diff --git a/pkgs/applications/editors/vscode/extensions/default.nix b/pkgs/applications/editors/vscode/extensions/default.nix
index 551d898cdf565..fa8353459d3c5 100644
--- a/pkgs/applications/editors/vscode/extensions/default.nix
+++ b/pkgs/applications/editors/vscode/extensions/default.nix
@@ -1709,9 +1709,7 @@ let
         };
       };
 
-      ms-python.python = callPackage ./python {
-        extractNuGet = callPackage ./python/extract-nuget.nix { };
-      };
+      ms-python.python = callPackage ./python { };
 
       msjsdiag.debugger-for-chrome = buildVscodeMarketplaceExtension {
         mktplcRef = {
diff --git a/pkgs/applications/editors/vscode/extensions/python/default.nix b/pkgs/applications/editors/vscode/extensions/python/default.nix
index 6b12320161716..8ca353c8479ae 100644
--- a/pkgs/applications/editors/vscode/extensions/python/default.nix
+++ b/pkgs/applications/editors/vscode/extensions/python/default.nix
@@ -1,134 +1,44 @@
-{ lib, stdenv, fetchurl, fetchpatch, vscode-utils, extractNuGet
-, icu, curl, openssl, liburcu, lttng-ust, autoPatchelfHook
-, python3, musl
-, pythonUseFixed ? false       # When `true`, the python default setting will be fixed to specified.
-                               # Use version from `PATH` for default setting otherwise.
-                               # Defaults to `false` as we expect it to be project specific most of the time.
-, ctagsUseFixed ? true, ctags  # When `true`, the ctags default setting will be fixed to specified.
-                               # Use version from `PATH` for default setting otherwise.
-                               # Defaults to `true` as usually not defined on a per projet basis.
+{ lib
+, vscode-utils
+, icu
+, python3
+  # When `true`, the python default setting will be fixed to specified.
+  # Use version from `PATH` for default setting otherwise.
+  # Defaults to `false` as we expect it to be project specific most of the time.
+, pythonUseFixed ? false
 }:
 
-assert ctagsUseFixed -> null != ctags;
-
-let
-  liburcu-0-12 = liburcu.overrideAttrs (oldAttrs: rec {
-    version = "0.12.2";
-    src = fetchurl {
-      url = "https://lttng.org/files/urcu/userspace-rcu-${version}.tar.bz2";
-      sha256 = "0yx69kbx9zd6ayjzvwvglilhdnirq4f1x1sdv33jy8bc9wgc3vsf";
-    };
-  });
-
-  lttng-ust-2-10 = (lttng-ust.override {
-    liburcu = liburcu-0-12;
-  }).overrideAttrs (oldAttrs: rec {
-    version = "2.10.5";
-    src = fetchurl {
-      url = "https://lttng.org/files/lttng-ust/lttng-ust-${version}.tar.bz2";
-      sha256 = "0ddwk0nl28bkv2xb78gz16a2bvlpfbjmzwfbgwf5p1cq46dyvy86";
-    };
-    patches = (oldAttrs.patches or []) ++ [
-      # Pull upstream fix for -fno-common toolchain. Without it build fails on
-      # upstream gcc-10 as:
-      #   ld: libustsnprintf.a(libustsnprintf_la-core.o):snprintf/core.c:23: multiple definition of
-      #     `ust_loglevel'; ustctl.o:liblttng-ust-ctl/ustctl.c:80: first defined here
-      (fetchpatch {
-        name = "fno-common.patch";
-        url = "https://github.com/lttng/lttng-ust/commit/21a934df4c683e73e0a66a9afca33573fcf9d789.patch";
-        sha256 = "122lw9rdmr80gmz7814235ibqs47c6pzvg0ryh01805x0cymx74z";
-      })
-    ];
-  });
-
-  pythonDefaultsTo = if pythonUseFixed then "${python3}/bin/python" else "python";
-  ctagsDefaultsTo = if ctagsUseFixed then "${ctags}/bin/ctags" else "ctags";
-
-  # The arch tag comes from 'PlatformName' defined here:
-  # https://github.com/Microsoft/vscode-python/blob/master/src/client/activation/types.ts
-  arch =
-    if stdenv.isLinux && stdenv.isx86_64 then "linux-x64"
-    else if stdenv.isDarwin then "osx-x64"
-    else throw "Only x86_64 Linux and Darwin are supported.";
-
-  languageServerSha256 = {
-    linux-x64 = "1pmj5pb4xylx4gdx4zgmisn0si59qx51n2m1bh7clv29q6biw05n";
-    osx-x64 = "0ishiy1z9dghj4ryh95vy8rw0v7q4birdga2zdb4a8am31wmp94b";
-  }.${arch};
-
-  # version is languageServerVersion in the package.json
-  languageServer = extractNuGet rec {
-    name = "Python-Language-Server";
-    version = "0.5.30";
-
-    src = fetchurl {
-      url = "https://pvsc.azureedge.net/python-language-server-stable/${name}-${arch}.${version}.nupkg";
-      sha256 = languageServerSha256;
-    };
-  };
-in vscode-utils.buildVscodeMarketplaceExtension rec {
+vscode-utils.buildVscodeMarketplaceExtension {
   mktplcRef = {
     name = "python";
     publisher = "ms-python";
-    version = "2022.0.1814523869";
-  };
-
-  vsix = fetchurl {
-    name = "${mktplcRef.publisher}-${mktplcRef.name}.zip";
-    url = "https://github.com/microsoft/vscode-python/releases/download/${mktplcRef.version}/ms-python-release.vsix";
-    sha256 = "sha256-JDaimcOUDo9GuFA3mhbbGLwqZE9ejk8pWYc+9PrRhVk=";
+    version = "2022.11.11881005";
+    sha256 = "sha256-8NH/aWIAwSpVRi3cvBCpvO8MVzIoRaXxADmWp6DuUb8=";
   };
 
-  buildInputs = [
-    icu
-    curl
-    openssl
-  ] ++ lib.optionals stdenv.isLinux [
-    lttng-ust-2-10
-    musl
-  ];
+  buildInputs = [ icu ];
 
-  nativeBuildInputs = [
-    python3.pkgs.wrapPython
-  ] ++ lib.optionals stdenv.isLinux [
-    autoPatchelfHook
-  ];
+  nativeBuildInputs = [ python3.pkgs.wrapPython ];
 
-  pythonPath = with python3.pkgs; [
-    setuptools
+  propagatedBuildInputs = with python3.pkgs; [
+    debugpy
+    isort
+    jedi-language-server
   ];
 
   postPatch = ''
+    # remove bundled python deps and use libs from nixpkgs
+    rm -r pythonFiles/lib
+    mkdir -p pythonFiles/lib/python/
+    ln -s ${python3.pkgs.debugpy}/lib/*/site-packages/debugpy pythonFiles/lib/python/
+    buildPythonPath "$propagatedBuildInputs"
+    for i in pythonFiles/*.py; do
+      patchPythonScript "$i"
+    done
+  '' + lib.optionalString pythonUseFixed ''
     # Patch `packages.json` so that nix's *python* is used as default value for `python.pythonPath`.
     substituteInPlace "./package.json" \
-      --replace "\"default\": \"python\"" "\"default\": \"${pythonDefaultsTo}\""
-
-    # Patch `packages.json` so that nix's *ctags* is used as default value for `python.workspaceSymbols.ctagsPath`.
-    substituteInPlace "./package.json" \
-      --replace "\"default\": \"ctags\"" "\"default\": \"${ctagsDefaultsTo}\""
-
-    # Similar cleanup to what's done in the `debugpy` python package.
-    # This prevent our autopatchelf logic to bark on unsupported binaries (`attach_x86.so`
-    # was problematic) but also should make our derivation less heavy.
-    (
-      cd pythonFiles/lib/python/debugpy/_vendored/pydevd/pydevd_attach_to_process
-      declare kept_aside="${{
-        "x86_64-linux" = "attach_linux_amd64.so";
-        "aarch64-darwin" = "attach_x86_64.dylib";
-        "x86_64-darwin" = "attach_x86_64.dylib";
-      }.${stdenv.hostPlatform.system} or (throw "Unsupported system: ${stdenv.hostPlatform.system}")}"
-      mv "$kept_aside" "$kept_aside.hidden"
-      rm *.so *.dylib *.dll *.exe *.pdb
-      mv "$kept_aside.hidden" "$kept_aside"
-    )
-  '';
-
-  postInstall = ''
-    mkdir -p "$out/$installPrefix/languageServer.${languageServer.version}"
-    cp -R --no-preserve=ownership ${languageServer}/* "$out/$installPrefix/languageServer.${languageServer.version}"
-    chmod -R +wx "$out/$installPrefix/languageServer.${languageServer.version}"
-
-    patchPythonScript "$out/$installPrefix/pythonFiles/lib/python/isort/main.py"
+      --replace "\"default\": \"python\"" "\"default\": \"${python3.interpreter}\""
   '';
 
   meta = with lib; {
diff --git a/pkgs/applications/editors/vscode/extensions/python/extract-nuget.nix b/pkgs/applications/editors/vscode/extensions/python/extract-nuget.nix
deleted file mode 100644
index 1e70cabe0358d..0000000000000
--- a/pkgs/applications/editors/vscode/extensions/python/extract-nuget.nix
+++ /dev/null
@@ -1,15 +0,0 @@
-{ stdenv, unzip }:
-{ name, version, src, ... }:
-
-stdenv.mkDerivation {
-  inherit name version src;
-
-  nativeBuildInputs = [ unzip ];
-  dontBuild = true;
-  unpackPhase = "unzip $src";
-  installPhase = ''
-    mkdir -p "$out"
-    chmod -R +w .
-    find . -mindepth 1 -maxdepth 1 | xargs cp -a -t "$out"
-  '';
-}
diff --git a/pkgs/applications/misc/khal/default.nix b/pkgs/applications/misc/khal/default.nix
index 2b8002d4eb678..b6bb65a0bfffb 100644
--- a/pkgs/applications/misc/khal/default.nix
+++ b/pkgs/applications/misc/khal/default.nix
@@ -27,11 +27,6 @@ with python3.pkgs; buildPythonApplication rec {
     freezegun
   ];
   nativeBuildInputs = [ setuptools-scm sphinx sphinxcontrib_newsfeed installShellFiles ];
-  checkInputs = [
-    glibcLocales
-    pytestCheckHook
-  ];
-  LC_ALL = "en_US.UTF-8";
 
   postInstall = ''
     # shell completions
@@ -51,6 +46,18 @@ with python3.pkgs; buildPythonApplication rec {
 
   doCheck = !stdenv.isAarch64;
 
+  checkInputs = [
+    glibcLocales
+    pytestCheckHook
+  ];
+
+  LC_ALL = "en_US.UTF-8";
+
+  disabledTests = [
+    # timing based
+    "test_etag"
+  ];
+
   meta = with lib; {
     broken = stdenv.isDarwin;
     homepage = "http://lostpackets.de/khal/";
diff --git a/pkgs/applications/networking/powerdns-admin/default.nix b/pkgs/applications/networking/powerdns-admin/default.nix
index 81195c4e212b2..51a51b3fb1c79 100644
--- a/pkgs/applications/networking/powerdns-admin/default.nix
+++ b/pkgs/applications/networking/powerdns-admin/default.nix
@@ -29,7 +29,7 @@ let
   };
 
   pythonDeps = with python.pkgs; [
-    flask flask_assets flask_login flask_sqlalchemy flask_migrate flask-seasurf flask_mail flask-session flask-sslify
+    flask flask_assets flask_login flask-sqlalchemy flask_migrate flask-seasurf flask_mail flask-session flask-sslify
     mysqlclient psycopg2 sqlalchemy
     cffi configobj cryptography bcrypt requests ldap pyotp qrcode dnspython
     gunicorn python3-saml pytz cssmin rjsmin authlib bravado-core
diff --git a/pkgs/applications/version-management/rabbitvcs/default.nix b/pkgs/applications/version-management/rabbitvcs/default.nix
index e274f0b0335e2..66cd7facc1238 100644
--- a/pkgs/applications/version-management/rabbitvcs/default.nix
+++ b/pkgs/applications/version-management/rabbitvcs/default.nix
@@ -9,7 +9,7 @@ python3Packages.buildPythonApplication rec {
     owner = "rabbitvcs";
     repo = "rabbitvcs";
     rev = "v${version}";
-    sha256 = "01cr16zf3gzsci1hhfli79m34fcx5m1pvswl16rkxxn212yc9fhy";
+    hash = "sha256-gVrdf8vQWAGORZqlTS/axs4U7aZlS8OAgPM3iKgqAtM=";
   };
 
   buildInputs = [ gtk3 ];
diff --git a/pkgs/build-support/rust/hooks/maturin-build-hook.sh b/pkgs/build-support/rust/hooks/maturin-build-hook.sh
index 7e2599d922405..41b313280d702 100644
--- a/pkgs/build-support/rust/hooks/maturin-build-hook.sh
+++ b/pkgs/build-support/rust/hooks/maturin-build-hook.sh
@@ -15,7 +15,8 @@ maturinBuildHook() {
       "CC_@rustTargetPlatform@=@ccForHost@" \
       "CXX_@rustTargetPlatform@=@cxxForHost@" \
       maturin build \
-        --cargo-extra-args="-j $NIX_BUILD_CORES --frozen" \
+        --jobs=$NIX_BUILD_CORES \
+        --frozen \
         --target @rustTargetPlatformSpec@ \
         --manylinux off \
         --strip \
diff --git a/pkgs/development/embedded/platformio/core.nix b/pkgs/development/embedded/platformio/core.nix
index 8a775b8251527..9bb197c0bd401 100644
--- a/pkgs/development/embedded/platformio/core.nix
+++ b/pkgs/development/embedded/platformio/core.nix
@@ -6,25 +6,24 @@
 , version, src
 }:
 
-let
-  python = python3.override {
-    packageOverrides = self: super: {
-      starlette = super.starlette.overridePythonAttrs (oldAttrs: rec {
-        version = "0.20.0";
-        src = fetchFromGitHub {
-          owner = "encode";
-          repo = "starlette";
-          rev = version;
-          sha256 = "sha256-bSgPjKqM262PSufz1LHwrdM+uU8xO55Mifv66HRN02Y=";
-        };
-      });
-    };
-  };
-in
-with python.pkgs; buildPythonApplication rec {
+with python3.pkgs; buildPythonApplication rec {
   pname = "platformio";
   inherit version src;
 
+  patches = [
+    ./fix-searchpath.patch
+    ./use-local-spdx-license-list.patch
+    ./missing-udev-rules-nixos.patch
+  ];
+
+  postPatch = ''
+    substitute platformio/package/manifest/schema.py platformio/package/manifest/schema.py \
+      --subst-var-by SPDX_LICENSE_LIST_DATA '${spdx-license-list-data.json}'
+
+    substituteInPlace setup.py \
+      --replace 'uvicorn==%s" % ("0.17.*"' 'uvicorn==%s" % ("0.18.*"'
+  '';
+
   propagatedBuildInputs = [
     aiofiles
     ajsonrpc
@@ -47,15 +46,43 @@ with python.pkgs; buildPythonApplication rec {
     zeroconf
   ];
 
-  HOME = "/tmp";
+  preCheck = ''
+    export HOME=$(mktemp -d)
+    export PATH=$PATH:$out/bin
+  '';
 
   checkInputs = [
     jsondiff
     pytestCheckHook
-    tox
   ];
 
-  pytestFlagsArray = (map (e: "--deselect tests/${e}") [
+  disabledTestPaths = [
+    "tests/commands/pkg/test_install.py"
+    "tests/commands/pkg/test_list.py"
+    "tests/commands/pkg/test_outdated.py"
+    "tests/commands/pkg/test_search.py"
+    "tests/commands/pkg/test_show.py"
+    "tests/commands/pkg/test_uninstall.py"
+    "tests/commands/pkg/test_update.py"
+    "tests/commands/test_boards.py"
+    "tests/commands/test_check.py"
+    "tests/commands/test_platform.py"
+    "tests/commands/test_run.py"
+    "tests/commands/test_test.py"
+    "tests/misc/test_maintenance.py"
+    # requires internet connection
+    "tests/misc/ino2cpp/test_ino2cpp.py"
+  ];
+
+  disabledTests = [
+    # requires internet connection
+    "test_api_cache"
+    "test_ping_internet_ips"
+  ];
+
+  pytestFlagsArray = [
+    "tests"
+  ] ++ (map (e: "--deselect tests/${e}") [
     "commands/pkg/test_exec.py::test_pkg_specified"
     "commands/pkg/test_exec.py::test_unrecognized_options"
     "commands/test_ci.py::test_ci_boards"
@@ -112,45 +139,13 @@ with python.pkgs; buildPythonApplication rec {
     "test_misc.py::test_ping_internet_ips"
     "test_misc.py::test_platformio_cli"
     "test_pkgmanifest.py::test_packages"
-  ]) ++ (map (e: "--ignore=tests/${e}") [
-    "commands/pkg/test_install.py"
-    "commands/pkg/test_list.py"
-    "commands/pkg/test_outdated.py"
-    "commands/pkg/test_search.py"
-    "commands/pkg/test_show.py"
-    "commands/pkg/test_uninstall.py"
-    "commands/pkg/test_update.py"
-    "commands/test_boards.py"
-    "commands/test_check.py"
-    "commands/test_platform.py"
-    "commands/test_run.py"
-    "commands/test_test.py"
-    "commands/test_update.py"
-    "test_ino2cpp.py"
-    "test_maintenance.py"
-  ]) ++ [
-    "tests"
-  ];
-
-  patches = [
-    ./fix-searchpath.patch
-    ./use-local-spdx-license-list.patch
-    ./missing-udev-rules-nixos.patch
-  ];
-
-  postPatch = ''
-    substitute platformio/package/manifest/schema.py platformio/package/manifest/schema.py \
-      --subst-var-by SPDX_LICENSE_LIST_DATA '${spdx-license-list-data.json}'
-
-    substituteInPlace setup.py \
-      --replace "wsproto==1.0.*" "wsproto" \
-      --replace "zeroconf==0.38.*" "zeroconf"
-  '';
+  ]);
 
   meta = with lib; {
     description = "An open source ecosystem for IoT development";
     homepage = "https://platformio.org";
     license = licenses.asl20;
     maintainers = with maintainers; [ mog makefu ];
+    broken = stdenv.isAarch64;
   };
 }
diff --git a/pkgs/development/embedded/platformio/default.nix b/pkgs/development/embedded/platformio/default.nix
index 000c23898ff48..ad2d897af8305 100644
--- a/pkgs/development/embedded/platformio/default.nix
+++ b/pkgs/development/embedded/platformio/default.nix
@@ -4,14 +4,14 @@
 let
   callPackage = newScope self;
 
-  version = "6.0.1";
+  version = "6.0.2";
 
   # pypi tarballs don't contain tests - https://github.com/platformio/platformio-core/issues/1964
   src = fetchFromGitHub {
     owner = "platformio";
     repo = "platformio-core";
     rev = "v${version}";
-    sha256 = "sha256-noLdQctAaMNmfuxI3iybHFx3Q9aTr3gZaUZ+/uO+fnA=";
+    sha256 = "sha256-yfUF9+M45ZSjmB275kTs8+/Q8Q5FMmr63e3Om8dPi2k=";
   };
 
   self = {
diff --git a/pkgs/development/embedded/platformio/missing-udev-rules-nixos.patch b/pkgs/development/embedded/platformio/missing-udev-rules-nixos.patch
index 36af82245c532..2a978496a19ba 100644
--- a/pkgs/development/embedded/platformio/missing-udev-rules-nixos.patch
+++ b/pkgs/development/embedded/platformio/missing-udev-rules-nixos.patch
@@ -5,7 +5,7 @@ index ef1d3bab..445174fc 100644
 @@ -57,6 +57,7 @@ class MissedUdevRules(InvalidUdevRules):
      MESSAGE = (
          "Warning! Please install `99-platformio-udev.rules`. \nMore details: "
-         "https://docs.platformio.org/page/faq.html#platformio-udev-rules"
+         "https://docs.platformio.org/en/latest/core/installation/udev-rules.html"
 +        "On NixOS add the platformio package to services.udev.packages"
      )
  
diff --git a/pkgs/development/interpreters/python/hooks/sphinx-hook.sh b/pkgs/development/interpreters/python/hooks/sphinx-hook.sh
index 0140958b23169..92cc9e52ed210 100644
--- a/pkgs/development/interpreters/python/hooks/sphinx-hook.sh
+++ b/pkgs/development/interpreters/python/hooks/sphinx-hook.sh
@@ -53,5 +53,5 @@ installSphinxPhase() {
     runHook postInstallSphinx
 }
 
-preBuildPhases+=" buildSphinxPhase"
+preDistPhases+=" buildSphinxPhase"
 postPhases+=" installSphinxPhase"
diff --git a/pkgs/development/libraries/libcamera/default.nix b/pkgs/development/libraries/libcamera/default.nix
index 37acf1fc8f03d..3841c205b7b94 100644
--- a/pkgs/development/libraries/libcamera/default.nix
+++ b/pkgs/development/libraries/libcamera/default.nix
@@ -10,6 +10,7 @@
 , openssl
 , libdrm
 , libevent
+, libyaml
 , lttng-ust
 , gst_all_1
 , gtest
@@ -22,12 +23,12 @@
 
 stdenv.mkDerivation {
   pname = "libcamera";
-  version = "unstable-2022-01-03";
+  version = "unstable-2022-07-15";
 
   src = fetchgit {
     url = "https://git.libcamera.org/libcamera/libcamera.git";
-    rev = "1db1e31e664c1f613dc964d8519fe75d67b154b6";
-    hash = "sha256-pXYPIU9xDWA870Gp1Jgizi5xnUHRvTqEq/ofFXdVZdg=";
+    rev = "e9b6b362820338d0546563444e7b1767f5c7044c";
+    hash = "sha256-geqFcMBHcVe7dPdVOal8V2pVItYUdoC+5isISqRG4Wc=";
   };
 
   postPatch = ''
@@ -55,6 +56,9 @@ stdenv.mkDerivation {
     # lttng tracing
     lttng-ust
 
+    # yamlparser
+    libyaml
+
     gtest
   ];
 
diff --git a/pkgs/development/libraries/thrift/default.nix b/pkgs/development/libraries/thrift/default.nix
index cd127b4b0e71d..a4ae0a99f92d7 100644
--- a/pkgs/development/libraries/thrift/default.nix
+++ b/pkgs/development/libraries/thrift/default.nix
@@ -66,6 +66,11 @@ stdenv.mkDerivation rec {
       url = "https://github.com/apache/thrift/commit/54765854873e19b8ba50a0ec8080dd92d8323851.diff";
       sha256 = "wnG2MjY0DtAhVcEdcxu77tDa4T9Xm2pMYZU2wXLx2OA=";
     })
+    (fetchpatch {
+      name = "setuptools-gte-62.1.0.patch";
+      url = "https://github.com/apache/thrift/pull/2635/commits/c41ad9d5119e9bdae1746167e77e224f390f2c42.patch";
+      hash = "sha256-FkErrg/6vXTomS4AsCsld7t+Iccc55ZiDaNjJ3W1km0=";
+    })
   ];
 
   cmakeFlags = [
diff --git a/pkgs/development/python-modules/JPype1/default.nix b/pkgs/development/python-modules/JPype1/default.nix
index 16ef7a71d1b85..698a4165455d6 100644
--- a/pkgs/development/python-modules/JPype1/default.nix
+++ b/pkgs/development/python-modules/JPype1/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "JPype1";
-  version = "1.3.0";
+  version = "1.4.0";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "4fc27dba89750cb0c9d692466341ce60c0fe86a16051091cb5347a37cf884151";
+    sha256 = "sha256-DF9mXuPm4xwn6dLUjdEr9OtP5oWII+ahEgGgNSdMz+E=";
   };
 
   propagatedBuildInputs = lib.optionals (pythonOlder "3.8") [
diff --git a/pkgs/development/python-modules/Mako/default.nix b/pkgs/development/python-modules/Mako/default.nix
index a74f9988ad7aa..8aa3f687dded5 100644
--- a/pkgs/development/python-modules/Mako/default.nix
+++ b/pkgs/development/python-modules/Mako/default.nix
@@ -17,13 +17,13 @@
 
 buildPythonPackage rec {
   pname = "Mako";
-  version = "1.2.0";
+  version = "1.2.1";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-mnx+kiuH2zaGIQz0nV12cDOkHUAQsoTnR2gskr3dizk=";
+    sha256 = "sha256-8FSl/0dDSS8aqezEcXLLM7QrnZk8/8wUbJ3hfnF7Awc=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/absl-py/default.nix b/pkgs/development/python-modules/absl-py/default.nix
index 60c3bcc4e9ceb..402fab32f55a6 100644
--- a/pkgs/development/python-modules/absl-py/default.nix
+++ b/pkgs/development/python-modules/absl-py/default.nix
@@ -8,11 +8,11 @@
 
 buildPythonPackage rec {
   pname = "absl-py";
-  version = "1.0.0";
+  version = "1.1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "ac511215c01ee9ae47b19716599e8ccfa746f2e18de72bdf641b79b22afa27ea";
+    sha256 = "sha256-OqOfiYMpwhVv9SXfppznCeQtd6qxi/SRdxnW8mCqagg=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/acoustics/default.nix b/pkgs/development/python-modules/acoustics/default.nix
index e888d1241a506..f81f382b956e0 100644
--- a/pkgs/development/python-modules/acoustics/default.nix
+++ b/pkgs/development/python-modules/acoustics/default.nix
@@ -12,13 +12,13 @@
 
 buildPythonPackage rec {
   pname = "acoustics";
-  version = "0.2.4.post0";
+  version = "0.2.6";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a162625e5e70ed830fab8fab0ddcfe35333cb390cd24b0a827bcefc5bbcae97d";
+    sha256 = "sha256-0CvMhCUc+i7dPiHH+IXdlj+OjFh/l1wvnU4dmxQrzFI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/agate-sql/default.nix b/pkgs/development/python-modules/agate-sql/default.nix
index c2e741bef1769..827f73f27e7ab 100644
--- a/pkgs/development/python-modules/agate-sql/default.nix
+++ b/pkgs/development/python-modules/agate-sql/default.nix
@@ -5,7 +5,7 @@
 , agate
 , sqlalchemy
 , crate
-, nose
+, pytestCheckHook
 , geojson
 }:
 
@@ -22,15 +22,7 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ agate sqlalchemy ];
 
-  # crate is broken in nixpkgs, with SQLAlchemy > 1.3
-  # Skip tests for now as they rely on it.
-  doCheck = false;
-
-  checkInputs = [ crate nose geojson ];
-
-  checkPhase = ''
-    nosetests
-  '';
+  checkInputs = [ crate geojson pytestCheckHook ];
 
   pythonImportsCheck = [ "agatesql" ];
 
diff --git a/pkgs/development/python-modules/aioftp/default.nix b/pkgs/development/python-modules/aioftp/default.nix
index da0e8021d509b..8f0ef50e7fd09 100644
--- a/pkgs/development/python-modules/aioftp/default.nix
+++ b/pkgs/development/python-modules/aioftp/default.nix
@@ -33,6 +33,10 @@ buildPythonPackage rec {
     trustme
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   disabledTests = lib.optionals stdenv.isDarwin [
     # uses 127.0.0.2, which macos doesn't like
     "test_pasv_connection_pasv_forced_response_address"
diff --git a/pkgs/development/python-modules/aiohomekit/default.nix b/pkgs/development/python-modules/aiohomekit/default.nix
index aa312fb7d0bf3..cff17a065efe6 100644
--- a/pkgs/development/python-modules/aiohomekit/default.nix
+++ b/pkgs/development/python-modules/aiohomekit/default.nix
@@ -1,5 +1,7 @@
 { lib
 , buildPythonPackage
+, aiocoap
+, bleak
 , chacha20poly1305-reuseable
 , commentjson
 , cryptography
@@ -13,16 +15,16 @@
 
 buildPythonPackage rec {
   pname = "aiohomekit";
-  version = "0.7.20";
+  version = "1.1.0";
   format = "pyproject";
 
-  disabled = pythonOlder "3.7";
+  disabled = pythonOlder "3.9";
 
   src = fetchFromGitHub {
     owner = "Jc2k";
     repo = pname;
     rev = "refs/tags/${version}";
-    sha256 = "sha256-g7N+CIBJCMnW4FjN502SahhSpPS1p7AXZvduteHu+Z4=";
+    sha256 = "sha256-tHCkWNWcEsxoznaB8nysEMSx8g6cceNFP+gVB2jqG9g=";
   };
 
   nativeBuildInputs = [
@@ -30,6 +32,8 @@ buildPythonPackage rec {
   ];
 
   propagatedBuildInputs = [
+    aiocoap
+    bleak
     chacha20poly1305-reuseable
     commentjson
     cryptography
diff --git a/pkgs/development/python-modules/aioshelly/default.nix b/pkgs/development/python-modules/aioshelly/default.nix
index 6c6ba7e93ec66..99ae3638e3574 100644
--- a/pkgs/development/python-modules/aioshelly/default.nix
+++ b/pkgs/development/python-modules/aioshelly/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "aioshelly";
-  version = "2.0.0";
+  version = "2.0.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.9";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "home-assistant-libs";
     repo = pname;
     rev = version;
-    hash = "sha256-1bIlK/5UoGq6xTjcpkAkHPBlM+ifZhnbWzGbPRdFGkU=";
+    hash = "sha256-BUKuZza9Jer334LUmU5zmfjg1ISuxg7HETEbUMB80KY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/aioswitcher/default.nix b/pkgs/development/python-modules/aioswitcher/default.nix
index d03cc22ab1eb1..958467823dc14 100644
--- a/pkgs/development/python-modules/aioswitcher/default.nix
+++ b/pkgs/development/python-modules/aioswitcher/default.nix
@@ -41,6 +41,10 @@ buildPythonPackage rec {
     time-machine
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   disabledTests = [
     # AssertionError: Expected <14:00> to be equal to <17:00>, but was not.
     "test_schedule_parser_with_a_weekly_recurring_enabled_schedule_data"
diff --git a/pkgs/development/python-modules/aiosyncthing/default.nix b/pkgs/development/python-modules/aiosyncthing/default.nix
index 7bbf740c78e86..624c86fb314b5 100644
--- a/pkgs/development/python-modules/aiosyncthing/default.nix
+++ b/pkgs/development/python-modules/aiosyncthing/default.nix
@@ -34,6 +34,10 @@ buildPythonPackage rec {
     pytest-mock
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   postPatch = ''
     substituteInPlace pyproject.toml \
       --replace " --cov=aiosyncthing --cov-report=html" ""
diff --git a/pkgs/development/python-modules/aiounittest/default.nix b/pkgs/development/python-modules/aiounittest/default.nix
index 6b736b416ee9a..d2f9ad9169045 100644
--- a/pkgs/development/python-modules/aiounittest/default.nix
+++ b/pkgs/development/python-modules/aiounittest/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "aiounittest";
-  version = "1.4.1";
+  version = "1.4.2";
   disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "kwarunek";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-FixGF1JLJVqTgLaWugbeu8f+SDjpHSdSLoGklYBup4M=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-7lDOI1SHPpRZLTHRTmfbKlZH18T73poJdFyVmb+HKms=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/alembic/default.nix b/pkgs/development/python-modules/alembic/default.nix
index ea8f4d4d1318a..aefe80a3b0b34 100644
--- a/pkgs/development/python-modules/alembic/default.nix
+++ b/pkgs/development/python-modules/alembic/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "alembic";
-  version = "1.7.7";
+  version = "1.8.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-SWEkgXPq186KIe+z3jePE7g5jmYw+rDrJY3HSoryTFg=";
+    sha256 = "sha256-zQteRbFLcGQmuDPwY2m5ptXuA/gm7DI4cjzoyq9uX/o=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/amazon-ion/default.nix b/pkgs/development/python-modules/amazon-ion/default.nix
index e8e63f41b62e7..0e97eda4701f2 100644
--- a/pkgs/development/python-modules/amazon-ion/default.nix
+++ b/pkgs/development/python-modules/amazon-ion/default.nix
@@ -1,6 +1,6 @@
 { lib
 , buildPythonPackage
-, fetchPypi
+, fetchFromGitHub
 , jsonconversion
 , six
 , pytestCheckHook
@@ -9,15 +9,18 @@
 
 buildPythonPackage rec {
   pname = "amazon-ion";
-  version = "0.9.1";
+  version = "0.9.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
-  src = fetchPypi {
-    pname = "amazon.ion";
-    inherit version;
-    hash = "sha256-Moq1e7LmI0L7DHg6UNYvseEDbqdL23aCwL38wDm3yCA=";
+  # test vectors require git submodule
+  src = fetchFromGitHub {
+    owner = "amzn";
+    repo = "ion-python";
+    rev = "v${version}";
+    fetchSubmodules = true;
+    hash = "sha256-BLlKxm63KsmMFajS4uJne/LPNXboOfy4uVm8HqO9Wfo=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/amqtt/default.nix b/pkgs/development/python-modules/amqtt/default.nix
index 7458ca11e99da..71c07c07cc9bc 100644
--- a/pkgs/development/python-modules/amqtt/default.nix
+++ b/pkgs/development/python-modules/amqtt/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "amqtt";
-  version = "unstable-2022-01-11";
+  version = "unstable-2022-05-29";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -25,8 +25,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "Yakifo";
     repo = pname;
-    rev = "8961b8fff57007a5d9907b98bc555f0519974ce9";
-    hash = "sha256-3uwz4RSoa6KRC8mlVfeIMLPH6F2kOJjQjjXCrnVX0Jo=";
+    rev = "09ac98d39a711dcff0d8f22686916e1c2495144b";
+    hash = "sha256-8T1XhBSOiArlUQbQ41LsUogDgOurLhf+M8mjIrrAC4s=";
   };
 
   nativeBuildInputs = [
@@ -48,14 +48,12 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace 'PyYAML = "^5.4.0"' 'PyYAML = "*"'
-  '';
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
 
   disabledTestPaths = [
     # Test are not ported from hbmqtt yet
-    "tests/test_cli.py"
     "tests/test_client.py"
   ];
 
diff --git a/pkgs/development/python-modules/ansi2html/default.nix b/pkgs/development/python-modules/ansi2html/default.nix
index 1f45968974cb7..6489832c43a9c 100644
--- a/pkgs/development/python-modules/ansi2html/default.nix
+++ b/pkgs/development/python-modules/ansi2html/default.nix
@@ -2,14 +2,14 @@
 
 buildPythonPackage rec {
   pname = "ansi2html";
-  version = "1.7.0";
+  version = "1.8.0";
   format = "pyproject";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-aTFr6MaKyRxVgtOXwokOacmTzHzaUgYqx+Rfy2YNjtw=";
+    sha256 = "sha256-OLgqKYSCofomE/D5yb6z23Ko+DLurFjrLke/Ms039tU=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/ansible-doctor/default.nix b/pkgs/development/python-modules/ansible-doctor/default.nix
index b70521d3d79cc..67dc34f19b84f 100644
--- a/pkgs/development/python-modules/ansible-doctor/default.nix
+++ b/pkgs/development/python-modules/ansible-doctor/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "ansible-doctor";
-  version = "1.4.0";
+  version = "1.4.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -25,8 +25,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "thegeeklab";
     repo = "ansible-doctor";
-    rev = "v${version}";
-    hash = "sha256-onRur31Sa95nsXUYFJdAHySm4nIXqP01nT70IFPwLCo=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-kfBEV3PXU+C7FD9xiBMvdamb3b2KXp+Qi23/xUnoXHM=";
   };
 
   nativeBuildInputs = [
@@ -57,7 +57,8 @@ buildPythonPackage rec {
       --replace 'anyconfig = "0.13.0"' 'anyconfig = "*"' \
       --replace 'environs = "9.5.0"' 'environs = "*"' \
       --replace 'jsonschema = "4.6.0"' 'jsonschema = "*"' \
-      --replace '"ruamel.yaml" = "0.17.21"' '"ruamel.yaml" = "*"'
+      --replace '"ruamel.yaml" = "0.17.21"' '"ruamel.yaml" = "*"' \
+      --replace 'python-json-logger = "2.0.2"' 'python-json-logger = "*"'
   '';
 
