { name="ratematrix"; version="1.2.2"; sha256="08zc3yacgmd7y50nykbdqwq655jn3gz4x1ywrhvz8fymsdhdd39g"; depends=[ape coda corpcor ellipse geiger MASS mvMORPH phylolm Rcpp RcppArmadillo readr]; }; rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; }; raters = derive2 { name="raters"; version="2.0.1"; sha256="16jnx6vv39k4niqkdlj4yhqx8qbrdi99bwzxjahsxr12ab5npbp1"; depends=[]; }; ratesci = derive2 { name="ratesci"; version="0.3-0"; sha256="1mdx47xpgjrjbb3lybajdmxb87dqr6cvv3fsvwfx0n629mjbih4z"; depends=[]; }; @@ -12365,37 +12384,38 @@ in with self; { rattle = derive2 { name="rattle"; version="5.3.0"; sha256="1siwnmh5yna63354jd8aypffk1naicvvnjykv5cssqyjdldcwp37"; depends=[dplyr ggplot2 magrittr rpart_plot stringi stringr tidyr XML]; }; rattle_data = derive2 { name="rattle.data"; version="1.0.2"; sha256="0cnmyzvy23jc4vz521c3jg0w4165waycvy5014l5773fy19zq75c"; depends=[]; }; raustats = derive2 { name="raustats"; version="0.15.0"; sha256="047vs3wvakwkh7c98rgswhj73m43d6ryax2jblbdp5199knn5cm5"; depends=[dplyr httr jsonlite lubridate readxl rvest tidyr xml2]; }; + ravelRy = derive2 { name="ravelRy"; version="0.1.0"; sha256="07mywv57rw2b309i2qisbpx1x3sb3z6n2b5gia9bdmb2m4hhpdai"; depends=[dplyr httr jsonlite purrr tibble tidyr]; }; raw = derive2 { name="raw"; version="0.1.6"; sha256="0hnqwa9pwj3k2y0bs6hxrvbwksjyq0q6m73c9hhlafg8g3lkyxnf"; depends=[]; }; + rawKS = derive2 { name="rawKS"; version="0.1.0"; sha256="1yiw9imhgij49qbm9hk6psb73zngqmxxwnaxq144ydwb7fbk6j0z"; depends=[dplyr ggplot2 magrittr ROCR tidyr]; }; rawr = derive2 { name="rawr"; version="0.1.0"; sha256="1a8r1vyvki3z2ms4miqv6wq9pzympgifsjx0pzzs6f4b40m083lq"; depends=[dplyr jsonlite rvest xml2]; }; raws_profile = derive2 { name="raws.profile"; version="0.1.0"; sha256="04f7wk7x9j3rb6nn3zqss9vw0h9a4vpcjyilc2vqy0fm2by41xkg"; depends=[stringr tibble withr]; }; - rayrender = derive2 { name="rayrender"; version="0.4.2"; sha256="070h6p7dmai0rrdiyghr97i3jn9yj86ak74zvw019b6g50rid6h6"; depends=[assertthat magrittr png progress purrr raster Rcpp RcppThread tibble]; }; + rayimage = derive2 { name="rayimage"; version="0.2.3"; sha256="17j5kxm6vp2ac3ydg2nc6aizk8i7nbp3j7qn4fnmmy9am9yq6xis"; depends=[doParallel foreach jpeg magrittr png progress raster rayshader Rcpp RcppArmadillo scales]; }; + rayrender = derive2 { name="rayrender"; version="0.6.0"; sha256="19al04afiibd0hbvlps4zwmm085x0vnfkbn5lpd3mzyilccyjhcb"; depends=[assertthat magrittr png progress purrr raster Rcpp RcppThread tibble]; }; rayshader = derive2 { name="rayshader"; version="0.13.7"; sha256="0mlygrsbg0nzz8hhz0q28hizqh3ck4vdi67i9cvgpkrrnm13jyqx"; depends=[doParallel foreach ggplot2 magrittr png progress raster rayrender Rcpp RcppArmadillo rgl scales]; }; - rbacon = derive2 { name="rbacon"; version="2.3.9.1"; sha256="0gnvi0aaw4yyg1cvrdyps2590gx1lwcjl21y4q9zn3k00mnwmc12"; depends=[coda Rcpp]; }; + rbacon = derive2 { name="rbacon"; version="2.4.1"; sha256="0xxgdh3zr2k0asxklbpyn1d0q67hdmd5r81s9y8x4anjjvz5zx0g"; depends=[coda Rcpp]; }; rbart = derive2 { name="rbart"; version="1.0"; sha256="1byfm1ycw9nfhdblqklyn8pxn6b9q5fa3inbgfpynqpsid97ig35"; depends=[Rcpp]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; rbenchmark = derive2 { name="rbenchmark"; version="1.0.0"; sha256="010fn3qwnk2k411cbqyvra1d12c3bhhl3spzm8kxffmirj4p2al9"; depends=[]; }; rbgm = derive2 { name="rbgm"; version="0.0.5"; sha256="1gz9hxlwmj2ch1ds6mx1nlkwy4fm811jkz5fz3cl6675n11bjdpg"; depends=[dplyr geosphere raster readr rlang sp stringr tibble]; }; - rbhl = derive2 { name="rbhl"; version="0.8.0"; sha256="1avx36as99za19acjh7adb72ckdn69rmiwzcrrqxskzny56vxf0d"; depends=[crul jsonlite plyr tibble xml2]; }; - rbi = derive2 { name="rbi"; version="0.10.2"; sha256="158yi9d8pxgb5b1x1qpjzrfnq673vmsbmgm00w0dbk03akcvlfzc"; depends=[data_table ncdf4 processx reshape2]; }; - rbi_helpers = derive2 { name="rbi.helpers"; version="0.3.1"; sha256="0hngqbdydvvp4zmicvnnmwz3fw6pjvgdxp7h80zk1qczid2yg4x5"; depends=[data_table lubridate Matrix rbi reshape2]; }; - rbin = derive2 { name="rbin"; version="0.1.1"; sha256="1rbwm5xc61sva1m3n5hd9vsh7gm4hamswny35zm7j0fyc4v4bzxz"; depends=[DescTools dplyr forcats ggplot2 glue magrittr miniUI purrr recipes rlang rstudioapi shiny tibble]; }; + rbhl = derive2 { name="rbhl"; version="0.9.0"; sha256="0n9jxyrpq1s0yq13ylkhm0qcjlm8b25p19vpxv2s4wxan758zypd"; depends=[crul jsonlite plyr tibble xml2]; }; + rbin = derive2 { name="rbin"; version="0.1.2"; sha256="0kiad4l0qplzxqx6zx5fp48lq5g6l80qgydfri0vh3giadzcmsp7"; depends=[DescTools dplyr forcats ggplot2 magrittr miniUI recipes rlang rstudioapi shiny tibble]; }; rbiouml = derive2 { name="rbiouml"; version="1.9"; sha256="01ysjq49nhawp0r2by7b15s4b7bzsbn2xhdcyyrh38vrl04rpf57"; depends=[RCurl RJSONIO]; }; rbison = derive2 { name="rbison"; version="0.8.0"; sha256="0x2yiq1wvm6mzmhfa3ds8mmhidv91hxi14nhz4nib6nmna3c9al2"; depends=[crul data_table dplyr ggplot2 jsonlite mapproj plyr sp]; }; rbit = derive2 { name="rbit"; version="1.0.0"; sha256="09ywr711gv0vgfims2vfcxk3rnd0iadzlksil0q9159yarapfc59"; depends=[R6]; }; rbitcoinchartsapi = derive2 { name="rbitcoinchartsapi"; version="1.0.4"; sha256="0r272jvjh3rzch8dmn4s0a5n5k6dsir7pr4qswzfvafqjdiwjajz"; depends=[RCurl RJSONIO]; }; rblt = derive2 { name="rblt"; version="0.2.4.5"; sha256="1pfg8sgm532czz3lhpx7dmg5zik3bc0p4vdq9s0qk5zgq7nnm9sj"; depends=[data_table dygraphs hdf5r shiny xts]; }; - rbmn = derive2 { name="rbmn"; version="0.9-2"; sha256="1zy832y399cmfmhpyfh7vfd293fylf1ylmp8w8krkmzkmyfa80f2"; depends=[MASS]; }; + rbmn = derive2 { name="rbmn"; version="0.9-3"; sha256="08rcxvxi1wav2ysnp5ydkyinykcjw3vwb56g8zdx9ziqbd7cwkgv"; depends=[MASS]; }; rbokeh = derive2 { name="rbokeh"; version="0.5.0"; sha256="1lpbph6bhh9rf5rs0ivp8dchx8i8ylz5nr7xc2xv9bnwlwj35729"; depends=[digest ggplot2 gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; rbounds = derive2 { name="rbounds"; version="2.1"; sha256="1h334bc37r1vbwz1b08jazsdrf6qgzpzkil9axnq5q04jf4rixs3"; depends=[Matching]; }; - rbraries = derive2 { name="rbraries"; version="0.1.0"; sha256="12vdci4rzjvd419nxh99hpkhjlx86nsmrbjca0am5q0rkc68dgmj"; depends=[crul data_table fauxpas jsonlite tibble]; }; - rbridge = derive2 { name="rbridge"; version="1.0"; sha256="1ggak2rp20vs3zzpl86yaa9dkxxwmnznbzxcy4wzdgsllmfij628"; depends=[dplyr Matrix Rcpp RcppArmadillo]; }; + rbraries = derive2 { name="rbraries"; version="0.2.0"; sha256="00fl1vr8m1lalib1j35d7g0ybm4wv6qvy0gzl37ij2cc844ij6jd"; depends=[crul data_table fauxpas jsonlite tibble]; }; + rbridge = derive2 { name="rbridge"; version="1.0.2"; sha256="0m4c61rdrhq1jw3rwq2ld29g5dchbk4sfpnq0wmwbvzhdjq76plc"; depends=[dplyr Matrix Rcpp RcppArmadillo]; }; rbtc = derive2 { name="rbtc"; version="0.1-6"; sha256="1z5p1jn5b0hzwcbdpiwj224h45x01bbsgkskllir5j13l416561p"; depends=[gmp httr openssl rjson]; }; rbtt = derive2 { name="rbtt"; version="0.1.0"; sha256="1gbsb0vmqxcl28c5nn0rz95bxrvl7i0b17lq90cj5ahbk6x9jblz"; depends=[data_table]; }; rbundler = derive2 { name="rbundler"; version="0.3.7"; sha256="0wmahn59h9vqm6bq1gwnf6mvfkyhqh6xvdc5hraszn1419asy26f"; depends=[devtools]; }; rbvs = derive2 { name="rbvs"; version="1.0.2"; sha256="1wzxz2ca8f1phhbqr9p7c8sk09cyrdq5jc45g4ddrqvi2q29k28y"; depends=[]; }; rcane = derive2 { name="rcane"; version="1.0"; sha256="0p2mgkq6fh0n289n2h19c52lnqxl05wvpmd6nwvgnjqwa4wwpa7r"; depends=[]; }; rcanvec = derive2 { name="rcanvec"; version="0.2.1"; sha256="0gsk2cfiysxjw2lrnpl2l524lvhh9nhnyyh79n8p7vykyqj711yn"; depends=[rgdal sp]; }; - rcarbon = derive2 { name="rcarbon"; version="1.3.0"; sha256="1g17hdqs64hpnq77hxy0krpl1nl89g8433dn67bycfzbpih8xnr6"; depends=[doParallel foreach knitr sp spatstat]; }; + rcarbon = derive2 { name="rcarbon"; version="1.3.1"; sha256="1qdmbvp758758ny2d4y0xi5gdhzvjmwvxh6yjhmavhb454fys0yi"; depends=[doParallel foreach knitr sp spatstat]; }; rcartocolor = derive2 { name="rcartocolor"; version="2.0.0"; sha256="08ljaag2mnhz2671zvwji1sp003z94lz30vjidmybm9fp8piqw5g"; depends=[ggplot2 scales]; }; rcbalance = derive2 { name="rcbalance"; version="1.8.5"; sha256="15qlk3cqwsvixl17l1fxcajrabmz4y7q5gz0a1pd66f6i1xskcqq"; depends=[MASS plyr]; }; rcbsubset = derive2 { name="rcbsubset"; version="1.1.4"; sha256="0sfsmnxs4c8blzg0bb2ffb2xcsjv7pp39arnda988f7b2aas59wj"; depends=[MASS plyr]; }; @@ -12403,10 +12423,10 @@ in with self; { rccdates = derive2 { name="rccdates"; version="1.0.0"; sha256="1f87qlw62am2qy1zzrz91vmsn8axhld44gak61xa7046675hm98s"; depends=[rccmisc]; }; rccmisc = derive2 { name="rccmisc"; version="0.3.7"; sha256="171s2ll759xjdnx0z24ih5ix2vcp4qnmf1nf107gij6wv8k450ab"; depends=[dplyr]; }; rcdd = derive2 { name="rcdd"; version="1.2-2"; sha256="0pzpbqnlgzr240iici70278py5wnbbxkzlgn112f9wv5ga3riric"; depends=[]; }; - rcdk = derive2 { name="rcdk"; version="3.4.7.2"; sha256="0fnbv8gjzl77c5s1byw8xn16dxxpd7phcyqzd284x7n010fmdyq6"; depends=[fingerprint iterators itertools png rcdklibs rJava]; }; - rcdklibs = derive2 { name="rcdklibs"; version="2.0"; sha256="05g0y00bw1bqykfbwn4q42krwcfl50jcavaw7yyw9a5m34hvw0l8"; depends=[rJava]; }; + rcdk = derive2 { name="rcdk"; version="3.5.0"; sha256="05bz2pnvfci8sd9l4i0jay8rwvfnw87r9xqzvq5306mfbhik20fy"; depends=[fingerprint iterators itertools png rcdklibs rJava]; }; + rcdklibs = derive2 { name="rcdklibs"; version="2.3"; sha256="16ijvzsc1irpz1z2xd82i2saafsvpn0x5lr54c5gx9bfb35gacyp"; depends=[rJava]; }; rchallenge = derive2 { name="rchallenge"; version="1.3.2"; sha256="1qib09vlajw62zdhx8gkmmhlgc8k0dqdxx8ai8zdwxhfff253glc"; depends=[knitr rmarkdown]; }; - rcheology = derive2 { name="rcheology"; version="3.6.2.0"; sha256="19llfyvaqiv5dzmw4lkfaia28hi4n1s66iazh8yw7nqql16s4nj8"; depends=[]; }; + rcheology = derive2 { name="rcheology"; version="3.6.3.0"; sha256="16ci41541by8plw87wl754clqn241fhpzc6658jsvz2yvnhkx0wf"; depends=[]; }; rchess = derive2 { name="rchess"; version="0.1"; sha256="0qnvvvwcl02rmqra9m7qnhy40cbavswbq6i0jm47x6njmr1gpfhy"; depends=[assertthat dplyr ggplot2 htmlwidgets plyr R6 V8]; }; rchie = derive2 { name="rchie"; version="1.0.2"; sha256="1m89mwq5f81yr2vc3wvnxkpm04bad11sx5fllcd3yy8ilghmbfp6"; depends=[jsonlite V8]; }; rcicr = derive2 { name="rcicr"; version="0.3.4.1"; sha256="1sa13sbhx64cf8szr2811iq4a1asb8d3k0igxw6fbssij2lwbxzp"; depends=[aspace dplyr jpeg matlab scales]; }; @@ -12414,26 +12434,25 @@ in with self; { rcitoid = derive2 { name="rcitoid"; version="0.1.0"; sha256="11iqdj1q983w28fh17rqvmhs41ks09b24p408nl7hz4iqg9c7lpi"; depends=[crul curl fauxpas jsonlite]; }; rclipboard = derive2 { name="rclipboard"; version="0.1.2"; sha256="04vkxz2wqb3q3igjqgaaim3sb71h046c2b8rhvg51hkp1win8s5w"; depends=[shiny]; }; rcmdcheck = derive2 { name="rcmdcheck"; version="1.3.3"; sha256="1d4kzgfqy72r6b7bn1j4znyksrycgypx1jjvpv9lrmvn37mpkdhs"; depends=[callr cli crayon desc digest pkgbuild prettyunits R6 rprojroot sessioninfo withr xopen]; }; - rcompanion = derive2 { name="rcompanion"; version="2.3.21"; sha256="01mvgs3q43mx630c54pc7i1kxljaliyxyv38pa6hgp4arh75aj7f"; depends=[boot coin DescTools EMT lmtest multcompView nortest plyr]; }; + rco = derive2 { name="rco"; version="1.0.1"; sha256="0sjfgblvrnd1jmvqgxc9xm94c46kmr9syxynx9zdd9gsqcwc6hza"; depends=[]; }; + rcompanion = derive2 { name="rcompanion"; version="2.3.25"; sha256="10x2ps110a849qgr7pggdz5436a2bzzfv774xic34fnpki32zvzs"; depends=[boot coin DescTools EMT lmtest multcompView nortest plyr]; }; rcoreoa = derive2 { name="rcoreoa"; version="0.3.0"; sha256="0z9kllhk1j7c4sgnd88ngxv7xvr396azg9vr9p6i72ficr7flr64"; depends=[crul hoardr jsonlite pdftools]; }; rcorpora = derive2 { name="rcorpora"; version="2.0.0"; sha256="1b8xa81mn3afadz77576vda9b0d99f1k096drxrpqd989g993aqy"; depends=[jsonlite]; }; - rcosmo = derive2 { name="rcosmo"; version="1.1.1"; sha256="195cxjgkcgz9qx51hsg9bd2y7c96dk69c8yvy9s2w59jy9iy5i7y"; depends=[cli entropy FITSio geoR mmap nnls Rcpp rgl tibble]; }; + rcosmo = derive2 { name="rcosmo"; version="1.1.2"; sha256="01a8g81ld0dy2bn0mqmpdz2bpd7g52jn67136hhvpxndnnlh384k"; depends=[cli entropy FITSio geoR mmap nnls Rcpp rgl tibble]; }; rcreds = derive2 { name="rcreds"; version="0.6.6"; sha256="1sdrdgn53kgcdnxfjs8jh0h538vb3b9ixz74lbnp54yp09jpqsri"; depends=[collectArgs digest jsonlite magrittr]; }; - rcrimeanalysis = derive2 { name="rcrimeanalysis"; version="0.1.0"; sha256="17s5k0p24vgy34gp213sxy7d7fd3fl8zyhiibszm2z81aknpszz8"; depends=[dplyr forecast ggmap htmltools igraph KernSmooth leaflet lubridate raster rgdal sp]; }; + rcrimeanalysis = derive2 { name="rcrimeanalysis"; version="0.4.1"; sha256="1nm6hsazjg9qg41067gn3qwlrbqf8awgwb2yczkzdm2106a0rm34"; depends=[dplyr forecast ggmap htmltools igraph KernSmooth leaflet leafsync lubridate pals raster Rcpp rgdal sp]; }; rcrossref = derive2 { name="rcrossref"; version="0.9.2"; sha256="1383xlwy3vj08hhghx5zsy0890zsm402x9hdqzs5x5q7mxkqdwjq"; depends=[bibtex crul dplyr DT jsonlite miniUI plyr R6 shiny stringr xml2]; }; rcrtan = derive2 { name="rcrtan"; version="0.1.1"; sha256="0kcp3gnjmp00i1hsjagpp0dlr6zgpc4y5ihpx93hm4m3fnzcmn7x"; depends=[dplyr magrittr purrrlyr tibble tidyr]; }; rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; }; rcss = derive2 { name="rcss"; version="1.8"; sha256="0c2i1zqjgl81i91b3bv70v54iib1d7hbsd1h63nip1al6lwnya4c"; depends=[nabor Rcpp RcppArmadillo]; }; rcube = derive2 { name="rcube"; version="0.5"; sha256="1162y7fs3fsbb5jj66g9kvxxhggprlifrabqbb9lqm8rrdwhz3r9"; depends=[magrittr]; }; - rcure = derive2 { name="rcure"; version="0.1.0"; sha256="1pcdc168bwn0b90xy8sdwrm2yvhj26xj11wm8z84m48sxy56j4v8"; depends=[arm MASS plyr smcure survival]; }; rcv = derive2 { name="rcv"; version="0.2.1"; sha256="0i5z3a918ykl56dv3dvzwwcv550gvjjdg5kfh63jlpaxn9ybmv3f"; depends=[dplyr readr stringr tibble tidyr]; }; - rdatacite = derive2 { name="rdatacite"; version="0.5.0"; sha256="15db4p8scx0b3br0vrxyxc0k8pfiki057vkfka3qjv1gbj1ab2d8"; depends=[crul jsonlite tibble]; }; + rdatacite = derive2 { name="rdatacite"; version="0.5.2"; sha256="07zbxr89fxx9nlp5w7n60rjm3prck08h0fjrq0pnpkbnnkx9cv9a"; depends=[crul jsonlite tibble]; }; rdataretriever = derive2 { name="rdataretriever"; version="2.0.0"; sha256="0gnvvxvlfh6j887y5w83q5kg6lqqcb0c54lfcx9qp3r28hpdlxkz"; depends=[reticulate]; }; - rdbnomics = derive2 { name="rdbnomics"; version="0.5.1"; sha256="0m55k92a74lnwfsxz6z102mvqvz6lkhwq38m000hbs5z2k27h620"; depends=[curl data_table jsonlite]; }; + rdbnomics = derive2 { name="rdbnomics"; version="0.5.2"; sha256="149ma5rvrfd1hcjm47g7yqwiildqcf0q3n70jfhd48fqgs0x30l9"; depends=[curl data_table jsonlite]; }; rdd = derive2 { name="rdd"; version="0.57"; sha256="1lpkzcjd18x51wzr4d1prdjfsw5978z6zap65psfs02nszy69nqp"; depends=[AER Formula lmtest sandwich]; }; - rddapp = derive2 { name="rddapp"; version="1.1.0"; sha256="0zdm54hlxqp7r21fwdka33syjsrf6flrvwqm86hpwhg95880ixkk"; depends=[AER Formula lmtest R_utils sandwich shiny]; }; + rddapp = derive2 { name="rddapp"; version="1.2.1"; sha256="1ypq5w6dwzkxkldj77njhzbz1daz9v3w5h92inxbiyym2bcf2prk"; depends=[AER Formula lmtest plot3D R_utils sandwich shiny sp]; }; rddensity = derive2 { name="rddensity"; version="1.0"; sha256="0v94izsghy35b33dq5b28p2lqs1fw1snyipdf9vgjz5s3qkzjkd8"; depends=[ggplot2 lpdensity]; }; - rddtools = derive2 { name="rddtools"; version="0.4.0"; sha256="1z9sl9fwsq8zs1ygmnjnh3p6h9hjkikbm4z7cdkxw66y0hxgn96s"; depends=[AER Formula ggplot2 KernSmooth lmtest locpol np rdd sandwich]; }; rde = derive2 { name="rde"; version="0.1.0"; sha256="1zw9gdh90hl0wc5c0xwl5x7566r611wk73sbqdmpzpswjyyl9aqm"; depends=[clipr]; }; rdetools = derive2 { name="rdetools"; version="1.0"; sha256="0pkl990viv7ifr7ihgdcsww93sk2wlzp2cg931wywagfp8dijd02"; depends=[]; }; rdflib = derive2 { name="rdflib"; version="0.2.3"; sha256="1hc6a0spmbd42lf7zjkwjv4glagfzsdilv5hm8c76cj36incg6qg"; depends=[dplyr jsonld readr redland stringi tidyr]; }; @@ -12441,7 +12460,7 @@ in with self; { rdhs = derive2 { name="rdhs"; version="0.6.3"; sha256="01pjb9wjad22rv85z0rxrh06wyzksy0xgd656xd3lck0ixpr88hx"; depends=[digest foreign getPass haven httr iotools jsonlite magrittr qdapRegex R6 rappdirs rgdal storr xml2]; }; rdi = derive2 { name="rdi"; version="1.0.0"; sha256="1c49mkxfyxhqz8fc155kgy1k5by0y2c1ahy8k6pn9k8l1j4m4m2q"; depends=[beanplot gplots pdist stringr]; }; rdian = derive2 { name="rdian"; version="0.1.1"; sha256="0i4ljcqhmrwrqbhi321iffypxj4kndx47ssljnixr3fx2lmqh0q1"; depends=[curl httr]; }; - rdist = derive2 { name="rdist"; version="0.0.3"; sha256="1jp3s4293h973dpz0waq9abpd8ibp4gxdyk3bwn7a32zfpk4kjza"; depends=[Rcpp RcppArmadillo]; }; + rdist = derive2 { name="rdist"; version="0.0.4"; sha256="058i2cxav96ipb1a1q3ffak0mjgyrvvcz8ivlap4qbrnn3x13jzl"; depends=[Rcpp RcppArmadillo]; }; rdiversity = derive2 { name="rdiversity"; version="1.2.1"; sha256="0j67b9mnq2xfbi2hrn1x9vgdv63779d0rcbzndljh37b1x5zlr22"; depends=[ape ggplot2 ggthemes phangorn phytools plyr reshape2 tibble tidyr]; }; rdlocrand = derive2 { name="rdlocrand"; version="0.5"; sha256="1dadb3yazk9kn051rswq3568m77x44485l2268ahm0im6bj2i7al"; depends=[AER sandwich]; }; rdmulti = derive2 { name="rdmulti"; version="0.4"; sha256="11qh5sdnxmpk1bhkcb4bq7qmj0hvvc9p4hq0pwnkgq4vfj6gsi2d"; depends=[rdrobust]; }; @@ -12454,12 +12473,12 @@ in with self; { rdrop2 = derive2 { name="rdrop2"; version="0.8.1"; sha256="1f4ysck58dm40k4wn9nfjaxym0mbgfkm146iidfkz7agmd1x0xyl"; depends=[assertive digest dplyr httr jsonlite magrittr purrr]; }; rdryad = derive2 { name="rdryad"; version="0.4.0"; sha256="19ca618hymvpk5byrrglc6iidsgm6wn43fypspssa7b3r1c4xhdc"; depends=[crul curl data_table oai solrium tibble xml2]; }; rdtLite = derive2 { name="rdtLite"; version="1.2.1"; sha256="0mm2psp8j1dfvah5d68a721kl3klins038nwgbv4s6x38a9amvq6"; depends=[curl digest ggplot2 gtools jsonlite knitr provSummarizeR provViz rmarkdown sessioninfo stringi XML]; }; - rdwd = derive2 { name="rdwd"; version="1.2.0"; sha256="1vcw5pcvcw1rx6dwwwh9j9g2pb1m81g812abd5h8zq5n7plkd2jk"; depends=[berryFunctions pbapply]; }; + rdwd = derive2 { name="rdwd"; version="1.3.1"; sha256="0pz2574rbsvg79n98ndvmhxxpk76qlq9qyv052y74871mj6dkzff"; depends=[berryFunctions pbapply]; }; rdwplus = derive2 { name="rdwplus"; version="0.1.0"; sha256="1y4dnm2bb0w6pim4h79mv2km88s78vhsn5fhs7z45m0564hgk0x2"; depends=[raster rgrass7]; }; re2r = derive2 { name="re2r"; version="0.2.0"; sha256="0xv355h4bps4a0picxmi6i15niq4knlail80fp9xvszyn72pm8gq"; depends=[htmlwidgets Rcpp RcppParallel stringi]; }; reReg = derive2 { name="reReg"; version="1.2.1"; sha256="0nfi02wlmb1n8j134qgv3p03z2j200kkrwhvd5i17ybhzpwfndri"; depends=[BB ggplot2 MASS nleqslv reda scam SQUAREM survival]; }; reactR = derive2 { name="reactR"; version="0.4.2"; sha256="11rahxskch0r5hlqs7iy285dlhrmzm4vl18kbakx4jggwjqh61f5"; depends=[htmltools]; }; - reactable = derive2 { name="reactable"; version="0.1.0"; sha256="00ydsx8g27a40qwnkp593dd9pn62r32riry9ayhv3nzqa6mwzb4d"; depends=[digest htmltools htmlwidgets jsonlite reactR]; }; + reactable = derive2 { name="reactable"; version="0.1.0.1"; sha256="0pd9l1dnkglbncr2blbrrz6np69y75rj8fsb6zcw7qm95h579nm3"; depends=[digest htmltools htmlwidgets jsonlite reactR]; }; reactlog = derive2 { name="reactlog"; version="1.0.0"; sha256="1pajxd9k208s06sava2gqip22pzwlyslnfvkbkfw47mp4wb7zmk9"; depends=[jsonlite]; }; read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; read_gb = derive2 { name="read.gb"; version="1.6"; sha256="17py6al9cwq4jmab7k2164f7hi8943gi8a50d8zpn1xms9l2cnld"; depends=[]; }; @@ -12482,9 +12501,10 @@ in with self; { readroper = derive2 { name="readroper"; version="0.9.1"; sha256="153iy144c4yxcs2cwr73czy69b4fj4q1g77rb8qmvp6blfwdcd71"; depends=[readr]; }; readsdmx = derive2 { name="readsdmx"; version="0.3.0"; sha256="188yzkjblbjly032312w0fazj7k7j4ynqfc69xpblnw4gs708sx0"; depends=[Rcpp]; }; readstata13 = derive2 { name="readstata13"; version="0.9.2"; sha256="02mqwpzn7n3pqjxivnd1vlfc47xkyiywfz594x0f6vd2dym8rdwd"; depends=[Rcpp]; }; - readtext = derive2 { name="readtext"; version="0.75"; sha256="0xbl4q3y4kzigr6rgqb04sq1xqddfzqivkjmbd0v5sfammrhla8n"; depends=[antiword data_table digest httr jsonlite pdftools readODS readxl streamR stringi striprtf tibble xml2]; }; + readtext = derive2 { name="readtext"; version="0.76"; sha256="1k79db2aay15gdb52cqd87wnwk0pn27y45c65741rk8rgddk7lwj"; depends=[antiword data_table digest httr jsonlite pdftools readODS readxl streamR stringi striprtf tibble xml2]; }; + readtextgrid = derive2 { name="readtextgrid"; version="0.1.1"; sha256="03qrbmlpbjwx4ia0ydv6m9lwzalsas9pdhds82mg5f8ir0cd0qi6"; depends=[magrittr plyr purrr readr stringr tibble]; }; readthat = derive2 { name="readthat"; version="0.0.1"; sha256="04vnpvfa8in3gxi6nv3si59hr8hj17wq3a5n8rnpiaczg46qr1dr"; depends=[curl Rcpp]; }; - readwritesqlite = derive2 { name="readwritesqlite"; version="0.0.2"; sha256="064imgjl197avdsjhqvlg9yzgsp4p4yisvk62l6arcnkixwlz086"; depends=[checkr DBI dttr2 err hms RSQLite sf tibble units]; }; + readwritesqlite = derive2 { name="readwritesqlite"; version="0.1.0"; sha256="15ahhdmrcas199ki3fl8mbdailgp0w18ki64nkq2f6sz9yyxngq1"; depends=[chk DBI hms lifecycle RSQLite tibble]; }; readxl = derive2 { name="readxl"; version="1.3.1"; sha256="15mambxr8c7k2ikdfsl1w3vxvm54dsnk0cl1qvks6iig7rql3d14"; depends=[cellranger progress Rcpp tibble]; }; readxlsb = derive2 { name="readxlsb"; version="0.1.2"; sha256="0vm1hl8rjmcly6wkq06x9q5yswcdxasdc66xgpvhvw8mf0q6rlkd"; depends=[cellranger Rcpp xml2]; }; reams = derive2 { name="reams"; version="0.1"; sha256="07hqi0y59kv5lg0nl75xy8n48zw03y5m71zx58aiig94bf3yl95c"; depends=[leaps mgcv]; }; @@ -12497,10 +12517,10 @@ in with self; { rebus_unicode = derive2 { name="rebus.unicode"; version="0.0-2"; sha256="185313wh4zpp6addfdr78pjhxzazlfwgsddwk02zrzblf4iwzjdm"; depends=[rebus_base]; }; recexcavAAR = derive2 { name="recexcavAAR"; version="0.3.0"; sha256="0b91jbgqzkgzvk658ckk639yyz1daa0xql3qgl0kzgqg68d53x20"; depends=[kriging Rcpp]; }; rechonest = derive2 { name="rechonest"; version="1.2"; sha256="0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2"; depends=[httr jsonlite RCurl]; }; - recipes = derive2 { name="recipes"; version="0.1.9"; sha256="1fmnka583sqm6v5bhxbllb4cd5xfqbf268aij2xgxiwckv3c0ynm"; depends=[dplyr generics glue gower ipred lubridate magrittr Matrix purrr rlang tibble tidyr tidyselect timeDate withr]; }; + recipes = derive2 { name="recipes"; version="0.1.10"; sha256="11f96aanrzi2v6cn49fhvf9y4cmhra63wcy6nvpv6hcfaqqmwd2g"; depends=[dplyr generics glue gower ipred lubridate magrittr Matrix purrr rlang tibble tidyr tidyselect timeDate withr]; }; reclin = derive2 { name="reclin"; version="0.1.1"; sha256="15qrdgjmclffivnljgmmipws9ks41fj4q40wnq0fk14mbv2045g2"; depends=[dplyr ldat lpSolve lvec Rcpp stringdist]; }; recluster = derive2 { name="recluster"; version="2.8"; sha256="05g8k10813zbkgja6gvgscdsjd99q124jx31whncc4awdsgk69s4"; depends=[ape cluster phangorn phytools picante vegan]; }; - recmap = derive2 { name="recmap"; version="1.0.5"; sha256="1xl2j6zjk1vyf2zz8zcl4532k0c1jkrjqhp3vndnl5ynqr5nqlph"; depends=[GA Rcpp sp]; }; + recmap = derive2 { name="recmap"; version="1.0.7"; sha256="14mqc6kzwhcsbnkpl4hy2592rxgwpcpxwawq4x0kakbdjcskbfv8"; depends=[GA Rcpp sp]; }; recoder = derive2 { name="recoder"; version="0.1"; sha256="0wh0lqp7hfd4lx2xnmszv1m932ax87k810aqxdb6liwbmvwqnfgd"; depends=[stringr]; }; recombinator = derive2 { name="recombinator"; version="1.0.1"; sha256="1dbsqig2jjp3zypcqxf9c2brb09pv6xikmh6fhz5vgxy5wkyivks"; depends=[crayon]; }; recommenderlab = derive2 { name="recommenderlab"; version="0.2-5"; sha256="1mhs7yniabpbjpq7w04jfrzng3apz2lcg5izjk8hjnl5pww684hk"; depends=[arules irlba Matrix proxy recosystem registry]; }; @@ -12513,12 +12533,11 @@ in with self; { red = derive2 { name="red"; version="1.4.0"; sha256="1z8ja8qbwgpbmy4ira9q6x482nw5rm4bksm82y0vc4gwpdxls5z3"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; }; redR = derive2 { name="redR"; version="1.0.1"; sha256="0bd1jzjip6p449m9ysi4kybxqljh2wj8z9mrgyk1cy08bjivd1cd"; depends=[imager]; }; reda = derive2 { name="reda"; version="0.5.0"; sha256="05lbhamd8z0bhc7cvpd24nmgsc5lfzidjynbi0dzbvkn2gphpdzs"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; - redcapAPI = derive2 { name="redcapAPI"; version="2.2"; sha256="0bszw9px7ddcwnc1p3zpd8426mwym5369hglz3qm5x92va1j4036"; depends=[checkmate chron DBI httr labelVector lubridate readr stringr tidyr]; }; + redcapAPI = derive2 { name="redcapAPI"; version="2.3"; sha256="1myycwdrlw1405fxc82zd8ps8bhdvf2ffsb91pia5ijf6952v8pf"; depends=[checkmate chron DBI httr labelVector lubridate readr stringr tidyr]; }; reddPrec = derive2 { name="reddPrec"; version="0.4.0"; sha256="0zmkaiivvjq8mcaz310zgjjc7y0wgsqv29bf8nhli5qawaczvb9a"; depends=[fields snowfall]; }; redist = derive2 { name="redist"; version="1.3-3"; sha256="18asjam8hvayvnfysyjzbazjn27ds7163qhdq0p9aqlx03v89aa9"; depends=[coda doParallel foreach Rcpp RcppArmadillo sp spdep]; }; redland = derive2 { name="redland"; version="1.0.17-11"; sha256="1xbzz6iv4yal1gwplnb9d4z0xzrv25hnqmr6ima2aq9mirwr1l5b"; depends=[roxygen2]; }; redlistr = derive2 { name="redlistr"; version="1.0.3"; sha256="003jxfmj1gryw77vnrvaxmpvjbshlq53wgcrj02mcywfcqzg4jcr"; depends=[plyr raster rgeos sp]; }; - redshiftTools = derive2 { name="redshiftTools"; version="1.0.1"; sha256="0rg9s9i7cdy2qm45bpm50d7859pqx1kmk4m8gpazkp0kgr7alb7l"; depends=[aws_s3 DBI progress purrr]; }; redux = derive2 { name="redux"; version="1.1.0"; sha256="0a551w7fph338mqzxda6y21lsad19dway7w18jw9cv1rgvcp9nvc"; depends=[R6 storr]; }; ref_ICAR = derive2 { name="ref.ICAR"; version="1.0"; sha256="0k6czsbjclgmi7vp5hl50jghkzm573s50993iz3dcv55mv662251"; depends=[coda MCMCglmm mvtnorm Rdpack rgdal spdep]; }; referenceIntervals = derive2 { name="referenceIntervals"; version="1.1.1"; sha256="04199nxh216msaghkp66zsi96h76a7c42ldml0fm66v2vamcslg8"; depends=[boot car extremevalues outliers]; }; @@ -12529,31 +12548,31 @@ in with self; { refund = derive2 { name="refund"; version="0.1-21"; sha256="09lbiyr642c3mgdgcy0j5j64s8k7nai4x7grzlh93apkaj8yrm44"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix mgcv nlme pbs RLRsim]; }; refund_shiny = derive2 { name="refund.shiny"; version="0.3.0"; sha256="0r2xrm4wz35wn9zg4vvw2ysl7zzbz9i080vnbrlp4yrhhlkhpkm1"; depends=[dplyr ggplot2 gridExtra lme4 plotly refund reshape2 shiny tidyr]; }; regRSM = derive2 { name="regRSM"; version="0.5"; sha256="0nbp3yjk9r7qvwm7wla39155rmqnvpdb720iq3b0hcy1bbsxbk9s"; depends=[doParallel foreach Rmpi]; }; - regclass = derive2 { name="regclass"; version="1.5"; sha256="0kha9b5ki55ggwh8cmlphg1alf1dq8if5dknisfbvd3f2x4dqf02"; depends=[bestglm leaps randomForest rpart rpart_plot VGAM]; }; + regclass = derive2 { name="regclass"; version="1.6"; sha256="0m974k3yhf0dgv5f1qjs8c53mam0cll3cjn35ywfrmlfla0wlhf5"; depends=[bestglm leaps randomForest rpart rpart_plot VGAM]; }; regexPipes = derive2 { name="regexPipes"; version="0.0.1"; sha256="1hk0rhvmgzcyf5cyl8hjznl3ll25kpasqikfr6nxd6ian2slvmmb"; depends=[]; }; regexSelect = derive2 { name="regexSelect"; version="1.0.0"; sha256="0xnb9qa8l63ang4r40ky4qhlrs5mbzvmj98dgij26j3mq1ys1pa7"; depends=[shiny shinyjs]; }; - reghelper = derive2 { name="reghelper"; version="0.3.4"; sha256="03ddpa8dhvdsqv0fnbaai4rvblqcr8x6r9z42ljm166pnx5h0spk"; depends=[ggplot2 lme4 nlme]; }; + reghelper = derive2 { name="reghelper"; version="0.3.5"; sha256="1max91968w5ijnvi4pqhnvzcqj1dxw41cifzgf5mjg63ylpxsarx"; depends=[ggplot2 lme4 nlme]; }; + registr = derive2 { name="registr"; version="1.0.0"; sha256="1ysj2ab69w6g71d1kpcwyq0py71w6h7lfhk4nzgn2dhh6k8whwbn"; depends=[dplyr ggplot2 gridExtra magrittr Rcpp RcppArmadillo tidyr]; }; registry = derive2 { name="registry"; version="0.5-1"; sha256="1k3j6dx350awamr0dwwgkhfs46vsnj4nf08iw5byq0x7n3nkdsnz"; depends=[]; }; reglogit = derive2 { name="reglogit"; version="1.2-6"; sha256="1nnn8n5sqhbd3nzmwnpmcsmaxxxaqwbna7xm7q9vk4cqz9cm9b9s"; depends=[boot Matrix mvtnorm]; }; regnet = derive2 { name="regnet"; version="0.4.0"; sha256="0qb7sp464fyxn0bslkapjni3pzk7l6fdgabfbzja08flsr63r4mh"; depends=[glmnet Rcpp RcppArmadillo]; }; - regplot = derive2 { name="regplot"; version="0.2"; sha256="0j2mra5fqcixyl4wqwpzfng98rdh4xnl79ka7ilfi0jvz2jix84x"; depends=[beanplot sm survival vioplot]; }; + regplot = derive2 { name="regplot"; version="1.0"; sha256="0v24qg6nhzxxsdgrj0s14djmmhjdbl0bd0aqb5vklvmvf3r76li4"; depends=[beanplot lme4 sm survival vioplot]; }; regpro = derive2 { name="regpro"; version="0.1.1"; sha256="02axbq63hsqwg3q2ixr0lpsdai9q6wj57s5k1343q9m0pw90vr73"; depends=[denpro]; }; - regress = derive2 { name="regress"; version="1.3-15"; sha256="1cgr0r49cmr8nzs2lr2cm8lli1i8azyas0lbnf1681kyab15c0r7"; depends=[]; }; regressoR = derive2 { name="regressoR"; version="1.1.8"; sha256="1a8whcr32sjv6lncch8y1n7xs44djm3nx90lpvh8z8r5ggc8bw21"; depends=[colourpicker corrplot dplyr DT e1071 flexdashboard gbm ggplot2 glmnet htmltools kknn neuralnet pls randomForest rattle ROCR rpart shiny shinyAce shinydashboardPlus shinyjs shinyWidgets xgboost zip]; }; - regrrr = derive2 { name="regrrr"; version="0.1.0"; sha256="0h9vag1ypf5ycvz5fbfvw4nh4l8dgn2kmsgzq9kmn7hw2qsjwbbl"; depends=[dplyr ggplot2 magrittr MuMIn purrr rlang robustbase scales spatstat stringr tidyr usdm]; }; - regsem = derive2 { name="regsem"; version="1.3.9"; sha256="1klml4bp76mplipxaca7fk653cjxgdmmiciksxgiglxkzmf2bdps"; depends=[lavaan Rcpp RcppArmadillo Rsolnp]; }; + regrrr = derive2 { name="regrrr"; version="0.1.1"; sha256="1ibmfxw0akkrz4r0fipfqbbw4153cghj8k2xsy73lgw799ybylfk"; depends=[dplyr ggplot2 lspline magrittr MuMIn purrr robustbase scales stringr tidyr usdm]; }; + regsem = derive2 { name="regsem"; version="1.5.2"; sha256="0ch057010xfsw0nqcsarzakdbiplvxaldyqlbbacspqs65ax1yk7"; depends=[lavaan Rcpp RcppArmadillo Rsolnp]; }; regspec = derive2 { name="regspec"; version="2.4"; sha256="18i6k2wqaddrc0dz7v8x3s9205dcfwanqhpnxa9hkpyqzbb17pd3"; depends=[]; }; regsubseq = derive2 { name="regsubseq"; version="0.12"; sha256="0879r4r8kpr8jd6a3fa9cifm7cv0sqzz8z1alkm1b2fr1625md3g"; depends=[]; }; regtest = derive2 { name="regtest"; version="0.05"; sha256="1wrrpp2hvkas0yc512gya3pvd0v97pn4v51k5jxkwyd1pp68zd1q"; depends=[]; }; regtools = derive2 { name="regtools"; version="1.1.0"; sha256="1kia4h4bwjjfq7jm57ihdgspbqfn683ssbzngp5r069ki931h3nb"; depends=[dummies FNN mvtnorm sandwich]; }; - rehh = derive2 { name="rehh"; version="3.0.1"; sha256="061nk9xmlbllisszpscfpa95653745v645jm3qls1cp42d73rz6k"; depends=[rehh_data]; }; + rehh = derive2 { name="rehh"; version="3.1.0"; sha256="0lxy45cwq98kijzvp8dwf8khwcpqjvp6mjbim9hjzhwvm5jklji4"; depends=[rehh_data]; }; rehh_data = derive2 { name="rehh.data"; version="1.0.0"; sha256="1jkvwmnnmfa7iyvrabgcfzw3vfzx0dlgq47s6yf4zayi437v4di0"; depends=[]; }; rehydratoR = derive2 { name="rehydratoR"; version="0.5.2"; sha256="1d94m9hv1l72l9lph2vzbq4qqbfcgyhv2qk82p9vb8l2ckavjzvv"; depends=[dplyr jsonlite rtweet tibble]; }; reinforcedPred = derive2 { name="reinforcedPred"; version="0.1.1"; sha256="0lf3lznzvckqg04446pvq35p31fv9ix93rxwv51zq9azk0sx42vs"; depends=[glmnet MASS refund]; }; reinforcelearn = derive2 { name="reinforcelearn"; version="0.2.1"; sha256="176z2q69p24i29a8sh19xxn2zl3h1z2ixdssr5i6m4yvkvdrvv3b"; depends=[checkmate nnet purrr R6]; }; reinstallr = derive2 { name="reinstallr"; version="0.1.4"; sha256="1fcmy2cyqy4zwh815j2jbmziaiq6kypwsnj5bx0f10dlq3522m5q"; depends=[]; }; reinsureR = derive2 { name="reinsureR"; version="0.1.0"; sha256="19ayikzcq6z4i7xrlby76yy2nwvrsv6xdfrmvzyr7rz934flh8kd"; depends=[data_table dplyr ggplot2 viridis viridisLite]; }; - rel = derive2 { name="rel"; version="1.4.0"; sha256="1aswhbb5rfda1bfrasxjj5z6f9fxl7x9m9xcg0x3nvnj4qbfamfp"; depends=[]; }; + rel = derive2 { name="rel"; version="1.4.2"; sha256="0h0146b8pnd7ai17y58agsk9kaym7fhiagl34gggaak0j1qa32wh"; depends=[]; }; relMix = derive2 { name="relMix"; version="1.3"; sha256="0saa4gz4mghg15cbbx5y933vp41j94cdzvgkc112632dbp20bqd9"; depends=[Familias gWidgets gWidgetstcltk tkrplot]; }; relSim = derive2 { name="relSim"; version="0.3-1"; sha256="1d6yihapfyjlfw87l370wyfyby7ivvykx04qljffdv3hi801gn7f"; depends=[multicool Rcpp rvest stringr xml2 xtable]; }; rela = derive2 { name="rela"; version="4.1"; sha256="00ksm7zh1mpd2d5c5d823id3sxj0h3x0ccg6a40fadibvr1ay3ny"; depends=[]; }; @@ -12577,11 +12596,11 @@ in with self; { remindR = derive2 { name="remindR"; version="0.0.1"; sha256="0b27v2qm3z8l9vcng8f0rkphjidxkw5n017ysflx180qjizqq632"; depends=[assertthat]; }; remote = derive2 { name="remote"; version="1.2.1"; sha256="1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w"; depends=[gridExtra latticeExtra mapdata raster Rcpp scales]; }; remoter = derive2 { name="remoter"; version="0.4-0"; sha256="1a7m63l8phv5jnazvdqdrqkaqjwqzaac5y4jm2jn0ypy4n8jvkfl"; depends=[argon2 getPass pbdZMQ png]; }; - remotes = derive2 { name="remotes"; version="2.1.0"; sha256="19v8dmnk9l4i9m64p7zgmj7y1vhnnwhi5kyn0k5d034zzkvchi49"; depends=[]; }; + remotes = derive2 { name="remotes"; version="2.1.1"; sha256="12qinl7jv54f2524ri13gcrv6d523rg1harpi500j676zi30fnaf"; depends=[]; }; remss = derive2 { name="remss"; version="1.0.0"; sha256="0dl7iqg65qgafq7s1srcymqzvplkpzplpn6g68lb1mqirqzvgpqw"; depends=[survival]; }; renpow = derive2 { name="renpow"; version="0.1-1"; sha256="0kbfpzr17fvf5zzxpzdhvfmrqmlkba2w3rzxl5q5ac1w3h75gfhc"; depends=[]; }; rentrez = derive2 { name="rentrez"; version="1.2.2"; sha256="0ghrvh1czf2kbz7p5fh5c20wiwppg6x6fdns247fvlh6zmjl5jz5"; depends=[httr jsonlite XML]; }; - renv = derive2 { name="renv"; version="0.9.2"; sha256="1jwnabryn77s29ybwdfzlnd7c8m05xmi69kp5qbvdxy2gjwjzcdr"; depends=[]; }; + renv = derive2 { name="renv"; version="0.9.3"; sha256="02ayfgbpw4b58148dcxz31anaxncwczmxs1zzkskwj0rzhb2x60r"; depends=[]; }; repeated = derive2 { name="repeated"; version="1.1.2"; sha256="19kcsj96i1zpnwfan3gz5vrzc2gqlah0wrdr9vb4vvacz45wcdfq"; depends=[rmutil]; }; repec = derive2 { name="repec"; version="0.1.0"; sha256="0alr9fbmfxmnnnn1qymy65crcycynwz435jj0vangbb4p0qhv8pm"; depends=[jsonlite]; }; repfdr = derive2 { name="repfdr"; version="1.2.3"; sha256="0jpk44arg1jib0h2w90h851bs5cd1ss32fab9bfvf9iir2jk8985"; depends=[Rcpp]; }; @@ -12589,27 +12608,26 @@ in with self; { replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-2"; sha256="0nskwkqm9z2aphpim6pvykhc3fphlsbap3r49nghkwjpngd0qzj8"; depends=[spatstat spatstat_utils]; }; replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; }; repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; }; - repo = derive2 { name="repo"; version="2.1.4"; sha256="0492jh20aknabjlw6k32bq11vc6gvypahplxmg6slpgfi15zkqg5"; depends=[digest]; }; + repo = derive2 { name="repo"; version="2.1.5"; sha256="13gdka37kbs4mp16pf65bh28f0dkyalrcrdik6lc67jw8r9h94f9"; depends=[digest]; }; repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; }; reportROC = derive2 { name="reportROC"; version="3.4"; sha256="1gcck5ids0prrrbv4hqi76swxjhbx796p4qlxbf63ys3gvdzanxr"; depends=[pROC]; }; reportReg = derive2 { name="reportReg"; version="0.3.0"; sha256="0qwrpn61x69hmgln5fpc58dqfa3pba0lgjjyj0f3fh96wc9jyhq1"; depends=[nlme]; }; - reportRx = derive2 { name="reportRx"; version="1.0"; sha256="0npiflql0lq8sqp6xgydxbw7xdr0zdxj1s2h4bnpmn4clc05r7m4"; depends=[aod cmprsk geoR reshape stringr survival xtable]; }; reportr = derive2 { name="reportr"; version="1.3.0"; sha256="0zynplxqvbmf23cm2rsz3wz2jx6mv55z94mn1k44ny3lx625cnpw"; depends=[ore]; }; reports = derive2 { name="reports"; version="0.1.4"; sha256="0r74fjmdqax2x5fhbkdxb8gsvzi6v794fh81x4la9davz6w1fnxh"; depends=[]; }; reporttools = derive2 { name="reporttools"; version="1.1.2"; sha256="1i87xmp7zchcb8w8g7nypid06l2439qyrvpwsjz6qny954w6fa2b"; depends=[xtable]; }; - repr = derive2 { name="repr"; version="1.0.2"; sha256="0wn9fdddqjgn0bdfl75x89rcxahbgqs324bhg0pfq6va5q2mlbbw"; depends=[base64enc htmltools jsonlite pillar]; }; + repr = derive2 { name="repr"; version="1.1.0"; sha256="15jz780w4nd9qjd1g3gq8f5lkh60p2v3ig3hm5kl1rg3z4cf0gvl"; depends=[base64enc htmltools jsonlite pillar]; }; represent = derive2 { name="represent"; version="1.0"; sha256="0jvb40i6r1bh9ysfqwsj7s1g933d7z5fq9d618yjrqr6hbbqsvac"; depends=[]; }; represtools = derive2 { name="represtools"; version="0.1.3"; sha256="00hnvzkkcl9d3k115i5l9gs0wah5d11amn7q62m1j158lkqlcfza"; depends=[whisker]; }; reprex = derive2 { name="reprex"; version="0.3.0"; sha256="0v7vxzs8alwz8y1cjicpimp5yimf1g9gb8x5wy3zhvrz6kk2lg10"; depends=[callr clipr fs rlang rmarkdown whisker withr]; }; reproducer = derive2 { name="reproducer"; version="0.3.1"; sha256="0clgbwfv24fjx6hj0km1nwy508dqbga8q8lyzqg801yrr8gidizd"; depends=[dplyr GetoptLong ggplot2 gridExtra httr jsonlite lme4 MASS metafor openxlsx readr reshape stringr tibble tidyr xtable]; }; - reproducible = derive2 { name="reproducible"; version="0.2.11"; sha256="08pjmhhcgcrnrr8w6sdc3phz2ymp2b7gml0848f384blqkg9wavj"; depends=[archivist backports crayon data_table digest dplyr fastdigest fasterize fpCompare gdalUtils git2r googledrive httr magrittr memoise quickPlot R_utils raster RCurl remotes rgdal rgeos rlang sf sp testthat versions]; }; + reproducible = derive2 { name="reproducible"; version="1.0.0"; sha256="1zcxdvh3x1h0jcxcv62syl0midj2kk264vkanjj2bfhn4jbbbymi"; depends=[backports crayon data_table DBI digest fastdigest fpCompare gdalUtils glue googledrive httr magrittr memoise qs quickPlot R_utils raster remotes rgdal rlang RSQLite sf sp testthat versions]; }; reproj = derive2 { name="reproj"; version="0.4.0"; sha256="0liwv4sgxdm42vyykjyc3jihcxk3b5q0d7cwgai8349nn1ah0wdh"; depends=[proj4 tibble]; }; repurrrsive = derive2 { name="repurrrsive"; version="1.0.0"; sha256="1nmy88h2bfv2bad282kbrmnkjx9d8klgzv4mm8nspm049s09ydmz"; depends=[tibble]; }; reqres = derive2 { name="reqres"; version="0.2.3"; sha256="0dly09h8dpjlmvrd1wfg1gqcqhm03ax97qr0nd1p0fg9y0pdapya"; depends=[assertthat brotli jsonlite R6 stringi urltools webutils xml2]; }; request = derive2 { name="request"; version="0.1.0"; sha256="1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh"; depends=[curl httr jsonlite lazyeval magrittr R6 whisker]; }; requireR = derive2 { name="requireR"; version="1.0.0.1"; sha256="192l7i3q7s2a6n737an3fn258agjsdzh0q2w0vc8jbz7v4f3i92d"; depends=[]; }; rerddap = derive2 { name="rerddap"; version="0.6.5"; sha256="1pmpf9jdgp71ganzslwlp5qhkxhy7snaxgbrrym7swx6v2jnwhmv"; depends=[crul data_table digest dplyr hoardr jsonlite ncdf4 tibble xml2]; }; - rerddapXtracto = derive2 { name="rerddapXtracto"; version="0.4.6"; sha256="0akqprias7lxkg927yjdwcs7311rqjgnn5286g9r9rw813slc7vk"; depends=[abind dplyr ggplot2 httr maps ncdf4 parsedate plotdap readr rerddap sf sp]; }; + rerddapXtracto = derive2 { name="rerddapXtracto"; version="0.4.7"; sha256="0k4yfiyn16cf7msiy6lhfbf4s5fkfl8ddxgpi72w2kj61p6phcfv"; depends=[abind dplyr ggplot2 httr maps ncdf4 parsedate plotdap readr rerddap sf sp]; }; rerf = derive2 { name="rerf"; version="2.0.4"; sha256="0ykgxdmkqapdpk5zwi8h1cbsvjv6jpscqpr5cjmdzdan22m09l6k"; depends=[dummies mclust Rcpp RcppArmadillo RcppZiggurat]; }; resample = derive2 { name="resample"; version="0.4"; sha256="1rckzm2p0rkf42isc47x72j17xqrg8b7jpc440kn24mqw4szgmgh"; depends=[]; }; resampledata = derive2 { name="resampledata"; version="0.3.1"; sha256="1nxjqvxxvycccmh1n7lpc4k8zmwnciicfr5rzfid1icij5fzw3ak"; depends=[]; }; @@ -12620,13 +12638,13 @@ in with self; { reshape2 = derive2 { name="reshape2"; version="1.4.3"; sha256="03ki5ka1dj208fc0dclbm0b4xp9d769pah2j9cs34l776p4r9zwa"; depends=[plyr Rcpp stringr]; }; reshapeGUI = derive2 { name="reshapeGUI"; version="0.1.0"; sha256="0kb57isws8gw0nlr6v9lg06c8000hqw0fvhfjsjyf8w6zwbbq3zs"; depends=[gWidgets gWidgetsRGtk2 plyr reshape2]; }; respirometry = derive2 { name="respirometry"; version="1.0.2"; sha256="10dfy1xx2214x4lk0nxxi8c2h8j47gd8w004ic016j3m7a1vp3jd"; depends=[birk lubridate marelac measurements minpack_lm PKNCA seacarb segmented]; }; - restatapi = derive2 { name="restatapi"; version="0.6.2"; sha256="0mp5bd867w669w6219296ymzqn35nd306yfjb5pbi03sirqmk4lr"; depends=[data_table rjson xml2]; }; + restatapi = derive2 { name="restatapi"; version="0.7.5"; sha256="0a55k96qf807z9l8zgbpb849nm8c5iv42q7a6xm8sf2495p2jlr5"; depends=[data_table rjson xml2]; }; restfulr = derive2 { name="restfulr"; version="0.0.13"; sha256="1dk45mzrr6ka92yjz7hfhkj12kpx1wg4szv1h1mg80mgga4ganbv"; depends=[RCurl rjson S4Vectors XML yaml]; }; restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; }; restlos = derive2 { name="restlos"; version="0.2-2"; sha256="083w1ldax8bnf3w4119damma2nz75c3ki187b0275i1mqxqrixp7"; depends=[geometry igraph limSolve rgl som]; }; restorepoint = derive2 { name="restorepoint"; version="0.2"; sha256="0pjp5dvycvfg75hhj8lrr2lrjn6n6bqj0ziwyd87lyi15b9j8w4s"; depends=[]; }; restrictedMVN = derive2 { name="restrictedMVN"; version="1.0"; sha256="0qynkg244gzq0yjb0716w7g1sxdq66i11ss8jij86h2mz3ykj137"; depends=[MASS]; }; - restriktor = derive2 { name="restriktor"; version="0.2-500"; sha256="14p66ckr8lyjl905y0wkqz6s8a0gsy7z6ndkpigwbzssq27jn0am"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; + restriktor = derive2 { name="restriktor"; version="0.2-800"; sha256="0v7304912xhjz5bsngndvwi0y1qnk55xk9ariw2wi9msah1nm4d9"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; resumer = derive2 { name="resumer"; version="0.0.3"; sha256="0ilya3v75989zqm16x69w4599ax2s5j2n6f16bmhwydrmzxs1g48"; depends=[dplyr rmarkdown useful]; }; rethinker = derive2 { name="rethinker"; version="1.1.0"; sha256="02zfx08s5xisv1v4y16iqbddi9kb3fcr249b3414fzvs4nm5as94"; depends=[rjson]; }; reticulate = derive2 { name="reticulate"; version="1.14"; sha256="0icb9zl9zlx75njv7y1dr450k0yw2n3q2jkr4nicnphdyfn69gkn"; depends=[jsonlite Matrix rappdirs Rcpp]; }; @@ -12647,10 +12665,10 @@ in with self; { reweight = derive2 { name="reweight"; version="1.2.1"; sha256="0fv7q1zb3f4vplg3b5ykb1ydwbzmiajgd1ihrxl732ll8rkkfa4v"; depends=[]; }; rex = derive2 { name="rex"; version="1.1.2"; sha256="0alsadgjgass3wr8y5d247j12qqzg454sc84vpskclrkmz778g5x"; depends=[lazyeval magrittr]; }; rexpokit = derive2 { name="rexpokit"; version="0.26.6.6"; sha256="13dxra3s68i499g21z9i93mbn6n8s4xay5zmvslafaccbq3q1ray"; depends=[Rcpp]; }; - rfPermute = derive2 { name="rfPermute"; version="2.1.7"; sha256="0dhgxm9b2djgadr1wnwgd0gbqv7751y0ln4jis32p0qmwi30v76d"; depends=[abind dplyr ggplot2 gridExtra magrittr plyr randomForest reshape2 rlang scales swfscMisc tibble tidyr]; }; + rfPermute = derive2 { name="rfPermute"; version="2.1.81"; sha256="0mak4r3j5vbjjkcsbxj0yg2xrbipq4rz873b02drkb769nh3d16a"; depends=[abind dplyr ggplot2 gridExtra magrittr randomForest rlang scales swfscMisc tibble tidyr]; }; rfUtilities = derive2 { name="rfUtilities"; version="2.1-5"; sha256="1anwvmxn3xrc1aqxl75rzlk4wby8l54rmkp0bgi8dgbz2l223xr0"; depends=[cluster randomForest]; }; rfVarImpOOB = derive2 { name="rfVarImpOOB"; version="1.0"; sha256="1341bicd65qw3pz1j8d6c9baj9d6s70ljdaaf87xvx8pjnajrfsw"; depends=[binaryLogic dplyr ggplot2 ggpubr magrittr prob randomForest titanic]; }; - rfacebookstat = derive2 { name="rfacebookstat"; version="2.0.0"; sha256="07mchcma7ab3wvz6rp1zmcfqn7bnd6w1w3jrsq22v851nzvw39jk"; depends=[dplyr httr jsonlite purrr stringr tidyr tidyselect]; }; + rfacebookstat = derive2 { name="rfacebookstat"; version="2.0.1"; sha256="116igd2xfrk7hqvdvwbah0f20mandv54b8jg0z2i92igppb22n99"; depends=[dplyr httr jsonlite purrr stringr tidyr tidyselect]; }; rfbCNPJ = derive2 { name="rfbCNPJ"; version="0.1.1"; sha256="0zvpazxi184ia2wql0120kw7665dn9cs8a2kv91n79pncabb4xfg"; depends=[fs glue httr magrittr progress purrr readr stringr tibble xml2]; }; rfigshare = derive2 { name="rfigshare"; version="0.3.7"; sha256="1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq"; depends=[ggplot2 httpuv httr plyr RJSONIO XML yaml]; }; rfinterval = derive2 { name="rfinterval"; version="1.0.0"; sha256="1z7v0sbql6g2h3fr1268nj79rbx1d33hjfaraxhbikrjgb8mbp0w"; depends=[MASS ranger]; }; @@ -12666,20 +12684,21 @@ in with self; { rforensicbatwing = derive2 { name="rforensicbatwing"; version="1.3.1"; sha256="1i521h2nmlkhcxfxqir8jfjv0llwr6cz0ck5w6hzplk48044bn16"; depends=[Rcpp]; }; rfviz = derive2 { name="rfviz"; version="1.0.0"; sha256="0rzyy7r2ybqjnp1g5bbkxydpa93h8q4r71kdaj77r475m2i4kb6b"; depends=[loon randomForest]; }; rgabriel = derive2 { name="rgabriel"; version="0.7"; sha256="1c6awfppm1gqg7rm3551k6wyhqvjpyidqikjisg2p2kkhmyfkyzx"; depends=[]; }; - rgbif = derive2 { name="rgbif"; version="1.4.0"; sha256="00ik9aab13zq6n5r7sa8199nczrxb77xcf9j5bn2v8x0b7kyj4l9"; depends=[crul data_table geoaxe ggplot2 jsonlite lazyeval magrittr oai tibble whisker wicket xml2]; }; + rgbif = derive2 { name="rgbif"; version="2.2.0"; sha256="143ais0zviz015yzqax3jx47g277h9kfybwsaapgzadhap7paaja"; depends=[crul data_table geoaxe ggplot2 jsonlite lazyeval magrittr oai tibble whisker wicket xml2]; }; rgdal = derive2 { name="rgdal"; version="1.4-8"; sha256="1jd691amf3ghznq5im15gvhl6v6k25klpl75m4ngrqf9xlxaa3as"; depends=[sp]; }; rgdax = derive2 { name="rgdax"; version="1.0.0"; sha256="16ph6n1nyl2v2w51ih6wzkpw0j0hfa3f60q1g6p9zis59j0rh7d9"; depends=[digest httr jsonlite RCurl]; }; rgen = derive2 { name="rgen"; version="0.0.1"; sha256="0gl82v09q1ha58wd1014s46wzkx1yf348bc7jkl6s4qdc6c4vsb8"; depends=[]; }; rgenoud = derive2 { name="rgenoud"; version="5.8-3.0"; sha256="0p93wf6ghgz2nifxbscb6bhahh5jd2ba7nh1c2mb6fmbxnsi3swv"; depends=[]; }; rgeolocate = derive2 { name="rgeolocate"; version="1.0.1"; sha256="1v9kd71wpxna1war0rbp91pc5wdqlganmj2c2fc5m5176dnxd2v3"; depends=[httr Rcpp]; }; - rgeopat2 = derive2 { name="rgeopat2"; version="0.2.6"; sha256="04r8q3mig7sp38f3m9g20xlb0h046c04hhrzg4n06b5wkn7298s5"; depends=[readr sf stringr]; }; + rgeopat2 = derive2 { name="rgeopat2"; version="0.3.9"; sha256="0l0sqkvjkzp4lmyk55l7zc02y04sa43cps47005gq8c38kyks45k"; depends=[readr sf stringr]; }; rgeoprofile = derive2 { name="rgeoprofile"; version="0.1.1"; sha256="0frpipmmhywbahcyj5rhypp9qxqkp6xkdj6sn8w1ipw6gv02zp7b"; depends=[aspace geosphere leaflet pals RANN raster sp splancs]; }; rgeos = derive2 { name="rgeos"; version="0.5-2"; sha256="0ajrrxfwfp184c6rnby3dq54hzp3rrx3px72dn7gbdn6c4li2bqz"; depends=[sp]; }; + rgexf = derive2 { name="rgexf"; version="0.16.0"; sha256="1vj5ha1qx0xzflchxf25ycys6clfn9y32m1717afzkvhmkwisrra"; depends=[igraph servr XML]; }; rggobi = derive2 { name="rggobi"; version="2.1.22"; sha256="1g7k4xais9xkjlbvrkadr5d6c5rw4jp9c0gljhm71pa1fc9fcqff"; depends=[RGtk2]; }; - rgl = derive2 { name="rgl"; version="0.100.30"; sha256="0rzqzskcwf2ah4yr62x5rjwf7yh90d43h39gk7jmfc5lc08zaxc5"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr manipulateWidget shiny]; }; + rgl = derive2 { name="rgl"; version="0.100.50"; sha256="165p932ml7dpjkm41zc47p5cdxar69il0m5yvg0avi8q01vr17ay"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr manipulateWidget shiny]; }; rglobi = derive2 { name="rglobi"; version="0.2.21"; sha256="12v6g1ja4rrw0vcrrzgd1llxfk64g9z4f0c90rkbd9cknvnn0id9"; depends=[curl RCurl readr rjson]; }; rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; }; - rgoogleslides = derive2 { name="rgoogleslides"; version="0.3.1"; sha256="06i1ljrib0ap87bxlbpnvx5fr05pwzcmza48gbicvg7fwhz9hs05"; depends=[assertthat httr jsonlite R6]; }; + rgoogleslides = derive2 { name="rgoogleslides"; version="0.3.2"; sha256="0h9gws1vcf0zdd21d8b65c2yz9kxppp3218h5lhd5iz879ajwa2i"; depends=[assertthat httr jsonlite R6]; }; rgr = derive2 { name="rgr"; version="1.1.15"; sha256="1mrnmbh2crhkwdi37q59hx76afvkhgzgaacg3688q7jp23d58z6x"; depends=[fastICA MASS]; }; rgrass7 = derive2 { name="rgrass7"; version="0.2-1"; sha256="0rhizda58hmglgr4aq6sr5y11y615w0pwpgdk3mylm9pjgj5i5vn"; depends=[XML]; }; rgsp = derive2 { name="rgsp"; version="0.2.0"; sha256="1fk0k479srfr0f4a5abyzcrzwy9hr1v5xf0jgs36fbim9bh7njlc"; depends=[dplyr magrittr tibble]; }; @@ -12696,8 +12715,10 @@ in with self; { rhymer = derive2 { name="rhymer"; version="1.0.0"; sha256="1k15sd5q6a1ijayl585vc54d1zs4nyrxsfck9bn4nlfdiwc5arwf"; depends=[httr jsonlite]; }; ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; }; ri2 = derive2 { name="ri2"; version="0.1.2"; sha256="0z6mbhrda7fh7a4y2kx3mf1zc1p0k4d76phw3187w50kwvkpb737"; depends=[estimatr generics ggplot2 pbapply randomizr]; }; - ribd = derive2 { name="ribd"; version="1.0.0"; sha256="1r3w8zfihs5i1al0g136319zaj2dr0x52s3spxrcvd0irq9r4v8b"; depends=[glue kinship2 pedtools slam]; }; - riceidconverter = derive2 { name="riceidconverter"; version="1.0.6"; sha256="1p3dzlvsbf51igmq3m3m9vy023l9ybi81zdqbcqmbpa581zlg52x"; depends=[dplyr]; }; + ribd = derive2 { name="ribd"; version="1.0.1"; sha256="0q1i2bs219iwqg2hlabbwmpcnsjfx1i0y31dy7pgirl5264w24xz"; depends=[glue kinship2 pedtools slam]; }; + ribiosUtils = derive2 { name="ribiosUtils"; version="1.5-6"; sha256="1cfkzqbscj01pjqw7yjqf8gnvjacb13y8fc7nax4cb7gnk4fadc2"; depends=[]; }; + ricegeneann = derive2 { name="ricegeneann"; version="1.0.2"; sha256="0wxqp4pfdhvq4mwzjrqi3m9jiayk5bp1ha222mpm4qz1pl41cy9w"; depends=[riceidconverter]; }; + riceidconverter = derive2 { name="riceidconverter"; version="1.1.1"; sha256="143f76v3k2q9ddcxf2nzvd04pjgy7p120ln0zkmxpal20c81dwq6"; depends=[dplyr]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; ridge = derive2 { name="ridge"; version="2.4"; sha256="18a16653k850sfxw9rmk4spy44hn93i97b2a0jfx41qh43hmkgqy"; depends=[]; }; @@ -12717,7 +12738,7 @@ in with self; { riskParityPortfolio = derive2 { name="riskParityPortfolio"; version="0.2.1"; sha256="0l51spflm7wwwz5yrkw1i5534d1840wyyh2w3mz8apaxac76l0xz"; depends=[alabama Matrix nloptr quadprog Rcpp RcppEigen]; }; riskPredictClustData = derive2 { name="riskPredictClustData"; version="0.2.6"; sha256="0mvy9299pg374gvvqs9lmj2j0f3bzyy279kjpz7jq35hkgz5wif3"; depends=[gee Hmisc MASS mvtnorm]; }; riskR = derive2 { name="riskR"; version="1.1"; sha256="1qadfyb07idfw0bs006kb3917rzda83di6jmsr22941gv78z1wyv"; depends=[]; }; - riskRegression = derive2 { name="riskRegression"; version="2019.11.03"; sha256="15mz89cdzd6pjrlf61qs6vlcwx10rqxmz8ggpynyclhm9327skbb"; depends=[cmprsk data_table doParallel foreach ggplot2 lattice lava plotrix prodlim ranger Rcpp RcppArmadillo rms survival timereg]; }; + riskRegression = derive2 { name="riskRegression"; version="2020.02.05"; sha256="1m02aap91hn1gaaadc9qk3ij33l613b03biw52l79dp32yfwzdmm"; depends=[cmprsk data_table doParallel foreach ggplot2 lattice lava plotrix prodlim Publish ranger Rcpp RcppArmadillo rms survival timereg]; }; riskSimul = derive2 { name="riskSimul"; version="0.1"; sha256="0s2a1mn6g11m96gqscb916caj2aykcs3rkacpqcdnlyzryk1gsnb"; depends=[Runuran]; }; riskclustr = derive2 { name="riskclustr"; version="0.2"; sha256="0j5gcm9a57yrg5ppqmacdjr16b9d8rwqkhq1mawy1fjpf18d2max"; depends=[aod gtools Matrix mlogit stringr]; }; risksetROC = derive2 { name="risksetROC"; version="1.0.4"; sha256="1fh0jf8v536qzf1v3awx3f73wykzicli4r54yg1z926ccqb4h80l"; depends=[MASS survival]; }; @@ -12725,15 +12746,15 @@ in with self; { ritis = derive2 { name="ritis"; version="0.8.0"; sha256="1ggcchavhxcd3pawcf631ca8w1y4v0ygm1hflvkmzhk4k9ci3g13"; depends=[crul data_table jsonlite solrium tibble]; }; riv = derive2 { name="riv"; version="2.0-5"; sha256="0n19jlrs12iysq45xyi3zvghkircg0ww5vbsfpnqkw5b22zsv30s"; depends=[MASS quantreg rrcov]; }; riverdist = derive2 { name="riverdist"; version="0.15.0"; sha256="145mvqnhv12dcvss54wdycgb3wwk95phl4kx5z0jnh3kmm1zsdl4"; depends=[rgdal sp]; }; - rivernet = derive2 { name="rivernet"; version="1.2"; sha256="0lvl7m1y779g7jsbbc2gh1h6giy1m293j0ky9759c0w17fm454fd"; depends=[]; }; + rivernet = derive2 { name="rivernet"; version="1.2.1"; sha256="0p8jyigbxipwds9pdw2gzv3ql5yikg1ik4vbk4drylbp5xhmvyja"; depends=[]; }; riverplot = derive2 { name="riverplot"; version="0.6"; sha256="0q1icpny8nkxyjhawyjzwrw8qlz0ayn2xyrsqrm4vkxyv6c9xk8z"; depends=[]; }; rivervis = derive2 { name="rivervis"; version="0.46.0"; sha256="19jsl5g46jcbc0kg47bsif1wrw9z9brgvwdcxqjc89shnx3hzzfv"; depends=[]; }; - rivr = derive2 { name="rivr"; version="1.2-1"; sha256="17kh5kin2id8imarvwkjikrmz266x2ldja6b7xpj34s35dzap682"; depends=[Rcpp]; }; + rivr = derive2 { name="rivr"; version="1.2-2"; sha256="0xnkhglj5ky3ly73xif9kf400av2hwys8iq8yqhxwfdgy0jx7g6y"; depends=[Rcpp]; }; rjade = derive2 { name="rjade"; version="0.1"; sha256="0f1jljj6m1almz0na984n0g314y0rl6a0mx04rbrpipgfgz1h37c"; depends=[V8]; }; rjags = derive2 { name="rjags"; version="4-10"; sha256="1nhaim84ww8fd6m8xlpmngqcnp2qpql29ahc38366fxja3ghngmx"; depends=[coda]; }; rjazz = derive2 { name="rjazz"; version="0.1.7"; sha256="0wmqlpgcr98dvapfmdcph5mdv202rzzsvb06iy5sqvpizpg7pbsz"; depends=[RCurl]; }; rjdqa = derive2 { name="rjdqa"; version="0.1.0"; sha256="07qvvy3i0ak7p717wf68gx8d1m9l4lhibf0ynmc0jny58i56fiw8"; depends=[plotrix RJDemetra]; }; - rje = derive2 { name="rje"; version="1.10.13"; sha256="08s8pw0v49z504y529yhyhp3gj1836fpxmbfhb01ka7kbj8v6swk"; depends=[knitr]; }; + rje = derive2 { name="rje"; version="1.10.15"; sha256="0z6df1sc33nz7rhgrr13q03ymraz5wfjbwqqdq6pmyff8mxkzqvj"; depends=[knitr]; }; rjmcmc = derive2 { name="rjmcmc"; version="0.4.5"; sha256="14rzvp6z5avlcnmlmvb6w4gvlh6v4ncbcai3v4c4svnjv555vz45"; depends=[coda madness mvtnorm]; }; rjson = derive2 { name="rjson"; version="0.2.20"; sha256="0v1zvdd3svnavklh7y5xbwrrkbvx6053r4c5hgnk7hz7bqg7qa1s"; depends=[]; }; rjsonapi = derive2 { name="rjsonapi"; version="0.1.0"; sha256="0qshll0y8b6lbfrqmp69w9kc9hgfrz94dk68nddshk9ilg14lx4d"; depends=[crul jsonlite plumber R6]; }; @@ -12744,8 +12765,8 @@ in with self; { rknn = derive2 { name="rknn"; version="1.2-1"; sha256="1x9r01314q0wgqwqzd7d13ycjzb4jzghzd3whgjvm2rsmnabai95"; depends=[gmp]; }; rkt = derive2 { name="rkt"; version="1.5"; sha256="1rgf7dnk4d1b46rns2mb2s1ilxq7hqrh057vrrl00324r4h8bs1k"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; - rlang = derive2 { name="rlang"; version="0.4.3"; sha256="0qsqfikbsj55x5brghnkzzp7pz0japr4xnzm993f668mlls3f6i4"; depends=[]; }; - rlas = derive2 { name="rlas"; version="1.3.4"; sha256="0ccdbg634ibdjh1c7bri4l6achfrb4agy4iilr4z1pc1yzgsnk6r"; depends=[BH data_table Rcpp]; }; + rlang = derive2 { name="rlang"; version="0.4.5"; sha256="1a0h3dr519p3jj6aygbhwi9f2zwlan6d07f1gkh2db56y5vaq7yd"; depends=[]; }; + rlas = derive2 { name="rlas"; version="1.3.5"; sha256="01ncx3rckr7fwl6fqlj1rn0k6563kp4dfn3yhxqzd49rwhvclkcf"; depends=[BH data_table Rcpp]; }; rlc = derive2 { name="rlc"; version="0.2.0"; sha256="083pkajxshckk3hqg7q87jdmiqg9a1jp5lwar6f5r4nqna4kf3xa"; depends=[hwriter jrc jsonlite plyr R6 stringr]; }; rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; }; @@ -12763,34 +12784,35 @@ in with self; { rmaf = derive2 { name="rmaf"; version="3.0.1"; sha256="0w247mamwgibr5576p5c2lzaiz2lv2c25n7gw9q99s7rc4bps7j7"; depends=[]; }; rmake = derive2 { name="rmake"; version="1.1.0"; sha256="00qlki2vps505nxzmfykf1iyq4b0y20nb75hbfcj63ap46z7zk3c"; depends=[assertthat pryr rmarkdown visNetwork]; }; rmangal = derive2 { name="rmangal"; version="2.0.0"; sha256="0vn5i6hwi64kzi481m3y696cqdxz6frv1n7xxm72a3vbz1jsqcrf"; depends=[httr igraph jsonlite memoise purrr]; }; - rmapshaper = derive2 { name="rmapshaper"; version="0.4.2"; sha256="1m0zb5vh4mph5lz5c5rdjl3clk7rih0ipf31a91cv308fvxhlrvi"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; + rmapshaper = derive2 { name="rmapshaper"; version="0.4.3"; sha256="1xyv5cllgdf62icfy13yg5yhcxxdf6zhkz3996b5cv15gr6lcdjy"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; rmapzen = derive2 { name="rmapzen"; version="0.4.2"; sha256="1vybg3lmrqghvd23jwpfmypvqz2b65bc0m2pwbpizwkkg35iza70"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; rmargint = derive2 { name="rmargint"; version="1.0.2"; sha256="1hl2nxmgknw74jvmc05wz6zkf7i151xl7h7hdpcivvm60yizlx8i"; depends=[]; }; rmarkdown = derive2 { name="rmarkdown"; version="2.1"; sha256="0pa5xs0vzwn9vsgysjqbks9v5lbqphxh5agciskllibc40hhwigg"; depends=[base64enc evaluate htmltools jsonlite knitr mime stringr tinytex xfun yaml]; }; rmatio = derive2 { name="rmatio"; version="0.14.0"; sha256="072fxg81r4rsc71qrf5p6lr5s3gchbgvxhyzwlx3wxw7y2px6w7y"; depends=[Matrix]; }; rmcfs = derive2 { name="rmcfs"; version="1.3.1"; sha256="1y59r4n2ywinfpkb7zn7gygl97w6p0rvr90sjqy4vdhi60ka16kf"; depends=[data_table dplyr ggplot2 gridExtra igraph reshape2 rJava stringi