diff --git a/pkgs/by-name/an/androguard/package.nix b/pkgs/by-name/an/androguard/package.nix
new file mode 100644
index 0000000000000..a9e9965f5dfdc
--- /dev/null
+++ b/pkgs/by-name/an/androguard/package.nix
@@ -0,0 +1,12 @@
+{
+  python3Packages,
+}:
+
+let
+  pythonPackages = python3Packages.overrideScope (
+    self: super: {
+      sqlalchemy = self.sqlalchemy_1_4;
+    }
+  );
+in
+pythonPackages.toPythonApplication pythonPackages.androguard
diff --git a/pkgs/by-name/di/diffoscope/package.nix b/pkgs/by-name/di/diffoscope/package.nix
index c3b3324d098b8..3fe649e98b419 100644
--- a/pkgs/by-name/di/diffoscope/package.nix
+++ b/pkgs/by-name/di/diffoscope/package.nix
@@ -84,6 +84,8 @@ let
   python = python3.override {
     self = python;
     packageOverrides = final: prev: {
+      # version 2 breaks dataset and thus androguard
+      sqlalchemy = prev.sqlalchemy_1_4;
       # version 4 or newer would log the following error but tests currently don't fail because radare2 is disabled
       # ValueError: argument TNULL is not a TLSH hex string
       tlsh = prev.tlsh.overridePythonAttrs (
diff --git a/pkgs/by-name/fd/fdroidserver/package.nix b/pkgs/by-name/fd/fdroidserver/package.nix
index 2a77b79e1d5bc..068f4699e8c0e 100644
--- a/pkgs/by-name/fd/fdroidserver/package.nix
+++ b/pkgs/by-name/fd/fdroidserver/package.nix
@@ -2,13 +2,19 @@
   lib,
   fetchFromGitLab,
   python3Packages,
-  python3,
   fetchPypi,
   apksigner,
   installShellFiles,
 }:
 
-python3Packages.buildPythonApplication rec {
+let
+  pythonPackages = python3Packages.overrideScope (
+    self: super: {
+      sqlalchemy = self.sqlalchemy_1_4;
+    }
+  );
+in
+pythonPackages.buildPythonApplication rec {
   pname = "fdroidserver";
   version = "2.4.3";
 
@@ -37,7 +43,7 @@ python3Packages.buildPythonApplication rec {
   '';
 
   preConfigure = ''
-    ${python3.pythonOnBuildForHost.interpreter} setup.py compile_catalog
+    ${pythonPackages.python.pythonOnBuildForHost.interpreter} setup.py compile_catalog
   '';
 
   postInstall = ''
@@ -49,12 +55,12 @@ python3Packages.buildPythonApplication rec {
 
   nativeBuildInputs = [ installShellFiles ];
 
-  build-system = with python3Packages; [
+  build-system = with pythonPackages; [
     setuptools
     babel
   ];
 
-  dependencies = with python3Packages; [
+  dependencies = with pythonPackages; [
     androguard
     biplist
     clint
diff --git a/pkgs/by-name/qu/quark-engine/package.nix b/pkgs/by-name/qu/quark-engine/package.nix
index 9896b7bae9fb1..ddea8d5b50338 100644
--- a/pkgs/by-name/qu/quark-engine/package.nix
+++ b/pkgs/by-name/qu/quark-engine/package.nix
@@ -2,10 +2,20 @@
   lib,
   fetchFromGitHub,
   gitMinimal,
-  python3,
+  python3Packages,
 }:
 
-python3.pkgs.buildPythonApplication rec {
+let
+  pythonPackages = python3Packages.overrideScope (
+    self: super: {
+      pytest-randomly = super.pytest-randomly.overridePythonAttrs {
+        doCheck = false;
+      };
+      sqlalchemy = self.sqlalchemy_1_4;
+    }
+  );
+in
+pythonPackages.buildPythonApplication rec {
   pname = "quark-engine";
   version = "25.6.1";
   pyproject = true;
@@ -17,9 +27,9 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-DAD37fzswY3c0d+ubOCYImxs4qyD4fhC3m2l0iD977A=";
   };
 
-  build-system = with python3.pkgs; [ setuptools ];
+  build-system = with pythonPackages; [ setuptools ];
 
-  dependencies = with python3.pkgs; [
+  dependencies = with pythonPackages; [
     androguard
     click
     colorama
diff --git a/pkgs/development/python-modules/dataset/default.nix b/pkgs/development/python-modules/dataset/default.nix
index 361457eb66e9c..2f1f2cb105cfb 100644
--- a/pkgs/development/python-modules/dataset/default.nix
+++ b/pkgs/development/python-modules/dataset/default.nix
@@ -6,7 +6,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   pythonOlder,
-  sqlalchemy_1_4,
+  sqlalchemy,
 }:
 
 buildPythonPackage rec {
@@ -28,11 +28,9 @@ buildPythonPackage rec {
   ];
 
   dependencies = [
-    (alembic.override { sqlalchemy = sqlalchemy_1_4; })
+    alembic
     banal
-    # SQLAlchemy >= 2.0.0 is unsupported
-    # https://github.com/pudo/dataset/issues/411
-    sqlalchemy_1_4
+    sqlalchemy
   ];
 
   # checks attempt to import nonexistent module 'test.test' and fail
@@ -45,5 +43,8 @@ buildPythonPackage rec {
     homepage = "https://dataset.readthedocs.io";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ xfnw ];
+    # SQLAlchemy >= 2.0.0 is unsupported
+    # https://github.com/pudo/dataset/issues/411
+    broken = lib.versionAtLeast sqlalchemy.version "2.0.0";
   };
 }
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 235eee08a479d..7d71bd16c2e62 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -10048,8 +10048,6 @@ with pkgs;
     useQt6 = true;
   };
 
-  androguard = with python3.pkgs; toPythonApplication androguard;
-
   dejavu_fonts = lowPrio (callPackage ../data/fonts/dejavu-fonts { });
 
   # solve collision for nix-env before https://github.com/NixOS/nix/pull/815