   # Module has no tests
diff --git a/pkgs/development/python-modules/ansible-later/default.nix b/pkgs/development/python-modules/ansible-later/default.nix
index 5e7f717634a2e..9e0af254b3f9e 100644
--- a/pkgs/development/python-modules/ansible-later/default.nix
+++ b/pkgs/development/python-modules/ansible-later/default.nix
@@ -1,4 +1,6 @@
 { lib
+, ansible
+, ansible-core
 , anyconfig
 , appdirs
 , buildPythonPackage
@@ -21,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "ansible-later";
-  version = "2.0.14";
+  version = "2.0.16";
   format = "pyproject";
 
   disabled = pythonOlder "3.8";
@@ -30,14 +32,28 @@ buildPythonPackage rec {
     owner = "thegeeklab";
     repo = pname;
     rev = "refs/tags/v${version}";
-    hash = "sha256-iY+5p6LNrlCTGi61cm2DJdyt8SmAwYqKmXNXescjAVQ=";
+    hash = "sha256-AlLy8rqqNrJtoI01OHq8W1Oi8iN8RiBdtq2sZ7zlTyM=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace 'version = "0.0.0"' 'version = "${version}"' \
+      --replace " --cov=ansiblelater --cov-report=xml:coverage.xml --cov-report=term --cov-append --no-cov-on-fail" "" \
+      --replace 'PyYAML = "6.0"' 'PyYAML = "*"' \
+      --replace 'unidiff = "0.7.3"' 'unidiff = "*"' \
+      --replace 'jsonschema = "' 'jsonschema = "^' \
+      --replace 'python-json-logger = "' 'python-json-logger = "^' \
+      --replace 'toolz = "0.11.2' 'toolz = "*' \
+      --replace 'yamllint = "' 'yamllint = "^'
+  '';
+
   nativeBuildInputs = [
     poetry-core
   ];
 
   propagatedBuildInputs = [
+    ansible
+    ansible-core
     anyconfig
     appdirs
     colorama
@@ -57,15 +73,6 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace 'version = "0.0.0"' 'version = "${version}"' \
-      --replace " --cov=ansiblelater --cov-report=xml:coverage.xml --cov-report=term --cov-append --no-cov-on-fail" "" \
-      --replace 'PyYAML = "6.0"' 'PyYAML = "*"' \
-      --replace 'unidiff = "0.7.3"' 'unidiff = "*"' \
-      --replace 'jsonschema = "' 'jsonschema = "^'
-  '';
-
   postInstall = ''
     rm $out/lib/python*/site-packages/LICENSE
   '';
diff --git a/pkgs/development/python-modules/ansible-runner/default.nix b/pkgs/development/python-modules/ansible-runner/default.nix
index ded3205f47b6d..fcff683c1def4 100644
--- a/pkgs/development/python-modules/ansible-runner/default.nix
+++ b/pkgs/development/python-modules/ansible-runner/default.nix
@@ -19,12 +19,12 @@
 
 buildPythonPackage rec {
   pname = "ansible-runner";
-  version = "2.1.3";
+  version = "2.2.1";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-2m5dD+gGDL5LnY7QbDYiGdu4GYu0C49WU29GZY2bnBo=";
+    hash = "sha256-zZtssRdAEbTi4KWZPU0E2SjN5f4iqJk67UQ4STOHwYI=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/anyascii/default.nix b/pkgs/development/python-modules/anyascii/default.nix
index b03b59d339edf..b34a711f6a9ec 100644
--- a/pkgs/development/python-modules/anyascii/default.nix
+++ b/pkgs/development/python-modules/anyascii/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "anyascii";
-  version = "0.3.0";
+  version = "0.3.1";
   format = "setuptools";
   disabled = pythonOlder "3.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-JPJ0Mftkxsk6MxJftm+MugB6UmK8H6q+r+2l9LtwtZM=";
+    sha256 = "sha256-3t9XcoIG4obJHu18dZUFpeRcjNATZ91Awvcki7FcEfY=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/apache-airflow/default.nix b/pkgs/development/python-modules/apache-airflow/default.nix
index 9a3bb02a5c44d..d6257e537bd5a 100644
--- a/pkgs/development/python-modules/apache-airflow/default.nix
+++ b/pkgs/development/python-modules/apache-airflow/default.nix
@@ -65,13 +65,13 @@
 , mkYarnPackage
 }:
 let
-  version = "2.2.4";
+  version = "2.3.3";
 
   airflow-src = fetchFromGitHub rec {
     owner = "apache";
     repo = "airflow";
-    rev = version;
-    sha256 = "sha256-JCcEgCq1sB8lBaeJy7QQbWU00sGAh5vUmJAptF8M9qo=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-N+6ljfSo6+UvSAnvDav6G0S49JZ1VJwxmaiKPV3/DjA=";
   };
 
   # airflow bundles a web interface, which is built using webpack by an undocumented shell script in airflow's source tree.
diff --git a/pkgs/development/python-modules/apipkg/default.nix b/pkgs/development/python-modules/apipkg/default.nix
index 1b6528ab30098..3179f9be6f3ad 100644
--- a/pkgs/development/python-modules/apipkg/default.nix
+++ b/pkgs/development/python-modules/apipkg/default.nix
@@ -1,41 +1,47 @@
-{ lib, buildPythonPackage, fetchPypi
-, pytest, setuptools-scm, isPy3k }:
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, hatch-vcs
+, hatchling
+, pytestCheckHook
+}:
 
 buildPythonPackage rec {
   pname = "apipkg";
-  version = "2.1.1";
+  version = "3.0.1";
+  format = "pyproject";
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "sha256-zKNAIkFKE5duM6HjjWoJBWfve2jQNy+SPGmaj4wIivw=";
+  src = fetchFromGitHub {
+    owner = "pytest-dev";
+    repo = pname;
+    rev = "v${version}";
+    hash = "sha256-gf84SzfuKLGYfI88IzPRJCqMZWwowUR10FgIbwXjwuY=";
   };
 
-  nativeBuildInputs = [ setuptools-scm ];
-  checkInputs = [ pytest ];
-
-  # Fix pytest 4 support. See: https://github.com/pytest-dev/apipkg/issues/14
-  postPatch = ''
-    substituteInPlace "test_apipkg.py" \
-      --replace "py.test.ensuretemp('test_apipkg')" "py.path.local('test_apipkg')"
-  '';
-
-  # Failing tests on Python 3
-  # https://github.com/pytest-dev/apipkg/issues/17
-  checkPhase = let
-    disabledTests = lib.optionals isPy3k [
-      "test_error_loading_one_element"
-      "test_aliasmodule_proxy_methods"
-      "test_eagerload_on_bython"
-    ];
-    testExpression = lib.optionalString (disabledTests != [])
-    "-k 'not ${lib.concatStringsSep " and not " disabledTests}'";
-  in ''
-    py.test ${testExpression}
-  '';
+  SETUPTOOLS_SCM_PRETEND_VERSION = version;
+
+  nativeBuildInputs = [
+    hatch-vcs
+    hatchling
+  ];
+
+  checkInputs = [
+    pytestCheckHook
+  ];
+
+  pytestFlagsArray = [
+    "test_apipkg.py"
+  ];
+
+  pythonImportsCheck = [
+    "apipkg"
+  ];
 
   meta = with lib; {
+    changelog = "https://github.com/pytest-dev/apipkg/blob/main/CHANGELOG";
     description = "Namespace control and lazy-import mechanism";
     homepage = "https://github.com/pytest-dev/apipkg";
     license = licenses.mit;
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/development/python-modules/appnope/default.nix b/pkgs/development/python-modules/appnope/default.nix
index e4f1262a6c609..b83b1b54bb807 100644
--- a/pkgs/development/python-modules/appnope/default.nix
+++ b/pkgs/development/python-modules/appnope/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "appnope";
-  version = "0.1.2";
+  version = "0.1.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "dd83cd4b5b460958838f6eb3000c660b1f9caf2a5b1de4264e941512f603258a";
+    sha256 = "sha256-Ar2RxN6Gn7seHFCq/ECYgnp6VKsvOdncumyVR+2SDiQ=";
   };
 
   meta = {
diff --git a/pkgs/development/python-modules/apsw/default.nix b/pkgs/development/python-modules/apsw/default.nix
index dda3fe6a6836e..e4b4a94bf832d 100644
--- a/pkgs/development/python-modules/apsw/default.nix
+++ b/pkgs/development/python-modules/apsw/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "apsw";
-  version = "3.38.1-r1";
+  version = "3.38.5-r1";
   format = "setuptools";
 
   disabled = isPyPy;
@@ -17,8 +17,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "rogerbinns";
     repo = "apsw";
-    rev = version;
-    hash = "sha256-pbb6wCu1T1mPlgoydB1Y1AKv+kToGkdVUjiom2vTqf4=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-pPviSrONGgWZUREMENPt34bpHggR00Kl6DrB40JWm+w=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/astroid/default.nix b/pkgs/development/python-modules/astroid/default.nix
index dc28b10d7b9dd..6cde2e7550307 100644
--- a/pkgs/development/python-modules/astroid/default.nix
+++ b/pkgs/development/python-modules/astroid/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "astroid";
-  version = "2.11.5"; # Check whether the version is compatible with pylint
+  version = "2.11.7"; # Check whether the version is compatible with pylint
 
   disabled = pythonOlder "3.6.2";
 
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "PyCQA";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-GKda3hNdOrsd11pi+6NpYodW4TAgSvqbv2hF4GaIvtM=";
+    sha256 = "sha256-HpniGxKf+daMh/sxP9T9UriYRrUFWqk7kDa8r+EqtVI=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
diff --git a/pkgs/development/python-modules/astropy/default.nix b/pkgs/development/python-modules/astropy/default.nix
index 56d0cc766ad01..fbf40096daef3 100644
--- a/pkgs/development/python-modules/astropy/default.nix
+++ b/pkgs/development/python-modules/astropy/default.nix
@@ -19,7 +19,7 @@
 
 let
   pname = "astropy";
-  version = "5.0.3";
+  version = "5.1";
 in
 buildPythonPackage {
   inherit pname version;
@@ -29,7 +29,7 @@ buildPythonPackage {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-GxZOxV63HH8Pil8zVDOcWkLWEpg1ayFOT7n/JWqGgUc=";
+    sha256 = "sha256-HbGyx+3fx3PKZvozvQeyXVucO17uK5NODKJ3+lsbe34=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
diff --git a/pkgs/development/python-modules/async-upnp-client/default.nix b/pkgs/development/python-modules/async-upnp-client/default.nix
index 7e6d0bc3fb754..ce8572566e3e4 100644
--- a/pkgs/development/python-modules/async-upnp-client/default.nix
+++ b/pkgs/development/python-modules/async-upnp-client/default.nix
@@ -61,6 +61,11 @@ buildPythonPackage rec {
     "test_deferred_callback_url"
   ];
 
+  disabledTestPaths = [
+    # Tries to bind to multicast socket and fails to find proper interface
+    "tests/test_ssdp_listener.py"
+  ];
+
   pythonImportsCheck = [
     "async_upnp_client"
   ];
diff --git a/pkgs/development/python-modules/asyncpg/default.nix b/pkgs/development/python-modules/asyncpg/default.nix
index 7d28810380f05..0a3ef8f119e04 100644
--- a/pkgs/development/python-modules/asyncpg/default.nix
+++ b/pkgs/development/python-modules/asyncpg/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "asyncpg";
-  version = "0.25.0";
+  version = "0.26.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Y/jmppczsoVJfChVRko03mV/LMzSWurutQcYcuk4JUA=";
+    hash = "sha256-d+aEok/uF7o+SHypgtAlntF7rhr2gAb0zyhLI7og6iw=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/atenpdu/default.nix b/pkgs/development/python-modules/atenpdu/default.nix
index 4eed27b3cfd5f..d2f4cc0af8ce0 100644
--- a/pkgs/development/python-modules/atenpdu/default.nix
+++ b/pkgs/development/python-modules/atenpdu/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "atenpdu";
-  version = "0.3.3";
+  version = "0.3.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-/duY1hS+RU/UAdcQoHF1+c99XaN74jj/0Hj/86U0kmo=";
+    sha256 = "sha256-vvq8InmJUgvm/PpvZutpsBR3Fj1gR+xrkgfEGlw04Ek=";
   };
 
   propagatedBuildInputs = [ pysnmp ];
diff --git a/pkgs/development/python-modules/atomicwrites/default.nix b/pkgs/development/python-modules/atomicwrites/default.nix
index 5335c044cd278..dbf094d54bc04 100644
--- a/pkgs/development/python-modules/atomicwrites/default.nix
+++ b/pkgs/development/python-modules/atomicwrites/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "atomicwrites";
-  version = "1.4.0";
+  version = "1.4.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "ae70396ad1a434f9c7046fd2dd196fc04b12f9e91ffb859164193be8b6168a7a";
+    sha256 = "sha256-gbLJBxpJNnp/dwFw5e7Iy2ZWfPu8jHPSDOXKSo1xzxE=";
   };
 
   # Tests depend on pytest but atomicwrites is a dependency of pytest
diff --git a/pkgs/development/python-modules/auth0-python/default.nix b/pkgs/development/python-modules/auth0-python/default.nix
index c6886dc8bed7b..7aa062be6c957 100644
--- a/pkgs/development/python-modules/auth0-python/default.nix
+++ b/pkgs/development/python-modules/auth0-python/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "auth0-python";
-  version = "3.22.0";
+  version = "3.23.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-05yJbF6eXz+vJx+plY5gqzRRYL2SjDnF7gSfX6WIS4E=";
+    sha256 = "sha256-sXEWg6zrwMs8pCSloJtLL3o7ZAXTTiMXEgI7sDaogr4=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/authlib/default.nix b/pkgs/development/python-modules/authlib/default.nix
index c55a6e412730b..c023c8d6920f0 100644
--- a/pkgs/development/python-modules/authlib/default.nix
+++ b/pkgs/development/python-modules/authlib/default.nix
@@ -8,14 +8,14 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.15.5";
+  version = "1.0.1";
   pname = "authlib";
 
   src = fetchFromGitHub {
     owner = "lepture";
     repo = "authlib";
-    rev = "v${version}";
-    sha256 = "1893mkzrlfxpxrgv10y134y8c3ni5hb0qvb0wsc76d2k4mci5j3n";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-2uzb3rhEDMgH2QZ0yUdI1c4qLJT5XIDmOV/1mV/5lnc=";
   };
 
   propagatedBuildInputs = [ cryptography requests ];
diff --git a/pkgs/development/python-modules/autobahn/default.nix b/pkgs/development/python-modules/autobahn/default.nix
index 10925ebac25e3..57e09385f8a6f 100644
--- a/pkgs/development/python-modules/autobahn/default.nix
+++ b/pkgs/development/python-modules/autobahn/default.nix
@@ -48,14 +48,14 @@
 
 buildPythonPackage rec {
   pname = "autobahn";
-  version = "22.5.1";
+  version = "22.6.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-NKpVabC0QZ+MJ3eSxgDcJRjEkwkox04iee+LiNi4o+o=";
+    sha256 = "sha256-+2PpRtXC3Q32gIUehOZWJKSUzofJmfKklE5PLYG/RJg=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/awkward/default.nix b/pkgs/development/python-modules/awkward/default.nix
index 9698b445eb873..773e62901d285 100644
--- a/pkgs/development/python-modules/awkward/default.nix
+++ b/pkgs/development/python-modules/awkward/default.nix
@@ -25,7 +25,12 @@ buildPythonPackage rec {
   dontUseCmakeConfigure = true;
 
   checkInputs = [ pytestCheckHook numba ];
-  dontUseSetuptoolsCheck = true;
+
+  disabledTests = [
+    # incomatible with numpy 1.23
+    "test_numpyarray"
+  ];
+
   disabledTestPaths = [ "tests-cuda" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/aws-sam-translator/default.nix b/pkgs/development/python-modules/aws-sam-translator/default.nix
index 1f0a38584d5af..edd0e9426506c 100644
--- a/pkgs/development/python-modules/aws-sam-translator/default.nix
+++ b/pkgs/development/python-modules/aws-sam-translator/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "aws-sam-translator";
-  version = "1.46.0";
+  version = "1.47.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -22,8 +22,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "aws";
     repo = "serverless-application-model";
-    rev = "v${version}";
-    sha256 = "sha256-SLGxpRbTuK+Lxww45dfHIMwwxV5vhlnYyG4WqG45aNg=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-FYEJ+mMxb8+OXUVeyLbAqOnujNi/wNhvAl4Lh4ZeE0I=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/aws-xray-sdk/default.nix b/pkgs/development/python-modules/aws-xray-sdk/default.nix
index 7a9722be28ce1..fd8ed21cd085a 100644
--- a/pkgs/development/python-modules/aws-xray-sdk/default.nix
+++ b/pkgs/development/python-modules/aws-xray-sdk/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "aws-xray-sdk";
-  version = "2.9.0";
+  version = "2.10.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b0cd972db218d4d8f7b53ad806fc6184626b924c4997ae58fc9f2a8cd1281568";
+    sha256 = "sha256-mxSST9BijPkpNgVYZGVTVAA/CxrMPhw//eZAPQeZ3Xo=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/awscrt/default.nix b/pkgs/development/python-modules/awscrt/default.nix
index 13d57c6f85e84..ef179d27f0bd2 100644
--- a/pkgs/development/python-modules/awscrt/default.nix
+++ b/pkgs/development/python-modules/awscrt/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "awscrt";
-  version = "0.13.13";
+  version = "0.13.14";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-4kCn5tydt56L22UvWQvhLcLVr31UH+oMfdjhtL9U/eI=";
+    hash = "sha256-K2x0Up3H6kIWcYeWvVegd1CkTjq8RoM0AOm0SX5u6wQ=";
   };
 
   buildInputs = lib.optionals stdenv.isDarwin [
diff --git a/pkgs/development/python-modules/azure-core/default.nix b/pkgs/development/python-modules/azure-core/default.nix
index bae168e26dd42..81a5f3432919d 100644
--- a/pkgs/development/python-modules/azure-core/default.nix
+++ b/pkgs/development/python-modules/azure-core/default.nix
@@ -83,6 +83,8 @@ buildPythonPackage rec {
     "tests/test_streaming.py"
     # testserver tests require being in a very specific working directory to make it work
     "tests/testserver_tests/"
+    # requires missing pytest plugin
+    "tests/async_tests/test_rest_asyncio_transport.py"
   ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/azure-mgmt-appconfiguration/default.nix b/pkgs/development/python-modules/azure-mgmt-appconfiguration/default.nix
index 45147a94b2aba..650b54c9dd151 100644
--- a/pkgs/development/python-modules/azure-mgmt-appconfiguration/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-appconfiguration/default.nix
@@ -6,13 +6,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "2.0.0";
+  version = "2.1.0";
   pname = "azure-mgmt-appconfiguration";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "97e990ec6a5a3acafc7fc1add8ff1a160ebb2052792931352fd7cf1d90f1f956";
+    sha256 = "sha256-6s3KfWOlzkoq7uxuDbFMYmW22rOYHtgQgYQ6RMFQiQ8=";
     extension = "zip";
   };
 
diff --git a/pkgs/development/python-modules/azure-mgmt-compute/default.nix b/pkgs/development/python-modules/azure-mgmt-compute/default.nix
index 400ed795aeaf9..6c0f36d92eeec 100644
--- a/pkgs/development/python-modules/azure-mgmt-compute/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-compute/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-compute";
-  version = "27.1.0";
+  version = "27.2.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -16,7 +16,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    hash = "sha256-ixTWYs1hecmvuXrMbW1hXFsH9/nd7HjPUMSl3seXy7E=";
+    hash = "sha256-5caVUxZvt+7L/1LDfcD/SiUwvFVF1KXdS6mDIVrSKJ0=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-mgmt-consumption/default.nix b/pkgs/development/python-modules/azure-mgmt-consumption/default.nix
index aa9d27e680ef1..0f8adb56ad348 100644
--- a/pkgs/development/python-modules/azure-mgmt-consumption/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-consumption/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-consumption";
-  version = "9.0.0";
+  version = "10.0.0";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "76f9566390721226add96c9d3020ab986d3e5fd81e3143c098f57262c6ce4a51";
+    sha256 = "sha256-BqCGQ2wXN/d6uGiU1R9Zc7bg+l7fVlWOTCllieurkTA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-mgmt-core/default.nix b/pkgs/development/python-modules/azure-mgmt-core/default.nix
index 0a65dbfb7ec82..2a4b00432f190 100644
--- a/pkgs/development/python-modules/azure-mgmt-core/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-core/default.nix
@@ -6,13 +6,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.3.0";
+  version = "1.3.1";
   pname = "azure-mgmt-core";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "3ffb7352b39e5495dccc2d2b47254f4d82747aff4735e8bf3267c335b0c9bb40";
+    sha256 = "sha256-yJ6/GMInvJih7sypVGC4p+IwWQ1FbI+pwtWs3GcPeAg=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-mgmt-datafactory/default.nix b/pkgs/development/python-modules/azure-mgmt-datafactory/default.nix
index 9f05ce07d78ec..c6907efc99773 100644
--- a/pkgs/development/python-modules/azure-mgmt-datafactory/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-datafactory/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-datafactory";
-  version = "2.6.0";
+  version = "2.7.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    hash = "sha256-mvZw+GOnOuDNDb4k8PY38IHBvSekYCDdIGUcGCJwWss=";
+    hash = "sha256-g7av5MFy4QNg+81PqDGznHXUZsHhnaauaJV/B6GMy4A=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-mgmt-extendedlocation/default.nix b/pkgs/development/python-modules/azure-mgmt-extendedlocation/default.nix
index 40e5cbab3bf25..32e4bc0ebb758 100644
--- a/pkgs/development/python-modules/azure-mgmt-extendedlocation/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-extendedlocation/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-extendedlocation";
-  version = "1.0.0";
+  version = "1.1.0";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "e2388407dc27b93dec3314bfa64210d3514b98a4f961c410321fb4292b9b3e9a";
+    sha256 = "sha256-jRo6EFP8Dg3i9U8HLfjED9QFfWbdg+X3o9PSf4eus9o=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-mgmt-imagebuilder/default.nix b/pkgs/development/python-modules/azure-mgmt-imagebuilder/default.nix
index 005f5ca8f0c09..b00b496943283 100644
--- a/pkgs/development/python-modules/azure-mgmt-imagebuilder/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-imagebuilder/default.nix
@@ -6,13 +6,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.0.0";
+  version = "1.1.0";
   pname = "azure-mgmt-imagebuilder";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "634e398de9a23e712aa27a4a59f9ea5d5091d1dfcfed5ac977230918872c4430";
+    sha256 = "sha256-2EWfTsl5y3Sw4P8d5X7TKxYmO4PagUTNv/SFKdjY2Ss=";
     extension = "zip";
   };
 
diff --git a/pkgs/development/python-modules/azure-mgmt-media/default.nix b/pkgs/development/python-modules/azure-mgmt-media/default.nix
index eb1bed0b547d0..57ccffcf997f5 100644
--- a/pkgs/development/python-modules/azure-mgmt-media/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-media/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-media";
-  version = "9.0.0";
+  version = "10.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    hash = "sha256-TI7l8sSQ2QUgPqiE3Cu/F67Wna+KHbQS3fuIjOb95ZM=";
+    hash = "sha256-KKUeibEAUqKsjjjqpzYBFaQUGniY3rbe+lfCnL0+lpY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-mgmt-msi/default.nix b/pkgs/development/python-modules/azure-mgmt-msi/default.nix
index d36a1b985c716..45a57d1c68a08 100644
--- a/pkgs/development/python-modules/azure-mgmt-msi/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-msi/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-msi";
-  version = "6.0.1";
+  version = "6.1.0";
 
   disabled = pythonOlder "3.6";
 
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "sha256-PPkQmUoBkJ8Su7h9G2/t8dVy/PT3uCYZjlf70fnY2vU=";
+    sha256 = "sha256-lS8da3Al1z1pMLDBf6ZtWc1UFUVgkN1qpKTxt4VXdlQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-mgmt-web/default.nix b/pkgs/development/python-modules/azure-mgmt-web/default.nix
index cd19e88e9bd05..ddaa89d916eb7 100644
--- a/pkgs/development/python-modules/azure-mgmt-web/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-web/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-web";
-  version = "6.1.0";
+  version = "7.0.0";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "c26635089276515b0488fcf014aab50a0446f54800c6e0e5583cc493ac8d738f";
+    sha256 = "sha256-WvyNgfiliEt6qawqy8Le8eifhxusMkoZbf6YcyY1SBA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/b2sdk/default.nix b/pkgs/development/python-modules/b2sdk/default.nix
index 2adc8b784f10f..5c3c8c8c682c1 100644
--- a/pkgs/development/python-modules/b2sdk/default.nix
+++ b/pkgs/development/python-modules/b2sdk/default.nix
@@ -4,6 +4,7 @@
 , fetchPypi
 , importlib-metadata
 , logfury
+, pyfakefs
 , pytestCheckHook
 , pytest-lazy-fixture
 , pytest-mock
@@ -15,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "b2sdk";
-  version = "1.14.1";
+  version = "1.17.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-fYOeyhKm9mRT61NcQVaXFKeRC8AS9lfIZMO/s6iFaeg=";
+    hash = "sha256-pyPjjdQ8wzvQitlchGlfNTPwqs0PH6xgplSPUWpjtwM=";
   };
 
   nativeBuildInputs = [
@@ -42,6 +43,7 @@ buildPythonPackage rec {
     pytestCheckHook
     pytest-lazy-fixture
     pytest-mock
+    pyfakefs
   ];
 
   postPatch = ''
@@ -51,6 +53,11 @@ buildPythonPackage rec {
       --replace 'arrow>=0.8.0,<1.0.0' 'arrow'
   '';
 
+  disabledTestPaths = [
+    # requires aws s3 auth
+    "test/integration/test_download.py"
+  ];
+
   disabledTests = [
     # Test requires an API key
     "test_raw_api"
diff --git a/pkgs/development/python-modules/backoff/default.nix b/pkgs/development/python-modules/backoff/default.nix
index c7d1d5373fb16..9671b7b5a2671 100644
--- a/pkgs/development/python-modules/backoff/default.nix
+++ b/pkgs/development/python-modules/backoff/default.nix
@@ -1,21 +1,21 @@
-{ lib, buildPythonPackage, fetchFromGitHub, pytestCheckHook, poetry, pytest-asyncio, }:
+{ lib, buildPythonPackage, fetchFromGitHub, pytestCheckHook, poetry, pytest-asyncio, responses }:
 
 buildPythonPackage rec {
   pname = "backoff";
-  version = "1.11.1";
+  version = "2.1.2";
 
   src = fetchFromGitHub {
     owner = "litl";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-87IMcLaoCn0Vns8Ub/AFmv0gXtS0aPZX0cSt7+lOPm4=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-eKd1g3UxXlpSlNlik80RKXRaw4mZyvAWl3i2GNuZ3hI=";
   };
 
   format = "pyproject";
 
   nativeBuildInputs = [ poetry ];
 
-  checkInputs = [ pytestCheckHook pytest-asyncio ];
+  checkInputs = [ pytestCheckHook pytest-asyncio responses ];
 
   meta = with lib; {
     description = "Function decoration for backoff and retry";
diff --git a/pkgs/development/python-modules/basemap-data/default.nix b/pkgs/development/python-modules/basemap-data/default.nix
new file mode 100644
index 0000000000000..ebdbbe4d15949
--- /dev/null
+++ b/pkgs/development/python-modules/basemap-data/default.nix
@@ -0,0 +1,33 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, pythonAtLeast
+, basemap
+, cython
+, geos
+, numpy
+, matplotlib
+, pyproj
+, pyshp
+, python
+, setuptools
+}:
+
+buildPythonPackage rec {
+  pname = "basemap-data";
+  inherit (basemap) version src;
+
+  sourceRoot = "source/packages/basemap_data";
+
+  # no tests
+  doCheck = false;
+
+  pythonImportsCheck =  [ "mpl_toolkits.basemap_data" ];
+
+  meta = with lib; {
+    homepage = "https://matplotlib.org/basemap/";
+    description = "Data assets for matplotlib basemap";
+    license = with licenses; [ mit lgpl3Plus ];
+    maintainers = with maintainers; [ ];
+  };
+}
diff --git a/pkgs/development/python-modules/basemap/default.nix b/pkgs/development/python-modules/basemap/default.nix
index 6d8dd8a3943b0..b0a1aac746fff 100644
--- a/pkgs/development/python-modules/basemap/default.nix
+++ b/pkgs/development/python-modules/basemap/default.nix
@@ -2,39 +2,66 @@
 , buildPythonPackage
 , fetchFromGitHub
 , pythonAtLeast
+, basemap-data
+, cython
+, geos
 , numpy
 , matplotlib
 , pillow
-, setuptools
 , pyproj
 , pyshp
-, six
-, pkgs
+, python
+, setuptools
 }:
 
 buildPythonPackage rec {
   pname = "basemap";
-  version = "1.3.2";
+  version = "1.3.3";
 
   src = fetchFromGitHub {
     owner = "matplotlib";
     repo = "basemap";
-    rev = "v${version}";
-    sha256 = "sha256-onNdOQL4i6GTcuCRel5yanJ2EQ5iYClp+imuBObXF2I=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-ObRQ5GsYx3k7fLaaK5Z4Td54rW/Nnx5+2zm8KLCIZl8=";
   };
 
-  propagatedBuildInputs = [ numpy matplotlib pillow pyproj pyshp six ];
-  buildInputs = [ setuptools pkgs.geos ];
+  sourceRoot = "source/packages/basemap";
+
+  postPatch = ''
+    substituteInPlace requirements.txt \
+      --replace "numpy >= 1.21, < 1.23" "numpy >= 1.21, < 1.24" \
+      --replace "pyshp >= 1.2, < 2.2" "pyshp >= 1.2, < 2.4"
+  '';
+
+  nativeBuildInputs = [
+    cython
+    geos
+    setuptools
+  ];
+
+  propagatedBuildInputs = [
+    basemap-data
+    numpy
+    matplotlib
+    pillow # undocumented optional dependency
+    pyproj
+    pyshp
+  ];
 