yaml]; }; rmcorr = derive2 { name="rmcorr"; version="0.3.0"; sha256="1p05ln653yrd02wmn8wfzawiw6a924d8an0568fcbgl1pdna43b1"; depends=[psych RColorBrewer]; }; + rmd = derive2 { name="rmd"; version="0.1.5"; sha256="00fsssd4hnk00wsrials4lwxrjnr84ppnk7094bfswpfc0iawc3z"; depends=[blogdown bookdown bookdownplus citr cli crayon curl devtools dplyr DT magrittr mindr miniUI pagedown purrr rappdirs rmarkdown rstudioapi rticles rvest shiny shinyjs tibble tinytex xaringan xml2]; }; rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; }; rmda = derive2 { name="rmda"; version="1.6"; sha256="1m7j79jwii9la47w34ka3yl1n7nql8pfn32if0aycn4yw5sy8dmc"; depends=[caret MASS pander reshape]; }; rmdcev = derive2 { name="rmdcev"; version="1.1.1"; sha256="0pz60hzd3gvmrzcb29h0h4zb4lr5sdyw3nsa84hixsph00cf4lm0"; depends=[BH dplyr Formula purrr Rcpp RcppEigen rlang rstan rstantools StanHeaders stringr tibble tidyr tidyselect tmvtnorm]; }; rmdfiltr = derive2 { name="rmdfiltr"; version="0.1.2"; sha256="1hj4lhwyz47hznyqjgghp852fkzhk5k7dfp7cxabg8h49qzswcgx"; depends=[assertthat rmarkdown]; }; - rmdformats = derive2 { name="rmdformats"; version="0.3.6"; sha256="157811frmm1f7d7r27wr7f71frggm664w1diymw1kd88wgw3z89r"; depends=[bookdown htmltools knitr rmarkdown]; }; + rmdformats = derive2 { name="rmdformats"; version="0.3.7"; sha256="1pwd4z175dmz4fpg094rba48gq6sir8ys7ln7pfdsnwmgf79sj9k"; depends=[bookdown htmltools knitr rmarkdown]; }; rmdplugr = derive2 { name="rmdplugr"; version="0.4.1"; sha256="16wmrya8wdipqcrh34k4v4iq05aqd0jwf7rg6w1wsvx2i9211xg6"; depends=[bookdown rmarkdown]; }; rmdshower = derive2 { name="rmdshower"; version="2.1.1"; sha256="1sjpi5ils31adii51gaa8ly7x93l9ganp6in8rsln6si4jc2ppg9"; depends=[rmarkdown]; }; rmeta = derive2 { name="rmeta"; version="3.0"; sha256="0vkbnxp579v8zmcv1isdbzj5swpr6fq17zwparxcvzswjc2x9ydr"; depends=[]; }; - rmetalog = derive2 { name="rmetalog"; version="1.0.0"; sha256="1ndw8drzhf74sjx31zfhhx9q1l6pdn4yx2i8l7klp38d5bsc27xm"; depends=[ggplot2 lpSolve]; }; - rmetasim = derive2 { name="rmetasim"; version="3.1.7"; sha256="0sz4mdprdi6sgkfwfdvh2hr9nxiwq17sw0vggq3cvs7lzb0i6m9r"; depends=[ade4 adegenet gtools pegas]; }; + rmetalog = derive2 { name="rmetalog"; version="1.0.2"; sha256="00ln3wl23ybjgs44h9x388p56x8jymd54vbcfpzidbhz2im1ilbf"; depends=[ggplot2 lpSolve]; }; + rmetasim = derive2 { name="rmetasim"; version="3.1.14"; sha256="0rdkhfgyr97r2d1kd9g8ipb2pn563qxm1y4m9z678q0kqan2ddl0"; depends=[ade4 adegenet gtools pegas]; }; rmgarch = derive2 { name="rmgarch"; version="1.3-7"; sha256="108wrbqj4c02c9cyv5m5xlswb1mlfdrhggb005sixr2dcqghb163"; depends=[Bessel corpcor ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; }; rmi = derive2 { name="rmi"; version="0.1.1"; sha256="1y0395l9lhskdrk3x9ps2dmv0sznsba0n6a9fmma33dc9dhywgf9"; depends=[BH Rcpp RcppArmadillo]; }; rminer = derive2 { name="rminer"; version="1.4.3"; sha256="0x9lzzhhy5zld8fajf4aq1msvck2kg3hvkpaiw4lx7w14znda7kd"; depends=[adabag Cubist e1071 glmnet kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart xgboost]; }; rmio = derive2 { name="rmio"; version="0.1.3"; sha256="0zd8kki9wmh4xnabf7nwjw66wb4x5wngn0073pzqcj84ggxgnwqc"; depends=[]; }; - rmonad = derive2 { name="rmonad"; version="0.5.0"; sha256="0m7hhmn87rfh49hxrjlcxcq6q36niyxlh3w2frld68jkbks71jn5"; depends=[digest glue igraph magrittr pryr]; }; + rmonad = derive2 { name="rmonad"; version="0.7.0"; sha256="1vjx8kk57xk7c2a05c6kn75n17842ya7j41hqj3wmgq8yvaxrngx"; depends=[digest glue igraph magrittr pryr]; }; rmpw = derive2 { name="rmpw"; version="0.0.4"; sha256="1a49rvdwvmccv4gfir48fw0b9jyrpc2q9zfyk5j9b7nxsx6x7abl"; depends=[gtools MASS]; }; rms = derive2 { name="rms"; version="5.1-4"; sha256="19knh1sw0icw6jh9wfb2hq5jf49i2qfvp9myvqm5paa495689x9q"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; }; rms_gof = derive2 { name="rms.gof"; version="1.0"; sha256="1n0h3nrp11f2x70mfjxpk2f3g4vwjaf4476pjjwy49smxxlxwz82"; depends=[]; }; rmsfact = derive2 { name="rmsfact"; version="0.0.3"; sha256="05s23rfs9prr2ia3h4h9y614xhv91lbgppgf3mrrssxkwz220kd5"; depends=[]; }; rmsfuns = derive2 { name="rmsfuns"; version="0.0.0.3"; sha256="0dn39d8kjkk808zjhb6npl7igmbp3j5q15z70f59g9j6xwm9dvnz"; depends=[dplyr magrittr PerformanceAnalytics purrr readr tbl2xts xts zoo]; }; - rmumps = derive2 { name="rmumps"; version="5.2.1-7"; sha256="0gnsynhlxh6pbhi1gr3zdi5y1gbbhbcp50z7y9b97px4j3hwignf"; depends=[Rcpp]; }; + rmumps = derive2 { name="rmumps"; version="5.2.1-12"; sha256="142f8kf6qydh7qrdhs12836zri137f0b3vaq8kqmcvya07pviyr9"; depends=[Rcpp]; }; rmutil = derive2 { name="rmutil"; version="1.1.3"; sha256="1nl20nyahnm55z41d096ni9iqhn19ab98i9c13ja1i6ik4gg9fks"; depends=[]; }; rmweather = derive2 { name="rmweather"; version="0.1.3"; sha256="1qdf511vmpffrdfcxlll54km2s0pf6pdswj8401k4ymv5iif91hl"; depends=[dplyr ggplot2 lubridate magrittr pdp purrr ranger stringr strucchange tibble viridis]; }; rmytarget = derive2 { name="rmytarget"; version="2.1.8"; sha256="1sn1pncxnv2jgxhmbm4zlq6zyi8nsz90x8b7697qlqf2la837v96"; depends=[dplyr httr lubridate purrr stringr]; }; @@ -12799,7 +12821,7 @@ in with self; { rnaturalearth = derive2 { name="rnaturalearth"; version="0.1.0"; sha256="193b31a7n9jhc607mhwxbpx5gr0fpj3qasm9dbi6kcc7vac3ilgm"; depends=[sf sp]; }; rnaturalearthdata = derive2 { name="rnaturalearthdata"; version="0.1.0"; sha256="1z32j5lz2lb8xgpkr73majw22k0b49iazj6jjc7j4w9k4zxxa102"; depends=[sp]; }; rnbp = derive2 { name="rnbp"; version="0.1.0"; sha256="01hx9r7ai42kcj8l7bmqrma8w3l1f9bmg2ingpqxirimxkfwv2k8"; depends=[curl httr jsonlite]; }; - rncl = derive2 { name="rncl"; version="0.8.3"; sha256="03c8sizm32rdilbvf67gsw81w7i623pajn9blrrkq8rq8j3zdbns"; depends=[progress Rcpp]; }; + rncl = derive2 { name="rncl"; version="0.8.4"; sha256="0ss9jqrvv7bhvl5j74cjrp8r866d9dlavrbbfscwz3mhkgfx06bb"; depends=[progress Rcpp]; }; rneos = derive2 { name="rneos"; version="0.3-2"; sha256="0m5mmhwnrk9ifv91s5ngmlvqqd7bw1n7glzkgk5i72cw0siiwmh0"; depends=[RCurl XML]; }; rnetcarto = derive2 { name="rnetcarto"; version="0.2.4"; sha256="0fk5rym6zp049bl1f7bkl2231mjh3pgnxn0nhvmzpsah08rh4rr6"; depends=[]; }; rngSetSeed = derive2 { name="rngSetSeed"; version="0.3-2"; sha256="00mqjjkhbnvxqkf1kz16gipsf98q62vmhx9v8140qs7c4ljbhc3a"; depends=[]; }; @@ -12810,27 +12832,26 @@ in with self; { rnoaa = derive2 { name="rnoaa"; version="0.9.5"; sha256="123gzgycv8lnx9dikkqjn2fhnpzlwgxdmzkvdvf3kgwl1gw9170b"; depends=[crul dplyr geonames ggplot2 gridExtra hoardr isdparser jsonlite lubridate rappdirs scales tibble tidyr tidyselect XML xml2]; }; rnpn = derive2 { name="rnpn"; version="0.1.0"; sha256="10xx8fxgdknv71ks42xxvf38xsmjy6s87y67wi21673v0n07fxb5"; depends=[data_table httr jsonlite plyr]; }; rnr = derive2 { name="rnr"; version="0.2.1"; sha256="1z9bab3qmq8d79bcvjzldbxlah2w8mqp2ifd0cn1348dafwa0dhi"; depends=[assertthat purrr]; }; - rnrfa = derive2 { name="rnrfa"; version="2.0.1"; sha256="1p7wc3czp0i6il16nc1syp51i5gnb1hjx32j35ms8v20ficyb1zp"; depends=[curl dplyr ggmap ggplot2 httr jsonlite lubridate rgdal sp tibble xts]; }; + rnrfa = derive2 { name="rnrfa"; version="2.0.2"; sha256="0sjg04y1s7wfvimwv19ay5qhldsvncy34j0r79ddys7pmzql1aic"; depends=[curl dplyr ggmap ggplot2 httr jsonlite lubridate rgdal sp tibble zoo]; }; roadoi = derive2 { name="roadoi"; version="0.6"; sha256="1mlf63018qpgyqma51fas1nvags7qcrsw11hm6c1idnxjh0sz82z"; depends=[dplyr httr jsonlite miniUI plyr purrr shiny tibble tidyr]; }; - roahd = derive2 { name="roahd"; version="1.4.1"; sha256="0d89d21s32bsjkm8bdiqrbccd3m9badh87vrsb1laawhl4hr3dn9"; depends=[dplyr magrittr robustbase scales]; }; - robCompositions = derive2 { name="robCompositions"; version="2.2.0"; sha256="093lg17i8f94prai6mzwl70w3iy40hda6311mq9sirspr77nz3ni"; depends=[car cluster cvTools data_table e1071 fpc GGally ggplot2 kernlab MASS mclust pls Rcpp RcppEigen reshape2 robustbase rrcov sROC tidyr VIM zCompositions]; }; + robCompositions = derive2 { name="robCompositions"; version="2.2.1"; sha256="18p0rb04fzmwqsxcap5mxhhmhav6qs05icdaq3msmbp0n9iwrpz6"; depends=[car cluster cvTools data_table e1071 fpc GGally ggplot2 kernlab MASS mclust pls Rcpp RcppEigen reshape2 robustbase rrcov sROC tidyr VIM zCompositions]; }; robFitConGraph = derive2 { name="robFitConGraph"; version="0.1.0"; sha256="092nc0xnjs2zxd9ij0dl1xggb8mwl8nly284yjhhygmwlwsvhzxm"; depends=[MASS mvtnorm Rcpp]; }; robcbi = derive2 { name="robcbi"; version="1.1-3"; sha256="0rj732qdd0wd9d9pxldnsw5rif5d7wz327iydvxcf5x8lgvk42jd"; depends=[robeth]; }; robcor = derive2 { name="robcor"; version="0.1-6"; sha256="1hw8simv93jq8a5y79hblhqz157wr8q9dzgm0xhvvv5nkzyqkpzf"; depends=[]; }; robcp = derive2 { name="robcp"; version="0.2.5"; sha256="023g9w26bxia873qblscdcf50r7qv5hknwdx45dqbr3r778ls8bn"; depends=[]; }; - robeth = derive2 { name="robeth"; version="2.7-5"; sha256="0jz3ivck9ma8x03sz41zkln3qh70ckfm5c2l57nlxi0ci5h0dfh2"; depends=[]; }; + robeth = derive2 { name="robeth"; version="2.7-6"; sha256="1x0hzgq7jwl83wwmy581ia8009v0j95aksnr5ywpflnqm76rj6v2"; depends=[]; }; robets = derive2 { name="robets"; version="1.4"; sha256="0lvzfpv6569pjysblhadd05sglx0qvyr9wipb9cpiya4a1992n61"; depends=[forecast Rcpp]; }; robfilter = derive2 { name="robfilter"; version="4.1.2"; sha256="0mvpaf6g694b7175bl3yr6lxbwla4pwp7g4y34qb4klgl5n3nw03"; depends=[lattice MASS robustbase]; }; - robin = derive2 { name="robin"; version="0.99.1"; sha256="0ghlfkpcfnywfb8psszbkzrljlissw11y4n52hhgm9ivk2ds4lk5"; depends=[DescTools fdatest ggplot2 gprege igraph networkD3]; }; + robin = derive2 { name="robin"; version="1.0.0"; sha256="0g0dzk20z98ygbxs3f8ylfjryxpdz5112jvdiax4iyj890yjp93c"; depends=[DescTools fdatest ggplot2 gprege igraph networkD3]; }; robis = derive2 { name="robis"; version="2.1.8"; sha256="1qi6ay0v3vc2gz5xalgj8vfx7zaiz5726mkkgwawxfj35gmdq0mk"; depends=[dplyr ggplot2 httr jsonlite leaflet]; }; - robmed = derive2 { name="robmed"; version="0.5.0"; sha256="02kavd5vllp3mf2gir66kf00n1ppc19k47zg4agfm2rhcn8whz9s"; depends=[boot ggplot2 quantreg robustbase shiny]; }; + robmed = derive2 { name="robmed"; version="0.6.0"; sha256="1rlfn85nq6dpwwlp3z567vq23i233iwsjb0jss4ahfbnayydq2ir"; depends=[boot ggplot2 quantreg robustbase shiny]; }; robmixglm = derive2 { name="robmixglm"; version="1.0-2"; sha256="0z23frjv9yscw0q33s5vlrmisg9an5hksyhcrgcnlan6x63r91kq"; depends=[actuar bbmle boot fastGHQuad MASS numDeriv Rcpp VGAM]; }; robotstxt = derive2 { name="robotstxt"; version="0.6.2"; sha256="1c1rhiwkdzvbspwa5km6gp3sjhzmb60ljibb2pf26s931lkr5b6l"; depends=[future future_apply httr magrittr spiderbar stringr]; }; robreg3S = derive2 { name="robreg3S"; version="0.3"; sha256="0rv8qh98wws1f40d1kmysyy9qin0ngsvwq63cnxbwi290wsnrvls"; depends=[GSE MASS robustbase]; }; robregcc = derive2 { name="robregcc"; version="1.0"; sha256="159ms69jqjkf8bhi4hkm929hpwqi8qbcfyaahcjlkyximv7qnqaz"; depends=[magrittr MASS Rcpp RcppArmadillo]; }; robsurvey = derive2 { name="robsurvey"; version="0.1.1"; sha256="0rf2sd7maz565hlgpyhvkswqyck01hif4mg5isbnnky9n3nc98pi"; depends=[survey]; }; robumeta = derive2 { name="robumeta"; version="2.0"; sha256="1ynlfxlzh442jd1cf02j0f948m16d536a30gb4bf7208baqri1vg"; depends=[]; }; - robust = derive2 { name="robust"; version="0.4-18.2"; sha256="02x7d6dgx3skiadvx5m3c44b4bhz37ycpfhc25dhhv50y1db6l3k"; depends=[fit_models lattice MASS robustbase rrcov]; }; + robust = derive2 { name="robust"; version="0.5-0.0"; sha256="1ks5scp8bnicl9j1r8yrmz668fjs6ifdmi540zw6d2ck500bbw42"; depends=[fit_models lattice MASS robustbase rrcov]; }; robustBLME = derive2 { name="robustBLME"; version="0.1.3"; sha256="18wx116l1riy4wn4083kxl637mkyyi9wbwnmvhkgqw3vb36s4vxd"; depends=[doParallel foreach iterators lme4 mvtnorm numDeriv Rcpp RcppArmadillo]; }; robustDA = derive2 { name="robustDA"; version="1.1"; sha256="1yys6adkyms5r4sw887y78gnh97qqr7sbi5lxv5l9bnc4ggcfiz6"; depends=[MASS mclust Rsolnp]; }; robustETM = derive2 { name="robustETM"; version="1.0"; sha256="1dlj79v08bls500lb81rya6vwx58h97rpq1sy9zwd3mfl9b6awp9"; depends=[]; }; @@ -12872,31 +12893,30 @@ in with self; { roots = derive2 { name="roots"; version="1.0"; sha256="1ssmmmrg18xmqxs6f7dqv07357iwcvk21j1gxsl8s9njbj2plxai"; depends=[animation igraph rARPACK]; }; rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; }; ropenaq = derive2 { name="ropenaq"; version="0.2.7"; sha256="161yc2d82iivxaqpl5kzvxcmcqjpv6s5jj9pa304vj8cz0rnxgfr"; depends=[crul dplyr jsonlite lazyeval lubridate tidyr]; }; - ropenblas = derive2 { name="ropenblas"; version="0.2.0"; sha256="0bz0q4qw1ivr7l37vsrcimrndgww3ay9dbk2ga3fxhnz50yq6kxr"; depends=[cli fs getPass git2r glue magrittr RCurl rstudioapi stringr XML]; }; + ropenblas = derive2 { name="ropenblas"; version="0.2.2"; sha256="1sbk41nd2hjv93a7xd1jlpcxs7gdrkp6j27x8312zarwla2ra0qd"; depends=[cli fs getPass git2r glue magrittr RCurl rstudioapi stringr XML]; }; ropendata = derive2 { name="ropendata"; version="0.1.0"; sha256="1bv6y241abs6pb4wq5ybx9x4zh72kf8ffs3vlcgdsmhw4jwrsxdl"; depends=[httr jsonlite]; }; ropensecretsapi = derive2 { name="ropensecretsapi"; version="1.0.1"; sha256="0d4yl0h4am3blskdnzk119hk374c3vx0cg99r20w07yh8jfafrw7"; depends=[RCurl RJSONIO]; }; roperators = derive2 { name="roperators"; version="1.1.0"; sha256="0klmk1jmh1iysgf345qa6qyjmn1pkz072ha254k90flprgicg7c6"; depends=[]; }; ropercenter = derive2 { name="ropercenter"; version="0.2.0"; sha256="1ghn666jhwmkxwrr8pc398nhzvg4y4097pa19m4b08d9mkg9iqlj"; depends=[dplyr foreign haven httr readr rvest stringr tibble tidyr xml2]; }; roprov = derive2 { name="roprov"; version="0.1.2"; sha256="16w9i7svlkn2wbv35890f1zpcxilj0ar28d2xrdvmx7ni9vrz61q"; depends=[CodeDepends fastdigest igraph]; }; roptim = derive2 { name="roptim"; version="0.1.2"; sha256="0kamdhyc7s1i7mbgzf6zbdbcs2qjjq4wgl1v181xzhq6gpv7fhy6"; depends=[Rcpp RcppArmadillo]; }; - rorcid = derive2 { name="rorcid"; version="0.5.0"; sha256="0508dc3av593bqylrq5zysav56p9243hg35gs8vhnbqjngfm1pib"; depends=[crul data_table fauxpas httr jsonlite tibble xml2]; }; + rorcid = derive2 { name="rorcid"; version="0.6.4"; sha256="0v8h1d5dwx5aafw1dq64b8clhzc0ksnqpy5pfbid9c1f290xk907"; depends=[crul data_table fauxpas httr jsonlite tibble xml2]; }; + rorqual_morpho = derive2 { name="rorqual.morpho"; version="0.1.1"; sha256="1475yhb5qwj4zpsc4gqqpzs7qvyddxwc63i1f4rhnv6id2hi4msp"; depends=[dplyr magrittr]; }; rorutadis = derive2 { name="rorutadis"; version="0.4.2"; sha256="13a7xj4qw1nd8xgrqhrki3php960lgy9gy38sg4kpvs4j2rwijzc"; depends=[ggplot2 gridExtra hitandrun Rglpk]; }; rosetta = derive2 { name="rosetta"; version="0.2.0"; sha256="0b5xcy9gzw8d71m2pyx1m71mnbdggckhd42c7pzhkivkl79n5wdz"; depends=[car ggplot2 ggrepel gridExtra lavaan lme4 multcompView pander plyr psych pwr rio ufs]; }; rosetteApi = derive2 { name="rosetteApi"; version="1.14.3"; sha256="1fq5wg2rgcqv4x5045zgccpawgi6ac47hykfam9waqjnqy7r4y1a"; depends=[httr jsonlite]; }; rosm = derive2 { name="rosm"; version="0.2.5"; sha256="10n3yzhk29i3mzbcg6nkjqgvwc9n53ax0d7imn9l4a9msa06as07"; depends=[abind curl jpeg plyr png prettymapr rgdal rjson sp]; }; rospca = derive2 { name="rospca"; version="1.0.4"; sha256="1pxm34xsc2610n0i6dwcm4rhn016yqb03f8vrm93r7285c04n4q7"; depends=[elasticnet mrfDepth mvtnorm pcaPP pracma robustbase rrcov rrcovHD]; }; rosqp = derive2 { name="rosqp"; version="0.1.0"; sha256="0975g7p75bq238g7lr200svsqm9i11z7l331r0igm5ycahljrlsm"; depends=[Matrix R6 Rcpp]; }; - rotasym = derive2 { name="rotasym"; version="1.0-6"; sha256="134gpkcryqy4kwnm89d0ihzx4s7m7bs1wypq6mp2ajdnn8qh6zv1"; depends=[Rcpp RcppArmadillo]; }; + rotasym = derive2 { name="rotasym"; version="1.0.7"; sha256="19m47cs96frqavgx8rhr4xjdf1yzd6fm3a7dpskicxgmdis1yxii"; depends=[Rcpp RcppArmadillo]; }; rotationForest = derive2 { name="rotationForest"; version="0.1.3"; sha256="1z2wk3mcs5hrahsxralidbc0dd8gxdbwjpr2f71g4g3isfx1ic8d"; depends=[rpart]; }; - rotations = derive2 { name="rotations"; version="1.5"; sha256="1zksh6hyxdkm0lvvrld6dgkmhszn6wsjrjzr2xbn3af3gsvsydaa"; depends=[ggplot2 Rcpp RcppArmadillo rgl sphereplot]; }; rotl = derive2 { name="rotl"; version="3.0.10"; sha256="0fh7fmaylv9490yhw6sknv03xmx5isp29mlr0xypyh6mwagngd1q"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; rotor = derive2 { name="rotor"; version="0.2.4"; sha256="0m947mihnxjzsb64p5dgi4v1y1g3c172xlhdg08nzb2z21qg4r73"; depends=[dint R6]; }; roughrf = derive2 { name="roughrf"; version="1.0"; sha256="0nwdynqfb9yzjvi1lykgdkch3b4g09aj8vbd6sf5pyx473s066y4"; depends=[mice nnet randomForest]; }; round = derive2 { name="round"; version="0.12-1"; sha256="0smvyszxvq5c5p1mhkpcjphnmijjxn05n70xvg5syij200gn60fm"; depends=[]; }; roundhouse = derive2 { name="roundhouse"; version="0.0.1"; sha256="142dw9ky6fyp5n8zf5lymx083gi56q6wxj4jm0m8cjb0khiqw2lq"; depends=[httr jsonlite]; }; routr = derive2 { name="routr"; version="0.4.0"; sha256="1vswq7vm80nwb50grr4cs290kbq5lx9b19dq0c2wlp9d2dxk50si"; depends=[assertthat digest httpuv R6 reqres stringi uuid]; }; - rowr = derive2 { name="rowr"; version="1.1.3"; sha256="1f93c2yni956flwnxgphn340pc7p6yagr5xnmhinjgk9kvsd07yh"; depends=[]; }; - roxygen2 = derive2 { name="roxygen2"; version="7.0.2"; sha256="162xag27hwwyadfwm5zpyy15nxwhw2vbhwapx3jmi9cfyryr68sq"; depends=[brew commonmark desc digest pkgload purrr R6 Rcpp rlang stringi stringr xml2]; }; + roxygen2 = derive2 { name="roxygen2"; version="7.1.0"; sha256="00s1wzx5960k8pzgpz4kikjf4k061hyhnd278y65q6n0wzv3d6vy"; depends=[brew commonmark desc digest knitr pkgload purrr R6 Rcpp rlang stringi stringr xml2]; }; roxygen2md = derive2 { name="roxygen2md"; version="1.0.0"; sha256="1gvrfy0sk5qi8d93zxj5f7xgnnw0w38zyxdik4ckf0pkk0zdm27a"; depends=[desc devtools enc rex rlang tibble usethis withr]; }; royston = derive2 { name="royston"; version="1.2"; sha256="1rywc89qzx0hldbq10201bjdhz60pq2gmgd9b9j52mza3w4canjz"; depends=[moments nortest]; }; rpact = derive2 { name="rpact"; version="2.0.6"; sha256="09ikjcvz6jisbl387j5idypwxqn2ir55cq8f19klwc0p0d113wg4"; depends=[Rcpp]; }; @@ -12910,16 +12930,16 @@ in with self; { rpatrec = derive2 { name="rpatrec"; version="1.0.1"; sha256="0zj461frf6n5s97zq7r52q0blsn2xq2759impgz6v4pr87gmq0si"; depends=[np]; }; rpca = derive2 { name="rpca"; version="0.2.3"; sha256="135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z"; depends=[]; }; rpcdsearch = derive2 { name="rpcdsearch"; version="1.0"; sha256="17g3x15qgv2hamlj451sb88i83n8svw5vnmjpijp5cnn5d1jx0d6"; depends=[assertthat combinat dplyr stringr xlsx]; }; - rpdo = derive2 { name="rpdo"; version="0.2.5"; sha256="1504f1i4aldnasnkc596pfpyqcmpvk6p20k46s27j8ld5470w3hn"; depends=[checkr err]; }; - rpf = derive2 { name="rpf"; version="0.62"; sha256="1vgqhwi676bi9jjxljnxblw65b5szjwbp87wnsabc11vfjzc9wki"; depends=[mvtnorm RcppEigen]; }; + rpdo = derive2 { name="rpdo"; version="0.3.0"; sha256="1l3rrkcpfgs6wgir6ls34385ihb179xbpxrbpkf7cnpwy8hc7amk"; depends=[chk]; }; + rpf = derive2 { name="rpf"; version="1.0.3"; sha256="1i2kqd7nx55nn35qnw89xmnqk23x9c8xhkh736c2xg7k2ai84ybl"; depends=[lifecycle mvtnorm Rcpp RcppEigen]; }; rpg = derive2 { name="rpg"; version="1.6"; sha256="1vn5cswrkmw98z1dr0f0yjkz3n8kwvjb4zknqg81fzqsagfc89yx"; depends=[getPass RApiSerialize Rcpp uuid]; }; - rphast = derive2 { name="rphast"; version="1.6.9"; sha256="111m824z7z0lqdj4kk4cp1yfjhx7d5d9463k892dyvgjvkagvi9g"; depends=[]; }; rphylopic = derive2 { name="rphylopic"; version="0.2.0"; sha256="0wmdvdz75bbwhn3qk8ic5lj256ik27d7vxrq9hg8c9rqzygj8wh3"; depends=[crul ggplot2 gridBase jsonlite png]; }; rpicosat = derive2 { name="rpicosat"; version="1.0.1"; sha256="1zj2d6jairmvya91vhv9kpkf34zmzl9vlha5yvfjj0j0apmqc0li"; depends=[]; }; rpinterest = derive2 { name="rpinterest"; version="0.3.1"; sha256="0kkf73byhgzqxw85wda3nh7qsq81pc035vi6z3fhnvb9ssszwakc"; depends=[httr magrittr rjson]; }; rpivotTable = derive2 { name="rpivotTable"; version="0.3.0"; sha256="0ndhsw4nnz6wf0v8dh4sz8867m01jjkzw6aq7f490z1ypa3d9fv5"; depends=[htmlwidgets]; }; rplos = derive2 { name="rplos"; version="0.8.6"; sha256="1i5dzlv57bpddf9qsnq0azc0fsbmzqz9bkrijabp2qwxg0w76mcx"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; }; rplotengine = derive2 { name="rplotengine"; version="1.0-7"; sha256="1bbciq84l0h6g4qajlcqg3v66g2rspflv6k7x5h5qzwlcb4p4dps"; depends=[xtable]; }; + rpls = derive2 { name="rpls"; version="0.4.0"; sha256="1dhnm8z6cn316p7mnnpc7l3acs2rq0bwc29amqg0fy4wyy54nrgc"; depends=[pcaPP robustbase]; }; rpmodel = derive2 { name="rpmodel"; version="1.0.4"; sha256="1rbygxk6dbi3pqxri5myc7f3y04haa0slpiaa330malg3dw5a9gc"; depends=[rlang]; }; rpms = derive2 { name="rpms"; version="0.4.0"; sha256="10zw0xln0vjrzrilyn67nnw13aadnskzca1930fvb483c691bm36"; depends=[Rcpp RcppArmadillo]; }; rpnf = derive2 { name="rpnf"; version="1.0.5"; sha256="07byg0ym4d2cr6fp74z379jhsaw4c0xrwf622dvhwa4frn4anl60"; depends=[]; }; @@ -12927,6 +12947,7 @@ in with self; { rpostgis = derive2 { name="rpostgis"; version="1.4.3"; sha256="04x5qdz0kznxnp9kygp0m2rjxyhqfz3mc81mcr4aw6cy5p4zp9aq"; depends=[DBI raster rgeos RPostgreSQL sp]; }; rpostgisLT = derive2 { name="rpostgisLT"; version="0.6.0"; sha256="1adwpkfndm6n3s9xcx8zrwnj6bmgvq4nzs072fnl5i6kjy6ngjm6"; depends=[adehabitatLT DBI htmltools leaflet lubridate magrittr mapview rpostgis RPostgreSQL sf shiny shinyWidgets sp]; }; rpql = derive2 { name="rpql"; version="0.7"; sha256="18llgwk1jfwf3y1dabpc508kfb1k4yh4cr4k76azkziv11arbh0c"; depends=[gamlss_dist lme4 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; + rpredictit = derive2 { name="rpredictit"; version="0.0.2"; sha256="1gsfcs5l83p4x0glhnq5hidh5rxwipklsj0nzkxaim65w9kqgx30"; depends=[dplyr DT dygraphs httr jsonlite magrittr quantmod shiny stringr xts]; }; rprev = derive2 { name="rprev"; version="1.0.3"; sha256="14jc0bszb3cqfqqx5sdvfb3bddrxsifmf97x7cj1lg6pm85wdpvi"; depends=[data_table dplyr ggplot2 lazyeval lubridate magrittr survival tidyr]; }; rprime = derive2 { name="rprime"; version="0.1.0"; sha256="1v6n1qi0i7x8xgizbyvp1mnwc316lsan4rvam44fgjj45fcd79gd"; depends=[assertthat plyr stringi stringr]; }; rprintf = derive2 { name="rprintf"; version="0.2.1"; sha256="0rwqpln0igxb4m6d6jyp7h3shfb8sbp0kj7cgkffjp88hn9qm4h3"; depends=[stringi]; }; @@ -12936,14 +12957,14 @@ in with self; { rpsychi = derive2 { name="rpsychi"; version="0.8"; sha256="1h40kbqvvwwjkz5hrclj6j22zhav3yyfbbhqahs1whwjkksnam4w"; depends=[gtools]; }; rptR = derive2 { name="rptR"; version="0.9.22"; sha256="0vvjc6qiq71d5wckl77z606q1fp43mgrfzp1bxcab96n5whb2r9k"; depends=[lme4 pbapply]; }; rpubchem = derive2 { name="rpubchem"; version="1.5.10"; sha256="06j9ir65ykky5hdbyv74fnddwqd39jxvr6jig0kjqisc75k4spjz"; depends=[base64enc car data_table fingerprint iterators itertools RCurl RJSONIO stringr XML]; }; - rqPen = derive2 { name="rqPen"; version="2.2"; sha256="0zfsrxavyd65x35vg8vwv0fy07b1byf189avxidwfypxm0vr1x8y"; depends=[quantreg regpro]; }; - rqdatatable = derive2 { name="rqdatatable"; version="1.2.5"; sha256="1w4ljwz5lzgry1sn2wgbzccm0d5v49dwdljqw4kamynw1nqi7pby"; depends=[data_table rquery wrapr]; }; - rquery = derive2 { name="rquery"; version="1.4.2"; sha256="0l4747d2kcalq9c5ks18np0qsg7qbvqz0x7nrgh2mi2m9k0jb2rb"; depends=[wrapr]; }; + rpubs = derive2 { name="rpubs"; version="0.2.2"; sha256="18cnzhcvm7gx4k01ysqay53smrf8xqlbaszq41mny5c7qqh1fvpz"; depends=[rvest xml2]; }; + rqPen = derive2 { name="rqPen"; version="2.2.1"; sha256="0k6vk4gvhqjg8am6i48zbhbb6fzlhwy5xi0dmnszm6dhbfv7jvmx"; depends=[quantreg regpro]; }; + rqdatatable = derive2 { name="rqdatatable"; version="1.2.7"; sha256="1p41nc54h4fq57ps1ilm3sq3qr3xhi0bxxhl80ylai0qmb445jd4"; depends=[data_table rquery wrapr]; }; + rquery = derive2 { name="rquery"; version="1.4.4"; sha256="1ccy9pmgbm4q3kljgx1pjhg2059pnb6jbnxq63z1fhnb59rm4nya"; depends=[wrapr]; }; rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; }; rr2 = derive2 { name="rr2"; version="1.0.2"; sha256="099vjg91ni2bnxlra18pvgsvzrl28zrj639cdjrh3wkpqv99d04q"; depends=[ape lme4 Matrix nlme phylolm]; }; rrBLUP = derive2 { name="rrBLUP"; version="4.6.1"; sha256="1ny48ra25rzx3k69pmzpd31ka2zhqyqiq1v7ann862j3ris0w8z9"; depends=[]; }; rrat = derive2 { name="rrat"; version="1.0.0"; sha256="1j1jd32pgggn5cqv66l63sw5p4hblgpznf33wd0zdbfapwy8rx4r"; depends=[quantreg]; }; - rray = derive2 { name="rray"; version="0.1.0"; sha256="0x4wavvjsiy8b9bhgxddisx82k6q52qhngr2am50bf38d3x2n58h"; depends=[glue Rcpp rlang vctrs xtensor]; }; rrcov = derive2 { name="rrcov"; version="1.5-2"; sha256="0m62k58nabw7hjz1qyyf9a0d6lvcz5vcvpksjnq93zcfra9inr57"; depends=[lattice mvtnorm pcaPP robustbase]; }; rrcov3way = derive2 { name="rrcov3way"; version="0.1-18"; sha256="1gpjmmdca2waqks0qykj59p50v6pf1zgl81m5lhbrhpcr4rdr63l"; depends=[nnls robustbase rrcov]; }; rrcovHD = derive2 { name="rrcovHD"; version="0.2-6"; sha256="03dr42np7a0yl3hi2iz4xp5b6yrazx6vlsjrby6fcn9r8y1fmac9"; depends=[pcaPP pls Rcpp robustbase robustHD rrcov spls]; }; @@ -12951,38 +12972,37 @@ in with self; { rrd = derive2 { name="rrd"; version="0.2.2"; sha256="104iz2y49vzm92a8nrvgzrjyljxl467mp1hjnjmzl4rhf9kl809y"; depends=[assertthat tibble]; }; rrecsys = derive2 { name="rrecsys"; version="0.9.7.3.1"; sha256="1qnjriv1xq4gjjhzz8jxrbk88mw5xddl2l2i4bmfhnxhi51d2rk3"; depends=[ggplot2 knitr MASS Rcpp registry]; }; rredis = derive2 { name="rredis"; version="1.7.0"; sha256="0wzamwpmx20did8xj8x9dllri2ps83viyqjic18ari7i4h1bpixv"; depends=[]; }; - rredlist = derive2 { name="rredlist"; version="0.5.0"; sha256="12dqilcwyxad5yjz8gh29ycwj2rbm1g0hxfsqkl7zsjaz5lbcka0"; depends=[crul jsonlite]; }; + rredlist = derive2 { name="rredlist"; version="0.6.0"; sha256="0cl3wbhx96a118f7yld7jf2jq8wimqqvd1apglshyvz3yj03dlxy"; depends=[crul jsonlite]; }; rrefine = derive2 { name="rrefine"; version="1.0"; sha256="1lh3vddrp5k9bhz5spv93w0qm9z5lskpdgxfksys0l3275hzx1lm"; depends=[httr readr rlist]; }; rreg = derive2 { name="rreg"; version="0.2.1"; sha256="05c2yj58zn43zkmqp4iyblsixsq76hsjkchffl5rkqynvgxi0qzi"; depends=[directlabels ggplot2]; }; - rrepast = derive2 { name="rrepast"; version="0.7.0"; sha256="1s596sk993aam5rsb4as2y3n5wcgjlnb25b29l59z0xks1v04mnc"; depends=[digest doParallel foreach ggplot2 gridExtra lhs rJava sensitivity xlsx]; }; + rrepast = derive2 { name="rrepast"; version="0.8.0"; sha256="1x8xda9cndxri2hhd2ihxmjjy0x74r0dh3953dfh7gvj4slaf0rl"; depends=[digest doSNOW foreach ggplot2 gridExtra lhs rJava sensitivity xlsx]; }; rres = derive2 { name="rres"; version="1.1"; sha256="138m26ya119805b1akwski0hf1ypiqsqjlkrm9p0l2x22zrv1n60"; depends=[kernlab Rcpp]; }; rriskDistributions = derive2 { name="rriskDistributions"; version="2.1.2"; sha256="1d9dwgw8la8wwq9cdnl7qibkzbdl4cj0qvf05x7w13ip973dwpaq"; depends=[eha mc2d msm tkrplot]; }; rrlda = derive2 { name="rrlda"; version="1.1"; sha256="06n9jah190cz25n93jlb5zb0xrx91bjvxgswwdx9hdf0fmwrpkvz"; depends=[glasso matrixcalc mvoutlier pcaPP]; }; rroad = derive2 { name="rroad"; version="0.0.5"; sha256="09q5r9wq3vm5wy5aigx9wffv7m0njlp3sma1djm6cp7hhwgss0nj"; depends=[]; }; - rromeo = derive2 { name="rromeo"; version="0.1.0"; sha256="0dab3gcdpc5w9nxjw02348vj8cbrr8324aw982kjlrwkpjnvmfv5"; depends=[httr xml2]; }; + rromeo = derive2 { name="rromeo"; version="0.1.1"; sha256="1jjk5b41qg22a0zpjha2p2mfcb5q00gicqlxhkahjbj49q0c3mn9"; depends=[httr xml2]; }; rrpack = derive2 { name="rrpack"; version="0.1-11"; sha256="1bchha6dbkgc1raiks22cjmqzsias0c0frz8il67napkgmwlqk6d"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; }; rrr = derive2 { name="rrr"; version="1.0.0"; sha256="0sv6k70mv325yjm8yjy4dw8cqc0xc071iiv94fk1l1yfz0n67prz"; depends=[dplyr GGally ggplot2 magrittr MASS plotly Rcpp]; }; rrscale = derive2 { name="rrscale"; version="0.1.3"; sha256="0pf5pac883f1p6gidy2k1nrbrygi1va8r5h785449dhphx806bf5"; depends=[abind DEoptim doParallel foreach]; }; - rrtable = derive2 { name="rrtable"; version="0.1.0"; sha256="1rvqb32fr63dkm5kz291pxzli8yi10k76v0lm1qdn28cx1l6ff3y"; depends=[devEMF editData flextable ggplot2 magrittr moonBook officer purrr readr rmarkdown rvg shiny stringr ztable]; }; + rrtable = derive2 { name="rrtable"; version="0.1.7"; sha256="1f52f9zvmqyw8xc6s83kclwkraqndkj6gmqvn2qyy85zsxl9b8pm"; depends=[devEMF editData flextable ggplot2 magrittr moonBook officer purrr readr rmarkdown rvg shiny stringr ztable]; }; rrum = derive2 { name="rrum"; version="0.2.0"; sha256="0w0f2n14if2b8x7n6v8y8q2vghd8j7xm1xhpxnvy3z50flinwgm7"; depends=[Rcpp RcppArmadillo rgen simcdm]; }; rsMove = derive2 { name="rsMove"; version="0.2.7"; sha256="0an5kknfap7hrg62gvdvrylx79p6fjdmbryhzlrj60i8n7cnc1c1"; depends=[caret ggplot2 lubridate plyr pryr raster Rcpp RCurl sp]; }; rsae = derive2 { name="rsae"; version="0.1-5"; sha256="1f3ry3jwa6vg2vq2npx2pzzvfwadz8m48hjrqjk860nfjrymwgx5"; depends=[]; }; rsample = derive2 { name="rsample"; version="0.0.5"; sha256="0lkwhydb8csg24zkpsblyykzfsjqr930h46kbpm2wk9kgygkfspd"; depends=[dplyr furrr generics purrr rlang tibble tidyr tidyselect]; }; rsatscan = derive2 { name="rsatscan"; version="0.3.9200"; sha256="00vgby24jknq8nl7rnqcwg7gawcxhwq8b7m98vjx2hkqx39n4g21"; depends=[foreign]; }; - rscala = derive2 { name="rscala"; version="3.2.16"; sha256="0c07lq3qhg4h5n0g0s1i11q5jrlijvidrdy3h1ln262mn2wqn8az"; depends=[]; }; + rscala = derive2 { name="rscala"; version="3.2.18"; sha256="0ydz98i90hy4fq63avwlqghfqvqj503cmgbg5ijrd5h2y7ammpib"; depends=[]; }; rscielo = derive2 { name="rscielo"; version="1.0.0"; sha256="005nmi18831a2krl2xhj74ya9mfjq8zzccjafnfxha89x8ygxsa3"; depends=[dplyr httr magrittr purrr rvest stringr tibble xml2]; }; rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; }; rsconnect = derive2 { name="rsconnect"; version="0.8.16"; sha256="05ii0p0p7xpf8z0c1594s5q7wpwcs7lmlddrd67s5p2ka5m8qwiz"; depends=[curl digest jsonlite openssl packrat rstudioapi yaml]; }; - rscontract = derive2 { name="rscontract"; version="0.1.0"; sha256="0hhhndvrk9z6izdq4vh95bi9879k0svgpmhajrnm20xc5sb136jf"; depends=[]; }; + rscontract = derive2 { name="rscontract"; version="0.1.1"; sha256="1s19p9cga0qm1diblqf3rmcbm3agiimq4lhfgk004cg7rhaa1lyh"; depends=[]; }; rscopus = derive2 { name="rscopus"; version="0.6.6"; sha256="0kl6rv0j2396b8izvy0lp1f588il6w3yhq6d4swv8x8z14rsgcpw"; depends=[dplyr glue httr jsonlite plyr tidyr]; }; rscorecard = derive2 { name="rscorecard"; version="0.14.0"; sha256="0r951j0n841ihlig2aw76vxdd31zbx98k4sz92nmi8zb69669d5w"; depends=[dplyr httr jsonlite lazyeval magrittr purrr tidyr tidyselect]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; rsdmx = derive2 { name="rsdmx"; version="0.5-13"; sha256="1lgy5nbrl4frfn805lghyx1gl2h8lkvgk07365jyvb8rzfcl43av"; depends=[plyr RCurl XML]; }; rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; }; rsem = derive2 { name="rsem"; version="0.4.6"; sha256="16nsbp4s20396h2in0zymbpmsn24gqlbik0vgv86zhy1yg1rz9ia"; depends=[lavaan MASS]; }; - rsf = derive2 { name="rsf"; version="0.2.0"; sha256="0p9h61nvr5p42c7cjqgsvv45ycircw8jd4h3075rly08jbp02nim"; depends=[bookdown knitr magrittr rlang usethis yaml ymlthis]; }; - rsgcc = derive2 { name="rsgcc"; version="1.0.6"; sha256="12f8xsg6abmhdgkrrc8sfzmv4i1pycq1g0jfad664d17yciw7rhh"; depends=[biwt cairoDevice fBasics gplots gWidgets gWidgetsRGtk2 minerva parmigene snowfall stringr]; }; - rsimsum = derive2 { name="rsimsum"; version="0.7.0"; sha256="1c63nzvyrnjva99hh3ikijpgsmnks8y8qsqxshxn9s1gjix7il5p"; depends=[checkmate ggplot2 ggridges rlang scales]; }; + rsf = derive2 { name="rsf"; version="0.2.1"; sha256="0bmx9c8cxnn46bwr2za74kn6z2hyjdhj0i3c58c25pqhggyymxkb"; depends=[bookdown knitr magrittr rlang usethis yaml ymlthis]; }; + rsimsum = derive2 { name="rsimsum"; version="0.8.0"; sha256="0nszqffzh9lnds6grjpjyvv78ykvk4aj3s1dwabxi43qqk1p02f1"; depends=[checkmate ggplot2 ggridges rlang scales]; }; rsinaica = derive2 { name="rsinaica"; version="0.6.1"; sha256="1ba19b2fgnnl50qp6hgjppgxbadghq68qap9f0m51k2k3ijgfiwn"; depends=[dplyr httr jsonlite lubridate stringr]; }; rskey = derive2 { name="rskey"; version="0.4.1"; sha256="0l9z5zbii4wi7da6cl9mr62zn72pc3dgfhk6dp8sjx4jbzpa94s3"; depends=[berryFunctions miniUI rstudioapi shiny]; }; rsleep = derive2 { name="rsleep"; version="1.0.1"; sha256="0kjb5sgv1y50cqg54dy5cx9ngr64hx2bhfav314vm2alnxsk19jh"; depends=[edfReader ggplot2 jsonlite phonTools signal]; }; @@ -12993,46 +13013,47 @@ in with self; { rsoi = derive2 { name="rsoi"; version="0.5.1"; sha256="17b78m3m0n191xbds70zvpwk27xw70phm66p6i26smc1zwg94y89"; depends=[curl memoise]; }; rsolr = derive2 { name="rsolr"; version="0.0.9"; sha256="1mxvzb7wvm1agv35r82pr1hxa3fimixcwf36j98qjlxj9p7valrw"; depends=[BiocGenerics graph RCurl restfulr rjson S4Vectors XML]; }; rspa = derive2 { name="rspa"; version="0.2.5"; sha256="0jvrr3jaw66zqi5pal9dycpac24dn9v7lf2m63q01wmd8m3mlnv9"; depends=[lintools validate]; }; - rsparkling = derive2 { name="rsparkling"; version="0.2.18"; sha256="0lhq9jxxib2krl298hy3sglh5lm5lyibknigpbxx68pn71jwp1hm"; depends=[h2o sparklyr]; }; + rsparkling = derive2 { name="rsparkling"; version="0.2.19"; sha256="1rb43lslhlg8jpniirzch8gnl86x6d3shcfp9fpxm0qd3fqrlm6z"; depends=[h2o sparklyr]; }; rsparse = derive2 { name="rsparse"; version="0.3.3.4"; sha256="1n4h33vrbgia9pm04clji3qgvnamn53v334mj7z1ksx121avli38"; depends=[data_table float lgr Matrix mlapi Rcpp RcppArmadillo RhpcBLASctl]; }; rsppfp = derive2 { name="rsppfp"; version="1.0.4"; sha256="123yv54i58xj4wx9n08qp50mm4l271fm1zhzimrxx22wn2bg8zy5"; depends=[doParallel dplyr foreach igraph stringr tidyr]; }; rsq = derive2 { name="rsq"; version="1.1"; sha256="0pvnyf875jybid16mg1y3dmnlrk1vahckhr5zaai1a0k4i6mh4jf"; depends=[MASS]; }; rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; }; rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; }; - rstan = derive2 { name="rstan"; version="2.19.2"; sha256="1nh8sm97ck1fwmqj5ia70p5w8alcagx7y2956a3n5k97qfwwxr1i"; depends=[BH ggplot2 gridExtra inline loo pkgbuild Rcpp RcppEigen StanHeaders]; }; - rstanarm = derive2 { name="rstanarm"; version="2.19.2"; sha256="1k4sal4pmyyfb0n9k0x6n7kd04xq75scr6j357vpryaz8dfn46iz"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders survival]; }; + rstan = derive2 { name="rstan"; version="2.19.3"; sha256="128ndwjrhf8b1qvvqz4bl13qlm8718z9qs5ryc6gsdr3vk65s0np"; depends=[BH ggplot2 gridExtra inline loo pkgbuild Rcpp RcppEigen StanHeaders]; }; + rstanarm = derive2 { name="rstanarm"; version="2.19.3"; sha256="0gxjq8bdlvdd8kn3dhp12xlymdab036r7n12lzmd3xlkl4cnxq3s"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen RcppParallel rstan rstantools shinystan StanHeaders survival]; }; rstanemax = derive2 { name="rstanemax"; version="0.1.1"; sha256="0yvinnz0ybrarl1p36ibaiflava1hhdnh4avjgc5iq0b3nr6x42g"; depends=[BH dplyr ggplot2 magrittr purrr Rcpp RcppEigen rstan rstantools StanHeaders tidyr]; }; rstantools = derive2 { name="rstantools"; version="2.0.0"; sha256="1il0pn4ksbdkska5fmhvgaicvwnnc6cs08g6ags9fj1xkjiqmrsa"; depends=[desc Rcpp]; }; rstap = derive2 { name="rstap"; version="1.0.3"; sha256="176z39k54l5r60md6wziz828c46alv2pmqivvmhvb358crrb8x7n"; depends=[abind bayesplot BH dplyr ggplot2 lme4 loo Matrix nlme pracma Rcpp RcppEigen rstan rstantools StanHeaders]; }; - rstatix = derive2 { name="rstatix"; version="0.3.1"; sha256="0iiv0l3rm5b2y018hm65n4385iq9ixwj4qgf1n4f71y0hl36bg91"; depends=[broom car corrplot dplyr magrittr purrr rlang tibble tidyr tidyselect]; }; + rstatix = derive2 { name="rstatix"; version="0.4.0"; sha256="099kaldzlkyxg7af4wrhpqp07d3ha1bm9zk4fcdkgqw9nknbp00z"; depends=[broom car corrplot dplyr magrittr purrr rlang tibble tidyr tidyselect]; }; rstatscn = derive2 { name="rstatscn"; version="1.1.3"; sha256="07w7ixq1faq7mif2ksxcgl8n6ali9h0wx0nb2yz4kbdgvz68r7b9"; depends=[httr jsonlite]; }; rstiefel = derive2 { name="rstiefel"; version="1.0.0"; sha256="0g09fpp3432v78gqgn0hiva6zqr8yqn379wz4428wanmiskqr3f0"; depends=[]; }; rstpm2 = derive2 { name="rstpm2"; version="1.5.1"; sha256="0p1zqqjss8i5wca4qvr56d6p9ak20ki4cfbxja1wrhkp4kii29r6"; depends=[bbmle deSolve fastGHQuad mgcv Rcpp RcppArmadillo survival]; }; - rstream = derive2 { name="rstream"; version="1.3.5"; sha256="1wprsnwl63cc4a6j5h18r09wlh32bq5z6hj6r5klp7rkpjchsplp"; depends=[]; }; - rstudioapi = derive2 { name="rstudioapi"; version="0.10"; sha256="15mbw607ncdf53mgga76n3va5zzdcjqz14nb0jcn9axwccqamic0"; depends=[]; }; - rsubgroup = derive2 { name="rsubgroup"; version="0.6"; sha256="1hz8rnbsl97ch6sjwxdicn2sjyn6cajg2zwmfp03idzpb3ixlk7l"; depends=[foreign rJava]; }; + rstream = derive2 { name="rstream"; version="1.3.6"; sha256="1mr869hff5wdpw6a7x71366y8dxf9vljbb11fssfkhcf7hm2ipnj"; depends=[]; }; + rstudioapi = derive2 { name="rstudioapi"; version="0.11"; sha256="0srh0m4mw4k6s7spwb84l4cx4xnn04cp5cjxi0fwza7bwavpzq0k"; depends=[]; }; + rsubgroup = derive2 { name="rsubgroup"; version="0.9"; sha256="060kcp3agjjfj23wxsdbmiis9n9hlwydr7x8yj7l6328ibalp61a"; depends=[foreign rJava]; }; rsurface = derive2 { name="rsurface"; version="1.1.0"; sha256="1pymbgvr72nqd66wap5wrcizzx2k9bfr6vkxv6dkvjmi8q7jl2gv"; depends=[plotly rsm]; }; rsurfer = derive2 { name="rsurfer"; version="0.2"; sha256="14zd8fhak12yha6miwb84085722v5ipk8lagijhc6af291kp70i9"; depends=[gdata stringr]; }; - rsvd = derive2 { name="rsvd"; version="1.0.2"; sha256="0fia77y5fxnhwkcxlgp98ygb8fdfraky75x80hkf7kvvpwc5rzn8"; depends=[Matrix]; }; + rsvd = derive2 { name="rsvd"; version="1.0.3"; sha256="1fvrw46fl5xb2akaa4mp8nja4h7nn4bdhnjdrk22fsdfqc7hwmhk"; depends=[Matrix]; }; rsvg = derive2 { name="rsvg"; version="1.3"; sha256="11mccgf6hfskg45wqc114sx3qy2r494y6axdf73z6xwhs1wpm97g"; depends=[]; }; rsyslog = derive2 { name="rsyslog"; version="1.0.1"; sha256="1i33bpv894jk7cixsvn85h1g532zj39f8dfqq8cyzgsav9wba2y4"; depends=[]; }; rt_test = derive2 { name="rt.test"; version="1.18.7.9"; sha256="0ywkdjvfzmrmmsfkz4jbhwzbzv7wivx80xy8wr92dch1862h6ias"; depends=[]; }; rt3 = derive2 { name="rt3"; version="0.1.2"; sha256="1fqbymkz4csavkxrs26glzrh0kw3qy9x5smgddgda9a1dxh9ljkm"; depends=[]; }; rtape = derive2 { name="rtape"; version="2.2"; sha256="0q7rs7pc1k1kayr734lvh367j5qig2nnq5mgak1wbpimhl7z3wm7"; depends=[]; }; - rtdists = derive2 { name="rtdists"; version="0.10-0"; sha256="0dm4nx94xfg6bs7v2m4makk4qx4zw1xh49nihpsaj8vx1ng4lp89"; depends=[evd gsl msm Rcpp]; }; + rtdists = derive2 { name="rtdists"; version="0.11-2"; sha256="0fap15bkxn2azd5a4j3q9mxpif5ff3y2vb8rm4xnh8l0sl1lw7cs"; depends=[evd gsl msm Rcpp]; }; rtematres = derive2 { name="rtematres"; version="0.2"; sha256="1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2"; depends=[gdata plyr RCurl XML]; }; + rtemps = derive2 { name="rtemps"; version="0.4.0"; sha256="04ipklqsx4c7h95zj76g55h5kq33mabkydzr9lcvsfrc7ms7jjmi"; depends=[bookdown DT ggplot2 knitr rmarkdown xfun]; }; rtext = derive2 { name="rtext"; version="0.1.21"; sha256="0j2jfz0mz9552dwa78d527lxipmj5ql8q8np8qq5jw4ka6wj5lbs"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; }; rtf = derive2 { name="rtf"; version="0.4-14"; sha256="1v4vb2ijqlbqcjqdhf85kfzs67whkhm6ygp5cw8xa6qw179vkgd5"; depends=[R_methodsS3 R_oo]; }; - rtfbs = derive2 { name="rtfbs"; version="0.3.15"; sha256="1447wjdjcc18sj6ngh22zfc50jk8zshdgkwp1d7ba4n5qsj7b2fl"; depends=[rphast]; }; - rticles = derive2 { name="rticles"; version="0.13"; sha256="0di9vdvz4kcdzahghbc77wpgb00c8lb3fjdsn1jrnr4whznl5fiq"; depends=[knitr rmarkdown tinytex xfun yaml]; }; - rtide = derive2 { name="rtide"; version="0.0.5"; sha256="0ns79xkkl141bbns8zlvx3gf48k4a03qa21pjyhnhgkm9lsihwfc"; depends=[abind checkr lubridate]; }; + rticles = derive2 { name="rticles"; version="0.14"; sha256="1377fib4asazhhki4aajvld0wa35vd3zjvyl3lf2hjm2qk3vyak7"; depends=[knitr rmarkdown tinytex xfun yaml]; }; + rtide = derive2 { name="rtide"; version="0.0.7"; sha256="1l2fradbknlbgsm6nj89k9bhg7fxdrh0wcnar0mdgqqcr8qzs8hk"; depends=[abind chk dttr2 tibble]; }; rtiff = derive2 { name="rtiff"; version="1.4.7"; sha256="0l0chjbn8kipnhi37zshphxmxga6id39rm5gzz5gjrv8bnaaxxqb"; depends=[pixmap]; }; rtika = derive2 { name="rtika"; version="1.23"; sha256="0m27vv4jb39lqnv0cnx6wznn3h8ia2if0np670wf1345v9i4ygyh"; depends=[curl digest rappdirs sys]; }; rtimicropem = derive2 { name="rtimicropem"; version="1.4.0"; sha256="0z6bnzks8mcb871m3z5b3cd883hj1i17swjgly005hvwbvi9h61f"; depends=[changepoint dplyr fs ggplot2 knitr lazyeval lubridate R6 rbokeh readr stringr tibble tidyr]; }; rtip = derive2 { name="rtip"; version="1.1.1"; sha256="0lfny8nvgnf90xsmgmr32nzjbw8117m4vw7d0bc3xm4pzpnymjdq"; depends=[boot ggplot2 mvtnorm plyr rootSolve]; }; + rtist = derive2 { name="rtist"; version="1.0.0"; sha256="0p4jlz0z0nbvmixdrym6nqagz2i28zbsijcj785rd6wiy72d2hg5"; depends=[]; }; rtk = derive2 { name="rtk"; version="0.2.5.8"; sha256="1ybppi5h86gb324hlkx91m2kk2dw7hi5k5l2fh5h1xnlqjv55n0b"; depends=[Rcpp]; }; rtkore = derive2 { name="rtkore"; version="1.5.5"; sha256="0srk0ih4gbmhb1pl6zf8sjwrkdmgws9cl1397fcqv6l3bc376622"; depends=[inline Rcpp]; }; - rtmpt = derive2 { name="rtmpt"; version="0.1-17"; sha256="0hp4hia8fp9kbs25hgbjv2nr3h0lkn4v4b0j0c4a9bfm2mrvy0l9"; depends=[coda data_table LaplacesDemon loo stringr truncnorm]; }; + rtmpt = derive2 { name="rtmpt"; version="0.1-18"; sha256="03ip66wkvg578gmaqq8990216jss8rlayfxb0b62imam5a0l4p3i"; depends=[coda data_table loo matrixcalc stringr truncnorm]; }; rtop = derive2 { name="rtop"; version="0.5-14"; sha256="1wwllckginnzisapbklpsizy47db24r83xahq4qsd8zhqvv9yj33"; depends=[gstat sp]; }; rtrek = derive2 { name="rtrek"; version="0.3.0"; sha256="0nfkmcyrb1gbgjjy62ffjlg6x93zy4s4qg6ii98gjbn0jp6pcj1j"; depends=[downloader dplyr ggplot2 jpeg jsonlite magrittr memoise purrr rvest tibble tidyr xml2]; }; rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; @@ -13046,29 +13067,31 @@ in with self; { rtypeform = derive2 { name="rtypeform"; version="2.0.0"; sha256="00as49l9plncc25bn93x36hpxnxachsh382ivhq6k9d9gi8424c0"; depends=[dplyr glue httr jsonlite lubridate purrr tibble tidyr]; }; rubias = derive2 { name="rubias"; version="0.3.0"; sha256="18sivq5ilq14mqs62vh6l24fcayvd7ffdbva94ir6n0gx9axmm22"; depends=[dplyr gtools magrittr Rcpp RcppParallel readr rlang stringr tibble tidyr]; }; rucm = derive2 { name="rucm"; version="0.6"; sha256="1n6axmxss08f2jf5impvyamyhpbha13lvrk7pplxl0mrrrl5g0n8"; depends=[KFAS]; }; - rucrdtw = derive2 { name="rucrdtw"; version="0.1.3"; sha256="0wbh9zbgqf5bk1ix5qry18lhgdqk90pn5xnv401268gldjy4z777"; depends=[Rcpp]; }; - rugarch = derive2 { name="rugarch"; version="1.4-1"; sha256="05dlzrv9ahfwqq5bmd9vk13zvzwgf1zyq65kp3qf94v9sp5xr5kx"; depends=[chron expm ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; }; + rucrdtw = derive2 { name="rucrdtw"; version="0.1.4"; sha256="0865x8i2n63xjbq0pzalm4gd6rpg72yrcsm4rw40a3kzy2svvnlm"; depends=[Rcpp]; }; + rugarch = derive2 { name="rugarch"; version="1.4-2"; sha256="12rrxdj5am3qjg1iya6g8a3ak167dd4sqgfmpa4ims588gj5szkm"; depends=[chron expm ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; }; ruimtehol = derive2 { name="ruimtehol"; version="0.2.3"; sha256="073qb7g9j6zkk6hxf78y7ymnmc1s4hbjxxlymjhxpvjfbg4xpslw"; depends=[BH Rcpp]; }; ruin = derive2 { name="ruin"; version="0.1.1"; sha256="124xs1c2mjfy6z0bp83rwkqw2y73g77xwn3q4yd2xw0v2frnpvpz"; depends=[ggplot2]; }; - ruler = derive2 { name="ruler"; version="0.2.1"; sha256="01b5qn6b69hhl9df6sr187w16z5hj6vxb8yi77y2rghkcrnm12i9"; depends=[dplyr keyholder rlang tibble tidyr]; }; + ruler = derive2 { name="ruler"; version="0.2.2"; sha256="190yvz6hpqmcjydcjy69fr6jya3la325fpz1a5g38xhrj6a9v4kn"; depends=[dplyr keyholder rlang tibble tidyr]; }; + runes = derive2 { name="runes"; version="0.0.1"; sha256="0aq4wlxwc00a39lgfvr2pyhh7hcrb3n19mm83qvr8kyz30dhghx9"; depends=[]; }; runittotestthat = derive2 { name="runittotestthat"; version="0.0-2"; sha256="15zdcvqkr5ivq6wk6dw8k6diginc6z7mdc18pswim90d99j2g9sm"; depends=[assertive RUnit]; }; runjags = derive2 { name="runjags"; version="2.0.4-6"; sha256="0w97s1j5v05fn4nclqwg56hl9vz6vi2l6sp042r6iyh024fsyg22"; depends=[coda lattice]; }; - runner = derive2 { name="runner"; version="0.3.1"; sha256="0dxg4s5cldh112bk65ymj2ir2zi7n47rs72zcwr9abp65hlg32gf"; depends=[Rcpp]; }; + runner = derive2 { name="runner"; version="0.3.2"; sha256="0m2xaj2w0186frzg29jwivf7gxfikvy14w53qpcybgnd1ng54l3a"; depends=[Rcpp]; }; runstats = derive2 { name="runstats"; version="1.1.0"; sha256="0n9348af60j8a2mwgbafabspb4nm45ry92zlzmynja06zyx8lb2d"; depends=[fftwtools]; }; rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; }; rusk = derive2 { name="rusk"; version="0.1.1"; sha256="0a6vbcnfzlfq9fmibiy0cwcfix65qhxq4f7wc7d53riga82s00lk"; depends=[dplyr ggforce ggplot2 reshape2 shiny tidyr]; }; rust = derive2 { name="rust"; version="1.3.8"; sha256="05xqvbkjckwxmhgcl9dqb7y20jq8b6f2fad5dikvbq5l8pwfygxj"; depends=[Rcpp RcppArmadillo]; }; ruta = derive2 { name="ruta"; version="1.1.0"; sha256="1qr2ryz55h2j3wlwg0535lhmk2ydm0idfxl07rlfxq1pi32cjms1"; depends=[keras purrr R_utils]; }; + rutifier = derive2 { name="rutifier"; version="1.0.4"; sha256="045pr8apd105azs1glpwqrbamglqddxfpml9yrfrlaivz3fjd9l8"; depends=[R_utils]; }; ruv = derive2 { name="ruv"; version="0.9.7.1"; sha256="1n4q9mrp9f644spbns6bbnzmlabrg90hwkdfg3hnm3rxp9b4xid0"; depends=[ggplot2 gridExtra scales]; }; - rv = derive2 { name="rv"; version="2.3.3"; sha256="1h5lhy87v88b70a7pbq5xirskm6ih9fk90n6mzp1nmkr7w1d3zai"; depends=[]; }; + rv = derive2 { name="rv"; version="2.3.4"; sha256="0kn56agxv6p861r247yhwfkp8pj33bghy5444a6f3y22yyzc8ngz"; depends=[]; }; rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; }; rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; }; rvalues = derive2 { name="rvalues"; version="0.6.3"; sha256="1bsdvwcijb75f27c8padjx8663as667axc4skwa6xgv5y423kbd0"; depends=[]; }; - rvcheck = derive2 { name="rvcheck"; version="0.1.7"; sha256="1a3xlzi4n1rqiapfa180aif7n7nws8pbg8k3nk7ccaczvmni38aw"; depends=[BiocManager rlang]; }; + rvcheck = derive2 { name="rvcheck"; version="0.1.8"; sha256="0627bc8qmhxmd63yh6f90qni3qw1zwdpxjln2qbychzmzd4am9ac"; depends=[BiocManager rlang]; }; rversions = derive2 { name="rversions"; version="2.0.1"; sha256="1ic6sxnyya24d5xsxjg3fba73fhya9fhs0kaf66yha6nwxj1zv2i"; depends=[curl xml2]; }; - rvertnet = derive2 { name="rvertnet"; version="0.7.0"; sha256="01z3ij5z21v901hz4l9173r4pa9jz2nl7bx086ka1bxvcy0dgqgj"; depends=[crul dplyr ggplot2 jsonlite maps]; }; + rvertnet = derive2 { name="rvertnet"; version="0.8.0"; sha256="1j8kgyzcn14yl44lnxc8f83wpmgpdzx5aiw91zjbjkajj6bgzrpn"; depends=[crul dplyr ggplot2 jsonlite maps]; }; rvest = derive2 { name="rvest"; version="0.3.5"; sha256="0r0a5jic09xw5pk0x42pr99r3zab5m9s4x85ymx1sl769jz42zqf"; depends=[httr magrittr selectr xml2]; }; - rvg = derive2 { name="rvg"; version="0.2.3"; sha256="1psqjwn80vqfvfl9hyx0rabqrrlqp34hrwrbg8ghsd65f0f1ncgm"; depends=[gdtools officer Rcpp rlang xml2]; }; + rvg = derive2 { name="rvg"; version="0.2.4"; sha256="12ghjppq5igic2mw8k3p5cnywm26c615ll3j3a9fasyyzkxx6i05"; depends=[gdtools officer Rcpp rlang xml2]; }; rvgtest = derive2 { name="rvgtest"; version="0.7.4"; sha256="1lhha5nh8fk42pckg4ziha8sa6g20m0l4p078pjj51kz0k8929ng"; depends=[]; }; rviewgraph = derive2 { name="rviewgraph"; version="1.2"; sha256="0qw1fdfwg2763a1k1qmryblw5rpagsi5p70rs7fj256zfcjvwrz8"; depends=[rJava]; }; rvinecopulib = derive2 { name="rvinecopulib"; version="0.5.1.1.0"; sha256="1616xqchjyqqf2nmgx5rlpnw8g4696lvlpmrx7jav2cnvkff7s2i"; depends=[assertthat BH kde1d lattice Rcpp RcppEigen RcppThread wdm]; }; @@ -13079,7 +13102,7 @@ in with self; { rwc = derive2 { name="rwc"; version="1.11"; sha256="1qhgkbkp4nz0wq5c4x8232xiszpiyzcdklfgvpnx4cbp3bbfdi4g"; depends=[MASS Matrix mvtnorm raster]; }; rwebstat = derive2 { name="rwebstat"; version="1.0.2"; sha256="14mzqs4qjb3qgpci1a1c4sj803mjnzv9j910zmhkg5l8bx9nj5xw"; depends=[dplyr getPass httr readr]; }; rwfec = derive2 { name="rwfec"; version="0.2"; sha256="0wmalfms59zi8jdn2s2qbcdckfkifl9vg19hzx4389mm5gk6qsbh"; depends=[Rcpp]; }; - rwhatsapp = derive2 { name="rwhatsapp"; version="0.2.1"; sha256="1lwa8x2a2k7vspll4k8g7l09cvpxxnpv2476x50fzvn126881g5i"; depends=[stringi tibble]; }; + rwhatsapp = derive2 { name="rwhatsapp"; version="0.2.2"; sha256="00cgczgim3ls5jjaklpwfyf24794zhpdjj9pl9fkw20fxhz91bpd"; depends=[stringi tibble]; }; rworldmap = derive2 { name="rworldmap"; version="1.3-6"; sha256="1q1h0n9qr0m5pdx10swrh9ddsvdj8kv5nqngrf3lnx9rg9iwivjk"; depends=[fields maptools sp]; }; rworldxtra = derive2 { name="rworldxtra"; version="1.01"; sha256="183z01h316wf1r4vjvjhbj7cg4xarn4b8qbmnn5y7nrrdndzi163"; depends=[sp]; }; rwstats = derive2 { name="rwstats"; version="0.1"; sha256="10jj2lkilysz7mmysblj6l4jjc560rqsps0ivkvyr7caj8gfhdlb"; depends=[]; }; @@ -13093,9 +13116,10 @@ in with self; { ryouready = derive2 { name="ryouready"; version="0.4"; sha256="1d9z3paxcrkwsgn5g83x57jwz2iqarks30x0bwg48i5ispw6xbr3"; depends=[car ggplot2 stringr]; }; rysgran = derive2 { name="rysgran"; version="2.1.0"; sha256="1l2mx297iyipap8cw2wcw5gm7jq4076bf4gvgvij4q35vp62m85z"; depends=[lattice soiltexture]; }; rzeit2 = derive2 { name="rzeit2"; version="0.2.3"; sha256="0fvkpc6l57s64m0zx8fzazvyhpn5wxa1cb185h20x8hjf069i5lf"; depends=[anytime httr jsonlite openssl rvest stringr xml2]; }; - rzmq = derive2 { name="rzmq"; version="0.9.6"; sha256="05j34fwwqlzq9nfkaafl39aqc0nvljf22pndqhj151gpnrpgr8w0"; depends=[]; }; + rzmq = derive2 { name="rzmq"; version="0.9.7"; sha256="0iasjaka3gx616l5bxyg2k0fi33hldaplvs0h03j6jpxfmxvcisz"; depends=[]; }; s2 = derive2 { name="s2"; version="0.4-2"; sha256="17r3xn2ldlz7qpdwrp0mdm7pfrdfwibyv8biaxq4b6qx0p7wvw6n"; depends=[Rcpp]; }; s20x = derive2 { name="s20x"; version="3.1-28"; sha256="1fx5206gy7cq4n0xrdxcvnd913i08yjjz39ldjm3a98sfz6xj636"; depends=[]; }; + s2dv = derive2 { name="s2dv"; version="0.0.1"; sha256="06jn9f8fpkpi1qz0g7pjyszdwckg6llb2lnf0micj8v1js7phym8"; depends=[abind bigmemory ClimProjDiags GEOmap geomapdata mapproj maps multiApply ncdf4 plyr]; }; s2dverification = derive2 { name="s2dverification"; version="2.8.6"; sha256="1nvmc3mpdqrcnv17vk8rjd7mh55pj68y2ffiia09lc8h84r3zxil"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; s2net = derive2 { name="s2net"; version="1.0.1"; sha256="1f6lc8azx8lax7jc5ggzirwnp5d9ka2plimfkg70vx783xf56zaw"; depends=[MASS Rcpp RcppArmadillo]; }; s4vd = derive2 { name="s4vd"; version="1.1-1"; sha256="1rp3z42nxmrvb942h3c5cl544lngzx7nrnnr4zjw7dq495bym7yp"; depends=[biclust foreach irlba]; }; @@ -13117,8 +13141,7 @@ in with self; { saccades = derive2 { name="saccades"; version="0.1-1"; sha256="138a6g3hjmcyvflpxx1lhgxnb8svrynplrjnvzij7c4bzkp8zip6"; depends=[zoom]; }; sadists = derive2 { name="sadists"; version="0.2.3"; sha256="17jlzx5h5l1w7riz0rs99w31n6lxnnxwzbzqn2z5r292j2nxvmkw"; depends=[hypergeo orthopolynom PDQutils]; }; sads = derive2 { name="sads"; version="0.4.2"; sha256="1j6vdjvpnbqp4kwbvhcl8p51ln29mmk9n150718wsqlifb8d1lw9"; depends=[bbmle GUILDS MASS poilog VGAM]; }; - sae = derive2 { name="sae"; version="1.2"; sha256="1fai9lkyyssnkkdrjrrx7vzj88nglmd4bkzan3hdhrc49abclp59"; depends=[lme4 MASS]; }; - sae2 = derive2 { name="sae2"; version="1.0-1"; sha256="0cnqlacglwyx4cdm3wl3j3g2xv2sx3921mnzk2v0bk704i9y7qq3"; depends=[MASS survey]; }; + sae = derive2 { name="sae"; version="1.3"; sha256="1ncrlzgnga9pfa2j8x1y6axl2665rp08aff98zrim6gq6n6yap8z"; depends=[lme4 MASS]; }; saeRobust = derive2 { name="saeRobust"; version="0.2.0"; sha256="1bdfrsm59xwkga0kxl3r5n83mhhkyzj7gplrgx26gyflashyd1zc"; depends=[aoos assertthat ggplot2 magrittr MASS Matrix memoise modules pbapply Rcpp RcppArmadillo spdep]; }; saeSim = derive2 { name="saeSim"; version="0.10.0"; sha256="0nh8x2v0g8i0rjq4s5q0ayhyxhl5p0126plmd4vnnhaifm6pn0q3"; depends=[dplyr functional ggplot2 MASS parallelMap spdep]; }; saemix = derive2 { name="saemix"; version="2.3"; sha256="08n1syv8wkf1nqz8i1n3ippyp63g56xf8xqgczxm630r6802yqab"; depends=[]; }; @@ -13128,11 +13151,11 @@ in with self; { safetyGraphics = derive2 { name="safetyGraphics"; version="1.1.0"; sha256="1s8xwx014nihn13v6rpwy11sb3yzfyj3alb88y47wp1kh39d7f0q"; depends=[dplyr DT haven htmlwidgets jsonlite magrittr purrr rlang rmarkdown shiny shinybusy shinyjs shinyWidgets stringr tibble tidyr]; }; sail = derive2 { name="sail"; version="0.1.0"; sha256="1wrh2dam5lblascqd8gl76jks72ys1amz84c6p08y8ykdmn2saq1"; depends=[gglasso glmnet]; }; salesforcer = derive2 { name="salesforcer"; version="0.1.3"; sha256="1nhw7l6bg375dqqcaxjfvhjm9sb1jsil5wayhffdxc9lqdxrd5a2"; depends=[data_table dplyr httr jsonlite lubridate purrr readr XML xml2]; }; - salso = derive2 { name="salso"; version="0.1.11"; sha256="1rxfnh575hl3zpsm3r0mscfr0hy9v2kss142ggzrz49a4kskpa1x"; depends=[]; }; + salso = derive2 { name="salso"; version="0.1.16"; sha256="1xvzvy0s1718n9p71a6gb4dzg281drzzmpyda5j3b729aijni6bh"; depends=[]; }; salty = derive2 { name="salty"; version="0.1.0"; sha256="1dxq62yrkv416fy09l03slc7ci6mnwiyvjlsxhbqnj8yjy3kbhr6"; depends=[assertthat purrr stringr]; }; sambia = derive2 { name="sambia"; version="0.1.0"; sha256="15yz5lrjav5bs8m52crg3l43xmi4gf7wydji76p181ssyg43z2ln"; depends=[dplyr e1071 FNN mvtnorm pROC ranger smotefamily]; }; samc = derive2 { name="samc"; version="1.0.4"; sha256="03n49p2cjs1r3grmg4cw4pxn4lddx5084j4j8dj0g6l9sjzj64hz"; depends=[gdistance Matrix raster Rcpp RcppEigen]; }; - sampSurf = derive2 { name="sampSurf"; version="0.7-4"; sha256="0azs8d1d4cp5vzrlzpn2lbqmbha6rxq109apg6hr2hf7i81g19d7"; depends=[boot lattice latticeExtra raster rasterVis sp]; }; + sampSurf = derive2 { name="sampSurf"; version="0.7-5"; sha256="0ks95d1w5dvxz4vb850hb5v0w8xg6sil0gvddmd1mrrjkjqkk96f"; depends=[boot lattice latticeExtra raster rasterVis sp]; }; sampleSelection = derive2 { name="sampleSelection"; version="1.2-6"; sha256="1ph26v78sy8341d9iir6243vmvnrnan7gj5mr31913kpgkblcwfj"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; }; sampler = derive2 { name="sampler"; version="0.2.4"; sha256="12jjx3ci1yss8dj64bjdmz73cyjfkwb7b9zk4zm48lqv78k6wlv7"; depends=[dplyr purrr reshape tidyr]; }; samplesize = derive2 { name="samplesize"; version="0.2-4"; sha256="0n6z7jmf665lbj3g1mjy87a9fh53z85546bhrkmkgsysb0r9q6iq"; depends=[]; }; @@ -13158,11 +13181,12 @@ in with self; { sapa = derive2 { name="sapa"; version="2.0-2"; sha256="056xlh14dnzq4x7sbp7ff2k61jxy7110a742b502vz549qfrr5ds"; depends=[ifultools splus2R]; }; sapfluxnetr = derive2 { name="sapfluxnetr"; version="0.0.7"; sha256="0lnhg4apsvvyzyz89x778nhxjp4y0mycgajxjyb57wcwgn16gygm"; depends=[assertthat dplyr furrr ggplot2 glue lubridate magrittr purrr rlang stringr tibble tidyr]; }; saqgetr = derive2 { name="saqgetr"; version="0.1.19"; sha256="0sl0kngcsadgnx1lwhgbn9w4885dv0ih3c5vkvmz0bkvhdcjih9j"; depends=[curl dplyr fs lubridate magrittr purrr readr stringr tidyr]; }; - sarima = derive2 { name="sarima"; version="0.8.1"; sha256="03261mqv4l8wkan0phg7085qsy9q1vhhyx6bfnygjva7vvxafvpc"; depends=[dplyr FitAR FitARMA Formula KFAS lagged ltsa numDeriv PolynomF Rcpp RcppArmadillo Rdpack]; }; + sara4r = derive2 { name="sara4r"; version="0.0.7"; sha256="1la02rq16c3hvfg4dygz6himvs88nmry8616fzgnsbxzpddl5aw3"; depends=[raster rgdal RGtk2 sp]; }; + sarima = derive2 { name="sarima"; version="0.8.2"; sha256="0fyfba017p35g16b8xp9zvqp9dalhlgr7x5hpk10y29qh7k12z69"; depends=[dplyr FitAR FitARMA FKF Formula KFAS lagged ltsa numDeriv PolynomF Rcpp RcppArmadillo Rdpack]; }; sars = derive2 { name="sars"; version="1.2.1"; sha256="10j2cz66qpdicarxy2mx2hlmkvby3j83qrjm2irmfnwmscafg5f4"; depends=[cli crayon dplyr nortest numDeriv]; }; sas7bdat = derive2 { name="sas7bdat"; version="0.5"; sha256="0qxlapb6wdhzpwlmzlhscy3av7va3h6gkzsppn4sx5q960310an3"; depends=[]; }; sasMap = derive2 { name="sasMap"; version="1.0.0"; sha256="11vhhxhakqm1gsb3p4s4966sapmrqfyw79zfppbx5lnqi3xr0ngn"; depends=[readr stringi stringr]; }; - sass = derive2 { name="sass"; version="0.1.2.1"; sha256="02a5n0l8wya5v1iq2rb4hvc0gm23790jnjl7i3pzw2b5vkqd3l7s"; depends=[digest]; }; + sass = derive2 { name="sass"; version="0.2.0"; sha256="0qzrncsnp0zd8jyp4whss92m7llqsfccmp9p9r3gdc7hlq1amp3z"; depends=[digest fs htmltools rlang]; }; satellite = derive2 { name="satellite"; version="1.0.2"; sha256="1ib9g4cplksf9ymp8hcv843lv5bpar31w8h4wnmya5hjsdmlfiv4"; depends=[plyr raster Rcpp]; }; satscanMapper = derive2 { name="satscanMapper"; version="1.0.1"; sha256="1qr7xz7qp39nylkrx3smzga7rvi2z9yws8kbpmfk13avixr4asvy"; depends=[foreign RColorBrewer SeerMapper sp stringr]; }; saturnin = derive2 { name="saturnin"; version="1.1.1"; sha256="0cjp4h1s9ivn17v8ar48mxflaj9vgv92c8p9l2k5bc9yqx9mcs36"; depends=[Rcpp RcppEigen]; }; @@ -13180,15 +13204,16 @@ in with self; { sbtools = derive2 { name="sbtools"; version="1.1.9"; sha256="0azk4sa2h60yyfnskcicpiaqb3wrw0x64drb2z38y5k4jrrjbmlq"; depends=[curl httr jsonlite stringr]; }; sbw = derive2 { name="sbw"; version="1.0"; sha256="07lr2sh681q0wvyaf7ixif5riw9kfxv4hraxj8hzqaxcsip743vq"; depends=[MASS Matrix quadprog slam spatstat]; }; scBio = derive2 { name="scBio"; version="0.1.5"; sha256="12wch9dp7n9vigv7rp7i5b5sckn9vvckpclylinnbi1mhawxprv9"; depends=[doSNOW fields foreach LiblineaR limma raster sp]; }; + scMappR = derive2 { name="scMappR"; version="0.1.1"; sha256="1mfbjv7gpj63q5gwqcajjrnbhr918nvl41hk8ggk1l30wqg4k4r1"; depends=[downloader ggplot2 gProfileR gprofiler2 GSVA limSolve pcaMethods pheatmap Seurat]; }; scModels = derive2 { name="scModels"; version="1.0.1"; sha256="0n2sc2l3wy08i0xq7jwigkr42wz9gyhlirmjmma9plnmkbrx0rp4"; depends=[Rcpp]; }; scPDSI = derive2 { name="scPDSI"; version="0.1.3"; sha256="00z5qk14c1ndrd63rhvknkp3dn3ad8z8mf00p9sb8wbsi908md44"; depends=[Rcpp]; }; scRNAtools = derive2 { name="scRNAtools"; version="1.0"; sha256="0x0lniqhq6q87y08kkkyvmk1g5b8i73hm3h86ba8rcv0v0n7ap9a"; depends=[ALL ConsensusClusterPlus corrplot edgeR foreach ggplot2 ggthemes Hmisc igraph lattice limma PerformanceAnalytics plyr reshape2 Rmisc Rtsne scatterplot3d survival TPEA]; }; - scTenifoldNet = derive2 { name="scTenifoldNet"; version="1.1.0"; sha256="1qfmrrpvrxpj9mmhyhr8f99iiz3y1l8iz2hff3wgl9jx80nnhr67"; depends=[MASS Matrix pbapply reticulate RSpectra rTensor]; }; + scTenifoldNet = derive2 { name="scTenifoldNet"; version="1.2.0"; sha256="1n86fcvx0a34xd2h9d9kmyn991lqh6573rrkicql946pm697g4vz"; depends=[MASS Matrix pbapply reticulate RSpectra]; }; scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; }; scagnostics = derive2 { name="scagnostics"; version="0.2-4.1"; sha256="1azg1xlid63l9mcyns9yyl3a3hykbl0sl0h5jhyvzjzahfyanq53"; depends=[rJava]; }; scaleboot = derive2 { name="scaleboot"; version="1.0-1"; sha256="1q0bs5f1vgja5gj3id1ny6raja8ljgd8dk50fs1wn90f6080afy7"; depends=[mvtnorm pvclust]; }; scales = derive2 { name="scales"; version="1.1.0"; sha256="00rdbfj5mwc3kr8pskidn3n2zkp4ms6cx36xazz54pxw3pysdr0y"; depends=[farver labeling lifecycle munsell R6 RColorBrewer viridisLite]; }; - scalpel = derive2 { name="scalpel"; version="1.0.1"; sha256="18mapg96xl9a1g85h5xhqsz1333hkc28z0ivfjaff933p1kc6sng"; depends=[gam igraph Matrix protoclust R_matlab SDMTools]; }; + scalpel = derive2 { name="scalpel"; version="1.0.2"; sha256="1rwa1h24b0bzsiasjgj84rd5k5wpw6pnp463qaj624sra9wp9pw9"; depends=[gam igraph Matrix protoclust R_matlab]; }; scalreg = derive2 { name="scalreg"; version="1.0.1"; sha256="0kfcgl9cpp6g1qx23s1yrjzn0hi74vmrw567vy9wpsmhk04a5bkx"; depends=[lars]; }; scam = derive2 { name="scam"; version="1.2-5"; sha256="0c8pp2cr3khaibpv3m8kkw73q2pdx6931kh8w64s38wgvjv293fp"; depends=[Matrix mgcv]; }; scan = derive2 { name="scan"; version="0.40"; sha256="1khmg05dzs1va66bm26wxx440nlkl0r70wbh814fdlmij3py7m54"; depends=[car kableExtra knitr MASS mblm nlme readxl]; }; @@ -13196,7 +13221,8 @@ in with self; { scape = derive2 { name="scape"; version="2.3-2"; sha256="1i3k37r7lisrj1pblni5xn76kf6py52s4yd51fm78c3286yfaasf"; depends=[coda Hmisc lattice]; }; scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; }; scatr = derive2 { name="scatr"; version="1.0.1"; sha256="1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d"; depends=[cowplot ggplot2 ggridges ggstance jmvcore R6]; }; - scatterD3 = derive2 { name="scatterD3"; version="0.9"; sha256="0miadn406viqzw1sc27fl3xb1l0vvachrfiv72jl9r7qgk2ga5jv"; depends=[digest ellipse htmlwidgets]; }; + scatterD3 = derive2 { name="scatterD3"; version="0.9.1"; sha256="0nlsy4z9m4kzm5m577nhysc17z9f3hc5anmig992x7mq4vnjnwxh"; depends=[digest ellipse htmlwidgets]; }; + scattermore = derive2 { name="scattermore"; version="0.6"; sha256="0wa7vnw935320333ivr1k5kr1qxbxppy9ncsf2hp2a2gw885scn8"; depends=[ggplot2]; }; scatterpie = derive2 { name="scatterpie"; version="0.1.4"; sha256="0g5sn0iv6c1q7y51j4gbbbnil5089dgk1w4q94c7h5y3x7wfrzqb"; depends=[ggforce ggplot2 rlang rvcheck tidyr]; }; scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-41"; sha256="152xqz9c70qab86mpgng049gxsg5f4fpf1m8dh93fb9v1avjd0sc"; depends=[]; }; scbursts = derive2 { name="scbursts"; version="1.6"; sha256="09yxnq6m35xmp0priavjnh0bdcwkr5hhy7j33cz13xwkrd1cgw5j"; depends=[readxl tibble]; }; @@ -13210,16 +13236,16 @@ in with self; { schoenberg = derive2 { name="schoenberg"; version="2.0.2"; sha256="17pbw9266r9lv9blygmvq9285kcrcy07jaqrj3zfa2pg0zyvhjvm"; depends=[crayon]; }; scholar = derive2 { name="scholar"; version="0.1.7"; sha256="142iwrips1589fa0g1178a6s1cz4dfcv9b0qs570q6b6ccfjxi6r"; depends=[dplyr ggplot2 ggraph httr R_cache rvest stringr tidygraph xml2]; }; schoolmath = derive2 { name="schoolmath"; version="0.4"; sha256="06gcmm294d0bs5whvknrq48sk7li961lzy4bcncjg052zbbpn67x"; depends=[]; }; - schrute = derive2 { name="schrute"; version="0.1.1"; sha256="1mwlxmwc8bnjihz4l30vkzx1lm36x0dfgzx0j64kfdp1xdbbq3ma"; depends=[dplyr ggplot2 magrittr stringi stringr tibble tidyr tidytext]; }; + schrute = derive2 { name="schrute"; version="0.2.0"; sha256="01bv7sqksh06n7rdc18njabnynmjvqfd8hbc2hpbjwpqmpmhz712"; depends=[dplyr ggplot2 magrittr stringi stringr tibble tidyr tidytext]; }; schumaker = derive2 { name="schumaker"; version="1.2"; sha256="1whfmnjmib7lh72src7cnbw3mswzaxq8vd50x5x9cv0031n0y6l7"; depends=[]; }; scico = derive2 { name="scico"; version="1.1.0"; sha256="0c52a4mhsd9y5vhz3h6f7j2fa5cq0lkks5qa449w6kra5cqpbx34"; depends=[]; }; scidb = derive2 { name="scidb"; version="2.0.0"; sha256="079akdsxxjnca5jsv0grw1c2nd3dl368xhy4mzm94mh5j6ghi57l"; depends=[bit64 curl data_table digest openssl]; }; scientoText = derive2 { name="scientoText"; version="0.1"; sha256="0f18hg9s50lbbgl0fqjv45yhynpnsxj8wwm07g126snzr68gbd21"; depends=[stringr tm]; }; scifigure = derive2 { name="scifigure"; version="0.2"; sha256="1zc88r1lnb0cws130hq4rjc34rrp6zkmi8yhkwsm3vkznbhi4iba"; depends=[]; }; - scio = derive2 { name="scio"; version="0.6.1"; sha256="0h15sscv7k3j7qyr70h00n58i5f44k96qg263mxcdjk9mwqr0y65"; depends=[]; }; - sciplot = derive2 { name="sciplot"; version="1.1-1"; sha256="1ydwx9kh778z3x7s3i6gqinqi6bmsf6bslaf0mgszj0nrgcmj6y3"; depends=[]; }; + scio = derive2 { name="scio"; version="0.9.0"; sha256="0xj9iiqjz2k1llq09k2l3g7zn5zw2ayifhqsdm8fc2j9r4m1nrn2"; depends=[glasso QUIC]; }; + sciplot = derive2 { name="sciplot"; version="1.2-0"; sha256="097zcgjsv54f6wd8fjwh2xb406j6yrw94v9pcxa0zln1q7fs93vk"; depends=[]; }; sclero = derive2 { name="sclero"; version="0.2"; sha256="1vqysby822s958msnwcqmz78193vrgmpf6si1jnfb9cj90hh7wgg"; depends=[plyr RImageJROI spatstat]; }; - sclr = derive2 { name="sclr"; version="0.3.0"; sha256="1qm9jds7kxaz1g6v71z2vfmih2sr4c2n26xxjs6ic9hr9dd15y9y"; depends=[broom dplyr rlang tibble]; }; + sclr = derive2 { name="sclr"; version="0.3.1"; sha256="10pihx35889w509ijbyq5hzslk9n7kakjnfscg7p0dq198nbpyca"; depends=[broom dplyr purrr rlang tibble]; }; scmamp = derive2 { name="scmamp"; version="0.2.55"; sha256="17qhj9l1akxachaimy9d5rls8adph8aalj3qr6ckip29a8ma9gf7"; depends=[ggplot2 graph reshape2 Rgraphviz]; }; scoper = derive2 { name="scoper"; version="0.2.0"; sha256="1b4kyrml5yk46fw9hrp21i6w6ylck5qs64y0mzkbqr2wf1x4ncvs"; depends=[alakazam data_table doParallel dplyr foreach ggplot2 Rcpp rlang seqinr shazam stringi stringr]; }; scopr = derive2 { name="scopr"; version="0.3.3"; sha256="1j45l5zcrpc4dnb6ik1v0jlqizpkijl0p656s869jhhvv55r6v2i"; depends=[behavr data_table memoise readr RSQLite stringr]; }; @@ -13231,7 +13257,7 @@ in with self; { scoring = derive2 { name="scoring"; version="0.6"; sha256="114jlpbnm15fdan5lr40adxdzwajy3yhdw6dm4kvkvky6qhcx7q5"; depends=[]; }; scoringRules = derive2 { name="scoringRules"; version="1.0.0"; sha256="1jksv22hy8kazqwy6yjdjl32k7i558vcn7i13wc7fmary7v500km"; depends=[knitr MASS Rcpp RcppArmadillo]; }; scout = derive2 { name="scout"; version="1.0.4"; sha256="0vr497g7g1xhf75cwjbjsns2fvdzy86iibbf5w0g2xylw82s4lh2"; depends=[glasso]; }; - scpm = derive2 { name="scpm"; version="1.0-2"; sha256="0jrr90lcalchfqmq5c8ja7ws88rpri3gjdc5z4jfpazn2vznx26n"; depends=[geoR interp lattice MASS Matrix mvtnorm RandomFields rgl]; }; + scpm = derive2 { name="scpm"; version="2.0.0"; sha256="1ib46m3i50annp90n2ih4qdxabxik4ngg9j0a5hgspsvk1i4hrvp"; depends=[interp lattice MASS Matrix mvtnorm RandomFields rgl]; }; scraEP = derive2 { name="scraEP"; version="1.1"; sha256="0dimvdjlgaymjmd3gf60hxcavpr58bpffrfhlksnrfzbb7an65dd"; depends=[data_table RCurl XML]; }; scrapeR = derive2 { name="scrapeR"; version="0.1.6"; sha256="1rqgqpn9rc43rh356z9gb51pjhdczr9a9mgv0i078nniq156rmlb"; depends=[RCurl XML]; }; scrime = derive2 { name="scrime"; version="1.3.5"; sha256="0y2mh9fsffjf3i15bafpasa17z99c1s75r8g6h4hgcwfgpjx75sx"; depends=[]; }; @@ -13240,8 +13266,8 @@ in with self; { scriptexec = derive2 { name="scriptexec"; version="0.3.1"; sha256="0k10x0npdga1nmchzz9xxv0qijnq2n9pb49z1g06bmva1z8wb4wg"; depends=[]; }; scriptuRs = derive2 { name="scriptuRs"; version="0.1.0"; sha256="1wbvfqcc0raazhdc6pyp93q859ilxfz9rz338p3sb7fjyxvparbl"; depends=[]; }; scrm = derive2 { name="scrm"; version="1.7.3-1"; sha256="090gsa23l9s4x92q4n7ggp491fc8ghgnjw5p7j67gd1i1iwr55n8"; depends=[Rcpp]; }; - scrobbler = derive2 { name="scrobbler"; version="0.2.12"; sha256="0zqz5hpq9kabcz2q0zdmbygwj9xgdvs9mmv5k6h4gdbfjbzl4fiy"; depends=[anytime httr jsonlite]; }; - scrubr = derive2 { name="scrubr"; version="0.1.1"; sha256="0dqsk6vvc79qmjcr1gdksqzbd064nkyqfj2mxg6z7aifqgxs8zzz"; depends=[lazyeval magrittr Matrix qlcMatrix]; }; + scrobbler = derive2 { name="scrobbler"; version="0.2.15"; sha256="079ms94q2h8ciqi9b4w9i1md57x844jz464hk7rr564n9wcfp4gj"; depends=[httr jsonlite]; }; + scrubr = derive2 { name="scrubr"; version="0.3.0"; sha256="0kc8m7b18l4nd84kqf0ibv2mchpm9w1bjwwpyjzg0zkkl7k3grs9"; depends=[crul curl data_table fastmatch hoardr jsonlite lazyeval magrittr Matrix qlcMatrix tibble]; }; scrypt = derive2 { name="scrypt"; version="0.1.3"; sha256="14iblgbp9v2by8fjbrpsd59iknp5babcz7j3yv1yxxzcwyb6wrrm"; depends=[Rcpp]; }; scs = derive2 { name="scs"; version="1.3-2"; sha256="10z5619gbnnygk8pkdx2qji56jlv1q6c1z4581pdkd9sfnhg1yp3"; depends=[]; }; sctransform = derive2 { name="sctransform"; version="0.2.1"; sha256="07v3lzccsrkh1glfxd1q20r8f8gl9ls5az0s1dvxm4vcls0hlhyn"; depends=[future_apply ggplot2 gridExtra MASS Matrix Rcpp RcppEigen reshape2]; }; @@ -13251,46 +13277,46 @@ in with self; { sda = derive2 { name="sda"; version="1.3.7"; sha256="1v0kp6pnjhazr8brz1k9lypchz8k8gdaby8sqpqzjsj8klghlcjp"; depends=[corpcor entropy fdrtool]; }; sdat = derive2 { name="sdat"; version="1.1"; sha256="1mxijw2yfblqjvqqb2xrzhfn9c872i1q9ggw24xicvr2fk4lvjw6"; depends=[]; }; sdcHierarchies = derive2 { name="sdcHierarchies"; version="0.18.2"; sha256="09f9b6padx6jsjhh0d7qa7qs99rar4j9fbmyp9569ywc9ld7z7mm"; depends=[cli data_table jsonlite rlang shiny shinyjs shinythemes shinyTree]; }; - sdcMicro = derive2 { name="sdcMicro"; version="5.5.0"; sha256="0qskj65994kmv1s0rpz1a4dvlji1s4sn3y6lfqsh1zdf6lfdvhpn"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase shiny shinyBS VIM xtable]; }; + sdcMicro = derive2 { name="sdcMicro"; version="5.5.1"; sha256="1jabihj878w9wk7lmbnjh9v14jdb14w6ir10ram2bprlxah0bn07"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase shiny shinyBS VIM xtable]; }; sdcSpatial = derive2 { name="sdcSpatial"; version="0.1.1"; sha256="1szv2nb758k3x5scxml2ns11fi99rlmd11r3fhzy3dgylf0m0xnm"; depends=[raster]; }; - sdcTable = derive2 { name="sdcTable"; version="0.30"; sha256="1sbdnm2na36jx76hcpfks3kr5milid5sn0cpzjky90ldfii2pqf9"; depends=[data_table knitr lpSolveAPI Rcpp Rglpk rlang sdcHierarchies slam stringr]; }; + sdcTable = derive2 { name="sdcTable"; version="0.31"; sha256="064aippj8p4mc1zazvkzcjz59hlfybsz6wz1ppwj6d9638ha1a96"; depends=[data_table knitr lpSolveAPI Rcpp Rglpk rlang sdcHierarchies slam stringr]; }; sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; }; sddpack = derive2 { name="sddpack"; version="0.9"; sha256="1963l8jbfwrqhqcpif73di9i5mb996r4f8smjyil6l7sdir7cg9l"; depends=[]; }; sde = derive2 { name="sde"; version="2.0.15"; sha256="0gxyhq9lafd62y68h7fd746a3jz3jdsm0shgwm2ylmp4a2f5cdmm"; depends=[fda MASS zoo]; }; sdef = derive2 { name="sdef"; version="1.7"; sha256="0x2b8shp02ik0dd11wi3jcrl9h9m963fnkfy47fwwhav9x6jg0jf"; depends=[]; }; - sdm = derive2 { name="sdm"; version="1.0-81"; sha256="1fig0vsz4l7kgrdil9jzln1vaff18xx08i5069j40ra04rzadfdi"; depends=[raster sp]; }; + sdm = derive2 { name="sdm"; version="1.0-82"; sha256="0ipzpn5npdb8jdpmih7n5z07q9wpcaxrmggbxm1hhj57m3sp7xc0"; depends=[raster sp]; }; sdmpredictors = derive2 { name="sdmpredictors"; version="0.2.8"; sha256="18374f2bnhh3nb62xf1h6fbqgpimlnkc2vbx5xkg5gyfylydz0v9"; depends=[R_utils raster rgdal]; }; sdmvspecies = derive2 { name="sdmvspecies"; version="0.3.2"; sha256="19avkag13ij1k65vqhmvcy8j50j8vrgw4mjc49x8i63w3d4z1wxh"; depends=[psych raster]; }; - sdnet = derive2 { name="sdnet"; version="2.4.1"; sha256="0z0wqc4hcmxqbavj9zma9j3dkg978l8dxcbyh9mlsbpfi4d1zph8"; depends=[]; }; sdols = derive2 { name="sdols"; version="2.0.0"; sha256="0rwdfb34g1l58ad02jf7wxidgqlccqvijdsvdxqdq8f5p15cl30m"; depends=[salso]; }; sdprisk = derive2 { name="sdprisk"; version="1.1-6"; sha256="061x78irryc5phd8bv9cs2mfgiajgwmr85ryp1r47anadydb2haa"; depends=[numDeriv PolynomF rootSolve]; }; sdpt3r = derive2 { name="sdpt3r"; version="0.3"; sha256="02qv889mkzcilxzszzqcqgn9z5zmki0093mdriradbl1y8a27bp5"; depends=[Matrix]; }; sdtoolkit = derive2 { name="sdtoolkit"; version="2.33-1"; sha256="0pirgzcn8b87hjb35bmg082qp14idc5pfvm6dikpgkswag23hwh8"; depends=[]; }; - sdwd = derive2 { name="sdwd"; version="1.0.2"; sha256="0l0w4jn2p9b7acp8gmlv4w8n662l397kbrm4glslik0vnmjv151w"; depends=[Matrix]; }; - seaaroundus = derive2 { name="seaaroundus"; version="1.2.0"; sha256="09nyypzylb0y04ssd9ak2cw8wpy6a3nmabg9p7jrc8qz54wl6z4q"; depends=[crul ggplot2 jsonlite maps rgdal scales sp wicket]; }; + sdwd = derive2 { name="sdwd"; version="1.0.3"; sha256="0bwjpwmhg2d78pchcka6bypiypd9x07cpbaz68ww5z1f7lhxzd2m"; depends=[Matrix]; }; seacarb = derive2 { name="seacarb"; version="3.2.12"; sha256="1gb7ma2qpw8vnwfblwhalagar1cjqfd4la61bw652kk28v98y9bs"; depends=[gsw oce]; }; - seagull = derive2 { name="seagull"; version="1.0.3"; sha256="1hvww1x8pyfg7raylh7qgqzhm5jzn3lzjm89af2kzdiaynyw2703"; depends=[Rcpp RcppArmadillo]; }; + seagull = derive2 { name="seagull"; version="1.0.5"; sha256="1d36l383lylks2ry1ifyjh2gp5ih02c5idra8f0wqcfa2d3ga5iq"; depends=[Rcpp RcppArmadillo]; }; sealasso = derive2 { name="sealasso"; version="0.1-2"; sha256="0cjy3fj170p5wa41c2hwscmhqxwkjq22vhg9kbajnq7df2s20jcp"; depends=[lars]; }; searchConsoleR = derive2 { name="searchConsoleR"; version="0.4.0"; sha256="1ffg5359pbwylw265wbahwl3hy1b0qqv4al71v5r8lgfircibn0j"; depends=[googleAuthR stringr]; }; searchable = derive2 { name="searchable"; version="0.3.3.1"; sha256="0xc87i2q42j7dviv9nj4hkgjvpfiprkkjpgzwsy47vp7q8024dv0"; depends=[magrittr stringi]; }; - searcher = derive2 { name="searcher"; version="0.0.4"; sha256="0xxawwa95vfcbq8gg61ylnsg1qg6q1ng9iq4r1a1ai9440p5mvh3"; depends=[]; }; + searcher = derive2 { name="searcher"; version="0.0.5"; sha256="1q12il35pfy34n669jzkjciln1ca8by7l1d8zkzv4297547i1qln"; depends=[]; }; seas = derive2 { name="seas"; version="0.5-2"; sha256="0hn4d5dc01zyycd7l3vj1sx6bq668n7fzffw9ypaa5l20fizs0ay"; depends=[MASS]; }; - season = derive2 { name="season"; version="0.3.8"; sha256="0kw3gvy7rv0rms0zj1rvqlfdn3yxr9r9ldm21zl2xrpx9cy04d2d"; depends=[ggplot2 MASS survival]; }; + season = derive2 { name="season"; version="0.3.10"; sha256="1gkn333k2ga545gkm6k9nky2n22yh1jgm58g7w693rsq3h3m0j5w"; depends=[ggplot2 MASS survival]; }; seasonal = derive2 { name="seasonal"; version="1.7.0"; sha256="1mna8w1haj5h2rhiw7jkhprr6cc9qr0n8x73d10v0l732kx41n31"; depends=[x13binary]; }; seasonalview = derive2 { name="seasonalview"; version="0.3"; sha256="1l705yc7ssldsfckbgnvd95sh3zzhpkmf1rr6ar2s60s3wsyly4n"; depends=[dygraphs htmlwidgets openxlsx seasonal shiny shinydashboard xtable xts zoo]; }; seastests = derive2 { name="seastests"; version="0.14.2"; sha256="04kx4sijnpsarq4iaclxvckgr5y0gmz5a0fmkkqjmfi3hm1kvw3d"; depends=[forecast xts zoo]; }; seawaveQ = derive2 { name="seawaveQ"; version="1.0.0"; sha256="19vm1f0qkmkkbnfy1hkqnfz6x2a7g9902ka76bhpcscynl69iy56"; depends=[lubridate NADA survival]; }; - secr = derive2 { name="secr"; version="4.1.0"; sha256="1ylwiw33siaqs8yd3pbpxx6lpipsf1rj474bs8yqiv5ihpxqfyga"; depends=[abind MASS mgcv nlme raster Rcpp RcppEigen RcppNumerical RcppParallel sp stringr]; }; - secrdesign = derive2 { name="secrdesign"; version="2.5.7"; sha256="064c9vwcn0pn0hd461j60fzzc21k22gqlm5zcsz2qqvv5c64ynic"; depends=[abind openCR secr]; }; + secr = derive2 { name="secr"; version="4.2.0"; sha256="008yiv1dq5i1wnjpfb288v60yn58bn54n06rksvmbhppvpg9p4pd"; depends=[abind MASS mgcv nlme raster Rcpp RcppEigen RcppNumerical RcppParallel sp stringr]; }; + secrdesign = derive2 { name="secrdesign"; version="2.5.10"; sha256="14pi5k3iz8xzm832ms82hgzdg8sh9nfsns3dw7mm81n7p03014dd"; depends=[abind openCR secr]; }; secret = derive2 { name="secret"; version="1.0.0"; sha256="09b28f7ndc167bbanbdydralykq718fixnrgs5xr9d3fbdhz1vdl"; depends=[assertthat curl jsonlite openssl rprojroot]; }; + secrettext = derive2 { name="secrettext"; version="0.1.0"; sha256="129v524yyb464mcij7hvzv05cxliaz5nm7v30g9g9ppskcdqhsx2"; depends=[dplyr magrittr rlang stringr testthat tidyr]; }; secrlinear = derive2 { name="secrlinear"; version="1.1.1"; sha256="0jcvraypkss1gphh4cjb0b4v9460fj4dw80yd057ah11p9942ggs"; depends=[igraph maptools MASS rgdal secr sp]; }; secsse = derive2 { name="secsse"; version="2.0.0"; sha256="0qsbn56vc6y19hmc94bimv1mf86ayxa8rj38qvvsxjfm9czmw2ac"; depends=[ape apTreeshape DDD deSolve doParallel foreach geiger phylobase]; }; secure = derive2 { name="secure"; version="0.5"; sha256="16pv5m7rrcs8hcjj3kylq7smyzf2qk8rkg9m1b421w0ac7lg04x1"; depends=[MASS Rcpp RcppArmadillo]; }; securitytxt = derive2 { name="securitytxt"; version="0.1.1"; sha256="0yrydcc68qcsq5wrdfgwfi347pdd0zc8hp2ikmw3iz31anm3b4yw"; depends=[Rcpp]; }; - see = derive2 { name="see"; version="0.4.0"; sha256="1qnmd43ljrdfwf8ks7a89j7wrhpmibs7r0yyidgchmja4scqyp61"; depends=[bayestestR dplyr effectsize ggplot2 ggridges gridExtra insight magrittr parameters rlang scales]; }; + see = derive2 { name="see"; version="0.4.1"; sha256="0w32jqs9b7bqm27ld21pmlwxsbhwpwwa5bv6w15p1lx56gzi5smi"; depends=[bayestestR dplyr effectsize ggplot2 ggridges insight magrittr parameters rlang]; }; seeclickfixr = derive2 { name="seeclickfixr"; version="1.1.0"; sha256="1agsqq2msrqrssffc6liyjjs6nqm90xy2inlcjbkdac5dhinjc4n"; depends=[jsonlite RCurl]; }; seedCCA = derive2 { name="seedCCA"; version="1.0"; sha256="1grs6ykiyp8p5gh93hgb4niggppbh2wzwl6yx0l1qs9fkcz5zvy7"; depends=[CCA corpcor]; }; seedwater = derive2 { name="seedwater"; version="1.0"; sha256="0qqhjax16lnyriv6q9n89g93bs1zy8xwx9jp0xbilba7djzjh33g"; depends=[rpanel tkrplot]; }; + seer = derive2 { name="seer"; version="1.1.4"; sha256="02vv9vrnp8rj44qpn9yiigg95n7bg5v89pjdmrl5y8y1n8ax86xn"; depends=[dplyr ForeCA forecast forecTheta furrr future magrittr Mcomp purrr randomForest repmis stringr tibble tsfeatures urca]; }; seewave = derive2 { name="seewave"; version="2.1.5"; sha256="1qg8f5gik9pw6f9mcxqmrc9x3003s8vdm6g01pjjpyc9qaqiz2vi"; depends=[tuneR]; }; seg = derive2 { name="seg"; version="0.5-7"; sha256="165hl55vzyf3jqlykqji37p2syzhc8dxdjxd4wwr562qnlymzszx"; depends=[sp splancs]; }; segMGarch = derive2 { name="segMGarch"; version="1.2"; sha256="0chw41h25jka9wa3rf3d8dq2ym47379jflv33q6qxaak8xy1kmd9"; depends=[corpcor doParallel fGarch foreach iterators mvtnorm Rcpp RcppArmadillo]; }; @@ -13306,7 +13332,8 @@ in with self; { sejmRP = derive2 { name="sejmRP"; version="1.3.4"; sha256="1j3sadbp12fip3n96s0hx1sg4kzwx8z01p1c905kv8gffhkz9bh0"; depends=[cluster DBI dplyr factoextra RPostgreSQL rvest stringi tidyr XML xml2]; }; selac = derive2 { name="selac"; version="1.7.0"; sha256="0zj5l3q0apn8z0bxna7z7rraq89dq9qfqfclx9ybazr4saq8zk5w"; depends=[ape data_table deSolve expm MASS Matrix nloptr nnet phangorn RColorBrewer seqinr statmod zoo]; }; selectMeta = derive2 { name="selectMeta"; version="1.0.8"; sha256="0i0wzx5ggd60y26lnn4qk4n8h27ahll9732026ppks1djx14cdy0"; depends=[DEoptim]; }; - selectapref = derive2 { name="selectapref"; version="0.1.1"; sha256="0pn0s8dxbshwmv0qdrf670cjk3inf5w7jgac3fq29gmcx4f3fhl2"; depends=[]; }; + selectSNPs = derive2 { name="selectSNPs"; version="1.0.1"; sha256="1fk8l5cj4mjwrgvd04w6j3lh2k7p54ckd166k685qhdhw0kbz3zs"; depends=[Rcpp]; }; + selectapref = derive2 { name="selectapref"; version="0.1.2"; sha256="0njibljh3hiqdn4wdb031bdg1bh3xpixgczbi5i01gaavybsq4cc"; depends=[]; }; selectiongain = derive2 { name="selectiongain"; version="2.0.591"; sha256="11gd9xdn3jl3mg3c9ykw8bqvcxhihn19iqsy8dl8bacijjv84bva"; depends=[mvtnorm]; }; selectiveInference = derive2 { name="selectiveInference"; version="1.2.5"; sha256="07kzpvdmflca1sriqfzn20f84fx2b9kwwiqm91lqjpx854bsx5kh"; depends=[adaptMCMC glmnet intervals MASS Rcpp survival]; }; selectr = derive2 { name="selectr"; version="0.4-2"; sha256="09y1n3iy297g49xlpl7xrjpwgnm57pskx5991lyfcpizbz8ax22m"; depends=[R6 stringr]; }; @@ -13331,14 +13358,15 @@ in with self; { semsfa = derive2 { name="semsfa"; version="1.1"; sha256="1k6i1m4r9y7j85rlrsgfjm8w15ax4xgf70xyvqwsszmf9950ldxx"; depends=[doParallel foreach gamlss iterators mgcv moments np]; }; semtree = derive2 { name="semtree"; version="0.9.14"; sha256="1gyjrvqvqmm0dcbddjq90v3gsniiz9rl66nxiayvfbkhs4pih39z"; depends=[bitops cluster digest expm ggplot2 MASS matrixcalc matrixStats mvtnorm OpenMx plotrix rpart rpart_plot sets stringr tidyr]; }; semver = derive2 { name="semver"; version="0.2.0"; sha256="10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy"; depends=[assertthat Rcpp]; }; - sen2r = derive2 { name="sen2r"; version="1.2.1"; sha256="19rzh7xxq6b9rbiqmmk4rwh5x0w3h8p8yk7c3111fggm67jy62dv"; depends=[data_table doParallel foreach geojsonio httr jsonlite leaflet leaflet_extras magrittr mapedit raster reticulate sf shiny shinydashboard shinyFiles shinyjs shinyWidgets stars units XML]; }; + semverutils = derive2 { name="semverutils"; version="0.1.0"; sha256="0y3zh8n8bgs3ag8yy9cnp0i0xrn0iqflcbrya70glyb40148w9sw"; depends=[foreach R6]; }; + sen2r = derive2 { name="sen2r"; version="1.3.2"; sha256="07laizh0yl4y1cfvqgv8srrp6xvwxg06lm09493nm1vmlrx08in4"; depends=[data_table doParallel foreach geojsonio httr jsonlite leaflet leaflet_extras mapedit raster sf shiny shinydashboard shinyFiles shinyjs shinyWidgets stars XML]; }; sendmailR = derive2 { name="sendmailR"; version="1.2-1"; sha256="0z7ipywnzgkhfvl4zb2fjwl1xq7b5wib296vn9c9qgbndj6b1zh4"; depends=[base64enc]; }; sendplot = derive2 { name="sendplot"; version="4.0.0"; sha256="0ia2xck94nwirwxi38nv0viz5wb8291yiak6f0wgwh84irsrfp1h"; depends=[rtiff]; }; - sensR = derive2 { name="sensR"; version="1.5-1"; sha256="0hqnk6gvlkl9harz7rh5ikbp0s0vjwi63gxixqjfhkyk02ilaa3z"; depends=[MASS multcomp numDeriv]; }; + sensR = derive2 { name="sensR"; version="1.5-2"; sha256="073za0z6dawba2nd45hs20m0143kckxn3iglkyqz9vdfqwyv7wlq"; depends=[MASS multcomp numDeriv]; }; sensemakr = derive2 { name="sensemakr"; version="0.1.2"; sha256="0p5rh511fymbh8vkfwdv62xxwflkmrqwas1b16m0hlzjwyzdn03m"; depends=[]; }; sensiPhy = derive2 { name="sensiPhy"; version="0.8.4"; sha256="1h225gdnvf3bdw7491h3dcpmdwm8bkqgkqmw9584rmjj8dj24xz1"; depends=[ape caper geiger ggplot2 phylolm phytools]; }; sensibo_sky = derive2 { name="sensibo.sky"; version="1.0.0"; sha256="0s8gbj7qrcbcnflp7v0s93ykh2xgk7jwpyvzndj1f90hjy20x3bc"; depends=[glue httr jsonlite]; }; - sensitivity = derive2 { name="sensitivity"; version="1.17.0"; sha256="149hl1li8gqhlwc99z7q01vgdncyd54bf490pjmdj6gznkk35i02"; depends=[boot ggplot2]; }; + sensitivity = derive2 { name="sensitivity"; version="1.18.0"; sha256="100hrr5yd5fg13gbg7mv5amny3igw8zra8pcl97vwfdxykqqjk5c"; depends=[boot ggplot2]; }; sensitivity2x2xk = derive2 { name="sensitivity2x2xk"; version="1.01"; sha256="1r829k939zzmi0j4chdaniajchcflmmjrl3a9hwnkg0wkfnjbvdl"; depends=[BiasedUrn mvtnorm]; }; sensitivityCalibration = derive2 { name="sensitivityCalibration"; version="0.0.1"; sha256="1fn07dra7dhpsg6f1yn1ayfpmvwaxma8cps94070nrpfwmdvi04g"; depends=[ggplot2 ggrepel plotly relaimpo splitstackshape stringi]; }; sensitivityPStrat = derive2 { name="sensitivityPStrat"; version="1.0-6"; sha256="0rfzvkpz7dll3173gll6np65dyb40zms63fkvaiwn0lk4aryinlh"; depends=[survival]; }; @@ -13347,12 +13375,11 @@ in with self; { sensitivitymv = derive2 { name="sensitivitymv"; version="1.4.3"; sha256="1ga8mf92niiv1z3g3kv5ha5xdd1089aaqp19dz68kv8a396vhy1j"; depends=[]; }; sensitivitymw = derive2 { name="sensitivitymw"; version="1.1"; sha256="1bknnfkkqgmchabcjdfikm37sn5k41ar8lpnjw58i8qh7yzq237i"; depends=[]; }; sensmediation = derive2 { name="sensmediation"; version="0.3.0"; sha256="0pmhlc5aqz1vwl4fpn38nkqy63pbq6q62fk9xjja4khrq35zh9yb"; depends=[maxLik mvtnorm]; }; - sensobol = derive2 { name="sensobol"; version="0.2.1"; sha256="0m6iqr4wylqgg2r3nqylbzblg2sxa3j4b1rakk99l1giqxlql8nc"; depends=[boot data_table ggplot2 magrittr matrixStats randtoolbox Rdpack rlang scales stringr]; }; - sensors4plumes = derive2 { name="sensors4plumes"; version="0.9.3"; sha256="1r9sddnlxpjck7rhm2w7z8jak7wmrxg3d62dydc5dqcqhgp54r6p"; depends=[automap conf_design emdist FNN genalg gstat lattice raster rgdal sp]; }; + sensobol = derive2 { name="sensobol"; version="0.2.2"; sha256="0j5nn5zmz7xfiv2zkik6k12w962p7m60czni9hsfndvvpvwiy2i5"; depends=[boot data_table ggplot2 magrittr matrixStats randtoolbox Rdpack rlang scales stringr]; }; sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; }; senstrat = derive2 { name="senstrat"; version="1.0.3"; sha256="0j6mb55v5ivqvk8nn8fjlzrbdgj6csa58yc6gy1g07m7gk2qz2np"; depends=[BiasedUrn MASS]; }; sentimentr = derive2 { name="sentimentr"; version="2.7.1"; sha256="13myh7w9pynmgvqspsxpnj8mz8jz8nwkwjyax4hahvwb9707hf2s"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; - sentometrics = derive2 { name="sentometrics"; version="0.8.0"; sha256="1aaam2hc25332clicnw00nw5mbflq37myjm0sfr5gn9qjq43qafd"; depends=[caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi]; }; + sentometrics = derive2 { name="sentometrics"; version="0.8.1"; sha256="1kfip67fiplkwcsj35vhkihgnaczx2fj6cvv0mha2pm5c2n5j8l0"; depends=[caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi]; }; separationplot = derive2 { name="separationplot"; version="1.3"; sha256="0ggyr4asp86hvdp4bwdkljz9b2gzdxm2y9nbz2srlgh3m4hlz2cs"; depends=[foreign Hmisc MASS RColorBrewer]; }; seplyr = derive2 { name="seplyr"; version="0.8.5"; sha256="0cccnggnix5w2a31prvnsp2hl6x8k4rm4nchik9aiqwj2x5kz3hq"; depends=[dplyr rlang tidyr wrapr]; }; seqCBS = derive2 { name="seqCBS"; version="1.2.1"; sha256="176ggpdcgmpsjixmz0ldknyd0vw120kjyrid3bq2bn4cgkwzb74z"; depends=[clue]; }; @@ -13361,12 +13388,13 @@ in with self; { seqICP = derive2 { name="seqICP"; version="1.1"; sha256="1dfhl7g47icjw38p9c0hyvnn3pwzw7pndywk22vgcyfhiz23xjcp"; depends=[dHSIC mgcv]; }; seqMeta = derive2 { name="seqMeta"; version="1.6.7"; sha256="11dscdrlnk5jzg0q2g59qis4xjr4xs86bi463jmhq53n9gsb4i1l"; depends=[CompQuadForm coxme Matrix survival]; }; seqRFLP = derive2 { name="seqRFLP"; version="1.0.1"; sha256="1i98hm8wgwr8b6hd237y2i9i0xgn35w4n2rxy4lqc5zq71gkwkvk"; depends=[]; }; - seqgendiff = derive2 { name="seqgendiff"; version="1.1.1"; sha256="0kj36zbrc96zjha57qx2f2n7wq6fay7c8x49n0jpnmjs66daaxlh"; depends=[assertthat cate clue irlba matchingR pdist sva]; }; + seqgendiff = derive2 { name="seqgendiff"; version="1.2.1"; sha256="1xidf5dqd7vbs6vl73q5ja1hfhlqsc3d212c0si2wm8f8fsb1bw3"; depends=[assertthat cate clue irlba matchingR pdist sva]; }; seqinr = derive2 { name="seqinr"; version="3.6-1"; sha256="0j30za6kji6y3v09cvcydiacnp65pv6ig8aw7cydl47l5s9chky4"; depends=[ade4 segmented]; }; seqmagick = derive2 { name="seqmagick"; version="0.1.3"; sha256="0983k7fbcv4ai42cxxi4f854b9mqx68rgyvy0mjhpb6md7ba59jy"; depends=[Biostrings magrittr]; }; - seqminer = derive2 { name="seqminer"; version="7.1"; sha256="1jydcpkw4rwfp983j83kipvsvr10as9pb49zzn3c2v09k1gh3ymy"; depends=[]; }; + seqminer = derive2 { name="seqminer"; version="8.0"; sha256="00jzj8mwb0zaiwlifd41b26mrq9mzigj18nc29dydi0r42hxg16i"; depends=[]; }; seqmon = derive2 { name="seqmon"; version="2.3"; sha256="0lvjb3mx1h5nbbn3kmjwviy9gzsv9k1bs57jdfc09kid7kisaqmn"; depends=[]; }; seqtest = derive2 { name="seqtest"; version="0.1-0"; sha256="1bdfww9szh7h278id5xpfc39mxkcix3yvsdwc68wx3q3x0wxhqhq"; depends=[]; }; + sequence = derive2 { name="sequence"; version="2.0"; sha256="0r5h96gcp18lwgrl2pjlr71xqspkf6qmm1m0xjq5vadalfa7y294"; depends=[]; }; sequences = derive2 { name="sequences"; version="0.5.9"; sha256="17571m525b6a3k4f0m936wfq401181gx1fpb7x4v0fhaldzdmk3a"; depends=[Rcpp]; }; sequenza = derive2 { name="sequenza"; version="3.0.0"; sha256="13l16lacdcf7fn96yj3xqxap0l19ma9ppkxxx5qk9f5abbvdk303"; depends=[copynumber iotools pbapply readr seqminer squash]; }; sequoia = derive2 { name="sequoia"; version="1.3.3"; sha256="0k0vl7rz9jylry80w8lbqyg3ws3bhkg8axpzy0rrd8xw1lxbpf93"; depends=[plyr]; }; @@ -13376,27 +13404,27 @@ in with self; { serieslcb = derive2 { name="serieslcb"; version="0.4.0"; sha256="1ip4k2xzg06hwsni62ai1whs1zzhwlf94507inpfpqz3jmmafrhq"; depends=[gplots shiny]; }; seroincidence = derive2 { name="seroincidence"; version="2.0.0"; sha256="0sam4y7w6prswz0izkm1a9v2k5rv7z22g1ajy15n9xix9aml5ms4"; depends=[]; }; serpstatr = derive2 { name="serpstatr"; version="0.0.1"; sha256="05nl61i1ida6pj6nqx7yvn6wz4ww43ix63pvqa7539r8lr6n3mpf"; depends=[httr]; }; - serrsBayes = derive2 { name="serrsBayes"; version="0.4-0"; sha256="060zs1n5h9ns9dd004f69qmbwbbqla97bhbldm8narhm84f8pf6i"; depends=[Matrix Rcpp RcppEigen truncnorm]; }; + serrsBayes = derive2 { name="serrsBayes"; version="0.4-1"; sha256="0618415n2izdgv85cnmlnpwy0lz7rnimspq8986w5w1ywhw2xpbm"; depends=[Matrix Rcpp RcppEigen truncnorm]; }; servosphereR = derive2 { name="servosphereR"; version="0.1.1"; sha256="0m1fjd3f1s2ss54xmcrm3p0c33hhi2dj0vim790g4y0mw2aicc8l"; depends=[data_table dplyr magrittr purrr rlang]; }; - servr = derive2 { name="servr"; version="0.15"; sha256="199k9aghwk9rf1rm8pjg60xacqww25cza259h5dfj1ixil0m6dxi"; depends=[httpuv jsonlite mime xfun]; }; + servr = derive2 { name="servr"; version="0.16"; sha256="106skz04iq4dkblr17idxsxfcfqic6rcaz8mahydkwjjppnhp5fc"; depends=[httpuv jsonlite mime xfun]; }; sesem = derive2 { name="sesem"; version="1.0.2"; sha256="0b1xzv38wpkhhlq87xrvlh45b8ksbi8bg4ar5hrf8gxa19r9rmi5"; depends=[gplots lavaan mgcv]; }; session = derive2 { name="session"; version="1.0.3"; sha256="04mcy1ac75fd33bg70c47nxqxrmqh665m9r8b1zsz5jij1sbl8q5"; depends=[]; }; sessioninfo = derive2 { name="sessioninfo"; version="1.1.1"; sha256="0j5f3l58fynxx3v0w62vqpii7miabszgljpja36xx9s8hikh8sqn"; depends=[cli withr]; }; - set = derive2 { name="set"; version="1.0"; sha256="0v17pfrrlncb55n1ag8q9qg9q4c9bq535ax0m0m7jdlpaprnwnf5"; depends=[do]; }; - set6 = derive2 { name="set6"; version="0.1.0"; sha256="1vvafhnl3dvl2iw3lnx0lsjb9vwkad017fri63yslikdhgrfjbqa"; depends=[checkmate R6]; }; + set = derive2 { name="set"; version="1.1"; sha256="0b6qzy3mqf2gfc5gjrn1k6k7ymprjzs2i948zsgcqdkgr8acasbm"; depends=[do]; }; + set6 = derive2 { name="set6"; version="0.1.3"; sha256="0l39zf3mkw810pzgd9s3vwqp4bajls86prnfmwfcknna0wfxk8ka"; depends=[checkmate R6]; }; setRNG = derive2 { name="setRNG"; version="2013.9-1"; sha256="02198cikj769yc32v8m2qrv5c01l2fxmx61l77m5ysm0hab3j6hs"; depends=[]; }; sets = derive2 { name="sets"; version="1.0-18"; sha256="16v7650p47khqrbbw0z98llmwmmhswqmhri0n7nrfhdqwmby1lbl"; depends=[]; }; setter = derive2 { name="setter"; version="0.0-1"; sha256="10fwrx8yysp99rrkbnn3rbz79vyzr2h3p7zxxlqapw1k2lllp0r5"; depends=[assertive_base]; }; settings = derive2 { name="settings"; version="0.2.4"; sha256="092sv6nccm6p2d695l9w0zfi2xgymk12c8p8lhl9nb86mxrb3nry"; depends=[]; }; severity = derive2 { name="severity"; version="2.0"; sha256="1mp19y2pn7nl9m8xfljc515kk5dirv0r2kypazpmd956lcivziqq"; depends=[]; }; - sf = derive2 { name="sf"; version="0.8-0"; sha256="05dyq0vcz2f1fl03hk3v1a4nz4s84yyqw4rc9w9cwfq71gvm9qwf"; depends=[classInt DBI magrittr Rcpp units]; }; + sf = derive2 { name="sf"; version="0.8-1"; sha256="17wyv74m1ppc3s5jdv60r74jj23nidxpzl46vjhfclfhnpvm7sx9"; depends=[classInt DBI magrittr Rcpp units]; }; sfa = derive2 { name="sfa"; version="1.0-1"; sha256="1acqxgydf8j5csdkx0yf169x3yaa31r0ccdrqarh6vj1hacm89ad"; depends=[]; }; sfadv = derive2 { name="sfadv"; version="1.0.1"; sha256="1rfpm6km5pckwhqgpvidm6qsj5sjdaqqj5b0sgvpslivfa4c80cr"; depends=[gmm minpack_lm]; }; sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; }; sfdct = derive2 { name="sfdct"; version="0.0.6"; sha256="0ilh89mfwp1yqn44yn80vz1a6g65hryk6w87ngzvak3pd6jxq6aa"; depends=[dplyr RTriangle sf sp tibble]; }; sfheaders = derive2 { name="sfheaders"; version="0.1.0"; sha256="1bbiqym7kvhyq7d39gmqyvivh5pa7q4d75vya2wrg6m930ihmvqw"; depends=[Rcpp]; }; sfinx = derive2 { name="sfinx"; version="1.7.99"; sha256="14v47y00qwvc2s0vzjw19hwn85nzj8lna539c75qq6zkn6kir6va"; depends=[]; }; - sfsmisc = derive2 { name="sfsmisc"; version="1.1-4"; sha256="0zaw617zarmwir8l60riky0z6r1j3mwfnm1f32vqcbljb74akdj4"; depends=[]; }; + sfsmisc = derive2 { name="sfsmisc"; version="1.1-5"; sha256="173qgm2bn84x544fc3x9gc2rv995sbsvji9lnn2drx8drvzyy8lf"; depends=[]; }; sft = derive2 { name="sft"; version="2.2-1"; sha256="0fxz64ba58n6ghfqsgq64n1c7qkvi8c3lsa86732mil9w71yxw33"; depends=[fda SuppDists]; }; sgPLS = derive2 { name="sgPLS"; version="1.7"; sha256="1jk2j1zn5vq82rcjflnk7g6y2q0v5jl14k804dmigqg013gbykql"; depends=[mixOmics mvtnorm]; }; sgRSEA = derive2 { name="sgRSEA"; version="0.1"; sha256="0vyypnq81l36x0j44q2l9wbf3x4krz4fzypi7vyqhaq97mkzaw5j"; depends=[]; }; @@ -13408,14 +13436,14 @@ in with self; { sglg = derive2 { name="sglg"; version="0.1.5"; sha256="0b2lksn887h92y8l1gjmhm2pxzfn6kk0rjvyh9k2b1j4plkvp73b"; depends=[AdequacyModel Formula ggplot2 gridExtra moments robustloggamma ssym survival]; }; sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; }; sgmcmc = derive2 { name="sgmcmc"; version="0.2.5"; sha256="0lq79c7i6bklh8c63wx3k6h9mk8s1abbr0hc41drcm96bbbg0aal"; depends=[reticulate tensorflow]; }; - sgmodel = derive2 { name="sgmodel"; version="0.1.0"; sha256="03s9z7n7w3pys5dp1z5x91bszgv3q1sax5z591dz9rvmn5glp2lj"; depends=[ggplot2 ramify Rtauchen tidyverse]; }; + sgmodel = derive2 { name="sgmodel"; version="0.1.1"; sha256="1i13vp91i8s61ylsyg0iij1sfclwif7v91slr2srl8ddz6lm23nx"; depends=[ggplot2 ramify Rtauchen]; }; sgof = derive2 { name="sgof"; version="2.3.2"; sha256="020kc6h9iw4qhb9pdi7wk8vcy54dp10x0z3nlq3gwwbj1l9izc44"; depends=[poibin]; }; sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; }; sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; }; shades = derive2 { name="shades"; version="1.4.0"; sha256="1zg95sjhrfvbdlfc387g9p0vnb8nb6agdk1mb3wq3kwkm2da0bqj"; depends=[]; }; - shadow = derive2 { name="shadow"; version="0.6.3"; sha256="0xm3d3x02z2lk1n9z5ny7cdybyvxxznwrfn76nk1jx5dshqhrwpr"; depends=[plyr raster rgeos sp]; }; + shadow = derive2 { name="shadow"; version="0.6.4"; sha256="1vgsqaplfaayr6mqkmgl65parjrw0f044gfskbc4frw3c47ygbzl"; depends=[plyr raster rgeos sp]; }; shadowtext = derive2 { name="shadowtext"; version="0.0.7"; sha256="1s1ip8zfr684a3ld7hvf524bhn2j31k6d1wbhh1ni0flsggv2ckf"; depends=[ggplot2 scales]; }; - shallot = derive2 { name="shallot"; version="0.4.7"; sha256="0lvvnia3yngywp7gm68kdwgfmvag4llhzim8nqcbl6iq52lvlj2g"; depends=[commonsMath rscala salso]; }; + shallot = derive2 { name="shallot"; version="0.4.8"; sha256="0bxixzc39mc9y8nxi20bpcwbfw09gppwi0w0062523c0syn0fzgb"; depends=[commonsMath rscala salso]; }; shape = derive2 { name="shape"; version="1.4.4"; sha256="0hadk3mapkhbh8xjkiz52vxdagmmgvm15xwpzb90ikw4giyipjzl"; depends=[]; }; shapeR = derive2 { name="shapeR"; version="0.1-5"; sha256="17fq4gsdvyniq7n4x1xdvb5kk50184i7why3pdf1djjhknym087j"; depends=[gplots jpeg MASS pixmap vegan wavethresh]; }; shapefiles = derive2 { name="shapefiles"; version="0.7"; sha256="08ghndihs45kylbzd9wnxffn8ixvxjhjnjldjyd526ai2sj8xcgf"; depends=[foreign]; }; @@ -13423,16 +13451,17 @@ in with self; { shapper = derive2 { name="shapper"; version="0.1.2"; sha256="0z2ad0hk1gwxbr4kqbk26lzl25hrcifcp92i3am5j6y0ys71dwsx"; depends=[ggplot2 reticulate]; }; shar = derive2 { name="shar"; version="1.1"; sha256="157b1pia21qygb7pqb97v8b3bklnfq40xf8y7wg6p2ixkab0ws6c"; depends=[classInt raster Rcpp spatstat]; }; sharpData = derive2 { name="sharpData"; version="1.2"; sha256="0pvaq8i1vrra3d0wf6yyqkbin0zgsd1kvdzh4bfnyps6pzn5k789"; depends=[KernSmooth quadprog]; }; - sharpeRratio = derive2 { name="sharpeRratio"; version="1.2"; sha256="0jn8i8vvqahraw78cw6w05v03x49m62l7m1iz81c6hwg05ld36jy"; depends=[ghyp Rcpp]; }; + sharpeRratio = derive2 { name="sharpeRratio"; version="1.3"; sha256="1x8vskx0hgdkxwdsfpc82amhj2089g1wj0qsj6nkd0n4k78wv21x"; depends=[ghyp Rcpp]; }; sharpr2 = derive2 { name="sharpr2"; version="1.1.1.0"; sha256="1r7anfr296l5sbhgry6rb15hlca6mpcm24qssdzz9bckavyfvqgi"; depends=[Matrix mvtnorm]; }; + sharpshootR = derive2 { name="sharpshootR"; version="1.6"; sha256="1kzgxg1w5ajirsif6pgdqyal4aidj6y0q29zhikds4pr9x5sqcs4"; depends=[ape aqp circular cluster curl digest e1071 Hmisc igraph lattice plyr RColorBrewer reshape2 scales soilDB sp stringi vegan]; }; sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; }; - shazam = derive2 { name="shazam"; version="0.2.2"; sha256="1qa9jfbiv40x2dnvfkgcmp0vikv8k1migffqqn8v96zyisndvj8k"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress rlang scales SDMTools seqinr stringi tidyr]; }; + shazam = derive2 { name="shazam"; version="0.2.3"; sha256="1c466yl596vra4bg03spkhz7ybsymaz2yg04amqnal06cwnp32hz"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress rlang scales seqinr stringi tidyr]; }; shelltrace = derive2 { name="shelltrace"; version="3.5.1"; sha256="1xgbavaa26185i6q3907ds3bzq4xrw027x1sw5vsybqrxdz04jiz"; depends=[bmp tiff xlsx]; }; shiftR = derive2 { name="shiftR"; version="1.5"; sha256="18y2qzqx8hd6yph1wnsq4ygm16pcdszynh174xsrxrhvx2h9mi4x"; depends=[]; }; - shiny = derive2 { name="shiny"; version="1.4.0"; sha256="0jvcxs0vdxdlbriahxjzzcmg8v8if21k3xvdgk59iskw71ch81qc"; depends=[crayon digest fastmap htmltools httpuv jsonlite later mime promises R6 rlang sourcetools xtable]; }; + shiny = derive2 { name="shiny"; version="1.4.0.2"; sha256="0r70ynic4wi9cxizk2gg097mfjps3a17ngi763cs6rijs21sr9nw"; depends=[crayon digest fastmap htmltools httpuv jsonlite later mime promises R6 rlang sourcetools xtable]; }; shiny_i18n = derive2 { name="shiny.i18n"; version="0.1.0"; sha256="15llwr4yrx6rlk32b92wcq3dn360y5cvy4mh2aqkza9ikcvlhcvv"; depends=[jsonlite yaml]; }; shiny_router = derive2 { name="shiny.router"; version="0.1.1"; sha256="0biwni6bk39qafvsh8w32crlgm4hf8r9kwkmnlc3w5za2x2fja4c"; depends=[magrittr shiny]; }; - shiny_semantic = derive2 { name="shiny.semantic"; version="0.2.1"; sha256="0m0f22qlmf7f2cf33myn72dm48yslqyx4kwzb96i78a3yz6a2awp"; depends=[htmltools htmlwidgets jsonlite magrittr purrr shiny]; }; + shiny_semantic = derive2 { name="shiny.semantic"; version="0.3.0"; sha256="0kcwkl0rjll8b73g43hk2fclwchr6pl71p632b302zz44vbnvg15"; depends=[htmltools htmlwidgets jsonlite magrittr purrr shiny]; }; shinyAce = derive2 { name="shinyAce"; version="0.4.1"; sha256="1m33dfm2kjirvgix7ybv1kbzgjkicdpv411g9c0q3fw6rnyhfxxn"; depends=[jsonlite shiny]; }; shinyBS = derive2 { name="shinyBS"; version="0.61"; sha256="0rhim4mbp4x9vvm7xkmpl7mhb9qd1gr96cr4dv330v863ra2kgji"; depends=[htmltools shiny]; }; shinyDND = derive2 { name="shinyDND"; version="0.1.0"; sha256="0nkvz4hmjzmxlzj4vkjrdy8xlbxapg1amk180irgvwicqldi4jpm"; depends=[htmltools shiny]; }; @@ -13442,17 +13471,19 @@ in with self; { shinyFiles = derive2 { name="shinyFiles"; version="0.7.5"; sha256="1143m941hma9hc77c3xcw26c0ygfhn9ii2sbp9wrydxv4gc7mr8a"; depends=[fs htmltools jsonlite shiny tibble]; }; shinyHeatmaply = derive2 { name="shinyHeatmaply"; version="0.1.0"; sha256="1vl80vp7yslnh0dvcrpysfn5rndjavphy31y15546q7ax7d0fn6v"; depends=[dplyr DT heatmaply htmltools htmlwidgets jsonlite plotly RColorBrewer readxl shiny viridis xtable]; }; shinyKGode = derive2 { name="shinyKGode"; version="1.0.5"; sha256="004zwz4kqfijzvvwkq8v1gi25w1wrdlg8230g93w36gbi6cl2vk1"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; }; + shinyKnobs = derive2 { name="shinyKnobs"; version="0.1.3"; sha256="1rxlvq4vr87krf7d6mpx0y53hyz8q1jnx6nv7mlhc1ck13q6fgac"; depends=[htmltools shiny]; }; shinyLP = derive2 { name="shinyLP"; version="1.1.2"; sha256="1sjcll10ciq6pj9h8c6ybjqp8763wc423hddlalcblxxpajf6avz"; depends=[shiny]; }; shinyML = derive2 { name="shinyML"; version="0.2.0"; sha256="1x7fshfq85cbaydhhqx1lcfybv6qlrc6rmajsbcvvnbnbp1m5ysb"; depends=[data_table dplyr DT dygraphs ggplot2 h2o plotly shiny shinycssloaders shinydashboard shinyWidgets sparklyr tidyr]; }; shinyMatrix = derive2 { name="shinyMatrix"; version="0.3.0"; sha256="0gakbwfrqyxbm946rgxk3xc4qh4i3631hg8q37058ji63bxqzadc"; depends=[jsonlite shiny]; }; shinyMobile = derive2 { name="shinyMobile"; version="0.1.0"; sha256="1jk4dpg78qxpsqnj44ia3z668bhf8mfziiz8v4zp7mmpp7x5447b"; depends=[htmltools jsonlite magrittr shiny]; }; shinyMolBio = derive2 { name="shinyMolBio"; version="0.2"; sha256="09lq5pvis450il1agcq5n9cilnq84rfv08w2dz1d0bbq1qgrgnvg"; depends=[checkmate dplyr plotly purrr RColorBrewer RDML shiny stringr whisker]; }; + shinyNotes = derive2 { name="shinyNotes"; version="0.0.1"; sha256="1l0nw6xac410109jrr88a62a5fhv6h6xaql19bp0h8qxyc2fppjh"; depends=[DBI dbplyr dplyr magrittr RSQLite shiny shinyjs shinyWidgets stringr]; }; shinyRGL = derive2 { name="shinyRGL"; version="0.1.0"; sha256="07llg1yg5vmsp89jk60ly695zvxky6n06ar77mjxzlyc294akwmy"; depends=[rgl shiny]; }; - shinySIR = derive2 { name="shinySIR"; version="0.1.0"; sha256="1khl6p7256cy6iqg8wyracdyz08iysak91r79hf0xhh2gbb8fs49"; depends=[deSolve dplyr ggplot2 shiny tidyr]; }; + shinySIR = derive2 { name="shinySIR"; version="0.1.1"; sha256="0m8ff5535hy5b363l4xkrdsm3m7mnfdb23h2wgqmysdv4af1gm2i"; depends=[deSolve dplyr ggplot2 shiny tidyr]; }; shinyShortcut = derive2 { name="shinyShortcut"; version="0.1.0"; sha256="101wz9s4rk7fbaqgm0r2v3v8za20vdxwq4vhkz8xr7y5pr65sxiq"; depends=[]; }; shinyTime = derive2 { name="shinyTime"; version="1.0.1"; sha256="1d830wf7d5ki7frbr1vgy9d0vllyfcylq7pfkspjkz64b2xfhah3"; depends=[htmltools shiny]; }; shinyTree = derive2 { name="shinyTree"; version="0.2.7"; sha256="0jfx2capckv7hf2yx3fn8i4rcmhi222ah91jnmhg497x8wgz31s3"; depends=[htmlwidgets jsonlite promises shiny stringr]; }; - shinyWidgets = derive2 { name="shinyWidgets"; version="0.5.0"; sha256="111w6f23m16w6zb5bg85brg90gsyw50rad6c4qqm1y5k3ny1gzgb"; depends=[htmltools jsonlite scales shiny]; }; + shinyWidgets = derive2 { name="shinyWidgets"; version="0.5.1"; sha256="1p56qfgj5y0rzyqj889hmbl7k6gwyxc58rzss9y2vav9d3jgsrr8"; depends=[htmltools jsonlite scales shiny]; }; shinyaframe = derive2 { name="shinyaframe"; version="1.0.1"; sha256="1flhgsm4q7p5acb41v73pf8ni92y9dwdppxjb9czlz1sxwf03p1s"; depends=[htmltools htmlwidgets shiny]; }; shinyalert = derive2 { name="shinyalert"; version="1.0"; sha256="0ngmpbzw6fw1gs6sv9m3xv2c9bmrxg0bs6lnvxn8hm8cwr4440xi"; depends=[digest shiny]; }; shinyanimate = derive2 { name="shinyanimate"; version="0.3.0"; sha256="0vshid5mfq006cprjj61d0g7ajyc3plc66x55c5jjmijwbp6pw7a"; depends=[shiny]; }; @@ -13465,25 +13496,26 @@ in with self; { shinyglide = derive2 { name="shinyglide"; version="0.1.2"; sha256="0i98k3gl83kfzp3vs1his05idhwj1n0bw98ik7d62cgn4rqi6ar4"; depends=[htmltools shiny]; }; shinyhelper = derive2 { name="shinyhelper"; version="0.3.2"; sha256="1c4hvf19j3yyh8r12nx85ldkxs89g98q74csnqs5ml5l79a65vgp"; depends=[markdown shiny]; }; shinyhttr = derive2 { name="shinyhttr"; version="1.0.0"; sha256="1l02g0qgvycwpfr6wl7svnms128fhlzbn9p7i4mr7ghgsd5qr58a"; depends=[shinyWidgets]; }; - shinyjqui = derive2 { name="shinyjqui"; version="0.3.2"; sha256="1a73vsq1wc3xf14y64hkgnk5jgxj98b8aj3g0fs7mgayar3an5g0"; depends=[htmltools htmlwidgets jsonlite shiny]; }; + shinyjqui = derive2 { name="shinyjqui"; version="0.3.3"; sha256="0n4ijxmkp8x6dwrsxwvx0zgd8b5129cmn6q6rrav38v1q5k8889x"; depends=[htmltools htmlwidgets jsonlite shiny]; }; shinyjs = derive2 { name="shinyjs"; version="1.1"; sha256="14k8y313ppj23m9rhlk8jc94x6sbn3qrsnx6xrijiyv8m8dii1l9"; depends=[digest htmltools jsonlite shiny]; }; shinyloadtest = derive2 { name="shinyloadtest"; version="1.0.1"; sha256="0k9b57wm2cv78qf9qryqr1s0p7gsncn8axd285f6rrayg4czb40l"; depends=[curl dplyr getPass ggplot2 glue gtable htmltools httpuv jsonlite lubridate magrittr progress R6 readr rlang rmarkdown scales stringr svglite tibble websocket xml2]; }; shinylogs = derive2 { name="shinylogs"; version="0.1.7"; sha256="1b4p0g1vf9wn643rybf382mw6mrrl49qsykh7npa3agcarwznmgr"; depends=[anytime bit64 data_table DBI digest htmltools jsonlite nanotime RSQLite shiny]; }; - shinymanager = derive2 { name="shinymanager"; version="1.0.100"; sha256="1ls5qg4zmqvapxcbkp4jk8r8rqmd223mb9s2hqq022hbyglclhxk"; depends=[billboarder DBI DT htmltools openssl R_utils R6 RSQLite shiny]; }; - shinymaterial = derive2 { name="shinymaterial"; version="1.0.0"; sha256="1mgvxhk2ky3612ci9f1zz8x7z37r176kw1j0b4bs2843gmnxjfga"; depends=[jsonlite shiny]; }; + shinymanager = derive2 { name="shinymanager"; version="1.0.200"; sha256="00dvzcpba4awmdgy8wcn8h7qdc8mdrfaq3kp28h509xn3gax02wn"; depends=[billboarder DBI DT htmltools openssl R_utils R6 RSQLite shiny]; }; + shinymaterial = derive2 { name="shinymaterial"; version="1.0.1"; sha256="1vmbc5g55d3nsz18r2s2z5wgm2yrxygnyarsfhkqf3vyj8vndglw"; depends=[jsonlite shiny]; }; shinypanels = derive2 { name="shinypanels"; version="0.5.0"; sha256="1rslz9wl3gx11dm6il77j4k5swxvcfy5mf0zffbs4zk8xjgpzzj6"; depends=[glue htmltools shiny shinyjs]; }; shinyrecap = derive2 { name="shinyrecap"; version="0.1.0"; sha256="1mic7azxz2in67g3a2ir550w8psh6kc75p6hja6m62a0yy7j2n92"; depends=[CARE1 coda conting dga future ggplot2 ipc LCMCR promises Rcapture reshape shiny shinycssloaders testthat]; }; shinystan = derive2 { name="shinystan"; version="2.5.0"; sha256="18alf5kiqw7y2l6m5nxxizwc2znsf9frxfsqhvgcad8hld9cbya5"; depends=[bayesplot colourpicker DT dygraphs ggplot2 gridExtra gtools markdown reshape2 rsconnect rstan shiny shinyjs shinythemes threejs xtable xts]; }; shinytest = derive2 { name="shinytest"; version="1.3.1"; sha256="1qn46kgqxfbfimghy5d200rmxpmbp7ckl7dm82m4bnrsf9ivzlgg"; depends=[assertthat callr crayon debugme digest htmlwidgets httpuv httr jsonlite parsedate pingr R6 rematch rstudioapi shiny testthat webdriver withr]; }; shinythemes = derive2 { name="shinythemes"; version="1.1.2"; sha256="12miz44n2zxfswnia7p8dirxj3miw0aqn4pkx2111ikz67ax84rf"; depends=[shiny]; }; shinytoastr = derive2 { name="shinytoastr"; version="2.1.1"; sha256="01j2z4gf1wxblrjayykwxdr2s8394i7k930x8g4hmrj7c9pv264n"; depends=[shiny]; }; - shipunov = derive2 { name="shipunov"; version="1.4"; sha256="0a2rd8qr9493gq74rqjaxjn9cxygikhy87jf1yqaxa6b9djwdqzc"; depends=[]; }; + shinyypr = derive2 { name="shinyypr"; version="0.0.1"; sha256="1hqy713ixdsi3b8apxwycmw25lhynsh5gs4ldbj7fsr52jw01apl"; depends=[bsplus chk dplyr DT ggplot2 lifecycle magrittr purrr readr shiny shinyjs waiter ypr]; }; + shipunov = derive2 { name="shipunov"; version="1.7"; sha256="0sq2xk1dsw0jca9lg0j8qypfzxzzw8lfn3ldgcpyn3wmhyg2w1xc"; depends=[]; }; shock = derive2 { name="shock"; version="1.0"; sha256="11m52al591xjznl62q1waxsg5m1a1afmd0yqcc5zsjlrplykg4lp"; depends=[capushe GGMselect glasso igraph mvtnorm]; }; shopifyr = derive2 { name="shopifyr"; version="1.0.0"; sha256="05hih1v5vvr7vmwarizsdx8517g74s96fdsz3klcz3g12idx1nqn"; depends=[curl jsonlite R6]; }; shortcuts = derive2 { name="shortcuts"; version="1.4.0"; sha256="0y77napfz1v3s667cmyn8357xg5lncbw1hc3hm5kra6nalhq1jps"; depends=[rstudioapi]; }; shotGroups = derive2 { name="shotGroups"; version="0.7.5.1"; sha256="0il6hlv2hnfx5rmj3vk3q9p24xqii77z6hdz5fsgyh4i3kgcyrjy"; depends=[boot coin CompQuadForm KernSmooth robustbase]; }; showimage = derive2 { name="showimage"; version="1.0.0"; sha256="1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl"; depends=[png]; }; - showtext = derive2 { name="showtext"; version="0.7"; sha256="1ihgqzfia36b0n9aa41p1w98wxxvs1lxh1zz0570hbfqmph1sk73"; depends=[showtextdb sysfonts]; }; + showtext = derive2 { name="showtext"; version="0.7-1"; sha256="0a5gg72bfrc7wm0phj1aflj1wc08kfi81ac32na6ya9s2ivyimw5"; depends=[showtextdb sysfonts]; }; showtextdb = derive2 { name="showtextdb"; version="2.0"; sha256="1qwwj9x2jvadvwn60h75k99c9xi7yhqjsgaakahz5paxgj583bsh"; depends=[sysfonts]; }; shp2graph = derive2 { name="shp2graph"; version="0-5"; sha256="1l9mg98hkb0bvr5dzd2p26g8mw5hqjxrym2gmbm10kyapvccfk56"; depends=[igraph maptools sp]; }; shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; }; @@ -13495,7 +13527,7 @@ in with self; { sicegar = derive2 { name="sicegar"; version="0.2.3"; sha256="0q0sp3aqvd4jh8ncfnls194iqikyxyk28zsyq65jkqd8z26s2dq4"; depends=[dplyr fBasics ggplot2 minpack_lm]; }; sideChannelAttack = derive2 { name="sideChannelAttack"; version="1.0-6"; sha256="1xcsy1h8gc8a4f9nzs7zv8x6v55g1pg8vy1kg64iqxm0gnz2f20l"; depends=[ade4 corpcor infotheo MASS mmap]; }; sidier = derive2 { name="sidier"; version="4.0.3"; sha256="0pfzx0a5f597iqigq9xidm9b9xv18zaiqa35yp4xlk1y7gv0nj6c"; depends=[ape ggmap ggplot2 gridBase igraph network]; }; - sidrar = derive2 { name="sidrar"; version="0.2.4"; sha256="1zwxafc4xaa4386a9jdg3gwflpdxql3f33bkqx1l2yl30x3517rw"; depends=[dplyr magrittr RCurl rjson rvest stringr tidyr xml2]; }; + sidrar = derive2 { name="sidrar"; version="0.2.5"; sha256="04i061kfzk2qpdz8z7igj0i53387rj3xv6q7xzdyginkn67mrj5m"; depends=[magrittr RCurl rjson rvest stringr xml2]; }; siebanxicor = derive2 { name="siebanxicor"; version="1.0.0"; sha256="0bnpqqhqvqq9kxvzljzp4d5aw9drh78cwyxyqzdvshijl7mmqjwc"; depends=[httr jsonlite]; }; sievePH = derive2 { name="sievePH"; version="1.0.1"; sha256="1hdccfq39sw3jsakv8lrnjp8mmc431l6ka1g9r53ihrz18s6c39v"; depends=[survival]; }; sievetest = derive2 { name="sievetest"; version="1.2.3"; sha256="17qrm7axvlr2yzp8brbibp26f8qdpqm85hc2kjzxm5zqwfvd6dfs"; depends=[]; }; @@ -13510,13 +13542,14 @@ in with self; { signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; }; signalHsmm = derive2 { name="signalHsmm"; version="1.5"; sha256="1d4v6cbvcbi8pb5zmn58s01h3jb0kv7yr7qvcnx4p2v82knvhik7"; depends=[Rcpp seqinr shiny]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; - signnet = derive2 { name="signnet"; version="0.5.0"; sha256="0m3bb1m1zqvfn1ym4nfp9364bfgryz2clqi7ls5bnwpkn2vznyqq"; depends=[igraph Matrix Rcpp RcppArmadillo]; }; + signnet = derive2 { name="signnet"; version="0.5.2"; sha256="0lhxp87m7c898xvdhzca6lm625cnh3rvbqbbz42f1lv388ik4sw2"; depends=[igraph Matrix Rcpp RcppArmadillo]; }; signs = derive2 { name="signs"; version="0.1.2"; sha256="0dzf5pydvs93rvj6idw9l2asv1bxwz20df7qis2db84hfww2kc6m"; depends=[rlang scales]; }; sigora = derive2 { name="sigora"; version="3.0.5"; sha256="1240q42kpb4l1idanywzal7c85kp3ncdl5m2irh8qs5xrs02gdc7"; depends=[]; }; sigr = derive2 { name="sigr"; version="1.0.6"; sha256="01crx8r9bcq1kwlq66vypnv1r48fp3hbl06ykd8g2k5zm06w0yyi"; depends=[wrapr]; }; siland = derive2 { name="siland"; version="1.4.6"; sha256="0alnyd3phjv9kg21px96daw21613wjgp1ypqh8b4h0djcjd9xn17"; depends=[fasterize ggforce ggplot2 lme4 raster reshape2 sf sp]; }; silicate = derive2 { name="silicate"; version="0.2.0"; sha256="19386cd46jil4fhs6340wbk96igi9jlfgghbm88c0j5ff4ah1bsj"; depends=[decido dplyr geometry gibble gridBase magrittr purrr rlang tibble tidyr unjoin]; }; sim1000G = derive2 { name="sim1000G"; version="1.40"; sha256="1avq6xfc34izavvp9vb5ccc2b9nc4m7cwr06ygnsmpgwi5nswbb8"; depends=[hapsim MASS readr stringr]; }; + sim2Dpredictr = derive2 { name="sim2Dpredictr"; version="0.1.0"; sha256="0q1l75h1dcxnd60lcmf4sny1ywidfmm0yv9ylkb3yc13v469167i"; depends=[car dplyr ggplot2 magrittr MASS matrixcalc Rdpack spam tibble tidyverse]; }; simEd = derive2 { name="simEd"; version="1.0.3"; sha256="1yq0qblrz0zddx682rzwdaa0k0r223i123la7wbp73spnn38g4br"; depends=[rstream]; }; simExam = derive2 { name="simExam"; version="1.0.0"; sha256="10p3y67cli5is2gj23cjy8y7zpbnn2jbxmfiq01ls0hc1jind82w"; depends=[Matrix msm]; }; simFrame = derive2 { name="simFrame"; version="0.5.3"; sha256="154d4k6x074ib813dp42l5l8v81x9bq2c8q0p5mwm63pj0rgf5f3"; depends=[lattice Rcpp]; }; @@ -13528,11 +13561,10 @@ in with self; { simPH = derive2 { name="simPH"; version="1.3.10"; sha256="0br32m28ynmhr4xal69bsv925rlmih898rk5bskn1s6bhsshalqq"; depends=[data_table dplyr ggplot2 gridExtra lazyeval MASS mgcv quadprog stringr survival]; }; simPop = derive2 { name="simPop"; version="1.2.0"; sha256="05f1azdz202bap4pkqxiacj7wqkbmw3naw6p7xgmvx8nlh5xl40h"; depends=[colorspace data_table doParallel e1071 EnvStats fitdistrplus foreach laeken lattice MASS nnet party plyr ranger Rcpp RcppArmadillo vcd VIM wrswoR]; }; simSummary = derive2 { name="simSummary"; version="0.1.0"; sha256="1ay2aq6ajf1rf6d0ag3qghxpwj0f8b3fhpr2k0imzmpbyag1i3gj"; depends=[abind gdata svUnit]; }; - simTargetCov = derive2 { name="simTargetCov"; version="1.0"; sha256="0r34jkrkq382a7afy4nqrw1ci9yh8aq3mfixw11asxjb7m16c1j2"; depends=[MASS]; }; - simTool = derive2 { name="simTool"; version="1.1.4"; sha256="1jb5r32kwyfv38vij236f3mb2ijqm48iz427zya27dyhps8i305s"; depends=[dplyr plyr purrr reshape tibble tidyr]; }; + simTargetCov = derive2 { name="simTargetCov"; version="1.0.1"; sha256="0gdqqwg9i2hga6l4s5x7wbbsm20b3sgwrci1g6hc04x1h9aawiw2"; depends=[MASS]; }; + simTool = derive2 { name="simTool"; version="1.1.5"; sha256="09pvrcjqkgrrvr1qdkc9s1s880x5zmmcfj7wrl22lanpfkng5x6f"; depends=[dplyr purrr tibble tidyr]; }; simba = derive2 { name="simba"; version="0.3-5"; sha256="14kqxqavacckl5s1518iiwzrmlgbxz1lxy33y8c9qq7xaln41g9h"; depends=[vegan]; }; simboot = derive2 { name="simboot"; version="0.2-6"; sha256="0bgibrqb9j62p1chldi1lvdsgc6sgsr7afyq4lvyrc2h861f3j9d"; depends=[boot mvtnorm]; }; - simcausal = derive2 { name="simcausal"; version="0.5.5"; sha256="0k1dbg10bmpxc37nq9vk849qsdi09whc8r85rj08pbcfaac8cgfv"; depends=[assertthat data_table igraph Matrix R6 stringr]; }; simcdm = derive2 { name="simcdm"; version="0.1.1"; sha256="1qzxxpz3nvqf9801k6zgphv6vd8alf2sf6cvzggk7cz6x5jc3w1r"; depends=[Rcpp RcppArmadillo]; }; simctest = derive2 { name="simctest"; version="2.6"; sha256="0igwn82zfx6ajv42gpyx6969aldygldkpdc9ik6601511sscvf2a"; depends=[]; }; simdistr = derive2 { name="simdistr"; version="1.0.1"; sha256="16fsj42zr627i57q1q72l1nhin7g6rxq9hfy487hf1ywd6rvns18"; depends=[]; }; @@ -13540,7 +13572,7 @@ in with self; { simest = derive2 { name="simest"; version="0.4"; sha256="1wp08dkbshn5parq69d7iizp4g16qzpdim37kcg09pgsc3aghwaj"; depends=[cobs nnls]; }; simex = derive2 { name="simex"; version="1.8"; sha256="1849wayygyqv0fh1i2qva7ggh2yah2nn0sgbcy9pldxrjq8q9iw0"; depends=[]; }; simexaft = derive2 { name="simexaft"; version="1.0.7.1"; sha256="0n3n2g07pnpcqhbrjf78lbvqvc136g7jxlx6q27vnk96kwizh3f1"; depends=[mvtnorm survival]; }; - simfinR = derive2 { name="simfinR"; version="0.1.0"; sha256="0g86mci5fjdxj46i1lff51fdzbwzwr3f4vsq74s4mlwl6g093bqy"; depends=[dplyr jsonlite lubridate magrittr memoise purrr]; }; + simfinR = derive2 { name="simfinR"; version="0.2.1"; sha256="1png4cz92vnql2j2b5dlji8b6662ildj05lj1y1bw8xawv9i1i9b"; depends=[crayon dplyr jsonlite lubridate magrittr memoise purrr]; }; simglm = derive2 { name="simglm"; version="0.7.4"; sha256="0lgzbcfqqw94jib6vxl2cv8xcnjjikvdy8qlhq874g0h8spg0l5i"; depends=[broom dplyr future_apply Matrix purrr rlang]; }; simmer = derive2 { name="simmer"; version="4.4.0"; sha256="0kq13ly33hgnwcd53mm372cqcd8glpgdb1jn4q22gd6pbk6j7cjg"; depends=[BH codetools