diff --git a/pkgs/development/python-modules/llama-index-readers-file/default.nix b/pkgs/development/python-modules/llama-index-readers-file/default.nix
index f4b441142bfb9..4c5503c66071f 100644
--- a/pkgs/development/python-modules/llama-index-readers-file/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-file/default.nix
@@ -1,30 +1,27 @@
 { lib
 , beautifulsoup4
 , buildPythonPackage
-, fetchPypi
+, fetchFromGitHub
 , llama-index-core
 , poetry-core
 , pymupdf
 , pypdf
-, pythonOlder
+, pytestCheckHook
 , pythonRelaxDepsHook
-, striprtf
 }:
 
 buildPythonPackage rec {
   pname = "llama-index-readers-file";
-  version = "0.1.12";
-  pyproject = true;
+  version = "0.1.7";
+
+  inherit (llama-index-core) src meta;
 
-  disabled = pythonOlder "3.8";
+  pyproject = true;
 
-  src = fetchPypi {
-    pname = "llama_index_readers_file";
-    inherit version;
-    hash = "sha256-YGXL+AsPtdGJVYuLkK273JKsuGFH/KGS2I/MJwStKvM=";
-  };
+  sourceRoot = "${src.name}/llama-index-integrations/readers/${pname}";
 
   pythonRelaxDeps = [
+    "beautifulsoup4"
     "pymupdf"
     "pypdf"
   ];
@@ -33,30 +30,23 @@ buildPythonPackage rec {
     "bs4"
   ];
 
-  build-system = [
+  nativeBuildInputs = [
     poetry-core
     pythonRelaxDepsHook
   ];
 
-  dependencies = [
+  propagatedBuildInputs = [
     beautifulsoup4
     llama-index-core
     pymupdf
     pypdf
-    striprtf
   ];
 
-  # Tests are only available in the mono repo
-  doCheck = false;
+  nativeCheckInputs = [
+    pytestCheckHook
+  ];
 
   pythonImportsCheck = [
     "llama_index.readers.file"
   ];
-
-  meta = with lib; {
-    description = "LlamaIndex Readers Integration for files";
-    homepage = "https://github.com/run-llama/llama_index/tree/main/llama-index-integrations/readers/llama-index-readers-file";
-    license = licenses.mit;
-    maintainers = with maintainers; [ fab ];
-  };
 }
diff --git a/pkgs/development/python-modules/pymupdf/default.nix b/pkgs/development/python-modules/pymupdf/default.nix
index f225524e7e18b..bf40f44732d3b 100644
--- a/pkgs/development/python-modules/pymupdf/default.nix
+++ b/pkgs/development/python-modules/pymupdf/default.nix
@@ -30,12 +30,7 @@
 
 let
   # PyMuPDF needs the C++ bindings generated
-  mupdf-cxx = mupdf.override {
-    enableOcr = true;
-    enableCxx = true;
-    enablePython = true;
-    python3 = python;
-  };
+  mupdf-cxx = mupdf.override { enableOcr = true; enableCxx = true; enablePython = true; python3 = python; };
 in buildPythonPackage rec {
   pname = "pymupdf";
   version = "1.23.26";
@@ -50,12 +45,12 @@ in buildPythonPackage rec {
     hash = "sha256-m2zq04+PDnlzFuqeSt27UhdHXTHxpHdMPIg5RQl/5bQ=";
   };
 
-  # swig is not wrapped as Python package
+  # swig is not wrapped as python package
   # libclang calls itself just clang in wheel metadata
   postPatch = ''
     substituteInPlace pyproject.toml \
-      --replace-fail '"swig",' "" \
-      --replace-fail "libclang" "clang"
+      --replace '"swig",' "" \
+      --replace "libclang" "clang"
   '';
 
   nativeBuildInputs = [
@@ -100,79 +95,16 @@ in buildPythonPackage rec {
     fonttools
   ];
 
-  preCheck = ''
-    export PATH="$PATH:$out/bin";
-  '';
-
   disabledTests = [
     # fails for indeterminate reasons
-    "test_2548"
-    "test_2753"
-    "test_3020"
-    "test_3050"
-    "test_3058"
-    "test_3177"
-    "test_3186"
     "test_color_count"
-    "test_pilsave"
-    "test_fz_write_pixmap_as_jpeg"
-    # NotImplementedError
-    "test_1824"
-    "test_2093"
-    "test_2093"
-    "test_2108"
-    "test_2182"
-    "test_2182"
-    "test_2246"
-    "test_2270"
-    "test_2270"
-    "test_2391"
-    "test_2788"
-    "test_2861"
-    "test_2871"
-    "test_2886"
-    "test_2904"
-    "test_2922"
-    "test_2934"
-    "test_2957"
-    "test_2969"
-    "test_3070"
-    "test_3131"
-    "test_3140"
-    "test_3209"
-    "test_3209"
-    "test_caret"
-    "test_deletion"
-    "test_file_info"
-    "test_line"
-    "test_page_links_generator"
-    "test_polyline"
-    "test_redact"
-    "test_techwriter_append"
-    "test_text2"
-    # Issue with FzArchive
-    "test_htmlbox"
-    "test_2246"
-    "test_3140"
-    "test_fit_springer"
-    "test_write_stabilized_with_links"
-    "test_textbox"
-    "test_delete_image"
-    # Fonts not available
-    "test_fontarchive"
-    "test_subset_fonts"
-    # Exclude lint tests
-    "test_flake8"
+    "test_2753"
+    "test_2548"
   ] ++ lib.optionals stdenv.isDarwin [
     # darwin does not support OCR right now
     "test_tesseract"
   ];
 
-  disabledTestPaths = [
-    # Issue with FzArchive
-    "tests/test_docs_samples.py"
-  ];
-
   pythonImportsCheck = [
     "fitz"
     "fitz_old"