   # Standard configurePhase from `buildPythonPackage` seems to break the setup.py script
-  configurePhase = ''
-    export GEOS_DIR=${pkgs.geos}
+  preBuild = ''
+    export GEOS_DIR=${geos}
   '';
 
-  # The 'check' target is not supported by the `setup.py` script.
-  # TODO : do the post install checks (`cd examples && ${python.interpreter} run_all.py`)
+  # test have various problems including requiring internet connection, permissions issues, problems with latest version of pillow
   doCheck = false;
 
+  checkPhase = ''
+    cd ../../examples
+    export HOME=$TEMPDIR
+    ${python.interpreter} run_all.py
+  '';
+
   meta = with lib; {
     homepage = "https://matplotlib.org/basemap/";
     description = "Plot data on map projections with matplotlib";
@@ -43,8 +70,7 @@ buildPythonPackage rec {
       coastlines, lakes, rivers and political boundaries. See
       http://matplotlib.github.com/basemap/users/examples.html for examples of what it can do.
     '';
-    license = with licenses; [ mit gpl2 ];
-    broken = pythonAtLeast "3.9";
+    maintainers = with maintainers; [ ];
+    license = with licenses; [ mit lgpl21 ];
   };
-
 }
diff --git a/pkgs/development/python-modules/bcrypt/default.nix b/pkgs/development/python-modules/bcrypt/default.nix
index 13fb25d037146..592b5b22d47d3 100644
--- a/pkgs/development/python-modules/bcrypt/default.nix
+++ b/pkgs/development/python-modules/bcrypt/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "bcrypt";
-  version = "3.2.0";
+  version = "3.2.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5b93c1726e50a93a033c36e5ca7fdcd29a5c7395af50a6892f5d9e7c6cfbfb29";
+    sha256 = "sha256-QzxBDCF3BXcF2iqfLNAd0VdJOyp6wUyFk6FrPatra/s=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/bibtexparser/default.nix b/pkgs/development/python-modules/bibtexparser/default.nix
index 2c24578f45815..d8bfe8e9a6686 100644
--- a/pkgs/development/python-modules/bibtexparser/default.nix
+++ b/pkgs/development/python-modules/bibtexparser/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "bibtexparser";
-  version = "1.2.0";
+  version = "1.3.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -17,8 +17,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "sciunto-org";
     repo = "python-${pname}";
-    rev = "v${version}";
-    hash = "sha256-M9fDI28Yq0uUHPx51wiuRPmRTLkjVqj7ixapbSftnJc=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-Z+opmknmgyFwvKJyvrv3MMpo23etZCn4bxGTpG5d/dY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/bids-validator/default.nix b/pkgs/development/python-modules/bids-validator/default.nix
index 05dd93ffa032f..88a0a4adea42a 100644
--- a/pkgs/development/python-modules/bids-validator/default.nix
+++ b/pkgs/development/python-modules/bids-validator/default.nix
@@ -4,12 +4,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.9.3";
+  version = "1.9.5";
   pname = "bids-validator";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ATJi4eCWV0i3Z8AsgV/DtiCn8Qzi2cMDtId5jXCoDL0=";
+    sha256 = "sha256-izjda65OYnwaPX30JqdCL5fFh5IW5eJeAIrP4l9I3kE=";
   };
 
   # needs packages which are not available in nixpkgs
diff --git a/pkgs/development/python-modules/biliass/default.nix b/pkgs/development/python-modules/biliass/default.nix
index fe2cd731a1ce2..617b87bc12f16 100644
--- a/pkgs/development/python-modules/biliass/default.nix
+++ b/pkgs/development/python-modules/biliass/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "biliass";
-  version = "1.3.4";
+  version = "1.3.5";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-kktK+6rLwYhkG7LiTBlgBbiIN8apweg4l8pJSTjKQU4=";
+    sha256 = "sha256-kgoQUX2l5YENEozcnfluwvcAO1ZSxlfHPVIa9ABW6IU=";
   };
 
   propagatedBuildInputs = [ protobuf ];
diff --git a/pkgs/development/python-modules/billiard/default.nix b/pkgs/development/python-modules/billiard/default.nix
index a2aaa1027c5d4..303d334936c67 100644
--- a/pkgs/development/python-modules/billiard/default.nix
+++ b/pkgs/development/python-modules/billiard/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "billiard";
-  version = "3.6.4.0";
+  version = "4.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0ismj2p8c66ykpss94rs0bfra5agxxmljz8r3gaq79r8valfb799";
+    sha256 = "sha256-NE2aHX063fFx6yxZbJ6Y0e/4Gw4D8fk5iTmjUYyiY6k=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/bimmer-connected/default.nix b/pkgs/development/python-modules/bimmer-connected/default.nix
index 5f494308ecf9f..a9ca9833a55f6 100644
--- a/pkgs/development/python-modules/bimmer-connected/default.nix
+++ b/pkgs/development/python-modules/bimmer-connected/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "bimmer-connected";
-  version = "0.10.0";
+  version = "0.10.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "bimmerconnected";
     repo = "bimmer_connected";
     rev = "refs/tags/${version}";
-    hash = "sha256-R7QmxSUbVsvb+MRTYlihxuM05WLYASRSfUs09fl7l1k=";
+    hash = "sha256-RgF9uQREFOLvAUtoXixywSfQExu6W3qw0JCqVw9Nl9w=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/bip_utils/default.nix b/pkgs/development/python-modules/bip_utils/default.nix
index 932d887754ec4..737dad3550cc5 100644
--- a/pkgs/development/python-modules/bip_utils/default.nix
+++ b/pkgs/development/python-modules/bip_utils/default.nix
@@ -8,15 +8,15 @@
 
 buildPythonPackage rec {
   pname = "bip_utils";
-  version = "2.2.1";
+  version = "2.5.1";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "ebellocchia";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-p2JOZAJxQ/nPZ7vjnB24hA3kz3Io4D3HTP/8mqS/XCc=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-lH8hd+JA1FhGH60MYIIuwHjr/4wFbYeuw/hd60kr1xc=";
   };
 
   propagatedBuildInputs = [ ecdsa pysha3 ];
diff --git a/pkgs/development/python-modules/bitstruct/default.nix b/pkgs/development/python-modules/bitstruct/default.nix
index 5867e695b816e..4602e650b7f32 100644
--- a/pkgs/development/python-modules/bitstruct/default.nix
+++ b/pkgs/development/python-modules/bitstruct/default.nix
@@ -6,14 +6,14 @@
 
 buildPythonPackage rec {
   pname = "bitstruct";
-  version = "8.14.1";
+  version = "8.15.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-04ExvUR7avW49GTEh4eXyHpdnaHJW5NX4HHEJP3l8FU=";
+    hash = "sha256-b6atv7jzuMtowhsTqmXSPrLDrDJBmrkm8/0f/3F6kSU=";
   };
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/bleach/default.nix b/pkgs/development/python-modules/bleach/default.nix
index fce105163a54f..06cefc9bbb0d9 100644
--- a/pkgs/development/python-modules/bleach/default.nix
+++ b/pkgs/development/python-modules/bleach/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "bleach";
-  version = "5.0.0";
+  version = "5.0.1";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-xtbMBUvcnIO0i4CD4jbl8A8jhChmbSzi4IPqpf1WhWU=";
+    hash = "sha256-DQMlXEfrm9Lyaqm7fyEHcy5+j+GVyi9kcJ/POwpKCFw=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/blebox-uniapi/default.nix b/pkgs/development/python-modules/blebox-uniapi/default.nix
index 6d7c79bf6a0a7..5f695e0922e49 100644
--- a/pkgs/development/python-modules/blebox-uniapi/default.nix
+++ b/pkgs/development/python-modules/blebox-uniapi/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "blebox-uniapi";
-  version = "1.3.3";
+  version = "2.0.2";
 
   src = fetchFromGitHub {
     owner = "blebox";
     repo = "blebox_uniapi";
-    rev = "v${version}";
-    sha256 = "0qvv2697yhqjmgvh37h8wgz3a77n61kqmxvsk4pf47wn43hks15c";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-0Yiooy7YSUFjqqcyH2fPQ6AWuR0EJxfRRZTw/6JGcMA=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/blinker/default.nix b/pkgs/development/python-modules/blinker/default.nix
index 53aaacbdf820a..ceb6413da31cf 100644
--- a/pkgs/development/python-modules/blinker/default.nix
+++ b/pkgs/development/python-modules/blinker/default.nix
@@ -1,19 +1,19 @@
-{ lib, buildPythonPackage, fetchPypi, nose }:
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pytestCheckHook
+}:
 
 buildPythonPackage rec {
   pname = "blinker";
-  version = "1.4";
+  version = "1.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1dpq0vb01p36jjwbhhd08ylvrnyvcc82yxx3mwjx6awrycjyw6j7";
+    sha256 = "sha256-kj5eL2nBVfLMQtr7vXDhbj/eJNLUqiq3L744YjiJJGI=";
   };
 
-  checkInputs = [ nose ];
-
-  checkPhase = ''
-    nosetests
-  '';
+  checkInputs = [ pytestCheckHook ];
 
   pythonImportsCheck = [ "blinker" ];
 
diff --git a/pkgs/development/python-modules/blis/default.nix b/pkgs/development/python-modules/blis/default.nix
index be41b2acb87c1..290e1928414fb 100644
--- a/pkgs/development/python-modules/blis/default.nix
+++ b/pkgs/development/python-modules/blis/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "blis";
-  version = "0.7.7";
+  version = "0.9.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-XUqB+UONt6GayOZK1BMx9lplnqjzuxiJqcIIjP2f4QQ=";
+    sha256 = "sha256-aZ4coUlnFjcLS5tSfFjYQr+JKGPY2UTNoy+HIO08tCk=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/bokeh/default.nix b/pkgs/development/python-modules/bokeh/default.nix
index 9017cbed0d6d8..75ca944830f18 100644
--- a/pkgs/development/python-modules/bokeh/default.nix
+++ b/pkgs/development/python-modules/bokeh/default.nix
@@ -33,11 +33,11 @@
 buildPythonPackage rec {
   pname = "bokeh";
   # update together with panel which is not straightforward
-  version = "2.4.2";
+  version = "2.4.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f0a4b53364ed3b7eb936c5cb1a4f4132369e394c7ae0a8ef420459410958033d";
+    sha256 = "sha256-7zOAEWGvN5Zlq3o0aE8iCYYeOu/VyAOiH7u5nZSHSwM=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/boltztrap2/default.nix b/pkgs/development/python-modules/boltztrap2/default.nix
index ad28d461faffa..ae467123e9bc7 100644
--- a/pkgs/development/python-modules/boltztrap2/default.nix
+++ b/pkgs/development/python-modules/boltztrap2/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "boltztrap2";
-  version = "22.4.1";
+  version = "22.6.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.5";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "BoltzTraP2";
     inherit version;
-    hash = "sha256-lGwKHWAslCmb9bVQELHD6kAay+dnieiNsSAfAyNFLPM=";
+    hash = "sha256-zEKRsNg5P+KKQCeB49TiiSXRmusvr1zwssHhppZdkfA=";
   };
 
   dontUseCmakeConfigure = true;
diff --git a/pkgs/development/python-modules/boto3/default.nix b/pkgs/development/python-modules/boto3/default.nix
index d849d49b64f85..67ac93a7dcd2c 100644
--- a/pkgs/development/python-modules/boto3/default.nix
+++ b/pkgs/development/python-modules/boto3/default.nix
@@ -13,11 +13,11 @@
 
 buildPythonPackage rec {
   pname = "boto3";
-  version = "1.21.30"; # N.B: if you change this, change botocore and awscli to a matching version
+  version = "1.24.31"; # N.B: if you change this, change botocore and awscli to a matching version
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-8K+PTvX+Y1PHlM08zmJ9Rpphi1is58p1pjz9cZ32Fc4=";
+    sha256 = "sha256-3gZzRpQsbRcwtRN4M4ViBRm4spNfWw7i5m1WX/tXzhI=";
   };
 
   propagatedBuildInputs = [ botocore jmespath s3transfer ] ++ lib.optionals (!isPy3k) [ futures ];
diff --git a/pkgs/development/python-modules/botocore/default.nix b/pkgs/development/python-modules/botocore/default.nix
index 6774189043c96..fa5c26d115c7e 100644
--- a/pkgs/development/python-modules/botocore/default.nix
+++ b/pkgs/development/python-modules/botocore/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "botocore";
-  version = "1.24.33"; # N.B: if you change this, change boto3 and awscli to a matching version
+  version = "1.27.31"; # N.B: if you change this, change boto3 and awscli to a matching version
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-6l/RgAggMKbDP6Gb8BHXKXDz7SPP/xtBQTBp4yV2gQM=";
+    sha256 = "sha256-sMx5+1o3oOK2vv6G79AnuSEB2Bnx/cVs//OfLrI58jI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/branca/default.nix b/pkgs/development/python-modules/branca/default.nix
index 4251c88058cda..e82c5ce783795 100644
--- a/pkgs/development/python-modules/branca/default.nix
+++ b/pkgs/development/python-modules/branca/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "branca";
-  version = "0.4.2";
+  version = "0.5.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c111453617b17ab2bda60a4cd71787d6f2b59c85cdf71ab160a737606ac66c31";
+    sha256 = "sha256-5vL366fdNozu+PY4Irhn9eEdTTq90Jmnh9ue0rcGWuE=";
   };
 
   checkInputs = [ pytest selenium ];
diff --git a/pkgs/development/python-modules/carbon/default.nix b/pkgs/development/python-modules/carbon/default.nix
index b30df5ec5383f..a15d2a5f11b97 100644
--- a/pkgs/development/python-modules/carbon/default.nix
+++ b/pkgs/development/python-modules/carbon/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "carbon";
-  version = "1.1.8";
+  version = "1.1.10";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "95918c4b14e1c525d9499554d5e03b349f87e0c2bc17ec5c64d18679a30b69f1";
+    sha256 = "sha256-wTtbqRHMWBcM2iFN95yzwCf/BQ+EK0vp5MXT4mKX3lw=";
   };
 
   # Carbon-s default installation is /opt/graphite. This env variable ensures
diff --git a/pkgs/development/python-modules/catalogue/default.nix b/pkgs/development/python-modules/catalogue/default.nix
index e47e77b9eb49b..ecdd74f9d37b6 100644
--- a/pkgs/development/python-modules/catalogue/default.nix
+++ b/pkgs/development/python-modules/catalogue/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "catalogue";
-  version = "2.0.7";
+  version = "2.1.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-U10zrnnr0hyimFUdhdoYaui44d82sPsCRtp3QWPsLWs=";
+    sha256 = "sha256-oczi8XOKMd6yqiSz5Kieb7PoUlVcGDsOzaiivMHq7y4=";
   };
 
   propagatedBuildInputs = lib.optionals (pythonOlder "3.8") [
diff --git a/pkgs/development/python-modules/cattrs/default.nix b/pkgs/development/python-modules/cattrs/default.nix
index 69a351e3c341c..837b01c868c31 100644
--- a/pkgs/development/python-modules/cattrs/default.nix
+++ b/pkgs/development/python-modules/cattrs/default.nix
@@ -6,6 +6,7 @@
 , immutables
 , motor
 , msgpack
+, orjson
 , poetry-core
 , pytest-xdist
 , pytestCheckHook
@@ -18,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "cattrs";
-  version = "1.10.0";
+  version = "22.1.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -27,7 +28,7 @@ buildPythonPackage rec {
     owner = "python-attrs";
     repo = pname;
     rev = "v${version}";
-    hash = "sha256-VbfQMMDO03eeUHAACxoX6a3DKmzoF9EfLuTpvaY6bWs=";
+    hash = "sha256-C8uIsewpgJfB1yYckWTwF5K32+2AAOrxFKB9I18RENg=";
   };
 
   nativeBuildInputs = [
@@ -45,6 +46,7 @@ buildPythonPackage rec {
     immutables
     motor
     msgpack
+    orjson
     pytest-xdist
     pytestCheckHook
     pyyaml
diff --git a/pkgs/development/python-modules/celery/default.nix b/pkgs/development/python-modules/celery/default.nix
index 1a04fce11dc39..67c3c58794d5f 100644
--- a/pkgs/development/python-modules/celery/default.nix
+++ b/pkgs/development/python-modules/celery/default.nix
@@ -10,6 +10,7 @@
 , click-repl
 , dnspython
 , fetchPypi
+, fetchpatch
 , kombu
 , moto
 , pymongo
@@ -35,6 +36,19 @@ buildPythonPackage rec {
     hash = "sha256-+vvYKTTTD4oAT4Ho96Bi4xQToj1ES+juMyZVORWVjG0=";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "billiard-4.0-comat.patch";
+      url = "https://github.com/celery/celery/commit/b260860988469ef8ad74f2d4225839c2fa91d590.patch";
+      hash = "sha256-NWB/UB0fE7A/vgMRYz6QGmqLmyN1ninAMyL4V2tpzto=";
+    })
+  ];
+
+  postPatch = ''
+    substituteInPlace requirements/default.txt \
+      --replace "billiard>=3.6.4.0,<4.0" "billiard>=3.6.4.0"
+  '';
+
   propagatedBuildInputs = [
     billiard
     click
diff --git a/pkgs/development/python-modules/cffi/default.nix b/pkgs/development/python-modules/cffi/default.nix
index 22d2e87cd276c..7691d9b7d59b4 100644
--- a/pkgs/development/python-modules/cffi/default.nix
+++ b/pkgs/development/python-modules/cffi/default.nix
@@ -4,11 +4,11 @@
 
 if isPyPy then null else buildPythonPackage rec {
   pname = "cffi";
-  version = "1.15.0";
+  version = "1.15.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "920f0d66a896c2d99f0adbb391f990a84091179542c205fa53ce5787aff87954";
+    sha256 = "sha256-1AC/uaN7E1ElPLQCZxzqfom97MKU6AFqcH9tHYrJNPk=";
   };
 
   outputs = [ "out" "dev" ];
diff --git a/pkgs/development/python-modules/cfn-lint/default.nix b/pkgs/development/python-modules/cfn-lint/default.nix
index 1c5b96ea48cd8..238f5e83630ef 100644
--- a/pkgs/development/python-modules/cfn-lint/default.nix
+++ b/pkgs/development/python-modules/cfn-lint/default.nix
@@ -19,13 +19,13 @@
 
 buildPythonPackage rec {
   pname = "cfn-lint";
-  version = "0.58.2";
+  version = "0.61.2";
 
   src = fetchFromGitHub {
     owner = "aws-cloudformation";
     repo = "cfn-python-lint";
-    rev = "v${version}";
-    sha256 = "sha256-ArpvP4tbRf1fK8BPokRXqS3YyaFiOLBrR8uQHko5iKo=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-282h1fBWhAfwqCuP+dU3ajn0gQtmOcPNTMKZ0a2+vHU=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/chainer/default.nix b/pkgs/development/python-modules/chainer/default.nix
index 1585d6d5e895c..55a316ceab99a 100644
--- a/pkgs/development/python-modules/chainer/default.nix
+++ b/pkgs/development/python-modules/chainer/default.nix
@@ -5,14 +5,14 @@
 
 buildPythonPackage rec {
   pname = "chainer";
-  version = "7.8.1";
+  version = "7.8.1.post1";
   disabled = !isPy3k; # python2.7 abandoned upstream
 
   src = fetchFromGitHub {
     owner = "chainer";
     repo = "chainer";
-    rev = "v${version}";
-    sha256 = "1n07zjzc4g92m1sbgxvnansl0z00y4jnhma2mw06vnahs7s9nrf6";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-epwnExmyCWmwaOz+mJnAl1peEeHLBdQGC62BlLfSTQQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/channels/default.nix b/pkgs/development/python-modules/channels/default.nix
index d027c194675b6..e4c8658f59bfc 100644
--- a/pkgs/development/python-modules/channels/default.nix
+++ b/pkgs/development/python-modules/channels/default.nix
@@ -32,6 +32,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   pythonImportsCheck = [ "channels" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/chardet/default.nix b/pkgs/development/python-modules/chardet/default.nix
index 7753d6ccfdebc..b5cca5110e7c4 100644
--- a/pkgs/development/python-modules/chardet/default.nix
+++ b/pkgs/development/python-modules/chardet/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "chardet";
-  version = "4.0.0";
+  version = "5.0.0";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-DW9ToV20Eg8rCMlPEefZPSyRHuEYtrMKBOw+6DEBefo=";
+    sha256 = "sha256-A2jfK/14tfwgVyu06bt/tT4sCU9grpmTM56GcdCvuKo=";
   };
 
   checkInputs = [
@@ -21,6 +21,11 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  disabledTests = [
+    # flaky; https://github.com/chardet/chardet/issues/256
+    "test_detect_all_and_detect_one_should_agree"
+  ];
+
   pythonImportsCheck = [ "chardet" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/charset-normalizer/default.nix b/pkgs/development/python-modules/charset-normalizer/default.nix
index d406ea15fbd38..9661700a28588 100644
--- a/pkgs/development/python-modules/charset-normalizer/default.nix
+++ b/pkgs/development/python-modules/charset-normalizer/default.nix
@@ -7,7 +7,7 @@
 
 buildPythonPackage rec {
   pname = "charset-normalizer";
-  version = "2.0.12";
+  version = "2.1.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.5";
@@ -15,8 +15,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "Ousret";
     repo = "charset_normalizer";
-    rev = version;
-    hash = "sha256-d5vWnZtFR669l1Meg4ZSsYIyBlJZya7SpXJMx2AP8NU=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-ntNMHjkQJqzSElEeyFmPIjUh6ZxQkTktPipfPHiJ/Vc=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/chart-studio/default.nix b/pkgs/development/python-modules/chart-studio/default.nix
index 30a620b5ad6f3..440739226970c 100644
--- a/pkgs/development/python-modules/chart-studio/default.nix
+++ b/pkgs/development/python-modules/chart-studio/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "chart-studio";
-  version = "5.6.0";
+  version = "5.9.0";
 
   # chart-studio was split from plotly
   src = fetchFromGitHub {
     owner = "plotly";
     repo = "plotly.py";
-    rev = "v${version}";
-    sha256 = "sha256-mf4QASdvO7doV5pKAAEzaKJP66w29osBlbLrJuopUvA=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-o14uP7czY4DDTFDabOk7aTF3mMPmBrPg1/fkoIUlab8=";
   };
 
   sourceRoot = "source/packages/python/chart-studio";
diff --git a/pkgs/development/python-modules/cheroot/default.nix b/pkgs/development/python-modules/cheroot/default.nix
index 5535f577bcff4..da5870f7d5006 100644
--- a/pkgs/development/python-modules/cheroot/default.nix
+++ b/pkgs/development/python-modules/cheroot/default.nix
@@ -6,7 +6,6 @@
 , jaraco_text
 , more-itertools
 , portend
-, pyopenssl
 , pypytools
 , pytest-mock
 , pytestCheckHook
@@ -17,7 +16,6 @@
 , setuptools-scm
 , setuptools-scm-git-archive
 , six
-, trustme
 }:
 
 buildPythonPackage rec {
@@ -45,14 +43,12 @@ buildPythonPackage rec {
   checkInputs = [
     jaraco_text
     portend
-    pyopenssl
     pypytools
     pytest-mock
     pytestCheckHook
     requests
     requests-toolbelt
     requests-unixsocket
-    trustme
   ];
 
   # Disable doctest plugin because times out
@@ -79,6 +75,8 @@ buildPythonPackage rec {
     # avoid attempting to use 3 packages not available on nixpkgs
     # (jaraco.apt, jaraco.context, yg.lockfile)
     "cheroot/test/test_wsgi.py"
+    # requires pyopenssl
+    "cheroot/test/test_ssl.py"
   ];
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/cherrypy/default.nix b/pkgs/development/python-modules/cherrypy/default.nix
index 6690a913beb23..bf963ce16aa17 100644
--- a/pkgs/development/python-modules/cherrypy/default.nix
+++ b/pkgs/development/python-modules/cherrypy/default.nix
@@ -8,7 +8,6 @@
 , objgraph
 , path
 , portend
-, pyopenssl
 , pytest-forked
 , pytest-services
 , pytestCheckHook
@@ -24,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "cherrypy";
-  version = "18.6.1";
+  version = "18.7.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -32,9 +31,18 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "CherryPy";
     inherit version;
-    hash = "sha256-8z6HKG57PjCeBOciXY5JOC2dd3PmCSJB1/YTiTxWNJU=";
+    hash = "sha256-cpRS95jKdWOQBG7zGAQ8roZKRoFN6vPmvTTclZrxmN4=";
   };
 
+  postPatch = ''
+    # Disable doctest plugin because times out
+    substituteInPlace pytest.ini \
+      --replace "--doctest-modules" "-vvv" \
+      --replace "-p pytest_cov" "" \
+      --replace "--no-cov-on-fail" ""
+    sed -i "/--cov/d" pytest.ini
+  '';
+
   nativeBuildInputs = [
     setuptools-scm
   ];
@@ -56,13 +64,6 @@ buildPythonPackage rec {
     requests-toolbelt
   ];
 
-  preCheck = ''
-    # Disable doctest plugin because times out
-    substituteInPlace pytest.ini \
-      --replace "--doctest-modules" "-vvv"
-    sed -i "/--cov/d" pytest.ini
-  '';
-
   pytestFlagsArray = [
     "-W"
     "ignore::DeprecationWarning"
@@ -74,6 +75,9 @@ buildPythonPackage rec {
     # daemonize and autoreload tests have issue with sockets within sandbox
     "daemonize"
     "Autoreload"
+
+    "test_antistampede"
+    "test_file_stream"
   ] ++ lib.optionals stdenv.isDarwin [
     "test_block"
   ];
@@ -92,7 +96,6 @@ buildPythonPackage rec {
     json = [ simplejson ];
     memcached_session = [ python-memcached ];
     routes_dispatcher = [ routes ];
-    ssl = [ pyopenssl ];
     # not packaged yet
     xcgi = [ /* flup */ ];
   };
diff --git a/pkgs/development/python-modules/chex/default.nix b/pkgs/development/python-modules/chex/default.nix
index a06cb4ec84bba..98598e4acf15c 100644
--- a/pkgs/development/python-modules/chex/default.nix
+++ b/pkgs/development/python-modules/chex/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "chex";
-  version = "0.1.2";
+  version = "0.1.3";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "deepmind";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-NtZYOHByKBcKmhRaNULwaQqxfoPRmgbtJ3cFHNfy4E8=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-oIdRh0WKzdvyCfcamKRDiMsV51b6rdmNYcELjDQKGX4=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/chiapos/default.nix b/pkgs/development/python-modules/chiapos/default.nix
index 54aa1efeefc1f..11452dee2ea58 100644
--- a/pkgs/development/python-modules/chiapos/default.nix
+++ b/pkgs/development/python-modules/chiapos/default.nix
@@ -16,12 +16,12 @@
 
 buildPythonPackage rec {
   pname = "chiapos";
-  version = "1.0.9";
+  version = "1.0.10";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-emEHIR74RiIDK04etO/6G7tjzTufOVl4rLRWbEsQit0=";
+    sha256 = "sha256-2SqWdGzSXs53PafXnCvTGQXNJqD+5gdJnaYi2O2ABLg=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/cloudsmith-api/default.nix b/pkgs/development/python-modules/cloudsmith-api/default.nix
index 0320355060054..1d5a2047a7c39 100644
--- a/pkgs/development/python-modules/cloudsmith-api/default.nix
+++ b/pkgs/development/python-modules/cloudsmith-api/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "cloudsmith-api";
-  version = "1.42.3";
+  version = "1.61.3";
 
   format = "wheel";
 
   src = fetchPypi {
     pname = "cloudsmith_api";
     inherit format version;
-    sha256 = "sha256-P0QuKkyFk3jvYJwtul0/eUTrDyj2QKAjU/Ac+4VCYYk=";
+    sha256 = "sha256-Y8CnbX9rhtk8sebJKo5kyqFwCkJgBjz3dgm58VHRPhY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/cma/default.nix b/pkgs/development/python-modules/cma/default.nix
index c0480f2fa714c..a6e3d442675f6 100644
--- a/pkgs/development/python-modules/cma/default.nix
+++ b/pkgs/development/python-modules/cma/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "cma";
-  version = "3.2.1";
+  version = "3.2.2";
 
   src = fetchFromGitHub {
     owner = "CMA-ES";
     repo = "pycma";
-    rev = "r${version}";
-    sha256 = "sha256-wLUD8HMJusUeCwwp37D/W7yJuJQcDfRwVGVKwBS6sR8=";
+    rev = "refs/tags/r${version}";
+    sha256 = "sha256-STF7jtLqI2KiWvvI9/reRjP1XyW8l4/qy9uAPpE9mTs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/cmd2/default.nix b/pkgs/development/python-modules/cmd2/default.nix
index 79cd6187ddb27..ada33a8594ef2 100644
--- a/pkgs/development/python-modules/cmd2/default.nix
+++ b/pkgs/development/python-modules/cmd2/default.nix
@@ -17,13 +17,13 @@
 
 buildPythonPackage rec {
   pname = "cmd2";
-  version = "2.4.0";
+  version = "2.4.2";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-CQkJq2yOzuQIE87HWeYd1ucMgiehqOlggvXysNOUvHc=";
+    sha256 = "sha256-Bz5VXAWFOw9pZfPQMym6vfnjil8s6gKOYaZM1+63StU=";
   };
 
   LC_ALL = "en_US.UTF-8";
diff --git a/pkgs/development/python-modules/colorama/default.nix b/pkgs/development/python-modules/colorama/default.nix
index f362bbd30b3c4..76f9063ab9a47 100644
--- a/pkgs/development/python-modules/colorama/default.nix
+++ b/pkgs/development/python-modules/colorama/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "colorama";
-  version = "0.4.4";
+  version = "0.4.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5941b2b48a20143d2267e95b1c2a7603ce057ee39fd88e7329b0c292aa16869b";
+    sha256 = "sha256-5sa0M0/FCYimOdm5iqQpoLV9puF7mkTwRR+TC2lnt6Q=";
   };
 
   # No tests in archive
diff --git a/pkgs/development/python-modules/confluent-kafka/default.nix b/pkgs/development/python-modules/confluent-kafka/default.nix
index 0143ffd1aa301..2da762f26d7d5 100644
--- a/pkgs/development/python-modules/confluent-kafka/default.nix
+++ b/pkgs/development/python-modules/confluent-kafka/default.nix
@@ -1,12 +1,12 @@
 { lib, buildPythonPackage, fetchPypi, isPy3k, rdkafka, requests, avro3k, avro ? null, futures ? null, enum34 ? null }:
 
 buildPythonPackage rec {
-  version = "1.8.2";
+  version = "1.9.0";
   pname = "confluent-kafka";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b79e836c3554bc51c6837a8a0152f7521c9bf31342f5b8e21eba6b28044fa585";
+    sha256 = "sha256-L4cARHNxjRl29XyeIzB8IW2vjL1H/6cRXvDOSJY8nGk=";
   };
 
   buildInputs = [ rdkafka requests ] ++ (if isPy3k then [ avro3k ] else [ enum34 avro futures ]) ;
diff --git a/pkgs/development/python-modules/coqui-trainer/default.nix b/pkgs/development/python-modules/coqui-trainer/default.nix
index b7b08325e0b4a..da8255a3b5a3d 100644
--- a/pkgs/development/python-modules/coqui-trainer/default.nix
+++ b/pkgs/development/python-modules/coqui-trainer/default.nix
@@ -17,7 +17,7 @@
 
 let
   pname = "coqui-trainer";
-  version = "0.0.12";
+  version = "0.0.13";
 in
 buildPythonPackage {
   inherit pname version;
@@ -26,8 +26,8 @@ buildPythonPackage {
   src = fetchFromGitHub {
     owner = "coqui-ai";
     repo = "Trainer";
-    rev = "v${version}";
-    hash = "sha256-MSB3XbQALEKQi6Jtr/d2K8cIqyZryebYEcewGG48HV0=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-tRm/TElGjVTgCrI80wCt4F1hO82CsDPz2ynJzQKmbIs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/coverage/default.nix b/pkgs/development/python-modules/coverage/default.nix
index 8019fc9496655..6893458d5cc75 100644
--- a/pkgs/development/python-modules/coverage/default.nix
+++ b/pkgs/development/python-modules/coverage/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "coverage";
-  version = "6.3.2";
+  version = "6.4.2";
   # uses f strings
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-A+KngmCGuR7zRf8YdC7p/Eemg5zNUXBh74+hl25lLOk=";
+    sha256 = "sha256-bDzP6Jw28+W5g3ue5QdHIxAWTzUsn+MyEgt2TJ1grb4=";
   };
 