magrittr Rcpp]; }; simmer_bricks = derive2 { name="simmer.bricks"; version="0.2.1"; sha256="1s73mfmpjz91n932kjk50aai5j3p1sjibq73yxrjdhlyhiy4d8lp"; depends=[simmer]; }; @@ -13550,18 +13582,20 @@ in with self; { simode = derive2 { name="simode"; version="1.1.8"; sha256="19l4xwbc7n53sgjbirpssppz5ps6alghxia4asv239fm2251r2jx"; depends=[deSolve pracma quadprog]; }; simone = derive2 { name="simone"; version="1.0-4"; sha256="09d8kdg2wxpmjgcn4dk6yqr6nmf7mzqqi6x1rz3fv7qknja6l1xi"; depends=[blockmodels]; }; simpleCache = derive2 { name="simpleCache"; version="0.4.1"; sha256="1prhahphyb4dg9qv813ahpwfngmr9blirb97pvypc5npzvahj5lv"; depends=[]; }; - simpleNeural = derive2 { name="simpleNeural"; version="0.1.1"; sha256="0rm6kvz1mppvgcvwsgg3nz6ci37l95ins64g0jh4rw6lfmy0grjc"; depends=[]; }; + simpleNeural = derive2 { name="simpleNeural"; version="0.1.3"; sha256="01q04807qws870x1qhvlr3bp0dawy8q4bh00psakhln9j9dl1ljm"; depends=[]; }; simplePHENOTYPES = derive2 { name="simplePHENOTYPES"; version="1.0.5"; sha256="02cr7yk379yilf53rv9s36g2gg1z5cq2qigy7lq31wcpb7vhjig3"; depends=[data_table gdsfmt lqmm mvtnorm SNPRelate]; }; simpleRCache = derive2 { name="simpleRCache"; version="0.3.2"; sha256="0ldmxa5rw1kcb24swnk8s471ww11jfbscynaahnnsi0zzqmhwirk"; depends=[digest]; }; simpleSetup = derive2 { name="simpleSetup"; version="0.1.0"; sha256="0rbzmixk76b3lgi9m7ijhcl6dha7wbbxfgwdhnp2y338zny6c6rm"; depends=[]; }; simpleboot = derive2 { name="simpleboot"; version="1.1-7"; sha256="0769dmrk8rw5v9598p7xlpawybwsdxnrqkxhavqpzy1vwg885575"; depends=[boot]; }; + simplecolors = derive2 { name="simplecolors"; version="0.1.0"; sha256="08xsha7v9k55fqi9f49j2sh2yz8dm5g99rqcjfd1yrlw2mkcrq6a"; depends=[colorspace dplyr forcats ggplot2 magrittr stringr]; }; simplegraph = derive2 { name="simplegraph"; version="1.0.0"; sha256="1gcpbljp1fgaprxnmq23izf1h2x3p5dnxlylwqsnlcj50bvm46gq"; depends=[]; }; + simplexdesign = derive2 { name="simplexdesign"; version="0.1.0"; sha256="139c1c2vpn2rf0q7ldciii3x18f5r62x0l7i6hdk25qwr9sp08k8"; depends=[DiceDesign GGally ggplot2 progress Rfast]; }; simplexreg = derive2 { name="simplexreg"; version="1.3"; sha256="1zkh00xbddhgz0qn0a5pj12n0hpx4f5kihpfj71x92pmxpzglcxh"; depends=[Formula plotrix]; }; - simputation = derive2 { name="simputation"; version="0.2.3"; sha256="1s34b3bm21z2b024cvjy013lzwppp48jn9isq1786d3176r1jk5p"; depends=[gower MASS rpart]; }; + simputation = derive2 { name="simputation"; version="0.2.4"; sha256="16adh97hfszvf934lf8mvwxvx71s7gwhzzhsbqz24zqik20pd6fq"; depends=[gower MASS rpart]; }; simr = derive2 { name="simr"; version="1.0.5"; sha256="1j5w93iliykfnpxl9kzh1rp6d3iy26ksj3j7yjl348yvplh0iyjl"; depends=[binom car iterators lme4 pbkrtest plotrix plyr RLRsim stringr]; }; simrel = derive2 { name="simrel"; version="2.0"; sha256="1wshbnmq9yqh01f9mjvfhhr3d76dshkxmqchxk11v4yx4apd8b4z"; depends=[FrF2 ggplot2 gridExtra jsonlite magrittr miniUI purrr reshape2 rlang rstudioapi scales sfsmisc shiny testthat tibble tidyr]; }; simsalapar = derive2 { name="simsalapar"; version="1.0-10"; sha256="1q7kh44xl7q48vpqbyrp85my6x97l4fqq36bry8vg3k5riihirzf"; depends=[colorspace gridBase sfsmisc]; }; - simsem = derive2 { name="simsem"; version="0.5-14"; sha256="1sg1zmngpviqpbsy8kxnw4f4x93gy3gh02ykmcw8j9falfnd7g6i"; depends=[lavaan]; }; + simsem = derive2 { name="simsem"; version="0.5-15"; sha256="183l6pysssxyhgw3s5gd0319snmvh439cy4xwfdjdwpavb8rrj06"; depends=[lavaan]; }; simsl = derive2 { name="simsl"; version="0.1.0"; sha256="09d6k61c2m0n03xpqvig7310bpgddxl8vzfjgn6wbr21s73b9xis"; depends=[mgcv]; }; simstandard = derive2 { name="simstandard"; version="0.3.0"; sha256="0fg5y6n5ydn6qxbd5sdbxh3aqj4i7qk7h9c28i3s5z4s9rxgycdj"; depends=[lavaan magrittr mvtnorm purrr rlang tibble]; }; simstudy = derive2 { name="simstudy"; version="0.1.15"; sha256="14jynqvxfp8lc7vxa3lc5cfwmvxkg9ssrh78nq0x80rj7lwx8916"; depends=[data_table mvnfast mvtnorm Rcpp]; }; @@ -13577,58 +13611,56 @@ in with self; { sinib = derive2 { name="sinib"; version="1.0.0"; sha256="08x2a5hn41vcsai3r36w1kgzka4ks53pkp6dxn90bsqh40ydb0db"; depends=[]; }; siplab = derive2 { name="siplab"; version="1.4"; sha256="1kayskawq9dqwwmk17akl68xw9kwllkmh4i251gdqkfcz61j3bb4"; depends=[spatstat]; }; sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; }; - sirt = derive2 { name="sirt"; version="3.7-40"; sha256="18adv3gnk1cg9i3jrv6mxfdn68gpdak8451jpwkagz7n9hr0x6dj"; depends=[CDM pbv Rcpp RcppArmadillo TAM]; }; + sirt = derive2 { name="sirt"; version="3.9-4"; sha256="1myj1dpmqzcyxhkyyvva3xwy1aq5d6l37zg9vhfnc3q4h1psc5hm"; depends=[CDM pbv Rcpp RcppArmadillo TAM]; }; sirus = derive2 { name="sirus"; version="0.2.1"; sha256="04ln1i017qb94gz22in9w36b808a0gxbdildwyfzchf2c92wp5cp"; depends=[ggplot2 glmnet Matrix Rcpp ROCR]; }; sisVIVE = derive2 { name="sisVIVE"; version="1.4"; sha256="1vh53irxgk8ahw52cdqbbm89dvmzyf54izg4lm8a3v92k5p6nzwz"; depends=[lars]; }; - sisal = derive2 { name="sisal"; version="0.46"; sha256="00szc3l69i0cksxmd0lyrs4p6plf05sl4vxs3nl4gkbja5y4lvpc"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; - sismonr = derive2 { name="sismonr"; version="2.0.0"; sha256="1irsnsmph8hpmglx7y7293z38yfa9vzq1823pcp393iiyip1n8d0"; depends=[dplyr ggplot2 ggpubr igraph jsonlite magrittr rlang scales stringr tictoc tidyr truncnorm XR XRJulia]; }; - sitar = derive2 { name="sitar"; version="1.1.1"; sha256="1klnfp54sq0jgsyaha6k4i5fv313icjmri5khfsdg1q1zzqxw1f8"; depends=[dplyr glue nlme purrr quantreg rlang rsample tibble tidyr]; }; + sisal = derive2 { name="sisal"; version="0.48"; sha256="1fh35ndra58dryw222ng7ys3gx1izyk5789k30lyd4n8wqy6sjjd"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; + sismonr = derive2 { name="sismonr"; version="2.1.0"; sha256="1v4vfz6zc4f70fay8r9vaxj62pcp8gqnh4aczbqpym9874330vi9"; depends=[dplyr ggplot2 ggpubr igraph jsonlite magrittr rlang scales stringr tictoc tidyr truncnorm XR XRJulia]; }; + sitar = derive2 { name="sitar"; version="1.1.2"; sha256="0njnsamb9mrds3rjlwwv6sn980jl744mdp0b9d36sqws7wgnxrfq"; depends=[dplyr glue nlme purrr rlang rsample tibble tidyr]; }; sitmo = derive2 { name="sitmo"; version="2.0.1"; sha256="0apdhwy3kxs39agsbvx5vn3xsgb22bf3jrwmr2cmqk9kmxbx740c"; depends=[Rcpp]; }; sitools = derive2 { name="sitools"; version="1.4"; sha256="0c0qnvsv06g6v7hxad96fkp9j641v8472mbphvaxa60k3xc7ackb"; depends=[]; }; sitree = derive2 { name="sitree"; version="0.1-7"; sha256="08yamivn2vxgrizh5gvvr9cn3cn1657r0p2nrkwbqljqrhmzi7qd"; depends=[data_table lattice latticeExtra]; }; sitreeE = derive2 { name="sitreeE"; version="0.0-5"; sha256="16m8w0rxb40pimzd06znqskz74jk4rrki4gjy8nk24r1zih2cjq1"; depends=[data_table sitree]; }; sizeMat = derive2 { name="sizeMat"; version="1.1.0"; sha256="1pxb99gd0zfrpbq2ndmhciv2bc8xdfgm0q1y771f6ji5665qxgfw"; depends=[MASS matrixStats MCMCpack]; }; - sjPlot = derive2 { name="sjPlot"; version="2.8.2"; sha256="16721a5006q0gv45zjcwnkykxhjkzpq5n35vhik0g0ixgm3a2vci"; depends=[bayestestR dplyr effectsize forcats ggeffects ggplot2 insight knitr MASS parameters performance purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; + sjPlot = derive2 { name="sjPlot"; version="2.8.3"; sha256="0ip1rkjlhyf3axlc8qqss1qq1f0xrda890c1jmcbhm98wwjw264f"; depends=[bayestestR dplyr effectsize ggeffects ggplot2 insight knitr MASS parameters performance purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; }; - sjlabelled = derive2 { name="sjlabelled"; version="1.1.2"; sha256="1vnx067mxnvz4jzhmpiarda8ln6habzj02qikvkix5piiy85sqcw"; depends=[haven insight]; }; + sjlabelled = derive2 { name="sjlabelled"; version="1.1.3"; sha256="1amq7i9sxf0pkxhskqc53xq5wvc9rdxm7cxyb4b6xh6qsskjnlsj"; depends=[haven insight]; }; sjmisc = derive2 { name="sjmisc"; version="2.8.3"; sha256="0w8l9grmp4q775jrf4q6rxx36ld5daz9b0gdxyyh42xfihk6m62h"; depends=[dplyr insight magrittr purrr rlang sjlabelled tidyselect]; }; - sjstats = derive2 { name="sjstats"; version="0.17.8"; sha256="0gagqbcmimlvxhpjkmd3s17mbrz5n937qksca1hvm6kj4rk37hzb"; depends=[bayestestR broom dplyr effectsize emmeans insight lme4 magrittr MASS modelr parameters performance purrr rlang sjlabelled sjmisc tidyr]; }; + sjstats = derive2 { name="sjstats"; version="0.17.9"; sha256="0938ac6ixvkif07azd2msa8g3qnn9rabj6jg17almbysl83kg4nm"; depends=[bayestestR broom dplyr effectsize emmeans insight lme4 magrittr MASS modelr parameters performance purrr rlang sjlabelled sjmisc tidyr]; }; skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; }; skedastic = derive2 { name="skedastic"; version="0.1.0"; sha256="19jfsir1z7lv7h3085by9b638jzqgc9753aya21x3rvzq7hb3pr3"; depends=[broom car gmp het_test lmtest lubridate magrittr matrixcalc pracma Rdpack Rmpfr tibble tseries]; }; - skeleSim = derive2 { name="skeleSim"; version="0.9.8"; sha256="1wxdl30cy8vr1cd0wcjxyklp6crw4bv8r77ma2dkzmxm2ma5jw92"; depends=[adegenet ape hierfstat igraph markdown pegas reshape2 rmetasim shiny shinyFiles strataG swfscMisc]; }; skeletor = derive2 { name="skeletor"; version="1.0.4"; sha256="1jfbfbkjx8mdwamsrkhvcnyn470in702vgcyw3g2dbgs84gl29q8"; depends=[]; }; skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; }; + skewlmm = derive2 { name="skewlmm"; version="0.1.0"; sha256="158nxycjg8bmx653nc57gdw02hf5szqbl2hgcb10yrmpssk15qbs"; depends=[dplyr ggplot2 moments mvtnorm nlme numDeriv purrr]; }; skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; }; - skimr = derive2 { name="skimr"; version="2.0.2"; sha256="1310fgmg1mzgy1xw6rbnr0v5habzi0v18383cpwkgir38ild9llk"; depends=[cli crayon dplyr knitr magrittr purrr repr rlang stringr tibble tidyr tidyselect]; }; - sklarsomega = derive2 { name="sklarsomega"; version="2.0"; sha256="05ar391bsaixv83dah3qzfi50avsjhn85niyq5n05sb8d5943z9h"; depends=[extraDistr hash LaplacesDemon Matrix mcmcse numDeriv spam]; }; + skimr = derive2 { name="skimr"; version="2.1"; sha256="18c86bzw8y08yg7gz4c5drxb33jd31iywbwzna2y246qijlsyvi5"; depends=[cli crayon dplyr knitr magrittr purrr repr rlang stringr tibble tidyr tidyselect withr]; }; skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; }; skmeans = derive2 { name="skmeans"; version="0.2-11"; sha256="1a8nwlym6pf0z13nnw1id2wls9lq788860yhjaqd56c3slzfsymn"; depends=[clue cluster slam]; }; - skpr = derive2 { name="skpr"; version="0.62.0"; sha256="07i6k3dzhwy7yblja3dpds0mihnzy9m9hip00p9n5plw65hywi2n"; depends=[car doParallel doRNG foreach future iterators kableExtra knitr lazyeval lme4 lmerTest magrittr nlme promises Rcpp RcppEigen rintrojs shiny shinyjs shinythemes survival viridis]; }; + skpr = derive2 { name="skpr"; version="0.64.2"; sha256="07fchgv0aqgw0hvcav08zzfzqg8nbw8ibbpd3bd11jx1fikx4vyr"; depends=[base64enc car crayon doParallel doRNG foreach future iterators kableExtra knitr lazyeval lme4 lmerTest magrittr nlme promises Rcpp RcppEigen rintrojs shiny shinyjs shinythemes survival viridis]; }; skynet = derive2 { name="skynet"; version="1.3.0"; sha256="02kkgrqcrg1x61fip47w6vzi8nya12rxg47qjhn4lw4czaympqpx"; depends=[data_table dplyr ggplot2 ggrepel httr igraph maps stringr]; }; - skyscapeR = derive2 { name="skyscapeR"; version="0.2.2"; sha256="08h3vvn9zglw3xrl0xpyj95r1n3v6lk835a4nbanxdvi21mgpi77"; depends=[astrolibR doParallel foreach MESS numDeriv oce plotrix png pracma RColorBrewer rootSolve]; }; slackr = derive2 { name="slackr"; version="1.4.2"; sha256="1vm2h5fzcss3xx1annx68wrvv6c0s6h2ci0bipxmdl9amdaqw85w"; depends=[dplyr ggplot2 httr jsonlite]; }; slam = derive2 { name="slam"; version="0.1-47"; sha256="12fggw2c7hz3bpvsaqm24g3r6lbpq6jgli24g7x5j859iak5cqv9"; depends=[]; }; sld = derive2 { name="sld"; version="0.3.2"; sha256="0za5pw7ki419ni9pqqzddb10d16nvv5rh5jrkl4f77j0ps2ajylp"; depends=[lmom]; }; sleekts = derive2 { name="sleekts"; version="1.0.2"; sha256="0syk244xrsv8hz5sxm7wizk0kyn1nc6z4c63c8xn57fz130zj75k"; depends=[]; }; sleepr = derive2 { name="sleepr"; version="0.3.0"; sha256="1ka4pl6a09d1qga5svcirc5ywmzz9pcml09053745lz3p1v8fnn3"; depends=[behavr data_table]; }; - sleepwalk = derive2 { name="sleepwalk"; version="0.2.1"; sha256="0ddjkqfh9jlafmbif1yr5gfnv1g8fq459rkmxf0v6p8w01a3d867"; depends=[cowplot ggplot2 httpuv jrc jsonlite scales]; }; - slfm = derive2 { name="slfm"; version="1.0.0"; sha256="1q4hm1lp498fqcnwr59agg08l1rh5gd8jqrjgkk4mh89zp3x5vaw"; depends=[coda lattice Rcpp RcppArmadillo]; }; + sleepwalk = derive2 { name="sleepwalk"; version="0.3.0"; sha256="00w5c7a1nzy6v0irpskkqyldknq9vdq97r9im1h042zm6lnxxrr6"; depends=[cowplot ggplot2 httpuv jrc jsonlite scales]; }; + slfm = derive2 { name="slfm"; version="1.0.1"; sha256="0s7fdvr4fvsb4789f9ly2x820g4xvabl04wk7k6i8pd5ckj2xjhy"; depends=[coda lattice Rcpp RcppArmadillo]; }; slga = derive2 { name="slga"; version="1.1.0"; sha256="09jrwwms9x9pqbpf9g2gm09nla31m5n1x23czhghj6ih0vp7804r"; depends=[httr raster sf xml2]; }; - slickR = derive2 { name="slickR"; version="0.4.4"; sha256="0b2d68kmjcrjv0ivp73abrfnvlfg178zx0xdbqb0ilb35ja92ai7"; depends=[base64enc htmltools htmlwidgets lifecycle magick xml2]; }; + slickR = derive2 { name="slickR"; version="0.4.9"; sha256="1smlzl0gq01vhv4qqwgikzdwg0z9k5mjf956sf64ps8py1b8d5ry"; depends=[base64enc htmltools htmlwidgets lifecycle xml2]; }; + slider = derive2 { name="slider"; version="0.1.2"; sha256="0h3hvqhdgpsp2n03dmrvqf5zpmpd1f16rscnsmbhpjhn1s09c2zq"; depends=[glue rlang vctrs warp]; }; slideview = derive2 { name="slideview"; version="0.1.0"; sha256="0zq5s6qdxn6ri88pp0wf2kg2k4byrrsfvwh0ai892p4szqbc3w4v"; depends=[htmltools htmlwidgets lattice raster viridisLite]; }; slim = derive2 { name="slim"; version="0.1.1"; sha256="0x9bk6w6lmw15s85gw9g8d1wlb57kkvnmx1wsyasn93x9llkjva1"; depends=[data_table MASS]; }; slimrec = derive2 { name="slimrec"; version="0.1.0"; sha256="1qzcvk7z8y11hwmybvppk1gf8di596zxy7qs22fclp6h6y18s377"; depends=[assertthat bigmemory glmnet Matrix pbapply]; }; slippymath = derive2 { name="slippymath"; version="0.3.1"; sha256="0dqnv089mcfxvpsc1px7mblim6m77n59xpcysz75jrvpc5q4lsrg"; depends=[png purrr raster]; }; slm = derive2 { name="slm"; version="1.1.0"; sha256="1y9pw9lgxp2xz6smbhg0rayjszm83kxf2an9rk9pdhlmx6670bbf"; depends=[capushe expm ltsa sandwich]; }; sloop = derive2 { name="sloop"; version="1.0.1"; sha256="00fk5fr5zsk2qxc1kfhmshhjxgnamm3401089sx8m2l529zd6r8j"; depends=[codetools crayon purrr rlang tibble]; }; - slouch = derive2 { name="slouch"; version="2.1.2"; sha256="0xf2saf4q0ywmng3avl6hjd2wjjzfpbwlnagggvs8ri41jyk7gma"; depends=[ape memoise]; }; + slouch = derive2 { name="slouch"; version="2.1.4"; sha256="09ffx657hs913prv0rifhsz60h39lk0h4z28myx6yzxcfdk4f48d"; depends=[ape crayon memoise]; }; slowraker = derive2 { name="slowraker"; version="0.1.1"; sha256="0glc3ldvbqkvzfvhs4s5mzx1kfz05px4k7rx5jfp9dm9d0gfpvsx"; depends=[NLP openNLP SnowballC]; }; slp = derive2 { name="slp"; version="1.0-5"; sha256="0i9iv0s1wdp9cyzr8qixh6c7qvrj025vll13gyf8dfbidrp6hryl"; depends=[mgcv]; }; slurmR = derive2 { name="slurmR"; version="0.3-0"; sha256="0301h8fzkghk41afkfprkbf3nia07apgjly0njan07vhk144k0qr"; depends=[]; }; sm = derive2 { name="sm"; version="2.2-5.6"; sha256="0c4whcx879gb4lwvqnzxl5n9xgpcqh2c54ip9ami3mwfprzcv45q"; depends=[]; }; smaa = derive2 { name="smaa"; version="0.3-0"; sha256="0y7j4q147fdk7fffyinc803mfzzsmcdfx8bp695w3wkq1wwy9kyl"; depends=[]; }; - smac = derive2 { name="smac"; version="1.0"; sha256="1inn7i5k0q5vln24kazh3gl3szf6lxwnjr2rw70jcyn9dr9iy952"; depends=[]; }; - smacof = derive2 { name="smacof"; version="2.0-0"; sha256="06gx24arv1md32vsj17lbq42vxpvds7qxwap4x12hj5nyxv4n7yy"; depends=[candisc colorspace doParallel ellipse foreach Hmisc MASS nnls plotrix polynom weights wordcloud]; }; + smacof = derive2 { name="smacof"; version="2.1-0"; sha256="0bylwa9dwr0q8saifh4fag0srs84g6chvfmslhs8vx42alkq94pz"; depends=[candisc colorspace doParallel e1071 ellipse foreach Hmisc MASS nnls plotrix polynom weights wordcloud]; }; smacpod = derive2 { name="smacpod"; version="2.0.4"; sha256="0dh8n3rxrffr09a8q7vdlin9hq5f2v0hjjjqsmzgwf7ln1b9wcr1"; depends=[abind pbapply plotrix sp spatstat]; }; smallarea = derive2 { name="smallarea"; version="0.1"; sha256="0jcv0xbh8v4g6zxxs4yyd0divwzk9d2w7g01r4s65khxvy3av7yx"; depends=[MASS]; }; smam = derive2 { name="smam"; version="0.5.3"; sha256="0hns3w6sm06fwxy3aybaz21j8bii5m5ps932ldilh0dj7rsqii6a"; depends=[doParallel doSNOW EnvStats foreach Matrix nloptr numDeriv Rcpp RcppGSL RcppParallel]; }; @@ -13642,7 +13674,6 @@ in with self; { smco = derive2 { name="smco"; version="0.1"; sha256="1sj3y1x6pc32cwzyhn9gaxs964xh5xl4vw08hsa8kfcxhh2r0s99"; depends=[]; }; smcure = derive2 { name="smcure"; version="2.0"; sha256="1j7fxnb0sx57a0l929c3haz4f1y829ymlq0cvdh0cia4qp6ydv60"; depends=[survival]; }; smdata = derive2 { name="smdata"; version="1.2"; sha256="1p26b46kg4hmhs2fl9h9vchar00llqv58ylx438bjgzz4f229qvr"; depends=[]; }; - smdc = derive2 { name="smdc"; version="0.0.2"; sha256="1j6xnzjbmmakbmk3lyjck3bsy8w8hyd9d8h04s4gbddhci283mqm"; depends=[proxy tm]; }; smds = derive2 { name="smds"; version="1.0"; sha256="0aqf3wfn6mlsl8a32gaf9qdpyxwsx19g6mma8qzgaysdmk6vhbpd"; depends=[MASS]; }; smerc = derive2 { name="smerc"; version="1.1"; sha256="0kbjb1335wcljwj2nyxipxndzrsrrrims90zbplpdlz3h6afshii"; depends=[maps matrixStats pbapply randtoolbox smacpod sp]; }; smfsb = derive2 { name="smfsb"; version="1.3"; sha256="1328w7zpwd3nam6ha4bh14g919jjl87v323ijmbp1j71gc64nn2i"; depends=[abind]; }; @@ -13651,12 +13682,12 @@ in with self; { smnet = derive2 { name="smnet"; version="2.1.1"; sha256="0fa47zgm7jxvs3jfai54wsc6qa9ycqw4f3yr941fvkczwzh4ch02"; depends=[DBI RSQLite spam SSN]; }; smog = derive2 { name="smog"; version="2.0"; sha256="1nrvh51kvh290w9wdyil5isx5xfz2yw8nmhm6f32hajipgn9j5fl"; depends=[doParallel foreach Rcpp RcppArmadillo Rdpack tidyr]; }; smoke = derive2 { name="smoke"; version="2.0.0"; sha256="1jdl5swg66vqryd40rrqpsnkczmsiaf5x6vlfv774vbnrc6q2v2g"; depends=[Rdpack]; }; - smoof = derive2 { name="smoof"; version="1.6.0"; sha256="0xkwj01pgzvxr6cxxmml0f4375s2s8kni69immcpw66avs2ljw5m"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo RJSONIO]; }; - smooth = derive2 { name="smooth"; version="2.5.4"; sha256="0apjjqzb36z71500lyccm9jdss7h7736g8lrs3rfz5f6d2k5yqf6"; depends=[forecast greybox nloptr Rcpp RcppArmadillo zoo]; }; + smoof = derive2 { name="smoof"; version="1.6.0.2"; sha256="14zwrsyhbrwggwiaq8vxps8cgkp6glb14b2cp2ph1ppa0abvlbfq"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo RJSONIO]; }; + smooth = derive2 { name="smooth"; version="2.5.5"; sha256="0ryjjfl6j7g47ah04q62hgrjz6pl17f31nh27z7k1frgpyza13pg"; depends=[forecast greybox nloptr Rcpp RcppArmadillo zoo]; }; smoothAPC = derive2 { name="smoothAPC"; version="0.3"; sha256="11f34qqdm8m0hmy9jf29q439slchvmqgdfrmak7vcdhfnjcylr5r"; depends=[colorspace lmtest quantreg rgl SparseM]; }; smoothHR = derive2 { name="smoothHR"; version="1.0.2"; sha256="0l33xg3p9pyfrp4rhavz8m1jakk4wr8i14g6jjiizb03rpxdpzqy"; depends=[survival]; }; smoothROCtime = derive2 { name="smoothROCtime"; version="0.1.0"; sha256="03iihjxb5xdaf74cm9cajqqjli754mdmv5v1y4hla9vv23017ca1"; depends=[ks]; }; - smoothSurv = derive2 { name="smoothSurv"; version="2.0.1"; sha256="0srb6ms1ag3mllkf2rh0pnji9zp8c11mh8i5zgb6zh1nx2s86x93"; depends=[survival]; }; + smoothSurv = derive2 { name="smoothSurv"; version="2.1"; sha256="1y6mjkvy6fi2j2gy7n8lslpxj2mqzs2wsi10cvlmgkx33mvhvkff"; depends=[survival]; }; smoother = derive2 { name="smoother"; version="1.1"; sha256="0nqr1bvlr5bnasqg74zmknjjl4x28kla9h5cxpga3kq5z215pdci"; depends=[TTR]; }; smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; }; smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; @@ -13668,19 +13699,19 @@ in with self; { smpic = derive2 { name="smpic"; version="0.1.0"; sha256="0ff2146gjcrc6nvrbf4779jh076abhb843zzlk2zvqir13qfap61"; depends=[ggplot2 imager stringr]; }; sms = derive2 { name="sms"; version="2.3.1"; sha256="0vr5jy8bxbczaqr9kg0fnanxhv9nj51yzgacrb63k33cs85p981m"; depends=[doParallel foreach iterators]; }; smss = derive2 { name="smss"; version="1.0-2"; sha256="04lgfdcvnzpnpplyl62fy7slyiy8wkqpjjrzmclgqis3c9zkkncp"; depends=[]; }; - smurf = derive2 { name="smurf"; version="1.0.2"; sha256="08k64y0wb9da7ji94zra411zwcvssi0lb1drh98p6w9pwvn552rf"; depends=[catdata glmnet MASS Matrix mgcv RColorBrewer Rcpp RcppArmadillo speedglm]; }; - sn = derive2 { name="sn"; version="1.5-4"; sha256="0x46gxkplxbnhaqbpiav1r4xlv4ib7n57kxmca7scqwj22y7wrs6"; depends=[mnormt numDeriv]; }; + smurf = derive2 { name="smurf"; version="1.0.4"; sha256="1bk7dbz8dq2f1xam1bbjhn373dclf10cnx445gpp3hg84s1vaw3r"; depends=[glmnet MASS Matrix mgcv RColorBrewer Rcpp RcppArmadillo speedglm]; }; + sn = derive2 { name="sn"; version="1.5-5"; sha256="0ymyyc0di1g2b11wzljiih05z3rxck48wn74bygg3fiby973z49f"; depends=[mnormt numDeriv]; }; sna = derive2 { name="sna"; version="2.5"; sha256="1j3i6300m686qqfmyvadim377cd3mplzgj6mandygw8brg50id8k"; depends=[network statnet_common]; }; - snahelper = derive2 { name="snahelper"; version="1.0.0"; sha256="15x7qp36lzs61ll3gqyjmxix0pqnyf2rz799mxzkzxzwqsp0srwi"; depends=[colourpicker formatR ggplot2 ggraph graphlayouts igraph miniUI rstudioapi shiny]; }; + snahelper = derive2 { name="snahelper"; version="1.1.0"; sha256="0fc1xilbc7dr5gsrhlp8zgbjppxi44lifsj79kh79783w8nyfqm1"; depends=[colourpicker DT formatR ggplot2 ggraph graphlayouts igraph miniUI rstudioapi shiny]; }; snakecase = derive2 { name="snakecase"; version="0.11.0"; sha256="1ky1x2cp5rd0ffd9m1fji9sq4z4jsrpxzg30brw8bb4ihfjj114r"; depends=[stringi stringr]; }; snappier = derive2 { name="snappier"; version="0.1.0"; sha256="0334zwhqdl3lfw7rg8ql7z10qj8jjrm17yi9mgdcxnzaf3f1p859"; depends=[]; }; snapshot = derive2 { name="snapshot"; version="0.1.2"; sha256="0cif1ybxxjpyp3spnh98qpyw1i5sgi1jlafcbcldbqhsdzfz4q10"; depends=[]; }; + snem = derive2 { name="snem"; version="0.1.1"; sha256="1r8l7cs1y82fh7bdfl18ilw4fria1cabghqddnfr34vfp85cndk9"; depends=[mvtnorm]; }; snfa = derive2 { name="snfa"; version="0.0.1"; sha256="01k2nw8b8mwsd07jijfqk3rj88l9m36c5jai7qma56fjxx23s3wb"; depends=[abind ggplot2 prodlim quadprog Rdpack rootSolve]; }; snht = derive2 { name="snht"; version="1.0.5"; sha256="0k8w1118b2qrf5zfi902gm6zf7b1mwv7py7wg57vsibh2r2ra8ah"; depends=[ggplot2 gridExtra mgcv plyr reshape2 zoo]; }; snipEM = derive2 { name="snipEM"; version="1.0.1"; sha256="1ls3c9f47lgrnja8p34iz2md2mf5jva9rn5n1h3a43zs29g019v8"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; snn = derive2 { name="snn"; version="1.1"; sha256="0yywn3v1iz9xizwli3gmzprkx66b5a813mbp8hq2vsj8n4lfj8r5"; depends=[]; }; snnR = derive2 { name="snnR"; version="1.0"; sha256="0qrl5ivpmipibszx8k9fvd8g462zzdcmzbjj1hb8apv4z79gzima"; depends=[]; }; - snotelr = derive2 { name="snotelr"; version="1.0.1"; sha256="04kazyq5hhiznh0g1qd5l6yh82kjkvd1n4hslisdwas2v3wr2h82"; depends=[httr magrittr memoise RSelenium rvest shiny wdman xml2]; }; snow = derive2 { name="snow"; version="0.4-3"; sha256="1n3n8pva9s34fvlw32yng0x416lmbv7q1fsd0ywa4kikmxym64l5"; depends=[]; }; snowFT = derive2 { name="snowFT"; version="1.6-0"; sha256="00rq2xibzhx7441v9jg138a4fkmx28hifs4yyj3pwi8najf0df4n"; depends=[rlecuyer snow]; }; snowboot = derive2 { name="snowboot"; version="1.0.1"; sha256="0mkmmycfkl100fnmj2hs246bra4fvdr2sas1axw8z1w0ajdab1vy"; depends=[igraph Rcpp Rdpack VGAM]; }; @@ -13699,14 +13730,15 @@ in with self; { socceR = derive2 { name="socceR"; version="0.1.1"; sha256="1vd0r3vixavg1br2q3kfn3nvl7dw854vkcfwcvyw411k84ivb13y"; depends=[Rcpp]; }; social = derive2 { name="social"; version="1.0"; sha256="0ny81bhj80rlwwa6cgbkdz2rxz6bp0f3nvjr1sqxr4s8l8rnf4ic"; depends=[Rcpp]; }; socialmixr = derive2 { name="socialmixr"; version="0.1.6"; sha256="0hrkylasyaalsh4gsazgfz5vyqvwnq5n4lzqmzjs2njlrkgwwf5y"; depends=[countrycode curl data_table httr jsonlite lubridate oai stringr wpp2015 XML]; }; - sociome = derive2 { name="sociome"; version="1.3.0"; sha256="0anynmpb6i8hwp5b0axkmfwsdyfzwd28g26ril2i3mlcivkgjyg4"; depends=[censusapi dplyr magrittr mice psych purrr rlang stringr tidycensus tidyr]; }; - socviz = derive2 { name="socviz"; version="1.0.0"; sha256="14713g5saa167c5wk06i9v5708cj60znc8a7c3a2wpk0h2idfjlb"; depends=[dplyr fs magrittr rlang tibble]; }; + sociome = derive2 { name="sociome"; version="1.3.2"; sha256="1iw8pv5vv0yfz2nrgniz66i4b6ah4yqbk03b5ac3dnxdslki2l7f"; depends=[censusapi dplyr magrittr mice psych purrr rlang stringr tidycensus tidyr]; }; + socviz = derive2 { name="socviz"; version="1.1"; sha256="19naaiqxbqh8vmjx2ijd012lbxam3750zni491vp6aidwaqjznfw"; depends=[dplyr fs magrittr rlang tibble]; }; sodavis = derive2 { name="sodavis"; version="1.2"; sha256="1jf5sml51qxlpgv5b1rvyig4dm4ijw2hpnk85zf790jp22xm64jw"; depends=[MASS mvtnorm nnet]; }; sodium = derive2 { name="sodium"; version="1.1"; sha256="1zxzi8xvxnhgcd5qrylf08nz1cdq3aslrswjas440qg63ypmbf6w"; depends=[]; }; sofa = derive2 { name="sofa"; version="0.3.0"; sha256="10f01a23bq6a30f95cilfan588dg0bg36y7g14q46rmcz15cqbrx"; depends=[crul jsonlite mime R6]; }; softImpute = derive2 { name="softImpute"; version="1.4"; sha256="07cxbzkl08q58m1455i139952rmryjlic4s2f2hscl5zxxmfdxcq"; depends=[Matrix]; }; softclassval = derive2 { name="softclassval"; version="1.0-20160527"; sha256="1f5qj5sajy3dg0mgss6f9w6v5a2prcypld9jcv457bd4n4a409kr"; depends=[arrayhelpers svUnit]; }; softmaxreg = derive2 { name="softmaxreg"; version="1.2"; sha256="0y1r4n83sv2744lpli65aip0c0cq823asb8gw9yy9yjjc9sbyr9s"; depends=[]; }; + soilDB = derive2 { name="soilDB"; version="2.5"; sha256="10jb49yiqvvcvl84r7xys5gyr710ypvai7fn5sp6nvcm1bqgrwkq"; depends=[aqp curl lattice plyr raster reshape2 sp xml2]; }; soilassessment = derive2 { name="soilassessment"; version="0.1.1"; sha256="0vxw0wzc2fw1asasnkfc7mzz616l243dh27vn2fqm8sw7d3509ji"; depends=[arm caret Cubist e1071 FuzzyAHP Hmisc kernlab maptools nnet randomForest raster rgdal rpart soiltexture sp]; }; soilcarbon = derive2 { name="soilcarbon"; version="1.2.0"; sha256="1gxq7np5xh3jcqbsf8xva4b82rv6rab2j23mbkc4pjs6nbnzvzba"; depends=[devtools ggplot2 openxlsx shiny]; }; soilphysics = derive2 { name="soilphysics"; version="3.1"; sha256="11c094bqbwhggh0n3hdva1321gqzz2k1b7v3767wyyk1xpgzg98r"; depends=[boot MASS rpanel tkrplot]; }; @@ -13715,7 +13747,6 @@ in with self; { sokoban = derive2 { name="sokoban"; version="0.1.0"; sha256="07r2zv9rynvw06fpncrz3rsmkdy6z2pcvmm559bhs428kmnq2xib"; depends=[]; }; solaR = derive2 { name="solaR"; version="0.45"; sha256="1vxpwaizjxy27r54anhf48pf97lm4ck750m0p4kmh716irmhp319"; depends=[lattice latticeExtra RColorBrewer zoo]; }; solarPos = derive2 { name="solarPos"; version="1.0"; sha256="0004da7vqpq14q5lhs8vyvjl99j8gzxd5wrlw5d1vwfns3ica0q5"; depends=[]; }; - solarius = derive2 { name="solarius"; version="0.3.0.2"; sha256="17c765nxq81xshyyl4lfhqjmgvmhn9xyzc6x4qd33wvhh4148f38"; depends=[data_table ggplot2 plyr]; }; solartime = derive2 { name="solartime"; version="0.0.1"; sha256="0q6la6d281zgf1kxhrdvi3b91na60szknq0fvldvlnszlqb5vkgs"; depends=[lubridate]; }; solitude = derive2 { name="solitude"; version="0.2.1"; sha256="0n4f59bjdcqfclagpjric965zsl1jfl8p194p64viainb9w11xz4"; depends=[data_table future_apply igraph R6 ranger]; }; solrad = derive2 { name="solrad"; version="1.0.0"; sha256="13ybllvmig1yqsy4md4kazs83hxb9lrlwy64yw1wwr1w6sxpbnp6"; depends=[]; }; @@ -13727,15 +13758,17 @@ in with self; { someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; }; someMTP = derive2 { name="someMTP"; version="1.4.1"; sha256="19bsn8rny1vv9343bvk8xzhh82sskl0zg0f5r59g9k812q5llchn"; depends=[]; }; somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; }; - sommer = derive2 { name="sommer"; version="4.0.8"; sha256="0czizds24y2dj2w3611kydcs40lcg71pa9v2v7j4z73vks2p17mc"; depends=[crayon lattice MASS Matrix Rcpp RcppArmadillo]; }; + sommer = derive2 { name="sommer"; version="4.0.9"; sha256="0nrfra6n2rmgh1kxvsyxxxdy4fy6b2092lfmy5551l3l3hq5q3a2"; depends=[crayon lattice MASS Matrix Rcpp RcppArmadillo]; }; somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; }; somspace = derive2 { name="somspace"; version="1.0.0"; sha256="1cp7mprapidzfphis697r3jipm1ig5198580mmdygvbajxcjib75"; depends=[data_table ggplot2 kohonen maps]; }; sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; }; sonicLength = derive2 { name="sonicLength"; version="1.4.6"; sha256="0jh9zk908afqxacccsph6477cc8sbcc1vxbv7jz8ppgc20imw932"; depends=[]; }; sonicscrewdriver = derive2 { name="sonicscrewdriver"; version="0.0.1"; sha256="03v53blb8f67ybhqys4n0zxf7pk9g024ncq0g9rnj9qpr740zclb"; depends=[ggplot2 seewave tuneR]; }; sonify = derive2 { name="sonify"; version="0.0-1"; sha256="1wkqqgf8fhhaz1dmri2zzr8cdwmx3cgrxbprrz3yily5r1m17d15"; depends=[tuneR]; }; + soobench = derive2 { name="soobench"; version="1.9.18"; sha256="06wzlxdw0l6jc1zqsgkn120ibprfalwqd38xh7dpi30vdqiqskcc"; depends=[]; }; soptdmaeA = derive2 { name="soptdmaeA"; version="1.0.0"; sha256="03n1y82myq0rz14awjnx9nx1dz3dxqq58m13cw7a7ncap7fmw9r5"; depends=[igraph MASS Matrix]; }; soql = derive2 { name="soql"; version="0.1.1"; sha256="12wvbxy9xx140b7mga4ma7hkg4q6kv549gkq15fnf4dn8q43x8nf"; depends=[]; }; + sorocs = derive2 { name="sorocs"; version="0.1.0"; sha256="0gy23rldhnlz6jmf9rdzl4mmfkn5gjcavq2jfcz6dgjafl3v9vgl"; depends=[MASS MCMCpack mvtnorm]; }; sortable = derive2 { name="sortable"; version="0.4.2"; sha256="08v78r0vibr0lk09lxm0s0vfkzpp03asqnqpl8jqa6rxcb484fri"; depends=[assertthat ellipsis htmltools htmlwidgets jsonlite learnr shiny]; }; sorvi = derive2 { name="sorvi"; version="0.7.26"; sha256="19lfrc4bdiljs437w3a2bpf7abnkv0934dh929bbj2w1w8rzghjn"; depends=[dplyr ggplot2 RColorBrewer reshape2]; }; sos = derive2 { name="sos"; version="2.0-0"; sha256="0fwv76m0iihzy60kglsdjnlp6800qsll6h0v2435a50lcr53jj8g"; depends=[brew]; }; @@ -13744,45 +13777,42 @@ in with self; { sound = derive2 { name="sound"; version="1.4.5"; sha256="1kbbb614d0fmj9l0yjiwf5yqnl7sby4xklp7qwp6rwjvq9bnm0ab"; depends=[]; }; soundcorrs = derive2 { name="soundcorrs"; version="0.1.0"; sha256="1q02ll4yw7dlz3cmxb7i1svhpjmhxqglsswv1drlkzm8i3gfp9dk"; depends=[]; }; soundecology = derive2 { name="soundecology"; version="1.3.3"; sha256="16h6gbdlyav7wbfisdv1f2zsqhr45liidgj7qqk8giwjxgan8q97"; depends=[ineq oce pracma seewave tuneR vegan]; }; - soundgen = derive2 { name="soundgen"; version="1.6.1"; sha256="1mbxgl7mf4gyr13xf8i5hachlmv1l3khyjwzawb3rm5wl5k7pr81"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs tuneR zoo]; }; + soundgen = derive2 { name="soundgen"; version="1.6.2"; sha256="093i8v2i3np1gny0dsnw3i20n5x67w312sslgabgmibak66cdb37"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs tuneR zoo]; }; source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; }; - sourceR = derive2 { name="sourceR"; version="1.0.1"; sha256="01qxa44s9szaxl0rdcx4p0wn4vby17hdzdjzpsbls3prsnr0jaad"; depends=[assertthat cluster dplyr gplots gtools hashmap R6 reshape2 SPIn tensorA]; }; sourcetools = derive2 { name="sourcetools"; version="0.1.7"; sha256="1jnjir0q2dj724f1mjm6p5h77yzyx6xcqy9r2g7gmcxkxw349627"; depends=[]; }; - sp = derive2 { name="sp"; version="1.3-2"; sha256="0kpjsqh3lzqp1m0avsvm54lazlgwfx3hyf0av3mvbyslsanj42ll"; depends=[lattice]; }; + sp = derive2 { name="sp"; version="1.4-1"; sha256="0fbh865r4py89g6ln8bslig2vbxxwa642p5k5g02rskyhajg35lg"; depends=[lattice]; }; sp23design = derive2 { name="sp23design"; version="0.9"; sha256="1ihvcld19cxflq2h93m9k9yaidhwixvbn46fqqc1p3wxzplmh8bs"; depends=[mvtnorm survival]; }; - spANOVA = derive2 { name="spANOVA"; version="0.99.1"; sha256="0dsi1cj0i5gm3b1wlrb2r5nbw1zmnqiwvgz41s0wmm7wwjsbva3x"; depends=[ape car DT geoR gtools knitr MASS Matrix multcomp multcompView mvtnorm rmarkdown ScottKnott shiny shinyBS shinycssloaders shinythemes spatialreg spdep xtable]; }; + spANOVA = derive2 { name="spANOVA"; version="0.99.2"; sha256="0dlx9wwccq67g4yni3gbrv43f5pgm3mg715q2v8f09r1akhfg5by"; depends=[ape car DT geoR gtools knitr MASS Matrix multcomp multcompView mvtnorm rmarkdown ScottKnott shiny shinyBS shinycssloaders shinythemes spatialreg spdep xtable]; }; spAddins = derive2 { name="spAddins"; version="0.2.0"; sha256="19wbcghcf0f9qvqy92jhsdcpmd9b4lkhxndvr71cyhzga539lh1n"; depends=[magrittr purrr rstudioapi stringr]; }; spBFA = derive2 { name="spBFA"; version="1.0"; sha256="0w50zzizh8ki0ngwjaj92g0lcj79ssllv75a1b4i37hiy4qh4z1m"; depends=[msm mvtnorm pgdraw Rcpp RcppArmadillo]; }; - spBayes = derive2 { name="spBayes"; version="0.4-2"; sha256="0qmh8sdawhssr1jmx9dc56mxxwsgya8spsss88jgg0npvmpl5khb"; depends=[abind coda Formula magic Matrix]; }; - spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.3"; sha256="0syb4x05j878jhcql8prfw1aqxmpi1idxk1d4xl52j32wngkpn8b"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; + spBayes = derive2 { name="spBayes"; version="0.4-3"; sha256="0hllm70dly1niigp9r5645as97phlkba46dp9brcr34080m6w1w9"; depends=[coda Formula magic Matrix sp]; }; + spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.4"; sha256="0mf5ql9a45dkq0dw1l0h03gcnhm6if10faj72jrhgrlcrgzzdfyn"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; spCP = derive2 { name="spCP"; version="1.2"; sha256="0y00k96p96jgp84wbdhqfwsq2fg8c68gc5310rnzpiv3clws27fb"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; - spData = derive2 { name="spData"; version="0.3.2"; sha256="190msrrpn226x27pcnck4ac34f9k4xcn26cyz2apdri2nzkr6zbw"; depends=[]; }; + spData = derive2 { name="spData"; version="0.3.3"; sha256="1v66qkvsx77hvv5c78v760yp0hknf7xzcjir2ri3ha456mz79yl5"; depends=[raster sp]; }; spFSR = derive2 { name="spFSR"; version="1.0.0"; sha256="0094plnjlyhnnjqw3i4an5q95bw6hjy1gzc7zr6wy77faivqsbms"; depends=[class ggplot2 mlbench mlr parallelMap tictoc]; }; - spGARCH = derive2 { name="spGARCH"; version="0.2.0"; sha256="03jn5v5szq2nfihwvv3v966bv48wng2bahyaxlkvik2firdl8j9y"; depends=[Matrix nleqslv Rcpp RcppEigen Rsolnp spdep truncnorm]; }; + spGARCH = derive2 { name="spGARCH"; version="0.2.1"; sha256="0bncjav7ph178phrcpx05lrb0c5fhn0xbhs9bbmrw856ngx4j0s2"; depends=[Matrix nleqslv Rcpp RcppEigen Rsolnp spdep truncnorm]; }; spMC = derive2 { name="spMC"; version="0.3.10"; sha256="0p0s6w7sif02b91b73a0zb2i4i95a8m86dkqmgx6w1jk9h2mgqaz"; depends=[]; }; spMaps = derive2 { name="spMaps"; version="0.4.0"; sha256="0n9693aam7gsclfhijq7cy61l0w4mm5vf3rjaz5w0jrz77lrkprh"; depends=[raster rgeos sp]; }; - spNNGP = derive2 { name="spNNGP"; version="0.1.2"; sha256="0zr2lfvrjlpi6j3xswi974spvhmkbf1ddfb6d8f2zddkfhppfg00"; depends=[coda Formula RANN]; }; + spNNGP = derive2 { name="spNNGP"; version="0.1.3"; sha256="1anl2iak12wd7ljzq1cdw68kp1q4lkdk2h7i8dk1sv9x21mj4ynw"; depends=[coda Formula RANN]; }; spTDyn = derive2 { name="spTDyn"; version="2.0"; sha256="0wandd5iqyqb474096lky04rrgj31gnyqnlmgw8ypxsypd0gqdy0"; depends=[coda sp spacetime spTimer]; }; spThin = derive2 { name="spThin"; version="0.2.0"; sha256="0j10j1cbbwp3baqm3b59rxlnd643mkx1mirlxpnr1ad2g7xpm69f"; depends=[fields knitr spam]; }; spTimer = derive2 { name="spTimer"; version="3.3"; sha256="0vzqig9dq4k6p5s2gbm5arqiih28ghzjx0fs7ml70vx2f181jrxi"; depends=[coda extraDistr sp spacetime]; }; - spaMM = derive2 { name="spaMM"; version="3.0.0"; sha256="1rwgwh4lvpgbplbzrxi08cdmay9q44dv0szcdfnz74wdsgmpxjjs"; depends=[MASS Matrix nlme nloptr pbapply proxy Rcpp RcppEigen]; }; + spaMM = derive2 { name="spaMM"; version="3.1.27"; sha256="1a84nklxipaacndsyd87b8hb5908006416rkcpv60bzinnh1vnrn"; depends=[crayon gmp MASS Matrix minqa nlme nloptr pbapply proxy Rcpp RcppEigen]; }; spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; }; space = derive2 { name="space"; version="0.1-1.1"; sha256="09dpksbda4lg5hax47a9h9shjmggza6583slvdj0fldblykpyxck"; depends=[]; }; spaceNet = derive2 { name="spaceNet"; version="1.2"; sha256="1s2672icxs0qvdhl52xhllgvh1i9mjfrn5j3icyw6h61ljbnhy11"; depends=[MASS mclust permute RcppTN Rfast sna vegan]; }; - spacejam = derive2 { name="spacejam"; version="1.1"; sha256="1mdxmfa1aifh3h279cklm4inin0cx3h0z2lm738bai34j6hpvar7"; depends=[igraph Matrix]; }; spacesRGB = derive2 { name="spacesRGB"; version="1.3-0"; sha256="1flnvrmq0hdrhxmn5djbhc6fanqhmr1i3q5ik7qcxsb0jvnyincd"; depends=[]; }; - spacesXYZ = derive2 { name="spacesXYZ"; version="1.0-4"; sha256="04387yrz9kmr4y10d6dg2z0nn56qafgi1v08jfw5wcwq12cm7052"; depends=[]; }; + spacesXYZ = derive2 { name="spacesXYZ"; version="1.1-1"; sha256="1jxwhpnfbqa2nz86l8sdxxj3qmasw1wmbii7wr8sqp2819jr5lnd"; depends=[]; }; spacetime = derive2 { name="spacetime"; version="1.2-3"; sha256="0nxjp78vdnr8m2nn9czf1rp7b61md4fjfnyqdlgp982x5nb0nz6a"; depends=[intervals lattice sp xts zoo]; }; - spacodiR = derive2 { name="spacodiR"; version="0.13.0115"; sha256="0c0grrvillpwjzv6fixviizq9l33y7486ypxniwg7i5j6k36nkpl"; depends=[colorspace picante Rcpp]; }; - spacom = derive2 { name="spacom"; version="1.0-5"; sha256="0b6yh4q9f0ibwlwyckwaya9m645j22x6bdz9mz3chass8qza6bls"; depends=[foreach iterators lme4 Matrix nlme spdep]; }; - spacyr = derive2 { name="spacyr"; version="1.2"; sha256="1xsiz6zx89vs6ykrkkp011d8fz4ksdgnf5nyaq5ynjr6zv865vks"; depends=[data_table reticulate]; }; + spacey = derive2 { name="spacey"; version="0.1.1"; sha256="1p8kx3d08q9kz1wb286m3d8ckwkhfm5n42m65m4w5gz5kpfx0xfz"; depends=[httr jsonlite magrittr png raster rayshader rgdal]; }; + spacyr = derive2 { name="spacyr"; version="1.2.1"; sha256="1b2ccgwsiqkvp7w37x8k7699c676q16vfrybkrfvyczyhki4s6nw"; depends=[data_table reticulate]; }; spaero = derive2 { name="spaero"; version="0.5.0"; sha256="1r3rgvmkcrkzm6ikbbmnm4rfdrnwgmn4wq21mxgjs2bzg2r72mw6"; depends=[]; }; spagmix = derive2 { name="spagmix"; version="0.3-1"; sha256="0xfrm4i28sy490g5324bc43dxlrgcnzxg27gsd5b81mqi03sry9j"; depends=[abind mvtnorm RandomFields sparr spatstat]; }; spam = derive2 { name="spam"; version="2.5-1"; sha256="0ry0a76cljlmilrzcriiizcidxyhq1i7i9bqhvl1qda81ld8hifi"; depends=[dotCall64]; }; spam64 = derive2 { name="spam64"; version="2.5-1"; sha256="0fni9lwn51n0ax4qk1l1wslhbkfl44ryp5hgjprkql5a26nmv0nq"; depends=[]; }; spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; }; spanish = derive2 { name="spanish"; version="0.4.2"; sha256="15drc11lh0qxpww50p0smi8qxfbln82bx0yd74jqf71irhk5jxyp"; depends=[magrittr xml2]; }; - spant = derive2 { name="spant"; version="0.19.0"; sha256="1am4xvvrg71w2151gsidcbhfbchgb6q76zghn7qgv3xlihfvxgzc"; depends=[abind complexplus fields foreach magrittr MASS matrixcalc miniUI minpack_lm mmand nnls oro_dicom plyr pracma ptw readr RNifti RNiftyReg shiny signal smoother stringr svd tibble viridisLite]; }; + spant = derive2 { name="spant"; version="1.2.1"; sha256="07mxqqpssmcgk8zyq1xmqbw1scajh6vq17zl66mp6ja1ayqyw8cb"; depends=[abind complexplus fields foreach irlba lsei magrittr MASS matrixcalc miniUI minpack_lm mmand nloptr nnls numDeriv oro_dicom plyr pracma ptw readr RNifti RNiftyReg shiny signal smoother stringr tibble viridisLite]; }; sparcl = derive2 { name="sparcl"; version="1.0.4"; sha256="138krflvfdlx4hlh90mswds51i8aw2vv00gm5lgkfsvxj4w324jg"; depends=[]; }; spark_sas7bdat = derive2 { name="spark.sas7bdat"; version="1.2"; sha256="1kvzfjhf1q5jzlq5d04s7d96j63vnvqqrh8s03rwkl79h1dhqhhp"; depends=[sparklyr]; }; sparkTable = derive2 { name="sparkTable"; version="1.3.0"; sha256="1fc2nihxfrjpmxm9g9296mz5czd3ydvi1v37g8qgb20j7b73c64h"; depends=[boot Cairo ggplot2 gridExtra pixmap Rglpk RGraphics shiny StatMatch xtable]; }; @@ -13822,13 +13852,11 @@ in with self; { spate = derive2 { name="spate"; version="1.7"; sha256="1cr5jjrycfj9larsqgzfakk4qgfz8m5djg4ddzk6s3lg2iw06y43"; depends=[mvtnorm truncnorm]; }; spatgraphs = derive2 { name="spatgraphs"; version="3.2-1"; sha256="0n7f3r4ahv1w5mwx5mnib3g4263kz73rh1fcfk5wb12y52x8n1iz"; depends=[Matrix Rcpp]; }; spatial = derive2 { name="spatial"; version="7.3-11"; sha256="04aw8j533sn63ybyrf4hyhrqm4058vfcb7yhjy07kq92mk94hi32"; depends=[]; }; - spatial_tools = derive2 { name="spatial.tools"; version="1.6.0"; sha256="1jh9psc2im0mp52mmz596x5h64m6w1d8hibnm7x52di5j2jp29vz"; depends=[abind doParallel foreach iterators mmap raster rgdal sp]; }; + spatial_tools = derive2 { name="spatial.tools"; version="1.6.2"; sha256="18x935ly2jpnah2dik44nsbin1wyy9v27galyf176bzmjhm029bb"; depends=[abind doParallel foreach iterators mmap raster rgdal sp]; }; spatialClust = derive2 { name="spatialClust"; version="1.1.1"; sha256="042yrmh1rb0hxynxlbdpcissgy9zazs5aqx7vj388ibynzijck3r"; depends=[ggplot2 maptools rgeos sp]; }; spatialCovariance = derive2 { name="spatialCovariance"; version="0.6-9"; sha256="1m86s9a059spp97y37dcirrgjshcqzpdj11cq92vji624w4nrhlb"; depends=[]; }; - spatialEco = derive2 { name="spatialEco"; version="1.3-0"; sha256="1l6ig6cw5hlm5g9ihah7ky5z82dcccnzr0ih4h5x7givrdrrd86g"; depends=[cluster dplyr EnvStats fasterize maptools MASS RANN raster RCurl readr rgeos rms sf sp SpatialPack spatstat spdep velox yaImpute]; }; spatialfil = derive2 { name="spatialfil"; version="0.15"; sha256="01fbn9zblz7rjsgqy3ikdqpf0p0idvb6m96mf7m7qi2ps5f48vzj"; depends=[abind fields]; }; - spatialfusion = derive2 { name="spatialfusion"; version="0.6"; sha256="13bpiw1f847nlrsvg6bpgb62pfgm5j47v7cy7x4bqxh497ci263b"; depends=[fields geoR Rcpp rstan SDraw sp]; }; - spatialkernel = derive2 { name="spatialkernel"; version="0.4-23"; sha256="0kvhirh7afk2gfy21pa6117yk6kzbaf2dxfkr1ax3b554rnrv4p0"; depends=[spatstat]; }; + spatialfusion = derive2 { name="spatialfusion"; version="0.6-1"; sha256="0pf0phy391g3pxqq4b9hysl833wlm7vz3ww5abw4c31chy2g07zp"; depends=[fields Rcpp rstan SDraw sp]; }; spatialnbda = derive2 { name="spatialnbda"; version="1.0"; sha256="14mx5jybymasyia752f3vnr5vmswcavbz8bpqr69vlxphw27qkwk"; depends=[mvtnorm SocialNetworks]; }; spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; }; spatialreg = derive2 { name="spatialreg"; version="1.1-5"; sha256="0zdj67rvfvssjch5hwyi4gvyr7pjgfjrkbhnc4q9psfjp9rhggyx"; depends=[boot coda expm gmodels LearnBayes MASS Matrix nlme spData spdep]; }; @@ -13837,12 +13865,12 @@ in with self; { spatialwarnings = derive2 { name="spatialwarnings"; version="1.3.1"; sha256="139m6jaw6f5gglwqrd4f5mzr4vkqk2r1a069971y7ap2klzzbhns"; depends=[ggplot2 plyr Rcpp RcppArmadillo reshape2 tidyr VGAM]; }; spatialwidget = derive2 { name="spatialwidget"; version="0.2"; sha256="105pgsv4dq3pmk9bylb3fxzvp44frfp6xcvq5d01ja4gnwmb35p2"; depends=[BH colourvalues geojsonsf jsonify rapidjsonr Rcpp]; }; spatsoc = derive2 { name="spatsoc"; version="0.1.9"; sha256="1s7vhn3ywsdp91z4psx7nairxcfhblzyvx44v4an4rwhvvhvys3c"; depends=[adehabitatHR data_table igraph rgeos sp]; }; - spatstat = derive2 { name="spatstat"; version="1.63-0"; sha256="0sda6gj4w06fcsamvxwvvwnxhj90ridj16v7mp8diiv463v8rca3"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; + spatstat = derive2 { name="spatstat"; version="1.63-3"; sha256="0a2mavlvk6faqag3xpm38z85ljlgb64xg7bp657r94bwnfhs3d07"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; spatstat_Knet = derive2 { name="spatstat.Knet"; version="1.11-2"; sha256="0jkpj4m44cqid5jdn7fwg3cl15lsmc0dp3bzp6759spivsx1yzq1"; depends=[Matrix spatstat spatstat_utils]; }; spatstat_data = derive2 { name="spatstat.data"; version="1.4-3"; sha256="18lfj5vkwxgf5w9qz0g5al3zy8y2yi3bnd13w24hszfc82nbcmc9"; depends=[Matrix spatstat_utils]; }; spatstat_local = derive2 { name="spatstat.local"; version="3.6-0"; sha256="19kv85smy8jp2bx1mgppav50k07xm8zvmf7snzj29rrspiws7sig"; depends=[spatstat spatstat_utils tensor]; }; - spatstat_utils = derive2 { name="spatstat.utils"; version="1.15-0"; sha256="031ar9yycg8kwknn0aa0pn12qjw722payff9jdzz8fb91drpvq4h"; depends=[]; }; - spatsurv = derive2 { name="spatsurv"; version="1.2"; sha256="0acg6n5qs3z9c7y2n3amla61dm3z1p16njkx0h52dlgdbj5v1nhn"; depends=[fields geostatsp iterators lubridate Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; }; + spatstat_utils = derive2 { name="spatstat.utils"; version="1.17-0"; sha256="08h9kzkkxvlnngxnv5mdylfali5jj4yhgbr8kvf8l7glswz6ik9r"; depends=[]; }; + spatsurv = derive2 { name="spatsurv"; version="1.4"; sha256="0sw5a532p3bbbh3pxvscmmmg6jw126ncpihxiv01bpwmf85ld4z2"; depends=[fields geostatsp iterators lubridate Matrix RandomFields raster RColorBrewer rgeos sp spatstat stringr survival]; }; spbabel = derive2 { name="spbabel"; version="0.5.0"; sha256="0jwv3mirm5wkfqja0nwy25nfndis8px4awpjh4hk9bi77dfy14bf"; depends=[dplyr sp tibble]; }; spc = derive2 { name="spc"; version="0.6.3"; sha256="0ik5qmf0f0l77rbg78rp8v606h0d1qp4kccl6j3vqfb2hjsqb7r0"; depends=[]; }; spc4sts = derive2 { name="spc4sts"; version="0.5.2"; sha256="039z6dnry5c2brmh7jsnb6cvb7a8nig1rrf4d4i5bpifi2x1hf06"; depends=[gridExtra LS2Wstat rpart]; }; @@ -13862,13 +13890,12 @@ in with self; { spec = derive2 { name="spec"; version="0.1.7"; sha256="0zgs9yki11wysvjnx88gl8iv0mcsbrasg29sbasp0855x5l8cg8k"; depends=[csv encode magrittr]; }; speccalt = derive2 { name="speccalt"; version="0.1.1"; sha256="0j7rbidmmx78vgwsqvqjbjjh92fnkf2sdx0q79xlpjl2dph7d6l6"; depends=[]; }; specklestar = derive2 { name="specklestar"; version="0.0.1.7"; sha256="04vm989yi31vqnf5rs6cdyikm4jzfd9njxh0ls3dvjrg19ipsnmn"; depends=[Rcpp]; }; - spectacles = derive2 { name="spectacles"; version="0.5-0"; sha256="0i1kzp0fpljcvkws15w3iwgpjig2llhlrfs5blk562kgb7vwshqm"; depends=[baseline epiR ggplot2 plyr reshape2 signal stringr]; }; + spectacles = derive2 { name="spectacles"; version="0.5-2-2"; sha256="0nr2s6mnnir7jwrv80s2vk8wffqd7dl7xj82ss1idshqxk0dliz3"; depends=[baseline epiR ggplot2 plyr reshape2 signal stringr]; }; spectral = derive2 { name="spectral"; version="1.3"; sha256="1x5fskivs08wh1ka63i40m1mzsgq1vl25dglzbk9qywxxphvfdmn"; depends=[lattice rasterImage]; }; spectral_methods = derive2 { name="spectral.methods"; version="0.7.2.133"; sha256="0k8kpk94d2qzqdk3fnf6h9jmwdyp8h3klr0ilm5siwq5wkcz339l"; depends=[abind DistributionUtils foreach JBTools ncdf_tools nnet raster RColorBrewer RNetCDF Rssa]; }; spectralAnalysis = derive2 { name="spectralAnalysis"; version="3.12.0"; sha256="0mz01hx86qi65k6vzz9k1j9q7gi10dh14cqvrlfy93f3kmi52q0x"; depends=[baseline BiocGenerics data_table ggplot2 hNMF jsonlite magrittr NMF nnls plotly plyr RColorBrewer signal viridis]; }; spectralGP = derive2 { name="spectralGP"; version="1.3.3"; sha256="1jf09nsil4r90vdj7n1k6ma9dzzx3bwv0fa7svil9pxrd2zlbkbs"; depends=[]; }; spectralGraphTopology = derive2 { name="spectralGraphTopology"; version="0.2.0"; sha256="02j374zsz4ba8ldy52x43rih1p77b56cv5xlbycj5wmkzny2gzx1"; depends=[MASS Matrix progress Rcpp RcppArmadillo RcppEigen rlist]; }; - spectrolab = derive2 { name="spectrolab"; version="0.0.8"; sha256="1hjvi9na94f7n7yr64p0bvh0mzckwmfh36d6zxisrxr08zxwyxzz"; depends=[devtools prospectr RColorBrewer shiny shinyjs usethis]; }; speech = derive2 { name="speech"; version="0.1.0"; sha256="007s32w8qr45x1n40xdh85a329cgmm3809bi62ghnxzfny9vjb07"; depends=[dplyr lubridate magrittr pdftools purrr stringr tabulizer tibble tidyr tm]; }; speedglm = derive2 { name="speedglm"; version="0.3-2"; sha256="1b25zimk0z7ad62yacqdg0zk0qs0jja4i918ym942xfw4j1z3jjz"; depends=[MASS Matrix]; }; spef = derive2 { name="spef"; version="1.0.8"; sha256="1c4hpm19zqh869z8qbixkfbidnygc3fy91d0m2l4bp2s6bq1wdnz"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; }; @@ -13876,14 +13903,14 @@ in with self; { spellcheckr = derive2 { name="spellcheckr"; version="0.1.2"; sha256="09snc1ymzr4njnr3w502b84dqwjjd414higjxqi48jvh27br5k1l"; depends=[data_table dplyr stringr]; }; spelling = derive2 { name="spelling"; version="2.1"; sha256="1j92brq29za3di1723xhmx240ya2v351dvcg0r1xr5yclw1kh3jp"; depends=[commonmark hunspell knitr xml2]; }; spemd = derive2 { name="spemd"; version="0.1-1"; sha256="1aw8dg2fm8qd95bgim2kjwp7ax4b2g78521llsxv7fhdj9hl7rgw"; depends=[MBA sp spdep]; }; - sperich = derive2 { name="sperich"; version="1.5-7"; sha256="1apgq5nsl6nw674dy7bc7r7z962wcmqsia5n67a8n6c5lcgcif3f"; depends=[foreach rgdal SDMTools sp]; }; + sperich = derive2 { name="sperich"; version="1.5-8"; sha256="0v4mnv9nl0dvmmfx10w03k02pwjjnip9526m3j1kpgn6c4wk1h93"; depends=[foreach rgdal sp]; }; sperrorest = derive2 { name="sperrorest"; version="2.1.5"; sha256="126vwk3bxs27gblakc5nplj0k90a21gks9d0kbyanlxc2ihsy243"; depends=[doFuture foreach future future_apply gdata glue magrittr pbapply pbmcapply purrr ROCR rpart stringr]; }; spex = derive2 { name="spex"; version="0.6.0"; sha256="1m56vmp1zacipr8kw4pwh0rpc0jhi8a59351g9c6gpx48ysj9sbk"; depends=[quadmesh raster reproj sp]; }; spfrontier = derive2 { name="spfrontier"; version="0.2.5"; sha256="1vnvwcjbhvbmyn5rp4760amzy8k3y156q629fjymw9rw6zy45pbf"; depends=[ezsim moments mvtnorm numDeriv optimx spdep tmvtnorm]; }; spftir = derive2 { name="spftir"; version="0.1.0"; sha256="07vw8igy698jx671cj6hmf6ll9xvaq81fb6la7j95pqbd6jl284z"; depends=[pracma]; }; spgrass6 = derive2 { name="spgrass6"; version="0.8-9"; sha256="05xvdhisad0d7c69mvahzg6pvgvmb6dph50r34981palykic7qhn"; depends=[sp XML]; }; spgs = derive2 { name="spgs"; version="1.0-3"; sha256="0a7zqih8q4imi49in8d2j9wa82savp7d2g4xy4wlwblwf6f2ggsh"; depends=[]; }; - spgwr = derive2 { name="spgwr"; version="0.6-32"; sha256="0xdv0yy6md9kv1aay6xxj1k3x59apflip0qpfvyk2aa2wbn1sx2v"; depends=[sp spData]; }; + spgwr = derive2 { name="spgwr"; version="0.6-33"; sha256="1nbg4jacc4iimn79b60c6q9qf09j35yxa2nmlwwijmixa15gmqyd"; depends=[sp spData]; }; sphereplot = derive2 { name="sphereplot"; version="1.5"; sha256="1i1p20h95cgw5wqp9bwfs9nygm4dxzsggz08ncjs1xrsvhhq9air"; depends=[rgl]; }; sphet = derive2 { name="sphet"; version="1.7"; sha256="0savvqz3v5awsr7kcghg6yzkqdpm01kwp7jrg9ajfb3146gg8mlq"; depends=[Matrix nlme sp spdep]; }; spi = derive2 { name="spi"; version="1.1"; sha256="0gc504f7sji5x0kmsidnwfm7l5g4b1asl3jkn2jzsf2nvjnplx1z"; depends=[]; }; @@ -13891,7 +13918,7 @@ in with self; { spider = derive2 { name="spider"; version="1.5.0"; sha256="1y034v42jxjl3vj87iz5kaizq7fwppmn56z7yyvrrmk5ps4nqr1j"; depends=[ape pegas]; }; spiderbar = derive2 { name="spiderbar"; version="0.2.2"; sha256="1ardf7i0s17k8psch7vv29xnvrhw427id5hx3b8jca5cbz1l2ylb"; depends=[Rcpp]; }; spiders = derive2 { name="spiders"; version="1.2"; sha256="1qklm178bgkgpvrjf024jphsdh9can8300sf0702l4h0rk2daqbq"; depends=[plyr]; }; - spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-14"; sha256="1ha2ngs5jkrcd3ay26vynrd31fqf9pva5r0p954dyfbpbinizxgf"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; }; + spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-15"; sha256="1kg1vqx9zvn8jqh8ygjifpyd00npqz3ljbs7r3zgh28bclhfywai"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; }; spikes = derive2 { name="spikes"; version="1.1"; sha256="080sna0sgii61kai5sirs6cijnvk1012djwfw705di9y2lvk1hqk"; depends=[emdbook]; }; spikeslab = derive2 { name="spikeslab"; version="1.1.5"; sha256="0dzkipbrpwki6fyk4hqlql3yhadwmclgbrx00bxahrmlaz1vjzh2"; depends=[lars randomForest]; }; spinBayes = derive2 { name="spinBayes"; version="0.1.0"; sha256="1qgqxxk4n17wj3q07irm2qj6lwc5188iwwbdkf588hvfy86lwpj8"; depends=[glmnet MASS Rcpp RcppArmadillo]; }; @@ -13905,9 +13932,10 @@ in with self; { splines2 = derive2 { name="splines2"; version="0.2.8"; sha256="0ygzqq0swhcss5v8bn7qg98fpvp3wibbnbzkbpw4nvfd8bg51m1v"; depends=[]; }; splinetree = derive2 { name="splinetree"; version="0.2.0"; sha256="0gqb3kwca42crrx6fj42ryl5pkxvankhp1chdlvi5lgg8mzmqsnl"; depends=[ggplot2 mclust mosaic nlme rpart treeClust]; }; splitFeas = derive2 { name="splitFeas"; version="0.1.0"; sha256="1cfiis32h5kkp8r1mndmj4xss9gw96vdzk7q68q3jhbwqiaxp9rp"; depends=[corpcor matrixStats]; }; - splitTools = derive2 { name="splitTools"; version="0.1.0"; sha256="0xb9hxqm9s9f2pqfz4rs4agmrmyc77ci2agyzvpm2x05vxy39yxi"; depends=[]; }; + splitSelect = derive2 { name="splitSelect"; version="1.0.0"; sha256="044pmsdq1kvs3qjglrdpwq5kxvxfybpaqmqhnmwpw4xlql4afvyc"; depends=[caret doParallel foreach glmnet multicool mvnfast]; }; + splitTools = derive2 { name="splitTools"; version="0.2.0"; sha256="1wbssmlm0k261bk8a1x4zqfprsl0gp38a9asfa8iidsgw3yd9lf5"; depends=[]; }; splitfngr = derive2 { name="splitfngr"; version="0.1.2"; sha256="0cf9y68m72j890a732m0n784nr12ydljr6s8i80f0in6q8lmw8ls"; depends=[lbfgs]; }; - splithalf = derive2 { name="splithalf"; version="0.5.2"; sha256="16ydqj1mjsii18zllm5v24qw8na88sa3ml2s1b0xlc72fvy76646"; depends=[dplyr Rcpp robustbase tidyr]; }; + splithalf = derive2 { name="splithalf"; version="0.7.1"; sha256="0mpg6i6zh4s9sz10gs0h3y1cc1zva7vs805sb3qkghx857psgyw3"; depends=[dplyr ggplot2 patchwork plyr Rcpp robustbase tidyr]; }; splithalfr = derive2 { name="splithalfr"; version="1.0.10"; sha256="08gl60dbjb4nq6ab0w7yj7ac0gnj0zxbvzlg3rkqczvx4r3gwkip"; depends=[dplyr rlang]; }; splitstackshape = derive2 { name="splitstackshape"; version="1.4.8"; sha256="0mpyf2kkfdl69pdc6brl1r6101vyc6pgr7z17s55ppg3y71k4q35"; depends=[data_table]; }; splm = derive2 { name="splm"; version="1.4-11"; sha256="15app94mxs6xlmqqhpa0q041skc4n4l2wfi6pmmhwinrgcqgncln"; depends=[bdsmatrix ibdreg MASS Matrix maxLik nlme plm spam spdep]; }; @@ -13921,9 +13949,10 @@ in with self; { spmoran = derive2 { name="spmoran"; version="0.1.7.2"; sha256="0gqpnam9z6rni7sswdy3il3z5sdal8dlwm1lpzascdg709qgvdd8"; depends=[doParallel fields foreach ggplot2 Matrix rARPACK spdep vegan]; }; spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; }; spnn = derive2 { name="spnn"; version="1.2.1"; sha256="1yj89j7nynfyw1ikm6q5kdwdgiiwxx0aa6kgnri5wfnb4l0356l7"; depends=[MASS Rcpp RcppArmadillo]; }; - spocc = derive2 { name="spocc"; version="1.0.2"; sha256="1mglkbbr2zhy884ilhxy2dkcjlr4aq16z08vs9gc44258i59kzy0"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; }; + spocc = derive2 { name="spocc"; version="1.0.8"; sha256="05x9gax8zwpcp4014ffcml8whclkz0yydhb6jgw4wlljnrz8s92r"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; }; spongebob = derive2 { name="spongebob"; version="0.4.0"; sha256="1ar5173fwx1am5rgjlnczfla6b49g0azl0h9vn89ipw7f71rr5j7"; depends=[]; }; spongecake = derive2 { name="spongecake"; version="0.1.2"; sha256="13fxizbfjvqkhkmxk5bwv2fj2xyjkbxrxicpdgwpg0wsk4dhj3s8"; depends=[ggplot2 jpeg magrittr plyr]; }; + spork = derive2 { name="spork"; version="0.1.6"; sha256="0yih4cl118fkx19l4nbc6bicnpk9nkyfjnmq4ynda5bh8mbybdwm"; depends=[ggplot2 latexpdf png]; }; sporm = derive2 { name="sporm"; version="1.1"; sha256="07sxz62h4jb7xlqg08sj4wpx121n9jfk65196mnxdvb36lqmb4hp"; depends=[]; }; sport = derive2 { name="sport"; version="0.2.0"; sha256="1wb28iaa35naf5aczijb5g0l41yf098f7c20mjmkcd5w04l1mmks"; depends=[data_table ggplot2 Rcpp]; }; spotGUI = derive2 { name="spotGUI"; version="0.2.1"; sha256="1z664ricdsn8c29ks6hslm89f0qq6ls94pz4k256427cs95pk3ay"; depends=[gridExtra httpuv plotly rclipboard rhandsontable shiny shinyBS shinydashboard shinyjs smoof SPOT XML]; }; @@ -13944,7 +13973,6 @@ in with self; { spsur = derive2 { name="spsur"; version="1.0.0.4"; sha256="0av0bay2dyfavsckqzjqr490k05fwfncr0yk1wxv741w35ww9mpx"; depends=[Formula MASS Matrix minqa numDeriv sparseMVN spdep]; }; spsurvey = derive2 { name="spsurvey"; version="4.1.1"; sha256="0ckr2lciqax391g6q6zqsq1bmjbcpp1k8ndzr754vslqn5cibffj"; depends=[crossdes deldir foreign Hmisc MASS rgeos sf sp]; }; spt = derive2 { name="spt"; version="2.5.1"; sha256="04j38d2b35p4798znnc49vqrg8r8bygwi07vybfj3nzimlp2mkrn"; depends=[]; }; - sptemExp = derive2 { name="sptemExp"; version="0.1.4"; sha256="16rp20l65id6jiqify7hii0xpgkiyhgp9xg89b002n0jsy10pgph"; depends=[automap BayesX BayesXsrc bcv deldir doParallel foreach limSolve ncdf4 plyr R2BayesX raster Rcpp RcppEigen rgdal rgeos sp SpatioTemporal]; }; sptm = derive2 { name="sptm"; version="2019.11-25"; sha256="1hdymzngdppmh56dqh0k88n9hg68pbx9rgmimbz4ihnfx2plvadh"; depends=[kyotil survey survival]; }; spuRs = derive2 { name="spuRs"; version="2.0.2"; sha256="00c0hnyrcbkbj269czxbfgmgi88y0vxzm79sxclllkzr9rdd1p53"; depends=[lattice MASS]; }; sqldf = derive2 { name="sqldf"; version="0.4-11"; sha256="0q12vsb53p2wchgp8wfz5bk08wfnm0jxjrakclj4jyy6x3a7ksff"; depends=[chron DBI gsubfn proto RSQLite]; }; @@ -13952,12 +13980,12 @@ in with self; { sqlparseR = derive2 { name="sqlparseR"; version="0.1.0"; sha256="0zcna9y61v1qklpnhrwgv1djg4hyx3k5an32caapszi8qm9nq3x8"; depends=[reticulate]; }; sqlscore = derive2 { name="sqlscore"; version="0.1.4"; sha256="1wvjiy7g0rxfy10vssdrv5li5sbvrin9wjy0ai0nxk503kw7g74k"; depends=[dbplyr]; }; sqlutils = derive2 { name="sqlutils"; version="1.2"; sha256="0dq4idg8i4hv9xg8jllllizqf3s75pdfm1wgncdjj52xhxh169pf"; depends=[DBI roxygen2 