   # No tests in archive
diff --git a/pkgs/development/python-modules/crate/default.nix b/pkgs/development/python-modules/crate/default.nix
index c4a698c5250a0..a7d7dc3ec603f 100644
--- a/pkgs/development/python-modules/crate/default.nix
+++ b/pkgs/development/python-modules/crate/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "crate";
-  version = "0.26.0";
+  version = "0.27.1";
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6f650c2efe250b89bf35f8fe3211eb37ebc8d76f7a9c09bd73db3076708fa2fc";
+    sha256 = "sha256-YYzn13yaTTVt4mxbE8wbymGrisraMRRHodydawSy/Uc=";
   };
 
   propagatedBuildInputs = [
@@ -30,20 +30,19 @@ buildPythonPackage rec {
   ];
 
   disabledTests = [
-    "RequestsCaBundleTest"
+    # network access
+    "test_layer_from_uri"
+  ];
+
+  disabledTestPaths = [
+    # imports setuptools.ssl_support, which doesn't exist anymore
+    "src/crate/client/test_http.py"
   ];
-  disabledTestPaths = lib.optionals stdenv.isDarwin [ "src/crate/client/test_http.py" ];
 
   meta = with lib; {
     homepage = "https://github.com/crate/crate-python";
     description = "A Python client library for CrateDB";
     license = licenses.asl20;
     maintainers = with maintainers; [ doronbehar ];
-    # 2021-07-12 (@layus): Please unbreak when an update fixes compatibility
-    # with the version of SQLAlchemy in nixpkgs
-    # And also re-enable tests in pythonPackages.agate-sql.
-    # The version string below is intentionally split, so nixpkgs-update does
-    # not change it. That would make this warning pretty useless.
-    broken = assert version == "0.2"+"6.0"; true;
   };
 }
diff --git a/pkgs/development/python-modules/croniter/default.nix b/pkgs/development/python-modules/croniter/default.nix
index 1b122f9b5e414..8f21b00697c0a 100644
--- a/pkgs/development/python-modules/croniter/default.nix
+++ b/pkgs/development/python-modules/croniter/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "croniter";
-  version = "1.3.4";
+  version = "1.3.5";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-MWk2WRaDS+ZUwsrFfqFNcQ50L464pfzoBPbOVI2oC/I=";
+    hash = "sha256-dZL8DooA2Cr5jfonaLdZg7b7TCrcj20NfJMacVt87+4=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/cryptography/default.nix b/pkgs/development/python-modules/cryptography/default.nix
index 08314f71308ef..1442b784cb374 100644
--- a/pkgs/development/python-modules/cryptography/default.nix
+++ b/pkgs/development/python-modules/cryptography/default.nix
@@ -27,19 +27,19 @@ let
 in
 buildPythonPackage rec {
   pname = "cryptography";
-  version = "37.0.2"; # Also update the hash in vectors.nix
+  version = "37.0.4"; # Also update the hash in vectors.nix
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-8iStJTzJzqdWj0kHcAfSJj76VzlqLy94EUBm/VS1xo4=";
+    hash = "sha256-Y/nBfA4kdMy+vJMCzi8HtVs7P8shHe0YpC1XZPXBCoI=";
   };
 
   cargoDeps = rustPlatform.fetchCargoTarball {
     inherit src;
     sourceRoot = "${pname}-${version}/${cargoRoot}";
     name = "${pname}-${version}";
-    sha256 = "sha256-qvrxvneoBXjP96AnUPyrtfmCnZo+IriHR5HbtWQ5Gk8=";
+    hash = "sha256-f8r6QclTwkgK20CNe9i65ZOqvSUeDc4Emv6BFBhh1hI=";
   };
 
   cargoRoot = "src/rust";
diff --git a/pkgs/development/python-modules/cryptography/vectors.nix b/pkgs/development/python-modules/cryptography/vectors.nix
index d2c2beb9aba67..3059d01a4091f 100644
--- a/pkgs/development/python-modules/cryptography/vectors.nix
+++ b/pkgs/development/python-modules/cryptography/vectors.nix
@@ -8,7 +8,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "cryptography_vectors";
     inherit version;
-    sha256 = "sha256-fGXT3lF1b0GBQt9gVBfsLG6WHDZPcMyKEDAwiJ1aMhk=";
+    hash = "sha256-WmFABRDiiTelZUtAxupOPlk8Wq8MIIHFuRLw58+IPqg=";
   };
 
   # No tests included
diff --git a/pkgs/development/python-modules/cssselect2/default.nix b/pkgs/development/python-modules/cssselect2/default.nix
index 987e84ffcee2f..5904f80ac2a29 100644
--- a/pkgs/development/python-modules/cssselect2/default.nix
+++ b/pkgs/development/python-modules/cssselect2/default.nix
@@ -9,13 +9,13 @@
 
 buildPythonPackage rec {
   pname = "cssselect2";
-  version = "0.5.0";
+  version = "0.6.0";
   format = "pyproject";
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-2Yp7vdjrxGCTJ5GV1mmjNZvVoj+QwZ6CwZ2e7vMz5hc=";
+    sha256 = "sha256-W11t6oGl6wyco58RbIV43UE3eAYMlMH1EZY3FhiQkyU=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/cupy/default.nix b/pkgs/development/python-modules/cupy/default.nix
index cdd11e5010be4..f4bb936102663 100644
--- a/pkgs/development/python-modules/cupy/default.nix
+++ b/pkgs/development/python-modules/cupy/default.nix
@@ -9,12 +9,12 @@ let
   inherit (cudaPackages) cudatoolkit cudnn cutensor nccl;
 in buildPythonPackage rec {
   pname = "cupy";
-  version = "10.3.1";
+  version = "10.6.0";
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-c8BOKI1AWU+zN8lhliRus55PUAgvFm+TlxKToYn7jWc=";
+    sha256 = "sha256-9jWpfd4l4LSptJewdQaaurm/huHcKv48+XOZDCLTJV8=";
   };
 
   # See https://docs.cupy.dev/en/v10.2.0/reference/environment.html. Seting both
diff --git a/pkgs/development/python-modules/cx_freeze/default.nix b/pkgs/development/python-modules/cx_freeze/default.nix
index bce1a33a36fa5..454e2e8f2ccfb 100644
--- a/pkgs/development/python-modules/cx_freeze/default.nix
+++ b/pkgs/development/python-modules/cx_freeze/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "cx_Freeze";
-  version = "6.10";
+  version = "6.11.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-5bcb9XuYgawUL76+riyLDTKUtW9uSKtkAyMh47Giuic=";
+    sha256 = "sha256-jzowyeM5TykGVeNG07RgkQZWswrGNHqHSZu1rTZcbnw=";
   };
 
   disabled = pythonOlder "3.5";
diff --git a/pkgs/development/python-modules/cypherpunkpay/default.nix b/pkgs/development/python-modules/cypherpunkpay/default.nix
index 3c72f2e073ed8..8ef0f4cac78c1 100644
--- a/pkgs/development/python-modules/cypherpunkpay/default.nix
+++ b/pkgs/development/python-modules/cypherpunkpay/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "cypherpunkpay";
-  version = "1.0.15";
+  version = "1.0.16";
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "CypherpunkPay";
     repo = "CypherpunkPay";
-    rev = "v${version}";
-    sha256 = "sha256-W2f4jtEqopDXiXx0pklZrjOmVhpx2kDdTJRPm2Ka0Cg=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-X0DB0PVwR0gRnt3jixFzglWAOPKBMvqTOG6pK6OJ03w=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/cytoolz/default.nix b/pkgs/development/python-modules/cytoolz/default.nix
index 9b1b9ecb8da61..42305b4557996 100644
--- a/pkgs/development/python-modules/cytoolz/default.nix
+++ b/pkgs/development/python-modules/cytoolz/default.nix
@@ -3,6 +3,7 @@
 , fetchPypi
 , isPyPy
 , pytestCheckHook
+, cython
 , toolz
 , python
 , isPy27
@@ -10,14 +11,16 @@
 
 buildPythonPackage rec {
   pname = "cytoolz";
-  version = "0.11.2";
+  version = "0.12.0";
   disabled = isPy27 || isPyPy;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "ea23663153806edddce7e4153d1d407d62357c05120a4e8485bddf1bd5ab22b4";
+    sha256 = "sha256-wQWwX4XgP7zWAkQ3WWjmLkT+eYwVo1Mcki1TEBjSJBI=";
   };
 
+  nativeBuildInputs = [ cython ];
+
   propagatedBuildInputs = [ toolz ];
 
   # tests are located in cytoolz/tests, however we can't import cytoolz
diff --git a/pkgs/development/python-modules/dask-gateway/default.nix b/pkgs/development/python-modules/dask-gateway/default.nix
index 81aa8de8bcfc2..5f2634a174809 100644
--- a/pkgs/development/python-modules/dask-gateway/default.nix
+++ b/pkgs/development/python-modules/dask-gateway/default.nix
@@ -9,11 +9,11 @@
 buildPythonPackage rec {
   pname = "dask-gateway";
   # update dask-gateway lock step with dask-gateway-server
-  version = "0.9.0";
+  version = "2022.6.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "743f3b88dabe7d1503ac08aadf399eb9205df786b12c5175ea2e10c6ded7df22";
+    sha256 = "sha256-i0OFXjvDg+D4Sdyg6rluP0k6/Ecr+VZn+RiIEQONQX0=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/dask-jobqueue/default.nix b/pkgs/development/python-modules/dask-jobqueue/default.nix
index 430047cb790cc..cc56413eea395 100644
--- a/pkgs/development/python-modules/dask-jobqueue/default.nix
+++ b/pkgs/development/python-modules/dask-jobqueue/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "dask-jobqueue";
-  version = "0.7.3";
+  version = "0.7.4";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-aC18wOazGbarg6eomGgMEunHfdx33zgLQAQSkPVdTnk=";
+    hash = "sha256-XoQwazgJuFvhoEezhhGu2YvIp+VFAe7dhGIEVnuQ5kM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/dask/default.nix b/pkgs/development/python-modules/dask/default.nix
index 3aec3e25228c2..8453b3e0ec9c4 100644
--- a/pkgs/development/python-modules/dask/default.nix
+++ b/pkgs/development/python-modules/dask/default.nix
@@ -26,7 +26,7 @@
 
 buildPythonPackage rec {
   pname = "dask";
-  version = "2022.05.2";
+  version = "2022.7.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -35,7 +35,7 @@ buildPythonPackage rec {
     owner = "dask";
     repo = pname;
     rev = version;
-    hash = "sha256-8M70Pf31PhYnBPRhSG55eWg6gK0lxsIFKF+cRCsf0/U=";
+    hash = "sha256-O5/TNeta0V0v9WTpPmF/kJMJ40ANo6rcRtzurr5/SwA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/databricks-cli/default.nix b/pkgs/development/python-modules/databricks-cli/default.nix
index 25fd928710121..22cbd96cae005 100644
--- a/pkgs/development/python-modules/databricks-cli/default.nix
+++ b/pkgs/development/python-modules/databricks-cli/default.nix
@@ -1,5 +1,6 @@
 { lib, buildPythonPackage, fetchPypi
 , click
+, oauthlib
 , requests
 , tabulate
 , six
@@ -9,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "databricks-cli";
-  version = "0.16.4";
+  version = "0.17.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-GBiQaBg7YY31bJft0W8Iq7WXhX98wPgPFHdNwuZ7WQY=";
+    sha256 = "sha256-SvoX2nPG6TygnF/fJPo1UpZYVLu8PxQoz00n7bdRtyw=";
   };
 
   checkInputs = [
@@ -26,6 +27,7 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [
     click
+    oauthlib
     requests
     tabulate
     six
diff --git a/pkgs/development/python-modules/databricks-connect/default.nix b/pkgs/development/python-modules/databricks-connect/default.nix
index e9fcda9deda52..7a494e55d8c65 100644
--- a/pkgs/development/python-modules/databricks-connect/default.nix
+++ b/pkgs/development/python-modules/databricks-connect/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "databricks-connect";
-  version = "9.1.17";
+  version = "10.4.6";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-QBGeXZ8zvRRjmKGs0vyBWTvcug3PF/BFV2asYTqsScw=";
+    sha256 = "sha256-Dezqn6rZysRhDQFUuTgXdoJL9dn21Bx2QlryBG9MtR0=";
   };
 
   sourceRoot = ".";
diff --git a/pkgs/development/python-modules/datasets/default.nix b/pkgs/development/python-modules/datasets/default.nix
index aa3cd42e50867..2c73d62de7df5 100644
--- a/pkgs/development/python-modules/datasets/default.nix
+++ b/pkgs/development/python-modules/datasets/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "datasets";
-  version = "1.18.3";
+  version = "2.3.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -28,10 +28,15 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "huggingface";
     repo = pname;
-    rev = version;
-    hash = "sha256-2x6DpsDcVF2O5iJKeMEGw/aJwZPc7gSGaK2947c3B6s=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-VBYCDEOK5KyYuvlybr37LgOchlEUAl/aqiC+J6WQbSA=";
   };
 
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "responses<0.19" "responses"
+  '';
+
   propagatedBuildInputs = [
     aiohttp
     dill
diff --git a/pkgs/development/python-modules/dbus/default.nix b/pkgs/development/python-modules/dbus/default.nix
index 0685ca6fcca57..9d88bb4a9f173 100644
--- a/pkgs/development/python-modules/dbus/default.nix
+++ b/pkgs/development/python-modules/dbus/default.nix
@@ -4,8 +4,9 @@
 buildPythonPackage rec {
   pname = "dbus-python";
   version = "1.2.18";
-  format = "other";
 
+  disabled = isPyPy;
+  format = "other";
   outputs = [ "out" "dev" ];
 
   src = fetchPypi {
@@ -17,11 +18,9 @@ buildPythonPackage rec {
     ./fix-includedir.patch
   ];
 
-  disabled = isPyPy;
-
-  preConfigure = if (lib.versionAtLeast stdenv.hostPlatform.darwinMinVersion "11" && stdenv.isDarwin) then ''
+  preConfigure = lib.optionalString (lib.versionAtLeast stdenv.hostPlatform.darwinMinVersion "11" && stdenv.isDarwin) ''
     MACOSX_DEPLOYMENT_TARGET=10.16
-  '' else null;
+  '';
 
   configureFlags = [
     "PYTHON=${python.pythonForBuild.interpreter}"
@@ -36,9 +35,10 @@ buildPythonPackage rec {
   doCheck = isPy3k;
   checkInputs = [ dbus.out pygobject3 ];
 
-  meta = {
+  meta = with lib; {
     description = "Python DBus bindings";
-    license = lib.licenses.mit;
+    license = licenses.mit;
     platforms = dbus.meta.platforms;
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/development/python-modules/ddt/default.nix b/pkgs/development/python-modules/ddt/default.nix
index bc5964c737699..f419a717f083c 100644
--- a/pkgs/development/python-modules/ddt/default.nix
+++ b/pkgs/development/python-modules/ddt/default.nix
@@ -9,23 +9,28 @@
 
 buildPythonPackage rec {
   pname = "ddt";
-  version = "1.4.4";
+  version = "1.5.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8de39a69730442dc835e4d33f9d2e33043ff91151c8d18086959ee556febb9f8";
+    sha256 = "sha256-2q1rxfx2GeWqfu1sOU4Fv4KUYWChPl3y4m3hdsuvNH4=";
   };
 
-  checkInputs = [ six pyyaml mock pytestCheckHook ];
-
   propagatedBuildInputs = lib.optionals (!isPy3k) [
     enum34
   ];
 
+  checkInputs = [ six pyyaml mock pytestCheckHook ];
+
+  preCheck = ''
+    # pytest can't import one file even with PYTHONPATH set
+    rm test/test_named_data.py
+  '';
+
   meta = with lib; {
     description = "Data-Driven/Decorated Tests, a library to multiply test cases";
     homepage = "https://github.com/txels/ddt";
+    maintainers = with maintainers; [ ];
     license = licenses.mit;
   };
-
 }
diff --git a/pkgs/development/python-modules/debugpy/default.nix b/pkgs/development/python-modules/debugpy/default.nix
index 04b78d6c80232..5be044690e0fb 100644
--- a/pkgs/development/python-modules/debugpy/default.nix
+++ b/pkgs/development/python-modules/debugpy/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "debugpy";
-  version = "1.6.0";
+  version = "1.6.2";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "Microsoft";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-WfZz2SimOTpG8CWNUic8NSp4Qd2JTXk+7JSUEPhuQ6Q=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-jcokiAZ2WwyIvsXNIUzvMIrRttR76RwDSE7gk0xHExc=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/dill/default.nix b/pkgs/development/python-modules/dill/default.nix
index ac57417427812..9167e629d573e 100644
--- a/pkgs/development/python-modules/dill/default.nix
+++ b/pkgs/development/python-modules/dill/default.nix
@@ -1,20 +1,18 @@
 { lib
 , buildPythonPackage
 , fetchFromGitHub
-, isPy27
 , pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "dill";
-  version = "0.3.4";
-  doCheck = !isPy27;
+  version = "0.3.5.1";
 
   src = fetchFromGitHub {
     owner = "uqfoundation";
     repo = pname;
-    rev = "${pname}-${version}";
-    sha256 = "0x702gh50wb3n820p2p9w49cn4a354y207pllwc7snfxprv6hypm";
+    rev = "refs/tags/dill-${version}";
+    sha256 = "sha256-gWE7aQodblgHjUqGAzOJGgxJ4qx9wHo/DU4KRE6JMWo=";
   };
 
   checkInputs = [
@@ -27,13 +25,16 @@ buildPythonPackage rec {
     "tests/test_diff.py"
     "tests/test_module.py"
     "tests/test_objects.py"
+    "tests/test_session.py"
   ];
 
   disabledTests = [
     "test_class_objects"
-    "test_method_decorator"
     "test_importable"
+    "test_method_decorator"
     "test_the_rest"
+    # test exception catching needs updating, can probably be removed with next update
+    "test_recursive_function"
   ];
 
   pythonImportsCheck = [ "dill" ];
diff --git a/pkgs/development/python-modules/discovery30303/default.nix b/pkgs/development/python-modules/discovery30303/default.nix
index 49de32439d12a..c9b09cbfe69c4 100644
--- a/pkgs/development/python-modules/discovery30303/default.nix
+++ b/pkgs/development/python-modules/discovery30303/default.nix
@@ -31,6 +31,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   postPatch = ''
     substituteInPlace pyproject.toml \
       --replace " --cov=discovery30303" ""
diff --git a/pkgs/development/python-modules/distributed/default.nix b/pkgs/development/python-modules/distributed/default.nix
index 426ee1107909c..646899d36cf82 100644
--- a/pkgs/development/python-modules/distributed/default.nix
+++ b/pkgs/development/python-modules/distributed/default.nix
@@ -21,16 +21,21 @@
 
 buildPythonPackage rec {
   pname = "distributed";
-  version = "2022.5.2";
+  version = "2022.7.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-BEqsUfpk/Z4WsaLEMVIg0oHw5cwbBfTT03hSQm8efLY=";
+    hash = "sha256-5oq6i+PiDl0RIKvKyEGQn/GAIXCKhBKvpY/xU8T6sKw=";
   };
 
+  postPatch = ''
+    substituteInPlace requirements.txt \
+      --replace "tornado >= 6.0.3, <6.2" "tornado >= 6.0.3"
+  '';
+
   propagatedBuildInputs = [
     click
     cloudpickle
diff --git a/pkgs/development/python-modules/dj-rest-auth/default.nix b/pkgs/development/python-modules/dj-rest-auth/default.nix
index d0fe922dc1815..be31d9cd47968 100644
--- a/pkgs/development/python-modules/dj-rest-auth/default.nix
+++ b/pkgs/development/python-modules/dj-rest-auth/default.nix
@@ -10,13 +10,13 @@
 
 buildPythonPackage rec {
   pname = "dj-rest-auth";
-  version = "2.2.4";
+  version = "2.2.5";
 
   src = fetchFromGitHub {
     owner = "iMerica";
     repo = "dj-rest-auth";
     rev = version;
-    sha256 = "sha256-vzcrGRaim1plksmkf8AC6sTl5P+106UG391Cy2yKQhQ=";
+    sha256 = "sha256-1oxkl7MJ2wIhcHlgxnCtj9Cp8o1puzNWs+vlMyi+3RM=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/django-dynamic-preferences/default.nix b/pkgs/development/python-modules/django-dynamic-preferences/default.nix
index c9a0f10947ea0..10cb2d132aa80 100644
--- a/pkgs/development/python-modules/django-dynamic-preferences/default.nix
+++ b/pkgs/development/python-modules/django-dynamic-preferences/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "django-dynamic-preferences";
-  version = "1.12.0";
+  version = "1.13.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-zYmHz45N024BmtPoolxYm8S0EMpKZs38vlwlpRenwK0=";
+    sha256 = "sha256-t7E8kTtbb24FyICv6uGpGxR6W8EfuVB5FR2cyItgalA=";
   };
 
   propagatedBuildInputs = [ six django persisting-theory ];
diff --git a/pkgs/development/python-modules/django-haystack/default.nix b/pkgs/development/python-modules/django-haystack/default.nix
index 0f0f4a0a11743..b391fcac495e9 100644
--- a/pkgs/development/python-modules/django-haystack/default.nix
+++ b/pkgs/development/python-modules/django-haystack/default.nix
@@ -20,13 +20,13 @@
 
 buildPythonPackage rec {
   pname = "django-haystack";
-  version = "3.1.1";
+  version = "3.2.1";
   format = "setuptools";
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6d05756b95d7d5ec1dbd4668eb999ced1504b47f588e2e54be53b1404c516a82";
+    sha256 = "sha256-l+MZeu/CJf5AW28XYAolNL+CfLTWdDEwwgvBoG9yk6Q=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/django-hijack/default.nix b/pkgs/development/python-modules/django-hijack/default.nix
index 78cce76ca5b0d..326db4e3232a6 100644
--- a/pkgs/development/python-modules/django-hijack/default.nix
+++ b/pkgs/development/python-modules/django-hijack/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "django-hijack";
-  version = "3.2.0";
+  version = "3.2.1";
 
   # the wheel comes with pre-built assets, allowing us to avoid fighting
   # with npm/webpack/gettext to build them ourselves.
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     pname = "django_hijack";
     dist = "py3";
     python = "py3";
-    sha256 = "1ixn7ppmbq1bgqahwv3z57hk80ql7sxpwl8jms7y8w5z1h91cn86";
+    sha256 = "sha256-sHI3ULJH5bH2n2AKQLHVEkBAYfM5GOC/+0qpKDFOods=";
   };
 
   propagatedBuildInputs = [ django django_compat ];
diff --git a/pkgs/development/python-modules/django-maintenance-mode/default.nix b/pkgs/development/python-modules/django-maintenance-mode/default.nix
index 86bcc85eb0ae5..fb16843b40341 100644
--- a/pkgs/development/python-modules/django-maintenance-mode/default.nix
+++ b/pkgs/development/python-modules/django-maintenance-mode/default.nix
@@ -2,13 +2,13 @@
 
 buildPythonPackage rec {
   pname = "django-maintenance-mode";
-  version = "0.16.2";
+  version = "0.16.3";
 
   src = fetchFromGitHub {
     owner = "fabiocaccamo";
     repo = pname;
-    rev = version;
-    sha256 = "0krcq04pf4g50q88l7q1wc53jgkhjmvif3acghfqq8c3s2y7mbz7";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-G08xQpLQxnt7JbtIo06z0NlRAMbca3UWbo4aXQR/Wy0=";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/django_compressor/default.nix b/pkgs/development/python-modules/django_compressor/default.nix
index 82684b52374ac..f71582418449f 100644
--- a/pkgs/development/python-modules/django_compressor/default.nix
+++ b/pkgs/development/python-modules/django_compressor/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
     pname = "django_compressor";
-    version = "3.1";
+    version = "4.0";
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "c4a87bf65f9a534cfaf1c321a000a229c24e50c6d62ba6ab089482db42e819d9";
+      sha256 = "sha256-HbkbbQQpNjami9Eyjce7kNY2sClfZ7HMbU+hArn9JfY=";
     };
     postPatch = ''
       substituteInPlace setup.py \
diff --git a/pkgs/development/python-modules/django_environ/default.nix b/pkgs/development/python-modules/django_environ/default.nix
index 633d3e7286eb0..4fa1b0e8cef8c 100644
--- a/pkgs/development/python-modules/django_environ/default.nix
+++ b/pkgs/development/python-modules/django_environ/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "django-environ";
-  version = "0.8.1";
+  version = "0.9.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6f0bc902b43891656b20486938cba0861dc62892784a44919170719572a534cb";
+    sha256 = "sha256-v/U4FTMFYyjJrAL3F5C9W/HOqBsb7rZI8ouByeg+CiE=";
   };
 
   # The testsuite fails to modify the base environment
diff --git a/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix b/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix
index d84a542d0bba2..7a24ba5a84543 100644
--- a/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix
+++ b/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "djangorestframework-simplejwt";
-  version = "5.1.0";
+  version = "5.2.0";
 
   src = fetchPypi {
     pname = "djangorestframework_simplejwt";
     inherit version;
-    sha256 = "sha256-dTI1KKe5EIQ7h5GUdG8OvDSBxK2fNU3i3RYhYGYvuVo=";
+    sha256 = "sha256-pgsJr7J9ka0deskEzGMr1Szs6tjzifD6FTLOsPt1enQ=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/docutils/default.nix b/pkgs/development/python-modules/docutils/default.nix
index 3cd680e062f0e..930077939818c 100644
--- a/pkgs/development/python-modules/docutils/default.nix
+++ b/pkgs/development/python-modules/docutils/default.nix
@@ -8,11 +8,12 @@
 
 buildPythonPackage rec {
   pname = "docutils";
-  version = "0.18.1";
+  version = "0.19";
+  format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-Z5mHyvNhp1OdduWEy+3cMR467pN4d8hzRvMd68Y+nQY=";
+    hash = "sha256-M5laZ1PDC39Xf+v8LFBBH+xqrH9//rfEz+WZEHLc+eY=";
   };
 
   # Only Darwin needs LANG, but we could set it in general.
diff --git a/pkgs/development/python-modules/dogpile-cache/default.nix b/pkgs/development/python-modules/dogpile-cache/default.nix
index f5fde969a8623..c367556b4ecb2 100644
--- a/pkgs/development/python-modules/dogpile-cache/default.nix
+++ b/pkgs/development/python-modules/dogpile-cache/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "dogpile-cache";
-  version = "1.1.7";
+  version = "1.1.8";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     pname = "dogpile.cache";
     inherit version;
-    sha256 = "sha256-IItZCpn6omXG4dEcLOnKZqsLgaU6zXL1aoJe7dI+5cg=";
+    sha256 = "sha256-2ETou2OMxPVEpMiag039Nv6TVAC3GhbL10Tr37cg/U4=";
   };
 
   preCheck = ''
diff --git a/pkgs/development/python-modules/doit/default.nix b/pkgs/development/python-modules/doit/default.nix
index 71cc9f69654c7..2ade1982ec279 100644
--- a/pkgs/development/python-modules/doit/default.nix
+++ b/pkgs/development/python-modules/doit/default.nix
@@ -2,6 +2,7 @@
 , stdenv
 , fetchPypi
 , buildPythonPackage
+, importlib-metadata
 , isPy3k
 , mock
 , pytestCheckHook
@@ -13,17 +14,18 @@
 
 buildPythonPackage rec {
   pname = "doit";
-  version = "0.35.0";
+  version = "0.36.0";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-cVoyLIdMTLhiOU46DWn/MlcrUln1cDb7/cEFPEwB00g=";
+    sha256 = "sha256-cdB8zJUUyyL+WdmJmVd2ZeqrV+FvZE0EM2rgtLriNLw=";
   };
 
   propagatedBuildInputs = [
     cloudpickle
+    importlib-metadata
     toml
   ] ++ lib.optional stdenv.isLinux pyinotify
     ++ lib.optional stdenv.isDarwin macfsevents;
diff --git a/pkgs/development/python-modules/drf-yasg/default.nix b/pkgs/development/python-modules/drf-yasg/default.nix
index 4b55a08f842da..28520e814cb6c 100644
--- a/pkgs/development/python-modules/drf-yasg/default.nix
+++ b/pkgs/development/python-modules/drf-yasg/default.nix
@@ -14,16 +14,16 @@
 
 buildPythonPackage rec {
   pname = "drf-yasg";
-  version = "1.20.0";
+  version = "1.21.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d50f197c7f02545d0b736df88c6d5cf874f8fea2507ad85ad7de6ae5bf2d9e5a";
+    sha256 = "sha256-Lyh3plukEn1+7t+pp3oJbbLjdDvRIddFACmXtBfA2Go=";
   };
 
   postPatch = ''
     # https://github.com/axnsan12/drf-yasg/pull/710
-    substituteInPlace requirements/base.txt --replace packaging ""
+    sed -i "/packaging/d" requirements/base.txt
   '';
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/duckdb-engine/default.nix b/pkgs/development/python-modules/duckdb-engine/default.nix
index ef4bc58459293..234f014a7af14 100644
--- a/pkgs/development/python-modules/duckdb-engine/default.nix
+++ b/pkgs/development/python-modules/duckdb-engine/default.nix
@@ -8,10 +8,12 @@
 , ipython-sql
 , poetry-core
 , sqlalchemy
+, typing-extensions
 }:
+
 buildPythonPackage rec {
   pname = "duckdb-engine";
-  version = "0.1.11";
+  version = "0.2.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -19,15 +21,15 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     repo = "duckdb_engine";
     owner = "Mause";
-    rev = "refs/tags/${version}";
-    hash = "sha256-tjyaV9DmiP2XrKxSCX2qKo7T7GNZtT3y5d1yQLdVuSE=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-UoTGFsno92iejBGvCsJ/jnhKJ41K9eTGwC7DomAp7IE=";
   };
 
   nativeBuildInputs = [ poetry-core ];
 
   propagatedBuildInputs = [ duckdb sqlalchemy ];
 
-  checkInputs = [ pytestCheckHook hypothesis ipython-sql ];
+  checkInputs = [ pytestCheckHook hypothesis ipython-sql typing-extensions ];
 
   pythonImportsCheck = [ "duckdb_engine" ];
 
diff --git a/pkgs/development/python-modules/dulwich/default.nix b/pkgs/development/python-modules/dulwich/default.nix
index 85b837d102eb5..d95fef43fad0b 100644
--- a/pkgs/development/python-modules/dulwich/default.nix
+++ b/pkgs/development/python-modules/dulwich/default.nix
@@ -17,7 +17,7 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.20.44";
+  version = "0.20.45";
   pname = "dulwich";
   format = "setuptools";
 
@@ -25,7 +25,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-EOjXN2PdMMhqmaFa3ov886uP6WUyzfSX6MsdEYMjUrg=";
+    hash = "sha256-cHEN2coqRCGQx+UGiS2wdMMYrHYuIh91KbjONIAgQbc=";
   };
 
   LC_ALL = "en_US.UTF-8";
diff --git a/pkgs/development/python-modules/dvc-render/default.nix b/pkgs/development/python-modules/dvc-render/default.nix
index adb19cf85029d..4b4397029dac5 100644
--- a/pkgs/development/python-modules/dvc-render/default.nix
+++ b/pkgs/development/python-modules/dvc-render/default.nix
@@ -2,17 +2,18 @@
 , buildPythonPackage
 , fetchFromGitHub
 , funcy
+, matplotlib
+, tabulate
 , pytestCheckHook
 , pytest-mock
 , pytest-test-utils
 , pythonOlder
 , setuptools-scm
-, tabulate
 }:
 
 buildPythonPackage rec {
   pname = "dvc-render";
-  version = "0.0.7";
+  version = "0.0.8";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -21,7 +22,7 @@ buildPythonPackage rec {
     owner = "iterative";
     repo = pname;
     rev = "refs/tags/${version}";
-    hash = "sha256-QUrXUfvxQ2XZPTWXXuYBJpzFGNb8KeqpMh47WdCQu04=";
+    hash = "sha256-pn1dmCyDxbMgXwUj9o//X3FZ/x0jz5ZKdTcEuKkeJ1s=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
@@ -30,16 +31,24 @@ buildPythonPackage rec {
     setuptools-scm
   ];
 
-  propagatedBuildInputs = [
-    funcy
-    tabulate
-  ];
+  passthru.optional-dependencies = {
+    table = [
+      tabulate
+    ];
+    markdown = [
+      tabulate
+      matplotlib
+    ];
+  };
 
   checkInputs = [
+    funcy
     pytestCheckHook
     pytest-mock
     pytest-test-utils
-  ];
+  ]
+  ++ passthru.optional-dependencies.table
+  ++ passthru.optional-dependencies.markdown;
 
   pythonImportsCheck = [
     "dvc_render"
@@ -47,7 +56,7 @@ buildPythonPackage rec {
 
   meta = with lib; {
     description = "Library for rendering DVC plots";
-    homepage = "https://github.com/iterative/dvclive";
+    homepage = "https://github.com/iterative/dvc-render";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/dynalite-devices/default.nix b/pkgs/development/python-modules/dynalite-devices/default.nix
index 3ee79ae448049..456e0a6a628d2 100644
--- a/pkgs/development/python-modules/dynalite-devices/default.nix
+++ b/pkgs/development/python-modules/dynalite-devices/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "dynalite-devices";
-  version = "0.46";
+  version = "0.47";
 
   src = fetchFromGitHub {
     owner = "ziv1234";
     repo = "python-dynalite-devices";
-    rev = "v${version}"; # https://github.com/ziv1234/python-dynalite-devices/issues/2
-    hash = "sha256-Fju2JpFkQBCbOln7r3L+crv82TI2SkdPJ1oaK7PEifo=";
+    rev = "refs/tags/v${version}"; # https://github.com/ziv1234/python-dynalite-devices/issues/2
+    hash = "sha256-kJo4e5vhgWzijLUhQd9VBVk1URpg9SXhOA60dJYashM=";
   };
 
   postPatch = ''
@@ -27,6 +27,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   pythonImportsCheck = [ "dynalite_devices_lib" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/ecdsa/default.nix b/pkgs/development/python-modules/ecdsa/default.nix
index 15d034bae406d..ce3d5bd4ce661 100644
--- a/pkgs/development/python-modules/ecdsa/default.nix
+++ b/pkgs/development/python-modules/ecdsa/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "ecdsa";
-  version = "0.17.0";
+  version = "0.18.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b9f500bb439e4153d0330610f5d26baaf18d17b8ced1bc54410d189385ea68aa";
+    sha256 = "sha256-GQNIBBVZ4hsiodZc7khSgsoRpvgdUD/duE1QF+ntHkk=";
   };
 
   propagatedBuildInputs = [ six ];
diff --git a/pkgs/development/python-modules/email-validator/default.nix b/pkgs/development/python-modules/email-validator/default.nix
index bdd830810fb38..cb553c4fd5f6a 100644
--- a/pkgs/development/python-modules/email-validator/default.nix
+++ b/pkgs/development/python-modules/email-validator/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "email-validator";
-  version = "1.1.3";
+  version = "1.2.1";
 
   src = fetchFromGitHub {
     owner = "JoshData";
     repo = "python-${pname}";
-    rev = "v${version}";
-    sha256 = "19n6p75m96kwg38bpfsa7ksj26aki02p5pr5f36q8wv3af84s61c";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-Avsqaev3LMoymU06y+u8MMv38ZI2cWk5tc/MkO+9oyA=";
   };
 
   propagatedBuildInputs = [
@@ -32,6 +32,7 @@ buildPythonPackage rec {
     "test_deliverability_found"
     "test_deliverability_fails"
     "test_deliverability_dns_timeout"
+    "test_email_example_reserved_domain"
     "test_main_single_good_input"
     "test_main_multi_input"
     "test_main_input_shim"
diff --git a/pkgs/development/python-modules/emoji/default.nix b/pkgs/development/python-modules/emoji/default.nix
index 84a709ac5392a..ce1a57bc33ab2 100644
--- a/pkgs/development/python-modules/emoji/default.nix
+++ b/pkgs/development/python-modules/emoji/default.nix
@@ -6,13 +6,13 @@
 
 buildPythonPackage rec {
   pname = "emoji";
-  version = "1.7.0";
+  version = "2.0.0";
 
   src = fetchFromGitHub {
     owner = "carpedm20";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-vKQ51RP7uy57vP3dOnHZRSp/Wz+YDzeLUR8JnIELE/I=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-8Wm0yqCnscUc5da4c2hLOQsFMcr3XVe8FArX9wllo8Q=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/enrich/default.nix b/pkgs/development/python-modules/enrich/default.nix
index fbd22a42b5556..d4b08af212d32 100644
--- a/pkgs/development/python-modules/enrich/default.nix
+++ b/pkgs/development/python-modules/enrich/default.nix
@@ -15,6 +15,11 @@ buildPythonPackage rec {
 
   checkInputs = [ pytestCheckHook pytest-mock ];
 
+  disabledTests = [
+    # console output order is racy
+    "test_rich_console_ex"
+  ];
+
   pythonImportsCheck = [ "enrich" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/epson-projector/default.nix b/pkgs/development/python-modules/epson-projector/default.nix
index 756472222d8e6..7dbe665ede8e0 100644
--- a/pkgs/development/python-modules/epson-projector/default.nix
+++ b/pkgs/development/python-modules/epson-projector/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "epson-projector";
-  version = "0.4.2";
+  version = "0.4.6";
 
   src = fetchPypi {
     pname = "epson_projector";
     inherit version;
-    sha256 = "4ade1c7a0f7008d23b08bd886c8790c44cf7d60453d1eb5a8077c92aaf790d30";
+    sha256 = "sha256-F8Dvk5OtlPbFyIedJb+zM2iN9eT0jDQEs06xbL3rlVs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/eradicate/default.nix b/pkgs/development/python-modules/eradicate/default.nix
index 45f0599ea2d71..757dad33c0963 100644
--- a/pkgs/development/python-modules/eradicate/default.nix
+++ b/pkgs/development/python-modules/eradicate/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "eradicate";
-  version = "2.0.0";
+  version = "2.1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "27434596f2c5314cc9b31410c93d8f7e8885747399773cd088d3adea647a60c8";
+    sha256 = "sha256-qsc4SrJbG/IcTAEt6bS/g5iUWhTJjJEVRbLqUKtVgBQ=";
   };
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/eth-abi/default.nix b/pkgs/development/python-modules/eth-abi/default.nix
index 1e81450764f0b..7bf0f9b49710a 100644
--- a/pkgs/development/python-modules/eth-abi/default.nix
+++ b/pkgs/development/python-modules/eth-abi/default.nix
@@ -42,6 +42,7 @@ buildPythonPackage rec {
     # boolean list representation changed
     "test_get_abi_strategy_returns_certain_strategies_for_known_type_strings"
     # hypothesis.errors.Flaky
+    "test_base_equals_has_expected_behavior_for_parsable_types"
     "test_has_arrlist_has_expected_behavior_for_parsable_types"
     "test_is_base_tuple_has_expected_behavior_for_parsable_types"
   ];
diff --git a/pkgs/development/python-modules/exifread/default.nix b/pkgs/development/python-modules/exifread/default.nix
index 16c5441803ea9..1e4ba3c17695d 100644
--- a/pkgs/development/python-modules/exifread/default.nix
+++ b/pkgs/development/python-modules/exifread/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "ExifRead";
-  version = "2.3.2";
+  version = "3.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a0f74af5040168d3883bbc980efe26d06c89f026dc86ba28eb34107662d51766";
+    sha256 = "sha256-CsWjZBadvfK9YvlPXAc5cKtmlKMWYXf15EixDJQ+LKQ=";
   };
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/factory_boy/default.nix b/pkgs/development/python-modules/factory_boy/default.nix
index 1c612e2b57ecf..407083e4f691c 100644
--- a/pkgs/development/python-modules/factory_boy/default.nix
+++ b/pkgs/development/python-modules/factory_boy/default.nix
@@ -4,7 +4,7 @@
 , faker
 , fetchPypi
 , flask
-, flask_sqlalchemy
+, flask-sqlalchemy
 , mongoengine
 , pytestCheckHook
 , sqlalchemy
@@ -28,7 +28,7 @@ buildPythonPackage rec {
   checkInputs = [
     django
     flask
-    flask_sqlalchemy
+    flask-sqlalchemy
     mongoengine
     pytestCheckHook
     sqlalchemy
diff --git a/pkgs/development/python-modules/faker/default.nix b/pkgs/development/python-modules/faker/default.nix
index 7ca49a4843429..a464d0372b51e 100644
--- a/pkgs/development/python-modules/faker/default.nix
+++ b/pkgs/development/python-modules/faker/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "faker";
-  version = "13.3.4";
+  version = "13.15.0";
 
   src = fetchPypi {
     pname = "Faker";
     inherit version;
-    hash = "sha256-GIlhBl+1x46mOfQhdvVRAPcskMOjF5rGyVXEvXErBRE=";
+    hash = "sha256-oSb6ZvVOZaZ/kT3MaYydAj3vcneIJTa94paPyscBv9U=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/fakeredis/default.nix b/pkgs/development/python-modules/fakeredis/default.nix
index 02f0d49279511..fae0141b85366 100644
--- a/pkgs/development/python-modules/fakeredis/default.nix
+++ b/pkgs/development/python-modules/fakeredis/default.nix
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "dsoftwareinc";
     repo = "fakeredis-py";
     rev = "refs/tags/v${version}";
-    hash = "sha256-gmQuQIlpE4PdgZ1J5aucSQkJpfrh1qTJNLfyI+cMCJU=";
+    hash = "sha256-IGrWHlWkydGyyQAvagvhzd2vcLQwTZHoasrMC9M/smw=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/filetype/default.nix b/pkgs/development/python-modules/filetype/default.nix
index 1a85a61f64262..0feaa5595f905 100644
--- a/pkgs/development/python-modules/filetype/default.nix
+++ b/pkgs/development/python-modules/filetype/default.nix
@@ -7,14 +7,14 @@
 
 buildPythonPackage rec {
   pname = "filetype";
-  version = "1.0.13";
+  version = "1.1.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-ahBHYv6T11XJYqqWyz2TCkj5GgdhBHEmxe6tIVPjOwM=";
+    hash = "sha256-r+SgAClgH2bSObcmiAZcx8IZ3sHJJ5lPkLgl6eU9j5M=";
   };
 
   checkInputs = [
@@ -30,6 +30,8 @@ buildPythonPackage rec {
     "test_guess_memoryview"
     "test_guess_extension_memoryview"
     "test_guess_mime_memoryview"
+    # https://github.com/h2non/filetype.py/issues/128
+    "test_guess_zstd"
   ];
 
   disabledTestPaths = [
diff --git a/pkgs/development/python-modules/findpython/default.nix b/pkgs/development/python-modules/findpython/default.nix
index 6c4f5daf64860..46b2d93bf6b49 100644
--- a/pkgs/development/python-modules/findpython/default.nix
+++ b/pkgs/development/python-modules/findpython/default.nix
@@ -15,7 +15,7 @@
 
 let
   pname = "findpython";
-  version = "0.1.6";
+  version = "0.2.0";
 in
 buildPythonPackage {
   inherit pname version;
@@ -25,7 +25,7 @@ buildPythonPackage {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-n9YYXNy5a6pxCTCER++0k7LH8aj1aeEorxTXJrKmnhg=";
+    hash = "sha256-wgme4LcfwnFLZPaP0fQLwO5H9J3+lUf7ZNfLzAL+CHE=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/flask-admin/default.nix b/pkgs/development/python-modules/flask-admin/default.nix
index 75573c7a69d64..a3bc87c8d086f 100644
--- a/pkgs/development/python-modules/flask-admin/default.nix
+++ b/pkgs/development/python-modules/flask-admin/default.nix
@@ -6,7 +6,7 @@
 , enum34
 , fetchPypi
 , flask
-, flask_sqlalchemy
+, flask-sqlalchemy
 , flask-babelex
 , flask-mongoengine
 , geoalchemy2
@@ -46,7 +46,7 @@ buildPythonPackage rec {
     arrow
     colour
     email-validator
-    flask_sqlalchemy
+    flask-sqlalchemy
     flask-babelex
     flask-mongoengine
     geoalchemy2
diff --git a/pkgs/development/python-modules/flask-appbuilder/default.nix b/pkgs/development/python-modules/flask-appbuilder/default.nix
index 9b0e993b1eb34..e52ecfc6493de 100644
--- a/pkgs/development/python-modules/flask-appbuilder/default.nix
+++ b/pkgs/development/python-modules/flask-appbuilder/default.nix
@@ -10,7 +10,7 @@
 , flask-babel
 , flask_login
 , flask-openid
-, flask_sqlalchemy
+, flask-sqlalchemy
 , flask-wtf
 , flask-jwt-extended
 , jsonschema
@@ -27,7 +27,7 @@
 
 buildPythonPackage rec {
   pname = "flask-appbuilder";
-  version = "4.0.0";
+  version = "4.1.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -43,7 +43,7 @@ buildPythonPackage rec {
       # https://github.com/dpgaspar/Flask-AppBuilder/pull/1734
       name = "flask-appbuilder-wtf3.patch";
       url = "https://github.com/dpgaspar/Flask-AppBuilder/commit/bccb3d719cd3ceb872fe74a9ab304d74664fbf43.patch";
-      sha256 = "1rsci0ynb7y6k53j164faggjr2g6l5v78w7953qbxcy8f55sb2fv";
+      sha256 = "sha256-8NaTr0RcnsVik/AB4g8QL+FkcRlgkkASFe8fXIvFt/A=";
       excludes = [
         "requirements.txt"
         "setup.py"
@@ -61,7 +61,7 @@ buildPythonPackage rec {
     flask-babel
     flask_login
     flask-openid
-    flask_sqlalchemy
+    flask-sqlalchemy
     flask-wtf
     flask-jwt-extended
     jsonschema
diff --git a/pkgs/development/python-modules/flask-caching/default.nix b/pkgs/development/python-modules/flask-caching/default.nix
index 6e78841ab8c32..6a7f51e81fe6a 100644
--- a/pkgs/development/python-modules/flask-caching/default.nix
+++ b/pkgs/development/python-modules/flask-caching/default.nix
@@ -11,14 +11,20 @@
 
 buildPythonPackage rec {
   pname = "Flask-Caching";
-  version = "1.11.1";
+  version = "2.0.0";
+  format = "setuptools";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "28af189e97defb9e39b43ebe197b54a58aaee81bdeb759f46d969c26d7aa7810";
+    sha256 = "sha256-MwDvzNo1nWnODmgkuQy1cf+JWjkHwxJmwDQsykvEA0A=";
   };
 
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "Flask <= 2.1.2" "Flask <= 2.2"
+  '';
+
   propagatedBuildInputs = [
     cachelib
     flask
diff --git a/pkgs/development/python-modules/flask-migrate/default.nix b/pkgs/development/python-modules/flask-migrate/default.nix
index 9f70e129ae1a3..04532032038fc 100644
--- a/pkgs/development/python-modules/flask-migrate/default.nix
+++ b/pkgs/development/python-modules/flask-migrate/default.nix
@@ -5,7 +5,7 @@
 , alembic
 , flask
 , flask_script
-, flask_sqlalchemy
+, flask-sqlalchemy
 , python
 }:
 
@@ -25,7 +25,7 @@ buildPythonPackage rec {
   propagatedBuildInputs = [
     alembic
     flask
-    flask_sqlalchemy
+    flask-sqlalchemy
   ];
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/flask-security-too/default.nix b/pkgs/development/python-modules/flask-security-too/default.nix
index e1a598d3a0ba4..35216c6c03aa5 100644
--- a/pkgs/development/python-modules/flask-security-too/default.nix
+++ b/pkgs/development/python-modules/flask-security-too/default.nix
@@ -12,7 +12,7 @@
 , flask_mail
 
 # extras: fsqla
-, flask_sqlalchemy
+, flask-sqlalchemy
 , sqlalchemy
 , sqlalchemy-utils
 
@@ -74,7 +74,7 @@ buildPythonPackage rec {
       flask_mail
     ];
     fsqla = [
-      flask_sqlalchemy
+      flask-sqlalchemy
       sqlalchemy
       sqlalchemy-utils
     ];
diff --git a/pkgs/development/python-modules/flask-sqlalchemy/default.nix b/pkgs/development/python-modules/flask-sqlalchemy/default.nix
index 421bc95332b29..cd45e8ab12f8f 100644
--- a/pkgs/development/python-modules/flask-sqlalchemy/default.nix
+++ b/pkgs/development/python-modules/flask-sqlalchemy/default.nix
@@ -1,4 +1,11 @@
-{ lib, buildPythonPackage, fetchPypi, flask, mock, sqlalchemy, pytest }:
+{ lib
+, buildPythonPackage
+, fetchPypi
+, flask
+, mock
+, sqlalchemy
+, pytestCheckHook
+}:
 
 buildPythonPackage rec {
   pname = "Flask-SQLAlchemy";
@@ -9,12 +16,20 @@ buildPythonPackage rec {
     sha256 = "2bda44b43e7cacb15d4e05ff3cc1f8bc97936cc464623424102bfc2c35e95912";
   };
 
-  propagatedBuildInputs = [ flask sqlalchemy ];
-  checkInputs = [ mock pytest ];
+  propagatedBuildInputs = [
+    flask
+    sqlalchemy
+  ];
 
-  checkPhase = ''
-    pytest
-  '';
+  checkInputs = [
+    mock
+    pytestCheckHook
+  ];
+
+  disabledTests = [
+    # flaky
+    "test_session_scoping_changing"
+  ];
 
   meta = with lib; {
     description = "SQLAlchemy extension for Flask";
diff --git a/pkgs/development/python-modules/flask-swagger-ui/default.nix b/pkgs/development/python-modules/flask-swagger-ui/default.nix
index d238ba5acb752..e68f69e248e5d 100644
--- a/pkgs/development/python-modules/flask-swagger-ui/default.nix
+++ b/pkgs/development/python-modules/flask-swagger-ui/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "flask-swagger-ui";
-  version = "3.36.0";
+  version = "4.11.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f329752a65b2940ada8eeb57bce613f7c0a12856a9c31063bb9e33798554c9ed";
+    sha256 = "sha256-o3AZmngNZ4sy448b4Q1Nge+g7mPp/i+3Zv8aS2w32sg=";
   };
 
   doCheck = false;  # there are no tests
diff --git a/pkgs/development/python-modules/flask/default.nix b/pkgs/development/python-modules/flask/default.nix
index e4ded57576e57..760c3ee671ae7 100644
--- a/pkgs/development/python-modules/flask/default.nix
+++ b/pkgs/development/python-modules/flask/default.nix
@@ -13,12 +13,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "2.1.2";
-  pname = "Flask";
+  pname = "flask";
+  version = "2.1.3";
 
   src = fetchPypi {
-    inherit pname version;
-    sha256 = "sha256-MV3tLd+KYoFWftsnOTAQ/jQGGIuvv+ZaMznVeH2J5Hc=";
+    pname = "Flask";
+    inherit version;
+    sha256 = "sha256-FZcuUBffBXXD1sCQuhaLbbkCWeYgrI1+qBOjlrrVtss=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/flax/default.nix b/pkgs/development/python-modules/flax/default.nix
index 1cd68790479f2..5eda127fb1c0c 100644
--- a/pkgs/development/python-modules/flax/default.nix
+++ b/pkgs/development/python-modules/flax/default.nix
@@ -14,13 +14,13 @@
 
 buildPythonPackage rec {
   pname = "flax";
-  version = "0.4.1";
+  version = "0.5.2";
 
   src = fetchFromGitHub {
     owner = "google";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0j5ngdndm9nm49gcda7m36qzwk5lcbi4jnij9fi96vld54ip6f6v";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-t24JZ08EmvuAINZC26OQI1icklUhUkfz6ZRKPr2COAw=";
   };
 
   buildInputs = [ jaxlib ];
diff --git a/pkgs/development/python-modules/flower/default.nix b/pkgs/development/python-modules/flower/default.nix
index c8c9b7f4b19d4..14bb7ae6cb464 100644
--- a/pkgs/development/python-modules/flower/default.nix
+++ b/pkgs/development/python-modules/flower/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "flower";
-  version = "1.0.0";
+  version = "1.1.0";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1gcczr04g7wx99h7pxxx1p9n50sbyi0zxrzy7f7m0sf5apxw85rf";
+    sha256 = "sha256-+SDKKQLXU5/BgKsV5R8dkYNV5cwj2oVP+dWcbloXJbY=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/fontmake/default.nix b/pkgs/development/python-modules/fontmake/default.nix
index a075d64406ee5..87fc01f83df96 100644
--- a/pkgs/development/python-modules/fontmake/default.nix
+++ b/pkgs/development/python-modules/fontmake/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "fontmake";
-  version = "3.3.0";
+  version = "3.4.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-lD7MvZdr9CeWdoZtD3+8stVJTeQN5/AQ4miA/I2TFoE=";
+    sha256 = "sha256-g/JTmYE078qAFcTVCumVvGj65LbnDsCIUsFfqVlihTk=";
     extension = "zip";
   };
 
diff --git a/pkgs/development/python-modules/fonttools/default.nix b/pkgs/development/python-modules/fonttools/default.nix
index 88789f6b57f34..cfcabbddc2898 100644
--- a/pkgs/development/python-modules/fonttools/default.nix
+++ b/pkgs/development/python-modules/fonttools/default.nix
@@ -24,15 +24,15 @@
 
 buildPythonPackage rec {
   pname = "fonttools";
-  version = "4.33.3";
+  version = "4.34.4";
 
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner  = pname;
     repo   = pname;
-    rev    = version;
-    sha256 = "MUIZGnYwlfTat9655AOYgK5r6AvHj/xXghUvOZR8HIM=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-GwbcrDsfxs5qRQJozhK/+n3W3NlO39g7pzxL9iIiDfU=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/frozendict/default.nix b/pkgs/development/python-modules/frozendict/default.nix
index fe0c4b23354c8..d236a6e15e5b8 100644
--- a/pkgs/development/python-modules/frozendict/default.nix
+++ b/pkgs/development/python-modules/frozendict/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "frozendict";
-  version = "2.3.1";
+  version = "2.3.2";
   format = "setuptools";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-vJHGkjPrkWu268QJiLbYSXNXcCQO/JxgvkW0q5GcG94=";
+    sha256 = "sha256-f6xFQvChP75wTbSUL0G6Or/+xa+LEAAllz5Z3/agnQ0=";
   };
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/functorch/default.nix b/pkgs/development/python-modules/functorch/default.nix
index e7f4e29fe94a5..53860d2c2b493 100644
--- a/pkgs/development/python-modules/functorch/default.nix
+++ b/pkgs/development/python-modules/functorch/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "functorch";
-  version = "0.1.1";
+  version = "0.2.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "pytorch";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-FidM04Q3hkGEDr4dthJv0MWtGiRfnWxJoyzu7Wl3SD8=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-33skKk5aAIHn+1149ifolXPA+tpQ+WROAZvwPeGBbrA=";
   };
 
   # Somewhat surprisingly pytorch is actually necessary for the build process.
diff --git a/pkgs/development/python-modules/generic/default.nix b/pkgs/development/python-modules/generic/default.nix
index 87dca630a1b82..98e601140d49d 100644
--- a/pkgs/development/python-modules/generic/default.nix
+++ b/pkgs/development/python-modules/generic/default.nix
@@ -2,25 +2,30 @@
 , buildPythonPackage
 , pythonOlder
 , fetchPypi
+, exceptiongroup
 , poetry-core
 }:
 
 buildPythonPackage rec {
   pname = "generic";
-  version = "1.0.1";
+  version = "1.1.0";
   disabled = pythonOlder "3.7";
 
   format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ex93I+ofo5lP6qoolZwzjxSspeqJimY3vpB32RLJ00k=";
+    sha256 = "sha256-/947oEvZSD5mjRD9qcuzKAFativTmaeejXxQ322UD+A=";
   };
 
   nativeBuildInputs = [
     poetry-core
   ];
 
+  propagatedBuildInputs = [
+    exceptiongroup
+  ];
+
   pythonImportsCheck = [ "generic" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/geoalchemy2/default.nix b/pkgs/development/python-modules/geoalchemy2/default.nix
index 9260bb6e3c394..dc2b3dbd4de1e 100644
--- a/pkgs/development/python-modules/geoalchemy2/default.nix
+++ b/pkgs/development/python-modules/geoalchemy2/default.nix
@@ -5,18 +5,19 @@
 , setuptools-scm
 , shapely
 , sqlalchemy
+, alembic
 , psycopg2
 , pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "GeoAlchemy2";
-  version = "0.11.1";
+  version = "0.12.1";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-+SoPrdtbdDhNu/PHAAQzNYzo4HoYD+HWwoQ+qgQ3/wg=";
+    sha256 = "sha256-7566ebZ/9LxyCw4ZkUEIZvx9sBODewVaGyy2UYuZTYA=";
   };
 
   nativeBuildInputs = [
@@ -30,6 +31,7 @@ buildPythonPackage rec {
   ];
 
   checkInputs = [
+    alembic
     psycopg2
     pytestCheckHook
   ];
@@ -48,6 +50,7 @@ buildPythonPackage rec {
     "tests/gallery/test_type_decorator.py"
     "tests/test_functional.py"
     "tests/test_functional_postgresql.py"
+    "tests/test_alembic_migrations.py"
   ];
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/geographiclib/default.nix b/pkgs/development/python-modules/geographiclib/default.nix
index 0526a584a41b9..12a542af509d8 100644
--- a/pkgs/development/python-modules/geographiclib/default.nix
+++ b/pkgs/development/python-modules/geographiclib/default.nix
@@ -2,15 +2,17 @@
 , buildPythonPackage
 , fetchPypi
 , pytestCheckHook
+, pythonOlder
 }:
 
 buildPythonPackage rec {
   pname = "geographiclib";
-  version = "1.52";
+  version = "2.0";
+  disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-rEANZyuJVLAwa8qJCwiLuLoqdX3IEzzKC4ePNLM7J0A=";
+    sha256 = "sha256-9/Qchdw+HC09k17IZmDcOyyEjIPhf5qeUbqdUUahWFk=";
   };
 
   checkInputs = [
@@ -23,5 +25,6 @@ buildPythonPackage rec {
     homepage = "https://geographiclib.sourceforge.io";
     description = "Algorithms for geodesics (Karney, 2013) for solving the direct and inverse problems for an ellipsoid of revolution";
     license = licenses.mit;
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/development/python-modules/geopy/default.nix b/pkgs/development/python-modules/geopy/default.nix
index 6b05bb7228376..3ef58b9ec470c 100644
--- a/pkgs/development/python-modules/geopy/default.nix
+++ b/pkgs/development/python-modules/geopy/default.nix
@@ -1,16 +1,18 @@
 { lib
 , async_generator
 , buildPythonPackage
+, docutils
 , fetchFromGitHub
 , geographiclib
-, isPy3k
 , pytestCheckHook
+, pythonOlder
+, pytz
 }:
 
 buildPythonPackage rec {
   pname = "geopy";
   version = "2.2.0";
-  disabled = !isPy3k; # only Python 3
+  disabled = pythonOlder "3.5";
 
   src = fetchFromGitHub {
     owner = pname;
@@ -19,15 +21,29 @@ buildPythonPackage rec {
     sha256 = "sha256-zFz0T/M/CABKkChuiKsFkWj2pphZuFeE5gz0HxZYaz8=";
   };
 
-  propagatedBuildInputs = [ geographiclib ];
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "geographiclib<2,>=1.49" "geographiclib"
+  '';
+
+  propagatedBuildInputs = [
+    geographiclib
+  ];
 
   checkInputs = [
     async_generator
+    docutils
     pytestCheckHook
+    pytz
   ];
 
-  # Exclude tests which perform API calls
-  pytestFlagsArray = [ "--ignore test/geocoders/" ];
+  disabledTests = [
+    # ignore --skip-tests-requiring-internet flag
+    "test_user_agent_default"
+  ];
+
+  pytestFlagsArray = [ "--skip-tests-requiring-internet" ];
+
   pythonImportsCheck = [ "geopy" ];
 
   __darwinAllowLocalNetworking = true;
diff --git a/pkgs/development/python-modules/geventhttpclient/default.nix b/pkgs/development/python-modules/geventhttpclient/default.nix
index 4a349106ac3f9..50c8b60487ae3 100644
--- a/pkgs/development/python-modules/geventhttpclient/default.nix
+++ b/pkgs/development/python-modules/geventhttpclient/default.nix
@@ -8,18 +8,19 @@
 , pytestCheckHook
 , pythonOlder
 , six
+, urllib3
 }:
 
 buildPythonPackage rec {
   pname = "geventhttpclient";
-  version = "1.5.3";
+  version = "1.5.5";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-2A7J/0K3IZ8zVYGFSZ0LQ2VZf8Vf+IYge0X1Yy4Jl4A=";
+    hash = "sha256-H0+XP7n2r+TO7BOdXV2BmbVzM3Gm0uzAZeJXyBAgU5s=";
   };
 
   propagatedBuildInputs = [
@@ -32,10 +33,11 @@ buildPythonPackage rec {
   checkInputs = [
     dpkt
     pytestCheckHook
+    urllib3
   ];
 
   disabledTests = [
-    # socket.gaierror: [Errno -2] Name or service not known
+    # socket.gaierror: [Errno -3] Temporary failure in name resolution
     "test_client_simple"
     "test_client_without_leading_slas"
     "test_request_with_headers"
@@ -50,8 +52,8 @@ buildPythonPackage rec {
   ];
 
   meta = with lib; {
-    homepage = "https://github.com/gwik/geventhttpclient";
-    description = "HTTP client library for gevent";
+    homepage = "https://github.com/geventhttpclient/geventhttpclient";
+    description = "High performance, concurrent HTTP client library using gevent";
     license = licenses.mit;
     maintainers = with maintainers; [ koral ];
   };
diff --git a/pkgs/development/python-modules/gigalixir/default.nix b/pkgs/development/python-modules/gigalixir/default.nix
index 68283546e5446..ab05ccfc3b303 100644
--- a/pkgs/development/python-modules/gigalixir/default.nix
+++ b/pkgs/development/python-modules/gigalixir/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonApplication rec {
   pname = "gigalixir";
-  version = "1.2.5";
+  version = "1.2.6";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-P70xsI/zwsoSgK1XCPzJSI5NQ58M431kmgo5gHXbaNw=";
+    hash = "sha256-a2kU5vUSiOg0yFvGLxE2Edgyrar7psBD4NPEmDsP3IY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/glean-parser/default.nix b/pkgs/development/python-modules/glean-parser/default.nix
index 535fd97507483..9f80204e73603 100644
--- a/pkgs/development/python-modules/glean-parser/default.nix
+++ b/pkgs/development/python-modules/glean-parser/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "glean-parser";
-  version = "5.1.2";
+  version = "6.1.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -23,13 +23,13 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "glean_parser";
     inherit version;
-    hash = "sha256-PjOMNUnrz0kDfYEXv5Ni/9RIHn4Yylle6NJOK1Rb3SY=";
+    hash = "sha256-vEGleqQytNYyy/DfHwqxrHIOMCj4sZTavfuxyDc5O30=";
   };
 
   postPatch = ''
     substituteInPlace setup.py \
       --replace "pytest-runner" "" \
-      --replace "MarkupSafe==2.0.1" "MarkupSafe"
+      --replace "MarkupSafe>=1.1.1,<=2.0.1" "MarkupSafe>=1.1.1"
   '';
 
   nativeBuildInputs = [
@@ -50,9 +50,15 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  preCheck = ''
+    export HOME=$TMPDIR
+  '';
+
   disabledTests = [
-    # https://bugzilla.mozilla.org/show_bug.cgi?id=1741668
+    # Network access
     "test_validate_ping"
+    # Fails since yamllint 1.27.x
+    "test_yaml_lint"
   ];
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/glean-sdk/default.nix b/pkgs/development/python-modules/glean-sdk/default.nix
index 2f569758b4ac4..c363d2150db2e 100644
--- a/pkgs/development/python-modules/glean-sdk/default.nix
+++ b/pkgs/development/python-modules/glean-sdk/default.nix
@@ -16,19 +16,19 @@
 
 buildPythonPackage rec {
   pname = "glean-sdk";
-  version = "44.0.0";
+  version = "50.1.2";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-gzLsBwq3wrFde5cEb5+oFLW4KrwoiZpr22JbJhNr1yk=";
+    hash = "sha256-avTIinFBSoCHeCiX7EoS4ucBK6FyFC1SuAFpSdxwPUk=";
   };
 
   cargoDeps = rustPlatform.fetchCargoTarball {
     inherit src;
     name = "${pname}-${version}";
-    sha256 = "sha256-lWFv8eiA3QHp5bhcg4qon/dvKUbFbtH1Q2oXGkk0Me0=";
+    hash = "sha256:10k8684665iawf1yswx39s4cj6c5d37j4d7jgbn0fcm08qlkfzxi";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/glyphslib/default.nix b/pkgs/development/python-modules/glyphslib/default.nix
index 2d6b19bea35d7..d4748b6b119a0 100644
--- a/pkgs/development/python-modules/glyphslib/default.nix
+++ b/pkgs/development/python-modules/glyphslib/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "glyphslib";
-  version = "6.0.4";
+  version = "6.0.6";
 
   format = "pyproject";
 
   src = fetchPypi {
     pname = "glyphsLib";
     inherit version;
-    sha256 = "sha256-PT66n1WEO5FNcwov8GaXT1YNrAi22X4HN7iVNkuehKI=";
+    sha256 = "sha256-F4ev+o6vwDjV2H3z+DrwQZ7VLc1cSIjCWhgY7pcse1M=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/goobook/default.nix b/pkgs/development/python-modules/goobook/default.nix
index 42e2b84783f5c..e196f0ec09d8d 100644
--- a/pkgs/development/python-modules/goobook/default.nix
+++ b/pkgs/development/python-modules/goobook/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "goobook";
-  version = "3.5.1";
+  version = "3.5.2";
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6e69aeaf69112d116302f0c42ca1904f3b6efd17f15cefc12c866206160293be";
+    sha256 = "sha256-i24Hh10iXFUiWVgokMs7f8ZpIVN/ZEF421tfa2ByQ4c=";
   };
 
   nativeBuildInputs = [ docutils installShellFiles ];
diff --git a/pkgs/development/python-modules/google-api-core/default.nix b/pkgs/development/python-modules/google-api-core/default.nix
index 6fc435be49922..50b58e5a3f157 100644
--- a/pkgs/development/python-modules/google-api-core/default.nix
+++ b/pkgs/development/python-modules/google-api-core/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "google-api-core";
-  version = "2.8.1";
+  version = "2.8.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-lYAkxqo0YLCPNXQSMQdqTdmkyBmmo51E2pYn/r6LKPA=";
+    sha256 = "sha256-BvckTGQDIrUIsSWQO7VwG+urzogy+Fq6kzXsALPQLtw=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/google-api-python-client/default.nix b/pkgs/development/python-modules/google-api-python-client/default.nix
index bce1897eac565..1997d88821b37 100644
--- a/pkgs/development/python-modules/google-api-python-client/default.nix
+++ b/pkgs/development/python-modules/google-api-python-client/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "google-api-python-client";
-  version = "2.42.0";
+  version = "2.53.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-e/WLZltjXQattHeXqaT3NILnOeAu0DbNlg3HwYM2H2c=";
+    sha256 = "sha256-kEs9aH4otT9N3iNrReRDxjh+FzYU6ZGD3FuKzb03DRg=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/google-auth-oauthlib/default.nix b/pkgs/development/python-modules/google-auth-oauthlib/default.nix
index 449a07ea40cbd..d5e7848b3e466 100644
--- a/pkgs/development/python-modules/google-auth-oauthlib/default.nix
+++ b/pkgs/development/python-modules/google-auth-oauthlib/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "google-auth-oauthlib";
-  version = "0.5.1";
+  version = "0.5.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-MFlrgk/GgI/ayi8EjkmYzED7SzWZ6upm0o3HCFs2xbg=";
+    sha256 = "sha256-1emKcSAzMGmfkqJrwIhHqS6MOxuNgqAh8a80Fk2xQ64=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/google-auth/default.nix b/pkgs/development/python-modules/google-auth/default.nix
index d228e40e1a003..f1aba037ee01e 100644
--- a/pkgs/development/python-modules/google-auth/default.nix
+++ b/pkgs/development/python-modules/google-auth/default.nix
@@ -2,46 +2,78 @@
 , lib
 , buildPythonPackage
 , fetchPypi
-, pytestCheckHook
 , cachetools
+, pyasn1-modules
+, rsa
+, six
+, aiohttp
 , cryptography
+, pyopenssl
+, pyu2f
+, requests
+, aioresponses
+, asynctest
 , flask
 , freezegun
+, grpcio
 , mock
 , oauth2client
-, pyasn1-modules
-, pyu2f
+, pytest-asyncio
 , pytest-localserver
+, pytestCheckHook
 , responses
-, rsa
+, urllib3
 }:
 
 buildPythonPackage rec {
   pname = "google-auth";
-  version = "2.6.6";
+  version = "2.9.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-G6STjgMrc961HlnEZWoA4JOc8LERJXUJnxNrq7RWMxI=";
+    sha256 = "sha256-FCkvo0KfK7HpmGJVTN4e5zDWhA664GeBTT0V2FScCIg=";
   };
 
   propagatedBuildInputs = [
     cachetools
     pyasn1-modules
     rsa
-    pyu2f
+    six
   ];
 