stringr]; }; - squash = derive2 { name="squash"; version="1.0.8"; sha256="1x1rw0ny2kas0x8y5vv9czyqmwml7s5d2c8a33vqap0x8q52r4z6"; depends=[]; }; + squash = derive2 { name="squash"; version="1.0.9"; sha256="1x66iamj5pir6l9aqx4x7xylxxjpjrw8vcix9rbhfd0y0y2iqf7z"; depends=[]; }; squid = derive2 { name="squid"; version="0.1.2"; sha256="1sf7q9pp68inr4ikaxm51f31gwxq9ixrsismrnnsby3agq6nsmkb"; depends=[arm data_table ggplot2 lme4 MASS shiny]; }; - sra = derive2 { name="sra"; version="0.1.1"; sha256="03nqjcydl58ld0wq1f9f5p666qnvdfxb5vhd584sdilw1b730ykd"; depends=[]; }; + sra = derive2 { name="sra"; version="0.1.3"; sha256="0bdxgsz177szfqmvffidgkhl0lrdd7c1nzdvh7ijx99zmi5ww71n"; depends=[]; }; srm = derive2 { name="srm"; version="0.3-6"; sha256="0mc97pv1hsmia4v2wyb8yi37i3v1xypfv9xmhjb989xnnysf1lm3"; depends=[Rcpp RcppArmadillo]; }; srp = derive2 { name="srp"; version="1.2.0"; sha256="0xdzfvi7z78xmyxwd8fha3lr86jwmgjba1w8hhn4sv3v5gc9vlkh"; depends=[fda mgcv]; }; - srvyr = derive2 { name="srvyr"; version="0.3.7"; sha256="0mj2s98qlvy9jqsnfhv4l9d35wvk89wi5iygc7s7i8m50ph22glv"; depends=[dplyr magrittr rlang survey tibble tidyselect]; }; + srvyr = derive2 { name="srvyr"; version="0.3.8"; sha256="06fj9z7l7jl75sr2nqj1kp5wks5d7a8ca2d2b6vd3i0y9c4ljkxc"; depends=[dplyr magrittr rlang survey tibble tidyselect]; }; ss3sim = derive2 { name="ss3sim"; version="1.0.3"; sha256="0s2yajlhi07fvqc0rr4msd9g2jrswb83dx55wsxnw925vikqa5kz"; depends=[bbmle foreach ggplot2 gtools r4ss]; }; ssMousetrack = derive2 { name="ssMousetrack"; version="1.1.5"; sha256="069jsp2l63jp4fv2hwadqxpkp89aqmbh439zy66rx55kws75b556"; depends=[BH CircStats cowplot dtw ggplot2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; ssa = derive2 { name="ssa"; version="1.3.0"; sha256="0lbwvw8f88wvlhzd469fww0av0nbi6l76vmmxbps0ifw2q87l00d"; depends=[iterators]; }; @@ -13966,7 +13994,7 @@ in with self; { sscor = derive2 { name="sscor"; version="0.2"; sha256="1kcrr90cxg6k4qkc3pidhkwf4dsnlgbxczxigr2afwpd9cpf104c"; depends=[mvtnorm pcaPP robustbase]; }; ssd = derive2 { name="ssd"; version="0.3"; sha256="1z61n9m6vn0ijawyz924ak0zfl9z13jsb4k4575b7c424ci2p6gy"; depends=[]; }; ssdtools = derive2 { name="ssdtools"; version="0.1.1"; sha256="1vamc0b325i1jmzkqyjp7hym3x66pj9yflvplqa64m5nxr3q1anz"; depends=[abind actuar chk fitdistrplus ggplot2 lifecycle scales VGAM]; }; - sse = derive2 { name="sse"; version="0.7-15"; sha256="1g1hxw1k8wnlzy7qif6334ncp4dxznkf2anhvzcha9iwy56byn1n"; depends=[lattice]; }; + sse = derive2 { name="sse"; version="0.7-16"; sha256="1kxdgbskw7v48jnif4dpmwxpsdznfx8d9q5nkf3ynw9xl38rzv23"; depends=[lattice]; }; ssev = derive2 { name="ssev"; version="0.1.0"; sha256="1iw07gw9vhg073s5kkxh5f1si6p998rc1i2zglnpk5c3pi3l55wp"; depends=[MESS pwr]; }; ssfa = derive2 { name="ssfa"; version="1.1"; sha256="0fkyalhsjmx2sf8xxkppf4vd272n99nbkxh1scidrsgp4jk6z7fx"; depends=[Matrix maxLik sp spdep]; }; ssfit = derive2 { name="ssfit"; version="1.1"; sha256="1fais0msi2ppgfp0vbx3qri7s9zs51i7n90w36xkwwac4f46bq5y"; depends=[survey]; }; @@ -13990,18 +14018,19 @@ in with self; { st = derive2 { name="st"; version="1.2.5"; sha256="0dnyfjcz37gjjv87nrabb11gw2dlkqhq3mrxdpkzahx0w0g0q0pb"; depends=[corpcor fdrtool sda]; }; stR = derive2 { name="stR"; version="0.4"; sha256="120k8k1l8cfy8x746808jym7lnaplgh4s3lycgyq2wia2c35r0rc"; depends=[foreach forecast Matrix quantreg rgl SparseM]; }; stUPscales = derive2 { name="stUPscales"; version="1.0.3.4"; sha256="0a6b38lhi1p0n2hjq2j8aw2vkasdv50cpgllxfxla7ddwbhbk3nk"; depends=[data_table doParallel EmiStatR foreach ggplot2 hydroGOF lattice lmom mAr moments msm xts zoo]; }; - staRdom = derive2 { name="staRdom"; version="1.1.1"; sha256="089fks6qik8wplsfibdvj7r6m89329n3grlm7sdhg4m0m7x2z8yc"; depends=[cdom data_table doParallel dplyr drc eemR foreach GGally ggplot2 gtools matrixStats MBA multiway pracma R_matlab readr stringr tibble tidyr zoo]; }; + staRdom = derive2 { name="staRdom"; version="1.1.7"; sha256="0ccvarga8xd6y1z0ihz5cf37ac5v8d440alizp2c2yds8jc851wg"; depends=[cdom data_table doParallel dplyr drc eemR foreach GGally ggplot2 gtools matrixStats MBA multiway pracma R_matlab readr stringr tibble tidyr zoo]; }; staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; }; stability = derive2 { name="stability"; version="0.5.0"; sha256="0mz7ikfhpfbdcp72klq7fi4zfmx2w18gz46yhwywcc4dyi277m11"; depends=[dplyr ggfortify ggplot2 lme4 magrittr matrixStats reshape2 rlang scales tibble tidyr]; }; stable = derive2 { name="stable"; version="1.1.4"; sha256="01azqg4yi5wl6wfdpjq57w41x5z2b4dsp5n3vpkz24b9avk6rm8s"; depends=[rmutil stabledist]; }; + stableGR = derive2 { name="stableGR"; version="1.0"; sha256="1glxrxqd3gr7npwlzcr2nmsmakydyxg7hswvb85gz1jvc6c6254f"; depends=[mcmcse mvtnorm]; }; stabledist = derive2 { name="stabledist"; version="0.7-1"; sha256="0scar396wiq6wkbkvwp4qrxqc1m075y56p37i6iry5rw796p1i86"; depends=[]; }; stablelearner = derive2 { name="stablelearner"; version="0.1-1"; sha256="19mvk6dzg8zg0nj1q4sraqg6h3zj8xvnfc0jql1xiqas9wcypx7d"; depends=[e1071 MASS partykit]; }; stablespec = derive2 { name="stablespec"; version="0.3.0"; sha256="0m143cq0baj2lyakhr31mqk2lg78jzpdlpv2bhwz6bzzip7mqi22"; depends=[foreach ggm graph matrixcalc nsga2R polycor Rgraphviz sem]; }; - stabm = derive2 { name="stabm"; version="1.1.0"; sha256="17vd3dgfxd1y5f797l8in2sj4hd9fg3s1xdvqjw2x4pgjz0i9w61"; depends=[BBmisc checkmate Matrix]; }; + stabm = derive2 { name="stabm"; version="1.1.1"; sha256="0qigpm078mjj2c1nc45dx6x901786x4rxz25dmn4pkpxmxsz1bzs"; depends=[BBmisc checkmate Matrix]; }; stabreg = derive2 { name="stabreg"; version="0.1.2"; sha256="1jrxyv0d33vd9vdlj1cv1a2qdz8iqgr726f54dgazwsz3cpyy2ia"; depends=[numDeriv]; }; stabs = derive2 { name="stabs"; version="0.6-3"; sha256="17sa0sjxf6h7gx1ga1pxhv17yrz3qisaivbf5cbc3asvshhswqg9"; depends=[]; }; stackoverflow = derive2 { name="stackoverflow"; version="0.7.0"; sha256="0zv8bxzw4pgaa5ra8wsb9p7g8bwffdhc6gqsfrcs61zva7v9izc2"; depends=[]; }; - stacomiR = derive2 { name="stacomiR"; version="0.5.4.2"; sha256="0dhf91wmv3mz120g9bwspgq9qs6d8sk1a2vxd7xl0jibgx6fk22x"; depends=[dplyr ggplot2 gWidgets gWidgetsRGtk2 Hmisc intervals lattice lubridate magrittr mgcv RColorBrewer reshape2 RGtk2 RODBC RPostgreSQL sqldf stacomirtools stringr xtable]; }; + stacomiR = derive2 { name="stacomiR"; version="0.5.4.3"; sha256="0x3b8hp789ahxvd28jk01iyf2fn0mlfj16sx2w2x99jbqpfxqxkd"; depends=[dplyr ggplot2 gWidgets gWidgetsRGtk2 Hmisc intervals lattice lubridate magrittr mgcv RColorBrewer reshape2 RGtk2 rlang RODBC RPostgreSQL sqldf stacomirtools stringr xtable]; }; stacomirtools = derive2 { name="stacomirtools"; version="0.5.3"; sha256="00zpsfrw0gcjbjr3xdxf2wacrr1zfw6wq7a2ycq32pbh2smbkz4k"; depends=[RODBC xtable]; }; stagePop = derive2 { name="stagePop"; version="1.1-1"; sha256="0949r5ibl3sb10sr5xsswxap3wd824riglrylk7fx43ynsv5hzpy"; depends=[deSolve PBSddesolve]; }; stagedtrees = derive2 { name="stagedtrees"; version="1.0.1"; sha256="0ycv4gban5nb1c26riwamvbz5jk740ixhm4f6cmqa0qyyd6nvm9k"; depends=[]; }; @@ -14018,32 +14047,31 @@ in with self; { startup = derive2 { name="startup"; version="0.14.0"; sha256="1s1h0mvb7wxp6scl2l8lrdlgfw85g67xsrihgad4c89ndis9px6l"; depends=[]; }; startupmsg = derive2 { name="startupmsg"; version="0.9.6"; sha256="0vkqxir4ady4dn9s70dfg1fxck2xg8vnmrmxjzvk01i6pc9zyq0x"; depends=[]; }; statGraph = derive2 { name="statGraph"; version="0.3.0"; sha256="1xc10pkv3dq7x98xjqkg7ily89qj2r637y5qlnfvk08n6mzhn8w0"; depends=[igraph MASS]; }; - statVisual = derive2 { name="statVisual"; version="1.1.9"; sha256="1wf0hgvfynw85zqh4wcmjnysmj8701lxm31bnqyf1kawxjqdxyn4"; depends=[Biobase dplyr factoextra forestplot gbm GGally ggdendro ggfortify ggplot2 ggrepel glmnet gplots gridExtra knitr limma magrittr multigroup pheatmap pROC pvca randomForest RColorBrewer reshape2 rmarkdown rpart_plot tibble tidyverse]; }; + statVisual = derive2 { name="statVisual"; version="1.2.1"; sha256="1cc9p9g8lzn0lgh793r977yhqbk89l74m443gnznjlfml69bfb21"; depends=[Biobase dplyr factoextra forestplot gbm GGally ggdendro ggfortify ggplot2 ggrepel glmnet gridExtra knitr limma magrittr pheatmap pROC pvca randomForest RColorBrewer reshape2 rmarkdown rpart_plot tibble tidyverse]; }; statar = derive2 { name="statar"; version="0.7.1"; sha256="0gxchf3mnjvxcp7dg8f1dxbm16hx4ks92z0h0ig7m9l6k6f8adkv"; depends=[data_table dplyr ggplot2 lazyeval matrixStats rlang stringr tidyr tidyselect]; }; - statarepl = derive2 { name="statarepl"; version="0.1.0"; sha256="0byx14mvvigmshd53cxk5wzmfjcky39ywx2km21d2b74s86cb4g5"; depends=[attempt cli crayon jsonlite knitr R6 rlang rstudioapi subprocess]; }; statcanR = derive2 { name="statcanR"; version="0.1.0"; sha256="1pyax5lixbpdg99n525w9z44s0zp5xda6ad605c3id0arki9c8xq"; depends=[curl data_table]; }; statcheck = derive2 { name="statcheck"; version="1.3.0"; sha256="0ivybdcrymlsfv6pg6p5bv70qdvgxf2vgp0kf4r0pf2fcvav1mcp"; depends=[ggplot2 plyr rmarkdown]; }; statcomp = derive2 { name="statcomp"; version="0.1.0"; sha256="0793k14rxiwq98zlrbsmbbkjn5z2ny5c90pia7cx3s77a3wdc96l"; depends=[Matrix zoo]; }; statebins = derive2 { name="statebins"; version="1.2.2"; sha256="0qfs796dk5x983qah32w3npv9mxzljp3g7kffdd0ansn3z7i1zbb"; depends=[ggplot2 gridExtra RColorBrewer scales]; }; states = derive2 { name="states"; version="0.2.2"; sha256="1lw1gljmkn8i8fd4ng5c3jpqrwr0gkiyazppy19dp8xl94m1xa4b"; depends=[dplyr]; }; - statgenGWAS = derive2 { name="statgenGWAS"; version="1.0.2"; sha256="04j3f6604psxr7b5fsb8hq6rzqxqydpizhhz2g014apwjzjfd1vc"; depends=[data_table ggplot2 Rcpp RcppArmadillo sommer]; }; - statgenSTA = derive2 { name="statgenSTA"; version="1.0.2"; sha256="0dm80xx7rqnxnql5x76601i0yy57flfp7ayzm3ia2mwl8h00x02m"; depends=[emmeans ggplot2 ggrepel gridExtra knitr lme4 mapproj maps qtl reshape2 scales SpATS xtable]; }; + statgenGWAS = derive2 { name="statgenGWAS"; version="1.0.4"; sha256="0hmxjm6phgysdkv467nbdmkxfnz55ilaii4hmslsn5p6dl37mqp3"; depends=[data_table ggplot2 Rcpp RcppArmadillo sommer]; }; + statgenSTA = derive2 { name="statgenSTA"; version="1.0.3"; sha256="002c3zchnz3ywsncvxz2b42i7qn6v1l0js9pfs4zg4i2b3vv2g95"; depends=[emmeans ggplot2 ggrepel gridExtra knitr lme4 mapproj maps qtl scales SpATS xtable]; }; stationaRy = derive2 { name="stationaRy"; version="0.5.1"; sha256="1620fdlybn3hr96yngnp802imr9b7n90835lyyd86r2wn6psdzvl"; depends=[downloader dplyr lubridate lutz magrittr progress readr stringr tidyr]; }; stationery = derive2 { name="stationery"; version="0.98.24"; sha256="06qn3ck2cgcyrx8l27ka1y5dq8hyf01wq3hky6876a5g65b1wax2"; depends=[knitr kutils rmarkdown]; }; statip = derive2 { name="statip"; version="0.2.3"; sha256="0kymc3ds1nx0h11ffmm3vmqr1w34gd0k788vf72x2v45h8c1ma2n"; depends=[clue rpart]; }; - statmod = derive2 { name="statmod"; version="1.4.33"; sha256="1fbi5m4c0lingm2vvi0g6jf8f2mg1h01xwyz5rnymrq7gs0ibiks"; depends=[]; }; + statmod = derive2 { name="statmod"; version="1.4.34"; sha256="0yklg64aw5y8kfq5piafnrj1v3jv563iwzzl75g3kllrw23c508s"; depends=[]; }; statnet = derive2 { name="statnet"; version="2019.6"; sha256="17dj6vjnjyqrfhzjq1lys5b29j942kd15zffb69jidni3slf20q9"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm tsna]; }; statnet_common = derive2 { name="statnet.common"; version="4.3.0"; sha256="0ng90i0wm9wlyhjbnmnylc1bbqw396p1dr7f402dyry9x9ck6jl3"; depends=[coda]; }; statnetWeb = derive2 { name="statnetWeb"; version="0.5.5"; sha256="1v2zgbfl975gqhkhxvgdfhgbw7yf9y3p6kqqxldr9zskhmrn7p1x"; depends=[ergm lattice latticeExtra network RColorBrewer shiny sna]; }; statprograms = derive2 { name="statprograms"; version="0.2.0"; sha256="0m7px7fmpz2zzlfdi7rbllcjvcjp8iy94f6fa1w4xinh7vz3y6vq"; depends=[]; }; statquotes = derive2 { name="statquotes"; version="0.2.2"; sha256="1xzc3ndddjrlyld0p4zcwwxkj7i3m3adj7c78x9l4lhlw9mxbbqg"; depends=[stringr tidytext wordcloud]; }; - stats19 = derive2 { name="stats19"; version="1.1.0"; sha256="163v39dvy0gahw2ra0pvri21k02iv9waqb8pv6j55nicvpvha7jm"; depends=[readr sf]; }; - statsExpressions = derive2 { name="statsExpressions"; version="0.2.1"; sha256="009hal1944mnpcc4k1p36p66v04dfzxk75ap119mpp1akdf2s14g"; depends=[BayesFactor boot broomExtra crayon dplyr ez groupedstats metaBMA metafor metaplus psych purrr rcompanion rlang tibble tidyr WRS2 zeallot]; }; + stats19 = derive2 { name="stats19"; version="1.2.0"; sha256="0956s8z8qrkij52fq15ydl15zi3kg5czcx7kjcg20nmby5dqmd34"; depends=[readr sf]; }; + statsExpressions = derive2 { name="statsExpressions"; version="0.3.1"; sha256="0wjqz9ybg95i95hxvasq8igdw8faqlj3pgcvg8n368v165x529kl"; depends=[BayesFactor boot broomExtra dplyr ez ipmisc metaBMA metafor metaplus psych purrr rcompanion rlang sjstats tibble tidyr WRS2]; }; statsguRu = derive2 { name="statsguRu"; version="0.1.0"; sha256="0pqz0la86mk6zp65zzbfwhxyrqqx040p8mrm2j9wqb53r8fbnmqc"; depends=[devtools htmltab plotrix]; }; statsr = derive2 { name="statsr"; version="0.1-0"; sha256="1z0wfj1jxz02x7vl6sr651v85k88wg8rx0k2kkrwzc4ynim8shms"; depends=[BayesFactor broom cubature dplyr ggplot2 gridExtra knitr rmarkdown shiny tidyr]; }; stcos = derive2 { name="stcos"; version="0.2.1"; sha256="1vjz7x9jign82h5kwqcy4jxqjdnhrsgf00dj5m51f6hvvzh3wv5s"; depends=[dplyr Matrix R6 Rcpp RcppArmadillo sf]; }; stcov = derive2 { name="stcov"; version="0.1.0"; sha256="166w929sgd7nanw1zjhzwv50hd5vqhgsrgxnsga4dzrcvndalw70"; depends=[]; }; - stdReg = derive2 { name="stdReg"; version="3.3.0"; sha256="0m907dcgqprnasq17z3wyx7fampsqhwjvg2r0nji5bg9gzag4253"; depends=[data_table drgee numDeriv survival]; }; + stdReg = derive2 { name="stdReg"; version="3.4.0"; sha256="003lp8yshjdql475hdpickwr0fngzn9qps1dzvx8zfy4x51xy8xl"; depends=[data_table drgee numDeriv survival]; }; stddiff = derive2 { name="stddiff"; version="3.0"; sha256="1z6rdchf46aaq0z9bp4dlc4h3swrgyjfdvg40f4lkyg5sgs4sliy"; depends=[]; }; stdvectors = derive2 { name="stdvectors"; version="0.0.5"; sha256="0gxylknr146qyg9aj22md076cdhrsz75dg25a1hx8525cm71nwd6"; depends=[Rcpp]; }; steadyICA = derive2 { name="steadyICA"; version="1.0"; sha256="0mcalbsgajdpk45k9vpyavn079063hw4ihkw72n9wcy5nb0da14g"; depends=[clue combinat MASS Rcpp]; }; @@ -14056,14 +14084,13 @@ in with self; { stepR = derive2 { name="stepR"; version="2.0-4"; sha256="1jv2mv1glzap7nsyxwzil9wif3q3p4y9q0c3kphz49hwwrg20k79"; depends=[digest R_cache Rcpp]; }; stepp = derive2 { name="stepp"; version="3.2.0.0"; sha256="0fnjqbncadscv6ryvqyqf8qqgpfzh2hka5ld2zvw39mjqzy5gadi"; depends=[car survival]; }; steps = derive2 { name="steps"; version="1.0.0"; sha256="03f43fbm7k1i3cgyxzfscjxykjnbyy3d9zyc6kqisghlxgkshnkk"; depends=[future future_apply memuse raster rasterVis Rcpp viridisLite]; }; - stepwise = derive2 { name="stepwise"; version="0.3"; sha256="1lbx1bxwkf9dw6q46w40pp7h5nkxgghmx8rkpaymm6iybc7gyir2"; depends=[]; }; stevedore = derive2 { name="stevedore"; version="0.9.3"; sha256="00zs2bl5h40rwbhnynjw2jbxlixjnk14rxn9chypqg5zgx9pqg2s"; depends=[crayon curl jsonlite yaml]; }; - stheoreme = derive2 { name="stheoreme"; version="1.2"; sha256="14w3jcbs8y8cz44xlq8yybr2jwgk3w7s2msgjhlp1vazy8959s65"; depends=[]; }; - sticky = derive2 { name="sticky"; version="0.5.2"; sha256="0yib9llvlxyzcwam3qd3wxz91mdacvh4v888ifxwjhhjihffqvbj"; depends=[]; }; + sticky = derive2 { name="sticky"; version="0.5.6.1"; sha256="1szfpay9cpdwq6v5fmnjyr00r4zhz6zd2rrl3h88v9l5xpfafi4w"; depends=[]; }; stilt = derive2 { name="stilt"; version="1.3.0"; sha256="0b1bs849hw2wcvaldybxk8h8wgwl6p7x4i7winncvngmhplgrvx4"; depends=[fields]; }; stima = derive2 { name="stima"; version="1.2.1"; sha256="091pjjr2pvd93l01szyj5gr9ixv1h90yd18h678nhpn0fncimszv"; depends=[rpart]; }; stinepack = derive2 { name="stinepack"; version="1.4"; sha256="0crl77gr4x2bz2zp0a0lqiw5iqlrcx7vj67igkbzg64d1fxai85d"; depends=[]; }; stlcsb = derive2 { name="stlcsb"; version="0.1.2"; sha256="08pnj1yb4xcbhnrp2wny8lq9rvcvmsgaza07k4358csfksvmcira"; depends=[dplyr lubridate purrr readr readxl rlang rvest sf stringr tibble xml2]; }; + stlnpp = derive2 { name="stlnpp"; version="0.3.5"; sha256="0n2qbqlh81ql0pqglalvkf9hl8jdz3nkkh7362w9b4qizk9azkzi"; depends=[spatstat]; }; stlplus = derive2 { name="stlplus"; version="0.5.1"; sha256="14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5"; depends=[lattice Rcpp yaImpute]; }; stm = derive2 { name="stm"; version="1.3.5"; sha256="1yyfxaxqc6yq0yq68zhdnhpwpvsyp71dlmivn7zxixfmp932s6cn"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; }; stmCorrViz = derive2 { name="stmCorrViz"; version="1.3"; sha256="1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv"; depends=[jsonlite SnowballC stm tm]; }; @@ -14073,16 +14100,16 @@ in with self; { stoRy = derive2 { name="stoRy"; version="0.1.3"; sha256="146xs8as5f8ig2xpj9k2san4bllqxddsnlflnhl0sy6132vshyr1"; depends=[data_tree R6]; }; stocc = derive2 { name="stocc"; version="1.30"; sha256="0xpf9101094l5l75p9lr64gwh2b8jh4saw6z6m2nbn197la3acpw"; depends=[coda fields Matrix rARPACK truncnorm]; }; stochQN = derive2 { name="stochQN"; version="0.1.2"; sha256="1zwxw95jrpkqgbgwhwdy907v9gqmvn5as4v35a75wvy3nhawka9a"; depends=[]; }; - stochprofML = derive2 { name="stochprofML"; version="2.0.0"; sha256="1101jshd1k3b1gy6fqdirnc17qa2fgjg48rlf8kc3jklmx4n1hfs"; depends=[MASS numDeriv]; }; + stochprofML = derive2 { name="stochprofML"; version="2.0.1"; sha256="0dcg3akrqxs49jr40kzv1lh598l1hgzrvmsi0zsfjm9466rlp1b0"; depends=[MASS numDeriv]; }; stochvol = derive2 { name="stochvol"; version="2.0.4"; sha256="1hb2fgnyn8zxq1j74x00msq3j807y70yxx2s3fq4csrb1935vr85"; depends=[coda Rcpp RcppArmadillo]; }; - stockR = derive2 { name="stockR"; version="1.0.68"; sha256="0pgyxh19csv21vgji1sjpqaaqb1wwz62mnsf85a97ba9aph9lxwb"; depends=[gtools]; }; + stockR = derive2 { name="stockR"; version="1.0.74"; sha256="002i0bhyskwyjjczfa752ghn19hvqhdyzdfkpvci3hb66rh94x65"; depends=[gtools RColorBrewer]; }; stocks = derive2 { name="stocks"; version="1.1.4"; sha256="0b6rl7pfkgzbpwnv7zzkr36hs5f1zb60d16ijslf7g9m25vvcyg6"; depends=[dvmisc Hmisc lubridate quantmod rbenchmark RColorBrewer Rcpp TTR zoo]; }; stoichcalc = derive2 { name="stoichcalc"; version="1.1-3"; sha256="0z9fnapibfp070jxg27k74fdxpgszl07xiqfj448dkydpg8ydkrb"; depends=[]; }; stopwords = derive2 { name="stopwords"; version="1.0"; sha256="1nmi0bpd0c238g5b8ch1v034m5ng9llhs519cgxdrj3sh9fplwlv"; depends=[ISOcodes]; }; stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.2"; sha256="08f16a68kmw0r1acs82sha83m04d81b7zdpxjw5g424zbvagwdj4"; depends=[dplyr ggplot2 lubridate maps plyr rlang stringr tidyr weathermetrics]; }; storr = derive2 { name="storr"; version="1.2.1"; sha256="0409gb6wji3cjxkdcd0wc3jvsx61h3rxd8a3nr018y8rh1rpsaj6"; depends=[digest R6]; }; stosim = derive2 { name="stosim"; version="0.0.14"; sha256="10k8j7manskjsrjc1l44yhy682b1qh0k2jx3cs5k69j2z42mnhmk"; depends=[Rcpp]; }; - stplanr = derive2 { name="stplanr"; version="0.5.0"; sha256="16jyk9n9gvhrqrm6s1m4m3m5jpkdy0wxamfqcbjw91gkjg07caxd"; depends=[curl dplyr geosphere httr igraph jsonlite lwgeom magrittr maptools nabor raster Rcpp RcppArmadillo rgeos rlang sf sp stringr]; }; + stplanr = derive2 { name="stplanr"; version="0.5.1"; sha256="1kaj278icjvz71bxdm4xbld4lrvhi688jszkjrvvf1hbg5m1fw3y"; depends=[curl dplyr geosphere httr igraph jsonlite lwgeom magrittr maptools nabor raster Rcpp RcppArmadillo rgeos rlang sf sp stringr]; }; stpm = derive2 { name="stpm"; version="1.7.7"; sha256="1l40zb9qwshg7saqmgi7c49a3jd93ycrbvmysgzs0q8pl94vgcfs"; depends=[knitcitations MASS nloptr Rcpp RcppArmadillo sas7bdat survival]; }; stpp = derive2 { name="stpp"; version="2.0-3"; sha256="18icnfrlrcibrpw7vqkrhzfx880ak24xk6llwgiqw18r929mq1hw"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; }; strandCet = derive2 { name="strandCet"; version="1.0"; sha256="019cacj0g9f6i8v03rq7qyph7f14d8n0qw0axvczijvnk99q602a"; depends=[boot corpcor MASS minpack_lm mvtnorm numDeriv]; }; @@ -14090,8 +14117,8 @@ in with self; { strapgod = derive2 { name="strapgod"; version="0.0.4"; sha256="19v4g2wny21lb76crais5wxqkgq4hjh7gn961pr2w10kf4ll1vvx"; depends=[dplyr lifecycle rlang tibble tidyr]; }; strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; }; stratEst = derive2 { name="stratEst"; version="0.1.2"; sha256="045wmvkv9jxmazvy0p2dkf3200vy5gf124cv78132ysrnh2vcd4v"; depends=[Rcpp RcppArmadillo]; }; - strataG = derive2 { name="strataG"; version="2.0.2"; sha256="1rf1xf07yb0dzasgig9sfm4i9ggdkjgy5iiysqgdapk3sxs26c8r"; depends=[adegenet ape apex copula data_table DT ggplot2 gridExtra Hmisc pegas phangorn RColorBrewer Rcpp shiny shinyFiles survival swfscMisc]; }; - stratamatch = derive2 { name="stratamatch"; version="0.1.3"; sha256="0mhdxaf2r5aziv9ws01qc15wwwwjjcq7zmlswar9h809vzgpavyi"; depends=[dplyr Hmisc magrittr rlang survival]; }; + strataG = derive2 { name="strataG"; version="2.4.905"; sha256="0mxhrnqqdgwmv2lqs2sgwa95lq5v4dl6vdqyasknbbfd8vddf393"; depends=[adegenet ape apex copula data_table dplyr DT genepop ggplot2 gridExtra Hmisc magrittr pegas phangorn purrr RColorBrewer Rcpp readr rlang rmetasim stringi swfscMisc tibble tidyr]; }; + stratamatch = derive2 { name="stratamatch"; version="0.1.4"; sha256="0dnwlxz3cw66ww4j7fws6qx1na3ngvkw76bv5igra3lxnzkg217q"; depends=[dplyr Hmisc magrittr rlang survival]; }; stratbr = derive2 { name="stratbr"; version="1.2"; sha256="15vkymmc61yz9szhfhc5663hfyqvh499ahwhr9mv1lhv5bikk0kb"; depends=[Rglpk snowfall stratification]; }; strategicplayers = derive2 { name="strategicplayers"; version="1.0"; sha256="19vijrlzawd701vvk9ig7yhzbirh39dxxcwfz8ywwvxxiaky5x55"; depends=[sna]; }; stratification = derive2 { name="stratification"; version="2.2-6"; sha256="1jlks3g8wpqlpci6v0ryyv93agiabdiklmk6ij0pc5icrfiynbhw"; depends=[]; }; @@ -14100,32 +14127,30 @@ in with self; { straweib = derive2 { name="straweib"; version="1.1"; sha256="0hi59p580yg6rj72grq4jx6grv7lmpi2cimp0rbxhkjpj6i1hav9"; depends=[]; }; stray = derive2 { name="stray"; version="0.1.0"; sha256="1pqixk21z1h76672vx5yx9xs6bfacm51fcsgw3911al09zsid6aw"; depends=[colorspace FNN ggplot2 ks pcaPP]; }; stream = derive2 { name="stream"; version="1.3-1"; sha256="09f26m0fajaw77mb6pk9qkinzkhxpghagd1qhc3nkvcki3vwlcxa"; depends=[BH clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; }; - streamDepletr = derive2 { name="streamDepletr"; version="0.1.0"; sha256="0a8cihwjr5bzw5dw07x2kisi4qycwmxpj5hhv9b4pjvfghdwq4b8"; depends=[dplyr magrittr Rmpfr]; }; streamMOA = derive2 { name="streamMOA"; version="1.2-2"; sha256="1zm7bcdsyazqksizir5rqibgw6w1bz85gdga0ncirh2s1z0dhi79"; depends=[rJava stream]; }; streamR = derive2 { name="streamR"; version="0.4.5"; sha256="1clx3b0j2515r1nmnl6ki7qw5n54q3x2jvqv3zrc00kq71mlj7ix"; depends=[ndjson RCurl rjson]; }; streambugs = derive2 { name="streambugs"; version="1.1"; sha256="1r0fnvpmj2z34j3w2nbdvxlw9jnz8y3x1xx9ih3vxna50ldrg2z2"; depends=[deSolve]; }; stressr = derive2 { name="stressr"; version="1.0.0"; sha256="00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7"; depends=[lattice latticeExtra XML xts]; }; strex = derive2 { name="strex"; version="1.2.0"; sha256="1vshbq83szgig93ljhnwqwdsdskayszdzwk85n1n650clriv0b85"; depends=[checkmate glue magrittr matrixStats ore processx Rcpp rlang stringi stringr tibble]; }; strider = derive2 { name="strider"; version="1.2"; sha256="0kfwanz80ki41yr5m0xw4nbbqgzl6zfvwqx906bxywlqiqi47cb6"; depends=[BH Rcpp]; }; - stringb = derive2 { name="stringb"; version="0.1.13"; sha256="004bp75yhrgr480v9774kfq7z5l9z0761cnrwj4yk7fxygk89a1x"; depends=[backports]; }; + stringb = derive2 { name="stringb"; version="0.1.14"; sha256="0hhqqsc3fif14dy623h6y3gxjg8lhff9wlglkygccs5iyhdjyl12"; depends=[backports]; }; stringdist = derive2 { name="stringdist"; version="0.9.5.5"; sha256="1dqfakclzaf878x7mhwmqrcpcql2h9cv19fz5f3ygpajf3si5kqi"; depends=[]; }; stringformattr = derive2 { name="stringformattr"; version="0.1.2"; sha256="0x56k30clj5ajk0qg5sr8b9l0asz6ldivwr1ddy1vp1djliih1fx"; depends=[stringr]; }; - stringi = derive2 { name="stringi"; version="1.4.5"; sha256="0gdmdf4i3ik8rcs7af1vlsfnilcmw3z28jx4278rpq2asigps89k"; depends=[]; }; + stringi = derive2 { name="stringi"; version="1.4.6"; sha256="1mkgxzf000zdgbbbvg2vf4md4l501n5lfksffq8vdg6pbgd6fgv3"; depends=[]; }; stringr = derive2 { name="stringr"; version="1.4.0"; sha256="1p9ip7p87gbbg4s6d3d392svvzz2b5dqdq2c8ilgvn4s78nlsq47"; depends=[glue magrittr stringi]; }; strip = derive2 { name="strip"; version="1.0.0"; sha256="1j3kq6w8k66z45rpd1cgxplpnldzbyqklgs4bnbv906pyd8wk9ak"; depends=[rlist]; }; stripless = derive2 { name="stripless"; version="1.0-3"; sha256="08mdp7kq6r5bk77j09477d1dnn7iwa346pr24b5bqsxwnbknyrsr"; depends=[lattice]; }; striprtf = derive2 { name="striprtf"; version="0.5.2"; sha256="1ra6aalalig6drsj26z9s24lmb10zssagqrvgqqi4358zbm8gwcd"; depends=[magrittr Rcpp stringr]; }; strucchange = derive2 { name="strucchange"; version="1.5-2"; sha256="1y022363a4pp0mnji91sjh1qiyspkh09sybqwj03r9pmwrd7q93x"; depends=[sandwich zoo]; }; - structSSI = derive2 { name="structSSI"; version="1.1.1"; sha256="06rwmrgqc4qy4x0bhlshjdsjxfmp5fr9d1wjglhlb1gbp72fmkdv"; depends=[ggplot2 igraph multtest reshape2 rjson]; }; structree = derive2 { name="structree"; version="1.1.6"; sha256="0d3ww07grprp908i3h1xaz3jw92g0g0s3gjdnb63wl10yqqsq2vj"; depends=[lme4 mgcv penalized]; }; - strum = derive2 { name="strum"; version="0.6.2"; sha256="0f5cb7cfvqhmnv4sjfr58lns4fclmr8iyka595zddy9f6dv5rqp1"; depends=[graph MASS Matrix pedigree Rcpp RcppArmadillo Rgraphviz]; }; strvalidator = derive2 { name="strvalidator"; version="2.2.0"; sha256="0pfc6bj5sdik6a3qxsxshd6n3jp27kzap3hp6zlldknwybsavrl3"; depends=[data_table ggplot2 gridExtra gtable gWidgets2 gWidgets2tcltk MASS plyr scales]; }; stsm = derive2 { name="stsm"; version="1.9"; sha256="18ypmkd7l7m7qkahb0nqf8f1m8g4irxlw48v2ms0dq1bsnhbzx7j"; depends=[KFKSDS]; }; stsm_class = derive2 { name="stsm.class"; version="1.3"; sha256="19jrja5ff31gh5k2zqhqsyd7w2ivr4s6bkliash6x8fmd22h5zs8"; depends=[]; }; stuart = derive2 { name="stuart"; version="0.8.0"; sha256="1hcb1jybra0cpibxc1k31nr6xciwd2chxjfdnir4kfzxn2bd2cxd"; depends=[]; }; stubthat = derive2 { name="stubthat"; version="1.2.1"; sha256="130naxzvswcyadwcgldvwnxxdxbfwx5vljac7901vn3ahjp75d8z"; depends=[testthat]; }; studentlife = derive2 { name="studentlife"; version="1.0.0"; sha256="1snrsaapjwvcifa91hg5xcbg7n70aqcdyyq69gg20168qg8abkws"; depends=[crayon dplyr ggplot2 jsonlite purrr R_utils readr skimr tibble tidyr visdat]; }; - styler = derive2 { name="styler"; version="1.2.0"; sha256="0rdbz60x8bymis6r6188ia1y0ip3nhf5y363i4cmakr618irjab9"; depends=[backports cli magrittr purrr rematch2 rlang rprojroot tibble withr xfun]; }; + studyStrap = derive2 { name="studyStrap"; version="1.0.0"; sha256="0lvzqnq40j0xn74qrj0pqhr8zz34mbhfd7dg8bnadscsvj5ffm4c"; depends=[caret CCA dplyr MatrixCorrelation nnls pls tibble tidyverse]; }; + styler = derive2 { name="styler"; version="1.3.2"; sha256="1waglhsy2c53qjgd2qhlzda3z0lbzbwx9fkrfhac41y6h91mgkrz"; depends=[backports cli magrittr purrr R_cache rematch2 rlang rprojroot tibble withr xfun]; }; stylest = derive2 { name="stylest"; version="0.1.0"; sha256="0dr7j9fh8kp6wsqql38s3rk596xl6m9nx0w1l5v25hv2bphidxzr"; depends=[corpus Matrix]; }; stylo = derive2 { name="stylo"; version="0.7.1"; sha256="0l7z4d8q4kp9m0di0hch2zpbxmf7im4h0n95mrylqw93w768z76s"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; }; @@ -14133,29 +14158,27 @@ in with self; { subdetect = derive2 { name="subdetect"; version="1.1"; sha256="1bcc13avs5w9vmwyf71cnjd2kwmcavmzpwyv8gvsn61n7b4j8wlk"; depends=[]; }; subformula = derive2 { name="subformula"; version="0.1.0"; sha256="0nsl0nzj79z6aib12b5qijyab0yxlljfssiq9p8xgcgbxy4a7syy"; depends=[]; }; subgroup = derive2 { name="subgroup"; version="1.1"; sha256="1n3qw7vih1rngmp4fwjbs050ngby840frj28i8x7d7aa52ha2syf"; depends=[]; }; - subgroup_discovery = derive2 { name="subgroup.discovery"; version="0.2.1"; sha256="15yvkymcig19y9h8362izap0qbv1igmd0s0yxdgv0n0l1xgfsywj"; depends=[]; }; subgxe = derive2 { name="subgxe"; version="0.9.0"; sha256="0faww87ncylqixb640hc2axvn4i50d2r2ggngmd7s9wazbb6sd55"; depends=[]; }; sublime = derive2 { name="sublime"; version="1.3"; sha256="0455fppc68azxknxjvxci4kjpcj6c1jkp9adbxqrn3qnnywaj5v2"; depends=[AnalyzeFMRI downloader oro_nifti]; }; submax = derive2 { name="submax"; version="1.1.1"; sha256="0b9x55gqzw20smr3hx9izvyr0i8zv0h03hadn4c7ks7w8ga5i0kj"; depends=[mvtnorm sensitivityfull]; }; - subniche = derive2 { name="subniche"; version="0.9.7"; sha256="1jsdcaf6d38j7c0ppjyilj0jd2dbpdldw6w4prmsbmx8mh7lplww"; depends=[ade4]; }; - subplex = derive2 { name="subplex"; version="1.5-4"; sha256="10cbgbx1bgsax5z7gz6716g360xpq4mvq19cf4qqrxv02mmwz57z"; depends=[]; }; - subprocess = derive2 { name="subprocess"; version="0.8.3"; sha256="00720hj685449vhjqm9q6rrsn5jyxnxwq3pgxpbsnrhmwa697w89"; depends=[]; }; + subniche = derive2 { name="subniche"; version="1.0"; sha256="18f2xa8nqwb85imlj4zl5b5aacs65qb89rk2jq5bff7y6gv1pswr"; depends=[ade4 polyclip siar wordcloud]; }; + subplex = derive2 { name="subplex"; version="1.6"; sha256="1yfbfjvpbhgky7vihw3f4jl41pxpqb39z4nc045d5z7z48bdl18d"; depends=[]; }; subrank = derive2 { name="subrank"; version="0.9.9.1"; sha256="19lgw7248jq6b34i17c7vw208wsvmppni7njswd02i9xdgyjn95z"; depends=[]; }; subsamp = derive2 { name="subsamp"; version="0.1.0"; sha256="1bfz2z2qy1war3id8qr1asygwvwxgf2hhlh075hr6bjdkxz0j0nd"; depends=[]; }; subscore = derive2 { name="subscore"; version="3.1"; sha256="1hb4ci62hxffz09sz0i27jfw7xn0pca87kiq6damz5zi418csa4v"; depends=[boot cocor CTT irtoys ltm sirt]; }; subscreen = derive2 { name="subscreen"; version="2.0.1"; sha256="0w1y60fzwf59ykcmk6yvdi4awqm8azpm0b288rjx1p0vzwl3i8hj"; depends=[bsplus colourpicker data_table dplyr DT jsonlite plyr randomForestSRC shiny shinyjs V8]; }; - subselect = derive2 { name="subselect"; version="0.14"; sha256="03sfnpj219a0ma92c2z953bh2y6s7w2c84lf2shnghmmxmg7jq9l"; depends=[corpcor ISwR MASS]; }; + subselect = derive2 { name="subselect"; version="0.15.2"; sha256="0ggpm5bq4ncx4302855s8x1nj0afjizmi81cg6b7xc7rvpirw0fq"; depends=[corpcor ISwR MASS]; }; subspace = derive2 { name="subspace"; version="1.0.4"; sha256="0p2j0lnwj3ym1v4xla6r97zjikb8alnibdc690xn9c0z21hmv43v"; depends=[colorspace ggvis rJava stringr]; }; subtee = derive2 { name="subtee"; version="0.3-5"; sha256="14pvfghsd17n9qkznik4vdalqfv5ykgqrhk2g33idl8chi9q7jjn"; depends=[ggplot2 MASS matrixStats survival]; }; subtype = derive2 { name="subtype"; version="1.0"; sha256="1094q46j0njkkqv09slliclp3jf8hkg4147hmisggy433xwd19xh"; depends=[penalized ROCR]; }; - suddengains = derive2 { name="suddengains"; version="0.4.0"; sha256="1606lj9x4qlkg5sm7i7xgp8bd2ivzngz0phc7bs06akwd7xbbnra"; depends=[dplyr ggplot2 ggrepel magrittr psych readr rlang stringr tibble tidyr]; }; + suddengains = derive2 { name="suddengains"; version="0.4.3"; sha256="1y6lan63q8jyyy37s4nq5kzrah63ycbwd1id7f6rb4rizb1sg0vn"; depends=[dplyr ggplot2 ggrepel magrittr psych readr rlang stringr tibble tidyr]; }; sudoku = derive2 { name="sudoku"; version="2.6"; sha256="13j7m06m38s654wn75kbbrin5nqda4faiawlsharxgrljcibcbrk"; depends=[]; }; sudokuAlt = derive2 { name="sudokuAlt"; version="0.2-1"; sha256="1y3li64xqag2ia8dg7q49jmlb1awl92rz6xa9zsbf0s9jman9wj9"; depends=[magrittr]; }; sugarbag = derive2 { name="sugarbag"; version="0.1.2"; sha256="0aikbcdnwvrwvhcchjic9x1r4xh00z8hzq7dc93ykg4wlggs5rx7"; depends=[dplyr geosphere lwgeom purrr rlang rmapshaper sf tibble tidyr]; }; - sugrrants = derive2 { name="sugrrants"; version="0.2.4"; sha256="04qfa3falpkbdnjks5vd0izjpp5pmc3wf4bkv0ha89ya556306jv"; depends=[dplyr ggplot2 gtable lubridate rlang]; }; + sugrrants = derive2 { name="sugrrants"; version="0.2.6"; sha256="125v8g36215hyil7vavdz27ng6709nh45m3zp9wwdqb6m4g36smy"; depends=[dplyr ggplot2 gtable lubridate rlang]; }; sumFREGAT = derive2 { name="sumFREGAT"; version="1.1.0"; sha256="1ycdnf5ghrv3czi4lh5yc8n8690m3b8i85s46k7lya2k0rasvac4"; depends=[GBJ Matrix seqminer]; }; - summariser = derive2 { name="summariser"; version="0.1.0"; sha256="0a6wyb0r1i0cynld002q96ylr58jz76n5jqjz8gm6a3csjn9qss7"; depends=[dplyr ggplot2 lazyeval plotrix]; }; - summarytools = derive2 { name="summarytools"; version="0.9.4"; sha256="1n695baz56mg4f13xjjadfq0xalw5xsn6xicil0yap5hgi8fsr3a"; depends=[checkmate dplyr htmltools lubridate magick matrixStats pander pryr rapportools RCurl tibble tidyr]; }; + summariser = derive2 { name="summariser"; version="2.0.0"; sha256="1srr5kmzf4mn0zsdhqhds26yarbm9pl5wyhpz2dps35cvrapp9av"; depends=[dplyr rlang]; }; + summarytools = derive2 { name="summarytools"; version="0.9.6"; sha256="03pcb2ild1rb9f15yq8b68p9bg10z5wk2x7ahgyzkwdh5f81vbq2"; depends=[base64enc checkmate dplyr htmltools lubridate magick matrixStats pander pryr rapportools tibble tidyr]; }; sunburstR = derive2 { name="sunburstR"; version="2.1.3"; sha256="1zxy1zyi8sp26vicxjh7jx167qwnmvj1h6hpyj6398cbzcx7dvy7"; depends=[d3r dplyr htmltools htmlwidgets]; }; suncalc = derive2 { name="suncalc"; version="0.5.0"; sha256="1chkl297km313m89h9mbp7vnpz188fhzz5dn8x5cjkqy0mm6c0qc"; depends=[data_table lubridate magrittr]; }; sundialr = derive2 { name="sundialr"; version="0.1.3"; sha256="1bpqfxbg187g113nzsgk5pnfw9ldg9v7x52frrw8wjjs8b3c0v8z"; depends=[Rcpp]; }; @@ -14166,21 +14189,19 @@ in with self; { superbiclust = derive2 { name="superbiclust"; version="1.1"; sha256="1gzjbzbl8y1nzdfhyd6dlrwjq8mwj43a26qav84s1bdzwx6dra48"; depends=[biclust fabia Matrix]; }; superdiag = derive2 { name="superdiag"; version="1.1"; sha256="0pa3mv74riabpm7j4587zww2364fszzlw48ijj1apcgz8y6pyqbw"; depends=[boa coda]; }; superheat = derive2 { name="superheat"; version="0.1.0"; sha256="01v8s6px1k5fajlm6py3ksr1i853kwwlky1yryzhy3p1cxhwgg83"; depends=[dplyr ggdendro ggplot2 gtable magrittr plyr scales]; }; - superml = derive2 { name="superml"; version="0.5.0"; sha256="1h5jpafriw5drkmwyyk42fn33qq9qvc19wmi13mfnpkhc67xmlyp"; depends=[assertthat data_table doParallel Metrics R6]; }; + superml = derive2 { name="superml"; version="0.5.2"; sha256="1852s89yy4nv4aq1wi2ccj1yyvc0xq43ggxgjrr0ynjbvl209b7x"; depends=[assertthat BH data_table doParallel Metrics R6 Rcpp]; }; supernova = derive2 { name="supernova"; version="2.1.1"; sha256="1vjx0mfnqksgvcgn8hfvpx8j3q8791yifdsaqjqkhc7h56r9gcc5"; depends=[magrittr stringr]; }; superpc = derive2 { name="superpc"; version="1.09"; sha256="1p3xlg2n7p57n54g2w4frfrng5vjh97kp6ax4mrgvj3pqmd1m69z"; depends=[survival]; }; supervisedPRIM = derive2 { name="supervisedPRIM"; version="2.0.0"; sha256="1j5gsy119pvrhkkg048lyk6hjvn9x1bhmfy5g824gj3k1w5slrib"; depends=[prim]; }; suppdata = derive2 { name="suppdata"; version="1.1-1"; sha256="1sysd5w59y9hkm1ab8m9i1d976dv6cxchssc86s27bsibhsj2blc"; depends=[httr jsonlite rcrossref xml2]; }; support = derive2 { name="support"; version="0.1.4"; sha256="1yahhb9l2f3129av4cj4q77q1s0nfszzd6z7dqkfpnjvvk8gzdq7"; depends=[BH MHadaptive randtoolbox Rcpp RcppArmadillo]; }; - support_BWS = derive2 { name="support.BWS"; version="0.3-0"; sha256="1mylc1jys8j56qciscy8ra4dv0ig0swh2gyf3wv5q00v85n1wf92"; depends=[]; }; + support_BWS = derive2 { name="support.BWS"; version="0.4-0"; sha256="09dd8nxfb0snsvq30z494i9pdkfl2vbhajlsxiib57h5jr0rc0ng"; depends=[]; }; support_BWS2 = derive2 { name="support.BWS2"; version="0.3-0"; sha256="0k9yvg0n4lzsq43r53r9f70hq1q3zfljjafj9ds2p3c6qzgs9chi"; depends=[]; }; support_BWS3 = derive2 { name="support.BWS3"; version="0.2-0"; sha256="012kcvscz7m2is92r71731zc7xnp7pwyx30vivwjazrigp9bq1kl"; depends=[]; }; support_CEs = derive2 { name="support.CEs"; version="0.4-1"; sha256="1rbyl7v6m07dsp08kkk9020bh39rhx89q7d05rc5kxb6f7y66jyz"; depends=[DoE_base MASS RCurl simex XML]; }; supportInt = derive2 { name="supportInt"; version="1.1"; sha256="14fh75sds05c06xkcfbijd8my3sa9kpnczzh96xx0gwj1193yya9"; depends=[ProfileLikelihood]; }; sur = derive2 { name="sur"; version="1.0.2"; sha256="13mkn153x9sgkmj2vchma5qz1zggxw5vf28v8sfbg0n77f4wjc1p"; depends=[learnr]; }; sure = derive2 { name="sure"; version="0.2.0"; sha256="0gwr2j321i2vq98rin5b1m4sl123dm1nih1ghcmj0zd1wd6x5x54"; depends=[ggplot2 goftest gridExtra]; }; - surface = derive2 { name="surface"; version="0.4-1"; sha256="0z7fh09hjmxfmqzi588gjwqqlpj1a475aixrnvy911lkx3zfk146"; depends=[ape geiger MASS ouch]; }; - suropt = derive2 { name="suropt"; version="0.1.1"; sha256="0fm3vq3d0r4ahjgdmxm06yyakngssryzvdd1w0my34m0nvk6cbq4"; depends=[DiceKriging DiceOptim dplyr emoa GenSA ggplot2 GPareto lhs mco pso purrr rgenoud tibble tidyr]; }; surrosurv = derive2 { name="surrosurv"; version="1.1.25"; sha256="05s1skjp1vzwai2nfw65ff4q2qhbj596lhfvzd1gdrbs39r90hxh"; depends=[copula eha lme4 MASS Matrix msm mvmeta optextras optimx parfm SurvCorr survival]; }; surrosurvROC = derive2 { name="surrosurvROC"; version="0.1.0"; sha256="1dpqr9dqzckgvdfrb2ndxazra0lbp6db9wbjch4vig3kyz6nyw4y"; depends=[survival]; }; surv2sampleComp = derive2 { name="surv2sampleComp"; version="1.0-5"; sha256="0pk70q33il9clz0ikzx1cypg5ygnsqp5hgk67xczzbidksjzs4dn"; depends=[flexsurv plotrix survival]; }; @@ -14195,7 +14216,7 @@ in with self; { survJamda_data = derive2 { name="survJamda.data"; version="1.0.2"; sha256="0a010v2ar48i5m0jiqjvdyqm93ckfgfmcmym9a02h0rclnizd75r"; depends=[]; }; survMisc = derive2 { name="survMisc"; version="0.5.5"; sha256="00nvvl8gz4477ab24rd0xvfksm8msv8h021b9ld5c9cizc41n2bm"; depends=[data_table ggplot2 gridExtra km_ci KMsurv knitr survival xtable zoo]; }; survParamSim = derive2 { name="survParamSim"; version="0.1.0"; sha256="11rp49wrqw9z4cy2iwm0gn92hi88a0n3jy34b29yj5f9waz0andf"; depends=[dplyr forcats ggplot2 magrittr mvtnorm purrr rlang survival tibble tidyr]; }; - survPen = derive2 { name="survPen"; version="1.2.0"; sha256="0x030p6ihw769mjwjxzprmv3nbza0564mh1zfymwn8s94v86ybkl"; depends=[statmod]; }; + survPen = derive2 { name="survPen"; version="1.3.0"; sha256="1yvsns9md9g94932q79y0icwd5xvnjx4a5fs01vxi5mfqm1drsmm"; depends=[Rcpp RcppEigen statmod]; }; survPresmooth = derive2 { name="survPresmooth"; version="1.1-10"; sha256="0m1037v857g140lypck5zq2zf52rkdxzaqlj9kjn7h7lp6gif6ia"; depends=[]; }; survRM2 = derive2 { name="survRM2"; version="1.0-2"; sha256="0pvp65c1kkbkcci4l3cvq4a5krmv58jwb9abz5225ql6jyawzlsw"; depends=[survival]; }; survRM2adapt = derive2 { name="survRM2adapt"; version="1.0-1"; sha256="1r3jvjbc2sb7b00s95b3sdx4d99rmrnd573fx1n4914ydiggi9nn"; depends=[survival]; }; @@ -14204,14 +14225,13 @@ in with self; { survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; }; survey = derive2 { name="survey"; version="3.37"; sha256="1f31dvh48gzzan13pdrwh84ls35x9116095i7mdrcbrhz809r8dy"; depends=[lattice Matrix minqa mitools numDeriv survival]; }; surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; }; - surveydata = derive2 { name="surveydata"; version="0.2.3"; sha256="0krwzfhjkkjxrpj1xzyaj400xdgbvczi86vjwx4r9g8ys90nvm09"; depends=[assertthat dplyr DT ggplot2 magrittr plyr purrr rlang scales stringr tidyr]; }; + surveydata = derive2 { name="surveydata"; version="0.2.4"; sha256="1nhpy40ibl1iirbc6np94mddsws2hn77zfqcaydfzd12i0jqg3gy"; depends=[assertthat dplyr DT ggplot2 magrittr purrr rlang scales tidyr]; }; surveyeditor = derive2 { name="surveyeditor"; version="1.0"; sha256="073219bcn1hlxl9ql6gncfvgn0m37pz5sb7h94nq6lf35dymq5zq"; depends=[]; }; surveyoutliers = derive2 { name="surveyoutliers"; version="0.1"; sha256="03nqw0zir3x57gg23hgsr2s99pv958kfsygqfwly96rvfdhr5p3v"; depends=[]; }; surveyplanning = derive2 { name="surveyplanning"; version="3.0"; sha256="1wnjizd5n5lyp8nw6srplrw7swrrivmbcphdvgaa9q1y8lkpq5w0"; depends=[data_table laeken]; }; - surveysd = derive2 { name="surveysd"; version="1.1.0"; sha256="0ab1f3z86idv3cy9nycqh4nnkcwachlm27pynlrn6g4jmcvcbj9b"; depends=[data_table dplyr ggplot2 laeken matrixStats Rcpp]; }; + surveysd = derive2 { name="surveysd"; version="1.2.0"; sha256="1w4cd52gdl65p16rza50n7pk2xfx3kxd1k16pr67j0pnyl7h2fqk"; depends=[data_table dplyr ggplot2 laeken matrixStats Rcpp]; }; survidm = derive2 { name="survidm"; version="1.2.0"; sha256="0dgcxhf8x1aavr4n4aqanfc23zd62dyk3h05sa04611h6n9l8j9c"; depends=[doParallel doRNG foreach KernSmooth np survival TPmsm]; }; - survivALL = derive2 { name="survivALL"; version="0.9.3"; sha256="0lnvs7b097sl21gvnfafdprzvh197p1q4nzzagkdf4xm1xw8pj0h"; depends=[cowplot desiR ggplot2 ggthemes survcomp survival viridis]; }; - survival = derive2 { name="survival"; version="3.1-8"; sha256="15fj4y8c107bwq22amx88r5hw7qndlcbr9sapzrpkpr7iqz3kkyf"; depends=[Matrix]; }; + survival = derive2 { name="survival"; version="3.1-11"; sha256="1fbhbm3bnpg1nmj37h1d76x813ggvwk0cp51ixmmgb3pz47i5xj4"; depends=[Matrix]; }; survivalAnalysis = derive2 { name="survivalAnalysis"; version="0.1.1"; sha256="0y4hgskc36jrriy6577bnkvg1gmxs0x3pxiv3lma38a9lj71ivwf"; depends=[cowplot dplyr forcats ggplot2 gridExtra magrittr purrr rlang scales stringr survival survminer tibble tidyr tidytidbits]; }; survivalMPL = derive2 { name="survivalMPL"; version="0.2"; sha256="05bfa9fx841kh9g2jcs1dimsxkjnf4bxgamcnjpisx3a644c1gkn"; depends=[MASS survival]; }; survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; }; @@ -14241,14 +14261,13 @@ in with self; { svd = derive2 { name="svd"; version="0.5"; sha256="18bi42pgml9i8jflfk29ws0bfblkj3f69z9p9mkd0m8kcx4d8hnh"; depends=[]; }; svdvisual = derive2 { name="svdvisual"; version="1.1"; sha256="02mzh2cy4jzb62fd4m1iyq499fzwar99p12pyanbdnmqlx206mc2"; depends=[lattice]; }; svenssonm = derive2 { name="svenssonm"; version="0.1.0"; sha256="0pvay9vfrcafaq270pq6glp2b74zdfgldksl13cwdb0wk7qx7731"; depends=[]; }; - svgPanZoom = derive2 { name="svgPanZoom"; version="0.3.3"; sha256="09gfa2943bvmjpnhnc2nr85wddkv662k30pxsqvvvq1va64rzpkc"; depends=[htmlwidgets]; }; + svgPanZoom = derive2 { name="svgPanZoom"; version="0.3.4"; sha256="1iglgwbyxf5q4716h9ba2cfmxh1qq16zwy54krnawg4580v8ydh2"; depends=[htmlwidgets]; }; svgViewR = derive2 { name="svgViewR"; version="1.4"; sha256="00nm2sdgil2kw6f19sy03m8452zia47bv1bkynxw3q7vck3vb3vx"; depends=[Rcpp rjson Rook]; }; - svglite = derive2 { name="svglite"; version="1.2.2"; sha256="1gwv51wqp6pgm2f9gavsiq65njs77fr49n8y6y9ax60k3a4vvg14"; depends=[BH gdtools Rcpp]; }; - svmadmm = derive2 { name="svmadmm"; version="0.3"; sha256="15ccda1r9cc6v30j37i052rdwxgw0wg37hwyn2vp8c7bkr0ybgkm"; depends=[kernlab]; }; + svglite = derive2 { name="svglite"; version="1.2.3"; sha256="1zivykbi1pxdxhrkc1if1ihdn5p27j0nai2q0abca1dwry3wg2yl"; depends=[BH gdtools Rcpp]; }; svmpath = derive2 { name="svmpath"; version="0.955"; sha256="02j5xs4gg8k16imnwk6aram168cv1dqdrky3bszyc98l7xd0nlrj"; depends=[]; }; svmplus = derive2 { name="svmplus"; version="1.0.1"; sha256="08cfywrbaxyacqd3l75lysb23ahqbs80959iqkjbb125aafmhvni"; depends=[MASS Matrix quadprog]; }; svrpath = derive2 { name="svrpath"; version="0.1.2"; sha256="18h40555jmqpbsnhlwkvc5fl7d0r2bgscdv8amjvhjxmx9y952a2"; depends=[quadprog svmpath]; }; - svs = derive2 { name="svs"; version="1.1.0"; sha256="0575msaxg04ck76mbr815m29y895qvg8b9qg4y0ggv6b1lvwp5p6"; depends=[gtools]; }; + svs = derive2 { name="svs"; version="2.0.0"; sha256="1kcrdgg0pw5ypjgl59wn66c3ipinamcnd4752hjnfrf62pkc6fgw"; depends=[gtools Matrix]; }; svyPVpack = derive2 { name="svyPVpack"; version="0.1-1"; sha256="15k5ziy2ng853jxl66wjr27lzc90l6i5qr08q8xgcs359vn02pmp"; depends=[survey]; }; svydiags = derive2 { name="svydiags"; version="0.3"; sha256="0xgizswdqs8cjac200sqv3ygvrnbcy74h92kgx4r6nv1fhlcljl3"; depends=[MASS Matrix survey]; }; swCRTdesign = derive2 { name="swCRTdesign"; version="3.1"; sha256="18ln02fnxkpjqi8a36wr2qr427hxrghkhfjx0384grmdg1mmkbf5"; depends=[]; }; @@ -14261,7 +14280,7 @@ in with self; { sweep = derive2 { name="sweep"; version="0.2.2"; sha256="12mbkkinvv11s96bn61vww79xjivjshhg9m3lmza5y0512zm89k5"; depends=[broom dplyr forecast lazyeval lubridate tibble tidyr timetk]; }; sweidnumbr = derive2 { name="sweidnumbr"; version="1.4.1"; sha256="014zbp6a66gv7b0f2gmzvifllz266zrc14ihawksvyp1mcxz2ipg"; depends=[lubridate stringr]; }; swephR = derive2 { name="swephR"; version="0.3.0"; sha256="0fk5wih3i5vpkcc9y1n30xwc1hyqgfgnad9jkdgdx0m31pn1y9j5"; depends=[Rcpp]; }; - swfscMisc = derive2 { name="swfscMisc"; version="1.2"; sha256="08p2crsx8zi6qprs14mhdyq9x5sjlp3a46c1zzvp6741an4fy640"; depends=[ggplot2 mapdata maps reshape2 spatstat]; }; + swfscMisc = derive2 { name="swfscMisc"; version="1.3"; sha256="03wzjricpgf55yfwmj4vjcvz59yxcipfp4bsjddzw65glasa9d1s"; depends=[dplyr ggplot2 ggrepel magrittr mapdata maps reshape2 rlang spatstat tibble tidyr]; }; swgee = derive2 { name="swgee"; version="1.4"; sha256="1a6zr4nkpj52b0rk01qbwzi8y0c798wlxzw69wyyv576k148rgfq"; depends=[gee geepack mvtnorm]; }; swirl = derive2 { name="swirl"; version="2.4.5"; sha256="0cqyn2rnqfkb2wza4zdr1kcms5l0igbq79xh5i7765agdday2z9w"; depends=[digest httr RCurl stringr testthat yaml]; }; swirlify = derive2 { name="swirlify"; version="0.5.3"; sha256="1bpg6yz2adgspjlwsf2q83j1bq0iyvp9938smgc41861nsclngwr"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; }; @@ -14270,12 +14289,12 @@ in with self; { swissparl = derive2 { name="swissparl"; version="0.2.0"; sha256="1blpaj8mbhnyb4bajh9h91h7pc2zz8gmzdag5faqfqr4rfnk0582"; depends=[crayon dplyr ggplot2 httr jsonlite lubridate magrittr purrr stringr tibble tidyr]; }; switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; }; switchr = derive2 { name="switchr"; version="0.14.2"; sha256="1a1yq12h5km42gp7gki7p215rnbwrs87xa2p0qndwqpvnaxgv6a4"; depends=[RCurl RJSONIO]; }; - swmmr = derive2 { name="swmmr"; version="0.9.0"; sha256="1iv9dmgpjfl7yzjlph42bamnwchjdic6n0lgs33z0incvgsv3m3g"; depends=[dplyr purrr Rcpp readr tibble tidyr xts zoo]; }; + swmmr = derive2 { name="swmmr"; version="0.9.1"; sha256="140sx0y00ngxsyn7n1l0aay7vk2jk8hf81aiwh46k761cpc5y28d"; depends=[dplyr purrr Rcpp readr tibble tidyr xts zoo]; }; sybil = derive2 { name="sybil"; version="2.1.5"; sha256="1biy1cc87g7adfglzp2mq6ca5sfp1ljq087id0xqdmrwz0650maq"; depends=[lattice Matrix]; }; sybilDynFBA = derive2 { name="sybilDynFBA"; version="1.0.1"; sha256="1zyhvlzkcwnq3sh6gvi0v1crq94mr16bc5jnh0g9c8rbdl4v8r4x"; depends=[sybil]; }; sybilccFBA = derive2 { name="sybilccFBA"; version="3.0.1"; sha256="1y94d6ajf0l492nrd8wsz3b6x724zcyhipasgyx65nx3sgha6yp8"; depends=[Matrix sybil]; }; sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="2.0.1"; sha256="0j1qmf5apb6k0ga5ki7wxbbq1k8x7kv8wcnf85zcx0117fjkxfng"; depends=[MASS Matrix sybil]; }; - sylcount = derive2 { name="sylcount"; version="0.2-1"; sha256="0a5762cy2h4vhy35z88l9i4ny30zpj5bvmmw3n5xzz275hsd3piw"; depends=[]; }; + sylcount = derive2 { name="sylcount"; version="0.2-2"; sha256="0cncj0nszfw98i94sb3sqdzdxdqjs523kmbqxz6cvvph1s77aama"; depends=[]; }; syllabifyr = derive2 { name="syllabifyr"; version="0.1.0"; sha256="1pd5zjgcmpxg7xqhcljxck80pjs84ihhkr5bl4i8h2mc6xqmy1kf"; depends=[dplyr purrr stringr tibble tidyr]; }; sylly = derive2 { name="sylly"; version="0.1-5"; sha256="01c7mpsk32kcsjyzzv52bn8bj28lqbmyhhfa1cwhphva5c5nkqwx"; depends=[]; }; sylly_en = derive2 { name="sylly.en"; version="0.1-3"; sha256="0jw48qin172vv7skcpvcpi9wzgav5l9afzb09hhgcxvivbz6dl93"; depends=[sylly]; }; @@ -14283,16 +14302,14 @@ in with self; { symDMatrix = derive2 { name="symDMatrix"; version="2.0.2"; sha256="1lf0yhid47107c2vnr4g7xz4hrjb2cgr5zpgik4xf5gypli6xh6x"; depends=[bit ff LinkedMatrix]; }; symbolicDA = derive2 { name="symbolicDA"; version="0.6-2"; sha256="0fd36dndzs0n0xwz38px5182gc6ng174n433rgch1s1g6bh8dn4s"; depends=[ade4 cluster clusterSim e1071 rgl RSDA shapes XML]; }; symbols = derive2 { name="symbols"; version="1.1"; sha256="1234rx3divhg60p0h0zn11viqn51fm6b8876m6rip2i6z8vrg319"; depends=[shape]; }; - symmetry = derive2 { name="symmetry"; version="0.1.1"; sha256="1f4l058sdrdg7jl1rklyd0a3ik9lnnsf2imgaymr56iaxn7y0m79"; depends=[Rcpp RcppArmadillo Rdpack]; }; - symmoments = derive2 { name="symmoments"; version="1.2"; sha256="074k0285c0yri39zags420kjls6kjlvlhymg3r7y24h42zdy82d4"; depends=[combinat cubature multipol mvtnorm]; }; + symmetry = derive2 { name="symmetry"; version="0.2.1"; sha256="041vxbva5kaywpn4y7kjwlc2cj56iyvd51iv5198dv280jfcnjv9"; depends=[Rcpp RcppArmadillo Rdpack]; }; + symmoments = derive2 { name="symmoments"; version="1.2.1"; sha256="0wl68nsvydfhlbyaj54alj31dphqigyp1s4h2xdapxj4zvwf2sws"; depends=[combinat cubature multipol mvtnorm]; }; syn = derive2 { name="syn"; version="0.1.0"; sha256="12apdjbsazwfxizsw4dj0y3vkdjmki8dzpyv3bi9gnhpysdd1jzx"; depends=[]; }; synRNASeqNet = derive2 { name="synRNASeqNet"; version="1.0"; sha256="05ncwbv8kvvhqqrxa8qq7s0jc6krs5a56ph04z50iwgd91rzyi7x"; depends=[GenKern igraph KernSmooth parmigene]; }; - synbreed = derive2 { name="synbreed"; version="0.12-9"; sha256="0h85z9bhzgsr783qx3zjqyi461a0q52wbqifwm3gc1kapl5irxhd"; depends=[abind BGLR doBy doParallel foreach igraph lattice LDheatmap MASS qtl regress]; }; - synbreedData = derive2 { name="synbreedData"; version="1.5"; sha256="16wv9r7p0n8726qv0jlizmkvnrqwjj1q4xaxvfmj9611rm47vckx"; depends=[]; }; synchronicity = derive2 { name="synchronicity"; version="1.3.5"; sha256="1kgsk64aifjm3mfj102y3va7x1abypq2zi0cqbnjhl8fqyzp69hx"; depends=[BH bigmemory_sri Rcpp uuid]; }; synchrony = derive2 { name="synchrony"; version="0.3.8"; sha256="1zpxg4dkxnvafiyp0j00wig5ymj10bzfg2376x56rzpnabhg57hi"; depends=[]; }; synlik = derive2 { name="synlik"; version="0.1.2"; sha256="1pscfqg5x7wpq3vp1i7fy29dwa7cw5g3kzxinanwrwbcznv9nyms"; depends=[Matrix Rcpp RcppArmadillo]; }; - synoptReg = derive2 { name="synoptReg"; version="0.2.2"; sha256="0s3m7basw71gliy22c599ysj5s068ki20i8031yrrbdhif8zhbqg"; depends=[ncdf4 raster zoo]; }; + synoptReg = derive2 { name="synoptReg"; version="1.0.0"; sha256="04bylk31pjraygh1rwa6sa9ahswwkcyzr90l52af2s1i5dlcwviv"; depends=[dplyr ggplot2 lubridate magrittr metR raster RNCEP stringr tibble tidyr]; }; syntaxr = derive2 { name="syntaxr"; version="0.8.0"; sha256="1iik9b3x9jx7w31j7hyi3sixg30l5a6w40svhqj1xlchsk60yykn"; depends=[magrittr]; }; synthACS = derive2 { name="synthACS"; version="1.5.3"; sha256="1fpaqjxyrgmzsxpd2wqpabpzj6fsp88wac0kaf21nc9k5b8lf0gk"; depends=[acs data_table Rcpp]; }; synthpop = derive2 { name="synthpop"; version="1.5-1"; sha256="0cd9g0aa4598l3gyqpywalmkmvibhqkxhkm2qkln11rkwv12lcyv"; depends=[classInt foreign ggplot2 lattice MASS mipfp nnet party plyr polspline proto randomForest rpart]; }; @@ -14316,13 +14333,12 @@ in with self; { table1xls = derive2 { name="table1xls"; version="0.4.0"; sha256="0ixbshbp9hkcg12hj32vgb5bp0pj4rbc3i6g1xdg2zhqp7zanics"; depends=[XLConnect]; }; tableHTML = derive2 { name="tableHTML"; version="2.0.0"; sha256="19sa5sda4v5dr449ip9z9ah5hdph9q6vb6zbs93jn4rpkvyijny3"; depends=[htmltools jpeg magrittr png shiny webshot]; }; tableMatrix = derive2 { name="tableMatrix"; version="0.82.0"; sha256="1sskijhbqakamrk2rv7v5zpjsdi8jw0jl2z96l0vhsvsiq0cz1c8"; depends=[data_table]; }; - tableone = derive2 { name="tableone"; version="0.10.0"; sha256="166amb76acrw3dgvllc46kgblp82f46zvlgig2prg92xnid1zaws"; depends=[e1071 gmodels labelled lmerTest MASS nlme survey zoo]; }; + tableone = derive2 { name="tableone"; version="0.11.1"; sha256="15cpi3255234hc51jcvjijx3yiq086ggbj087bh5hw227gzc3sw9"; depends=[e1071 gmodels labelled lmerTest MASS nlme survey zoo]; }; tableplot = derive2 { name="tableplot"; version="0.3-5"; sha256="1jkkl2jw7lwm5zkx2yaiwnq1s3li81vidjkyl393g1aqm9jf129l"; depends=[]; }; tablerDash = derive2 { name="tablerDash"; version="0.1.0"; sha256="1mnp6lxa7d669r325aynq1n3f35r9sy4v1fvdh4cymbf33s8mkmm"; depends=[htmltools knitr shiny]; }; tables = derive2 { name="tables"; version="0.8.8"; sha256="1cgfwrnmgi1jhv9kj918mv0ib75hvprqjg0nb7ppih73kqpaw5m2"; depends=[Hmisc knitr]; }; - tableschema_r = derive2 { name="tableschema.r"; version="1.1.0"; sha256="0ny683p9kaidj5bayz77hyvsaqg3jk87pb95271znk8hzhl2jlcj"; depends=[config future httr iterators jsonlite jsonvalidate lubridate purrr R6 RCurl rlist stringr urltools]; }; - tabplot = derive2 { name="tabplot"; version="1.3-3"; sha256="0gv27igixcy5vqrk71ckyhlk4yhcprm8r2a2l0lgmn4rbsm20c6h"; depends=[bit ff ffbase]; }; - tabr = derive2 { name="tabr"; version="0.4.0"; sha256="08f9v7mk9b9x2nk8n3nqgwikkay6ip14awljvgjl30nifbbswxsv"; depends=[crayon dplyr ggplot2 magrittr purrr tibble tidyr]; }; + tableschema_r = derive2 { name="tableschema.r"; version="1.1.1"; sha256="14cnbijxdhf7qbsiqbk8p516mfh9bgdbcg32vn5pycsp30k78b2h"; depends=[config future httr iterators jsonlite jsonvalidate lubridate purrr R6 RCurl rlist stringr urltools]; }; + tabr = derive2 { name="tabr"; version="0.4.2"; sha256="0c3814dnz1vzgbmm3vp0icnzyaqs1kimqnsp4n8id7zn8vlmp21p"; depends=[crayon dplyr ggplot2 magrittr purrr tibble tidyr]; }; tabuSearch = derive2 { name="tabuSearch"; version="1.1.1"; sha256="0396a8hla508na1hmyyhfbl8w10dbg810cln2xyhhvxi7rr223dj"; depends=[]; }; tabula = derive2 { name="tabula"; version="1.5.0"; sha256="0ijamh5lhgaa202ka1kp78i583616rc9w4zay8gx7c3gkjppfpdx"; depends=[arkhe ca ggplot2 rlang]; }; tabularaster = derive2 { name="tabularaster"; version="0.5.0"; sha256="0cqax6hq0pbxmqls3cs21cc86662wdzjyx4lkxw42dbw4v13f728"; depends=[dplyr fasterize gibble magrittr raster rlang sp spatstat spbabel spex tibble viridis]; }; @@ -14348,12 +14364,13 @@ in with self; { tauturri = derive2 { name="tauturri"; version="0.3.0"; sha256="014301f5mzy6vblqzb61bxjv46kdynmmrxjpxyvk01w1k8wkwfcn"; depends=[httr magrittr plyr purrr tibble]; }; tawny = derive2 { name="tawny"; version="2.1.7"; sha256="1b2v0cgkmhzxy36dcdn6hnbqk6l5ac5c3myvwryf7wlp19xi786d"; depends=[futile_logger futile_matrix lambda_r lambda_tools PerformanceAnalytics quantmod tawny_types xts zoo]; }; tawny_types = derive2 { name="tawny.types"; version="1.1.5"; sha256="1vg0hv91dif6cfqfzrf7m1qbk57fp8v97fp88whwmvs83yd521hq"; depends=[futile_logger futile_options lambda_r lambda_tools quantmod xts zoo]; }; - taxa = derive2 { name="taxa"; version="0.3.2"; sha256="1kiffyfpgapap6m2k3wx7p89kzpdyk48nwbmqvfa883kvg0ddzcy"; depends=[crayon dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr taxize tibble tidyr]; }; - taxize = derive2 { name="taxize"; version="0.9.91"; sha256="0ncglmj0nzk60dvmngzskr2psn0bi2wj8jr628kczln2qz2hagff"; depends=[ape bold cli crayon crul data_table foreach jsonlite natserv phangorn plyr R6 reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2 zoo]; }; + taxa = derive2 { name="taxa"; version="0.3.3"; sha256="11x28mxpza0cckj9cf4zizrsz87h48vlxxan8kn8lwzdpy1xn8j8"; depends=[crayon dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr taxize tibble tidyr]; }; + taxadb = derive2 { name="taxadb"; version="0.1.0"; sha256="0nns9jpjawla90f12gi90562llb2j0pdhwlvy62mgcg0ghr39fgr"; depends=[arkdb curl DBI dbplyr dplyr jsonlite magrittr memoise progress rappdirs readr rlang RSQLite stringi tibble]; }; + taxize = derive2 { name="taxize"; version="0.9.92"; sha256="0wbg3ycvwzzvnnqjn7i25n7h0jbxgg9m6swys5968v8bhs5dw2bl"; depends=[ape bold cli crayon crul data_table foreach jsonlite natserv phangorn R6 ritis rotl rredlist tibble wikitaxa worrms xml2 zoo]; }; taxizedb = derive2 { name="taxizedb"; version="0.1.4"; sha256="15gj9i18ysd83v9fidrrvw938dah04i10ahi3wh5dgjs5fd5ch2s"; depends=[curl DBI dbplyr dplyr hoardr magrittr RMySQL RPostgreSQL RSQLite]; }; taxlist = derive2 { name="taxlist"; version="0.1.7"; sha256="0a91hdw3n46p851662lx82znbw9hf9akg8mm4yslllwffrkhdn8g"; depends=[foreign stringdist taxa taxize vegdata]; }; taxonomizr = derive2 { name="taxonomizr"; version="0.5.3"; sha256="0hxvcbyr5b3sxqy5kw1q17qx7c2q90a6x79r9bmjn6c2lnrqn83i"; depends=[data_table R_utils RSQLite]; }; - taxotools = derive2 { name="taxotools"; version="0.0.35"; sha256="10rf071sarr94q5g174y97sl9qjlla7jgn4hplllv6s1wh10ag7c"; depends=[plyr sqldf taxize wikitaxa]; }; + taxotools = derive2 { name="taxotools"; version="0.0.43"; sha256="0msaqkvyhb292bsv84bw55xxmxhs5nyk31ikjz229q3xhv0zmnzw"; depends=[plyr sqldf taxize wikitaxa]; }; tbart = derive2 { name="tbart"; version="1.0"; sha256="0m8l9ic7na70il6r9ha0pyrjwznbgjq7gk5xwa5k9px4ysws29k5"; depends=[Rcpp sp]; }; tbd = derive2 { name="tbd"; version="0.1.0"; sha256="1wmfy3p82gckhfsslxzapryfygmircii7x24j6ysfyx52gy8iwf5"; depends=[numDeriv]; }; tbdiag = derive2 { name="tbdiag"; version="0.1"; sha256="1wr2whgdk84426hb2pf8iiyradh9c61gyazvcrnbkgx2injkz65q"; depends=[]; }; @@ -14372,19 +14389,18 @@ in with