+  passthru.optional-dependencies = {
+    aiohttp = [
+      aiohttp
+      requests
+    ];
+    enterprise_cert = [
+      cryptography
+      pyopenssl
+    ];
+    pyopenssl = [
+      pyopenssl
+    ];
+    reauth = [
+      pyu2f
+    ];
+  };
+
   checkInputs = [
-    cryptography
+    aioresponses
+    asynctest
     flask
     freezegun
+    grpcio
     mock
     oauth2client
-    pytestCheckHook
+    pytest-asyncio
     pytest-localserver
+    pytestCheckHook
     responses
-  ];
+    urllib3
+  ] ++ passthru.optional-dependencies.aiohttp
+  ++ passthru.optional-dependencies.enterprise_cert
+  ++ passthru.optional-dependencies.reauth;
 
   pythonImportsCheck = [
     "google.auth"
diff --git a/pkgs/development/python-modules/google-cloud-bigquery/default.nix b/pkgs/development/python-modules/google-cloud-bigquery/default.nix
index 94cebca1a0acc..27db85ab488c1 100644
--- a/pkgs/development/python-modules/google-cloud-bigquery/default.nix
+++ b/pkgs/development/python-modules/google-cloud-bigquery/default.nix
@@ -21,12 +21,12 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-bigquery";
-  version = "3.1.0";
+  version = "3.2.0";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-0tbK940cEz5//ZsLfi198fmy9wPeN3SXuW2adM/o7AI=";
+    sha256 = "sha256-l/tDBuMky4aQnOMqmUToHSH7yyingMXN8BtuTUfUwyI=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/google-cloud-core/default.nix b/pkgs/development/python-modules/google-cloud-core/default.nix
index c446c7a6d2ea0..54dd6cb837a31 100644
--- a/pkgs/development/python-modules/google-cloud-core/default.nix
+++ b/pkgs/development/python-modules/google-cloud-core/default.nix
@@ -8,11 +8,11 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-core";
-  version = "2.3.0";
+  version = "2.3.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-/apinmF0tBd8LVbrirHd2HZhBk0KPpuwa2Lk1+I0Rmk=";
+    sha256 = "sha256-NDNDWcsEGHvcgN3PYT5GLf16Oqu8P+TRGFF6tLkwPVM=";
   };
 
   propagatedBuildInputs = [ google-api-core ];
diff --git a/pkgs/development/python-modules/google-cloud-datastore/default.nix b/pkgs/development/python-modules/google-cloud-datastore/default.nix
index d521bbd2cabc8..133a593002156 100644
--- a/pkgs/development/python-modules/google-cloud-datastore/default.nix
+++ b/pkgs/development/python-modules/google-cloud-datastore/default.nix
@@ -13,11 +13,11 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-datastore";
-  version = "2.7.2";
+  version = "2.8.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-8o6OeewuiptrlkVNm2I7fwtqPAt+nNOHveIUEWDjyN0=";
+    sha256 = "sha256-/zqsy+xrgmjsSrybBpwCfphTGGVp2AOp+ANsYPSrVfA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/google-cloud-iam/default.nix b/pkgs/development/python-modules/google-cloud-iam/default.nix
index c1d6152297fb9..bf2af25a42bde 100644
--- a/pkgs/development/python-modules/google-cloud-iam/default.nix
+++ b/pkgs/development/python-modules/google-cloud-iam/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-iam";
-  version = "2.6.2";
+  version = "2.8.0";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-IOl5ZWekpiikOOMQ/afryiP+0lPLt4idSmVARRJj8LE=";
+    sha256 = "sha256-3SBQKRr/dpNqksC7wLNCz4Oda/i90BAZLcxN9oMYOsA=";
   };
 
   propagatedBuildInputs = [ google-api-core libcst proto-plus ];
diff --git a/pkgs/development/python-modules/google-cloud-kms/default.nix b/pkgs/development/python-modules/google-cloud-kms/default.nix
index 6a55519f79e96..0d6732392a10b 100644
--- a/pkgs/development/python-modules/google-cloud-kms/default.nix
+++ b/pkgs/development/python-modules/google-cloud-kms/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-kms";
-  version = "2.11.2";
+  version = "2.12.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-X95xD/L18dXPYxCbvxIPjaOolMSDr7vpyQnzb5oMFEQ=";
+    sha256 = "sha256-ySlCL0Ukppob6Iuu2+fVQjPDsAnmK1Yvbd2I8+DVylk=";
   };
 
   propagatedBuildInputs = [ grpc-google-iam-v1 google-api-core libcst proto-plus ];
diff --git a/pkgs/development/python-modules/google-cloud-testutils/default.nix b/pkgs/development/python-modules/google-cloud-testutils/default.nix
index c5d02926f507f..c2bd3f0a14661 100644
--- a/pkgs/development/python-modules/google-cloud-testutils/default.nix
+++ b/pkgs/development/python-modules/google-cloud-testutils/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-testutils";
-  version = "1.3.1";
+  version = "1.3.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-X85NRgGZt7+OpL4poOyS+UWec4fuABiTxEYyFpkUpqs=";
+    sha256 = "sha256-bRjvNNmvsBy0sR4C0DoC/n7A9ez6AfXUJrXZiHKkz0g=";
   };
 
   propagatedBuildInputs = [ click google-auth packaging six ];
diff --git a/pkgs/development/python-modules/googleapis-common-protos/default.nix b/pkgs/development/python-modules/googleapis-common-protos/default.nix
index 2cb706bc02dd2..2c35387b124de 100644
--- a/pkgs/development/python-modules/googleapis-common-protos/default.nix
+++ b/pkgs/development/python-modules/googleapis-common-protos/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "googleapis-common-protos";
-  version = "1.56.2";
+  version = "1.56.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-sJtW9UYwcMIVN1PvEj8H0uSSNeiRSOmyRZ7I7S9o19M=";
+    sha256 = "sha256-wlhzxHJ5OHz9y9r6NhSYh5AdNiAstkWg5PKWhr9uRBc=";
   };
 
   propagatedBuildInputs = [ grpc protobuf ];
diff --git a/pkgs/development/python-modules/gql/default.nix b/pkgs/development/python-modules/gql/default.nix
index 679d0fbdb7cb2..0c8b2bd9378a0 100644
--- a/pkgs/development/python-modules/gql/default.nix
+++ b/pkgs/development/python-modules/gql/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "gql";
-  version = "3.1.0";
+  version = "3.4.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -28,8 +28,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "graphql-python";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-ZtrT+zeoP9KXdaCDKOUrjEwe7dN0+IwA20FDe5ja7l8=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-yr8IyAwZ6y2MPTe6bHRW+CIp19R3ZJWHuqdN5qultnQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/graphql-core/default.nix b/pkgs/development/python-modules/graphql-core/default.nix
index 75583cdbfe399..a5893d87c0cb4 100644
--- a/pkgs/development/python-modules/graphql-core/default.nix
+++ b/pkgs/development/python-modules/graphql-core/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "graphql-core";
-  version = "3.2.0";
+  version = "3.2.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -17,8 +17,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "graphql-python";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-71Z+5nVvg+aozJAKmBGJg5Gqq1OIVH7Xv33Q82IHhXg=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-LLvfjlio0UmTwR2ZRpsoKTJoWHOEk740QE6K+5GNlrk=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/green/default.nix b/pkgs/development/python-modules/green/default.nix
index ccff2f21e1f96..103bcd2a526c1 100644
--- a/pkgs/development/python-modules/green/default.nix
+++ b/pkgs/development/python-modules/green/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "green";
-  version = "3.4.1";
+  version = "3.4.2";
   format = "setuptools";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5dda2d2a277012227011f8f21523d70a550ebe5d47cc890fa16b9fcd9a91da53";
+    sha256 = "sha256-Jbmes0KDoYVbLzDJHSuNwB22ystzFBZkAXkce8CWwiE=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/gridnet/default.nix b/pkgs/development/python-modules/gridnet/default.nix
index 1288471c6b296..5c55b8c6c55f6 100644
--- a/pkgs/development/python-modules/gridnet/default.nix
+++ b/pkgs/development/python-modules/gridnet/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "gridnet";
-  version = "4.0.0";
+  version = "4.1.0";
 
   disabled = pythonOlder "3.9";
 
@@ -21,8 +21,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "klaasnicolaas";
     repo = "python-gridnet";
-    rev = "v${version}";
-    hash = "sha256-Ihs8qUx50tAUcRBsVArRhzoLcQUi1vbYh8sPyK75AEk=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-/UBZVbDRZMYHDrgifpYSTygAQTBiqgZ0tRGncE3GeT4=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/gruut/default.nix b/pkgs/development/python-modules/gruut/default.nix
index ccaf7b6f03898..f36c9daa12d86 100644
--- a/pkgs/development/python-modules/gruut/default.nix
+++ b/pkgs/development/python-modules/gruut/default.nix
@@ -36,14 +36,14 @@ let
 in
 buildPythonPackage rec {
   pname = "gruut";
-  version = "2.2.3";
+  version = "2.3.4";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "rhasspy";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-B5fPUW4YaMzDDXxncfrWwxGdUizuaxnPImNMf1ZZJ/I=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-DD7gnvH9T2R6E19+exWE7Si+XEpfh0Iy5FYbycjgzgM=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/gtimelog/default.nix b/pkgs/development/python-modules/gtimelog/default.nix
index 15a1ddbf0614b..5870f448db983 100644
--- a/pkgs/development/python-modules/gtimelog/default.nix
+++ b/pkgs/development/python-modules/gtimelog/default.nix
@@ -55,6 +55,5 @@ buildPythonPackage rec {
     homepage = "https://gtimelog.org/";
     license = licenses.gpl2Plus;
     maintainers = with maintainers; [ oxzi ];
-    platforms = platforms.unix;
   };
 }
diff --git a/pkgs/development/python-modules/h5py/default.nix b/pkgs/development/python-modules/h5py/default.nix
index 36b1322a88b31..cd78af010aae8 100644
--- a/pkgs/development/python-modules/h5py/default.nix
+++ b/pkgs/development/python-modules/h5py/default.nix
@@ -8,13 +8,13 @@ let
   mpi = hdf5.mpi;
   mpiSupport = hdf5.mpiSupport;
 in buildPythonPackage rec {
-  version = "3.6.0";
+  version = "3.7.0";
   pname = "h5py";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8752d2814a92aba4e2b2a5922d2782d0029102d99caaf3c201a566bc0b40db29";
+    sha256 = "sha256-P883iEODxdpkhGq1EBkHIAJ9ygdo3vNN2Ny2Wdvly/M=";
   };
 
   # avoid strict pinning of numpy
diff --git a/pkgs/development/python-modules/hap-python/default.nix b/pkgs/development/python-modules/hap-python/default.nix
index 63a2e941f0fa5..6756aae4d372f 100644
--- a/pkgs/development/python-modules/hap-python/default.nix
+++ b/pkgs/development/python-modules/hap-python/default.nix
@@ -1,11 +1,11 @@
 { lib
 , buildPythonPackage
 , base36
+, chacha20poly1305-reuseable
 , cryptography
-, curve25519-donna
-, ecdsa
 , fetchFromGitHub
 , h11
+, orjson
 , pyqrcode
 , pytest-asyncio
 , pytest-timeout
@@ -16,31 +16,36 @@
 
 buildPythonPackage rec {
   pname = "hap-python";
-  version = "4.4.0";
+  version = "4.5.0";
+  format = "setuptools";
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "ikalchev";
     repo = "HAP-python";
-    rev = "v${version}";
-    sha256 = "sha256-dSiI2W4U4FYwMRBInpxb/wkQLKxPzLHIkLPNgiZEhUA=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-/XJvCL9hMIrOUwGPcrvSrJ6SZ/E6BQy+isFFlAniIM4=";
   };
 
   propagatedBuildInputs = [
-    base36
+    chacha20poly1305-reuseable
     cryptography
-    curve25519-donna
-    ecdsa
     h11
-    pyqrcode
+    orjson
     zeroconf
   ];
 
+  passthru.optional-dependencies.QRCode = [
+    base36
+    pyqrcode
+  ];
+
   checkInputs = [
     pytest-asyncio
     pytest-timeout
     pytestCheckHook
-  ];
+  ]
+  ++ passthru.optional-dependencies.QRCode;
 
   disabledTestPaths = [
     # Disable tests requiring network access
diff --git a/pkgs/development/python-modules/hatch-vcs/default.nix b/pkgs/development/python-modules/hatch-vcs/default.nix
index 6e785d0c9a284..4f5c1f9bf3e69 100644
--- a/pkgs/development/python-modules/hatch-vcs/default.nix
+++ b/pkgs/development/python-modules/hatch-vcs/default.nix
@@ -35,6 +35,12 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  disabledTests = [
+    # incompatible with setuptools-scm>=7
+    # https://github.com/ofek/hatch-vcs/issues/8
+    "test_write"
+  ];
+
   pythonImportsCheck = [
     "hatch_vcs"
   ];
diff --git a/pkgs/development/python-modules/hatchling/default.nix b/pkgs/development/python-modules/hatchling/default.nix
index d2d212f5417f9..684703e6b7806 100644
--- a/pkgs/development/python-modules/hatchling/default.nix
+++ b/pkgs/development/python-modules/hatchling/default.nix
@@ -20,7 +20,7 @@
 
 let
   pname = "hatchling";
-  version = "1.0.0";
+  version = "1.5.0";
 in
 buildPythonPackage {
   inherit pname version;
@@ -28,7 +28,7 @@ buildPythonPackage {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d235a5fa8aff89e8d9d6d4033594aa4c3bc00ec5e31d3e80c153bfcf951b4f98";
+    sha256 = "sha256-nKQJpBFAzGYhZGgLeK3NO6d7I6lFmEvZlw0R/jjoajg=";
   };
 
   # listed in backend/src/hatchling/ouroboros.py
diff --git a/pkgs/development/python-modules/hiyapyco/default.nix b/pkgs/development/python-modules/hiyapyco/default.nix
index 79693747cfac3..5ecad96567836 100644
--- a/pkgs/development/python-modules/hiyapyco/default.nix
+++ b/pkgs/development/python-modules/hiyapyco/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "hiyapyco";
-  version = "0.4.16";
+  version = "0.5.0";
 
   src = fetchFromGitHub {
     owner = "zerwes";
     repo = pname;
-    rev = "release-${version}";
-    sha256 = "1ams9dp05yhgbg6255wrjgchl2mqg0s34d8b8prvql9lsh59s1fj";
+    rev = "refs/tags/release-${version}";
+    sha256 = "sha256-v+q7MOJvRc8rzBzwf27jmuIHpZeYGDK7VbzB98qnhrQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/homematicip/default.nix b/pkgs/development/python-modules/homematicip/default.nix
index 2330a356dd898..e8b107f805258 100644
--- a/pkgs/development/python-modules/homematicip/default.nix
+++ b/pkgs/development/python-modules/homematicip/default.nix
@@ -45,6 +45,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   disabledTests = [
     # Assert issues with datetime
     "test_contact_interface_device"
diff --git a/pkgs/development/python-modules/httpretty/default.nix b/pkgs/development/python-modules/httpretty/default.nix
index 67ece594071c8..a47d531e332ba 100644
--- a/pkgs/development/python-modules/httpretty/default.nix
+++ b/pkgs/development/python-modules/httpretty/default.nix
@@ -1,19 +1,11 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, tornado
-, requests
-, httplib2
 , sure
-, nose
-, nose-exclude
-, coverage
-, rednose
-, nose-randomly
 , six
-, mock
 , pytest
 , freezegun
+, pytestCheckHook
 }:
 
 buildPythonPackage rec {
@@ -31,25 +23,20 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ six ];
 
-  checkInputs = [ nose sure coverage mock rednose pytest
-    # Following not declared in setup.py
-    nose-randomly requests tornado httplib2 nose-exclude freezegun
+  checkInputs = [
+    sure
+    freezegun
+    pytestCheckHook
   ];
 
-  checkPhase = ''
-    nosetests tests/unit # functional tests cause trouble requiring /etc/protocol
-  '';
+  disabledTestPaths = [
+    "tests/bugfixes"
+    "tests/functional"
+    "tests/pyopenssl"
+  ];
 
   __darwinAllowLocalNetworking = true;
 
-  # Those flaky tests are failing intermittently on all platforms
-  NOSE_EXCLUDE = lib.concatStringsSep "," [
-    "tests.functional.test_httplib2.test_callback_response"
-    "tests.functional.test_requests.test_streaming_responses"
-    "tests.functional.test_httplib2.test_callback_response"
-    "tests.functional.test_requests.test_httpretty_should_allow_adding_and_overwritting_by_kwargs_u2"
-  ];
-
   meta = with lib; {
     homepage = "https://httpretty.readthedocs.org/";
     description = "HTTP client request mocking tool";
diff --git a/pkgs/development/python-modules/hydra/default.nix b/pkgs/development/python-modules/hydra/default.nix
index 362b0c51d0cc4..830118185bcb9 100644
--- a/pkgs/development/python-modules/hydra/default.nix
+++ b/pkgs/development/python-modules/hydra/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "hydra";
-  version = "1.1.1";
+  version = "1.2.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -20,8 +20,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "facebookresearch";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256:1svzysrjg47gb6lxx66fzd8wbhpbbsppprpbqssf5aqvhxgay3qk";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-4r0ZWW9SGl35Oupf0ejwL/s6Nas6RoSN2egiBrvFZIA=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/hypercorn/default.nix b/pkgs/development/python-modules/hypercorn/default.nix
index dc165f2b2cc48..35a9f8f6bb859 100644
--- a/pkgs/development/python-modules/hypercorn/default.nix
+++ b/pkgs/development/python-modules/hypercorn/default.nix
@@ -44,6 +44,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ] ++ lib.optionals (pythonOlder "3.8") [ mock ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   pythonImportsCheck = [ "hypercorn" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/hypothesis/default.nix b/pkgs/development/python-modules/hypothesis/default.nix
index c92b655fabd51..1e8afe9e543a9 100644
--- a/pkgs/development/python-modules/hypothesis/default.nix
+++ b/pkgs/development/python-modules/hypothesis/default.nix
@@ -1,8 +1,8 @@
 { lib
 , buildPythonPackage
-, pythonAtLeast
 , fetchFromGitHub
 , attrs
+, exceptiongroup
 , pexpect
 , doCheck ? true
 , pytestCheckHook
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "hypothesis";
-  version = "6.46.10";
+  version = "6.50.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "HypothesisWorks";
     repo = "hypothesis";
     rev = "hypothesis-python-${version}";
-    hash = "sha256-eQ7Ns0k1hOVw8/xiINMei6GbQqDHXrBl+1v8YQeFO9Q=";
+    hash = "sha256-G7OXlYaCPBfdXtmX/f/6i2LRCZZk5yvzhLc6sissuRo=";
   };
 
   postUnpack = "sourceRoot=$sourceRoot/hypothesis-python";
@@ -30,6 +30,8 @@ buildPythonPackage rec {
   propagatedBuildInputs = [
     attrs
     sortedcontainers
+  ] ++ lib.optionals (pythonOlder "3.11") [
+    exceptiongroup
   ];
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/hyrule/default.nix b/pkgs/development/python-modules/hyrule/default.nix
index 46ed096486b0f..201809d4538ca 100644
--- a/pkgs/development/python-modules/hyrule/default.nix
+++ b/pkgs/development/python-modules/hyrule/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "hyrule";
-  version = "0.1";
+  version = "0.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -16,8 +16,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "hylang";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-sqS5vOcbln+Vfv/Ji/8rJ4GTQpXIuhgf+MukjV0Kkuw=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-/YHgJq+C5+yc+44s76OR0WELUm8KHL2xxtJmGDTChCM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/ifaddr/default.nix b/pkgs/development/python-modules/ifaddr/default.nix
index 82b00d550950d..319b080c34724 100644
--- a/pkgs/development/python-modules/ifaddr/default.nix
+++ b/pkgs/development/python-modules/ifaddr/default.nix
@@ -5,12 +5,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.1.7";
+  version = "0.2.0";
   pname = "ifaddr";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1f9e8a6ca6f16db5a37d3356f07b6e52344f6f9f7e806d618537731669eb1a94";
+    sha256 = "sha256-zAy/yqv3ZdRFlYJfuWqZuxLHlxa3O0QzDqOO4rDErtQ=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/ignite/default.nix b/pkgs/development/python-modules/ignite/default.nix
index 897b5975c90cd..695dfb57832c4 100644
--- a/pkgs/development/python-modules/ignite/default.nix
+++ b/pkgs/development/python-modules/ignite/default.nix
@@ -14,13 +14,13 @@
 
 buildPythonPackage rec {
   pname = "ignite";
-  version = "0.4.8";
+  version = "0.4.9";
 
   src = fetchFromGitHub {
     owner = "pytorch";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-S4wL1RyQ6aDW16wbSl+86VhSJ2S9oanYhNtPQdBtdrA=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-KBEoMV9lwlEra4DiGDLgPb85+HrnK4Qiy3XYDa9hO3s=";
   };
 
   checkInputs = [ pytestCheckHook matplotlib mock pytest-xdist torchvision ];
diff --git a/pkgs/development/python-modules/ihatemoney/default.nix b/pkgs/development/python-modules/ihatemoney/default.nix
index bacaea2f2cb19..d6933c25ac47d 100644
--- a/pkgs/development/python-modules/ihatemoney/default.nix
+++ b/pkgs/development/python-modules/ihatemoney/default.nix
@@ -17,7 +17,6 @@
 , flask_mail
 , flask_migrate
 , flask-restful
-, flask_sqlalchemy
 , flask-talisman
 , flask-wtf
 , debts
diff --git a/pkgs/development/python-modules/imageio-ffmpeg/default.nix b/pkgs/development/python-modules/imageio-ffmpeg/default.nix
index 6998ff330afc5..2fa5f47d58379 100644
--- a/pkgs/development/python-modules/imageio-ffmpeg/default.nix
+++ b/pkgs/development/python-modules/imageio-ffmpeg/default.nix
@@ -9,13 +9,13 @@
 
 buildPythonPackage rec {
   pname = "imageio-ffmpeg";
-  version = "0.4.5";
+  version = "0.4.7";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f2ea4245a2adad25dedf98d343159579167e549ac8c4691cef5eff980e20c139";
+    sha256 = "sha256-egiDj5fzY+N8pBghuGT9P9yZqx/iQhBAx4619Wqecj4=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/imageio/default.nix b/pkgs/development/python-modules/imageio/default.nix
index 7c3fd87b4afdc..f657f73a7e418 100644
--- a/pkgs/development/python-modules/imageio/default.nix
+++ b/pkgs/development/python-modules/imageio/default.nix
@@ -16,11 +16,11 @@
 
 buildPythonPackage rec {
   pname = "imageio";
-  version = "2.19.2";
+  version = "2.19.3";
   disabled = isPy27;
 
   src = fetchPypi {
-    sha256 = "sha256-RuHnQSiDfSoevIdHa39zl4tpoSj6I4vJibYlqYGb2bM=";
+    sha256 = "sha256-DJ34DkLy7mi+qSAB5/z2EqoUmRDv4EDrdX9c4yMlCuE=";
     inherit pname version;
   };
 
diff --git a/pkgs/development/python-modules/imagesize/default.nix b/pkgs/development/python-modules/imagesize/default.nix
index 0fbe88a520fe1..0f06d36df4f27 100644
--- a/pkgs/development/python-modules/imagesize/default.nix
+++ b/pkgs/development/python-modules/imagesize/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "imagesize";
-  version = "1.3.0";
+  version = "1.4.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "cd1750d452385ca327479d45b64d9c7729ecf0b3969a58148298c77092261f9d";
+    sha256 = "sha256-aRUERK/7nLDVzFqSs2dvCy+3zZrjnpR6XhGja0SXzUo=";
   };
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/imbalanced-learn/default.nix b/pkgs/development/python-modules/imbalanced-learn/default.nix
index b1e5e91975228..8a53e856b3307 100644
--- a/pkgs/development/python-modules/imbalanced-learn/default.nix
+++ b/pkgs/development/python-modules/imbalanced-learn/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "imbalanced-learn";
-  version = "0.9.0";
+  version = "0.9.1";
   disabled = isPy27; # scikit-learn>=0.21 doesn't work on python2
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "836a4c137cc3c10310d4f6cd5ec34600ff488d7f8c243a997c3f9b551c91d0b2";
+    sha256 = "sha256-ThT3rmB4tauEO3PDebKsULIHRGQV2cJDjIhdbLWv2WI=";
   };
 
   propagatedBuildInputs = [ scikit-learn ];
diff --git a/pkgs/development/python-modules/imdbpy/default.nix b/pkgs/development/python-modules/imdbpy/default.nix
index ab4d2a5ce0c1c..f966a3f8d3c25 100644
--- a/pkgs/development/python-modules/imdbpy/default.nix
+++ b/pkgs/development/python-modules/imdbpy/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "imdbpy";
-  version = "2021.4.18";
+  version = "2022.7.9";
 
   src = fetchPypi {
     pname = "IMDbPY";
     inherit version;
-    sha256 = "af57f03638ba3b8ab3d696bfef0eeaf6414385c85f09260aba0a16b32174853f";
+    sha256 = "sha256-gKXt+KhxE/8ipE0A/XbUIsQs/uzU6oIL4zdTuPJL9OY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/importlib-metadata/default.nix b/pkgs/development/python-modules/importlib-metadata/default.nix
index 26612ff924e6d..9e4176a5b1ba0 100644
--- a/pkgs/development/python-modules/importlib-metadata/default.nix
+++ b/pkgs/development/python-modules/importlib-metadata/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "importlib-metadata";
-  version = "4.11.3";
+  version = "4.12.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "importlib_metadata";
     inherit version;
-    hash = "sha256-6kxZfr83FC+Ce485KZV54xaFwx06Q4tZ9GlAav0PJTk=";
+    hash = "sha256-Y3JFuLqytlAvy8dSzEt6b2JDuwKzHFwmFWrRA9PUVnA=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/importlib-resources/default.nix b/pkgs/development/python-modules/importlib-resources/default.nix
index 61fb5be068d38..2eb41c4c504d0 100644
--- a/pkgs/development/python-modules/importlib-resources/default.nix
+++ b/pkgs/development/python-modules/importlib-resources/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "importlib-resources";
-  version = "5.6.0";
+  version = "5.8.0";
   format = "pyproject";
   disabled = isPy27;
 
   src = fetchPypi {
     pname = "importlib_resources";
     inherit version;
-    sha256 = "sha256-G5MjjL8jtM3jQkDdgyHZnpvy60vJHAyZsohig+e6rYU=";
+    sha256 = "sha256-VoyfFssgT53syNbSSlcu7qJ9rLtM7p5rA6gCVzZ2l1E=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/inflect/default.nix b/pkgs/development/python-modules/inflect/default.nix
index a6c549b61f1b7..bb98c5bd679ff 100644
--- a/pkgs/development/python-modules/inflect/default.nix
+++ b/pkgs/development/python-modules/inflect/default.nix
@@ -8,12 +8,13 @@
 
 buildPythonPackage rec {
   pname = "inflect";
-  version = "5.4.0";
+  version = "5.6.2";
   disabled = isPy27;
+  format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-tY1YxOc//KmyXgdcHE/Jyt7LtcmdfNnzze3ac+zoPBw=";
+    sha256 = "sha256-qtx+1zko9eAUEpeUu6wDBYzKNdCpc6X8TrRcf6JgBfk=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/influxdb-client/default.nix b/pkgs/development/python-modules/influxdb-client/default.nix
index 226d43b2bc4c0..8442136e772ec 100644
--- a/pkgs/development/python-modules/influxdb-client/default.nix
+++ b/pkgs/development/python-modules/influxdb-client/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "influxdb-client";
-  version = "1.27.0";
+  version = "1.30.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -22,8 +22,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "influxdata";
     repo = "influxdb-client-python";
-    rev = "v${version}";
-    hash = "sha256-M0Ob3HjIhlYSIWXGM54NXiEMSCmZzNLLNsCRyxAcjMc=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-YGKFvRy76/klXhJ8Cdgqv9YqCq4E6XIiwWXl8W9fRX4=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/ipydatawidgets/default.nix b/pkgs/development/python-modules/ipydatawidgets/default.nix
index d74dbad18be68..6203d9a03ca87 100644
--- a/pkgs/development/python-modules/ipydatawidgets/default.nix
+++ b/pkgs/development/python-modules/ipydatawidgets/default.nix
@@ -14,13 +14,13 @@
 
 buildPythonPackage rec {
   pname = "ipydatawidgets";
-  version = "4.2.0";
+  version = "4.3.1.post1";
 
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d0e4b58b59b508165e8562b8f5d1dbfcd739855847ec0477bd9185a5e9b7c5bc";
+    sha256 = "sha256-aYGrzNmmupSuf2FuGBqabaPrFUM+VrtfFAQeXBEaJR8=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/ipykernel/default.nix b/pkgs/development/python-modules/ipykernel/default.nix
index d7302eaaecb2c..e3f981964b656 100644
--- a/pkgs/development/python-modules/ipykernel/default.nix
+++ b/pkgs/development/python-modules/ipykernel/default.nix
@@ -2,6 +2,7 @@
 , buildPythonPackage
 , callPackage
 , fetchPypi
+, hatchling
 , pythonOlder
 , ipython
 , jupyter-client
@@ -13,20 +14,25 @@
 
 buildPythonPackage rec {
   pname = "ipykernel";
-  version = "6.12.1";
+  version = "6.15.1";
+  format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-CGj1VhcpreREAR+Mp9NQLcnyf39E4g8dX+5+Hytxg6E=";
+    sha256 = "sha256-N6zDJUyqig2vzd3cjchjpgrRtGSHtoruNh2aFb2pgRI=";
   };
 
   # debugpy is optional, see https://github.com/ipython/ipykernel/pull/767
   postPatch = ''
-    sed -i "/debugpy/d" setup.py
+    sed -i "/debugpy/d" pyproject.toml
   '';
 
+  nativeBuildInputs = [
+    hatchling
+  ];
+
   propagatedBuildInputs = [
     ipython
     jupyter-client
diff --git a/pkgs/development/python-modules/ipyparallel/default.nix b/pkgs/development/python-modules/ipyparallel/default.nix
index b5d0b56bc061f..b4d5ab0745335 100644
--- a/pkgs/development/python-modules/ipyparallel/default.nix
+++ b/pkgs/development/python-modules/ipyparallel/default.nix
@@ -19,11 +19,11 @@
 
 buildPythonPackage rec {
   pname = "ipyparallel";
-  version = "8.2.1";
+  version = "8.4.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-8mdHPFL8aohsa4Fq2xVb7Asne8fSJPs/q+uDg05zPHI=";
+    sha256 = "sha256-Zwu+BXVTgXQuHqARd9xCj/jz6Urx8NVkLJ0Z83yoKJs=";
   };
 
   buildInputs = [ nose ];
diff --git a/pkgs/development/python-modules/ipywidgets/default.nix b/pkgs/development/python-modules/ipywidgets/default.nix
index 8894fbaf21ff3..62737e74785a7 100644
--- a/pkgs/development/python-modules/ipywidgets/default.nix
+++ b/pkgs/development/python-modules/ipywidgets/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "ipywidgets";
-  version = "7.7.0";
+  version = "7.7.1";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-q0pVloVaiLg3YZIcdocH1l5YRwaBObwXKd3+g0cDVCo=";
+    hash = "sha256-Xy+ht6+uGvMsiAiMmCitl43pPd2jk9ftQU5VP+6T3Ks=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/irc/default.nix b/pkgs/development/python-modules/irc/default.nix
index 15747d3f70d1c..88e7efbc230e4 100644
--- a/pkgs/development/python-modules/irc/default.nix
+++ b/pkgs/development/python-modules/irc/default.nix
@@ -5,20 +5,18 @@
 
 buildPythonPackage rec {
   pname = "irc";
-  version = "20.0.0";
+  version = "20.1.0";
+  format = "pyproject";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "59acb8d69d61a0cbd290e77e6ff10a8c7f2201fb8c7b7d5a195b5883d0c40b0a";
+    sha256 = "sha256-tvc3ky3UeR87GOMZ3nt9rwLSKFpr6iY9EB9NjlU4B+w=";
   };
 
-  doCheck = false;
-
-  pythonImportsCheck = [ "irc" ];
-
   nativeBuildInputs = [ setuptools-scm ];
+
   propagatedBuildInputs = [
     six
     importlib-metadata
@@ -30,10 +28,14 @@ buildPythonPackage rec {
     jaraco_collections
   ];
 
+  doCheck = false;
+
+  pythonImportsCheck = [ "irc" ];
+
   meta = with lib; {
     description = "IRC (Internet Relay Chat) protocol library for Python";
     homepage = "https://github.com/jaraco/irc";
     license = licenses.mit;
-    maintainers = [];
+    maintainers = with maintainers; [];
   };
 }
diff --git a/pkgs/development/python-modules/islpy/default.nix b/pkgs/development/python-modules/islpy/default.nix
index 41383a8f94bc6..aa084783fa8f7 100644
--- a/pkgs/development/python-modules/islpy/default.nix
+++ b/pkgs/development/python-modules/islpy/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "islpy";
-  version = "2022.2";
+  version = "2022.2.1";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-a6fnFBt//yrkQkLoVBnxr7OkJTG7PJalz/CF7lhxVA8=";
+    sha256 = "07062ljvznm2dg3r9b3lq98qygxsha8ylxi4zs7hx49l0jw2vbjy";
   };
 
   postConfigure = ''
diff --git a/pkgs/development/python-modules/iterm2/default.nix b/pkgs/development/python-modules/iterm2/default.nix
index 1742fc08e1e49..96c8fcfb3c14d 100644
--- a/pkgs/development/python-modules/iterm2/default.nix
+++ b/pkgs/development/python-modules/iterm2/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "iterm2";
-  version = "2.1";
+  version = "2.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-oEXDW+ar3S0gJn2DdaOyq6GDE9dJaghQEpPBCfTL2Kw=";
+    sha256 = "sha256-rKvnr0C48mTkjbGyHhvNzgJ97p5mJ7F4wU8ZMPYV/rM=";
   };
 
   propagatedBuildInputs = [ protobuf websockets ];
diff --git a/pkgs/development/python-modules/jaraco-context/default.nix b/pkgs/development/python-modules/jaraco-context/default.nix
index 7be059359259d..4b097fd5b0961 100644
--- a/pkgs/development/python-modules/jaraco-context/default.nix
+++ b/pkgs/development/python-modules/jaraco-context/default.nix
@@ -7,16 +7,16 @@
 
 buildPythonPackage rec {
   pname = "jaraco-context";
-  version = "4.1.1";
-  format = "setuptools";
+  version = "4.1.2";
+  format = "pyproject";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "jaraco";
     repo = "jaraco.context";
-    rev = "v${version}";
-    sha256 = "O9Lwv2d/qbiXxIVCp6FLmVKaz0MzAUkoUd0jAyIvgJc=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-gfrDZW4d3X/QjUBN8DFSvKRLZge3pnZ6KkI7S7Nz3W0=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
@@ -34,7 +34,6 @@ buildPythonPackage rec {
 
   pythonImportsCheck = [ "jaraco.context" ];
 
-
   meta = with lib; {
     description = "Python module for context management";
     homepage = "https://github.com/jaraco/jaraco.context";
diff --git a/pkgs/development/python-modules/jaraco_collections/default.nix b/pkgs/development/python-modules/jaraco_collections/default.nix
index d45d354b38e72..686095d3b1c0f 100644
--- a/pkgs/development/python-modules/jaraco_collections/default.nix
+++ b/pkgs/development/python-modules/jaraco_collections/default.nix
@@ -1,23 +1,45 @@
-{ buildPythonPackage, fetchPypi, setuptools-scm
-, six, jaraco_classes, jaraco_text
+{ lib
+, buildPythonPackage
+, fetchPypi
+, setuptools-scm
+, jaraco_classes
+, jaraco_text
 }:
 
 buildPythonPackage rec {
   pname = "jaraco.collections";
-  version = "3.5.1";
+  version = "3.5.2";
+  format = "pyproject";
+
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b04f00bd4b3c4fc4ba5fe1baf8042c0efd192b13e386830ea23fff77bb69dc88";
+    sha256 = "sha256-ByuT6zX55IUISFdVU05mo07xzISvKR/Sfzm0TUwN0sM=";
   };
 
+  postPatch = ''
+    # break dependency cycle
+    sed -i "/'jaraco.text',/d" setup.cfg
+  '';
+
+  nativeBuildInputs = [
+    setuptools-scm
+  ];
+
+  propagatedBuildInputs = [
+    jaraco_classes
+    jaraco_text
+  ];
+
   pythonNamespaces = [ "jaraco" ];
 
   doCheck = false;
-  buildInputs = [ setuptools-scm ];
-  propagatedBuildInputs = [ six jaraco_classes jaraco_text ];
 
-  # break dependency cycle
-  patchPhase = ''
-    sed -i "/'jaraco.text',/d" setup.py
-  '';
+  pythonImportsCheck = [ "jaraco.collections" ];
+
+  meta = with lib; {
+    description = "Models and classes to supplement the stdlib 'collections' module";
+    homepage = "https://github.com/jaraco/jaraco.collections";
+    license = licenses.mit;
+    maintainers = with maintainers; [ ];
+  };
 }
diff --git a/pkgs/development/python-modules/jaraco_functools/default.nix b/pkgs/development/python-modules/jaraco_functools/default.nix
index 73aa7708cf253..de4b8c5ce489b 100644
--- a/pkgs/development/python-modules/jaraco_functools/default.nix
+++ b/pkgs/development/python-modules/jaraco_functools/default.nix
@@ -1,27 +1,36 @@
-{ lib, buildPythonPackage, fetchPypi
+{ lib
+, buildPythonPackage
+, fetchPypi
+, more-itertools
 , setuptools-scm
-, more-itertools, backports_functools_lru_cache }:
+}:
 
 buildPythonPackage rec {
   pname = "jaraco.functools";
-  version = "3.5.0";
+  version = "3.5.1";
+  format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "31e0e93d1027592b7b0bec6ad468db850338981ebee76ba5e212e235f4c7dda0";
+    sha256 = "sha256-0K3PkXEKCFPv6fI6ePrVhr9n31cvDW2OD6NtKJrhwdk=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
 
-  propagatedBuildInputs = [ more-itertools backports_functools_lru_cache ];
+  propagatedBuildInputs = [
+    more-itertools
+  ];
 
   doCheck = false;
 
   pythonNamespaces = [ "jaraco" ];
 
+  pythonImportsCheck = [ "jaraco.functools" ];
+
   meta = with lib; {
     description = "Additional functools in the spirit of stdlib's functools";
     homepage = "https://github.com/jaraco/jaraco.functools";
     license = licenses.mit;
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/development/python-modules/jaraco_text/default.nix b/pkgs/development/python-modules/jaraco_text/default.nix
index e1e82df89ea32..2bdf376ffe236 100644
--- a/pkgs/development/python-modules/jaraco_text/default.nix
+++ b/pkgs/development/python-modules/jaraco_text/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "jaraco.text";
-  version = "3.7.0";
-  format = "setuptools";
+  version = "3.8.1";
+  format = "pyproject";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-p/nMG0Sl8wlqIWy9EwtlDHprLJ+ABbAArpfzKSOafAA=";
+    sha256 = "sha256-RQlXw/j7mlU9nT5gc4czqxxcwns2pGM0KtuTfppwqz4=";
   };
 
   pythonNamespaces = [
diff --git a/pkgs/development/python-modules/jedi-language-server/default.nix b/pkgs/development/python-modules/jedi-language-server/default.nix
index 31e45176218c4..138390983e053 100644
--- a/pkgs/development/python-modules/jedi-language-server/default.nix
+++ b/pkgs/development/python-modules/jedi-language-server/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "jedi-language-server";
-  version = "0.36.0";
+  version = "0.36.1";
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "pappasam";
     repo = pname;
     rev = "refs/tags/v${version}";
-    sha256 = "sha256-PTLzZu3CZincY4zxN+/GUryTzWre595W+kztgCXTueo=";
+    sha256 = "sha256-gwaFveFzdkiMvvmdyLLQ/9JthrM6n/+y1XkDQnYp8Y8=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/jira/default.nix b/pkgs/development/python-modules/jira/default.nix
index c6b1386adec00..b867bf81b4859 100644
--- a/pkgs/development/python-modules/jira/default.nix
+++ b/pkgs/development/python-modules/jira/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "jira";
-  version = "3.1.1";
+  version = "3.3.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -23,8 +23,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "pycontribs";
     repo = pname;
-    rev = version;
-    hash = "sha256-1g7yNKRR7Ua2rjfiE1c94LKAQGVCX0gSeqTc2Pn7QhM=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-KRfyXWSnWmkt/SYmrpxG60KytEooMWNhHg8TrvFeATc=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/jmespath/default.nix b/pkgs/development/python-modules/jmespath/default.nix
index 18c2f46216f22..ca365b79b32db 100644
--- a/pkgs/development/python-modules/jmespath/default.nix
+++ b/pkgs/development/python-modules/jmespath/default.nix
@@ -1,26 +1,29 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, ply
-, nose
+, hypothesis
+, pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "jmespath";
-  version = "1.0.0";
+  version = "1.0.1";
+  format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-pJDigO3R9X1t6IY2mS0Ftx6X1pomoZ8Fjs99MER0v14=";
+    sha256 = "sha256-kCYbIG1t79WP3V6F9Hi/YzopAXmJBr4q04kVDFxg7b4=";
   };
 
-  buildInputs = [ nose ];
-  propagatedBuildInputs = [ ply ];
+  checkInputs = [
+    hypothesis
+    pytestCheckHook
+  ];
 
   meta = with lib; {
-    homepage = "https://github.com/boto/jmespath";
+    homepage = "https://github.com/jmespath/jmespath.py";
     description = "JMESPath allows you to declaratively specify how to extract elements from a JSON document";
-    license = "BSD";
+    license = licenses.mit;
+    maintainers = with maintainers; [ ];
   };
-
 }
diff --git a/pkgs/development/python-modules/jsondiff/default.nix b/pkgs/development/python-modules/jsondiff/default.nix
index fe41d0dd85401..b6d6401b455f6 100644
--- a/pkgs/development/python-modules/jsondiff/default.nix
+++ b/pkgs/development/python-modules/jsondiff/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "jsondiff";
-  version = "1.3.1";
+  version = "2.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-BM+uvUpeVziUirYVcQ3D7pjvvfhRJV/Tl3xMLuWecxI=";
+    sha256 = "sha256-J5WETvB17IorjThcTVn16kiwjnGA/OPLJ4e+DbALH7Q=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/jsonpickle/default.nix b/pkgs/development/python-modules/jsonpickle/default.nix
index 1ffbbdd5e8954..969869f86b52c 100644
--- a/pkgs/development/python-modules/jsonpickle/default.nix
+++ b/pkgs/development/python-modules/jsonpickle/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "jsonpickle";
-  version = "2.1.0";
+  version = "2.2.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-hGhM/FM4pTQXPI3WmAnkDyhl0L4fiit6+EZeW5aNz6k=";
+    sha256 = "sha256-eycpGLBVQYLlPcNA3dYtm3+QL+x+ewViDATzzO9Hmg4=";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/jsonpointer/default.nix b/pkgs/development/python-modules/jsonpointer/default.nix
index 2bd41e0815b4d..504b7f7035a69 100644
--- a/pkgs/development/python-modules/jsonpointer/default.nix
+++ b/pkgs/development/python-modules/jsonpointer/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "jsonpointer";
-  version = "2.2";
+  version = "2.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f09f8deecaaa5aea65b5eb4f67ca4e54e1a61f7a11c75085e360fe6feb6a48bf";
+    sha256 = "sha256-l8ulFSbIKSgiGP65nasbHmvfjv0cQ9ydV74JPA1pyZo=";
   };
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/jsonrpc-websocket/default.nix b/pkgs/development/python-modules/jsonrpc-websocket/default.nix
index c3d68f77d859e..9bd8ef8a108b4 100644
--- a/pkgs/development/python-modules/jsonrpc-websocket/default.nix
+++ b/pkgs/development/python-modules/jsonrpc-websocket/default.nix
@@ -33,6 +33,7 @@ buildPythonPackage rec {
   ];
 
   pytestFlagsArray = [
+    "--asyncio-mode=legacy"
     "tests.py"
   ];
 
diff --git a/pkgs/development/python-modules/jsonschema/default.nix b/pkgs/development/python-modules/jsonschema/default.nix
index 176334a0ed7ed..944f35b96422b 100644
--- a/pkgs/development/python-modules/jsonschema/default.nix
+++ b/pkgs/development/python-modules/jsonschema/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "jsonschema";
-  version = "4.6.1";
+  version = "4.7.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-7CgC5qN1F/CdR9m6EHlHWJrh0l/1V7kl2DoyH8KqXTs=";
+    sha256 = "sha256-c3ZPRh1h65egV8kpNoYQoTTR0f/9hYrP6Ihk7pTx8dM=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/jug/default.nix b/pkgs/development/python-modules/jug/default.nix
index 1dea4743cdb1a..6e3f053e6d3ea 100644
--- a/pkgs/development/python-modules/jug/default.nix
+++ b/pkgs/development/python-modules/jug/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "jug";
-  version = "2.2.0";
+  version = "2.2.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "Jug";
     inherit version;
-    hash = "sha256-2Y9xRr5DyV9UqG6tiq9rYET2Z7LaPXfzwYKKGwR3OSs=";
+    hash = "sha256-7yWVhvY5dAkmo29xjIUsJVy5oY43K7rcy4itGM+RIFk=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/jupyter-client/default.nix b/pkgs/development/python-modules/jupyter-client/default.nix
index 2670fc163f6c2..6df956de5208e 100644
--- a/pkgs/development/python-modules/jupyter-client/default.nix
+++ b/pkgs/development/python-modules/jupyter-client/default.nix
@@ -3,6 +3,7 @@
 , fetchPypi
 , entrypoints
 , jupyter_core
+, hatchling
 , nest-asyncio
 , python-dateutil
 , pyzmq
@@ -14,13 +15,18 @@
 
 buildPythonPackage rec {
   pname = "jupyter_client";
-  version = "7.2.1";
+  version = "7.3.4";
+  format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-qhdyeekyBdBoHsDi4hDaAbIsWhRkpWq9RVrcrGTw3pE=";
+    sha256 = "sha256-qppsMgVLKQN0+V9zuwyukUVcWN+4T2XIWRkSuPZebVY=";
   };
 
+  nativeBuildInputs = [
+    hatchling
+  ];
+
   propagatedBuildInputs = [
     entrypoints
     jupyter_core
diff --git a/pkgs/development/python-modules/jupyter-packaging/default.nix b/pkgs/development/python-modules/jupyter-packaging/default.nix
index bb2837d28fc88..ae700d9a8068e 100644
--- a/pkgs/development/python-modules/jupyter-packaging/default.nix
+++ b/pkgs/development/python-modules/jupyter-packaging/default.nix
@@ -2,26 +2,36 @@
 , buildPythonPackage
 , fetchPypi
 , deprecation
+, hatchling
 , pythonOlder
 , packaging
 , pytestCheckHook
+, pytest-timeout
 , tomlkit
 }:
 
 buildPythonPackage rec {
   pname = "jupyter-packaging";
-  version = "0.12.0";
+  version = "0.12.2";
   disabled = pythonOlder "3.7";
+  format = "pyproject";
 
   src = fetchPypi {
     pname = "jupyter_packaging";
     inherit version;
-    sha256 = "sha256-snRV1grck6e6ouC484a+gbkyu048ARYEbfntIwzT+qw=";
+    sha256 = "sha256-C5nq7PVrnR2Z57y2Yy2RSo6laY2kCyOLqJIno0FX3jI=";
   };
 
+  nativeBuildInputs = [
+    hatchling
+  ];
+
   propagatedBuildInputs = [ deprecation packaging tomlkit ];
 
-  checkInputs = [ pytestCheckHook ];
+  checkInputs = [
+    pytestCheckHook
+    pytest-timeout
+  ];
 
   preCheck = ''
     export HOME=$(mktemp -d)
diff --git a/pkgs/development/python-modules/jupyter-server-mathjax/default.nix b/pkgs/development/python-modules/jupyter-server-mathjax/default.nix
index 6b3ac52767d72..73797f8fd0d81 100644
--- a/pkgs/development/python-modules/jupyter-server-mathjax/default.nix
+++ b/pkgs/development/python-modules/jupyter-server-mathjax/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "jupyter-server-mathjax";
-  version = "0.2.5";
+  version = "0.2.6";
 
   src = fetchPypi {
     inherit version;
     pname = "jupyter_server_mathjax";
-    sha256 = "sha256-ZNlsjm3+btunN5ArLcOi3AWPF1FndsJfTTDKJGF+57M=";
+    sha256 = "sha256-ux5rbcBobB/jhqIrWIYWPbVIiTqZwoEMNjmenEyiOUM=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/jupyter-sphinx/default.nix b/pkgs/development/python-modules/jupyter-sphinx/default.nix
index 56cd051ecf4cb..7355cb9276418 100644
--- a/pkgs/development/python-modules/jupyter-sphinx/default.nix
+++ b/pkgs/development/python-modules/jupyter-sphinx/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "jupyter-sphinx";
-  version = "0.3.2";
+  version = "0.4.0";
 
   src = fetchPypi {
     inherit version;
     pname = "jupyter_sphinx";
-    sha256 = "37fc9408385c45326ac79ca0452fbd7ae2bf0e97842d626d2844d4830e30aaf2";
+    sha256 = "sha256-DBGjjxNDE48sUFHA00xMVF9EgBdMG9QcAlb+gm4LqlU=";
   };
 
   propagatedBuildInputs = [ nbconvert nbformat sphinx ipywidgets ];
diff --git a/pkgs/development/python-modules/jupyter_console/default.nix b/pkgs/development/python-modules/jupyter_console/default.nix
index 5a3176b462c6e..8943ba8adc0b1 100644
--- a/pkgs/development/python-modules/jupyter_console/default.nix
+++ b/pkgs/development/python-modules/jupyter_console/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "jupyter_console";
-  version = "6.4.3";
+  version = "6.4.4";
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-VfMmJrC+ZHqF4yF93Nsi22nvx56LQDuXceuezGlgGbU=";
+    sha256 = "sha256-Fy9TNeMdYA32FhOpe38DUvLIJQu9EJLvLWWPdySfifs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/jupyter_server/default.nix b/pkgs/development/python-modules/jupyter_server/default.nix
index 96dc7e82bcab2..657e7a9ce3006 100644
--- a/pkgs/development/python-modules/jupyter_server/default.nix
+++ b/pkgs/development/python-modules/jupyter_server/default.nix
@@ -30,12 +30,12 @@
 
 buildPythonPackage rec {
   pname = "jupyter_server";
-  version = "1.17.1";
+  version = "1.18.1";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a36781656645ae17b12819a49ace377c045bf633823b3e4cd4b0c88c01e7711b";
+    sha256 = "sha256-K3L8WVvMrikiYKrYFXoOrY2ixwPsauG7ezbbrQ4mfqc=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/jupyterlab-git/default.nix b/pkgs/development/python-modules/jupyterlab-git/default.nix
index 9f36e03d48854..606e2226d22e8 100644
--- a/pkgs/development/python-modules/jupyterlab-git/default.nix
+++ b/pkgs/development/python-modules/jupyterlab-git/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "jupyterlab-git";
-  version = "0.36.0";
+  version = "0.37.1";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     pname = "jupyterlab_git";
     inherit version;
-    sha256 = "sha256-K+h1ra9PsqKlSSPnc1jgSODICv3FoEdwqBGYWQYs6wE=";
+    sha256 = "sha256-vOM2y8XrjmKtVtI6h4/DUrHzSLJuZXIm0C7//gMh+5o=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/jupyterlab_server/default.nix b/pkgs/development/python-modules/jupyterlab_server/default.nix
index e3693b450d768..3c9636ed75249 100644
--- a/pkgs/development/python-modules/jupyterlab_server/default.nix
+++ b/pkgs/development/python-modules/jupyterlab_server/default.nix
@@ -17,12 +17,12 @@
 
 buildPythonPackage rec {
   pname = "jupyterlab_server";
-  version = "2.12.0";
+  version = "2.15.0";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-AOD0tMOZ9Vk4Mj6hDPktkVKI/hJ1PjXRBp9soItyq78=";
+    sha256 = "sha256-qRxRXg55caj3w8mDS3SIV/faxQL5NgS/KDmHmR/Zh+8=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/kajiki/default.nix b/pkgs/development/python-modules/kajiki/default.nix
index 76289816a2a82..5a2829de0520c 100644
--- a/pkgs/development/python-modules/kajiki/default.nix
+++ b/pkgs/development/python-modules/kajiki/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "kajiki";
-  version = "0.9.0";
+  version = "0.9.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f0d6dfa27eb2b6c0d2a28ae21d69dceb5363cc0432f4045bcc98aac42a662ccb";
+    sha256 = "sha256-Qe/FTQ6YrHiVklP3HFG9HsT7Yny6we2+Ithcj2UFdp4=";
   };
 
   propagatedBuildInputs = [ babel pytz nine ];
diff --git a/pkgs/development/python-modules/karton-dashboard/default.nix b/pkgs/development/python-modules/karton-dashboard/default.nix
index 5b67123ee2788..2e103d0b088f6 100644
--- a/pkgs/development/python-modules/karton-dashboard/default.nix
+++ b/pkgs/development/python-modules/karton-dashboard/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "karton-dashboard";
-  version = "1.2.1";
+  version = "1.3.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -18,8 +18,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "CERT-Polska";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-C1wtpHyuTlNS6Se1rR0RGUl3xht4aphAtddKlIsOAkI=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-thjAgK5EgevkFdKooljrrejwJorT6Lea9QSF0cZhxmw=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/keras/default.nix b/pkgs/development/python-modules/keras/default.nix
index dbdebefdb5a08..edb928e682b7b 100644
--- a/pkgs/development/python-modules/keras/default.nix
+++ b/pkgs/development/python-modules/keras/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "keras";
-  version = "2.8.0";
+  version = "2.9.0";
   format = "wheel";
 
   src = fetchPypi {
     inherit format pname version;
-    sha256 = "sha256-dE053GV33NgP9KTUFUnpK3fWoX4O3VikMdMGVuKbyU4=";
+    sha256 = "sha256-VZESVvic/JNDyfvkth7EWi0z2Jcpy+GrncrPiwe4tqs=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/keyring/default.nix b/pkgs/development/python-modules/keyring/default.nix
index 72ebfec8f758f..743220e89ee77 100644
--- a/pkgs/development/python-modules/keyring/default.nix
+++ b/pkgs/development/python-modules/keyring/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "keyring";
-  version = "23.6.0";
+  version = "23.7.0";
   disabled = pythonOlder "3.7";
 
   format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-OsAMJuTJNznhkQMJGpmGqfeWZaeM8VpN8dun6prI2i8=";
+    hash = "sha256-eC4c0RMukb9Fn80kO88lsyYBXBrAsZjkQI+R+meRBis=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/keyrings-alt/default.nix b/pkgs/development/python-modules/keyrings-alt/default.nix
index a45be02b55b28..45a85f0fd8fd8 100644
--- a/pkgs/development/python-modules/keyrings-alt/default.nix
+++ b/pkgs/development/python-modules/keyrings-alt/default.nix
@@ -1,32 +1,38 @@
-{ lib, buildPythonPackage, fetchPypi, pythonOlder, isPy27, six
-, pytest, backports_unittest-mock, keyring, setuptools-scm
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pythonOlder
+, isPy27
+, six
+
+, pytestCheckHook
+, keyring
+, setuptools-scm
 }:
 
 buildPythonPackage rec {
   pname = "keyrings.alt";
-  version = "4.1.0";
+  version = "4.1.1";
+  format = "pyproject";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "52ccb61d6f16c10f32f30d38cceef7811ed48e086d73e3bae86f0854352c4ab2";
+    sha256 = "sha256-6HFSuVYvqCK1Ew7jECVRK02m5tsNrzjIcFZtCLhK3tY=";
   };
 
-  postPatch = ''
-    substituteInPlace pytest.ini \
-      --replace "--flake8" ""
-  '';
-
-  nativeBuildInputs = [ setuptools-scm ];
-  propagatedBuildInputs = [ six ];
+  nativeBuildInputs = [
+    setuptools-scm
+  ];
 
-  checkInputs = [ pytest keyring ] ++ lib.optional (pythonOlder "3.3") backports_unittest-mock;
+  propagatedBuildInputs = [
+    six
+  ];
 
-  # heavily relies on importing tests from keyring package
-  doCheck = false;
-  checkPhase = ''
-    py.test
-  '';
+  checkInputs = [
+    pytestCheckHook
+    keyring
+  ];
 
   pythonImportsCheck = [
     "keyrings.alt"
diff --git a/pkgs/development/python-modules/keystoneauth1/default.nix b/pkgs/development/python-modules/keystoneauth1/default.nix
index 258b3a56180f6..cc10ec96686c8 100644
--- a/pkgs/development/python-modules/keystoneauth1/default.nix
+++ b/pkgs/development/python-modules/keystoneauth1/default.nix
@@ -24,11 +24,11 @@
 
 buildPythonPackage rec {
   pname = "keystoneauth1";
-  version = "4.6.0";
+  version = "5.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-Bm8a3diRFM1qG5yzVVyOqn0BNnPuEDS9/lBgaIBKngU=";
+    sha256 = "sha256-brtfBEyd/SYwh6Mo1R1HmUfR3ckMCdr0GR333HEzQyM=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/kiwisolver/default.nix b/pkgs/development/python-modules/kiwisolver/default.nix
index b968fa3a50aa6..e51324989e663 100644
--- a/pkgs/development/python-modules/kiwisolver/default.nix
+++ b/pkgs/development/python-modules/kiwisolver/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "kiwisolver";
-  version = "1.4.2";
+  version = "1.4.4";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-f2BtkbiogWvkdlE6d/0wq+ZiJwOb1vi0BsNIywJH3Mk=";
+    hash = "sha256-1BmXUZ/LpKHkbrSi/jG8EvD/lXsrgbrCjbJHRPMz6VU=";
   };
 
   NIX_CFLAGS_COMPILE = lib.optionalString stdenv.isDarwin [
diff --git a/pkgs/development/python-modules/labelbox/default.nix b/pkgs/development/python-modules/labelbox/default.nix
index 27f05d83aa058..9b0b241c5ed14 100644
--- a/pkgs/development/python-modules/labelbox/default.nix
+++ b/pkgs/development/python-modules/labelbox/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "labelbox";
-  version = "3.15.0";
+  version = "3.24.1";
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "Labelbox";
     repo = "labelbox-python";
-    rev = "v.${version}";
-    sha256 = "sha256-pJkDC/2EDPWbIw9WqV9kdYmr4X6apXtholzd0IYjgDg=";
+    rev = "refs/tags/v.${version}";
+    sha256 = "sha256-pcIbCtVOr6pwodgNv8aGZ+k2Z9cQPCQm1UBJWJAlj/o=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/libcst/default.nix b/pkgs/development/python-modules/libcst/default.nix
index 7d6c185d1cc29..d763c52d8191e 100644
--- a/pkgs/development/python-modules/libcst/default.nix
+++ b/pkgs/development/python-modules/libcst/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "libcst";
-  version = "0.4.3";
+  version = "0.4.7";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -25,15 +25,15 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "instagram";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-Lm62rVL5f+fu4KzOQMroM0Eu27l5v2dkGtRiIVPFNhg=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-YrGajxs8t8PU4XRkFlhwtxoa9pzpKPXq8ZvN/uqftlE=";
   };
 
   cargoDeps = rustPlatform.fetchCargoTarball {
     inherit src;
     sourceRoot = "source/${cargoRoot}";
     name = "${pname}-${version}";
-    hash = "sha256-i5BYYiILadKEPIJOaWdG1lZNSHfNQnwmc5j0D1jg/kc=";
+    hash = "sha256-V/WHZVvh8HtD8IUNk3V4e8/E2A8DebqY5i/lS1X6x3o=";
   };
 
   cargoRoot = "native";
diff --git a/pkgs/development/python-modules/libevdev/default.nix b/pkgs/development/python-modules/libevdev/default.nix
index 494e887c79bca..2807804b77d92 100644
--- a/pkgs/development/python-modules/libevdev/default.nix
+++ b/pkgs/development/python-modules/libevdev/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "libevdev";
-  version = "0.10";
+  version = "0.11";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-9LM2Ftr6qmQYysCxso+XJSthwJdOU01J+yL8ZWbtwRM=";
+    sha256 = "sha256-6coAak3ySIpgvZp0ABHulI2BkEviNk8BflYBaVCPVg8=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/librosa/default.nix b/pkgs/development/python-modules/librosa/default.nix
index 21a58e7e98170..d12087e59f3f5 100644
--- a/pkgs/development/python-modules/librosa/default.nix
+++ b/pkgs/development/python-modules/librosa/default.nix
@@ -14,11 +14,11 @@
 
 buildPythonPackage rec {
   pname = "librosa";
-  version = "0.9.1";
+  version = "0.9.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ftXW4/RUbl48KEBpH53cVoePkUo1pQBg31/KKybUthQ=";
+    sha256 = "sha256-W1drXv3OQo6QvJiL3VqVPRKnJ+X5MfMNdMU7Y6u+PIk=";
   };
 
   propagatedBuildInputs = [ joblib matplotlib six scikit-learn decorator audioread resampy soundfile pooch ];
diff --git a/pkgs/development/python-modules/limits/default.nix b/pkgs/development/python-modules/limits/default.nix
index c28986085830d..5064f39b991de 100644
--- a/pkgs/development/python-modules/limits/default.nix
+++ b/pkgs/development/python-modules/limits/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "limits";
-  version = "2.6.3";
+  version = "2.7.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -32,7 +32,7 @@ buildPythonPackage rec {
     postFetch = ''
       rm "$out/limits/_version.py"
     '';
-    hash = "sha256-YAuq8QycQ55emU2S0rQHxdHCD+jSRmzUKeYFdrV9NzM=";
+    hash = "sha256-TBZElCogPtoR2qX1YjBgpYh99LhrvLHFtr2ogemo9/c=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/limnoria/default.nix b/pkgs/development/python-modules/limnoria/default.nix
index b0672c012a97e..2291a4ffcc7d4 100644
--- a/pkgs/development/python-modules/limnoria/default.nix
+++ b/pkgs/development/python-modules/limnoria/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "limnoria";
-  version = "2022.4.22";
+  version = "2022.6.23";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-NKRxt25uvMBvSpY8vk4Vr56NmnW2VTpOLBHUzM2j/yc=";
+    hash = "sha256-f5xrLeIl1KbHBx8csUNKPWLX1tMiMitPULnoW4+vCtI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/line_profiler/default.nix b/pkgs/development/python-modules/line_profiler/default.nix
index 76aa30f069805..ba92bf09e0b50 100644
--- a/pkgs/development/python-modules/line_profiler/default.nix
+++ b/pkgs/development/python-modules/line_profiler/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "line-profiler";
-  version = "3.4.0";
+  version = "3.5.1";
 
   disabled = pythonOlder "3.6" || isPyPy;
 
   src = fetchPypi {
     pname = "line_profiler";
     inherit version;
-    sha256 = "b6b0a8100a2829358e31ef7c6f427b1dcf2b1d8e5d38b55b219719ecf758aee5";
+    sha256 = "sha256-d0ACCL+9XUNBk4qaOk+1GU9a9/wjstSWyRN1X4MQ6Lg=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/liquidctl/default.nix b/pkgs/development/python-modules/liquidctl/default.nix
index ddf73ee56b86c..37347331b587c 100644
--- a/pkgs/development/python-modules/liquidctl/default.nix
+++ b/pkgs/development/python-modules/liquidctl/default.nix
@@ -14,14 +14,15 @@
 
 buildPythonPackage rec {
   pname = "liquidctl";
-  version = "1.8.1";
+  version = "1.10.0";
   disabled = pythonOlder "3.6";
+  format = "pyproject";
 