self; { tdr = derive2 { name="tdr"; version="0.13"; sha256="0i0hnb3fc4d1mbbxcpzmyfh1w2rahfjabg5iyxym3yjd6377al15"; depends=[ggplot2 lattice RColorBrewer]; }; tdsc = derive2 { name="tdsc"; version="1.0.3"; sha256="1h46cflxj27i9bkl7iqxn7kzccl9b8r3fa9f5ska3a9p57algfyv"; depends=[data_table moments]; }; tdthap = derive2 { name="tdthap"; version="1.1-11"; sha256="15qlj2bivvz3pizd8dq34wczbkbxhzqh3cqp1ixkdkprlyvcxj5k"; depends=[]; }; - tea = derive2 { name="tea"; version="1.0"; sha256="03wxhbgx17hl9bbzbfjmfa30q4fqszhs5y9imbp768fmzwbppn24"; depends=[eva]; }; teachingApps = derive2 { name="teachingApps"; version="1.0.4"; sha256="0wi25wdpkz7kh8r1s42wa9kiky8ilmcg8kgw0j1caygwg0bml2fa"; depends=[actuar BH d3heatmap data_table devtools diagram DiagrammeR dplyr DT dygraphs ggplot2 knitr leaflet magrittr markdown metricsgraphics miniUI networkD3 pacman plotly radarchart Rcpp RcppEigen RcppNumerical rprojroot scales shiny shinyAce shinydashboard shinythemes threejs tidyr visNetwork yaml]; }; tealeaves = derive2 { name="tealeaves"; version="1.0.0"; sha256="0hzih93h8c9gqvsmfaldq9jaw8hgvd4kmrlqlaqr6xhi6zhjqhf1"; depends=[crayon dplyr furrr future ggplot2 glue magrittr purrr rlang stringr tidyr units]; }; teamcolors = derive2 { name="teamcolors"; version="0.0.4"; sha256="0mqrjnkpxzv7armgbl9nwz42pjb9l94yml5lp41rhjj9414b2729"; depends=[dplyr ggplot2 tibble tidyr]; }; teamr = derive2 { name="teamr"; version="0.0.1"; sha256="01gngws8lf093598wlzrv4ls74avsli6ij33v1plqgc0znyaw4s2"; depends=[httr jsonlite R6]; }; teda = derive2 { name="teda"; version="0.1.1"; sha256="0yx469jbkw9cgx73zi5mkykrdn16kn01zh524x9411314aa32avx"; depends=[]; }; teigen = derive2 { name="teigen"; version="2.2.2"; sha256="1k5k3lj6av5pyx130w1j7avd0jdmm12ryc71mi5mq49sp95ndl4v"; depends=[]; }; - telefit = derive2 { name="telefit"; version="1.0.2"; sha256="0z4dg0am0b6h20vbjzggw2jyzmi0mf9hvj48f883wkg2p7m6d67m"; depends=[abind coda cowplot doRNG dplyr fields foreach ggplot2 gtable itertools mvtnorm raster Rcpp RcppArmadillo RcppEigen reshape2 scales scoringRules SDMTools sp stringr]; }; + telefit = derive2 { name="telefit"; version="1.0.3"; sha256="0z6dr4ni00dyagbkzr3c7l4h2g23w3bfj99a9755vmrzyy6r45iq"; depends=[abind coda cowplot dplyr fields foreach ggplot2 gtable itertools mvtnorm raster Rcpp RcppArmadillo RcppEigen reshape2 scales scoringRules sp stringr]; }; telegram = derive2 { name="telegram"; version="0.6.0"; sha256="02wwa115f0vz2d9y4nf01397hjkpc3cv2gdl47snrajrm41gji7y"; depends=[curl httr jsonlite R6]; }; telegram_bot = derive2 { name="telegram.bot"; version="2.4.0"; sha256="1bvfnr6k0zxdawrf63yh8wj9hcgq1xvy791xbqhiy0isaa86yfw9"; depends=[curl httr jsonlite R6]; }; tempR = derive2 { name="tempR"; version="0.9.9.16"; sha256="0kwrjpfij36dl98j5x09hp7bzf5v17zxdjzqhjd2sn3xsdf0z5a1"; depends=[]; }; tempcyclesdata = derive2 { name="tempcyclesdata"; version="1.0.1"; sha256="0hciachv59kjpjs119r4z24jskzgnassi1yjg3cgl2r0hyglxxc3"; depends=[]; }; - tempdisagg = derive2 { name="tempdisagg"; version="0.25.0"; sha256="0zi11jqb3i5kd2z1bbkz8y7g16kmkcn3xpkwj2brv0s86wxwsny7"; depends=[]; }; + tempdisagg = derive2 { name="tempdisagg"; version="1.0"; sha256="1n1ng7xki4syy305gsclz7wrqb48vkjw3la0vxs975apv1mc4pzr"; depends=[]; }; temperatureresponse = derive2 { name="temperatureresponse"; version="0.2"; sha256="1id3wjzfs132hj8cm7gpf105qaay9dff07ixah9rmn5sk6si0zmq"; depends=[AICcmodavg broom dplyr minpack_lm numDeriv rootSolve]; }; templates = derive2 { name="templates"; version="0.3.0"; sha256="0xnzj3cvhw1r7zfqaijbfdyclka61jwixcdh05a5z9qwgv0076sh"; depends=[dat magrittr stringr]; }; tempoR = derive2 { name="tempoR"; version="1.0.4.4"; sha256="0gn16j496833pvbjaf6wx26z9ilwssjp947mcyk6n2jb33x93rr2"; depends=[doParallel foreach pls]; }; @@ -14392,36 +14408,37 @@ in with self; { tensor = derive2 { name="tensor"; version="1.5"; sha256="19mfsgr6vz4lgwidm80i4yw0y1dr3n8i6qz7g4n2xa0k74zc5pp1"; depends=[]; }; tensorA = derive2 { name="tensorA"; version="0.36.1"; sha256="176hjy3bvg3in62r97wxbhq187sjz6c1gwy9x6spaxl6k4my3zy7"; depends=[]; }; tensorBF = derive2 { name="tensorBF"; version="1.0.2"; sha256="1dw1a6xqcsl4isbzbfiplgqq5nak5n9ffzm23mzzmkh1r1a8kl1y"; depends=[tensor]; }; - tensorBSS = derive2 { name="tensorBSS"; version="0.3.5"; sha256="1m4g9jr2s37xys2q4gv6rqknrznd4nrppa7qrgygqywwlmnyid44"; depends=[ggplot2 ICtest JADE Rcpp RcppArmadillo tensor tsBSS]; }; + tensorBSS = derive2 { name="tensorBSS"; version="0.3.6"; sha256="1ja4h5x1i4rqgq9k15zjy524ki2z2636fg0jcp352jzj87wl3443"; depends=[ggplot2 ICtest JADE Rcpp RcppArmadillo tensor tsBSS]; }; tensorflow = derive2 { name="tensorflow"; version="2.0.0"; sha256="1cz0l6blr8wan47lslq4lx0aafk61gjxwm6b3nn8zwgx849nqyr4"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; tensorr = derive2 { name="tensorr"; version="0.1.1"; sha256="18xdvp328h96jn8y1iayxh7cyz2s8j5nn43nq18pyaxq271hkfyh"; depends=[assertive_base assertive_properties assertive_types Matrix purrr]; }; - tensorregress = derive2 { name="tensorregress"; version="1.0"; sha256="0gx2skh175gs2cmihqaklwadnp777xcfimd66w3wh18qiz66ggaz"; depends=[MASS pracma rTensor speedglm]; }; + tensorregress = derive2 { name="tensorregress"; version="2.0"; sha256="0whw57rj2jfh4wh30lv7n05ddymzsnxv6137f03s8aa9dh89fiqy"; depends=[MASS pracma speedglm]; }; tensorsparse = derive2 { name="tensorsparse"; version="1.0"; sha256="1qy6s58nkqq4spg7sapq3jafmxda0mx0j0cqjaj9pd34qqxifglf"; depends=[clues fields glasso glmnet HDCI mvtnorm RColorBrewer reshape rgl rTensor viridis]; }; tensr = derive2 { name="tensr"; version="1.0.1"; sha256="1z6b3ra7fgn88mxbhsq65x3frj5j7p17n119s9kbw7sg9y633vfx"; depends=[assertthat]; }; tergm = derive2 { name="tergm"; version="3.6.1"; sha256="03yd4l317airz84jfjyczjx43wi6sraid58lmxivm29xjk52xpi1"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; }; + tergmLite = derive2 { name="tergmLite"; version="2.1.7"; sha256="0djf7k0svdq4bnc84zxmxjns2fqggf0bs4h59jcl0yc36ka9k94n"; depends=[ergm network Rcpp statnet_common tergm]; }; term = derive2 { name="term"; version="0.1.0"; sha256="16nphv6kysjjd523ypwdsw6f7l4zvqa6z62012lv71wdkhkfvgnr"; depends=[chk lifecycle]; }; ternvis = derive2 { name="ternvis"; version="1.2"; sha256="057i6i3ygxrin0npc18gsg3dpdldzafyb5sr6lix5mhy6b09lkxf"; depends=[dichromat maps quadprog]; }; tesseract = derive2 { name="tesseract"; version="4.1"; sha256="1a7cf48n7hdd6inqz23ifqhq6kx6wxri34a79ns2vxaj6f4llxf0"; depends=[curl digest pdftools rappdirs Rcpp]; }; test2norm = derive2 { name="test2norm"; version="0.1.1"; sha256="11by5a1j6613akxj1nc16r07jfwxr1izkpvymr9yycnddiqyp42c"; depends=[mfp]; }; testDriveR = derive2 { name="testDriveR"; version="0.5.1"; sha256="0wjdqvsyv33fsg1lljp9m0bhz38mpfgpgickgj4zdspc9x6lbnv6"; depends=[]; }; testassay = derive2 { name="testassay"; version="0.1.0"; sha256="06gks3k04m45kn946i525261v33ymwxpvgdy84kc7sp01xxx4rfv"; depends=[]; }; + testcorr = derive2 { name="testcorr"; version="0.1.2"; sha256="0vwbmvhdmimwhn9gyki5khsvk2yw9ik9kjgxhbr4vy3mm3ly4zqb"; depends=[assertthat forcats ggplot2 knitr reshape2 scales]; }; testequavar = derive2 { name="testequavar"; version="0.1.2"; sha256="12qfy53rkrasxphcfmch5bmdlvlybd27jfg3azsi3fg4zk4qgdw2"; depends=[]; }; tester = derive2 { name="tester"; version="0.1.7"; sha256="1x5m43abk3x3fvb2yrb1xwa7rb4jxl8wjrnkyd899ii1kh8lbimr"; depends=[]; }; testextra = derive2 { name="testextra"; version="0.1.0.1"; sha256="166lg012hgk5n4zp92dagx01bjhpkjgc5i40x9fc9nfjby0wrc0s"; depends=[assertthat parsetools pkgcond postlogic purrr rlang stringi testthat]; }; testforDEP = derive2 { name="testforDEP"; version="0.2.0"; sha256="1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9"; depends=[Hmisc minerva Rcpp]; }; testit = derive2 { name="testit"; version="0.11"; sha256="13iq4p8xzng88miizf04yv6z8vk7zhg1c8kd2h6swcmhqzq29yqj"; depends=[]; }; - testthat = derive2 { name="testthat"; version="2.3.1"; sha256="0m8xchdpgn9iwj6gb2qw46zr85v9zf1gkbr9nnahmy5sp1s9bbky"; depends=[cli crayon digest ellipsis evaluate magrittr pkgload praise R6 rlang withr]; }; + testthat = derive2 { name="testthat"; version="2.3.2"; sha256="0v70v2fs0f2ir962z9csbjlj8snrq9mbjfyhhb9dhz3zy26qs9hs"; depends=[cli crayon digest ellipsis evaluate magrittr pkgload praise R6 rlang withr]; }; testthis = derive2 { name="testthis"; version="1.1.0"; sha256="1ci7q25f8lq7mvigdj48gvpi75j08s0kll72kwa88xyfx9q8m3yl"; depends=[assertthat devtools fs magrittr pkgload rprojroot stringi testthat usethis]; }; tetraclasse = derive2 { name="tetraclasse"; version="0.1.21"; sha256="1cl2cah0xi6x3rvvdy56iszai6rkbxc1w3x13v0l1z1nryff7c6a"; depends=[dplyr FactoMineR ggplot2 ggrepel magrittr reshape2 tibble tidyr]; }; - texPreview = derive2 { name="texPreview"; version="1.4.3"; sha256="19qnfjdbm6iakbls4hyrjscl7m7dc7z0fhimf71gwdbq3nqx2zl1"; depends=[base64enc fs htmltools knitr lifecycle magick magrittr rematch2 rstudioapi svgPanZoom whisker xml2]; }; - texmex = derive2 { name="texmex"; version="2.4.2"; sha256="01qx4f5f0gf0xz85lzxxv79fp7syd7x484iw711rbnv0nw3aqwa2"; depends=[ggplot2 mvtnorm Rcpp]; }; + texPreview = derive2 { name="texPreview"; version="1.4.4"; sha256="1a80ld5j7419nqxvg1nq0kiv7ls262n6bk6pkj3cyqjq6z2y01j0"; depends=[base64enc details fs htmltools knitr lifecycle magick magrittr rematch2 rstudioapi svgPanZoom whisker xml2]; }; texreg = derive2 { name="texreg"; version="1.36.23"; sha256="0yxaqimd7cyfrfpia6fnqm15lgs0bf5zyjzmnfm1v4qmf8kj8x6v"; depends=[]; }; - text2speech = derive2 { name="text2speech"; version="0.2.9"; sha256="1gcyrq3faq3zsfr7bvwhqk1l93289gzx70bg6xdyagw99jz5k5wn"; depends=[aws_signature dplyr googleAuthR googleLanguageR httr knitr magrittr mscstts tuneR]; }; - text2vec = derive2 { name="text2vec"; version="0.5.1"; sha256="0vcp50mgpgxbf534vd8l56m8006i3sh8a4v9nrf9vxkq2pv7xygc"; depends=[data_table digest foreach futile_logger irlba Matrix mlapi R6 Rcpp RcppParallel sparsepp stringi]; }; + text2speech = derive2 { name="text2speech"; version="0.2.10"; sha256="08sg17avqdb7wl68hc6caljwsv4wziw7w0csc8ga4k7bh7r53h8l"; depends=[aws_signature dplyr googleAuthR googleLanguageR httr knitr magrittr mscstts tuneR]; }; + text2vec = derive2 { name="text2vec"; version="0.6"; sha256="0r75cv77x2zm1z66s95hic71dpbqmybz39n48q6mz7gfd3m7312y"; depends=[data_table digest lgr Matrix mlapi R6 Rcpp rsparse stringi]; }; textTinyR = derive2 { name="textTinyR"; version="1.1.3"; sha256="0z9k978yk54zxrrjajcb0nanfhfpxm2bq2vbmk6w5s194da6y3xl"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; textcat = derive2 { name="textcat"; version="1.0-6"; sha256="0639b1qbi8779lskk5ms0sbbnmy2s73b3w96abbr70mrh0s2f9rw"; depends=[slam tau]; }; textclean = derive2 { name="textclean"; version="0.9.3"; sha256="0kgjh6c4f14qkjc4fds7q7rpf4nkma3p0igm54fplmm3p853nvrz"; depends=[data_table english glue lexicon mgsub qdapRegex stringi textshape]; }; - textdata = derive2 { name="textdata"; version="0.3.0"; sha256="0khf3j9hwl5jz3mzwzsmisrqchlf19phl4r3x8sk2cdhkb1qf3ix"; depends=[fs rappdirs readr tibble]; }; + textdata = derive2 { name="textdata"; version="0.4.0"; sha256="0admyznyy02rxn3r0n1icyslfv4qky2b7mwzmc0g0251awnnx55a"; depends=[fs rappdirs readr tibble]; }; texteffect = derive2 { name="texteffect"; version="0.3"; sha256="1qcbr18h3vakh6ymw4axzqcqrpss6z68a592xl879b82l2nlq8a7"; depends=[boot ggplot2 MASS]; }; textfeatures = derive2 { name="textfeatures"; version="0.3.3"; sha256="0x67kms7ipsadymc9jwja7wymav8y9kc5sbmp2vw4n4l89n32raa"; depends=[dplyr purrr rlang text2vec tfse tibble tokenizers]; }; textgRid = derive2 { name="textgRid"; version="1.0.1"; sha256="1wi5vq5f7ixhz39l5hqi2jlmjjacx4lyrs4h8xfbd47pj6g16lc6"; depends=[]; }; @@ -14432,7 +14449,7 @@ in with self; { textometry = derive2 { name="textometry"; version="0.1.4"; sha256="17k3v9r5d5yqgp25bz69pj6sw2j55dxdchq63wljxqkhcwxyy9lh"; depends=[]; }; textrank = derive2 { name="textrank"; version="0.3.0"; sha256="1sjzllz3ixxr043hbmbvwkwvj5wzh3m08x9z7h6hvy8ld8nzmn74"; depends=[data_table digest igraph]; }; textreadr = derive2 { name="textreadr"; version="0.9.0"; sha256="04nyjrfxgwq8g3bdj12nnkia2xn2zngk1rprlkpyicrisgq36agk"; depends=[antiword curl data_table pdftools readxl rvest striprtf textshape xml2]; }; - textrecipes = derive2 { name="textrecipes"; version="0.0.2"; sha256="1wks8z8wggx318haplyw4km2nh1vrl805gvyckb79n569f8ks9ah"; depends=[dplyr generics lifecycle magrittr purrr recipes rlang SnowballC stopwords stringr text2vec textfeatures tibble tokenizers]; }; + textrecipes = derive2 { name="textrecipes"; version="0.1.0"; sha256="05ib5j1bphninc2v0bpaxdn2bnkj5ak6ldm6z3dvj7gmxk7p5cjc"; depends=[dplyr generics magrittr Matrix purrr recipes rlang SnowballC stopwords stringr tibble tidyr tokenizers]; }; textreg = derive2 { name="textreg"; version="0.1.5"; sha256="0h44z5hyndnvzd9axix7gpmhbdx347dfgxw9r8w38kyw6dklbjy6"; depends=[NLP Rcpp tm]; }; textreuse = derive2 { name="textreuse"; version="0.1.4"; sha256="0qfp7ffzb5p3k3wiw8i1zjskni8f38rzkjnss97j9f3vhhb8j4r7"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tidyr]; }; textshape = derive2 { name="textshape"; version="1.6.0"; sha256="1pl85wjq5rl25gdlh4cp0l14hn76rrmpl7l1fn7kq9lwj9yfpcs8"; depends=[data_table slam stringi]; }; @@ -14447,7 +14464,7 @@ in with self; { tfhub = derive2 { name="tfhub"; version="0.7.0"; sha256="1a4iasasfbd44hljxkf2a76j1nb6l6jmijw8f52h5m00m8arfh2i"; depends=[magrittr reticulate rstudioapi tensorflow]; }; tfio = derive2 { name="tfio"; version="0.4.1"; sha256="089vh0k12z0ymk4v585hfnl5yqp28rgzqgy633m874h6fqzhhxvp"; depends=[forge magrittr reticulate tensorflow tfdatasets]; }; tfplot = derive2 { name="tfplot"; version="2015.12-1"; sha256="1x007j6ibbzfr0kncvsr4c7295jv3c4amg2dpyjvdir9h665nc23"; depends=[tframe]; }; - tfprobability = derive2 { name="tfprobability"; version="0.8.0.0"; sha256="1h32r15yxxzmvqp0gs2k5m2c6z1jkgfwj757sl6pfhwpr7av9zqp"; depends=[keras magrittr reticulate tensorflow]; }; + tfprobability = derive2 { name="tfprobability"; version="0.9.0.0"; sha256="1idvz3ph0fjaa1bd4zgwsvqhdf604sl76r4g4askmww42hycvpqp"; depends=[keras magrittr reticulate tensorflow]; }; tframe = derive2 { name="tframe"; version="2015.12-1.1"; sha256="1yff22jzh1mp73zbz2mav6z8m42lylfjhb8dgxj4337fv3if3i13"; depends=[]; }; tframePlus = derive2 { name="tframePlus"; version="2016.7-1"; sha256="12xi2xw4pr78n3cppfknpxmjp2263pb4kqj9v412yxwp82rgb6yk"; depends=[tframe timeSeries]; }; tfruns = derive2 { name="tfruns"; version="1.4"; sha256="1mqv5m13qm1dqz0622jd5ayb3nk76lfa657y2hyqv261flxizhvg"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; }; @@ -14459,6 +14476,7 @@ in with self; { thankr = derive2 { name="thankr"; version="1.0.0"; sha256="089ikp85d5ia6a1qzmw8dkgcmz628cibmwfzcpk7m3ii8acxq91w"; depends=[]; }; thectar = derive2 { name="thectar"; version="1.0.0"; sha256="1qh0qzg0ybb38kzm56xxlvhm201pdjm16aky5f1fdflcsszgy8mx"; depends=[proxy smacof]; }; theiaR = derive2 { name="theiaR"; version="0.3.0"; sha256="0z3i6dgf2mv954llb6vk6g09gdk1hi0fjygk09jp8p9cygn7r941"; depends=[askpass httr R6 raster XML]; }; + themetagenomics = derive2 { name="themetagenomics"; version="1.0.0"; sha256="1wchvbqlp6kkpahqdrc52pjn79c9xkr6qzfm6vpzc07lp6l05iji"; depends=[ggplot2 lda lme4 Matrix plotly Rcpp rstan scales shiny stm]; }; themis = derive2 { name="themis"; version="0.1.0"; sha256="1hsrm8z9fh8smzw9yda8j32zq9warnpy6rihyni0zwchgp3iyawq"; depends=[dials dplyr generics purrr RANN recipes rlang ROSE tibble tidyselect unbalanced withr]; }; thermocouple = derive2 { name="thermocouple"; version="1.0.2"; sha256="1rlvhw3i83iq1vibli84gj67d98whvgkxafwpmisva1m4s1bmij4"; depends=[]; }; theseus = derive2 { name="theseus"; version="0.1.0"; sha256="1f6vl0m8fcchafn78vrfw610d0sp9rf8kd3q5n7b0zd2yby10dq0"; depends=[dplyr ggplot2 gridExtra magrittr phyloseq ShortRead splancs tidyr tidyverse vegan viridis]; }; @@ -14478,16 +14496,17 @@ in with self; { thsls = derive2 { name="thsls"; version="0.1"; sha256="18z7apskydkg7iqrs2hgnzby578qsvyd73wx8v4z3aa338lssdi7"; depends=[Formula]; }; thurstonianIRT = derive2 { name="thurstonianIRT"; version="0.9.0"; sha256="0jjrdx5f581h8vh0fw4p85mlqfym467azp7cln48wzi1s28m9mn2"; depends=[BH dplyr lavaan magrittr MplusAutomation mvtnorm Rcpp RcppEigen rlang rstan rstantools StanHeaders tibble tidyr]; }; tibble = derive2 { name="tibble"; version="2.1.3"; sha256="06jfayiip8j8ibdhw3fvxn4n8aqbqhwanrszpzlsf92xdfgfm34s"; depends=[cli crayon fansi pillar pkgconfig rlang]; }; - tibbleOne = derive2 { name="tibbleOne"; version="0.1.0"; sha256="01v3jqxps0d27hg50d38zzh8lypr5735xsdggpc6zmqd39cbnjsp"; depends=[dplyr flextable forcats glue kableExtra knitr labelled lifecycle magrittr officer purrr rlang stringr tibble tidyr tidyselect vctrs]; }; + tibbleOne = derive2 { name="tibbleOne"; version="0.1.1"; sha256="1cdk0m6g187kj836jh1n0picpaaybr5dxwiks5ppj5bpybw7x3xc"; depends=[dplyr flextable forcats glue kableExtra knitr labelled lifecycle magrittr officer purrr rlang stringr tibble tidyr tidyselect vctrs]; }; tibbletime = derive2 { name="tibbletime"; version="0.1.3"; sha256="0p42g73cmw460v372317as50ijvsg49avg9cf222ypf1v0ls3ig1"; depends=[assertthat dplyr glue hms lifecycle lubridate purrr Rcpp rlang tibble tidyselect vctrs zoo]; }; tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.1"; sha256="1r58myi7x4hqqvyrphxy4ppa1lnad6x2ginfq2j52ax53zr07ajp"; depends=[RCurl rjson]; }; tictactoe = derive2 { name="tictactoe"; version="0.2.2"; sha256="1fx8plj5zr04xwk5hfj3zqhcknidxlzya2q14cf0m3y33a86lx42"; depends=[hash]; }; tictoc = derive2 { name="tictoc"; version="1.0"; sha256="1zp2n8k2ax2jjw89dsri268asmm5ry3ijf32wbca5ji231y0knj7"; depends=[]; }; - tidyLPA = derive2 { name="tidyLPA"; version="1.0.4"; sha256="154jikhm1dnriwdib5ncmkjixlihs3b74ilpi225h8ijq84n31ai"; depends=[dplyr ggplot2 mclust mix MplusAutomation tibble]; }; - tidyREDCap = derive2 { name="tidyREDCap"; version="0.1.0"; sha256="177jrkd415rl7cz0vyank2bxiqkywcrva8xi8j2hyi6j6hkf0m6a"; depends=[magrittr purrr stringr tibble]; }; - tidyRSS = derive2 { name="tidyRSS"; version="1.2.11"; sha256="0ikizs24frvv888zxris6j41lfcvy7hrp5z3h3mk5vxdlqi3rag7"; depends=[dplyr httr jsonlite lubridate magrittr purrr sf stringr testthat tibble xml2]; }; + tidyHeatmap = derive2 { name="tidyHeatmap"; version="0.99.9"; sha256="04vx1ck1s6v4fzxxd4cpm5z3f0dzx3b9262xabnq75swng90w03r"; depends=[circlize ComplexHeatmap dplyr magrittr purrr RColorBrewer rlang tidyr viridis]; }; + tidyLPA = derive2 { name="tidyLPA"; version="1.0.5"; sha256="15zzqyzkdcmk10n89wm31vs7nwqss11a4fphsqnbvvx55l7g77mm"; depends=[dplyr ggplot2 gtable mclust mix MplusAutomation tibble]; }; + tidyREDCap = derive2 { name="tidyREDCap"; version="0.2.0"; sha256="03kx91avw6zbmrcxvhkb7i3syw3ajkv9ypvgn2iq3ki887vbiwzw"; depends=[dplyr janitor magrittr purrr rlang stringr tibble tidyr]; }; + tidyRSS = derive2 { name="tidyRSS"; version="2.0.1"; sha256="06pqhvgiibf1s72abd0rq3fv55plkd4481b3jhvxm3cd2isa3gbw"; depends=[anytime dplyr httr jsonlite magrittr purrr rlang tibble xml2]; }; tidyUSDA = derive2 { name="tidyUSDA"; version="0.2.6"; sha256="02vrjpg0b651w5mvwhj60isy79q0nid6vyn2bhkddfaffs823lq0"; depends=[crayon curl dplyr fuzzyjoin ggplot2 jsonlite keyring magrittr nlme rgdal sf stringi tigris usethis]; }; - tidybayes = derive2 { name="tidybayes"; version="1.1.0"; sha256="1mq6gqr66pqrwdmnk3fmfi508ds086k7jnlazi5mczn4r6pdyzd7"; depends=[arrayhelpers coda dplyr forcats ggplot2 ggstance HDInterval magrittr plyr purrr rlang tibble tidyr tidyselect]; }; + tidybayes = derive2 { name="tidybayes"; version="2.0.1"; sha256="1v46rn76k7yc9d0x2q28vy452brr82bkpb0av7spk6xf6rcrpzhh"; depends=[arrayhelpers coda dplyr forcats ggplot2 HDInterval magrittr plyr purrr rlang scales tibble tidyr tidyselect]; }; tidyboot = derive2 { name="tidyboot"; version="0.1.1"; sha256="0nss1ci763g9p5f33g163ppamx72axc8xhrils0cql3ka8439pmn"; depends=[dplyr modelr purrr rlang tidyr]; }; tidycells = derive2 { name="tidycells"; version="0.2.2"; sha256="1h1g2kw4q0qgakj716gzd8jcn0hgsy5l1cypk35s6arz73xrxf0r"; depends=[dplyr ggplot2 magrittr purrr rlang stringr tibble tidyr unpivotr]; }; tidycensus = derive2 { name="tidycensus"; version="0.9.6"; sha256="16lcldbs1h8y1ajsj7lv04h0gq93hfcd0mbws2wb5pgx0jr187yk"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; @@ -14495,33 +14514,34 @@ in with self; { tidycomm = derive2 { name="tidycomm"; version="0.1.0"; sha256="0xas6nr7fy612r0b5h8ncvirxhzy099zvhdzxbnskm3sa21046ni"; depends=[broom dplyr forcats glue magrittr MBESS purrr rlang stringr tibble tidyr]; }; tidycwl = derive2 { name="tidycwl"; version="1.0.4"; sha256="1f3lrdl73lx0a0y6kz33i6s8nkcwdjdmc6mvnkqp3n8r851q46lg"; depends=[dplyr htmlwidgets jsonlite magrittr visNetwork webshot yaml]; }; tidydice = derive2 { name="tidydice"; version="0.0.6"; sha256="1g0x426gri1s0fyn2srl7ni0zvrnx1wvg5zcr19fxgdw9m8rxxp2"; depends=[assertthat dplyr ggplot2 magrittr purrr tibble]; }; - tidygapminder = derive2 { name="tidygapminder"; version="0.1.0"; sha256="1fr4yrq7hzzllkclf7cwicfjwg5gcf5la0chc8mah7690lkdi39b"; depends=[data_table dplyr readxl tidyr]; }; + tidyfst = derive2 { name="tidyfst"; version="0.8.8"; sha256="1cssxs6zfmld8nw567hc12bmcjdyyrz3iljbvxiz47s5qnsbhany"; depends=[data_table fst stringr]; }; + tidygapminder = derive2 { name="tidygapminder"; version="0.1.1"; sha256="1m6bynwnw1msrzvdmy12w3ympinqpd8j3may3rwmg9941nndjv2d"; depends=[data_table dplyr readxl tidyr]; }; tidygenomics = derive2 { name="tidygenomics"; version="0.1.2"; sha256="1cnwmmmzp9kg4k7iy2kgb22bdllpnz257pv1ahy3l11zy6bl48fc"; depends=[dplyr fuzzyjoin IRanges purrr Rcpp rlang tidyr]; }; tidygeocoder = derive2 { name="tidygeocoder"; version="0.2.4"; sha256="0r37s3hfyqz4zqs7cwp72dhc6f1y7zfc22v9b0705bdbqnfllahn"; depends=[dplyr httr jsonlite purrr rlang stringr tibble tidyr tmaptools]; }; tidygraph = derive2 { name="tidygraph"; version="1.1.2"; sha256="1zpsarm74afbc7p5dlyb0whc09670qdcddw1ckb25cfc9hfh0hjn"; depends=[dplyr igraph magrittr pillar R6 Rcpp rlang tibble tidyr]; }; tidyhydat = derive2 { name="tidyhydat"; version="0.5.0"; sha256="0bf8rnk0yhdjjs79d4s833z9j165cwvg3xdmqg3kc5yzc31m4hsg"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr rlang RSQLite tidyr]; }; - tidyimpute = derive2 { name="tidyimpute"; version="0.1.0"; sha256="03b475nn206hxq3i0n7j1qws82rwwk5vqivmdg5mff44dvz4gl5s"; depends=[dplyr na_tools rlang]; }; tidyjson = derive2 { name="tidyjson"; version="0.2.4"; sha256="1nbg7wg8r38ydvcp3kbxmmnayxrdkl3p7x0fjxny3bj9a0fp99y7"; depends=[assertthat dplyr jsonlite magrittr purrr tibble tidyr]; }; tidylog = derive2 { name="tidylog"; version="1.0.0"; sha256="12civvsgj9d7ligc84sqii6a8q3ll12b8xs99f6rqp4nhzhpavv3"; depends=[clisymbols dplyr glue tidyr]; }; - tidymodels = derive2 { name="tidymodels"; version="0.0.3"; sha256="07l33slvh38lpycz2v4slwz06v33ni9jqr5wv672gzcgirw5xy7p"; depends=[broom cli crayon dials dplyr ggplot2 infer magrittr parsnip pillar purrr recipes rlang rsample rstudioapi tibble tidyposterior tidypredict tidytext yardstick]; }; + tidymodels = derive2 { name="tidymodels"; version="0.1.0"; sha256="1bi5vh80f6f2ibhyaapgnl7q1mkkx8425vj6ci0ml5rb7l8jhjm8"; depends=[broom cli crayon dials dplyr ggplot2 infer magrittr parsnip pillar purrr recipes rlang rsample rstudioapi tibble tidyposterior tidypredict tidytext tune workflows yardstick]; }; tidymv = derive2 { name="tidymv"; version="2.2.0"; sha256="0g550b0frgk4wy3sicsqqinffrlbqzghhcnvh3snci6xd7j37hmm"; depends=[dplyr ggplot2 itsadug magrittr mgcv rlang tibble tidyr]; }; tidync = derive2 { name="tidync"; version="0.2.3"; sha256="1wjw3fmyj8f95f94zai58h8b6h0vqqlrw4c629jjgg8ayy7aay9p"; depends=[dplyr forcats magrittr ncdf4 ncmeta purrr rlang RNetCDF tibble tidyr]; }; tidypmc = derive2 { name="tidypmc"; version="1.7"; sha256="1fijlvdiw4vwm34wizm4xlm0x10vvpkldzk7rrla44apq7y2w3yq"; depends=[dplyr readr stringr tibble tokenizers xml2]; }; tidyposterior = derive2 { name="tidyposterior"; version="0.0.2"; sha256="1sdbar3ycnjqyjy664zyhr9xks48l6g6mw8p5scp31x3gdh352rs"; depends=[dplyr generics ggplot2 purrr rlang rsample rstanarm tibble tidyr]; }; - tidypredict = derive2 { name="tidypredict"; version="0.4.3"; sha256="1mn14rd33irgcfrhm9d3zd71jdwdjay5z5xsmas8d9zmf05g0bcr"; depends=[dplyr generics knitr purrr rlang tibble]; }; - tidyquant = derive2 { name="tidyquant"; version="0.5.9"; sha256="013yxg3wqvrl7ybda8lxil7cvzzlllb9f2l107867c7af9fbf7vy"; depends=[cli crayon dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod rlang rstudioapi stringr tibble tidyr timetk TTR xml2 xts]; }; + tidypredict = derive2 { name="tidypredict"; version="0.4.5"; sha256="1i6zl6wjz6wbpkmkc9z9ikp8zgck3qh38lar0r6q2jzl8fxpimg4"; depends=[dplyr generics knitr purrr rlang tibble]; }; + tidyquant = derive2 { name="tidyquant"; version="1.0.0"; sha256="0d84wln98afa23z4sfxpr1xp7p3kjqvnidl69v3l65wi2lkxc87b"; depends=[alphavantager cli crayon dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod riingo rlang rstudioapi stringr tibble tidyr tidyselect timeDate timetk TTR xml2 xts]; }; tidyquery = derive2 { name="tidyquery"; version="0.2.0"; sha256="1qhiqaijw71lqv2lffsisk53mvxckr7jj6qxvg9l3wygmhskzkvw"; depends=[dplyr lubridate queryparser rlang stringr]; }; tidyqwi = derive2 { name="tidyqwi"; version="0.1.1"; sha256="0qrwclaz6cf2wg3rkg2nqjygflj0a1mx4cfbv5lx4r194km2dmr9"; depends=[dplyr furrr future httr jsonlite labelled magrittr purrr stringr tidyr xml2]; }; tidyr = derive2 { name="tidyr"; version="1.0.2"; sha256="0safj8bcf8libwr0jx4059bmarngvhfddrcv8k5iw39m9lpxs0r4"; depends=[dplyr ellipsis glue lifecycle magrittr purrr Rcpp rlang stringi tibble tidyselect vctrs]; }; - tidyrules = derive2 { name="tidyrules"; version="0.1.0"; sha256="1pwbgk48rrxcxwjnqfjg4718fw059h4qh3vfni8psgd5snfbsjql"; depends=[assertthat magrittr partykit purrr stringr tibble]; }; - tidyselect = derive2 { name="tidyselect"; version="0.2.5"; sha256="0x3cp36byhfjajikr1lwffjm85ayw3bcs7d7kb0cydgs61ifiqjw"; depends=[glue purrr Rcpp rlang]; }; + tidyrules = derive2 { name="tidyrules"; version="0.1.3"; sha256="09alqz7rsd98qach8hi28143xgbjapk4m9l47dvk0vpx3mfnkzq3"; depends=[assertthat magrittr partykit purrr stringr tibble]; }; + tidyselect = derive2 { name="tidyselect"; version="1.0.0"; sha256="1bwwsljkg1bxh7xnqxv7n0n1s9y8x407i6lsv826vy1ss1k1fxpy"; depends=[ellipsis glue purrr rlang vctrs]; }; tidystats = derive2 { name="tidystats"; version="0.4"; sha256="1jxn8la5s3mdh9kbkbvlc5icwa7ymingaxrl0q49ykifrsnbpd4a"; depends=[dplyr jsonlite purrr readr stringr tibble tidyr]; }; tidystopwords = derive2 { name="tidystopwords"; version="0.9.0"; sha256="1zw6rz8fs8mynaqhrxidrar8vyiq73i8hl4h2lrfz83rxrihbq39"; depends=[dplyr stringr]; }; tidystringdist = derive2 { name="tidystringdist"; version="0.1.4"; sha256="1srxh5gyspcghzvnmpyq36ky608ipf71vv0s1jg01mgf2i5pdkf4"; depends=[attempt rlang stringdist tibble]; }; - tidytext = derive2 { name="tidytext"; version="0.2.2"; sha256="1h1fpy86fha3jidb1xz0n3mfn7110mmf3dz9hpyfczqpyd62k3qq"; depends=[dplyr generics hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; }; + tidytable = derive2 { name="tidytable"; version="0.3.2"; sha256="0svd1ay3fhrbxqyhphw2ndw4knsb2sxz7b9yw82ws0xfsjf2q8d4"; depends=[data_table magrittr rlang]; }; + tidytext = derive2 { name="tidytext"; version="0.2.3"; sha256="12q6f7z3lzjgzmz5scp5jx89r2xkbvm20dc99kma9ddvbj7zj0y1"; depends=[dplyr generics hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; }; tidytidbits = derive2 { name="tidytidbits"; version="0.2.1"; sha256="1hyqk8p4w1mjk9f497f2lh8hlic6fs37jnawqpfmrl39ylx4z6r7"; depends=[dplyr extrafont forcats magrittr purrr rlang stringr tibble tidyr tidyselect]; }; - tidytransit = derive2 { name="tidytransit"; version="0.6.1"; sha256="0gm33d73k5rygdk6waaqlknkm65gg5xc6w85m3qhllch2akphh1j"; depends=[assertthat data_table digest dplyr hms httr lubridate magrittr readr rlang sf tibble tidyr zip]; }; - tidytree = derive2 { name="tidytree"; version="0.3.1"; sha256="1bnzs62z2l8ck2h9gabmxvayizv4nfn8dmyzry83fv0cspjbyiv7"; depends=[ape dplyr lazyeval magrittr rlang tibble]; }; + tidytransit = derive2 { name="tidytransit"; version="0.7.0"; sha256="1b4jlv7b4xl6hil1ik94hkgry7pwdd0zxw2dls2rryclmhdc95xp"; depends=[assertthat data_table digest dplyr hms httr lubridate magrittr readr rlang sf tibble tidyr zip]; }; + tidytree = derive2 { name="tidytree"; version="0.3.2"; sha256="0dx9jn19mfykn20camsmq1amlgg0w6z5hn5rdqygs1fk1l5aazad"; depends=[ape dplyr lazyeval magrittr rlang tibble]; }; tidyverse = derive2 { name="tidyverse"; version="1.3.0"; sha256="02gyys08qv2v4cl2d66gml4d31ipxay0iyfwwksvxyclx60wp2kd"; depends=[broom cli crayon dbplyr dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr pillar purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; tidyxl = derive2 { name="tidyxl"; version="1.0.4"; sha256="19kcm9lfbkf61z0whfkn69b8m36qd1rvyhyk5y0cqbzkxvq8f70i"; depends=[piton Rcpp]; }; tiff = derive2 { name="tiff"; version="0.1-5"; sha256="0asf2bws3x3yd3g3ixvk0f86b0mdf882pl8xrqlxrkbgjalyc54m"; depends=[]; }; @@ -14531,7 +14551,7 @@ in with self; { tigger = derive2 { name="tigger"; version="0.4.0"; sha256="1ns4shv4aaxlgahy9vy3wxxrnrz4zb0w40fcsldmh5jrvbxhhsb6"; depends=[alakazam doParallel dplyr foreach ggplot2 gridExtra gtools iterators lazyeval rlang shazam stringi tidyr]; }; tightClust = derive2 { name="tightClust"; version="1.1"; sha256="0vqkp2g6z8y3b6dhzglmacjhf2qi1sg80kb941mwfafin2k40zbm"; depends=[]; }; tigreBrowserWriter = derive2 { name="tigreBrowserWriter"; version="0.1.5"; sha256="0izgx1khci6qc6pz85dxj75kzxvpr30l0vhcv9476jrcbwqs4k8m"; depends=[DBI RSQLite]; }; - tigris = derive2 { name="tigris"; version="0.9.1"; sha256="1vwnxw4pg15pn87cz6f3ncfn1f145svikn8y2sphyvp0x7cid53x"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; + tigris = derive2 { name="tigris"; version="0.9.2"; sha256="01jb7rriwa1xq70r3087mllq5smwxrsky3a375i8y946qd3mkvs3"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; tikzDevice = derive2 { name="tikzDevice"; version="0.12.3"; sha256="1d8cxb3srmfv54c61c25myiknkm43ysl69lqjknhaj682x0nyz2r"; depends=[filehash png]; }; tilegramsR = derive2 { name="tilegramsR"; version="0.2.0"; sha256="11cnyvlghg8z7lr9ahzsjpyjrqnxqs77wdcydqvavrsqj745xvi2"; depends=[sf sp]; }; tiler = derive2 { name="tiler"; version="0.2.4"; sha256="1j1952vp0gnx0pnhqydipj4qw3cm05im502jc77wb2r1vklwimgb"; depends=[png raster rgdal sp]; }; @@ -14552,7 +14572,7 @@ in with self; { timereg = derive2 { name="timereg"; version="1.9.4"; sha256="0jxm3h2sjc83klxdry5r1wgliadk6967cmiifycfpz282vpfxx7v"; depends=[lava numDeriv survival]; }; timesboot = derive2 { name="timesboot"; version="1.0"; sha256="1ixmcigi1bf42np93md8d3w464papg9hp85v0c3hg3vl4nsm2bji"; depends=[boot]; }; timeseriesdb = derive2 { name="timeseriesdb"; version="0.4.1"; sha256="1ghb3lg63fs9zx34l5qczv39mdccnmqzlc74l1zhb8qmsg8sm1g2"; depends=[data_table DBI jsonlite openxlsx RPostgreSQL shiny xtable xts zoo]; }; - timetk = derive2 { name="timetk"; version="0.1.2"; sha256="0dp7pjydqcdi2nn4q73nqr4i4d9n4md9vb5y3znrlf1m8m9m4k4a"; depends=[dplyr lazyeval lubridate padr purrr readr stringi tibble tidyr xts zoo]; }; + timetk = derive2 { name="timetk"; version="0.1.3"; sha256="0p9vprknxwh5w3119dwvzl3hvckf4s3kag7gf3cyj685yv0m355c"; depends=[dplyr lazyeval lubridate padr purrr readr recipes rlang stringi tibble tidyr xts zoo]; }; timetools = derive2 { name="timetools"; version="1.14"; sha256="13jchgd9fc8hxj74wm1kg4rwcng4yxblkq04i33djsqghgb5f9mj"; depends=[]; }; timetree = derive2 { name="timetree"; version="1.0"; sha256="1fpdp6mkwm67svqvkfflvqxn52y2041zl09rxrms28ybbd5f84c0"; depends=[phangorn XML]; }; timevis = derive2 { name="timevis"; version="0.5"; sha256="1psmnl6pkbizi2kjpaz9w32z2dkxlh4r229mfxsfqnjvf9sc34kj"; depends=[htmltools htmlwidgets jsonlite lubridate magrittr rmarkdown shiny]; }; @@ -14560,15 +14580,14 @@ in with self; { timsac = derive2 { name="timsac"; version="1.3.6"; sha256="186919qka9j3kfpdw2gbh16n48d6xgz9lfqgk4b17f1d7l72iplg"; depends=[]; }; tinsel = derive2 { name="tinsel"; version="0.0.1"; sha256="0n1x0cf4x6cq1yks0444nxd9snga4m6inc5lfvb7k96fzjb3xgbp"; depends=[]; }; tint = derive2 { name="tint"; version="0.1.2"; sha256="0afqlyi6d72x30pzzvmznz1l5pq4n30qiqa9ncbf0wjvqji7a182"; depends=[htmltools knitr rmarkdown]; }; - tinter = derive2 { name="tinter"; version="0.0.1"; sha256="1zw5a79mryqighf8b6gidsi30001749sllpwqwbck26cyal6m8y6"; depends=[checkr]; }; tinyProject = derive2 { name="tinyProject"; version="0.6.1"; sha256="0cflnfp5mib3j1y3n5yvi867h5a7z6xr6163gq9y9b6nrl2skxfk"; depends=[brew R_utils]; }; tinytest = derive2 { name="tinytest"; version="1.1.0"; sha256="1y3f0x56xagf9m5wr2b26qahww13p8i2s66yr51xy9pqxdyjh2yl"; depends=[]; }; - tinytex = derive2 { name="tinytex"; version="0.19"; sha256="0jlcrvcqcbkimg7w40z5vhlnakb829vfgqpspm3pfl8karwzgqp6"; depends=[xfun]; }; + tinytex = derive2 { name="tinytex"; version="0.20"; sha256="0n8v8inpsc99r0snvqbjhqlc6nm9hxjsw120hrxc2mw03pa5fvkg"; depends=[xfun]; }; tiobeindexr = derive2 { name="tiobeindexr"; version="0.1.1"; sha256="09vw83hkf7lgd3xyhbmqkyv57g3dz856230xkf8630jiicfvcg3b"; depends=[rvest xml2]; }; tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; }; tippy = derive2 { name="tippy"; version="0.0.1"; sha256="0kkyi4s4ffpyjyfl89cd5y788ab1p253rx179k422y3y1z6w1md7"; depends=[htmltools htmlwidgets jsonlite shiny]; }; tipr = derive2 { name="tipr"; version="0.1.1"; sha256="138xmkfad0xjrmr9v3ladbwsyknyad27wxcav03n6f72plhxmxb6"; depends=[broom purrr tibble]; }; - tis = derive2 { name="tis"; version="1.37.1"; sha256="0xg0fcavvny4h8c3ivhccvlb81l1pkgfvfj09658l2qvgi1iyxln"; depends=[]; }; + tis = derive2 { name="tis"; version="1.38"; sha256="0mqnvjfncfr8zc5rz1qq8jr1kv63p7sva7fvr3adbs7lgjza0yvm"; depends=[]; }; titan = derive2 { name="titan"; version="1.0-16"; sha256="0x30a877vj99z3fh3cw9762j5ci56964j2466xfbwcywhn9njz5r"; depends=[boot lattice MASS]; }; titanic = derive2 { name="titanic"; version="0.1.0"; sha256="0mdmh0ciwfig00847bmvp50cyvj8pra6q4i4vdg7md19z5rjlx3j"; depends=[]; }; titeIR = derive2 { name="titeIR"; version="0.1.0"; sha256="047vidn3zydbjijwgz6qm2d9j2ny8ng2sv5jzm8zb300y7k2426c"; depends=[Iso]; }; @@ -14603,16 +14622,15 @@ in with self; { tmvmixnorm = derive2 { name="tmvmixnorm"; version="1.0.2"; sha256="04bjdlrz82v9skirap2fmngi2sv9xakkgmkgpwdv3qshszvx3wz4"; depends=[]; }; tmvnsim = derive2 { name="tmvnsim"; version="1.0-2"; sha256="03xsvsg9bqvgl98ywid3h91mmlhax5s6wvmypp3hq91vmc5kvxlp"; depends=[]; }; tmvtnorm = derive2 { name="tmvtnorm"; version="1.4-10"; sha256="1w3kmpx25l7rb80vpclqq4pbbv12qgysyqxjq3lp55l9nklkb7qs"; depends=[gmm Matrix mvtnorm]; }; - tnam = derive2 { name="tnam"; version="1.6.5"; sha256="0jbwnsnn6875yprmh6y2i0bvr875hfsg7wfsj6ydmjpr5cpqqk56"; depends=[igraph lme4 network Rcpp sna vegan xergm_common]; }; - tnet = derive2 { name="tnet"; version="3.0.14.1"; sha256="1fvczx1lc8a7w4mbg1yzsiayfg5qwyjvg02s4r631vcml6vkznsf"; depends=[igraph survival]; }; + tnet = derive2 { name="tnet"; version="3.0.16"; sha256="0922y9zb64zazl2irwfxxbghkgcwi2q57gylpiaxgmj4q6lc62l9"; depends=[igraph survival]; }; toOrdinal = derive2 { name="toOrdinal"; version="1.1-0.0"; sha256="0zg4zk7jx8s57g8nb0jw7r7gss00349jmkglf6sz26p7jldpgmff"; depends=[crayon testthat]; }; - todor = derive2 { name="todor"; version="0.0.5"; sha256="1zv6bky5v14csq3pmyy7qzmy680pg3qrj1zghqixsf54aqm7h96q"; depends=[rex rstudioapi stringr]; }; + todor = derive2 { name="todor"; version="0.1.0"; sha256="0xgw2mz0b96adycwfyga17r5s9k47q5bgvnsxmqm4h6mx7d1fzzx"; depends=[rex rstudioapi stringr]; }; togglr = derive2 { name="togglr"; version="0.1.33"; sha256="105c9vxa67bqccj31ksk5myfd0v7v0wbz6qqjhxqndlg7v6ggfzc"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr parsedate prettyunits purrr rstudioapi]; }; - tokenbrowser = derive2 { name="tokenbrowser"; version="0.1.1"; sha256="0sslli1m4lrg8bf5rzjndvf9hsw3c6mqwj8cp27mgn8ibxckrjd2"; depends=[Rcpp stringi]; }; + tokenbrowser = derive2 { name="tokenbrowser"; version="0.1.2"; sha256="1qbqqmn7q5w9cggc72n1r541dw1vmq7kazhpbyhcbpfd5kvjc2r7"; depends=[Rcpp stringi]; }; tokenizers = derive2 { name="tokenizers"; version="0.2.1"; sha256="006xf1vdrmp9skhpss9ldhmk4cwqk512cjp1pxm2gxfybpf7qq98"; depends=[Rcpp SnowballC stringi]; }; tokenizers_bpe = derive2 { name="tokenizers.bpe"; version="0.1.0"; sha256="1pwgjrzdcsafpv9rlyly6fckcjiymz0xcjm9byavj069kc4c69mi"; depends=[Rcpp]; }; tolBasis = derive2 { name="tolBasis"; version="1.0"; sha256="0g4jdwklx92dffrz38kpm1sjzmvhdqzv6mj6hslsjii6sawiyibh"; depends=[lubridate polynom]; }; - tolerance = derive2 { name="tolerance"; version="1.3.0"; sha256="17qh4ad1f3fbcpwlxxqh8qr9bnwjcl4yxk0l3fkbr6b2l4rc5p86"; depends=[rgl]; }; + tolerance = derive2 { name="tolerance"; version="2.0.0"; sha256="001snzr2ipag3zprynydlbi9prkjzrllc054qh7m0qwkb3r19jjd"; depends=[MASS rgl]; }; toolmaRk = derive2 { name="toolmaRk"; version="0.0.1"; sha256="0pdr8lq4c11ia03v68lbfq38p3qp770mbj0nsbjsgbqi0pv9i1vx"; depends=[dplyr ggplot2 plyr reshape2]; }; tools4uplift = derive2 { name="tools4uplift"; version="0.1-1"; sha256="0difrjqgj8amc49mwh059ca9mr0z1fzy0g43vk43alsyl8lvajc4"; depends=[dplyr glmnet]; }; topicdoc = derive2 { name="topicdoc"; version="0.1.0"; sha256="0qliy6y8l09nblch1swlywam2awzwjl5xx0w8c3kiz48jxfysw0j"; depends=[slam topicmodels]; }; @@ -14621,8 +14639,8 @@ in with self; { topoDistance = derive2 { name="topoDistance"; version="1.0.1"; sha256="055z3gvqlb8nyy58ix89w7miav9gj3h43a4wcfc3kagd97xc3222"; depends=[gdistance igraph plotly raster RColorBrewer scales sp]; }; topologyGSA = derive2 { name="topologyGSA"; version="1.4.6"; sha256="0vas7qab5a86jb277ql63qjvfvx7iqqbcrwky7iyr0s8p8p794ia"; depends=[fields graph gRbase qpgraph]; }; topsis = derive2 { name="topsis"; version="1.0"; sha256="056cgi684qy2chh1rvhgkxwhfv9nnfd7dfzc05m24gy2wyypgxj3"; depends=[]; }; - tor = derive2 { name="tor"; version="1.1.1"; sha256="0vibnjm0q8rn73c5xdbfw5z4pk4ja1m1mx9c6p423pz72znwrcpw"; depends=[fs readr rlang tibble]; }; - tosca = derive2 { name="tosca"; version="0.1-4"; sha256="1c7x89b2vh2xl5bc1xgclmnk2gajqalxmz4ipqlwp9axz91w85gs"; depends=[data_table htmltools lda lubridate quanteda RColorBrewer stringr tm WikipediR]; }; + tor = derive2 { name="tor"; version="1.1.2"; sha256="1s34hzw3a4cm9gk85fcxgxwmn2xc7njs1iw1snd91id3gdl6vppx"; depends=[fs readr rlang tibble]; }; + tosca = derive2 { name="tosca"; version="0.2-0"; sha256="0sq6libv2vi5q3738fksjxabfhv63zc7nldgb4nh6k57yxqzwf3z"; depends=[data_table htmltools lda lubridate quanteda RColorBrewer stringr tm WikipediR]; }; tosls = derive2 { name="tosls"; version="1.0"; sha256="03nqwahap504yvcksvxdhykplbzmf5wdwgpzm7svn8bymdc472v2"; depends=[Formula]; }; totalcensus = derive2 { name="totalcensus"; version="0.6.3"; sha256="0489bzc8y4zgs4rpd52xbc2hm7g0y46j40f5bmqp5h56aq259jsa"; depends=[data_table magrittr purrr stringr]; }; touch = derive2 { name="touch"; version="0.1-5"; sha256="0dan4mlvc5lg9v4zj9w6gk3c4cy64kaa984y495xpc1bzmv5c6jd"; depends=[Rcpp]; }; @@ -14637,11 +14655,11 @@ in with self; { tracerer = derive2 { name="tracerer"; version="2.0.2"; sha256="0xh95qrd63s04zs69fcrmvwscn153qlpw2xlkzn8h6jwsd92amv9"; depends=[jsonlite Rcpp testit]; }; tracheideR = derive2 { name="tracheideR"; version="0.1.1"; sha256="1x1jwzgs2aqb3k17mm9mhfhnbwcmilhkjaz9rl40rcg84xjqdrpl"; depends=[tgram]; }; track = derive2 { name="track"; version="1.1.9"; sha256="1d0hab7xyayyhyyrbv8nvpka1kzry4yx10fg8aqwkca3nm7n2q3c"; depends=[]; }; - trackdem = derive2 { name="trackdem"; version="0.5.1"; sha256="06vhgm5sqafx90isfxq71gz82zznyjvl63rqyg5rx22syqsh4mbi"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo shiny]; }; + trackdem = derive2 { name="trackdem"; version="0.5.2"; sha256="1kax2fr252rd0pqdf7ndgl8pb492fs1scn8xyasxxjdnlghdkk0d"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo shiny]; }; trackdf = derive2 { name="trackdf"; version="0.2.1"; sha256="18kiwbrfalj19gjp2v3yhxlmc6liw5scfnwx2svq5f5h3h54a7iz"; depends=[data_table lubridate rgdal sp tibble]; }; trackeR = derive2 { name="trackeR"; version="1.5.2"; sha256="1f3giz6naxxyicgy9v0391ang43srwhy9zbiv4zmlc8i9v05b57i"; depends=[fda foreach ggmap ggplot2 ggridges gridExtra gtable jsonlite leaflet raster RSQLite scam sp xml2 zoo]; }; trackeRapp = derive2 { name="trackeRapp"; version="1.0"; sha256="05r012kcf86j45q00y6ynz9srd0by45w41bpx9mf7q4h8m5nm0jn"; depends=[changepoint colorspace DT foreach mapdeck mgcv plotly sf shiny shinydashboard shinyjs shinyWidgets trackeR V8 zoo]; }; - trackr = derive2 { name="trackr"; version="0.10.5"; sha256="0cngwszax3i9p0095kxrz7w4rnryc0lmylckixzrmhx80qkxcaw1"; depends=[CodeDepends fastdigest ggplot2 gridGraphics histry htmltools lattice miniUI RJSONIO rlang rmarkdown roprov rsolr shiny]; }; + trackr = derive2 { name="trackr"; version="0.10.6"; sha256="0p7i4cj5z1qis2a1mqqz3wrgwhhbcggyyfwj3zycm3xcig9f6d9b"; depends=[CodeDepends fastdigest ggplot2 gridGraphics histry htmltools lattice miniUI RJSONIO rlang rmarkdown roprov rsolr shiny]; }; tractor_base = derive2 { name="tractor.base"; version="3.3.2"; sha256="0y5gm0y4chl30f5qqq8qiiw4j8g32s4i9xrvyp3cwg902kf2p86i"; depends=[ore reportr RNifti shades]; }; trade = derive2 { name="trade"; version="0.5.4"; sha256="05skmm2j826wjhmxdvkln50y0mjy74qcl2hay2l1322qqs7phin6"; depends=[antitrust]; }; tradestatistics = derive2 { name="tradestatistics"; version="0.2.7"; sha256="1pl8qrzf4dx1pcyrhf2rzp5wrfdgv6azlpi83wy5w078ckm2hly3"; depends=[crul dplyr jsonlite magrittr purrr rlang stringr]; }; @@ -14661,13 +14679,13 @@ in with self; { translate = derive2 { name="translate"; version="0.1.2"; sha256="1w0xrg1xxwfdanlammmixf06hwq700ssbjlc3cfigl50p87dbc5x"; depends=[functional lisp RCurl RJSONIO]; }; translateR = derive2 { name="translateR"; version="1.0"; sha256="11kh9hjpsj5rfmzybnh345n1gzb0pdksrjp04nzlv948yc0mg5gm"; depends=[httr RCurl RJSONIO textcat]; }; translation_ko = derive2 { name="translation.ko"; version="0.0.1.5.2"; sha256="1w5xibg4znhd39f3i0vsqckp6iia43nblqxnzgj0ny6s7zmdq1wd"; depends=[]; }; - transplantr = derive2 { name="transplantr"; version="0.1.0"; sha256="0gzx4xmps1n8363q1y34gjgh48rnzh2ww19d6qg7q12mli2biz92"; depends=[]; }; - transport = derive2 { name="transport"; version="0.12-1"; sha256="04ds3i372ri0w3qy1nn6gjrhip89978zbpvi9c5dlsbh8wwk583l"; depends=[data_table Rcpp RcppEigen]; }; + transplantr = derive2 { name="transplantr"; version="0.2.0"; sha256="1kzi8rvswsmibxqnhqd1j42y848si6cxd8hpvwi55y8s4hcylw0y"; depends=[]; }; + transport = derive2 { name="transport"; version="0.12-2"; sha256="1d49gm5lwih7b7rav3c42brcp6xi3y55xw11r9n8illjwjayfcxd"; depends=[data_table Rcpp RcppEigen]; }; trapezoid = derive2 { name="trapezoid"; version="2.0-0"; sha256="0f6rwmnn61bj97xxdgbydi94jizv1dbq0qycl60jb4dsxvif8l3n"; depends=[]; }; trawl = derive2 { name="trawl"; version="0.2.1"; sha256="1ns4nk8zdnl2z9clc2q38sbb1ijkj86lcifxq7d111mcwsmpb6fi"; depends=[DEoptim MASS rootSolve Runuran squash TSA]; }; tree = derive2 { name="tree"; version="1.0-40"; sha256="1rr6ws62j9h36f3nl713f8h3ndkh95mv46l055jvgmby5lw1dazz"; depends=[]; }; tree_bins = derive2 { name="tree.bins"; version="0.1.1"; sha256="1flrkhdqimsn8dxn97xzl1fykx916i1dis1bfany44yk0cjmd85g"; depends=[data_table dplyr rpart rpart_utils]; }; - tree_interpreter = derive2 { name="tree.interpreter"; version="0.1.0"; sha256="17yci49zsz05ydjzs0zbz8xg2vdjmh8xq6cfxchrq488kvjyjzsz"; depends=[Rcpp RcppArmadillo]; }; + tree_interpreter = derive2 { name="tree.interpreter"; version="0.1.1"; sha256="18p1x53q1hhhagglgsq2axnr9l5rpa08vxjayqqmb6rsjrkygn78"; depends=[Rcpp RcppArmadillo]; }; treeClust = derive2 { name="treeClust"; version="1.1-7"; sha256="1s7kh6q0bkixsygrip95zf1bi10ihddsa5lq9dfxd68yh8rsby6z"; depends=[cluster rpart]; }; treeDA = derive2 { name="treeDA"; version="0.0.4"; sha256="0zhzb21lvxk278ysl275g39y2r8dlgqdix5rfg2pwv3nzj2531rc"; depends=[ggplot2 gtable Matrix mvtnorm phyloseq reshape2 sparseLDA]; }; treeHMM = derive2 { name="treeHMM"; version="0.1.1"; sha256="1chg1y26x4nm2wm2nsqw51lx2w8b89wdq8ywh1l03xhw8lgdsv47"; depends=[future gtools Matrix matrixStats PRROC]; }; @@ -14675,19 +14693,19 @@ in with self; { treeclim = derive2 { name="treeclim"; version="2.0.3"; sha256="03d734zxz4vjrx7xw9r8y8lcsacn0p92q09n05vqfx4p7wvpwp26"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; }; treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; treedater = derive2 { name="treedater"; version="0.5.0"; sha256="007rdrbv3v1z3qbyasla22rck105sqlqh93yfmxklihdydl7smfd"; depends=[ape limSolve]; }; + treefit = derive2 { name="treefit"; version="1.0.0"; sha256="10yf4bm26vgiy3ra0c5lpflp0xdijw9zwl4aq9bz89qhszzji1fa"; depends=[ggplot2 igraph patchwork pracma]; }; treelet = derive2 { name="treelet"; version="1.1"; sha256="0k3qhxjg7ws6jfhcvvv9jmy26v2wzi4ghnxnwpjm8nh7b90lbysd"; depends=[]; }; - treeman = derive2 { name="treeman"; version="1.1.3"; sha256="0xvazizpi3dbdgjd48ff4kg4dhsi2yzbnkk43pgyi21zii673yyn"; depends=[ape bigmemory plyr RJSONIO stringr]; }; treemap = derive2 { name="treemap"; version="2.4-2"; sha256="15bdgkdwryb55v82b3hpcx4ykfg5z7zf10h0wwknf6kl1kn34v90"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; treemapify = derive2 { name="treemapify"; version="2.5.3"; sha256="1y6fyzxk542fp4h975xfgajz7cjym3rjs6asal9arv94a9cqra33"; depends=[ggfittext ggplot2]; }; - treenomial = derive2 { name="treenomial"; version="1.1.1"; sha256="13dsls2x3nlsdqs8whr7yq8gkacw3rzrvcbj47vkwqcpbgk2xwi8"; depends=[ape Rcpp RcppArmadillo RcppThread]; }; + treenomial = derive2 { name="treenomial"; version="1.1.2"; sha256="0nn5vd23nxfpk8wm68m6sxnx495nb6bkgx2w9lgjy4s66sbnddp0"; depends=[ape Rcpp RcppArmadillo RcppThread]; }; treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; }; treeplyr = derive2 { name="treeplyr"; version="0.1.7"; sha256="11y15dslalwifarz79zyc5vxszyajkjyzm98p0w1n8gfr6lrq9yy"; depends=[ape dplyr geiger lazyeval phytools Rcpp]; }; treespace = derive2 { name="treespace"; version="1.1.3.2"; sha256="18xqvqpcknvwdvl84jskcwmsw3alcwns0d35a8paalwjkix03175"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn phytools Rcpp rgl RLumShiny scatterD3 shiny shinyBS]; }; treestartr = derive2 { name="treestartr"; version="0.1.0"; sha256="05rxy9lmb77ng4266871sd881mlp4rd5qalvsd7ps2x2j4plaqf4"; depends=[ape phytools]; }; - treethresh = derive2 { name="treethresh"; version="0.1-11"; sha256="1fksyn9mycr6dpw1yh5b3fa7fk7ndz7q39174daplm55jbrz1dr5"; depends=[EbayesThresh wavethresh]; }; + treestructure = derive2 { name="treestructure"; version="0.1.0"; sha256="0514q53bdwv9fwd58srhr6lzw1j56fcd64hml8w4rv4wzcd6c01m"; depends=[ape Rcpp]; }; trekcolors = derive2 { name="trekcolors"; version="0.1.1"; sha256="1fw2wgkkky79vy9sc3cn42vmfcdnsjsnhb81wvalwi6ww64fzrkh"; depends=[ggplot2]; }; trekfont = derive2 { name="trekfont"; version="0.9.3"; sha256="15p1r5q36fbajhwidjhhvvldckvz5js08w4cnj47gqr4lpmmpbx7"; depends=[]; }; - trelliscopejs = derive2 { name="trelliscopejs"; version="0.1.18"; sha256="1i13l3a74cxppkffzbpnyh2faqdwj3gy55s4s0fck1fwpvlkn5zr"; depends=[autocogs base64enc digest DistributionUtils dplyr ggplot2 gtable htmltools htmlwidgets jsonlite knitr progress purrr rlang tidyr webshot]; }; + trelliscopejs = derive2 { name="trelliscopejs"; version="0.2.4"; sha256="0dx4r31v1611yimqx9jh5ikrrk6ipz6dpqci7wxy3lbrcdsz0acq"; depends=[autocogs base64enc digest DistributionUtils dplyr ggplot2 gtable htmltools htmlwidgets jsonlite knitr progress purrr rlang tidyr webshot]; }; trelloR = derive2 { name="trelloR"; version="0.1.0"; sha256="0d549yw9pfxs8a3q716z08fzg68bkm5l09cv5iqqkm4gyasrxsf4"; depends=[dplyr httr jsonlite]; }; trend = derive2 { name="trend"; version="1.1.2"; sha256="09b6ycyfgs4xlhx6kn6qm5rl2acp58hzhv8qclzn3kb1wjjyvxy5"; depends=[extraDistr]; }; trendchange = derive2 { name="trendchange"; version="1.1"; sha256="19r0kmwsim78ynssyh6j0zd99cz96cacy3hmyrjabwwvz0f8sk3h"; depends=[]; }; @@ -14701,14 +14719,14 @@ in with self; { triebeard = derive2 { name="triebeard"; version="0.3.0"; sha256="1hqyz57gph02c9fdc07lxz113bbklif3g18sw8jan6pakhhdc7dz"; depends=[Rcpp]; }; trigpoints = derive2 { name="trigpoints"; version="1.0.0"; sha256="1hckjh2gb0fvd2c8x6mj0idpk3im7b831y7mbli1hqhry6qqdw15"; depends=[sf tibble]; }; trimTrees = derive2 { name="trimTrees"; version="1.2"; sha256="0v75xf5186dy76332x4w7vdwcz7zpqga8mxrb5all2miq2v45fi8"; depends=[mlbench randomForest]; }; - trimcluster = derive2 { name="trimcluster"; version="0.1-2.1"; sha256="0013bpyq6mkvjn38qsmwnsxfiwxgwngnqxycxvgpgmiadhm8fjmn"; depends=[]; }; + trimcluster = derive2 { name="trimcluster"; version="0.1-5"; sha256="12siv8yx8dcavsz8jk96lwscbj257ar8jpaxksl2zb06987g4fcj"; depends=[]; }; trimmer = derive2 { name="trimmer"; version="0.8.1"; sha256="0hn5pignj5clg7wb3xd0mh9jqc480wqxxymzaas68lxzi6p5mng9"; depends=[cli crayon data_table pryr]; }; trimr = derive2 { name="trimr"; version="1.0.1"; sha256="0gcn18nwxmax9c35is0nldyh74cw8rg3gj60cixzs9qjnpb9xx3d"; depends=[]; }; trinROC = derive2 { name="trinROC"; version="0.4"; sha256="02civ3r14hr6gbw6bdh77y00kiki6cdcv85hxk5g6n2nfspdr67r"; depends=[ggplot2 gridExtra rgl]; }; trioGxE = derive2 { name="trioGxE"; version="0.1-1"; sha256="1ra86l3i7fhb6nsy8izixyvm6z23shv7fcjmnnpil54995j15ax4"; depends=[gtools mgcv msm]; }; trip = derive2 { name="trip"; version="1.6.0"; sha256="089wwdbf3mqz2gxskr9pwi124qbmjf6s9gq7vfrjyhcbp4xx8hwp"; depends=[geodist glue maptools MASS raster sp spatstat viridis]; }; tripEstimation = derive2 { name="tripEstimation"; version="0.0-44"; sha256="1ylpyzlqr6l5haxq4icnlxw6vgvc2lsfz5sm2wqqm4m6h3p0i6s6"; depends=[lattice mgcv rgdal sp zoo]; }; - tripack = derive2 { name="tripack"; version="1.3-8"; sha256="0pf707z6xysxvcs508nadga3mglpvmfk6r061qda8acn58ll1cvb"; depends=[]; }; + tripack = derive2 { name="tripack"; version="1.3-9"; sha256="044cda8vg1mz9zlkhlxxz258qwmlr912zyrndbl14jw94c66fh1b"; depends=[]; }; tripsAndDipR = derive2 { name="tripsAndDipR"; version="0.1.0"; sha256="1gm96fxgql9y08w177nyxw0bahyafcs75maz743a9hfb0gjixvy2"; depends=[]; }; triversity = derive2 { name="triversity"; version="1.0"; sha256="1bar2bpy8jvj91jmzzdwy6rlvirsbxrzqnx4r825irqhc69gc53r"; depends=[data_tree Matrix]; }; tropAlgebra = derive2 { name="tropAlgebra"; version="0.1.1"; sha256="1idvhxhw2f6z8iq0nfdj6jmzy8913vid84rvln6rx2dkzw3s9wnl"; depends=[]; }; @@ -14728,17 +14746,16 @@ in with self; { trustedtimestamping = derive2 { name="trustedtimestamping"; version="0.2.6"; sha256="1rx7ypy331mq5ni5hxhqcfnicvwdgg9j2pm3aj097a5hhigibdrq"; depends=[digest httr jsonlite]; }; tryCatchLog = derive2 { name="tryCatchLog"; version="1.1.6"; sha256="0ik2y2ac771z9r0wb4av2xhr3xv36n4wcv8cqx0vid3wcmbl6prc"; depends=[]; }; tsBSS = derive2 { name="tsBSS"; version="0.5.5"; sha256="19i9raw3wiig66a84msqqwwxd9br4ayk108v7d9j78d0ynm6ki84"; depends=[boot forecast ICtest JADE Rcpp RcppArmadillo xts zoo]; }; - tsDyn = derive2 { name="tsDyn"; version="10-1.1"; sha256="1d79kjb63z63yddjmb2gs8ngjr3pdvrgla8pzdq9p06q041yvkhj"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; + tsDyn = derive2 { name="tsDyn"; version="10-1.2"; sha256="0wwp18qaxljdy1zqww1qw9fa9ycvgwcf6j52cpx3v2f2177x7snc"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; }; tsPI = derive2 { name="tsPI"; version="1.0.3"; sha256="00p7275iq8qn6c6dpqjr5s9fzc0a6njqqi9gvqnh5s9lfx9mbk1v"; depends=[KFAS]; }; tsSelect = derive2 { name="tsSelect"; version="0.1.8"; sha256="0ysijzhhwaj5n7h50jacshnla6d0h61q0f6lj19ic0lwvlz4yazy"; depends=[forecast]; }; tsallisqexp = derive2 { name="tsallisqexp"; version="0.9-3"; sha256="0mzqplsj2w4a7jnav43afyk8ymy6p444j7km6kc8c2g4aifpgxcb"; depends=[]; }; tsbox = derive2 { name="tsbox"; version="0.2.0"; sha256="0kyw276qi20801ps3kd61k1s4vs0znsyzzy8mwjq312cbjisg6mc"; depends=[anytime data_table]; }; tsc = derive2 { name="tsc"; version="1.0-3"; sha256="1acsdkxizlkix1sskwqv2a80rshw6f14zvcsjhrmmdfd4bmwh36y"; depends=[]; }; - tscount = derive2 { name="tscount"; version="1.4.1"; sha256="0bnzv06wxc1kzjlysljndsjimjsn3g8v6s1vbics1cwcs5jkjwr4"; depends=[ltsa]; }; + tscount = derive2 { name="tscount"; version="1.4.2"; sha256="15lvrglv4lq17g425s9lkcb3f04bk0322yl32648ysf7gp7lmdx5"; depends=[ltsa]; }; tsdb = derive2 { name="tsdb"; version="0.7-1"; sha256="0ngy897fmf48c7k54zq8lx2fyv45c0kzn3bxm5054ay2lkv02idz"; depends=[datetimeutils fastmatch zoo]; }; tsdecomp = derive2 { name="tsdecomp"; version="0.2"; sha256="1wy37gjp49dr60s4zhwv19iv3mzr1fjz5yilqmqgy78j5d45ns15"; depends=[]; }; - tsdf = derive2 { name="tsdf"; version="1.1-7"; sha256="1c6fmvbpwvzy654c7hs56nxdp27wy9vyb521rdw33mgxvnyjbjqn"; depends=[]; }; tsdisagg2 = derive2 { name="tsdisagg2"; version="0.1.0"; sha256="1vjypf9d4rdprpgxfsgpccn412kvar59v341ridq2hcdp7hfb70s"; depends=[]; }; tseries = derive2 { name="tseries"; version="0.10-47"; sha256="0yzvc9djp3angvxdxqi60wi726y76ablsb71q88ycvw0avgpf8r0"; depends=[quadprog quantmod zoo]; }; tseriesChaos = derive2 { name="tseriesChaos"; version="0.1-13.1"; sha256="0qfrrzd0h8n9zp7wj5fl88wkiv22fs5zy8x509g316j0avm5zjr3"; depends=[deSolve]; }; @@ -14749,17 +14766,18 @@ in with self; { tsfknn = derive2 { name="tsfknn"; version="0.3.0"; sha256="0h44s8bvnd68nhl0rbwvs0sycsjlmpnni0nr2169429a9y3f91f1"; depends=[ggplot2]; }; tsgui = derive2 { name="tsgui"; version="0.0.3"; sha256="16cx68gq2f63wx7mhbv0aq6pr71wfbc035kjbjjsfrbagaq4ib13"; depends=[RandomFieldsUtils tcltk2 tkrplot]; }; tsiR = derive2 { name="tsiR"; version="0.4.2"; sha256="1yc9kcyj8yg7zsdkqsxkr7czv3i5gf2146z5h89qfqifrrzmjifa"; depends=[ggplot2 kernlab reshape2]; }; - tsibble = derive2 { name="tsibble"; version="0.8.5"; sha256="1xm5zwx0p101gr4qf4yc1p33fhck44ppdk104pcwbhxwbza6mh3y"; depends=[anytime dplyr lifecycle lubridate purrr rlang tibble tidyselect vctrs]; }; + tsibble = derive2 { name="tsibble"; version="0.8.6"; sha256="1vm4rwfflrc87xj6sn8xa0lqdvs1k4hviar0glm9v0dhbk81bbbj"; depends=[anytime dplyr lifecycle lubridate purrr rlang tibble tidyselect vctrs]; }; tsibbledata = derive2 { name="tsibbledata"; version="0.1.0"; sha256="17qvjfkppg1z4pxgax37ikx2x28ib39syps5vhppc1y3yn8441vq"; depends=[tsibble]; }; tsintermittent = derive2 { name="tsintermittent"; version="1.9"; sha256="1mrb6yrsjwj6j40n97sgg42ddvwhjnaiq9k7ka249bbq01gf2975"; depends=[MAPA]; }; - tsmp = derive2 { name="tsmp"; version="0.3.5"; sha256="1gilzxxgaa1qqsk56s7ynlqhz6bssxrpc1h7fxkjp0z9amajvb5h"; depends=[audio doSNOW foreach magrittr progress]; }; + tsmp = derive2 { name="tsmp"; version="0.4.11"; sha256="1zgq84mwj2r1np98s94xdpij7q8q0cp2lr67q0jfcgzzjmdky9fj"; depends=[audio checkmate doSNOW foreach magrittr progress Rcpp RcppParallel RJSONIO]; }; tsna = derive2 { name="tsna"; version="0.3.1"; sha256="15dx5inmlk05asakjv3jzlycid307xjpy4x2h52phix69ghbb95v"; depends=[network networkDynamic statnet_common]; }; tsne = derive2 { name="tsne"; version="0.1-3"; sha256="0s8cv2pndkddq62rzlgzgfdjp1vjv5hz5i5957sllnb97vbzbzb6"; depends=[]; }; + tsnetwork = derive2 { name="tsnetwork"; version="1.2"; sha256="14rx2idlmsdik17fbzmdkgpj5jyrirga6cklhxflrbk9zjmlii00"; depends=[igraph longitudinal QUIC]; }; tsoutliers = derive2 { name="tsoutliers"; version="0.6-8"; sha256="02qd7ky416yp2l4cfl2yl7ckr2aidkps9cxkk03r9r7c5247c6zh"; depends=[forecast]; }; tspmeta = derive2 { name="tspmeta"; version="1.2"; sha256="028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd"; depends=[BBmisc checkmate fpc ggplot2 MASS splancs stringr TSP vegan]; }; tsqn = derive2 { name="tsqn"; version="1.0.0"; sha256="1iv1wwa6a9824dbgfk5a609szppc3a8j250z74hb8csjvwwx9qq9"; depends=[fracdiff MASS robustbase]; }; tstools = derive2 { name="tstools"; version="0.3.8"; sha256="0daxrp91hxc367hlzla0s7x5dddnx462239jcq0ickx6awkk753g"; depends=[data_table jsonlite xts zoo]; }; - tsutils = derive2 { name="tsutils"; version="0.9.0"; sha256="09xv5iv6icjbj5rhcsspbs8n2rl9k9gml0iizq8rd5a01153zlsm"; depends=[forecast MAPA RColorBrewer]; }; + tsutils = derive2 { name="tsutils"; version="0.9.2"; sha256="0gp8f0a9dn3h4lv38xiw04j832igwhfralzc5vd74r952x7b6hbx"; depends=[forecast MAPA plotrix RColorBrewer]; }; tsviz = derive2 { name="tsviz"; version="0.1.0"; sha256="099ga750kr9hrkd8vaxhz6h4gha6zfr9jzqwrmgms2h2h1a7jxr7"; depends=[dplyr forecast ggplot2 lubridate magrittr miniUI plotly shiny shinyhelper]; }; tsvr = derive2 { name="tsvr"; version="1.0.1"; sha256="1lkb6lj3lsx25d671gb804brbv74isrjbj9pd09q84qp7jgrpgyd"; depends=[]; }; tswge = derive2 { name="tswge"; version="1.0.0"; sha256="0wj0kyb1dcwfn8wjp7skgcflc48cr4va0i0jg8x970658if7z6fz"; depends=[astsa MASS PolynomF signal waveslim]; }; @@ -14770,7 +14788,6 @@ in with self; { ttbbeer = derive2 { name="ttbbeer"; version="1.1.0"; sha256="1azffcizm3460kxvrxxkilc6qxspyi247x8drrw5ywfichwhmdhc"; depends=[]; }; ttdo = derive2 { name="ttdo"; version="0.0.4"; sha256="1hq1s2rsngx496mhrf9pnpvp25805f17pfj7l0dm5g7lmiq24rr8"; depends=[diffobj tinytest]; }; ttestshiny = derive2 { name="ttestshiny"; version="0.1.0"; sha256="186569p9h3597z9lxyzm7fj8k6bzgm2kw757dcv2qhhf2k7nfch9"; depends=[dplyr shiny shinyAce shinyjs]; }; - tth = derive2 { name="tth"; version="4.3-2-1"; sha256="19rvmyprl1nk9mmngk6dax8rnli10msfvm3vzp86pbdjxnsh3hjc"; depends=[]; }; tttplot = derive2 { name="tttplot"; version="1.1.1"; sha256="0rmgp1888y07w0h8kwq1azpr6bysjq4pyjf6ygpra75jj4563wx9"; depends=[]; }; ttutils = derive2 { name="ttutils"; version="1.0-1"; sha256="18mk30070mcplybg320vjbk9v5flxnbqi5gx0yyr1z6ymjmnrxbc"; depends=[]; }; ttwa = derive2 { name="ttwa"; version="0.8.5.1"; sha256="1lhypcwssq0dspizvln3w4dg16ad6mz8cj4w34c5vsrayqid7fyn"; depends=[data_table]; }; @@ -14779,9 +14796,10 @@ in with self; { tuckerR_mmgg = derive2 { name="tuckerR.mmgg"; version="1.5.1"; sha256="0lrylh0np0kbl4xx3gmlvid0g11fh0ad39wdwbz6hrmf5pzsjdjq"; depends=[]; }; tufte = derive2 { name="tufte"; version="0.5"; sha256="0d3imnnrk4yq8la9n8sy2rlq30na8nbhfq2n5cc2k0pc2dg97jvj"; depends=[htmltools knitr rmarkdown xfun]; }; tufterhandout = derive2 { name="tufterhandout"; version="1.2.1"; sha256="04fvvbx69a28nk7i4wz5ynamz1yvsa2ibz542r1xaq1ikk0ywqbw"; depends=[knitr rmarkdown]; }; - tukeytrend = derive2 { name="tukeytrend"; version="0.6"; sha256="0lsxfpkim4fkrm2lrjhn3w55c0p694vbkal3mjqk6vnmnycg9d71"; depends=[lme4 Matrix mgcv multcomp nlme pbkrtest]; }; - tumblR = derive2 { name="tumblR"; version="1.1"; sha256="0gl6q6rff9bp21gvi3bz8kmwbhimxqrv1mmzwshl1ys9r7d4dvps"; depends=[httr RCurl RJSONIO stringr]; }; + tukeytrend = derive2 { name="tukeytrend"; version="0.7"; sha256="15j7g0drb92rpxq7d0jl9h0hxpi9pbgpvfcxaicrcgypxap3721q"; depends=[lme4 Matrix mgcv multcomp nlme pbkrtest]; }; + tumblR = derive2 { name="tumblR"; version="1.2"; sha256="1qili2c9wb6hpjjf7m0gyvdymzls5w4pghjkyi3sbp0q7ayhbh12"; depends=[httr RCurl RJSONIO stringr]; }; tumgr = derive2 { name="tumgr"; version="0.0.4"; sha256="1ylfmrsg177g75l2scjpgw6v4dpz62r7cy89pql9zd5zqy167xqj"; depends=[minpack_lm]; }; + tune = derive2 { name="tune"; version="0.0.1"; sha256="1nfhyw06wfgwx6gkvh5h1slhwk31nwplw16aqvk1ma5g1czg9k3n"; depends=[cli crayon dials dplyr foreach ggplot2 glue GPfit hardhat parsnip purrr recipes rlang rsample tibble tidyr workflows yardstick]; }; tuneR = derive2 { name="tuneR"; version="1.3.3"; sha256="0av978m4h2iqazyfq6n2cgkh4wpllihh7s29lah2nb8ngc0w5hxx"; depends=[signal]; }; tuneRanger = derive2 { name="tuneRanger"; version="0.5"; sha256="1xf78q8f7sq6w2jjwcw8vz88bmbp8yivydmqygjag58abnhd0356"; depends=[BBmisc DiceKriging lhs lubridate mlr mlrMBO ParamHelpers ranger smoof]; }; tuple = derive2 { name="tuple"; version="0.4-02"; sha256="0fm8fsdfiwknjpc20ivi5m5b19r9scdxhzij70l8qi3ixw1f0rnk"; depends=[]; }; @@ -14791,12 +14809,12 @@ in with self; { tutorial = derive2 { name="tutorial"; version="0.4.3"; sha256="0sxdlpw0w4azlaxdlk36ycrric6pbj2zi4nyv26pgsp0cr1hrx6r"; depends=[base64enc knitr markdown rjson]; }; tuts = derive2 { name="tuts"; version="0.1.1"; sha256="0mwc6lsnhxww041wh3020wz7w812asp1d6djv4n9pl7jil0kvkry"; depends=[coda doParallel foreach lomb mcmcplots rjags truncnorm]; }; tvR = derive2 { name="tvR"; version="0.3.1"; sha256="056a241m3c1jhf8idly1bm4xja349cg5yzz19l45zyggml82snin"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; - tvReg = derive2 { name="tvReg"; version="0.4.2"; sha256="1ma6jiqlj5jlsyk37vcddyv427xi8980cbplb40ppync18f7psmp"; depends=[bvarsv MASS Matrix systemfit vars]; }; + tvReg = derive2 { name="tvReg"; version="0.5.0"; sha256="17vbhny5dr62nwv30s15frdcdhcwk0hq7lwi3prpzyhl02bjhdyg"; depends=[bvarsv MASS Matrix plm systemfit vars]; }; tvd = derive2 { name="tvd"; version="0.1.0"; sha256="07al7gpm81a16q5nppsyc5rhv6zzkcvw72isx955b1q189v073aw"; depends=[Rcpp]; }; tvgeom = derive2 { name="tvgeom"; version="1.0.1"; sha256="1lr2vqgj5jfhzavwd43wcchhbicmf4dqjvyf66rvnjkw3jaig8dm"; depends=[]; }; tvm = derive2 { name="tvm"; version="0.4.0"; sha256="0v5b9s35q08a4z2ccph7g9q211w04x99sh72lrfby43fgl2jwyd1"; depends=[ggplot2 reshape2]; }; tvthemes = derive2 { name="tvthemes"; version="1.1.0"; sha256="0bc9li8vgmm4r6dshm52ll2d69gcynv1xrv8n7jhbyn7xmx3q3kz"; depends=[extrafont ggplot2 glue magick scales]; }; - twang = derive2 { name="twang"; version="1.5"; sha256="1sp1vb6l0mwpy9b9my5d3spc0q0zs7xg4dkmi4cl7hy7m9xy1dbk"; depends=[gbm lattice latticeExtra survey xtable]; }; + twang = derive2 { name="twang"; version="1.6"; sha256="0d190420igm1ai3gv9fjqxw6z1g7zrc4q3yidkn083mj42asxn4v"; depends=[gbm lattice latticeExtra survey xtable]; }; tweedie = derive2 { name="tweedie"; version="2.3.2"; sha256="10fv998qjxsyx0h94fi0xbh6xbf24nwgh254n9zfnmix9vk2cqls"; depends=[]; }; tweenr = derive2 { name="tweenr"; version="1.0.1"; sha256="0sq90pbln6lkc2q3zflhkxxwpqdw5dd7igrxhdnlynkdrmi83mpg"; depends=[farver magrittr Rcpp rlang]; }; tweet2r = derive2 { name="tweet2r"; version="1.1"; sha256="1ivzc05af3fbdxn99lcphm74qs64lz8577zzi6r52r9xjpsqpqzi"; depends=[ggmap ggplot2 maptools plyr rgdal ROAuth RPostgreSQL RSQLite sp spacetime spatstat splancs streamR]; }; @@ -14813,14 +14831,14 @@ in with self; { txtq = derive2 { name="txtq"; version="0.2.0"; sha256="1w4dmws2l0r5bbx2n2g79dfrpa8dz4hlg8raphgh8mimf1skfb3h"; depends=[base64url filelock R6]; }; types = derive2 { name="types"; version="1.0.0"; sha256="01shcin8wjbhbmzl979fj3008xqxssw90g3bjg42cnjxkmnaql59"; depends=[]; }; uCAREChemSuiteCLI = derive2 { name="uCAREChemSuiteCLI"; version="0.2.0"; sha256="1nccgkxv57inhgvgmhwm4fr8cp28sj8n83za5gam9xx1f42mzsqk"; depends=[ChemmineR usethis]; }; - uGMAR = derive2 { name="uGMAR"; version="3.2.2"; sha256="0p8n4wpqc7xqlsmr3gxspshfpfzh7zjrshqlnflszhrnngffgkif"; depends=[Brobdingnag pbapply]; }; + uFTIR = derive2 { name="uFTIR"; version="0.1.1"; sha256="0lpp768x87czdcb6gdgsp454faakx0gdmk9mh1zzh5ljzkxdvbxv"; depends=[raster Rcpp RcppArmadillo rgdal sp]; }; + uGMAR = derive2 { name="uGMAR"; version="3.2.3"; sha256="1wniaiysmv03rn8slgrxx32kbpic6mnbyhs0s4rcc081314130fk"; depends=[Brobdingnag pbapply]; }; uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; }; uaparserjs = derive2 { name="uaparserjs"; version="0.1.0"; sha256="1zhz39jrvi64sj0wvwkm4y8gakfp6kz1knw4wn08kk4fa9ymyjvq"; depends=[dplyr purrr V8]; }; uavRmp = derive2 { name="uavRmp"; version="0.5.4"; sha256="0djx6z9489pr03bf01y2d79ar840q4ffj39j72c8phz27yz40y04"; depends=[brew data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; }; - uavRst = derive2 { name="uavRst"; version="0.5-4"; sha256="0dd83xbzssvmqy0g053lzlkjpa7cpqiijsyi06qsk2krq4wp94ml"; depends=[foreach raster Rcpp]; }; ubiquity = derive2 { name="ubiquity"; version="1.0.1"; sha256="1aachql6k1fldfliv8gkny91rxca5h60is4cj98mizipc9cal7jz"; depends=[deSolve digest doParallel flextable foreach gdata ggplot2 gridExtra knitr MASS officer optimx PKNCA pso rhandsontable rmarkdown rstudioapi shiny stringr]; }; ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; }; - uchardet = derive2 { name="uchardet"; version="1.0.2"; sha256="1cyywm42ic2laal9clc0w6z2a8k4j21iz1vj903bxhxs940dv9n4"; depends=[Rcpp]; }; + uchardet = derive2 { name="uchardet"; version="1.0.5"; sha256="0cfmsa1ck9b3dbmyx1px2426ckwrgcc1f551vnqg490wrm26znsx"; depends=[Rcpp]; }; uclust = derive2 { name="uclust"; version="0.2.0"; sha256="1hvyrkah0yfia5wwr42q6axja56qwnils84pg25znq39fjly6hjf"; depends=[dendextend robcor]; }; ucminf = derive2 { name="ucminf"; version="1.1-4"; sha256="01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"; depends=[]; }; udapi = derive2 { name="udapi"; version="0.1.3"; sha256="0qyn6fdh8ia913hn2dl0x99xsm20ps8zm52snswlyb00prinm668"; depends=[curl httr]; }; @@ -14835,9 +14853,9 @@ in with self; { uklr = derive2 { name="uklr"; version="1.0.0"; sha256="1c1r7d76rjh9ki2fwhv8chmhc2j5kzv3d9lv7qvr1cxyfsbxrsfb"; depends=[httr jsonlite tibble]; }; ukpolice = derive2 { name="ukpolice"; version="0.1.2"; sha256="0jwc57360cr9fkqzs5j2jmnfagci86jzi6p5d5mpm35drsrzm1ca"; depends=[jsonlite purrr tibble]; }; ulid = derive2 { name="ulid"; version="0.3.0"; sha256="0xxkqrnlz3pkb3s1gacfzqav54w97gc0w8rh0fn1qy5rkmg2bplv"; depends=[Rcpp]; }; - umap = derive2 { name="umap"; version="0.2.4.1"; sha256="1pnh3hv8ihiz2nszqp797lkrdhhna2a6mzpizbsk0s9m8cj4wxva"; depends=[openssl Rcpp reticulate RSpectra]; }; + umap = derive2 { name="umap"; version="0.2.5.0"; sha256="0qp8zbh6fn8kn6q2h2lyjgmq3pr6gqwsd8ymqx25px13zjhxch9d"; depends=[openssl Rcpp reticulate RSpectra]; }; ump = derive2 { name="ump"; version="0.5-8"; sha256="1sg226caq9y41cwl7wr5s9z3bpq2j5p6rj6fy2pasbzimgzw0byx"; depends=[]; }; - umx = derive2 { name="umx"; version="3.0.5"; sha256="1xyv9xfqa5q5bzrrnqc07xi3y0kdlw9c1dy6dciqdcmynwkvidh2"; depends=[cowplot DiagrammeR ggplot2 knitr lavaan MASS Matrix MuMIn mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; }; + umx = derive2 { name="umx"; version="3.0.6"; sha256="0jbwmn8mj4ff2wzv3pwqf6ddhvbrm21n20ilj5h9fyjafcspfq9w"; depends=[cowplot DiagrammeR ggplot2 knitr lavaan MASS Matrix MuMIn mvtnorm nlme OpenMx polycor R2HTML RCurl xtable]; }; unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; }; unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; }; uncertainty = derive2 { name="uncertainty"; version="0.2.0"; sha256="1mq14ny7l3gy3wjsqijnm37azavyapxszjnckd861h4hgcpdcdjz"; depends=[mvtnorm triangle]; }; @@ -14846,6 +14864,7 @@ in with self; { unfoldr = derive2 { name="unfoldr"; version="0.7"; sha256="18qjsmlbqy9nhwyv288r9n3plv22fgb4g73jpyjyzy3hzfamcb17"; depends=[]; }; unglue = derive2 { name="unglue"; version="0.0.1"; sha256="0avk5d4dgbmqvmqlr5kbhg3qsyg5rxmw9icadivaahzf4znav5x4"; depends=[]; }; ungroup = derive2 { name="ungroup"; version="1.1.5"; sha256="0247mzicghdy2s41dsf1f2yx9j0j4qnahmh1bjaiwl4q1541k3l0"; depends=[MortalitySmooth pbapply Rcpp RcppEigen Rdpack rgl]; }; + unheadr = derive2 { name="unheadr"; version="0.2.1"; sha256="0pglf4sxq7f5rf1a87zz0nzjd4npdymazg4zpmmfiwc07lh8g7pr"; depends=[dplyr forcats magrittr readxl rlang stringr tibble tidyr tidyxl]; }; uniReg = derive2 { name="uniReg"; version="1.1"; sha256="0wjc7pgaisvk26j7grxp2ypsabb5my9wg6c9i5w9zhh5jdx1fdab"; depends=[DoseFinding MASS mvtnorm quadprog SEL]; }; uniah = derive2 { name="uniah"; version="1.0"; sha256="19zwy33gwa749i81mi9h05k8k3l4xbbln3k6q70fa7ic5lqbbdzj"; depends=[ahaz Iso survival]; }; unifDAG = derive2 { name="unifDAG"; version="1.0.3"; sha256="052qjrnj04imhj6i62k8jdx9rs8r70n0qrmd2z45x4fimn5py6j5"; depends=[gmp graph]; }; @@ -14855,60 +14874,59 @@ in with self; { unikn = derive2 { name="unikn"; version="0.2.0"; sha256="1lw3wn93bb8y76phnqwhvgn14zrs68rq8xx9hl2wbngispvwpwn1"; depends=[ggplot2]; }; unine = derive2 { name="unine"; version="0.2.0"; sha256="051dk8fss19h4d9815a7994krr1s3n5q0pxq9gir6zns0vvn05pw"; depends=[Rcpp]; }; uniqtag = derive2 { name="uniqtag"; version="1.0"; sha256="025q71mzdv3n1jw1fa37bbw8116msnfzcia01p1864si04ch5358"; depends=[]; }; + unisensR = derive2 { name="unisensR"; version="0.3.2"; sha256="0scqkbjlnln6vc9i0i3hpsx5mw6c8w22pc3dhy8bwyrjndcd54yy"; depends=[XML]; }; unitedR = derive2 { name="unitedR"; version="0.3.1"; sha256="06plbhjbn1gflpxarn21knhiwfr02vxprak9qcghl30fkkymd02r"; depends=[plyr]; }; - unitizer = derive2 { name="unitizer"; version="1.4.8"; sha256="1q2l32lkxv87vaih5wqfn6n2a2q6mlaw83mgrn4g5ircp5z3r98j"; depends=[crayon diffobj]; }; - units = derive2 { name="units"; version="0.6-5"; sha256="02nls8m0r1r7kljs4x35naz3szq62hyqyd5vracf1xwi1kz5kdsh"; depends=[Rcpp]; }; + unitizer = derive2 { name="unitizer"; version="1.4.9"; sha256="1p5isrc9vszfkx9z4fg02ag9cgw0qa8zwh20h7kwn0j1i40gdzzp"; depends=[crayon diffobj]; }; + units = derive2 { name="units"; version="0.6-6"; sha256="11x6xz1fbml28xmrhgn4sii9vfyj3gyfc1dfxahdg9cszdmcgdnh"; depends=[Rcpp]; }; unittest = derive2 { name="unittest"; version="1.4-0"; sha256="1wyiikccnkw8fzrjrb2a80lw2xyiii4zb0hrbzfszy2bd6prqxx4"; depends=[]; }; univOutl = derive2 { name="univOutl"; version="0.1-5"; sha256="193wrpkvgmlrx43nag8w3ivrlqm37nm6g86wcvd3bgw3hchs70gi"; depends=[Hmisc robustbase]; }; unival = derive2 { name="unival"; version="1.0.2"; sha256="1sw0z7dmicmka3znrc1c5v0s9g8cpqapacdjzl5i4k5ak2qq35qp"; depends=[optimbase psych]; }; univariateML = derive2 { name="univariateML"; version="1.0.0"; sha256="1l8b9fll93nhspbhrap94sdgdmligb49qlzvlm0x4msqmh085ib4"; depends=[actuar assertthat extraDistr logitnorm nakagami tibble]; }; - unix = derive2 { name="unix"; version="1.5"; sha256="0sgm1gzfkfilrsgmv567ld79azmfk076xl998sv139kh9dvwgsyx"; depends=[]; }; + unix = derive2 { name="unix"; version="1.5.1"; sha256="0kb54lgzqnp1nwl8lw2531qj3858szsv7wz17g6lqxkfxsww5vv8"; depends=[]; }; unjoin = derive2 { name="unjoin"; version="0.0.3"; sha256="08vjgl4dnh9kycrvdq5ngf57fy61n0nc582bi4znv06pq696rkwp"; depends=[dplyr rlang tibble]; }; - unmarked = derive2 { name="unmarked"; version="0.13-1"; sha256="1qg71jgdg9psbca8ki933x8g7r48rbbybq2ys8nj8pyhz89hgbkr"; depends=[lattice MASS Matrix plyr raster Rcpp RcppArmadillo reshape2]; }; + unmarked = derive2 { name="unmarked"; version="0.13-2"; sha256="07i0fiz155vs6cbhpg5gx77syf9phswhpz7vg3xxr16i0qdnh3h2"; depends=[lattice MASS Matrix plyr raster Rcpp RcppArmadillo]; }; unpivotr = derive2 { name="unpivotr"; version="0.5.1"; sha256="0j2q98xm3gg3mscn9ckl4pcihwc4p5gn4sk5sr1nqi4ghc047qaf"; depends=[cellranger dplyr forcats magrittr pillar purrr rlang tibble tidyr tidyselect xml2]; }; unrepx = derive2 { name="unrepx"; version="1.0"; sha256="1dzvwpza60y9p7kz1f0bm20wid5jyxx9pma4w41az9shq5kkr0aj"; depends=[]; }; unrtf = derive2 { name="unrtf"; version="1.4"; sha256="0ri68vfhc0acizjsk62v4l1g6l773y955yhcbqgks0vbrk01yfxg"; depends=[sys]; }; unsystation = derive2 { name="unsystation"; version="0.2.0"; sha256="02da7wzzk5bwd475i67v5x04ay2bn5yd5xffl1asqcqxcc5sy0m8"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; untb = derive2 { name="untb"; version="1.7-4"; sha256="1i7m4vfslsix98dwx4jlrsldm7fhhfp25gr7aapcxqxms7ryaby6"; depends=[Brobdingnag partitions polynom]; }; unvotes = derive2 { name="unvotes"; version="0.2.0"; sha256="0wanvivwm1nmqadq2vapg27kasnjnr0a4np2kw54wj9pg21izqic"; depends=[]; }; - updog = derive2 { name="updog"; version="1.1.3"; sha256="0dnvf205x39sb236652rsa2c9wlb8a6c93i8ldr2f9mhrhwndzbp"; depends=[assertthat doParallel foreach ggplot2 ggthemes Rcpp RcppArmadillo stringr]; }; + updog = derive2 { name="updog"; version="1.2.0"; sha256="0q55h4rgr0hqn2fkcnd0pwmrawzcjmffvysps1cr061jd5yrzla4"; depends=[assertthat doParallel foreach ggplot2 ggthemes Rcpp RcppArmadillo reshape2 stringr]; }; uplift = derive2 { name="uplift"; version="0.3.5"; sha256="11xikfmg6dg8mhwqq6wq9j9aw4ljh84vywpm9v0fk8r5a1wyy2f6"; depends=[coin MASS penalized RItools tables]; }; uplifteval = derive2 { name="uplifteval"; version="0.1.0"; sha256="1gnn40c47rpx40j210bz6fb48d70p6spv3drr8hd5b3vzfz6686c"; depends=[dplyr ggplot2 gridExtra whisker]; }; upmfit = derive2 { name="upmfit"; version="0.1.0"; sha256="0f0rk606v17abgw3mwlwihl6fsxprp44h2xbhv1675i18i36vbgx"; depends=[mcmcplots R2jags]; }; uptasticsearch = derive2 { name="uptasticsearch"; version="0.4.0"; sha256="19sf3zdj424pz4ms0xg4asplf2bczvhl8p22y13jna1g51xyv92a"; depends=[assertthat data_table futile_logger httr jsonlite purrr stringr uuid]; }; uptimeRobot = derive2 { name="uptimeRobot"; version="1.0.0"; sha256="1sbr0vs6jqcyxjbs7q45bsfdnp3bc59phw0h3fwajqq1cxjgzdww"; depends=[plyr RCurl rjson]; }; - upwaver = derive2 { name="upwaver"; version="1.2.1"; sha256="02yx4ijww084cxsjbf68l5zv0pf1hsqwqq8rgbc6rm3qp00v18a5"; depends=[assertthat httr rjson XLConnect xlsx]; }; uqr = derive2 { name="uqr"; version="1.0.0"; sha256="0f7isjfb5almp1zypxzw3lfkygkcixmg0xdsw0zznf61r6qhbqyr"; depends=[gtools Hmisc]; }; - urbin = derive2 { name="urbin"; version="0.1-8"; sha256="0nbcs4rjqdqmyq046kx3nnvaxxzi0rxcxjma11lpn4ws1wdm6bng"; depends=[]; }; urca = derive2 { name="urca"; version="1.3-0"; sha256="1akaqwf3fvvvx4sgfn641fd4sj51s0701pvfl6s5hnz2k0iwh732"; depends=[nlme]; }; urlshorteneR = derive2 { name="urlshorteneR"; version="1.1.2"; sha256="1gxyc9a81lsn72x7c29lz6k9k5ylqd0j65yhy2qj8lslnmg869vz"; depends=[assertthat httr jsonlite lubridate stringr]; }; urltools = derive2 { name="urltools"; version="1.7.3"; sha256="04x3my655dd287cbsszbnf75q0swmjlxxrblcsay7a8n3df3a830"; depends=[Rcpp triebeard]; }; uroot = derive2 { name="uroot"; version="2.1-0"; sha256="1hhq7ns2pyiziwx6sx7sb6445p3nynv7l04rksjngai2vpdaj0iw"; depends=[]; }; + ursa = derive2 { name="ursa"; version="3.8.16"; sha256="0w92l4pv92szj70d71js0cbmy2y7c054adpq5ghbiqrd9g1a5jc7"; depends=[jpeg png rgdal]; }; + usa = derive2 { name="usa"; version="0.1.0"; sha256="0scdrd6b48n019f7qp77rrkqgmapnrknalq0hml1cy7m43llqf6d"; depends=[tibble]; }; usdarnass = derive2 { name="usdarnass"; version="0.1.0"; sha256="10fh9anpmbb7i70q3hjxbplrkqa1q86zgh8nldsf2i526p62hpm1"; depends=[httr jsonlite readr]; }; usdm = derive2 { name="usdm"; version="1.1-18"; sha256="1sis47fri2lrbx2ll5ps7bvycjqhncnia800izf11szgayim5lrv"; depends=[raster sp]; }; - usedist = derive2 { name="usedist"; version="0.3.0"; sha256="11bklq2fzmk49rnmlrpjlf9qn4lzdzx52722wy0mfd3qsg9mpcbm"; depends=[]; }; + usedist = derive2 { name="usedist"; version="0.4.0"; sha256="0ddf1zcalbrn293qmr9kdzz3x16fzc4k1bwb1pjmwnspisqfi8kj"; depends=[]; }; useful = derive2 { name="useful"; version="1.2.6"; sha256="0n50v1q75k518sq23id14jphwla35q4sasahrnrnllwrachl67v1"; depends=[assertthat dplyr ggplot2 magrittr Matrix plyr purrr scales]; }; - usefun = derive2 { name="usefun"; version="0.4.1"; sha256="1fv10s73hk0xnwrigri9713bxa03jhrf8lafc110syihdj7d5kvx"; depends=[]; }; + usefun = derive2 { name="usefun"; version="0.4.3"; sha256="0vsz7kmkqfffw2jh33ag6h22qclxblf04aw82ss66j8xpxmkqhs6"; depends=[]; }; userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.7.2"; sha256="17arxxha8qr876nrf9szpymgamxlvacj3lfbmpiv973kyi3hr7m4"; depends=[BiasedUrn car data_tree DiagrammeR digest diptest GGally ggplot2 ggrepel ggridges GPArotation gridExtra gtable knitr lavaan lme4 MASS MBESS minpack_lm pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists ufs viridis XML xtable]; }; usethis = derive2 { name="usethis"; version="1.5.1"; sha256="07an5wbikilg7cb3q6x5aykw8dfqnjrc3wpfb7gjmy0d9fh20fcy"; depends=[clipr clisymbols crayon curl desc fs gh git2r glue purrr rlang rprojroot rstudioapi whisker withr yaml]; }; usfertilizer = derive2 { name="usfertilizer"; version="0.1.5"; sha256="05zjn39hqjjzzp4v4b1zbqq59205s7k0kikms951h57kbyvjz6vk"; depends=[tidyverse]; }; - ushr = derive2 { name="ushr"; version="0.2.0"; sha256="1jgkq87a90xg6dwrgv78flcprxw7na847ig8m4rkcnc084pyxv8w"; depends=[dplyr ggplot2 tidyr]; }; + ushr = derive2 { name="ushr"; version="0.2.1"; sha256="0jw7wc9nv3z81lzc90pb67xb5mfbdxyvi386p5s0hn8y19jimc1g"; depends=[dplyr ggplot2 tidyr]; }; uskewFactors = derive2 { name="uskewFactors"; version="2.0"; sha256="0ndi5987ak8sa7krgiglsibfg0k7z9j8fg47hg1m8ar0sq4r1yj6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; }; - usl = derive2 { name="usl"; version="2.0.0"; sha256="1bdbscz4mbmrdnfvvgncjsshmry9hab2jz09gqc2hdzcxnfvmsp0"; depends=[nlsr]; }; + usl = derive2 { name="usl"; version="3.0.0"; sha256="1ahry485kpzfc0pzi4zm039d5mpv1jycmhdpn0n0zn0drcrlhw0g"; depends=[nlsr]; }; usmap = derive2 { name="usmap"; version="0.5.0"; sha256="0fjmmw8xhba31gv8mx9k55881yb94z518csbqas3bvssq5s7048f"; depends=[]; }; ustyc = derive2 { name="ustyc"; version="1.0.0"; sha256="1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4"; depends=[plyr XML]; }; utc = derive2 { name="utc"; version="0.1.5"; sha256="1lhm5rhr78cxp3cz5n6j2zkhjphj7csk026xvvhkjqdi39rrq6i4"; depends=[]; }; utf8 = derive2 { name="utf8"; version="1.1.4"; sha256="0m0ywg8k3blfiahxvh1i4zn9dksrlc937d2lbza5fc38zjnrrnpn"; depends=[]; }; utile_tables = derive2 { name="utile.tables"; version="0.1.8"; sha256="0zxy5y8d34lssg5jr7hzqkwf92k3yy52p1qjd505zrp90sgz9cjj"; depends=[dplyr purrr rlang survival tibble utile_tools]; }; - utile_tools = derive2 { name="utile.tools"; version="0.2.3"; sha256="0jlyrd7a96gpvs6i62smg4mcds9660y65lykqjs0dvm42c1j0823"; depends=[dplyr lubridate purrr rlang stringr tibble]; }; + utile_tools = derive2 { name="utile.tools"; version="0.2.4"; sha256="1k82wra9c6f8m58sk1m33fv0gqjnxnv5wal8rjx6knnvfl36kjvn"; depends=[dplyr lubridate purrr rlang stringr tibble]; }; utile_visuals = derive2 { name="utile.visuals"; version="0.2.3"; sha256="1748nbj2vzigw0q97z9c6pgxa9x8h9rllh8asaahdybachwal7kh"; depends=[dplyr ggplot2 gridExtra purrr utile_tools]; }; - utility = derive2 { name="utility"; version="1.4.4"; sha256="18ariimhlmh4gi01jdywidk3gwfcm2yhl4d0dbr8ymdxlg1f1w8g"; depends=[]; }; + utility = derive2 { name="utility"; version="1.4.5"; sha256="0a11bxyg8la6yvxr04qbhay05jb2ihd7calc1zcisgj43kq6k7xd"; depends=[]; }; utilsIPEA = derive2 { name="utilsIPEA"; version="0.0.6"; sha256="07avc0j6qkzqmznbydn0zdg743g7g7kn2bcx5n03m3wg0fqyggr7"; depends=[data_table dplyr RCurl stringdist stringr]; }; - utiml = derive2 { name="utiml"; version="0.1.5"; sha256="02wxsg1gg2y83cii5ly7r8lk376kas261f9qyl03z55p5m72w9zy"; depends=[mldr ROCR]; }; - uuid = derive2 { name="uuid"; version="0.1-2"; sha256="1gmisd630fc8ybg845hbg13wmm3pk3npaamrh5wqbc1nqd6p0wfx"; depends=[]; }; - uwIntroStats = derive2 { name="uwIntroStats"; version="0.0.7"; sha256="0lihcjd79sqnw64bd2d4p02rl7fmzpyykrdi7b5dsnnwjhr0ks6r"; depends=[Exact geepack plyr sandwich survival]; }; - uwot = derive2 { name="uwot"; version="0.1.5"; sha256="0pz9wa89xq4d119q86lskrznf979m0r1db8iaprcz7kxbi6b8lrj"; depends=[dqrng FNN irlba Matrix Rcpp RcppAnnoy RcppParallel RcppProgress RSpectra]; }; - vMask = derive2 { name="vMask"; version="1.0"; sha256="14zfmgidlvlmm9anjcz3wvz4crc24ysq7jj1j1078fp7px5vvr8z"; depends=[]; }; + utiml = derive2 { name="utiml"; version="0.1.6"; sha256="1djagxmsni685ps0nhbvwgncxj883qck0wfcwhrl5h714zq39a0j"; depends=[mldr ROCR]; }; + uuid = derive2 { name="uuid"; version="0.1-4"; sha256="0gm9ii7ncvllxbvyk6srsiinjmqyj7lmh84w43x4nhqpvafj9q4q"; depends=[]; }; + uwot = derive2 { name="uwot"; version="0.1.8"; sha256="1jzh8r1h6f7pw7pb1fr32vn6ai9g10s56ahkq0vi77iznihy1rpd"; depends=[dqrng FNN irlba Matrix Rcpp RcppAnnoy RcppProgress RSpectra]; }; vaersNDvax = derive2 { name="vaersNDvax"; version="1.0.4"; sha256="0hvw7vbxs87c9xkdv3617fkjwz2dbawscbd7dgaixhdhcr3k823a"; depends=[]; }; vaersvax = derive2 { name="vaersvax"; version="1.0.5"; sha256="0bfbpdjnykvb9r0p28bz8lrqxksy4jvwnd28y6gdlprpisiipiic"; depends=[]; }; vagalumeR = derive2 { name="vagalumeR"; version="0.1.6"; sha256="0zakpg5p9kif61d35as08f2dac3wncyvhpc83rqjp96g99wjf701"; depends=[dplyr httr jsonlite magrittr purrr stringr]; }; @@ -14919,18 +14937,17 @@ in with self; { validann = derive2 { name="validann"; version="1.2.1"; sha256="00c0hkjiv8n7mksx6sknb4xkkivxr1ml31k697csv4imwrk09dy5"; depends=[moments]; }; validate = derive2 { name="validate"; version="0.9.3"; sha256="0ckr4i75w503jxwghkmc7mi9b9z54gjipxl6limz4sry0py3lyl4"; depends=[settings yaml]; }; validateRS = derive2 { name="validateRS"; version="1.0.0"; sha256="1ivw9ddr6z2wrsqvhbn87p5pikhkxlz8p45pb5nq13dvs359vkww"; depends=[data_table reshape2 triangle truncnorm]; }; - validatejsonr = derive2 { name="validatejsonr"; version="1.0.4"; sha256="1n8jf7j3hvz47z1x3gqz5yj5wxfjzz0zgzkgckdvy1nbsqf7w3cr"; depends=[Rcpp]; }; - validatetools = derive2 { name="validatetools"; version="0.4.7"; sha256="0pqy76gpn0z20f6bpbnv0ryjb8p4x5j821a46ld19r9lvp7a9rrr"; depends=[lpSolveAPI validate]; }; + validatetools = derive2 { name="validatetools"; version="0.5.0"; sha256="10wardp2c70zx5ii940sjql3xh5p3vqxv4ayyifhhlr8vzvr5cj0"; depends=[lpSolveAPI validate]; }; valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; }; valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; valr = derive2 { name="valr"; version="0.5.0"; sha256="14jhrwkiwmha3vlmm7b50n2xxyizj6ddmy89gb20mpzq7qhz1ika"; depends=[broom dplyr ggplot2 Rcpp readr rlang stringr tibble]; }; valueEQ5D = derive2 { name="valueEQ5D"; version="0.5.1"; sha256="0njarifqj7mfnc5bqaq7zpx0z7sx9rmz88755s7426dyypx8v0lv"; depends=[rstudioapi testthat]; }; valuer = derive2 { name="valuer"; version="1.1.2"; sha256="0mbwzsvy34ppngyxdzpd9w1r4f00cik4maqab9kpiflrrv9xdp78"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; - vamc = derive2 { name="vamc"; version="0.1.1"; sha256="0mpn7vp7kc19zbnviah18r972vpw2q5l884xvjkyn23gsib1scvg"; depends=[Rdpack]; }; - vampyr = derive2 { name="vampyr"; version="1.0.5"; sha256="0hnxgl2cp3scnazr7fnjgzfz5ihfzs5gwbsb6jlq569d6il9jjl7"; depends=[corpcor EFA_MRFA fungible GPArotation lavaan moments optimbase PCovR psych]; }; + vamc = derive2 { name="vamc"; version="0.2.1"; sha256="04kkli4xzf3gzvs215lzch8bl877cdq3awh3mz1k321zhsa1d0jn"; depends=[Rdpack]; }; + vampyr = derive2 { name="vampyr"; version="1.0.6"; sha256="1iqlb948wvwxf69588qz0hmc1fsmbqp058qbvrzx817w3mhjcs63"; depends=[corpcor EFA_MRFA fungible GPArotation lavaan moments optimbase PCovR psych semPlot]; }; vanddraabe = derive2 { name="vanddraabe"; version="1.1.1"; sha256="094kd72slq0n3pk0p6zps241aszb9yql49h4mr007zf0kn8wlf8v"; depends=[bio3d cowplot fastcluster ggplot2 openxlsx reshape2 scales]; }; vanquish = derive2 { name="vanquish"; version="1.0.0"; sha256="01di1j36npl7vnyhgsagvyf6j8bxcw867dwf9dgi7l1328s7lf0l"; depends=[changepoint e1071 ggplot2 VGAM]; }; - vapour = derive2 { name="vapour"; version="0.4.0"; sha256="0vv8vd5gkhf7vjicm1r3c6liibgvdfnm030b1p7fm71jb7ycg49p"; depends=[Rcpp]; }; + vapour = derive2 { name="vapour"; version="0.5.0"; sha256="06rjqvriz64f7w5b5xwn3n5xk27l3p2l1sgipzjkk04gs24m6nfh"; depends=[Rcpp]; }; varEst = derive2 { name="varEst"; version="0.1.0"; sha256="0i6nsxl5w4zipzrmdvx8plmxr33n405w2qhks3s7zzs3kcys32v6"; depends=[caret glmnet lm_beta SAM]; }; varImp = derive2 { name="varImp"; version="0.3"; sha256="08kqnqv29bmw2lqnsyffnbwr3a0f97mf593pkwzak6wy0mkqrm5z"; depends=[measures party]; }; varSel = derive2 { name="varSel"; version="0.1"; sha256="0ddj3swfxzchs75kfi6h25h3c33hpapnd5kcwcijnqhlh902b1r0"; depends=[]; }; @@ -14942,27 +14959,29 @@ in with self; { varclust = derive2 { name="varclust"; version="0.9.4"; sha256="0knmfq3pn38j8p29j6sqapdv3g5335si3gwiw932ml5z49a8ga5m"; depends=[doParallel doRNG foreach pesel RcppEigen]; }; vardiag = derive2 { name="vardiag"; version="0.2-1"; sha256="07i0wv84sw035bpjil3cfw69fdgbcf2j8wq4k22narkrz83iyi2z"; depends=[]; }; vardpoor = derive2 { name="vardpoor"; version="0.16.0"; sha256="09dy1q1lx3b53an7qdszqzl5r4aswddy3046cvz997k1f692mwda"; depends=[data_table foreach ggplot2 laeken MASS plyr pracma stringr surveyplanning]; }; - varhandle = derive2 { name="varhandle"; version="2.0.4"; sha256="17hvn991268xdfmxx9a03k04zy9gbd4jihyl0750pm3flsldarrl"; depends=[]; }; - variables = derive2 { name="variables"; version="1.0-2"; sha256="02q1fyd7r0xclvwbiqz07dr6y5g2sqfjj1qv5hvvhs0vmx93w7f9"; depends=[]; }; + varhandle = derive2 { name="varhandle"; version="2.0.5"; sha256="1l42d0s6fbjjc9l28a2m3myxkrx2c0p0b9yj8wjjjgilw19yc3lv"; depends=[]; }; + variables = derive2 { name="variables"; version="1.0-3"; sha256="1x4w6pqrl6lw5dalii7kiq5f7jbfj1mlwdq2f6bvyfpx8byrvkqc"; depends=[]; }; varian = derive2 { name="varian"; version="0.2.2"; sha256="0jyw46qx2w19h02mrwv3w3n8qc1n4b3ckm38qly1y4a4w9ib6c2i"; depends=[Formula ggplot2 gridExtra MASS rstan]; }; variantspark = derive2 { name="variantspark"; version="0.1.1"; sha256="13hkp6l64hi7xlll09gin7kdlkqrkn0lggrw8147zy9ivhknhk59"; depends=[sparklyr]; }; - variosig = derive2 { name="variosig"; version="0.3"; sha256="0pffkhxkxp1bmyqdvwixfw8kqdvf0p4c9ff44cbhnc8lcyv5qpj2"; depends=[geoR gstat sp testthat]; }; + variosig = derive2 { name="variosig"; version="0.3-1"; sha256="09cxigii0sj78yqd18p4mm9jjqvd1k2cgjy43pxpmqdhia0q2pmv"; depends=[gstat sp testthat]; }; + varitas = derive2 { name="varitas"; version="0.0.1"; sha256="1xndg2hj4g3c7r4pzvjg7phrr1absa4xkpjc7gqfq45ymb3kadxz"; depends=[assertthat doParallel dplyr foreach magrittr openxlsx stringr tidyr VennDiagram yaml]; }; varjmcm = derive2 { name="varjmcm"; version="0.1.0"; sha256="02l0d896faakh9pdq2rzl2psmrj7l2pvacz7nk3r6552glsk7h18"; depends=[expm jmcm MASS Matrix]; }; - varrank = derive2 { name="varrank"; version="0.2"; sha256="19c40wwiadyqwn4z7nd22ynpa4wxr2anr2487mllmpg1d7wz3y38"; depends=[FNN]; }; + varrank = derive2 { name="varrank"; version="0.3"; sha256="0k7hz61ymxf7w2hh1v2yfb6qdjn68a8ckjfiw0jqqhjx4wh5crn7"; depends=[FNN]; }; vars = derive2 { name="vars"; version="1.5-3"; sha256="0zc6v827ll19n088n31afgjf65zqwvyzmmj4q3ab1xhqzxfsgbw6"; depends=[lmtest MASS sandwich strucchange urca]; }; varsExplore = derive2 { name="varsExplore"; version="0.1.0"; sha256="1sscz565i288nmk7sv03kj2xysfppvil4nl2lxxbvp3y4mrkz09b"; depends=[dplyr DT glue magrittr purrr rio rstudioapi stringr tidyr]; }; - varycoef = derive2 { name="varycoef"; version="0.2.9"; sha256="1hc6w5bmmp98bnly7wyb10ljdsfl40xy2i60lmrask93zk80br7f"; depends=[fields RandomFields sp spam]; }; + varycoef = derive2 { name="varycoef"; version="0.2.10"; sha256="1gdny45zn1s492sx85aa8z86yfh2fwl9krq5kmmgxgmwy5gz0rjz"; depends=[fields optimParallel RandomFields sp spam]; }; vaultr = derive2 { name="vaultr"; version="1.0.2"; sha256="1b7g0jplp5dw1img7d6wm75gaycb3z8a8mzc6s0iwvhbfl8vf574"; depends=[getPass httr jsonlite R6]; }; vbdm = derive2 { name="vbdm"; version="0.0.4"; sha256="1rbff0whhbfcf6q5wpr3ws1n4n2kcr79yifcni12vxg69a3v6dd3"; depends=[]; }; vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; }; - vcd = derive2 { name="vcd"; version="1.4-5"; sha256="0pqf1sdp0d60aqc7721hy2zfcp57902by0i28jqbn683dd50c21a"; depends=[colorspace lmtest MASS]; }; + vcd = derive2 { name="vcd"; version="1.4-6"; sha256="0rjz49py5l6wnaimw6k8rcyzlvs8cyz5g2xwqj2qis92ly0l103z"; depends=[colorspace lmtest MASS]; }; vcdExtra = derive2 { name="vcdExtra"; version="0.7-1"; sha256="163x9hhvhgdmrqbcig7b120lk63svy0y652scbrcb11f85zrgb0c"; depends=[ca gnm MASS vcd]; }; - vcfR = derive2 { name="vcfR"; version="1.9.0"; sha256="0rz25ldy475m43mc5rmvy8yvgspf3pwb154h4jbk2nlk12473d0x"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble vegan viridisLite]; }; + vcfR = derive2 { name="vcfR"; version="1.10.0"; sha256="13dfg42c7z0129difxd7phw8gbnck8gq4xd218r626wq7jrch6cy"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble vegan viridisLite]; }; vcov = derive2 { name="vcov"; version="0.0.1"; sha256="1w89mr8dk6436bxap28rszajgm9k7sjfqsr1i4p68dlhw8zk4yq1"; depends=[]; }; - vcr = derive2 { name="vcr"; version="0.4.0"; sha256="1fy48j5ky271x5a41xrba290nqbzhpqizbl8lg8sxhlr8l30pi62"; depends=[base64enc crul httr lazyeval R6 urltools webmockr yaml]; }; - vcrpart = derive2 { name="vcrpart"; version="1.0-2"; sha256="1xfvsxgyf39d2qxnm40nzkqp7q12y8nbpn9h154n876zxxfs7gh1"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; - vctrs = derive2 { name="vctrs"; version="0.2.2"; sha256="008xjmlj5a5vm303wxac7bliamqwaj7mcj0jv6n9ibc8p8h93aqd"; depends=[digest ellipsis glue rlang]; }; + vcr = derive2 { name="vcr"; version="0.5.0"; sha256="16pgzwiqvwgp1w5c4pggzr0lmnbdz0nk99n221a16p34j2wd7bq3"; depends=[base64enc crul httr lazyeval R6 urltools webmockr yaml]; }; + vcrpart = derive2 { name="vcrpart"; version="1.0-3"; sha256="10898qp3sh2cjcfz4ac2q98f3z2wmwd3zvhhcdlxw7xy5a1x8gib"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; + vctrs = derive2 { name="vctrs"; version="0.2.4"; sha256="15sgzs6afvmhssk6jcg41rn3bvmzmbm4sgca6f6x8lfrsazvdj6w"; depends=[digest ellipsis glue rlang]; }; vcvComp = derive2 { name="vcvComp"; version="1.0.1"; sha256="1103hjzd29f8gpsfbagdryq52m6fkhhh9dbqhbmhixxlimc7sd03"; depends=[]; }; + vdar = derive2 { name="vdar"; version="0.1.1"; sha256="1pxrsmvzn7626ikcwl4dz8lchbg2fr6ww6yjndx50iigb0q3dvbi"; depends=[compositions MASS]; }; vdg = derive2 { name="vdg"; version="1.2.0"; sha256="1hi5d14nh9q784sbdk018awrawh9f1aix0wl26x7n0xb4707rcmy"; depends=[ggplot2 gridExtra proxy quantreg]; }; vdiffr = derive2 { name="vdiffr"; version="0.3.1"; sha256="1l0vzh7nnwr64cq0nixnr4m0iya4mdpqvh45g2wf1hja51mcvw0a"; depends=[BH devtools diffobj fontquiver freetypeharfbuzz gdtools glue htmltools htmlwidgets purrr R6 Rcpp rlang shiny testthat usethis xml2]; }; vec2dtransf = derive2 { name="vec2dtransf"; version="1.1"; sha256="029xynay9f9rn0syphh2rhd3szv50ib4r0h0xfhhvbbb37h5dc9s"; depends=[sp]; }; @@ -14978,9 +14997,8 @@ in with self; { vegetarian = derive2 { name="vegetarian"; version="1.2"; sha256="15ys1m8p3067dfsjwz6ds837n6rqd19my23yj8vw78xli3qmn445"; depends=[]; }; vegperiod = derive2 { name="vegperiod"; version="0.2.6"; sha256="0v8bpxaa0xp8ywnycxs3613scncrhv8g7p99j6n5hs26m4h1km49"; depends=[]; }; vegtable = derive2 { name="vegtable"; version="0.1.5"; sha256="04q1dl4p12r4a05nhrlpzy4f5jw6i49ydaq5xrd84x1n6cc5qar9"; depends=[foreign plotKML qdapRegex sp stringi taxlist vegdata]; }; - vein = derive2 { name="vein"; version="0.8.5"; sha256="17a81x2c9mv9df1l4znw5rmjlb17qaicprkirfpgr5n1m6mnlx6s"; depends=[data_table eixport sf sp units]; }; + vein = derive2 { name="vein"; version="0.8.8"; sha256="1d1aszmfz0g6vd80v1rf0lh7v84g0kh9g86jns7ryjjfqn13yl9y"; depends=[data_table sf units]; }; velociraptr = derive2 { name="velociraptr"; version="1.1.0"; sha256="0a67vmv05cxc9f27aqzr6nkgy2mj3fhykwj5nb23qwfqa669a5hi"; depends=[sf]; }; - velox = derive2 { name="velox"; version="0.2.0"; sha256="1jrarfsfflvpc0dqh5gnw92fk8zic222n7pr7hd0lhr5d389k6d0"; depends=[BH raster Rcpp rgdal rgeos sf sp]; }; vembedr = derive2 { name="vembedr"; version="0.1.3"; sha256="0zg6j0g9l7j36ifwabhxrin5z0dics66bqkc7x6rqijmizk1xpba"; depends=[htmltools httr magrittr stringr]; }; venn = derive2 { name="venn"; version="1.9"; sha256="0d2vwjc932q8n9hww8krj7nixg1dfkmcw1k1cry2d0xdvbbnrj8r"; depends=[admisc]; }; venneuler = derive2 { name="venneuler"; version="1.1-0"; sha256="10fviqv9vr7zkmqm6iy2l9bjxglf2ljb7sx423vi4s9vffcxjp17"; depends=[rJava]; }; @@ -14990,11 +15008,11 @@ in with self; { vertexenum = derive2 { name="vertexenum"; version="1.0.2"; sha256="16ywz3z1kzhb3knhhi2i5igm3djdaaxyyrw69wkc5saa7ayhdb4y"; depends=[numbers]; }; vesselr = derive2 { name="vesselr"; version="0.2.1"; sha256="1wzprnpiv04gxhqgki36gp1a0xj9l3mchllphwkfsdja4axq3prk"; depends=[oro_nifti pbapply pbmcapply]; }; vetools = derive2 { name="vetools"; version="1.3-28"; sha256="1470xgqdq9n5kj86gdfds15k3vqidk3h99zi3g76hhyfl8gyl1c0"; depends=[lubridate maptools plyr scales sp stringr tis xts]; }; - vetr = derive2 { name="vetr"; version="0.2.8"; sha256="069vq4ysywakbnpa0cx711a7w6bhc4k3hr7rnsx8y4ji552ysji1"; depends=[]; }; + vetr = derive2 { name="vetr"; version="0.2.9"; sha256="1dqlv1ks3bfqz6hrl3q913i7sbf9430ix5pjjyl7db0452lhny3a"; depends=[]; }; vfcp = derive2 { name="vfcp"; version="1.4.0"; sha256="0zj1ihqdx5x1695al1xyi8k001yw8x7gdss72myxlnh7b4flnp9m"; depends=[copula extraDistr stringr]; }; vfprogression = derive2 { name="vfprogression"; version="0.7.1"; sha256="0kgw1jx0rl9v8qy8qg7zjzdgvwqdi7k1lsvsx3lnpw4sfpkzsq23"; depends=[]; }; vhcub = derive2 { name="vhcub"; version="1.0.0"; sha256="04a8hdm4pxl8fzwy9q2wqc9q0dl5r49xwbid70yj9qlflh683id0"; depends=[Biostrings coRdon ggplot2 seqinr stringr]; }; - vhica = derive2 { name="vhica"; version="0.2.4"; sha256="0km49lrzn9rm3wxadwxc290dvx3bsblbmna7f9lnkq6g1z5jdqwg"; depends=[]; }; + vhica = derive2 { name="vhica"; version="0.2.7"; sha256="0zz4sffhrvh9raxygxma5a2jijq8nw8wqg8bc486sd2ahlv8g3s8"; depends=[]; }; viafr = derive2 { name="viafr"; version="0.1.0"; sha256="14y5k1vskfzxfpzjkk9602p8mvvyfrf3qpr517zdb714wv3gwk3h"; depends=[assertthat crul dplyr jsonlite magrittr purrr rlang stringr tibble tidyr utf8]; }; vici = derive2 { name="vici"; version="0.5.2"; sha256="0qad8ab04ndd29kcmd388piiymablfc7xlv6iml4sxkid7z5kgby"; depends=[cowplot DT ggplot2 ggpubr nlme shiny tidyr]; }; vietnamcode = derive2 { name="vietnamcode"; version="0.1.1"; sha256="0vc0c1fg30afar2dkch5h27b8jbglcd9ja6d5hcypnibqz4c68vz"; depends=[]; }; @@ -15010,6 +15028,7 @@ in with self; { viridis = derive2 { name="viridis"; version="0.5.1"; sha256="060rf1jn29dq53y3nhb0hykvcap6rqsk04rq544ypiiqb18ngwnx"; depends=[ggplot2 gridExtra viridisLite]; }; viridisLite = derive2 { name="viridisLite"; version="0.3.0"; sha256="1by2l05f0yabwvv64lhnv7bbhx0w683s3wr9j2xda920ghpa23kq"; depends=[]; }; viromeBrowser = derive2 { name="viromeBrowser"; version="1.0.0"; sha256="0adyf6ssi0ph7x880inj1vfmpjfbsaavjavjnrpr9cb6p0qdmvyc"; depends=[Biostrings data_table DT ggplot2 markdown plyr rbokeh reshape Rsamtools shiny shinycssloaders shinydashboard shinyWidgets stringr]; }; + virtualNicheR = derive2 { name="virtualNicheR"; version="1.0"; sha256="1ya1nd30vm7kjc4468ra8fjyxdwq2i1l1lmajhqjvw0nsj0mh1bl"; depends=[devtools diptest]; }; virtualPollen = derive2 { name="virtualPollen"; version="1.0.0"; sha256="16q1smwh3ryids3pa7lb4i4pxmjjyl449w6fikkrm9ybj1k8gfcf"; depends=[cowplot ggplot2 mgcv plyr tidyr viridis]; }; virtualspecies = derive2 { name="virtualspecies"; version="1.5.1"; sha256="0l86awcjq6i1lqax596xy5qfmzwiz3cwp2rczvgg37fdrym97cm3"; depends=[ade4 raster rworldmap sp]; }; virustotal = derive2 { name="virustotal"; version="0.2.1"; sha256="0lky75al8zcvmfgx7a2s3bij8ya4avdsnv046lk7564zfd8rbymw"; depends=[httr plyr]; }; @@ -15017,7 +15036,7 @@ in with self; { visTree = derive2 { name="visTree"; version="0.8.1"; sha256="1l07zfr2hagjpdxfw5290wa3ki4bl7iqxrrhda0d1bp3wmwfz0ai"; depends=[colorspace partykit rpart]; }; visdat = derive2 { name="visdat"; version="0.5.3"; sha256="1ikqp29nncbw1xlwyb9dqqgcdk9q0bs3wxhnhnjpb11vcjv7cz2j"; depends=[dplyr ggplot2 glue magrittr purrr readr tibble tidyr]; }; visit = derive2 { name="visit"; version="2.1"; sha256="0kkspih7m18g5pqlwrxpgjdwqxpp23c3xyvcnvv247abl9aq81rd"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders]; }; - visreg = derive2 { name="visreg"; version="2.6-0"; sha256="0an58wrgn8qxmigc3nvykvglh41asdz8bn4zrzpg34dxiqykqb4b"; depends=[lattice]; }; + visreg = derive2 { name="visreg"; version="2.6.1"; sha256="01k44nxxilz7yrw5rihsg4r49yqjmz4zxmafcq89zbygap1d68ay"; depends=[lattice]; }; vistime = derive2 { name="vistime"; version="0.9.0"; sha256="1apyjapxqm05mlr4bx7s2x5v9ji8z8jb3spkrwcs0fibd6bq1dbb"; depends=[assertive plotly RColorBrewer]; }; vistributions = derive2 { name="vistributions"; version="0.1.1"; sha256="1s68dpcy55v6yw7ivh2xpshz6qc0qaifjd15h7rjg3zl1cx81mh3"; depends=[ggplot2 magrittr shiny]; }; visualFields = derive2 { name="visualFields"; version="0.6"; sha256="1w6wkyzjakj6ss9nv4gzkgva4m21jbsz10c2jy660bjb25rf59ih"; depends=[deldir flip gtools Hmisc matrixStats spatstat]; }; @@ -15026,7 +15045,7 @@ in with self; { vita = derive2 { name="vita"; version="1.0.0"; sha256="114p2lzcr8rn68f0z4kmjdnragqlmi18axda9ma4sbqh8mrmjs9v"; depends=[randomForest Rcpp]; }; vitae = derive2 { name="vitae"; version="0.2.1"; sha256="053dy7c5zlrdb3hcbbdndx61ahkd2xwgl0i3ivcxwladyrkksyz3"; depends=[bookdown dplyr glue knitr RefManageR rlang rmarkdown xfun]; }; vitality = derive2 { name="vitality"; version="1.3"; sha256="17micfmlksnw167vavvhlk431fm20k74y5ggs47pgz5fwpm854zp"; depends=[]; }; - vivo = derive2 { name="vivo"; version="0.1.1"; sha256="0qqzlf1hhalbblx6qsl1i9s4l7hybdpd5xpwjwcv4zgjizvzgbpx"; depends=[DALEX dplyr ggplot2 ingredients]; }; + vivo = derive2 { name="vivo"; version="0.1.2"; sha256="1wd38vkb0qw8hcv9x4vsb0dg0dbqcnzfgpdzzanfbsn9hg1gswd7"; depends=[DALEX dplyr ggplot2 ingredients]; }; vkR = derive2 { name="vkR"; version="0.1"; sha256="0rb66am3y009wli8ykl58i02kzm6cdqz5v5d4vvzlbngz8crdkyy"; depends=[httr jsonlite XML]; }; vlad = derive2 { name="vlad"; version="0.2.0"; sha256="0bq91n51f9cnvbqskk0vg6xn559z3a33csbvyhvcvhyjcws2yahp"; depends=[Rcpp RcppArmadillo]; }; vmd = derive2 { name="vmd"; version="0.1.0"; sha256="17c06a9l6i90ivpvf3rgv6yrsqv36qmywmmy92y5b81zqhgmh907"; depends=[ggplot2 magrittr R6 Rcpp reshape2 scales]; }; @@ -15038,7 +15057,7 @@ in with self; { vortexR = derive2 { name="vortexR"; version="1.1.6"; sha256="113ndhf2f3hlhmgbg6gh5fq1az6d314fwl872dwypj2zsvfm7x03"; depends=[betareg data_table GGally ggplot2 glmulti gtools irr plyr R_utils stringr vortexRdata]; }; vortexRdata = derive2 { name="vortexRdata"; version="1.0.5"; sha256="0b47q3aslz4110a1bfaa103i098y2ngzrjh01rwasq3gd6xbif9n"; depends=[]; }; vosonSML = derive2 { name="vosonSML"; version="0.29.4"; sha256="0ngipwg83xw832ikaaqbyh2zxkwwwxalp6xrb60dk96z2r7qgj2r"; depends=[data_table dplyr Hmisc httpuv httr igraph magrittr purrr RCurl RedditExtractoR rlang rtweet stringr textutils tibble tictoc tm]; }; - vote = derive2 { name="vote"; version="1.1-0"; sha256="1kxbv4062g4x9vn4gh74c6zwdshysw5n7vx9qljhq2wrdnqzjpyg"; depends=[formattable knitr]; }; + vote = derive2 { name="vote"; version="1.2-1"; sha256="14bqmamndq5l7mfij8kfzk2lyrn0b52jgafgy9qb93qvk1fr5raz"; depends=[formattable knitr]; }; voteogram = derive2 { name="voteogram"; version="0.3.1"; sha256="12xv0c3g4vr23c8adkk8z7m7sx31w5mjvdg9h4qbvaimb99p2r7z"; depends=[dplyr ggplot2 jsonlite scales]; }; votesys = derive2 { name="votesys"; version="0.1.1"; sha256="1z7cx3rj3bfrkb6jkmf1m1wad5ff46zrab5vhk69wf3jbwd9h920"; depends=[data_table gtools Matrix]; }; vottrans = derive2 { name="vottrans"; version="1.0"; sha256="1fp7jrw072ws39bqsg88bm2qndcv68aa2vdqwgnza58p1dfq3x9f"; depends=[quadprog]; }; @@ -15056,7 +15075,7 @@ in with self; { vsgoftest = derive2 { name="vsgoftest"; version="0.3-2"; sha256="020kghcfv8h0i7fzq3p2grhhbwvqmc9ya9r7lc1kiqg1bfgljg91"; depends=[fitdistrplus Rcpp]; }; vstsr = derive2 { name="vstsr"; version="1.0.0"; sha256="0flsw5yw1vmj5x866klxmjqz5aimkvjiwl1zdciz63p9zffmb4gz"; depends=[httr jsonlite magrittr R6 RCurl xml2]; }; vtable = derive2 { name="vtable"; version="0.6.0"; sha256="13kj9fanrj1xk3n1fc55lv48l2hrysp9b4fmkws7l8qfai4y53gl"; depends=[rstudioapi sjlabelled]; }; - vtreat = derive2 { name="vtreat"; version="1.5.1"; sha256="0d755r84cpw5fglj8afrazhqvswa6xkp4xwa1jdcmpiaw4f0mhdx"; depends=[digest wrapr]; }; + vtreat = derive2 { name="vtreat"; version="1.6.0"; sha256="1qldqdc0k5ifzqy53fmh24cdxl4xxil9s3l8kff23fdvm3fmvk3n"; depends=[digest wrapr]; }; vtree = derive2 { name="vtree"; version="4.0.0"; sha256="0i88ab7pjbj5s5xvykx47xxhqlk1vw3anra30wvhy6cr9774x8bg"; depends=[DiagrammeR DiagrammeRsvg htmlwidgets rsvg shiny]; }; vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; }; vwline = derive2 { name="vwline"; version="0.2-2"; sha256="1hilr996xn5wh8kfyab55w2i1c02a8x909h4ahag5q6s7603qng5"; depends=[gridBezier polyclip]; }; @@ -15078,12 +15097,12 @@ in with self; { walkalytics = derive2 { name="walkalytics"; version="0.1.0"; sha256="1kl6kwwnl67d45akna01xp389wjxsxlc84l0bcpadbipsqyb3kd1"; depends=[base64enc dplyr httr purrr sp stringr tibble]; }; walker = derive2 { name="walker"; version="0.3.1-1"; sha256="135x32ar8m4m4zxdz94c7wrddsb0ps58nywh2k2gh3kqjbbzxx7a"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; }; walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; }; - wallace = derive2 { name="wallace"; version="1.0.6"; sha256="0pnkwdfmimnvyygbz1iz1b9fhcdi7k53wjw44kmnr2b7ln9pbcl2"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos rmarkdown shiny shinyjs shinythemes spocc spThin XML zip]; }; + wallace = derive2 { name="wallace"; version="1.0.6.2"; sha256="0qhy1m9imwqmb6lzgx25xqqyrlja13g4l96c6q9mn008kmljpn0n"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos rmarkdown shiny shinyjs shinythemes spocc spThin testthat XML zip]; }; wally = derive2 { name="wally"; version="1.0.10"; sha256="1d03vxn6q7v0nsrkd7dxkkv3siysgicv6c13fkvwmypln9vsl6sl"; depends=[data_table prodlim riskRegression]; }; walmartAPI = derive2 { name="walmartAPI"; version="0.1.5"; sha256="1nng8izncj2nmmpywn1ggpzvjh8q7y3q6260qhy9kbmvrrl26spf"; depends=[dplyr glue httr magrittr purrr stringr tibble]; }; walrus = derive2 { name="walrus"; version="1.0.3"; sha256="1nk2glcvy4hyksl5ipq2mz8jy4fss90hx6cq98m3w96kzjni6jjj"; depends=[ggplot2 jmvcore R6 WRS2]; }; wand = derive2 { name="wand"; version="0.5.0"; sha256="0y9xmh9a93lnadg83i223j2nf77jazz8m1ck1bmdf5jwj4vyzaqa"; depends=[]; }; - warbleR = derive2 { name="warbleR"; version="1.1.20"; sha256="0xk7n98h80larhh1mvs8d9ji17hvq699gcy22m5xaqqh8xi4y1h0"; depends=[dtw fftw maps monitoR NatureSounds pbapply pracma RCurl rjson seewave Sim_DiffProc tuneR]; }; + warbleR = derive2 { name="warbleR"; version="1.1.23"; sha256="0qvi2kfp6fvi45kh21fcrj9b0wdk67mm67v16fvgbjk9dvwi67kv"; depends=[dtw fftw maps monitoR NatureSounds pbapply pracma RCurl rjson seewave Sim_DiffProc tuneR]; }; warp = derive2 { name="warp"; version="0.1.0"; sha256="16bmym91h0sbbh4iqasqs0f4kp3jqlm3sqgc356mznhxwnsm8dm2"; depends=[]; }; warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; }; washdata = derive2 { name="washdata"; version="0.1.2"; sha256="01cnlhymh3qg9c7fda8s6lvm4j2vklmb72dfk17sn4p0kkikf9m8"; depends=[]; }; @@ -15100,26 +15119,26 @@ in with self; { waved = derive2 { name="waved"; version="1.2"; sha256="0zv4rgazk9s295pggzfa7sc062zv68dgds1ngxcz7vg1fx0qkgxg"; depends=[]; }; waveformlidar = derive2 { name="waveformlidar"; version="1.1.0"; sha256="01ynxgk0cf7w1h5j5dic4yayvnilgdx4ih0icwnldyhpik1wc2wx"; depends=[caTools data_table flux minpack_lm raster reshape2 rgdal rgeos sp splitstackshape sqldf]; }; wavefunction = derive2 { name="wavefunction"; version="1.0.0"; sha256="1g0g9i0s93lcpcx7icqn15bvkmd79slkgimspvvwp2bxdsc5nnf2"; depends=[]; }; - wavelets = derive2 { name="wavelets"; version="0.3-0.1"; sha256="13gaqhc2aqp5vcqa9gb4zilggnhszkz0zyk0whfj0s72yjvxxl27"; depends=[]; }; + wavelets = derive2 { name="wavelets"; version="0.3-0.2"; sha256="07706rsjdmzj46ib2kfm5lfk4bnm2wfw7rby0ixs6x0myyzxdl92"; depends=[]; }; wavemulcor = derive2 { name="wavemulcor"; version="2.2.1"; sha256="0150ybf8lwxc93zhcrsmh4gp6wbib3s14j95jlg6dlsckixyi3iw"; depends=[waveslim]; }; waver = derive2 { name="waver"; version="0.2.1"; sha256="1kl14cd96fwrqvk35sqbgi8bf31gc2ccxxy5d1v46scwyqkb0g5l"; depends=[geosphere rgdal rgeos sp]; }; - waveslim = derive2 { name="waveslim"; version="1.7.5.1"; sha256="0mky0nb4xxp8rybp87mxw2f1q6k400wpxv01zr4injv7ja6028xk"; depends=[]; }; + waveslim = derive2 { name="waveslim"; version="1.8.2"; sha256="0ibivnhz0l06sss5rrrcvyiwg3qpbyk3qn4vx4pp90kj09x4yg0k"; depends=[]; }; wavethresh = derive2 { name="wavethresh"; version="4.6.8"; sha256="1nz74bm7pgck1i9c28svxnic8wkwkm5dhc8bhrxiih5wxb36kcwk"; depends=[MASS]; }; wbs = derive2 { name="wbs"; version="1.4"; sha256="0ibrf30riavy6shaxgiznwh4gmnkx92260gsl0d74jkys98mlxdj"; depends=[]; }; wbstats = derive2 { name="wbstats"; version="0.2"; sha256="0rfc9c6892jq7y17dwp6vsn62ggnac964xndmxq3mip6k2pk8yi0"; depends=[httr jsonlite tidyr]; }; wbsts = derive2 { name="wbsts"; version="2.0"; sha256="12k68nsrrxglrm9ik53rm8160xvjlsgzi7v4wp78jhmh2slmyxw3"; depends=[mvtnorm Rcpp wmtsa]; }; wdm = derive2 { name="wdm"; version="0.2.1"; sha256="05yc366g2lii305ljrhh9939gf8sf517alw5xcr2sdclr00qxal4"; depends=[Rcpp]; }; - wdman = derive2 { name="wdman"; version="0.2.4"; sha256="00q9qk8qgz7fjbd9j8pxknrw8lk1ardifg8w4agyrk8r4q56b1a0"; depends=[assertthat binman semver subprocess yaml]; }; - wdpar = derive2 { name="wdpar"; version="1.0.0"; sha256="1039pf3hz5nym2y00wqwj027dc8m5ny2a1pqavbybn6cxbq0m2r1"; depends=[assertthat cli countrycode curl httr lwgeom progress rappdirs RSelenium sf sp wdman xml2]; }; + wdman = derive2 { name="wdman"; version="0.2.5"; sha256="1yf41lsrr9dbf5n4f5hv9mlmzl736fhnp9gxkm2g9apws6gsig02"; depends=[assertthat binman processx semver yaml]; }; + wdpar = derive2 { name="wdpar"; version="1.0.1"; sha256="0kqzizbs4bcph4vkv2v3wn6vcmdkpf9idl3wqadw805z2967ipv6"; depends=[assertthat cli countrycode curl httr lwgeom progress rappdirs RSelenium sf sp wdman xml2]; }; + weathercan = derive2 { name="weathercan"; version="0.3.3"; sha256="01hvrg2xx5nj7wspjhkwqs8lchya1ki16wj7flx1s1xzyd9n7x19"; depends=[dplyr httr lubridate purrr rlang rvest stringi stringr tidyr xml2]; }; weathermetrics = derive2 { name="weathermetrics"; version="1.2.2"; sha256="1hjhgsy3v8328hv4czxxz7kp68sxc10sy10f3dv5j8f6pka6qlsp"; depends=[]; }; weatherr = derive2 { name="weatherr"; version="0.1.2"; sha256="11sb5bmqccqkvlabsw4siy9n6ivsrvxavywvaffgrs3blmnygql9"; depends=[ggmap lubridate RJSONIO XML]; }; webTRISr = derive2 { name="webTRISr"; version="0.2.0"; sha256="10xj8qvibhnywsxd1yb4laz6b38qwn483a7bflizsndsgrbzdi5n"; depends=[dplyr httr jsonlite lubridate magrittr purrr readr sf stringr]; }; - webchem = derive2 { name="webchem"; version="0.4.0"; sha256="032bsfnkn7s33y42fyf8yradsh8jhms4ryjkh0r76hqnx3j00ph0"; depends=[httr jsonlite RCurl rvest stringr xml2]; }; - webddx = derive2 { name="webddx"; version="0.1.0"; sha256="0w72pp0f77glq460mjagm30y3nd9dmhjkbb0w06ycsjdqvr8qji7"; depends=[jsonlite]; }; + webchem = derive2 { name="webchem"; version="0.5.0"; sha256="06vnwvh054cj1hflip108h99ps0cb57cq4f8ydrjcxgpplbx0v4w"; depends=[dplyr httr jsonlite purrr RCurl rvest stringr xml2]; }; webdriver = derive2 { name="webdriver"; version="1.0.5"; sha256="0l3nz7gf62jlkvkn5sfxfvn0prxz3ds7nlpfb1yhnmdljhbzrgzf"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage withr]; }; webex = derive2 { name="webex"; version="0.9.1"; sha256="0z85cfnjicy3q1n77ilrh43h6xh6bpr1f1iinzfk1r64031h90yl"; depends=[jsonlite knitr rmarkdown]; }; webglobe = derive2 { name="webglobe"; version="1.0.2"; sha256="1277d6fkgrgixlhikfwf0r6z8g5b7mah905xi219qsfycxmifgn9"; depends=[geojsonio httpuv jsonlite]; }; - webmockr = derive2 { name="webmockr"; version="0.5.0"; sha256="0x4hrhmxqm4291babkkdpv25f36kvz879q3ff2j4n6hk4maqvkki"; depends=[crul curl fauxpas jsonlite magrittr R6 urltools]; }; + webmockr = derive2 { name="webmockr"; version="0.6.0"; sha256="073yq5xkim82ls385ndiwwk8pj31z07krn68v7xzafz1d0jzc18b"; depends=[crul curl fauxpas jsonlite magrittr R6 urltools]; }; webp = derive2 { name="webp"; version="1.0"; sha256="1h17g2zaq6ipsb1w6ix9m68ddmp7dspmaqflqkskylh2n8jhk8cd"; depends=[]; }; webr = derive2 { name="webr"; version="0.1.5"; sha256="03yhlla74i71nphrfhr5sd57ykj7rjanh2a8nw3cq22rg9g668jk"; depends=[dplyr flextable ggforce ggplot2 magrittr moonBook psych purrr rlang rrtable scales shiny sjlabelled stringr tibble tidyr tidyselect vcd ztable]; }; webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; }; @@ -15134,9 +15153,8 @@ in with self; { weibullness = derive2 { name="weibullness"; version="1.19.8"; sha256="19s44mxxcnhngifxshsyjr3a9zvbwywmqgby5dxd73yid1p2k9mr"; depends=[]; }; weibulltools = derive2 { name="weibulltools"; version="1.0.1"; sha256="06blip2dqaz2f3wnghp8yj0qj23s242k3r7bfcka1n52msc58xjz"; depends=[dplyr LearnBayes magrittr plotly Rcpp RcppArmadillo sandwich segmented SPREDA survival]; }; weightQuant = derive2 { name="weightQuant"; version="1.0"; sha256="1ngz51wr5qpnb98lfbddwvipcra86dq5whm6z8c4xd921anb15bx"; depends=[doParallel foreach quantreg]; }; - weightTAPSPACK = derive2 { name="weightTAPSPACK"; version="0.1"; sha256="0kpfw477qka5qrc6sh73had38xbrwrqp1yv0dj2qiihkiyrp67ks"; depends=[HotDeckImputation mice plyr survey]; }; weightr = derive2 { name="weightr"; version="2.0.2"; sha256="1qsyak91kdgv48wf6qhpfbiirlg4ba9w6rw8ynjcsnqqdvmly1lb"; depends=[ggplot2 scales]; }; - weights = derive2 { name="weights"; version="1.0"; sha256="0186bfpkhxngrshac6bpg37alp6slwhwd43inrm8hqg0vhpfgc4c"; depends=[gdata Hmisc mice]; }; + weights = derive2 { name="weights"; version="1.0.1"; sha256="1ka2kvzg464vn80qziqy4mrciy9wwd3jfasgq0d33wbiblhmxkj5"; depends=[gdata Hmisc mice]; }; weirs = derive2 { name="weirs"; version="0.25"; sha256="17a0ppi7ghikrwn39zvhg2cvhmnr3w0qi7r9lj22x65ii9nzadd7"; depends=[]; }; welchADF = derive2 { name="welchADF"; version="0.3.2"; sha256="02a8w1dhc2nd74hml4z3cdlx0d2a9rcx47v341kgav620i8bn88g"; depends=[lme4]; }; wellknown = derive2 { name="wellknown"; version="0.6.0"; sha256="156kffa421d6k9wnab4pr22h4c9gnkw3i2fbk5jg03jl2rff090w"; depends=[jsonlite V8]; }; @@ -15160,7 +15178,7 @@ in with self; { widals = derive2 { name="widals"; version="0.6.1"; sha256="1094yaaq2xb0ykvc1j3hs87j1p4h7zgf8mkn4han8iw5fmr9zncy"; depends=[snowfall]; }; widgetframe = derive2 { name="widgetframe"; version="0.3.1"; sha256="0j0d73m72nzfc1wyrgsqr99ldx72adis6pd57mpim55hz0n9l224"; depends=[htmltools htmlwidgets magrittr purrr]; }; widyr = derive2 { name="widyr"; version="0.1.2"; sha256="0mqj9w5sy8m2vqhjxmjrf68bfixbvmkigrsdzfnwvxp18hhfw5mj"; depends=[broom dplyr Matrix purrr reshape2 tidyr tidytext]; }; - wiesbaden = derive2 { name="wiesbaden"; version="1.2.1"; sha256="0ilqqv4xp4ngjq3snhzwdc8qzp3zr31kq2r4lqiv2arj5ggb1350"; depends=[httr jsonlite keyring readr stringi stringr xml2]; }; + wiesbaden = derive2 { name="wiesbaden"; version="1.2.2"; sha256="0zxz2cnxgx0p66ls1x2pz5i9iiv67ajm30a2n8m1alljnza6qigf"; depends=[httr jsonlite keyring readr stringi stringr xml2]; }; wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; }; wikifacts = derive2 { name="wikifacts"; version="0.1.0"; sha256="01mwzqign59lh7wvf8q8kwkgnfxi9nkk6n0qwfh27q64fajw8clg"; depends=[magrittr rvest xml2]; }; wikilake = derive2 { name="wikilake"; version="0.4"; sha256="0pm0brzkf2k6aknwl4b3fba5ly7mhah8qfb0h94fckiaqbnpyx9v"; depends=[maps rvest selectr sp stringi stringr units WikipediR xml2]; }; @@ -15172,7 +15190,7 @@ in with self; { wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; }; wilson = derive2 { name="wilson"; version="2.3.1"; sha256="040hq68l2ja37gx8g6q1nrr9b15v4gmc2l23c772vr4gq9k97977"; depends=[circlize colourpicker ComplexHeatmap data_table DESeq2 DT factoextra FactoMineR ggplot2 ggrepel gplots heatmaply log4r magrittr openssl plotly plyr R6 RColorBrewer reshape rintrojs rje rjson RJSONIO scales shiny shinycssloaders shinydashboard shinyjs viridis zip]; }; winRatioAnalysis = derive2 { name="winRatioAnalysis"; version="0.1.0"; sha256="1msvc06bfzw9clinxbvr5fdw38dff0c0xii46182nwnk5kj0libr"; depends=[data_table JM Matrix MLEcens mvtnorm nlme plyr pssm survival]; }; - windAC = derive2 { name="windAC"; version="1.2.0"; sha256="1dwnj0spxq9n73vg938j5jn0vvzvlqnfb4j0slzxp6lvkkyd2sc4"; depends=[mvtnorm sf]; }; + windAC = derive2 { name="windAC"; version="1.2.1"; sha256="0irm0bh9j0x72nq37lwycv6f30bb5xqm736rj6z0g6bnfd16rrmk"; depends=[mvtnorm sf]; }; windex = derive2 { name="windex"; version="1.0"; sha256="0ci10x6mm5i03j05fyadxa0ic0ngpyp5nsn05p9m7v1is5jhxci0"; depends=[ape geiger scatterplot3d]; }; windfarmGA = derive2 { name="windfarmGA"; version="2.2.3"; sha256="13jdh0c8lkc3043mnqx23s06xxkf6dvk7w9kfvwhib58rlgy0p2n"; depends=[calibrate doParallel foreach ggplot2 gstat leaflet magrittr raster RColorBrewer Rcpp rgdal rworldmap sf sp spatstat]; }; wingui = derive2 { name="wingui"; version="0.2"; sha256="0yf6k33qpcjzyb7ckwsxpdw3pcsja2wsf08vaca7qw27yxrbmaa3"; depends=[Rcpp]; }; @@ -15180,6 +15198,7 @@ in with self; { wiqid = derive2 { name="wiqid"; version="0.2.3"; sha256="166d9cdrj8vz2m5n1yxhckhs9nmd3sv13c3jcifzjixl45f8f2aa"; depends=[coda HDInterval MASS truncnorm]; }; wiseR = derive2 { name="wiseR"; version="1.0.1"; sha256="187ylwhk06957x9zm5r0m6w9wg08im83myz3s4gr927ig8yv3b5f"; depends=[arules bnlearn DescTools dplyr DT graph HydeNet igraph linkcomm missRanger psych RBGL Rgraphviz rhandsontable rintrojs shiny shinyalert shinyBS shinycssloaders shinydashboard shinyWidgets visNetwork]; }; withr = derive2 { name="withr"; version="2.1.2"; sha256="11j6zykklxnvp4xqsr6a2xib665i38m3khdspp887nwagmvnydj1"; depends=[]; }; + wkNNMI = derive2 { name="wkNNMI"; version="1.0.0"; sha256="0qpl1b2134kz9mjl38w93lp3g6kpv9ygv9hygpssm845k02hkw7c"; depends=[foreach infotheo]; }; wkb = derive2 { name="wkb"; version="0.4-0"; sha256="0mah538345npkb06bcj18mb6qnnx8nn7bdqmvqqpbawallh546a9"; depends=[sp]; }; wktmo = derive2 { name="wktmo"; version="1.0.5"; sha256="05pjyk0xsdazbi1x7xfmg097ybybd60zmzzm7sch1ikp05hzn0wb"; depends=[]; }; wmlf = derive2 { name="wmlf"; version="0.1.2"; sha256="0zxw84l5v12r15hpyd1kbajjz3cbkn5g884kmj72y7yi0yi1b6d6"; depends=[waveslim]; }; @@ -15200,9 +15219,9 @@ in with self; { wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; }; wordnet = derive2 { name="wordnet"; version="0.1-14"; sha256="12a21zlc7h973gi1632gngbk8b09vhp3sldh1mh9b5n6h18ga25p"; depends=[rJava]; }; wordspace = derive2 { name="wordspace"; version="0.2-6"; sha256="11y57mzd12klwd2xzr38nvlrxg9jsi33mxd8nnvc96hgrjsgwakl"; depends=[cluster iotools MASS Matrix Rcpp sparsesvd]; }; - workflowr = derive2 { name="workflowr"; version="1.6.0"; sha256="0q1rmaqf6v7zv8jfj7mzmdl4s87841lb3x0q34al9sgz8shwp36p"; depends=[callr fs getPass git2r glue httpuv httr knitr rmarkdown rprojroot rstudioapi stringr whisker yaml]; }; - workflows = derive2 { name="workflows"; version="0.1.0"; sha256="1vmjlfyjavvz0677832cvn296xwk5rkv0jr4cncganadh2yjqa1d"; depends=[cli ellipsis generics glue hardhat parsnip rlang]; }; - worldmet = derive2 { name="worldmet"; version="0.8.7"; sha256="1hhh3a28xxi5265053gclsbihv41372f64isz9xc5sjdjnpcv6g4"; depends=[doParallel dplyr foreach leaflet openair readr zoo]; }; + workflowr = derive2 { name="workflowr"; version="1.6.1"; sha256="15am5qcscwfcg2b80ky3c72mkqmlibp49b76468q4x8pmkr3prwi"; depends=[callr fs getPass git2r glue httpuv httr knitr rmarkdown rprojroot rstudioapi stringr whisker yaml]; }; + workflows = derive2 { name="workflows"; version="0.1.1"; sha256="14lzbszz7ybfzqa5zw1hfh81b8rbwwyza6x8nhpnknl6x4adqfql"; depends=[cli ellipsis generics glue hardhat parsnip rlang]; }; + worldmet = derive2 { name="worldmet"; version="0.8.8"; sha256="0zanjlb2h10v4hss8w0p234k5yy3rnd1plzr9smiwn06fbmvy5zy"; depends=[doParallel dplyr foreach leaflet openair readr zoo]; }; worms = derive2 { name="worms"; version="0.2.2"; sha256="183chjdi5qvsmdznvc9igcxaz769a37rwh5nzgvf5zf012a85wir"; depends=[httr plyr]; }; worrms = derive2 { name="worrms"; version="0.4.0"; sha256="0nb02k0aimf6z1fw4y5qzja4xwgwff7gdzh364w2lrhj8imcb044"; depends=[crul data_table jsonlite tibble]; }; wosr = derive2 { name="wosr"; version="0.3.0"; sha256="0fl9mizrjg3r7n7gslsxgaw3k2v63scqmvnv6341q8sq7018hzln"; depends=[httr jsonlite pbapply xml2]; }; @@ -15210,8 +15229,8 @@ in with self; { wpp2010 = derive2 { name="wpp2010"; version="1.2-0"; sha256="1h87r1cn4lnx80dprvawsyzfkriscqjgr27gvv7n19wvsx8qd57k"; depends=[]; }; wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; }; wpp2015 = derive2 { name="wpp2015"; version="1.1-2"; sha256="07bnbmrshlqnlpca5djpq5crnpsmz228wmbpv1ah7ywnjvks6fyx"; depends=[plyr]; }; - wpp2017 = derive2 { name="wpp2017"; version="1.2-1"; sha256="1hg3fj92ja93kw226crfxjvnjb7p0svdbi6pr3sqkg9w5zpwfwp1"; depends=[]; }; - wpp2019 = derive2 { name="wpp2019"; version="1.1-0"; sha256="0gx8rgz9lg6crn6ss76sg4xj8dsiwj08fkq5f67slvx4c0cjfhc5"; depends=[]; }; + wpp2017 = derive2 { name="wpp2017"; version="1.2-3"; sha256="1w7cg31larvgaah16ch6z11jjq02i5f20hfwg63wvw5p6fyafivz"; depends=[data_table]; }; + wpp2019 = derive2 { name="wpp2019"; version="1.1-1"; sha256="03c0ybk1m8lr6dxckm1950h617yhphgxsg01qj5ywbcm7rpvw1a0"; depends=[data_table]; }; wppExplorer = derive2 { name="wppExplorer"; version="2.3-3"; sha256="0sz31xsdlk9p52sl5dik7g0qmkrjb7ydkknd154c988kqb5gbp0w"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2019]; }; wql = derive2 { name="wql"; version="0.4.9"; sha256="0m16l807mhcjkbqhlzhc24pw4hl78fjyykiszlg337x3qs803fg2"; depends=[ggplot2 reshape2 zoo]; }; wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; }; @@ -15219,13 +15238,13 @@ in with self; { wrProteo = derive2 { name="wrProteo"; version="1.0.0"; sha256="110rpwac6hccv8i55fdw3mzd500jip1ldzmqw4196igq61cd9m20"; depends=[limma wrMisc]; }; wrangle = derive2 { name="wrangle"; version="0.5.2"; sha256="1b6qgwdjvwbrarp9ylgkb5ia1p5a5g7ws0jyqrwc6hii8z5yj2qb"; depends=[dplyr lazyeval magrittr rlang tidyr]; }; wrapr = derive2 { name="wrapr"; version="1.9.6"; sha256="0kpwjasnsskk6l2najydcxqwa0ms2mf7v0y286hv8gipqfq48z03"; depends=[]; }; - wrassp = derive2 { name="wrassp"; version="0.1.8"; sha256="052x0lxpchr6f97yfj3vmhh8gc8qg5pp1m91h5akrav4yfawbs7k"; depends=[]; }; + wrassp = derive2 { name="wrassp"; version="0.1.9"; sha256="09z8s0g6l9z4rwnf36w4bd734agd471swz3f24178b4j6m05kqhm"; depends=[tibble]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; writexl = derive2 { name="writexl"; version="1.2"; sha256="09fhdip6igcg97fjx4c7727cx2lb49l4d74l4i8rg2bag2s5lrj3"; depends=[]; }; wrswoR = derive2 { name="wrswoR"; version="1.1"; sha256="0jnb818xz841bx2i03k3hhy4hxcwpxblskg9nrc8kgbc22rxx4lz"; depends=[logging Rcpp]; }; wrswoR_benchmark = derive2 { name="wrswoR.benchmark"; version="0.2"; sha256="0vzs2lqq48kzk63xz2k9b7qcy0ph5yyvih6z98jfz36kpdfhdps9"; depends=[curl lazyeval]; }; wru = derive2 { name="wru"; version="0.1-9"; sha256="0xrm3f1khggcvdzzk65mnbfcyji3kjz8hrk9d2n4y15nhpbw8p8h"; depends=[devtools]; }; - wskm = derive2 { name="wskm"; version="1.4.28"; sha256="0d9hcriakg6fxzc8wjsahc4zkyjza31mb9dv2h4xcf8298xa96i4"; depends=[clv lattice latticeExtra]; }; + wskm = derive2 { name="wskm"; version="1.4.36"; sha256="1vg16plz67abmnbzxfb7cyc0zyvi6in54ry5gg0bmbxaq1rcipmw"; depends=[fpc lattice latticeExtra]; }; wsrf = derive2 { name="wsrf"; version="1.7.17"; sha256="0gmlvfcy2iqa5sqhwps3hx0hl9fir8nf5xq62f25sn8i3llw752z"; depends=[Rcpp]; }; wsyn = derive2 { name="wsyn"; version="1.0.2"; sha256="0jl0wnw11yrbiygcpcnl1yi8xf5dd3sbh0c2yic8dc0p64k6iass"; depends=[fields MASS]; }; wtest = derive2 { name="wtest"; version="3.2"; sha256="063ax9mbb2dy33l1cl533mjzpvhf2akw3613pklfjg6bhprlniz7"; depends=[]; }; @@ -15233,10 +15252,10 @@ in with self; { wv = derive2 { name="wv"; version="0.1.1"; sha256="06xf3c97pjhln1v31waj8rmp4r0y2kp6v2x10pbpvi8m0nf5zfs1"; depends=[coda Rcpp RcppArmadillo simts]; }; wvtool = derive2 { name="wvtool"; version="1.0"; sha256="0x9awj6g5lzqp2lhwgh9ib7jmfdzyhwazrjvw1vwacqqfhbz8qxv"; depends=[]; }; wwntests = derive2 { name="wwntests"; version="1.0.0"; sha256="1wsqbhsnzkishqwxz5kjcb5xawafizi3ip4yzxj05p9rx9wja1yc"; depends=[ftsa MASS rainbow sde]; }; - wyz_code_metaTesting = derive2 { name="wyz.code.metaTesting"; version="1.1.4"; sha256="0npk9axsg6x8pgf3f19y2544jlrzf88269604cfdynp724l2dwb9"; depends=[crayon data_table lubridate tidyr wyz_code_offensiveProgramming]; }; - wyz_code_offensiveProgramming = derive2 { name="wyz.code.offensiveProgramming"; version="1.1.16"; sha256="1hsm6mb6cz58f0xgl8330gd40kbqplg3d4r133ncg0r43qb528xj"; depends=[crayon data_table lubridate R6 stringr tidyr]; }; - wyz_code_rdoc = derive2 { name="wyz.code.rdoc"; version="1.1.7"; sha256="0rravk8hl2pbr3blsx96xas2zi7c9d83mpzhrqqqna66hg88zq5q"; depends=[data_table lubridate R6 tidyr wyz_code_offensiveProgramming]; }; - wyz_code_testthat = derive2 { name="wyz.code.testthat"; version="1.1.9"; sha256="0i4jmww0sg5w8ffvk4302jdi3m5bfrbywbx5756r4dijfhv9n2kq"; depends=[data_table lubridate R6 tidyr wyz_code_offensiveProgramming]; }; + wyz_code_metaTesting = derive2 { name="wyz.code.metaTesting"; version="1.1.11"; sha256="1misp5yc015himyd0qniwz1b7fh6x74pw7si5c4gh18brwszycpw"; depends=[crayon data_table lubridate tidyr wyz_code_offensiveProgramming]; }; + wyz_code_offensiveProgramming = derive2 { name="wyz.code.offensiveProgramming"; version="1.1.17"; sha256="00s8dzk86r3iaxvihzpgi550ljqy38sdlma7gvvb2mma6xa114i5"; depends=[crayon data_table lubridate R6 stringr tidyr]; }; + wyz_code_rdoc = derive2 { name="wyz.code.rdoc"; version="1.1.15"; sha256="08f3c9wnlwwv6lhzhl9aljwnqmz0hrf7j2hrd90wa6m31aaks7dj"; depends=[crayon data_table digest lubridate R6 stringr tidyr wyz_code_offensiveProgramming]; }; + wyz_code_testthat = derive2 { name="wyz.code.testthat"; version="1.1.16"; sha256="06xbhk5b0r8y98xl0lab5cndlhv3a9dvbhrnld39mhq1wwryx2sh"; depends=[data_table lubridate R6 tidyr wyz_code_offensiveProgramming]; }; x_ent = derive2 { name="x.ent"; version="1.1.7"; sha256="15qra77dqhj27g3qx92gram4mq4n9fdidygdpvxfmcx7ww3vc6yh"; depends=[ggplot2 jsonlite statmod stringr xtable]; }; x12 = derive2 { name="x12"; version="1.9.0"; sha256="0hrcw1d52yp5rr4r120lcnfxw2rgs95njg37m28blcnfbq2flfc2"; depends=[stringr x13binary]; }; x12GUI = derive2 { name="x12GUI"; version="0.13.0"; sha256="1mga7g9gwb3nv2qs27lz4n9rp6j3svads28hql88sxaif6is3nk1"; depends=[cairoDevice Hmisc lattice RGtk2 stringr x12]; }; @@ -15247,11 +15266,9 @@ in with self; { xRing = derive2 { name="xRing"; version="0.1.0"; sha256="17f1jif8yw2508k86p8mjgw1h20ml5wzaff04ix9xq96plqzi8ma"; depends=[dplR imager tcltk2 tkRplotR]; }; xSub = derive2 { name="xSub"; version="2.0.2"; sha256="00mahp8fi6iskjaf5nwka67a7hqb3i08j8yrd4d2av39zfs268h2"; depends=[countrycode haven RCurl]; }; xVA = derive2 { name="xVA"; version="0.8.1"; sha256="0wr4i37sya5gg6v63ka16g9077gxbhvjqyqfaahhban8skzl2adf"; depends=[SACCR Trading]; }; - xaringan = derive2 { name="xaringan"; version="0.14"; sha256="16c20bkhizw65nnp2lyc6kjd461abj794qh4d00y8fglyj6wjjky"; depends=[htmltools knitr rmarkdown servr xfun]; }; + xaringan = derive2 { name="xaringan"; version="0.15"; sha256="1lkkbma5cdaa7i18km81hbwz17j5zxp8ysia458zj5nlvyr6xp6s"; depends=[htmltools knitr rmarkdown servr xfun]; }; xbreed = derive2 { name="xbreed"; version="1.0.1.1"; sha256="032i04ginyf9dyabfkygnhrkq7lqdvvyw7s41vjimy2kvjrnkkkx"; depends=[BGLR]; }; xdcclarge = derive2 { name="xdcclarge"; version="0.1.0"; sha256="1j8wsidwmfjygqlwavxinv4bqc6rddy42jdmlknsjfrrs49yj8kn"; depends=[nlshrink Rcpp RcppArmadillo]; }; - xergm = derive2 { name="xergm"; version="1.8.3"; sha256="155469550rsdwszrhw7vdgwz2h0d72a8f4hirrb6hny7f1q63ykk"; depends=[btergm GERGM rem tnam xergm_common]; }; - xergm_common = derive2 { name="xergm.common"; version="1.7.7"; sha256="0nfls8a1knmnjjrrw0q93qsfrrb9p3yqsm5dxp13z0780vrzxvcj"; depends=[ergm network]; }; xesreadR = derive2 { name="xesreadR"; version="0.2.3"; sha256="1pvdx0mxg2f885bhy4hb3kqzcgva4q7hzzaipkfzyi5lnjdsbc81"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; }; xfun = derive2 { name="xfun"; version="0.12"; sha256="0sgh8kafi9x1glmmcp1ly827pm8q7fsfngbplr41fbb4nc9363df"; depends=[]; }; xgb2sql = derive2 { name="xgb2sql"; version="0.1.2"; sha256="1gw5dw0ck5hip8mv347zaswrggk395bg2hgn02bvqs0d31jhmgvi"; depends=[data_table xgboost]; }; @@ -15262,26 +15279,29 @@ in with self; { xkcd = derive2 { name="xkcd"; version="0.0.6"; sha256="1z2y0ihn68ppay7xkglhw7djki5654g6z4bbpyy41if57z9q554f"; depends=[extrafont ggplot2 Hmisc]; }; xkcdcolors = derive2 { name="xkcdcolors"; version="1.0"; sha256="07fnjv01r3b951dqca2zs9b9f6hsgbpbpsrggvb8rps53kpid0i7"; depends=[FNN]; }; xlink = derive2 { name="xlink"; version="1.0.1"; sha256="02ahgjampy92gcwhv269px5w8651a7j50dn1295zwqxj44lk4g9q"; depends=[survival]; }; - xlsx = derive2 { name="xlsx"; version="0.6.1"; sha256="1d58qlzdj4vrk4vnlyzri600ix7z3wnc30gnbcc1qz27nlbbv055"; depends=[rJava xlsxjars]; }; + xlsx = derive2 { name="xlsx"; version="0.6.3"; sha256="0ph3bqngczm2h46s159s6cpxjkcrsi1di8a325x2wl5ls7mbiag5"; depends=[rJava xlsxjars]; }; xlsx2dfs = derive2 { name="xlsx2dfs"; version="0.1.0"; sha256="0bdawr80grks91sy221d33fsk75g20zh3wjg6gvd0zj0m1zvvwvd"; depends=[openxlsx]; }; xlsxjars = derive2 { name="xlsxjars"; version="0.6.1"; sha256="1rka5smm7yqnhhlblpihhciydfap4i6kjaa4a7isdg7qjmzm3h9p"; depends=[rJava]; }; xltabr = derive2 { name="xltabr"; version="0.1.2"; sha256="0pwbpcdiqkhvzxsi6yxly4zza12bw7zc7ji8cvhldw4yl5sxkz1l"; depends=[magrittr openxlsx]; }; xlutils3 = derive2 { name="xlutils3"; version="0.1.0"; sha256="1cxishi62bd36zlsy5qhzix1p68akdf9kpjg9gfm9aqpcijzccb9"; depends=[magrittr readxl]; }; xmeta = derive2 { name="xmeta"; version="1.1-5"; sha256="1r2mqrrcl7vmbyydw3kzpskinkiqr919bxgq69i1y6pbfim7jzag"; depends=[aod glmmML metafor mvmeta numDeriv]; }; - xml2 = derive2 { name="xml2"; version="1.2.2"; sha256="1x3q3a0xv8j0nx3hs4d3pfjm5g9nvaxmfrapba9f4nrkqi3z2l1h"; depends=[Rcpp]; }; + xml2 = derive2 { name="xml2"; version="1.2.5"; sha256="0mp61gg8s3zfq10g10vjk0mrcx6d5gm81n4ji8an2my11g61yq94"; depends=[Rcpp]; }; xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.3"; sha256="0gjr3l5z5dp276lchr2649as1rkj56d2mlvbr66yg393zzw50lsh"; depends=[]; }; xmlrpc2 = derive2 { name="xmlrpc2"; version="1.1"; sha256="13rfw0civp3hzi4hn31x1idliid1qb73495x4c31z5msd35lzxrs"; depends=[base64enc curl xml2]; }; xmrr = derive2 { name="xmrr"; version="1.0.36"; sha256="0xxi8z9sp156508y5a7f4ax8yry7lg4qmn0hyk04dn1xr7syd4gs"; depends=[dplyr ggplot2 tidyr]; }; - xnet = derive2 { name="xnet"; version="0.1.10"; sha256="1jjnj35j8wwnlc1w31m3l95kmgxm58rfbfkidrjhq6l96npprgn4"; depends=[]; }; - xoi = derive2 { name="xoi"; version="0.68-3"; sha256="0swi9zilghkfm17b39sdn7im4pcxcw7fk77jqxwib29q7x6574bk"; depends=[qtl]; }; + xnet = derive2 { name="xnet"; version="0.1.11"; sha256="18lda1gv53awsbkk5p4bzrbilndgybdz8xc6lhl6wy647fw9q9hv"; depends=[]; }; + xoi = derive2 { name="xoi"; version="0.69-2"; sha256="1582flnh76fmqx5v1rzf021hlrcg53f2fdax1a8ad1nrcjpbj18r"; depends=[qtl]; }; xopen = derive2 { name="xopen"; version="1.0.0"; sha256="1vrvgdika1d63dwygynbv2wmd87ll8dji5dy89hj576n8hw601z2"; depends=[processx]; }; + xpectr = derive2 { name="xpectr"; version="0.2.0"; sha256="178ifvi7qlr3bpkjgz46zsfb2irfnlqc8xpa13ai78ni62bm27ki"; depends=[checkmate dplyr lifecycle plyr rlang rstudioapi testthat tibble]; }; xplain = derive2 { name="xplain"; version="0.2.1"; sha256="01hl9dxiqqxzdixqccga0sywlhv97pi1l51r9sr7v106s7q11jxn"; depends=[RCurl readr XML]; }; xplorerr = derive2 { name="xplorerr"; version="0.1.1"; sha256="17h8z9rmqkmm6lm9gipa33mr7zxpzd5xbjk251592mwr79lwsh8n"; depends=[magrittr shiny]; }; - xpose = derive2 { name="xpose"; version="0.4.6"; sha256="0y3fcy2g8qnb5nzfwimrx87c2h3k26im9h64fmv834zba7chkc47"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; - xpose4 = derive2 { name="xpose4"; version="4.6.1"; sha256="1722ai8r94dmy4d2r728iir0hl2b2gmym8xjsqscfc6jw070734i"; depends=[dplyr gam Hmisc lattice lazyeval readr survival]; }; + xpose = derive2 { name="xpose"; version="0.4.8"; sha256="0dc9ywkkb98fyp4j1gak4jrnmgcvx9hpf5ixspxaqb4aqqgqnjcs"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; + xpose_nlmixr = derive2 { name="xpose.nlmixr"; version="0.1.5"; sha256="05fb453ayzrscha0153gx8axdqgml3zq5cacp440f9a66nv2dwfi"; depends=[crayon dplyr ggplot2 magrittr nlme nlmixr stringr tibble tidyr vpc xpose]; }; + xpose4 = derive2 { name="xpose4"; version="4.7.0"; sha256="0lpbk85d17spg6vwf7acqaz7fv2l0rv6qkczbgm4fw28qiaykci6"; depends=[dplyr gam Hmisc lattice lazyeval readr survival]; }; xptr = derive2 { name="xptr"; version="1.1.2"; sha256="19zmzawp4mprwbcq2ajwwmmnf8vgnrkn86m246gz5f7rxzqz0vk3"; depends=[]; }; xray = derive2 { name="xray"; version="0.2"; sha256="1ibj92ljlj8a5rmbrci691yhpd4kwrfyl944nzl2dcbf58l01dzq"; depends=[dplyr foreach ggplot2 lubridate scales]; }; xrf = derive2 { name="xrf"; version="0.1.2"; sha256="0mcyjw75f2w3hvx1r6lhc4yidmih2z6dfmkxvywm499whk2pcqhv"; depends=[dplyr fuzzyjoin glmnet Matrix rlang xgboost]; }; + xrnet = derive2 { name="xrnet"; version="0.1.7"; sha256="136aadrvsdg9hizjg4q12h56ih0s3w88j3jpfb54ajgdmqw3pldi"; depends=[BH bigmemory foreach Rcpp RcppEigen]; }; xseq = derive2 { name="xseq"; version="0.2.1"; sha256="0bsakbfvkfv39q2ch2g21b17g84470sq4v73355cljlshsi6404i"; depends=[e1071 gptk impute preprocessCore RColorBrewer sfsmisc]; }; xslt = derive2 { name="xslt"; version="1.3"; sha256="0giqzmdby9ax8gwx9b7xqka28k3hgymv4289k8p8dvg26d683p3l"; depends=[Rcpp xml2]; }; xsp = derive2 { name="xsp"; version="0.1.2"; sha256="1jbmxa234v52qji8sz4bkg24c2n65b0zh9py1wyyfzw9n1wx5w0r"; depends=[ggplot2 reshape2]; }; @@ -15292,48 +15312,47 @@ in with self; { xtermStyle = derive2 { name="xtermStyle"; version="3.0.5"; sha256="1q4qq8w4sgxbbb1x0i4k5xndvwisvjszg830wspwb37wigxz8xvz"; depends=[]; }; xts = derive2 { name="xts"; version="0.12-0"; sha256="0q4cc8ynp7ndmgll1jj3lxyl6wmgg89ad3wq09kjc2ngszdfc4fz"; depends=[zoo]; }; xtune = derive2 { name="xtune"; version="0.1.0"; sha256="0bpf1cx7v7q0a1jip04xd0bjg9ilagrf7wg7a9y0m6wgw7s2b9jn"; depends=[glmnet selectiveInference]; }; - xwf = derive2 { name="xwf"; version="0.2-2"; sha256="1psryam65pg7flfa20smm6lx184f76dhjv1lig8sy7y9hphfv3s1"; depends=[mgcv]; }; + xwf = derive2 { name="xwf"; version="0.2-3"; sha256="1byj6vjk2abm9j919107xsa3nd40zbsvxaldvv4ml3c47k1fg3kc"; depends=[mgcv]; }; xxIRT = derive2 { name="xxIRT"; version="2.1.2"; sha256="0b8yv8ixmcjiv9hlvpfdknx815smy7df7f2ixifnvhxxafgf1fwq"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2]; }; xyloplot = derive2 { name="xyloplot"; version="1.6"; sha256="0d1dv3syfjwcp9fil9bl1my19d0kdyz1qrp1yf7ykrk8aq91762v"; depends=[]; }; xyz = derive2 { name="xyz"; version="0.2"; sha256="13w4sb4pvgciwr8wsz785dafj2k2kpx7znz46r5d32wx88vkycp4"; depends=[Rcpp]; }; - yaImpute = derive2 { name="yaImpute"; version="1.0-31"; sha256="0088i9rlpkxb42xp11cr0h2ql9k581qvnz4ppldrnqci8c1qdpff"; depends=[]; }; + yaImpute = derive2 { name="yaImpute"; version="1.0-32"; sha256="1zvkrmlj48ahg9jq0fkbn7j603fmmld57yc0gjfas2mqa7cfbvh8"; depends=[]; }; yacca = derive2 { name="yacca"; version="1.1.1"; sha256="1hxgkyxipk27p74vdkiy8a3wjymhcsc6ad3y9mf15qsl2xim6wwl"; depends=[]; }; yager = derive2 { name="yager"; version="0.1.0"; sha256="01gxpaf4wvii056xn84m9gkq46m7hxqgg5f2frakhgnlpm3afgfb"; depends=[lhs MLmetrics randtoolbox]; }; yakmoR = derive2 { name="yakmoR"; version="0.1.1"; sha256="09aklz79s0911p2wnpd7gc6vrbr9lmiskhkahsc63pdigggmq9f7"; depends=[BBmisc checkmate Rcpp]; }; - yaml = derive2 { name="yaml"; version="2.2.0"; sha256="0in562nd0i23cg91a8kdbqgim656fgscykwi0icsnq53xj3srg2m"; depends=[]; }; - yamlet = derive2 { name="yamlet"; version="0.3.3"; sha256="181kz8xnkgm7k9ff6iw7jydfl69717b19bwwwxpyy8p9pxzmr94q"; depends=[csv dplyr encode ggplot2 knitr rlang yaml]; }; + yaml = derive2 { name="yaml"; version="2.2.1"; sha256="10r7g26x73am45niigm3k466030nymnr3v3fjljafzrr5aybf58i"; depends=[]; }; + yamlet = derive2 { name="yamlet"; version="0.4.6"; sha256="1113iid1iiz7rnsz7v5r95rdwnq9zdiwa8q4805vb3sjjk531kqq"; depends=[csv dplyr encode ggplot2 rlang spork units xtable yaml]; }; yap = derive2 { name="yap"; version="0.1.0"; sha256="12cagxisky7aq04ab9ycd4mp7xfs7z0v3rc2sczcngn2pc8pdjm7"; depends=[lhs randtoolbox]; }; - yardstick = derive2 { name="yardstick"; version="0.0.5"; sha256="0gmfq1jx8lp6b24clxyj5r1976q3znlchbqa6jk87lyd5fn43f7b"; depends=[dplyr generics pROC Rcpp rlang tidyselect]; }; + yardstick = derive2 { name="yardstick"; version="0.0.6"; sha256="1qkvbvc0cnwl5mkk47swnd8by84zz0qpy1996fziapn35qxvx9qa"; depends=[dplyr generics pROC Rcpp rlang tidyselect]; }; yarr = derive2 { name="yarr"; version="0.1.2"; sha256="16q109jrydckz7s1rkmr2sh8q92cgr1c534fvpbh3h0bc3fvvf8g"; depends=[]; }; yarrr = derive2 { name="yarrr"; version="0.1.5"; sha256="1258bj7x4icaxfabnnd3fgwydnqbzxkih7zw0sdlwdax3q8fw5c5"; depends=[BayesFactor circlize jpeg]; }; yasp = derive2 { name="yasp"; version="0.2.0"; sha256="0fza8h9y1wmarsmjcvw4r970d6j4ii795pd2h4xh9nlsirv50adi"; depends=[]; }; - yatah = derive2 { name="yatah"; version="0.0.1"; sha256="1w76a34k3jyiv1ql2bkyh1d77p1lqsyvy2p0ip3sdrsi043a5s4y"; depends=[ape purrr stringr]; }; + yatah = derive2 { name="yatah"; version="0.1.0"; sha256="0ayy0h399g3csn106vvq6j4h6w0sgzw33b7gj1hk05nc8hdzrmna"; depends=[ape purrr stringr]; }; ycinterextra = derive2 { name="ycinterextra"; version="0.1"; sha256="0hr37izbbmxqkjy6a7q8vcn0vs8an1ck9y8xfjpl5z0rygi8xc1v"; depends=[mcGlobaloptim]; }; - yesno = derive2 { name="yesno"; version="0.1.0"; sha256="0l3v51kghbq9s00s736s4jvl8a0yhbgb908mjvhw6k5nqb2cgh8a"; depends=[]; }; + yesno = derive2 { name="yesno"; version="0.1.1"; sha256="10saf2s3argpxgny2av5mm021nx09302rvr29887a7mvm5662kl2"; depends=[]; }; yhat = derive2 { name="yhat"; version="2.0-0"; sha256="0vdhkknmms7zy7iha894jn1hr1h5w67pr53r0q67m7p404w21iza"; depends=[boot miscTools plotrix yacca]; }; yhatr = derive2 { name="yhatr"; version="0.15.1"; sha256="18g2cr1kjxnfw6cwzl62ynppfv1zz732kbx18zq8918l85kx6wbw"; depends=[httr jsonlite stringr]; }; ykmeans = derive2 { name="ykmeans"; version="1.0"; sha256="0xfji2fmslvc059kk3rwkv575ffzl787sa9d4vw5hxnsmkn8lq50"; depends=[foreach plyr]; }; yll = derive2 { name="yll"; version="1.0.0"; sha256="0lf3cd6pfzki29nk2iy0vd6v4dw6zlsbrjh2839zq5vlpiimsvck"; depends=[]; }; - ymlthis = derive2 { name="ymlthis"; version="0.1.1"; sha256="04vf722n0yk50bclv25m11rfvqjja5kjzkn9bbdf8pw3kw83brqa"; depends=[crayon fs glue magrittr miniUI purrr rlang rmarkdown rstudioapi shiny shinyBS stringr usethis whoami withr yaml]; }; + ymlthis = derive2 { name="ymlthis"; version="0.1.2"; sha256="01jfkf9ymj8p0gvcd491i7rfaw3mj101jqbkbxmwhv7rl4r2vmql"; depends=[crayon fs glue magrittr miniUI purrr rlang rmarkdown rstudioapi shiny shinyBS stringr usethis whoami withr yaml]; }; yonder = derive2 { name="yonder"; version="0.2.0"; sha256="1ilzn17w6skd0dhwxyrgnfzyazafp8hsi8q6pfxz6k16cd668mc0"; depends=[htmltools magrittr shiny]; }; yorkr = derive2 { name="yorkr"; version="0.0.7"; sha256="035pmvignq4lip3y5670kxj1n70ff04yy2jwi4837pimr9d0qjhv"; depends=[dplyr ggplot2 gridExtra reshape2 rpart_plot yaml]; }; youtubecaption = derive2 { name="youtubecaption"; version="0.1.3"; sha256="03xndrs28qlbr9bywbxxx110gsp0n36wqvf98ys7ypmlj6vki4ya"; depends=[dplyr magrittr purrr reticulate stringr tibble writexl]; }; - ypr = derive2 { name="ypr"; version="0.4.0"; sha256="15cjfghpamyfa9zkjrpvxbh487acg8yd21dn6z3r73nc9zmlnb2a"; depends=[chk ggplot2 lifecycle purrr scales yesno]; }; - yuima = derive2 { name="yuima"; version="1.8.1"; sha256="1jzk3623c1cpw9j8d9b96x6n0jwz8h2izzhrdp01cwwskbnv3hq2"; depends=[boot cubature expm mvtnorm Rcpp RcppArmadillo zoo]; }; + ypr = derive2 { name="ypr"; version="0.5.0"; sha256="1as8i61sc6xasjb36kcfhpac4180558qqyg862qxh5f1i4b77jm7"; depends=[chk ggplot2 lifecycle purrr scales yesno]; }; + yuima = derive2 { name="yuima"; version="1.9.6"; sha256="1iqcv6m2lbdnpkcmgbmjhdn233pq3b2g6s9naiq3ks0fyv04zpar"; depends=[boot cubature expm glassoFast mvtnorm Rcpp RcppArmadillo zoo]; }; yuimaGUI = derive2 { name="yuimaGUI"; version="1.3.0"; sha256="1znwfkhnmv9m32izikziqpgxx8gpw50786r81va808x7q058cp5n"; depends=[DT ggplot2 ghyp plotly quantmod sde shiny shinyBS shinydashboard shinyjs yuima]; }; yum = derive2 { name="yum"; version="0.0.1"; sha256="1q8yxn18nia7jh6g2016hxm81d2jak8pwylr6nai9kfynv9wri0g"; depends=[yaml]; }; yummlyr = derive2 { name="yummlyr"; version="0.1.1"; sha256="0xrk6g58laksz92d8mxck923sk4j92g55szrkxk123wjp5kg9vx6"; depends=[httr jsonlite]; }; - zCompositions = derive2 { name="zCompositions"; version="1.3.3-1"; sha256="0cad8dwl9by3f696rxqp2liqy00nczx9z21s1vbn2hq6xngd3i5p"; depends=[MASS NADA truncnorm]; }; + zCompositions = derive2 { name="zCompositions"; version="1.3.4"; sha256="15cfqk1vzamz66y9idnrwxlrp2sirkp44gwkcmia4s13x5pwh8mf"; depends=[MASS NADA truncnorm]; }; zFactor = derive2 { name="zFactor"; version="0.1.9"; sha256="1x0cfcmnmpb8dq6wn6538ghlz9cm00grv54dj91hvb09i96cp95x"; depends=[covr data_table dplyr ggplot2 knitcitations logging rootSolve tibble tidyr]; }; zTree = derive2 { name="zTree"; version="1.0.6"; sha256="1mywxrx6bw7dzhrdwyxbjzc8ikgvw423zycyji0jjr69cfhpmywv"; depends=[plyr]; }; + zalpha = derive2 { name="zalpha"; version="0.1.0"; sha256="12bzdsgjcpg2fqgygx0y6hyygd4yww2c7vpnxksgkgr0gscilksg"; depends=[]; }; zbank = derive2 { name="zbank"; version="0.1.0"; sha256="0vzvlri3sncvbz2cdg8wzlpskm1lq9ji0jrfy5cx4ib19m6gxhpc"; depends=[crul jsonlite tibble]; }; zeallot = derive2 { name="zeallot"; version="0.1.0"; sha256="1sd1igcfnv27pa3bqxlbyxchi562h7grnjg1l7wxx3bwr49i57s3"; depends=[]; }; zebu = derive2 { name="zebu"; version="0.1.2"; sha256="0f9fsb4z8s7k5jnz2ayd52dzri0z46kjbm0gi5rfqjlmk13bhgk4"; depends=[foreach ggplot2 iterators plyr reshape2]; }; zeitgebr = derive2 { name="zeitgebr"; version="0.3.3"; sha256="1g2bqc1xx42q54i6ck0ihpxkzw3hmxqn3cvv416afjc0cm45zw8d"; depends=[behavr data_table lomb pracma]; }; - zeligverse = derive2 { name="zeligverse"; version="0.1.1"; sha256="1hf3hbgzdlhhyy2gvg984dwp8d0qm0ziyn8i9h5x00gwf74vn9dr"; depends=[Amelia dplyr MatchIt purrr rstudioapi tibble WhatIf Zelig ZeligChoice ZeligEI]; }; zen4R = derive2 { name="zen4R"; version="0.3"; sha256="029wjw0bay9p4fgd4rnmqzhrpn5q2azx0w9fvlr4mcsnwzjk9kib"; depends=[httr jsonlite R6 rvest xml2]; }; zendeskR = derive2 { name="zendeskR"; version="0.4"; sha256="06cjwk08w3x6dx717123psinid5bx6c563jnfn890373jw6xnfrk"; depends=[RCurl rjson]; }; - zenplots = derive2 { name="zenplots"; version="1.0.0"; sha256="0jz7b52caymsw010dbls5rbakkilmkl6jnnhwbizybllnf2dg578"; depends=[graph loon MASS PairViz]; }; zeroEQpart = derive2 { name="zeroEQpart"; version="0.1.0"; sha256="1n24nqyl0irpyspwx4b73xy228a84aa8zsn9fcf2lrlni5vyzmm0"; depends=[MASS ppcor]; }; zetadiv = derive2 { name="zetadiv"; version="1.1.1"; sha256="0laxp2pd5s0s9wcnvs1r4shid2gi8ap4y9py6gpl207ywq6cxmgz"; depends=[car glm2 Imap mgcv nnls scam vegan]; }; zfa = derive2 { name="zfa"; version="1.0"; sha256="0lddwpifkzggzvy56ans5pfknfr8laxcg264f3ph2z150gw1plsh"; depends=[SKAT]; }; @@ -15354,9 +15373,10 @@ in with self; { zooimage = derive2 { name="zooimage"; version="5.5.2"; sha256="0ck8w0zb9l1n9xvjwqshq9q9l8pigy3yslq2hnfbgcwk17kk9mp8"; depends=[digest DT filehash jpeg MASS mda mlearning png shiny svDialogs svMisc tiff]; }; zoom = derive2 { name="zoom"; version="2.0.4"; sha256="03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"; depends=[]; }; zoomgrid = derive2 { name="zoomgrid"; version="1.0.0"; sha256="1bjm2b1ll5ikym21ia7k6gfiw1bcplcn4p6fls2298nf20q63kaa"; depends=[]; }; - zoon = derive2 { name="zoon"; version="0.6.4"; sha256="1pdhsglp5w2y2pm4irnp849389iakvp03942hhgl9dzc93ad2k14"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap SDMTools sp testthat]; }; + zoon = derive2 { name="zoon"; version="0.6.5"; sha256="02y29vr2yn8al69km8faiqrwjrc1r3hsvw3dg8lwjr65cxw1krip"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap sp testthat]; }; zscorer = derive2 { name="zscorer"; version="0.3.1"; sha256="0aijhs0fyird5gq68x4dxchb02mxa7ijk10k9zjhngghxbjj7iqn"; depends=[shiny]; }; ztable = derive2 { name="ztable"; version="0.2.0"; sha256="0g7khk5ifsdh9p31wlwh2l5mn1hzxzpv6qcn1wh34vsfjdmijjwy"; depends=[flextable magrittr moonBook officer RColorBrewer scales stringr]; }; ztype = derive2 { name="ztype"; version="0.1.0"; sha256="0brbq2rgkl4mhjbb70kkfv47lzs66k9ppfs2klavcbripirxn5fx"; depends=[assertthat dplyr ggplot2 lubridate magrittr rvest stringr]; }; zyp = derive2 { name="zyp"; version="0.10-1.1"; sha256="03cxpkfbhrx1fy8l0dl9a13ghz93cqq6877wa8rig09ksdiivaw9"; depends=[Kendall]; }; + zzlite = derive2 { name="zzlite"; version="0.1.2"; sha256="0vi1slx2s4r5zf82lazqv0c3m12xq73wlgsbz6af4y00h0bkr3ps"; depends=[httr jsonlite]; }; } diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index d340f3c46365e..06e50a514de66 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -47,13 +47,17 @@ let "mirror://bioc/${biocVersion}/bioc/src/contrib/Archive/${name}_${version}.tar.gz" ]; }; deriveBiocAnn = mkDerive { - mkHomepage = {name, ...}: "http://www.bioconductor.org/packages/${name}.html"; + mkHomepage = {name, biocVersion, ...}: "https://bioconductor.org/packages/${biocVersion}/data/annotation/html/${name}.html"; mkUrls = {name, version, biocVersion}: [ "mirror://bioc/${biocVersion}/data/annotation/src/contrib/${name}_${version}.tar.gz" ]; }; deriveBiocExp = mkDerive { - mkHomepage = {name, ...}: "http://www.bioconductor.org/packages/${name}.html"; + mkHomepage = {name, biocVersion, ...}: "http://www.bioconductor.org/packages/${biocVersion}/data/experiment/html/${name}.html"; mkUrls = {name, version, biocVersion}: [ "mirror://bioc/${biocVersion}/data/experiment/src/contrib/${name}_${version}.tar.gz" ]; }; + deriveBiocWrk = mkDerive { # not available on mirrors afaik + mkHomepage = {name, biocVersion, ...}: "https://www.bioconductor.org/packages/${biocVersion}/workflows/html/${name}.html"; + mkUrls = {name, version, biocVersion}: [ "https://www.bioconductor.org/packages/${biocVersion}/workflows/src/contrib/${name}_${version}.tar.gz"]; + }; deriveCran = mkDerive { mkHomepage = {name, snapshot, ...}: "http://mran.revolutionanalytics.com/snapshot/${snapshot}/web/packages/${name}/"; mkUrls = {name, version, snapshot}: [ "http://mran.revolutionanalytics.com/snapshot/${snapshot}/src/contrib/${name}_${version}.tar.gz" ]; @@ -202,7 +206,7 @@ let defaultOverrides = old: new: let old0 = old; in let - old1 = old0 // (overrideRequireX packagesRequireingX old0); + old1 = old0 // (overrideRequireX packagesRequiringX old0); old2 = old1 // (overrideSkipCheck packagesToSkipCheck old1); old3 = old2 // (overrideRDepends packagesWithRDepends old2); old4 = old3 // (overrideNativeBuildInputs packagesWithNativeBuildInputs old3); @@ -217,244 +221,244 @@ let # packages in `_self` may depends on overridden packages. self = (defaultOverrides _self self) // overrides; _self = { inherit buildRPackage; } // - import ./bioc-packages.nix { inherit self; derive = deriveBioc; } // + import ./bioc-packages.nix { inherit self; derive = deriveBioc; } // import ./bioc-annotation-packages.nix { inherit self; derive = deriveBiocAnn; } // import ./bioc-experiment-packages.nix { inherit self; derive = deriveBiocExp; } // - import ./cran-packages.nix { inherit self; derive = deriveCran; }; + import ./bioc-workflows-packages.nix { inherit self; derive = deriveBiocWrk; } // + import ./cran-packages.nix { inherit self; derive = deriveCran; }; # tweaks for the individual packages and "in self" follow packagesWithRDepends = { - FactoMineR = [ self.car ]; - pander = [ self.codetools ]; + #pander = [ self.codetools ]; + # if R deps are missing for some reason, add them here. For example ... + # vsn = with self; [ lattice ggplot2 ]; + tesseract = [ self.pdftools ]; }; packagesWithNativeBuildInputs = { - abn = [ pkgs.gsl_1 ]; - adimpro = [ pkgs.imagemagick ]; - animation = [ pkgs.which ]; - audio = [ pkgs.portaudio ]; BayesSAE = [ pkgs.gsl_1 ]; BayesVarSel = [ pkgs.gsl_1 ]; BayesXsrc = [ pkgs.readline.dev pkgs.ncurses ]; - bigGP = [ pkgs.openmpi ]; - bio3d = [ pkgs.zlib ]; BiocCheck = [ pkgs.which ]; Biostrings = [ pkgs.zlib ]; - bnpmr = [ pkgs.gsl_1 ]; - cairoDevice = [ pkgs.gtk2.dev ]; + BitSeq = [ pkgs.zlib.dev pkgs.curl.dev ]; Cairo = [ pkgs.libtiff pkgs.libjpeg pkgs.cairo.dev pkgs.x11 pkgs.fontconfig.lib ]; Cardinal = [ pkgs.which ]; - chebpol = [ pkgs.fftw ]; ChemmineOB = [ pkgs.openbabel pkgs.pkgconfig ]; + DiffBind = [ pkgs.zlib.dev pkgs.curl.dev ]; + EMCluster = [ pkgs.liblapack ]; + Formula = [ pkgs.gmp ]; + GLAD = [ pkgs.gsl_1 ]; + HDF5Array = [ pkgs.zlib.dev ]; + HiCseg = [ pkgs.gsl_1 ]; + JavaGD = [ pkgs.jdk ]; + KFKSDS = [ pkgs.gsl_1 ]; + ModelMetrics = lib.optional stdenv.isDarwin pkgs.llvmPackages.openmp; + PKI = [ pkgs.openssl.dev ]; + R2SWF = [ pkgs.zlib pkgs.libpng pkgs.freetype.dev ]; + RAppArmor = [ pkgs.libapparmor ]; + RGtk2 = [ pkgs.gtk2.dev ]; + RMySQL = [ pkgs.zlib pkgs.libmysqlclient pkgs.openssl.dev ]; + RNetCDF = [ pkgs.netcdf pkgs.udunits ]; + RODBC = [ pkgs.libiodbc ]; + RPostgreSQL = [ pkgs.postgresql pkgs.postgresql ]; + RProtoBuf = [ pkgs.protobuf ]; + RSclient = [ pkgs.openssl.dev ]; + RVowpalWabbit = [ pkgs.zlib.dev pkgs.boost ]; + RcppCNPy = [ pkgs.zlib.dev ]; + RcppGSL = [ pkgs.gsl_1 ]; + RcppZiggurat = [ pkgs.gsl_1 ]; + Rglpk = [ pkgs.glpk ]; + Rhdf5lib = [ pkgs.zlib.dev ]; + Rhpc = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.openmpi pkgs.pcre.dev ]; + Rhtslib = [ pkgs.zlib.dev pkgs.automake pkgs.autoconf pkgs.bzip2.dev pkgs.lzma.dev pkgs.curl.dev ] ; + Rlibeemd = [ pkgs.gsl_1 ]; + Rmpfr = [ pkgs.gmp pkgs.mpfr.dev ]; + Rmpi = [ pkgs.openmpi ]; + Rsamtools = [ pkgs.zlib.dev pkgs.curl.dev ]; + Rserve = [ pkgs.openssl ]; + Rssa = [ pkgs.fftw.dev ]; + Rsubread = [ pkgs.zlib.dev ]; + SAVE = [ pkgs.zlib pkgs.bzip2 pkgs.icu pkgs.lzma pkgs.pcre ]; + ShortRead = [ pkgs.zlib.dev ]; + TAQMNGR = [ pkgs.zlib.dev ]; + TKF = [ pkgs.gsl_1 ]; + V8 = [ pkgs.v8 ]; + VariantAnnotation = [ pkgs.zlib.dev ]; + XBRL = [ pkgs.zlib pkgs.libxml2.dev ]; + XML = [ pkgs.libtool pkgs.libxml2.dev pkgs.xmlsec pkgs.libxslt ]; + XVector = [ pkgs.zlib.dev ]; + abn = [ pkgs.gsl_1 ]; + adimpro = [ pkgs.imagemagick ]; + affyPLM = [ pkgs.zlib.dev ]; + affyio = [ pkgs.zlib.dev ]; + animation = [ pkgs.which ]; + audio = [ pkgs.portaudio ]; + bamsignals = [ pkgs.zlib.dev pkgs.curl.dev ]; + bigGP = [ pkgs.openmpi ]; + bio3d = [ pkgs.zlib.dev ]; + bnpmr = [ pkgs.gsl_1 ]; + cairoDevice = [ pkgs.gtk2.dev ]; + chebpol = [ pkgs.fftw ]; cit = [ pkgs.gsl_1 ]; curl = [ pkgs.curl.dev ]; data_table = [pkgs.zlib.dev] ++ lib.optional stdenv.isDarwin pkgs.llvmPackages.openmp; devEMF = [ pkgs.xorg.libXft.dev pkgs.x11 ]; diversitree = [ pkgs.gsl_1 pkgs.fftw ]; - EMCluster = [ pkgs.liblapack ]; fftw = [ pkgs.fftw.dev ]; fftwtools = [ pkgs.fftw.dev ]; - Formula = [ pkgs.gmp ]; - geoCount = [ pkgs.gsl_1 ]; gdtools = [ pkgs.cairo.dev pkgs.fontconfig.lib pkgs.freetype.dev ]; git2r = [ pkgs.zlib.dev pkgs.openssl.dev pkgs.libssh2.dev pkgs.libgit2 pkgs.pkgconfig ]; - GLAD = [ pkgs.gsl_1 ]; glpkAPI = [ pkgs.gmp pkgs.glpk ]; + gmapR = [ pkgs.zlib.dev ]; gmp = [ pkgs.gmp.dev ]; graphscan = [ pkgs.gsl_1 ]; - gsl = [ pkgs.gsl_1 ]; + gsl = [ pkgs.gsl ]; + hdf5r = [ pkgs.hdf5.dev]; + h5vc = [ pkgs.zlib.dev pkgs.curl.dev ]; haven = [ pkgs.libiconv pkgs.zlib.dev ]; - h5vc = [ pkgs.zlib.dev ]; - HiCseg = [ pkgs.gsl_1 ]; - imager = [ pkgs.x11 ]; iBMQ = [ pkgs.gsl_1 ]; igraph = [ pkgs.gmp pkgs.libxml2.dev ]; - JavaGD = [ pkgs.jdk ]; + imager = [ pkgs.x11 ]; jpeg = [ pkgs.libjpeg.dev ]; jqr = [ pkgs.jq.dev ]; - KFKSDS = [ pkgs.gsl_1 ]; + lwgeom = [ pkgs.proj.dev pkgs.geos ]; kza = [ pkgs.fftw.dev ]; magick = [ pkgs.imagemagick.dev ]; - ModelMetrics = lib.optional stdenv.isDarwin pkgs.llvmPackages.openmp; mvabund = [ pkgs.gsl_1 ]; mwaved = [ pkgs.fftw.dev ]; ncdf4 = [ pkgs.netcdf ]; nloptr = [ pkgs.nlopt pkgs.pkgconfig ]; odbc = [ pkgs.unixODBC ]; + oligo = [ pkgs.zlib.dev ]; outbreaker = [ pkgs.gsl_1 ]; pander = [ pkgs.pandoc pkgs.which ]; pbdMPI = [ pkgs.openmpi ]; pbdNCDF4 = [ pkgs.netcdf ]; pbdPROF = [ pkgs.openmpi ]; pbdZMQ = lib.optionals stdenv.isDarwin [ pkgs.which ]; - pdftools = [ pkgs.poppler.dev ]; + pdftools = [ pkgs.poppler pkgs.libjpeg.dev]; phytools = [ pkgs.which ]; - PKI = [ pkgs.openssl.dev ]; png = [ pkgs.libpng.dev ]; - proj4 = [ pkgs.proj ]; + proj4 = [ pkgs.proj.dev ]; protolite = [ pkgs.protobuf ]; - qtbase = [ pkgs.qt4 ]; + qtbase = [ pkgs.qt4.dev ]; qtpaint = [ pkgs.qt4 ]; - R2SWF = [ pkgs.zlib pkgs.libpng pkgs.freetype.dev ]; - RAppArmor = [ pkgs.libapparmor ]; - rapportools = [ pkgs.which ]; + rJava = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.pcre.dev pkgs.jdk pkgs.libzip ]; + rPython = [ pkgs.python ]; rapport = [ pkgs.which ]; - readxl = [ pkgs.libiconv ]; + rapportools = [ pkgs.which ]; rcdd = [ pkgs.gmp.dev ]; - RcppCNPy = [ pkgs.zlib.dev ]; - RcppGSL = [ pkgs.gsl_1 ]; - RcppZiggurat = [ pkgs.gsl_1 ]; + readxl = [ pkgs.libiconv ]; reprex = [ pkgs.which ]; rgdal = [ pkgs.proj.dev pkgs.gdal ]; rgeos = [ pkgs.geos ]; rggobi = [ pkgs.ggobi pkgs.gtk2.dev pkgs.libxml2.dev ]; - Rglpk = [ pkgs.glpk ]; - RGtk2 = [ pkgs.gtk2.dev ]; rhdf5 = [ pkgs.zlib ]; - Rhdf5lib = [ pkgs.zlib ]; - Rhpc = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.openmpi pkgs.pcre.dev ]; - Rhtslib = [ pkgs.zlib.dev pkgs.automake pkgs.autoconf ]; rjags = [ pkgs.jags ]; - rJava = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.pcre.dev pkgs.jdk pkgs.libzip ]; - Rlibeemd = [ pkgs.gsl_1 ]; rmatio = [ pkgs.zlib.dev ]; - Rmpfr = [ pkgs.gmp pkgs.mpfr.dev ]; - Rmpi = [ pkgs.openmpi ]; - RMySQL = [ pkgs.zlib pkgs.libmysqlclient pkgs.openssl.dev ]; - RNetCDF = [ pkgs.netcdf pkgs.udunits ]; - RODBCext = [ pkgs.libiodbc ]; - RODBC = [ pkgs.libiodbc ]; rpanel = [ pkgs.bwidget ]; rpg = [ pkgs.postgresql ]; - rphast = [ pkgs.pcre.dev pkgs.zlib pkgs.bzip2 pkgs.gzip pkgs.readline ]; - Rpoppler = [ pkgs.poppler ]; - RPostgreSQL = [ pkgs.postgresql pkgs.postgresql ]; - RProtoBuf = [ pkgs.protobuf ]; - rPython = [ pkgs.python ]; - RSclient = [ pkgs.openssl.dev ]; - Rserve = [ pkgs.openssl ]; - Rssa = [ pkgs.fftw.dev ]; - rtfbs = [ pkgs.zlib pkgs.pcre.dev pkgs.bzip2 pkgs.gzip pkgs.readline ]; rtiff = [ pkgs.libtiff.dev ]; + rtracklayer = [ pkgs.zlib.dev ]; runjags = [ pkgs.jags ]; - RVowpalWabbit = [ pkgs.zlib.dev pkgs.boost ]; rzmq = [ pkgs.zeromq3 ]; - SAVE = [ pkgs.zlib pkgs.bzip2 pkgs.icu pkgs.lzma pkgs.pcre ]; sdcTable = [ pkgs.gmp pkgs.glpk ]; seewave = [ pkgs.fftw.dev pkgs.libsndfile.dev ]; seqinr = [ pkgs.zlib.dev ]; seqminer = [ pkgs.zlib.dev pkgs.bzip2 ]; - sf = [ pkgs.gdal pkgs.proj pkgs.geos ]; + sf = [ pkgs.gdal pkgs.proj.dev pkgs.geos ]; showtext = [ pkgs.zlib pkgs.libpng pkgs.icu pkgs.freetype.dev ]; simplexreg = [ pkgs.gsl_1 ]; + snpStats = [ pkgs.zlib.dev ]; spate = [ pkgs.fftw.dev ]; - ssanv = [ pkgs.proj ]; - stsm = [ pkgs.gsl_1 ]; + ssanv = [ pkgs.proj.dev ]; stringi = [ pkgs.icu.dev ]; + stsm = [ pkgs.gsl_1 ]; survSNP = [ pkgs.gsl_1 ]; sysfonts = [ pkgs.zlib pkgs.libpng pkgs.freetype.dev ]; systemfonts = [ pkgs.fontconfig.dev pkgs.freetype.dev ]; - TAQMNGR = [ pkgs.zlib.dev ]; - tesseract = [ pkgs.tesseract pkgs.leptonica ]; + tesseract = [ pkgs.tesseract pkgs.leptonica pkgs.poppler ]; tiff = [ pkgs.libtiff.dev ]; - TKF = [ pkgs.gsl_1 ]; tkrplot = [ pkgs.xorg.libX11 pkgs.tk.dev ]; topicmodels = [ pkgs.gsl_1 ]; udunits2 = [ pkgs.udunits pkgs.expat ]; units = [ pkgs.udunits ]; - V8 = [ pkgs.v8 ]; - WhopGenome = [ pkgs.zlib.dev ]; - XBRL = [ pkgs.zlib pkgs.libxml2.dev ]; xml2 = [ pkgs.libxml2.dev ] ++ lib.optionals stdenv.isDarwin [ pkgs.perl ]; - XML = [ pkgs.libtool pkgs.libxml2.dev pkgs.xmlsec pkgs.libxslt ]; - affyPLM = [ pkgs.zlib.dev ]; - bamsignals = [ pkgs.zlib.dev ]; - BitSeq = [ pkgs.zlib.dev ]; - DiffBind = [ pkgs.zlib ]; - ShortRead = [ pkgs.zlib.dev ]; - oligo = [ pkgs.zlib.dev ]; - gmapR = [ pkgs.zlib.dev ]; - Rsubread = [ pkgs.zlib.dev ]; - XVector = [ pkgs.zlib.dev ]; - Rsamtools = [ pkgs.zlib.dev ]; - rtracklayer = [ pkgs.zlib.dev ]; - affyio = [ pkgs.zlib.dev ]; - VariantAnnotation = [ pkgs.zlib.dev ]; - snpStats = [ pkgs.zlib.dev ]; }; packagesWithBuildInputs = { # sort -t '=' -k 2 - gam = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; - quantreg = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; - rmutil = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; - robustbase = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; - SparseM = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; - svKomodo = [ pkgs.which ]; - nat = [ pkgs.which ]; - nat_templatebrains = [ pkgs.which ]; - pbdZMQ = lib.optionals stdenv.isDarwin [ pkgs.darwin.binutils ]; - RMark = [ pkgs.which ]; - RPushbullet = [ pkgs.which ]; - qtpaint = [ pkgs.cmake ]; - qtbase = [ pkgs.cmake pkgs.perl ]; - RcppEigen = [ pkgs.libiconv ]; - RCurl = [ pkgs.curl.dev ]; + Cairo = [ pkgs.pkgconfig ]; + KernSmooth = [ pkgs.libiconv ]; + Matrix = [ pkgs.libiconv ]; R2SWF = [ pkgs.pkgconfig ]; - rggobi = [ pkgs.pkgconfig ]; - rgl = [ pkgs.libGLU pkgs.libGLU.dev pkgs.libGL pkgs.xlibsWrapper ]; + RCurl = [ pkgs.curl.dev ]; RGtk2 = [ pkgs.pkgconfig ]; + RMark = [ pkgs.which ]; RProtoBuf = [ pkgs.pkgconfig ]; - Rpoppler = [ pkgs.pkgconfig ]; + RPushbullet = [ pkgs.which ]; + RcppEigen = [ pkgs.libiconv ]; + Rpoppler = [ pkgs.pkgconfig pkgs.poppler.dev ]; + Rsymphony = [ pkgs.pkgconfig pkgs.doxygen pkgs.graphviz pkgs.subversion ]; + SparseM = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; + VariantAnnotation = [ pkgs.curl.dev ]; XML = [ pkgs.pkgconfig ]; + adimpro = [ pkgs.which pkgs.xorg.xdpyinfo ]; + ape = [ pkgs.libiconv ]; cairoDevice = [ pkgs.pkgconfig ]; chebpol = [ pkgs.pkgconfig ]; + cluster = [ pkgs.libiconv ]; + expm = [ pkgs.libiconv ]; fftw = [ pkgs.pkgconfig ]; - geoCount = [ pkgs.pkgconfig ]; + gam = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; gdtools = [ pkgs.pkgconfig ]; + glmnet = [ pkgs.libiconv ]; + gridGraphics = [ pkgs.which ]; + igraph = [ pkgs.libiconv ]; jqr = [ pkgs.jq.lib ]; kza = [ pkgs.pkgconfig ]; magick = [ pkgs.pkgconfig ]; + mgcv = [ pkgs.libiconv ]; + minqa = [ pkgs.libiconv ]; + mnormt = [ pkgs.libiconv ]; mwaved = [ pkgs.pkgconfig ]; + mzR = [ pkgs.netcdf pkgs.zlib.dev ]; + nat = [ pkgs.which ]; + nat_templatebrains = [ pkgs.which ]; + nlme = [ pkgs.libiconv ]; odbc = [ pkgs.pkgconfig ]; openssl = [ pkgs.pkgconfig ]; - pdftools = [ pkgs.pkgconfig ]; + pan = [ pkgs.libiconv ]; + pbdZMQ = lib.optionals stdenv.isDarwin [ pkgs.darwin.binutils ]; + phangorn = [ pkgs.libiconv ]; + qpdf = [ pkgs.libjpeg.dev pkgs.zlib.dev ]; + qtbase = [ pkgs.cmake pkgs.perl ]; + qtpaint = [ pkgs.cmake ]; + quadprog = [ pkgs.libiconv ]; + quantreg = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; + rPython = [ pkgs.which ]; + randomForest = [ pkgs.libiconv ]; + rggobi = [ pkgs.pkgconfig ]; + rgl = [ pkgs.libGLU pkgs.libGLU.dev pkgs.libGL pkgs.xlibsWrapper ]; + rmutil = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; + robustbase = lib.optionals stdenv.isDarwin [ pkgs.libiconv ]; sf = [ pkgs.pkgconfig pkgs.sqlite.dev pkgs.proj.dev ]; showtext = [ pkgs.pkgconfig ]; spate = [ pkgs.pkgconfig ]; stringi = [ pkgs.pkgconfig ]; + sundialr = [ pkgs.libiconv ]; + svKomodo = [ pkgs.which ]; sysfonts = [ pkgs.pkgconfig ]; systemfonts = [ pkgs.pkgconfig ]; - tesseract = [ pkgs.pkgconfig ]; - Cairo = [ pkgs.pkgconfig ]; - Rsymphony = [ pkgs.pkgconfig pkgs.doxygen pkgs.graphviz pkgs.subversion ]; tcltk2 = [ pkgs.tcl pkgs.tk ]; + tesseract = [ pkgs.pkgconfig ]; tikzDevice = [ pkgs.which pkgs.texlive.combined.scheme-medium ]; - rPython = [ pkgs.which ]; - gridGraphics = [ pkgs.which ]; - adimpro = [ pkgs.which pkgs.xorg.xdpyinfo ]; - mzR = [ pkgs.netcdf ]; - cluster = [ pkgs.libiconv ]; - KernSmooth = [ pkgs.libiconv ]; - nlme = [ pkgs.libiconv ]; - Matrix = [ pkgs.libiconv ]; - mgcv = [ pkgs.libiconv ]; - minqa = [ pkgs.libiconv ]; - igraph = [ pkgs.libiconv ]; - ape = [ pkgs.libiconv ]; - expm = [ pkgs.libiconv ]; - mnormt = [ pkgs.libiconv ]; - pan = [ pkgs.libiconv ]; - phangorn = [ pkgs.libiconv ]; - quadprog = [ pkgs.libiconv ]; - randomForest = [ pkgs.libiconv ]; - sundialr = [ pkgs.libiconv ]; ucminf = [ pkgs.libiconv ]; - glmnet = [ pkgs.libiconv ]; }; - packagesRequireingX = [ + packagesRequiringX = [ "accrual" "ade4TkGUI" "analogue" @@ -463,14 +467,11 @@ let "AnnotLists" "AnthropMMD" "aplpack" - "aqfig" - "arf3DS4" "asbio" "AtelieR" "BAT" "bayesDem" "BCA" - "BEQI2" "betapart" "BiodiversityR" "bio_infer" @@ -523,7 +524,6 @@ let "gcmr" "geomorph" "geoR" - "geoRglm" "georob" "GGEBiplotGUI" "gnm" @@ -561,7 +561,6 @@ let "miniGUI" "MissingDataGUI" "mixsep" - "mlDNA" "MplusAutomation" "mpmcorrelogram" "mritc" @@ -628,7 +627,6 @@ let "recluster" "relimp" "RenextGUI" - "reportRx" "reshapeGUI" "rgl" "RHRV" @@ -636,7 +634,6 @@ let "RNCEP" "RQDA" "RSDA" - "rsgcc" "RSurvey" "RunuranGUI" "simba" @@ -644,7 +641,6 @@ let "SimpleTable" "SOLOMON" "soundecology" - "spacodiR" "spatsurv" "sqldf" "SRRS" @@ -676,19 +672,24 @@ let "vegan" "vegan3d" "vegclust" - "VIMGUI" "WMCapacity" "x12GUI" - "xergm" ]; packagesToSkipCheck = [ "Rmpi" # tries to run MPI processes "pbdMPI" # tries to run MPI processes + "x12GUI" ]; # Packages which cannot be installed due to lack of dependencies or other reasons. brokenPackages = [ + "bigGP" # openmpi related + "rpanel" # bwidget/Tk issue? + "tesseract" # pdftoools, poppler ? + "RSymphony" # requires pkgs.SYMPHONY + "x12" # looks for path when installing + "x12GUI" # depends on x12 ]; otherOverrides = old: new: { @@ -721,13 +722,12 @@ let preConfigure = "patchShebangs configure"; }); - ggbio = old.ggbio.overrideDerivation (attrs: { - patches = [ - (pkgs.fetchpatch { - url = "https://github.com/tengfei/ggbio/commit/b04a9840cf5c0bd0514db2536f2e610bbd364727.patch"; - sha256 = "blwtObyIYo1UBWz4nlmcJ8Nyw/n0qwmJrtwFWuoUyMg="; - }) - ]; + qtpaint = old.curl.overrideDerivation (attrs: { + preConfigure = "patchShebangs configure"; + }); + + rzmq = old.curl.overrideDerivation (attrs: { + preConfigure = "patchShebangs configure"; }); RcppArmadillo = old.RcppArmadillo.overrideDerivation (attrs: { @@ -748,8 +748,8 @@ let patchPhase = "patchShebangs configure"; }); - BayesXsrc = old.BayesXsrc.overrideDerivation (attrs: { - patches = [ ./patches/BayesXsrc.patch ]; + rpg = old.rpf.overrideDerivation (attrs: { + patchPhase = "patchShebangs configure"; }); Rhdf5lib = old.Rhdf5lib.overrideDerivation (attrs: { @@ -784,10 +784,15 @@ let ''; }); - qtbase = old.qtbase.overrideDerivation (attrs: { - patches = [ ./patches/qtbase.patch ]; + pdftools = old.curl.overrideDerivation (attrs: { + preConfigure = "patchShebangs configure"; }); + # delete? need a run time test + # qtbase = old.qtbase.overrideDerivation (attrs: { + # patches = [ ./patches/qtbase.patch ]; + # }); + Rmpi = old.Rmpi.overrideDerivation (attrs: { configureFlags = [ "--with-Rmpi-type=OPENMPI" @@ -806,11 +811,6 @@ let ]; }); - RAppArmor = old.RAppArmor.overrideDerivation (attrs: { - patches = [ ./patches/RAppArmor.patch ]; - LIBAPPARMOR_HOME = pkgs.libapparmor; - }); - RMySQL = old.RMySQL.overrideDerivation (attrs: { MYSQL_DIR="${pkgs.libmysqlclient}"; preConfigure = '' @@ -831,13 +831,10 @@ let PKG_LIBS = "-L${pkgs.openblasCompat}/lib -lopenblas"; }); - EMCluster = old.EMCluster.overrideDerivation (attrs: { - patches = [ ./patches/EMCluster.patch ]; - }); - - spMC = old.spMC.overrideDerivation (attrs: { - patches = [ ./patches/spMC.patch ]; - }); + # delete? need a run time test to be sure? + # spMC = old.spMC.overrideDerivation (attrs: { + # patches = [ ./patches/spMC.patch ]; + # }); openssl = old.openssl.overrideDerivation (attrs: { PKGCONFIG_CFLAGS = "-I${pkgs.openssl.dev}/include"; diff --git a/pkgs/development/r-modules/generate-r-packages.R b/pkgs/development/r-modules/generate-r-packages.R index 1586b5b16b3a1..4ea4a1d40c4af 100755 --- a/pkgs/development/r-modules/generate-r-packages.R +++ b/pkgs/development/r-modules/generate-r-packages.R @@ -3,16 +3,18 @@ library(data.table) library(parallel) cl <- makeCluster(10) -biocVersion <- 3.8 +biocVersion <- "3.10" snapshotDate <- Sys.Date()-1 mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/bioc/src/contrib/") - , "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/annotation/src/contrib/") - , "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/experiment/src/contrib/") - , cran=paste0("http://mran.revolutionanalytics.com/snapshot/", snapshotDate, "/src/contrib/") + , "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/annotation/src/contrib/") + , "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/experiment/src/contrib/") + , "bioc-workflows"=paste0("http://www.bioconductor.org/packages/", biocVersion, "/workflows/src/contrib/") #need a working url for workflows + , cran=paste0("http://mran.revolutionanalytics.com/snapshot/", snapshotDate, "/src/contrib/") ) mirrorType <- commandArgs(trailingOnly=TRUE)[1] +#mirrorType <- "bioc-workflows" stopifnot(mirrorType %in% names(mirrorUrls)) packagesFile <- paste(mirrorType, 'packages.nix', sep='-') readFormatted <- as.data.table(read.table(skip=8, sep='"', text=head(readLines(packagesFile), -1))) @@ -40,7 +42,6 @@ nixPrefetch <- function(name, version) { cmd <- paste0(cmd, " ; rm -rf '", tmp, "'") system(cmd, intern=TRUE) } - } formatPackage <- function(name, version, sha256, depends, imports, linkingTo) { diff --git a/pkgs/development/r-modules/patches/EMCluster.patch b/pkgs/development/r-modules/patches/EMCluster.patch deleted file mode 100644 index afc9de3a95a91..0000000000000 --- a/pkgs/development/r-modules/patches/EMCluster.patch +++ /dev/null @@ -1,6 +0,0 @@ -diff -ru -x '*~' EMCluster_orig/src/Makevars EMCluster/src/Makevars ---- EMCluster_orig/src/Makevars 2013-07-05 02:43:25.000000000 +0900 -+++ EMCluster/src/Makevars 2014-10-25 18:10:19.190992120 +0900 -@@ -1 +1 @@ --PKG_LIBS = $(FLIBS) $(BLAS_LIBS) $(LAPACK_LIBS) -+PKG_LIBS = $(FLIBS) $(LAPACK_LIBS) $(BLAS_LIBS) diff --git a/pkgs/development/r-modules/patches/RAppArmor.patch b/pkgs/development/r-modules/patches/RAppArmor.patch deleted file mode 100644 index f2dc49bd47664..0000000000000 --- a/pkgs/development/r-modules/patches/RAppArmor.patch +++ /dev/null @@ -1,20 +0,0 @@ -diff -ru -x '*~' RAppArmor_orig/configure RAppArmor/configure ---- RAppArmor_orig/configure 2013-12-17 11:23:00.000000000 +0900 -+++ RAppArmor/configure 2014-10-18 22:22:39.641341244 +0900 -@@ -1,15 +1,2 @@ --if [ ! -e /usr/include/sys/apparmor.h ] --then -- echo "sys/apparmor.h not found. Make sure libapparmor-dev is installed." -- exit 1 --fi -- --LIBFILE=$(/sbin/ldconfig -p | egrep -oh " [-_a-zA-Z0-9/]*/libapparmor.so(.1)?$") -- --if [ -z "$LIBFILE" ] --then -- echo "libapparmor.so not found. Make sure libapparmor-dev is installed." -- exit 1 --fi -- -+LIBFILE="$LIBAPPARMOR_HOME/lib/libapparmor.so.1" - echo "PKG_LIBS="$LIBFILE > src/Makevars diff --git a/pkgs/development/r-modules/patches/Rhdf5lib.patch b/pkgs/development/r-modules/patches/Rhdf5lib.patch index dcd9b61798bd1..dff4b4aa4340a 100644 --- a/pkgs/development/r-modules/patches/Rhdf5lib.patch +++ b/pkgs/development/r-modules/patches/Rhdf5lib.patch @@ -1,12 +1,13 @@ -diff --git a/configure b/configure -index e2d292e..b13c0db 100755 +diff -u --label a/configure --label b/configure --- a/configure +++ b/configure -@@ -2880,6 +2880,7 @@ $MAKE +@@ -3660,6 +3660,7 @@ + echo "building the hdf5 library..."; cd ../; - ## we add the '-w' flag to suppress all the warnings hdf5 prints +sed -i 's#/bin/mv#mv#' configure - ./configure --with-pic --enable-shared=no --enable-cxx \ - --with-szlib \ - CXX="${CXX}" CXFLAGS="${CXXFLAGS} -w" \ + ./configure --with-pic --enable-shared=no --enable-cxx --enable-hl \ + --with-szlib=${SZIP_HOME} --with-zlib=${ZLIB_HOME} \ + CXX="${CXX}" CXXFLAGS="${CXXFLAGS} ${CXXPICFLAGS}" \ + +Diff finished. Mon Mar 16 11:15:35 2020 diff --git a/pkgs/development/r-modules/test-package-build.nix b/pkgs/development/r-modules/test-package-build.nix new file mode 100644 index 0000000000000..0b24fc249706a --- /dev/null +++ b/pkgs/development/r-modules/test-package-build.nix @@ -0,0 +1,508 @@ +# usage: $ nis-shell test-package-build.nix +let + pkgs = import ../../.. {}; + # conda not needed for testing, maybe for debugging. want to avoid needing it at all + conda = pkgs.conda.override { extraPkgs = with pkgs; [ + which # some conda packages rely on this + ]; }; + + rpkgs = with pkgs.rPackages; + [ # some packages I care about + AnnotationDbi + ballgown + DESeq2 + EnsDb_Hsapiens_v79 + EnsDb_Hsapiens_v86 + devtools + dplyr + genefilter + ggplot2 + HDF5Array + hdf5r + knitr + pheatmap + RColorBrewer + Rhdf5lib + readr + rhdf5 + rmarkdown + tidygenomics + tidyr + tximeta + tximport + vsn + xts + + # some bioconductor workflows -- new! + rnaseqGene + simpleSingleCell + RNAseq123 + annotation + rnaseqDTU + + # packagesWithNativeBuildInputs + abn + adimpro + animation + audio + BayesSAE + BayesVarSel + BayesXsrc + #bigGP + bio3d + BiocCheck + Biostrings + bnpmr + cairoDevice + Cairo + Cardinal + chebpol + ChemmineOB + cit + curl + data_table + devEMF + diversitree + EMCluster + fftw + fftwtools + Formula + gdtools + git2r + GLAD + glpkAPI + gmp + graphscan + gsl + haven + h5vc + HiCseg + imager + iBMQ + igraph + JavaGD + jpeg + jqr + KFKSDS + kza + magick + ModelMetrics + mvabund + mwaved + ncdf4 + nloptr + odbc + outbreaker + pander + pbdMPI + pbdNCDF4 + pbdPROF + pbdZMQ + pdftools + phytools + PKI + png + proj4 + protolite + qtbase + qtpaint + R2SWF + RAppArmor + rapportools + rapport + readxl + rcdd + RcppCNPy + RcppGSL + RcppZiggurat + reprex + rgdal + rgeos + rggobi + Rglpk + RGtk2 + rhdf5 + Rhdf5lib + Rhpc + Rhtslib + rjags + rJava + Rlibeemd + rmatio + Rmpfr + Rmpi + RMySQL + RNetCDF + RODBC + #rpanel + rpg + Rpoppler + RPostgreSQL + RProtoBuf + rPython + RSclient + Rsamtools + Rserve + Rssa + rtiff + runjags + RVowpalWabbit + rzmq + SAVE + sdcTable + seewave + seqinr + seqminer + sf + showtext + simplexreg + spate + ssanv + stsm + stringi + survSNP + sysfonts + systemfonts + TAQMNGR + #tesseract + tiff + TKF + tkrplot + topicmodels + udunits2 + units + V8 + XBRL + xml2 + XML + affyPLM + bamsignals + BitSeq + DiffBind + ShortRead + oligo + gmapR + Rsubread + XVector + rtracklayer + affyio + VariantAnnotation + snpStats + + # packagesWithBuildinputs + Cairo + KernSmooth + Matrix + R2SWF + RCurl + RGtk2 + RMark + RProtoBuf + RPushbullet + RcppEigen + Rpoppler + #Rsymphony + SparseM + XML + adimpro + ape + cairoDevice + chebpol + cluster + expm + fftw + gam + gdtools + glmnet + gridGraphics + igraph + jqr + kza + magick + mgcv + minqa + mnormt + mwaved + mzR + nat + nat_templatebrains + nlme + odbc + openssl + pan + pbdZMQ + pdftools + phangorn + qtbase + quadprog + quantreg + rPython + randomForest + rggobi + rgl + rmutil + robustbase + sf + showtext + spate + stringi + sundialr + svKomodo + sysfonts + systemfonts + tcltk2 + #tesseract + tikzDevice + ucminf + + # packagesRequiringX + AnalyzeFMRI + AnnotLists + AnthropMMD + AtelieR + BAT + BCA + BiodiversityR + CCTpack + CommunityCorrelogram + ConvergenceConcepts + DALY + DSpat + Deducer + DeducerPlugInExample + DeducerPlugInScaling + DeducerSpatial + DeducerSurvival + DeducerText + Demerelate + DivMelt + ENiRG + EasyqpcR + EcoVirtual + FD + FFD + FeedbackTS + FreeSortR + GGEBiplotGUI + GPCSIV + GUniFrac + GrammR + GrapheR + GroupSeq + HH + HiveR + IsotopeR + JGR + KappaGUI + LS2Wstat + MareyMap + MergeGUI + MetSizeR + Meth27QC + MicroStrategyR + MissingDataGUI + MplusAutomation + OligoSpecificitySystem + OpenRepGrid + PBSadmb + PBSmodelling + PCPS + PKgraph + PopGenReport + PredictABEL + PrevMap + ProbForecastGOP + RHRV + RNCEP + RQDA + RSDA + RSurvey + RandomFields + Rcmdr + RcmdrPlugin_DoE + RcmdrPlugin_EACSPIR + RcmdrPlugin_EBM + RcmdrPlugin_EZR + RcmdrPlugin_EcoVirtual + RcmdrPlugin_FactoMineR + RcmdrPlugin_HH + RcmdrPlugin_IPSUR + RcmdrPlugin_KMggplot2 + RcmdrPlugin_MA + RcmdrPlugin_MPAStats + RcmdrPlugin_ROC + RcmdrPlugin_SCDA + RcmdrPlugin_SLC + RcmdrPlugin_TeachingDemos + RcmdrPlugin_UCA + RcmdrPlugin_coin + RcmdrPlugin_depthTools + RcmdrPlugin_lfstat + RcmdrPlugin_mosaic + RcmdrPlugin_orloca + RcmdrPlugin_plotByGroup + RcmdrPlugin_pointG + RcmdrPlugin_qual + RcmdrPlugin_sampling + RcmdrPlugin_sos + RcmdrPlugin_steepness + RcmdrPlugin_survival + RcmdrPlugin_temis + RenextGUI + RunuranGUI + SOLOMON + SRRS + SSDforR + STEPCAM + SYNCSA + Simile + SimpleTable + StatDA + SyNet + TIMP + TTAinterfaceTrendAnalysis + TestScorer + VecStatGraphs3D + WMCapacity + accrual + ade4TkGUI + analogue + analogueExtra + aplpack + asbio + bayesDem + betapart + bio_infer + bipartite + biplotbootGUI + blender + cairoDevice + cncaGUI + cocorresp + confidence + constrainedKriging + cpa + dave + detrendeR + dgmb + dpa + dynBiplotGUI + dynamicGraph + exactLoglinTest + fSRM + fat2Lpoly + fbati + feature + fgui + fisheyeR + fit4NM + forams + forensim + fscaret + gWidgets2RGtk2 + gWidgets2tcltk + gWidgetsRGtk2 + gWidgetstcltk + gcmr + geoR + geomorph + georob + gnm + gsubfn + iDynoR + ic50 + in2extRemes + iplots + isopam + likeLTD + logmult + memgene + metacom + migui + miniGUI + mixsep + mpmcorrelogram + mritc + multgee + multibiplotGUI + onemap + paleoMAS + pbatR + pez + phylotools + picante + plotSEMM + plsRbeta + plsRglm + poppr + powerpkg + prefmod + qtbase + qtpaint + r4ss + rAverage + rareNMtests + recluster + relimp + reshapeGUI + rgl + rich + simba + soundecology + spatsurv + sqldf + statcheck + stosim + strvalidator + stylo + svDialogstcltk + svIDE + svSocket + svWidgets + tcltk2 + titan + tkrgl + tkrplot + tmap + tspmeta + twiddler + vcdExtra + vegan + vegan3d + vegclust + #x12GUI + # otherOverrides no duplicates + RcppArmadillo + SamplerCompare + spMC + openssl + websocket + acs + OpenMx + x13binary + geojsonio + rstan + ps + mongolite + rlang + littler + ]; + + my_r = pkgs.rWrapper.override { packages = rpkgs; }; + my_rstudio = pkgs.rstudioWrapper.override { packages = rpkgs;}; + +in + pkgs.mkShell { + buildInputs = with pkgs; + [ #conda + my_r + my_rstudio + texlive.combined.scheme-full # R needs this + pandoc # R needs this + samtools # tool need by some bioconductor packages + ]; + # useful for trying to install broken packages another way + #shellHook ="exec conda-shell"; + } + +