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0cl1xg3rqpn4yjflwcz667pwfjnbq0g41pkg2nak7x9mxqnbdk70";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-2mXWih3LchJ/YsjuwHwWse7SNJYx1vxtovl8vasKV4w=";
   };
 
   nativeBuildInputs = [ installShellFiles ];
diff --git a/pkgs/development/python-modules/llvmlite/default.nix b/pkgs/development/python-modules/llvmlite/default.nix
index 637a4deb3abb6..b928fe59c1cd7 100644
--- a/pkgs/development/python-modules/llvmlite/default.nix
+++ b/pkgs/development/python-modules/llvmlite/default.nix
@@ -12,13 +12,13 @@
 
 buildPythonPackage rec {
   pname = "llvmlite";
-  version = "0.38.0";
+  version = "0.38.1";
 
   disabled = isPyPy || !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a99d166ccf3b116f3b9ed23b9b70ba2415640a9c978f3aaa13fad49c58f4965c";
+    sha256 = "sha256-BiKoYwH8+BzFDX7VtL6+mSwDBYDUE6hEOzKO1PTYJWE=";
   };
 
   nativeBuildInputs = [ llvm ];
diff --git a/pkgs/development/python-modules/lru-dict/default.nix b/pkgs/development/python-modules/lru-dict/default.nix
index b075ead342973..36b8c89789547 100644
--- a/pkgs/development/python-modules/lru-dict/default.nix
+++ b/pkgs/development/python-modules/lru-dict/default.nix
@@ -6,7 +6,7 @@
 
 let
   pname = "lru-dict";
-  version = "1.1.7";
+  version = "1.1.8";
 in
 buildPythonPackage {
   inherit pname version;
@@ -14,7 +14,7 @@ buildPythonPackage {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-RbgfZ9dTQdRDOrreeZpH6cQqniKhGFMdy15UmGQDLXw=";
+    hash = "sha256-h4vI70Bz5c+5U9/Bz0WF20HouBTAEGq9400A7g0LMRU=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/lxml/default.nix b/pkgs/development/python-modules/lxml/default.nix
index 08b66f8ff5fb2..f0a9d6ff523a2 100644
--- a/pkgs/development/python-modules/lxml/default.nix
+++ b/pkgs/development/python-modules/lxml/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "lxml";
-  version = "4.9.0";
+  version = "4.9.1";
 
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
-    rev = "lxml-${version}";
-    sha256 = "sha256-3bPyfsiJGDNB0MPw4OhATRnsM3I8ThZwvPWI+easgNo=";
+    rev = "refs/tags/lxml-${version}";
+    sha256 = "sha256-5MJw3ciXYnfctSNcemJ/QJGKAaYpadvdbFhkc8+pmPM=";
   };
 
   # setuptoolsBuildPhase needs dependencies to be passed through nativeBuildInputs
diff --git a/pkgs/development/python-modules/lz4/default.nix b/pkgs/development/python-modules/lz4/default.nix
index c6966e632f05e..aaf4e0aa69bcc 100644
--- a/pkgs/development/python-modules/lz4/default.nix
+++ b/pkgs/development/python-modules/lz4/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "python-lz4";
-  version = "4.0.0";
+  version = "4.0.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.5";
@@ -24,8 +24,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-9gp67i2fotvFOpkaQZ82/YKnDEs3DnzXfuNCVRJg88I=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-hQuZkstsB37pFDWmA0W6qGd7rAer1mun7Z6MxMp0ZmE=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
diff --git a/pkgs/development/python-modules/m2r/default.nix b/pkgs/development/python-modules/m2r/default.nix
index 526f2b128678f..b3077edcc5d4c 100644
--- a/pkgs/development/python-modules/m2r/default.nix
+++ b/pkgs/development/python-modules/m2r/default.nix
@@ -22,6 +22,7 @@ buildPythonPackage rec {
       url = "https://github.com/miyakogi/m2r/commit/58ee9cabdadf5e3deb13037f3052238f0f2bffcd.patch";
       sha256 = "sha256-CN3PWmnk7xsn1wngRHuEWmDTP3HtVNxkFv0xzD2Zjlo=";
     })
+    ./docutils-0.19-compat.patch
   ];
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/m2r/docutils-0.19-compat.patch b/pkgs/development/python-modules/m2r/docutils-0.19-compat.patch
new file mode 100644
index 0000000000000..9392702b982e3
--- /dev/null
+++ b/pkgs/development/python-modules/m2r/docutils-0.19-compat.patch
@@ -0,0 +1,15 @@
+diff --git a/m2r.py b/m2r.py
+index a4e43c2..fb9e588 100644
+--- a/m2r.py
++++ b/m2r.py
+@@ -10,8 +10,8 @@ from argparse import ArgumentParser, Namespace
+ 
+ from docutils import statemachine, nodes, io, utils
+ from docutils.parsers import rst
+-from docutils.core import ErrorString
+-from docutils.utils import SafeString, column_width
++from docutils.utils.error_reporting import ErrorString, SafeString
++from docutils.utils import column_width
+ import mistune
+ 
+ if sys.version_info < (3, ):
diff --git a/pkgs/development/python-modules/maestral/default.nix b/pkgs/development/python-modules/maestral/default.nix
index 63cb8db5fd460..d8f34ae0569a4 100644
--- a/pkgs/development/python-modules/maestral/default.nix
+++ b/pkgs/development/python-modules/maestral/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "maestral";
-  version = "1.5.3";
+  version = "1.6.3";
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "SamSchott";
     repo = "maestral";
-    rev = "v${version}";
-    sha256 = "sha256-Uo3vcYez2qSq162SSKjoCkwygwR5awzDceIq8/h3dao=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-JVzaWwdHAn5JOruLEN9Z2/5eV1oh3J2NQffNI3RqYfA=";
   };
 
   format = "pyproject";
diff --git a/pkgs/development/python-modules/magicgui/default.nix b/pkgs/development/python-modules/magicgui/default.nix
index e437ee7290b26..d6c6108d52bed 100644
--- a/pkgs/development/python-modules/magicgui/default.nix
+++ b/pkgs/development/python-modules/magicgui/default.nix
@@ -12,15 +12,15 @@
 , napari # a reverse-dependency, for tests
 }: buildPythonPackage rec {
   pname = "magicgui";
-  version = "0.3.7";
+  version = "0.5.1";
 
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "napari";
     repo = "magicgui";
-    rev = "v${version}";
-    sha256 = "sha256-LYXNNr5lS3ibQk2NIopZkB8kzC7j3yY8moGMk0Gr+hU=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-fVfBQaaT8/lUGqZRXjOPgvkC01Izb8Sxqn7RCqnW9bo=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
diff --git a/pkgs/development/python-modules/mailsuite/default.nix b/pkgs/development/python-modules/mailsuite/default.nix
index 8d1046387ef0e..adc6ec35051d2 100644
--- a/pkgs/development/python-modules/mailsuite/default.nix
+++ b/pkgs/development/python-modules/mailsuite/default.nix
@@ -4,32 +4,44 @@
 , lib
 
 # pythonPackages
+, hatchling
 , dnspython
+, expiringdict
 , html2text
 , mail-parser
 , imapclient
+, publicsuffix2
 }:
 
 buildPythonPackage rec {
   pname = "mailsuite";
-  version = "1.6.1";
+  version = "1.9.2";
+  format = "pyproject";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "17bsnfjjzv8hx5h397p5pa92l6cqc53i0zjjz2p7bjj3xqzhs45a";
+    hash = "sha256-UV9cdWdUnUt4j1Puf1H0UxXsCHi3t4uNiKHwYNfTfa4=";
   };
 
+  nativeBuildInputs = [
+    hatchling
+  ];
+
   propagatedBuildInputs = [
     dnspython
+    expiringdict
     html2text
     mail-parser
     imapclient
+    publicsuffix2
   ];
 
   pythonImportsCheck = [ "mailsuite" ];
 
+  doCheck = false;
+
   meta = {
     description = "A Python package to simplify receiving, parsing, and sending email";
     homepage = "https://seanthegeek.github.io/mailsuite/";
diff --git a/pkgs/development/python-modules/makefun/default.nix b/pkgs/development/python-modules/makefun/default.nix
index 1d4ae635800c9..030ea2df31613 100644
--- a/pkgs/development/python-modules/makefun/default.nix
+++ b/pkgs/development/python-modules/makefun/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "makefun";
-  version = "1.13.1";
+  version = "1.14.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "985bb8b670ffbbb95d2a8aa996d318e6e9a3f26fc6f3ef2da93ebdf8f9c616bf";
+    sha256 = "sha256-dwxuRY8e9HMEGFM08daG7iAXVdBhUqh44mRidTQMGB0=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/markdown-include/default.nix b/pkgs/development/python-modules/markdown-include/default.nix
index 389c94fb23819..091809d8314b6 100644
--- a/pkgs/development/python-modules/markdown-include/default.nix
+++ b/pkgs/development/python-modules/markdown-include/default.nix
@@ -1,17 +1,20 @@
 { lib
 , buildPythonPackage
-, fetchPypi
+, fetchFromGitHub
 , markdown
 }:
 
 buildPythonPackage rec {
   pname = "markdown-include";
-  version = "0.6.0";
+  version = "0.7.0";
   format = "setuptools";
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "18p4qfhazvskcg6xsdv1np8m1gc1llyabp311xzhqy7p6q76hpbg";
+  # only wheel on pypi
+  src = fetchFromGitHub {
+    owner = "cmacmackin";
+    repo = pname;
+    rev = "v${version}";
+    hash = "sha256-2pC0K/Z5l7q6sx4FSM4Pi1/5bt1wLZsqOmcbnE47rVs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/markdown-it-py/default.nix b/pkgs/development/python-modules/markdown-it-py/default.nix
index c1a0f58789bda..f4c83d5df3486 100644
--- a/pkgs/development/python-modules/markdown-it-py/default.nix
+++ b/pkgs/development/python-modules/markdown-it-py/default.nix
@@ -2,6 +2,7 @@
 , attrs
 , buildPythonPackage
 , fetchFromGitHub
+, flit-core
 , linkify-it-py
 , mdurl
 , psutil
@@ -14,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "markdown-it-py";
-  version = "2.0.1";
+  version = "2.1.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
@@ -22,10 +23,14 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "executablebooks";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0qrsl4ajhi2263i5q1kivp2s3n7naq3byfbsv11rni18skw3i2a6";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-6UATJho3SuIbLktZtFcDrCTWIAh52E+n5adcgl49un0=";
   };
 
+  nativeBuildInputs = [
+    flit-core
+  ];
+
   propagatedBuildInputs = [
     attrs
     linkify-it-py
diff --git a/pkgs/development/python-modules/matrix-nio/default.nix b/pkgs/development/python-modules/matrix-nio/default.nix
index 724a1459b7794..586f1ef96a1c4 100644
--- a/pkgs/development/python-modules/matrix-nio/default.nix
+++ b/pkgs/development/python-modules/matrix-nio/default.nix
@@ -78,7 +78,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
-  pytestFlagsArray = [ "--benchmark-disable" ];
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+    "--benchmark-disable"
+  ];
 
   disabledTests = [
     # touches network
diff --git a/pkgs/development/python-modules/mautrix/default.nix b/pkgs/development/python-modules/mautrix/default.nix
index 9fafec281ddf9..7b85a17a31a36 100644
--- a/pkgs/development/python-modules/mautrix/default.nix
+++ b/pkgs/development/python-modules/mautrix/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "mautrix";
-  version = "0.16.3";
+  version = "0.17.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-OpHLh5pCzGooQ5yxAa0+85m/szAafV+l+OfipQcfLtU=";
+    sha256 = "sha256-j49NrZJMDw8m5ZGP4DXxk7uzF+0BxDjs4coEkMDUP+0=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/mdx-truly-sane-lists/default.nix b/pkgs/development/python-modules/mdx-truly-sane-lists/default.nix
index 9ea39e27a16e3..5d100c3d24f5b 100644
--- a/pkgs/development/python-modules/mdx-truly-sane-lists/default.nix
+++ b/pkgs/development/python-modules/mdx-truly-sane-lists/default.nix
@@ -1,6 +1,7 @@
 { lib
 , buildPythonPackage
 , fetchFromGitHub
+, fetchpatch
 , markdown
 , python
 }:
@@ -16,10 +17,23 @@ buildPythonPackage rec {
     sha256 = "1h8403ch016cwdy5zklzp7c6xrdyyhl4z07h97qzbafrbq07jyss";
   };
 
+  patches = [
+    # fix with markdown>=3.4
+    # Upstream PR: https://github.com/radude/mdx_truly_sane_lists/pull/12/
+    (fetchpatch {
+      url = "https://github.com/radude/mdx_truly_sane_lists/commit/197fa16bc8d3481b8ea29d54b9cc89716f5d43a2.patch";
+      sha256 = "sha256-cYCb+EI4RpebNN02bCy1SSH9Tz4BsnFgUCOeQNC03Oo=";
+    })
+  ];
+
   propagatedBuildInputs = [ markdown ];
 
   pythonImportsCheck = [ "mdx_truly_sane_lists" ];
 
+  # Hard ImportError from the package trying to view version of markdown,
+  # which was removed.
+  # Upstream issue: https://github.com/radude/mdx_truly_sane_lists/issues/11
+  doCheck = false;
   checkPhase = ''
     ${python.interpreter} mdx_truly_sane_lists/tests.py
   '';
diff --git a/pkgs/development/python-modules/memory-allocator/default.nix b/pkgs/development/python-modules/memory-allocator/default.nix
index bee35f94f6e96..921f2962f25d7 100644
--- a/pkgs/development/python-modules/memory-allocator/default.nix
+++ b/pkgs/development/python-modules/memory-allocator/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "memory-allocator";
-  version = "0.1.2";
+  version = "0.1.3";
 
   src = fetchPypi {
     inherit version;
     pname = "memory_allocator";
-    sha256 = "ddf42a2dcc678062f30c63c868335204d46a4ecdf4db0dc43ed4529f1d0ffab9";
+    sha256 = "sha256-E4BcKuHAG3SJ+rXo6sk2FmK08sAkEuNlLuzkj/aVMWI=";
   };
 
   propagatedBuildInputs = [ cython ];
diff --git a/pkgs/development/python-modules/mezzanine/default.nix b/pkgs/development/python-modules/mezzanine/default.nix
index 6607dc0739dec..d4087e12c88d6 100644
--- a/pkgs/development/python-modules/mezzanine/default.nix
+++ b/pkgs/development/python-modules/mezzanine/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "mezzanine";
-  version = "5.1.3";
+  version = "6.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6" || isPyPy;
@@ -29,7 +29,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "Mezzanine";
     inherit version;
-    hash = "sha256-G/Oj5g70tFUhnbSVElVk0s9Ka+MEuPsEgj6blcFBOoY=";
+    hash = "sha256-R/PB4PFQpVp6jnCasyPszgC294SKjLzq2oMkR2qV86s=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/minio/default.nix b/pkgs/development/python-modules/minio/default.nix
index 5b142406fab09..e91507379e009 100644
--- a/pkgs/development/python-modules/minio/default.nix
+++ b/pkgs/development/python-modules/minio/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "minio";
-  version = "7.1.4";
+  version = "7.1.10";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -24,8 +24,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "minio";
     repo = "minio-py";
-    rev = version;
-    sha256 = "sha256-IzITqo23pRf83SFpnBZdryGHIsxh+7HrLVLM9CT5nQQ=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-od+I3rPLyLYbHAadWks5ccRkmAqhwn4+geRKq0qSnAs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/mitmproxy/default.nix b/pkgs/development/python-modules/mitmproxy/default.nix
index ea0f5dd1045e0..5508f39531a56 100644
--- a/pkgs/development/python-modules/mitmproxy/default.nix
+++ b/pkgs/development/python-modules/mitmproxy/default.nix
@@ -51,7 +51,7 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
-    rev = "v${version}";
+    rev = "refs/tags/v${version}";
     sha256 = "sha256-nW/WfiY6uF67qNa95tvNvSv/alP2WmzTk34LEBma/04=";
   };
 
diff --git a/pkgs/development/python-modules/mkdocs-material/default.nix b/pkgs/development/python-modules/mkdocs-material/default.nix
index d4d8f7875e09d..fed1eab648e66 100644
--- a/pkgs/development/python-modules/mkdocs-material/default.nix
+++ b/pkgs/development/python-modules/mkdocs-material/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonApplication rec {
   pname = "mkdocs-material";
-  version = "8.3.7";
+  version = "8.3.9";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -22,7 +22,7 @@ buildPythonApplication rec {
     owner = "squidfunk";
     repo = pname;
     rev = "refs/tags/${version}";
-    hash = "sha256-LOsgWRjKFZ+ZkJkQzDStNNBUh+AwlI8zZcUBz7L/Ook=";
+    hash = "sha256-Mi5eWznVuyH+69RtS0fUS9YD9mCumTk8HmgLVDKZC+I=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/mlflow/default.nix b/pkgs/development/python-modules/mlflow/default.nix
index 7f3f97255d960..9016272384ad1 100644
--- a/pkgs/development/python-modules/mlflow/default.nix
+++ b/pkgs/development/python-modules/mlflow/default.nix
@@ -32,14 +32,14 @@
 
 buildPythonPackage rec {
   pname = "mlflow";
-  version = "1.26.1";
+  version = "1.27.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-VoBESElY6nG9MU7UICbP2V5kH+6+GFaKMuy/mv6bk9Q=";
+    hash = "sha256-ah401r4mZyXkHUVHVyqEJdhtZiPhyIiM8/IrkAGb4Ko=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/mlxtend/default.nix b/pkgs/development/python-modules/mlxtend/default.nix
index 05fc6b4bb59ac..63cc4e3b39ec6 100644
--- a/pkgs/development/python-modules/mlxtend/default.nix
+++ b/pkgs/development/python-modules/mlxtend/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "mlxtend";
-  version = "0.19.0";
+  version = "0.20.0";
   disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "rasbt";
     repo = pname;
-    rev = version;
-    sha256 = "0qawzlzv4zf612n9n03fxnz6gxmzschq0ykh9dgv70l33ihmjbaw";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-ECDO3nc9IEgmZNdSA70BzOODOi0wnisI00F2Dxzdz+M=";
   };
 
   checkInputs = [ pytestCheckHook ];
diff --git a/pkgs/development/python-modules/mne-python/default.nix b/pkgs/development/python-modules/mne-python/default.nix
index c6e9ee01ffed2..cfebe532375fa 100644
--- a/pkgs/development/python-modules/mne-python/default.nix
+++ b/pkgs/development/python-modules/mne-python/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "mne-python";
-  version = "0.24.1";
+  version = "1.0.3";
 
   disabled = isPy27;
 
@@ -24,8 +24,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "mne-tools";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0n91pj97xmpn0bmlv56q2117szlvvs4b52pjjlm3g8ny4xb3iwr0";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-6eDS/hKqEQqUxJtnfsPhxw9b4p5CC1ifnxVCRBmVVA8=";
   };
 
   propagatedBuildInputs = [ numpy scipy ];
diff --git a/pkgs/development/python-modules/mocket/default.nix b/pkgs/development/python-modules/mocket/default.nix
index bba7b1884176f..1e9203f4abe02 100644
--- a/pkgs/development/python-modules/mocket/default.nix
+++ b/pkgs/development/python-modules/mocket/default.nix
@@ -19,12 +19,12 @@
 
 buildPythonPackage rec {
   pname = "mocket";
-  version = "3.10.5";
+  version = "3.10.6";
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-rF6ol5T6wH0nNmaP+lHQL8H+XZz1kl7OEe7NNO4MCtw=";
+    sha256 = "sha256-pD6WiK3OgDD2Xy9r59KOB9TT/LNiQa/DWRXA+w76oe8=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/mongoengine/default.nix b/pkgs/development/python-modules/mongoengine/default.nix
index 269ebf2ef3cfd..ff91a63d792f0 100644
--- a/pkgs/development/python-modules/mongoengine/default.nix
+++ b/pkgs/development/python-modules/mongoengine/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "mongoengine";
-  version = "0.24.0";
+  version = "0.24.1";
   disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "MongoEngine";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-BQSB4SGlejARFreeTfqFMzCWvBc6Vvq9EOMLjhAihdI=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-KmCk4YTkwpWePTOOFyp4hGIcxpy/rrfAAC1/Xes/IYk=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/more-itertools/default.nix b/pkgs/development/python-modules/more-itertools/default.nix
index 21f0b70f63acf..9f3ce69394fab 100644
--- a/pkgs/development/python-modules/more-itertools/default.nix
+++ b/pkgs/development/python-modules/more-itertools/default.nix
@@ -1,32 +1,43 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, nose
+, flit-core
+, pytestCheckHook
 , six
 , stdenv
 }:
 
-
 buildPythonPackage rec {
   pname = "more-itertools";
-  version = "8.12.0";
+  version = "8.13.0";
+  format = "flit";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7dc6ad46f05f545f900dd59e8dfb4e84a4827b97b3cfecb175ea0c7d247f6064";
+    sha256 = "sha256-pCkBoKWxadkl9vIXzVoZDjLvVDYJBbnDnufbUxO/7A8=";
   };
 
-  checkInputs = [ nose ];
-  propagatedBuildInputs = [ six ];
+  nativeBuildInouts = [
+    flit-core
+  ];
+
+  propagatedBuildInputs = [
+    six
+  ];
+
+  checkInputs = [
+    pytestCheckHook
+  ];
 
   # iterable = range(10 ** 10)  # Is efficiently reversible
   # OverflowError: Python int too large to convert to C long
   doCheck = !stdenv.hostPlatform.is32bit;
 
-  meta = {
+  meta = with lib; {
     homepage = "https://more-itertools.readthedocs.org";
     changelog = "https://more-itertools.readthedocs.io/en/stable/versions.html";
     description = "Expansion of the itertools module";
-    license = lib.licenses.mit;
+    license = licenses.mit;
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/development/python-modules/moto/default.nix b/pkgs/development/python-modules/moto/default.nix
index fc0e613b24958..52c0b6a250b29 100644
--- a/pkgs/development/python-modules/moto/default.nix
+++ b/pkgs/development/python-modules/moto/default.nix
@@ -36,14 +36,14 @@
 
 buildPythonPackage rec {
   pname = "moto";
-  version = "3.1.11";
+  version = "3.1.16";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-GwxHL0t0AXdakuY/vPomESoA4Ie59u3aEiAqOcYsYYE=";
+    sha256 = "sha256-y+itipSfUZdx5dJbZwc4YEdX+2fNR0110UwgZ3WC6B8=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/motor/default.nix b/pkgs/development/python-modules/motor/default.nix
index b759368174262..030b22a723e2d 100644
--- a/pkgs/development/python-modules/motor/default.nix
+++ b/pkgs/development/python-modules/motor/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "motor";
-  version = "2.5.1";
+  version = "3.0.0";
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "mongodb";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-r+HyIEC+Jafn7eMqkAldsZ5hbem+n+P76RJGAymmBks=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-xq3EpTncnMskn3aJdLAtD/kKhn/cS2nrLrVliyh2z28=";
   };
 
   propagatedBuildInputs = [ pymongo ];
diff --git a/pkgs/development/python-modules/multiprocess/default.nix b/pkgs/development/python-modules/multiprocess/default.nix
index 491aa131bb592..8558706485c26 100644
--- a/pkgs/development/python-modules/multiprocess/default.nix
+++ b/pkgs/development/python-modules/multiprocess/default.nix
@@ -6,14 +6,14 @@
 
 buildPythonPackage rec {
   pname = "multiprocess";
-  version = "0.70.12.2";
+  version = "0.70.13";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "uqfoundation";
     repo = pname;
-    rev = "multiprocess-${version}";
-    sha256 = "1npikdgj0qriqj384vg22qgq2xqylypk67sx1qfmdzvk6c4iyg0w";
+    rev = "refs/tags/multiprocess-${version}";
+    sha256 = "sha256-L/PesvaidavDEgJGqBxwcCYtG9TlKSwaxrUMJ+XVFOM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/napari-npe2/default.nix b/pkgs/development/python-modules/napari-npe2/default.nix
index 0fd2c3e5e979a..4ca75cf0237c9 100644
--- a/pkgs/development/python-modules/napari-npe2/default.nix
+++ b/pkgs/development/python-modules/napari-npe2/default.nix
@@ -13,7 +13,7 @@
 
 let
   pname = "napari-npe2";
-  version = "0.3.0";
+  version = "0.5.1";
 in
 buildPythonPackage {
   inherit pname version;
@@ -23,8 +23,8 @@ buildPythonPackage {
   src = fetchFromGitHub {
     owner = "napari";
     repo = "npe2";
-    rev = "v${version}";
-    hash = "sha256-IyDUeztWQ8JWXDo//76iHzAlWWaZP6/0lwCh0eZAZsM=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-+tTJrtJFUGwOhFzWgA5cFVp458DGuPVkErN/5O2LHk4=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
diff --git a/pkgs/development/python-modules/napari/default.nix b/pkgs/development/python-modules/napari/default.nix
index 837936f17a0a6..a55d45bccce9b 100644
--- a/pkgs/development/python-modules/napari/default.nix
+++ b/pkgs/development/python-modules/napari/default.nix
@@ -28,15 +28,15 @@
 , wrapQtAppsHook
 }: mkDerivationWith buildPythonPackage rec {
   pname = "napari";
-  version = "0.4.15";
+  version = "0.4.16";
 
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "napari";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-52TDMU6box7TA26P0F9ZgPr8fyzYM646lPUfOektOuE=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-Fx3DoTIb2ev5wMP/gmprPIoxeF2f+Cbac6pnWB/zTTw=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
diff --git a/pkgs/development/python-modules/nbclassic/default.nix b/pkgs/development/python-modules/nbclassic/default.nix
index 2c062d3ff99ec..fc311125c1d0d 100644
--- a/pkgs/development/python-modules/nbclassic/default.nix
+++ b/pkgs/development/python-modules/nbclassic/default.nix
@@ -11,15 +11,15 @@
 
 buildPythonPackage rec {
   pname = "nbclassic";
-  version = "0.3.5";
+  version = "0.4.3";
   disabled = pythonOlder "3.6";
 
   # tests only on github
   src = fetchFromGitHub {
     owner = "jupyterlab";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "1d0x7nwsaw5qjw4iaylc2sxlpiq3hlg9sy3i2nh7sn3wckwl76lc";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-5sof5EOqzK7kNHSXp7eJl3ZagZRWF74e08ahqJId2Z8=";
   };
 
   propagatedBuildInputs = [ jupyter_server notebook ];
diff --git a/pkgs/development/python-modules/nbclient/default.nix b/pkgs/development/python-modules/nbclient/default.nix
index 84fe03be605b0..59cbd65b48f35 100644
--- a/pkgs/development/python-modules/nbclient/default.nix
+++ b/pkgs/development/python-modules/nbclient/default.nix
@@ -17,7 +17,7 @@
 
 let nbclient = buildPythonPackage rec {
   pname = "nbclient";
-  version = "0.6.3";
+  version = "0.6.6";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -26,7 +26,7 @@ let nbclient = buildPythonPackage rec {
     owner = "jupyter";
     repo = pname;
     rev = "refs/tags/v${version}";
-    hash = "sha256-ofyJNJeNkXbZ9qHLTuzJ13PgEXU9lDQ9NkT4nG/R8Ic=";
+    hash = "sha256-Rs4Jk4OtexB/NKM1Jo4cV87hBxXDlnX9X+4KO+pGb0E=";
   };
 
   propagatedBuildInputs = [ async_generator traitlets nbformat nest-asyncio jupyter-client ];
diff --git a/pkgs/development/python-modules/nbformat/default.nix b/pkgs/development/python-modules/nbformat/default.nix
index e110934fdd13a..e5185aa37f669 100644
--- a/pkgs/development/python-modules/nbformat/default.nix
+++ b/pkgs/development/python-modules/nbformat/default.nix
@@ -1,7 +1,8 @@
 { lib
 , buildPythonPackage
 , fetchPypi
-, pytest
+, fastjsonschema
+, pytestCheckHook
 , glibcLocales
 , ipython_genutils
 , traitlets
@@ -12,17 +13,17 @@
 
 buildPythonPackage rec {
   pname = "nbformat";
-  version = "5.2.0";
+  version = "5.4.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-k98LnGciHTj7lwxI9tNhgZpsOIKZoO8xcbu5Eu3+EyQ=";
+    sha256 = "sha256-RLpcpqy4DF1aUA8eW4Pt6MvjZNWklcTIz2Cq8bplZQE=";
   };
 
   LC_ALL="en_US.utf8";
 
-  checkInputs = [ pytest glibcLocales ];
-  propagatedBuildInputs = [ ipython_genutils traitlets testpath jsonschema jupyter_core ];
+  checkInputs = [ pytestCheckHook glibcLocales ];
+  propagatedBuildInputs = [ ipython_genutils traitlets testpath jsonschema jupyter_core fastjsonschema ];
 
   preCheck = ''
     mkdir tmp
diff --git a/pkgs/development/python-modules/nbsphinx/default.nix b/pkgs/development/python-modules/nbsphinx/default.nix
index 38234c1486e1f..ebba5c7b3f871 100644
--- a/pkgs/development/python-modules/nbsphinx/default.nix
+++ b/pkgs/development/python-modules/nbsphinx/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "nbsphinx";
-  version = "0.8.8";
+  version = "0.8.9";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b5090c824b330b36c2715065a1a179ad36526bff208485a9865453d1ddfc34ec";
+    sha256 = "sha256-St6GsqQfj0Hv0+qZ2uhMM2j+i6P4N9UMiBXOlCTFmU8=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/nbxmpp/default.nix b/pkgs/development/python-modules/nbxmpp/default.nix
index 68eebbada8aa5..1c4cc473bf479 100644
--- a/pkgs/development/python-modules/nbxmpp/default.nix
+++ b/pkgs/development/python-modules/nbxmpp/default.nix
@@ -25,6 +25,11 @@ buildPythonPackage rec {
     sha256 = "sha256-QnvV/sAxdl8V5nV1hk8sRrL6nn015dAy6cXAiy2Tmbs=";
   };
 
+  nativeBuildInputs = [
+    # required for pythonImportsCheck otherwise libsoup cannot be found
+    gobject-introspection
+  ];
+
   buildInputs = [
     precis-i18n
   ];
diff --git a/pkgs/development/python-modules/nest-asyncio/default.nix b/pkgs/development/python-modules/nest-asyncio/default.nix
index 384b6db360b95..faa015d85f312 100644
--- a/pkgs/development/python-modules/nest-asyncio/default.nix
+++ b/pkgs/development/python-modules/nest-asyncio/default.nix
@@ -5,13 +5,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.5.4";
+  version = "1.5.5";
   pname = "nest_asyncio";
   disabled = !(pythonAtLeast "3.5");
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f969f6013a16fadb4adcf09d11a68a4f617c6049d7af7ac2c676110169a63abd";
+    sha256 = "sha256-5EIpHNlCaYvmGYI6F6hqV1nqvh+GEwhHkN4Yn+nhbWU=";
   };
 
   # tests not packaged with source dist as of 1.3.2/1.3.2, and
diff --git a/pkgs/development/python-modules/netmiko/default.nix b/pkgs/development/python-modules/netmiko/default.nix
index 482c298a90e35..9686ae0f08818 100644
--- a/pkgs/development/python-modules/netmiko/default.nix
+++ b/pkgs/development/python-modules/netmiko/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "netmiko";
-  version = "4.1.0";
+  version = "4.1.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-VwUZdHr82WsEprB7rk5d62AwaCxzngftDgjeBZW4OWQ=";
+    sha256 = "sha256-ZSmxHaFm0wCarBEzp+7bL7r2EQxRm7tLT0j4ZdjarJo=";
   };
 
   buildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/networkx/default.nix b/pkgs/development/python-modules/networkx/default.nix
index 3fb08348c7ffa..3acf8cdf63859 100644
--- a/pkgs/development/python-modules/networkx/default.nix
+++ b/pkgs/development/python-modules/networkx/default.nix
@@ -11,12 +11,12 @@
 buildPythonPackage rec {
   pname = "networkx";
   # upgrade may break sage, please test the sage build or ping @timokau on upgrade
-  version = "2.8.2";
+  version = "2.8.4";
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-rpnJsNNeW0pizxz+oB5bNjPY0C9KDq1paFtufeW4Xqs=";
+    sha256 = "sha256-XlPwJ8DVZ88fiE27KDIk31JWROQ6/RFF1kydiKNYR2I=";
   };
 
   propagatedBuildInputs = [ decorator setuptools ];
diff --git a/pkgs/development/python-modules/nilearn/default.nix b/pkgs/development/python-modules/nilearn/default.nix
index 2494a446a8113..121b204d5c32b 100644
--- a/pkgs/development/python-modules/nilearn/default.nix
+++ b/pkgs/development/python-modules/nilearn/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "nilearn";
-  version = "0.9.0";
+  version = "0.9.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-+cjjCt71FImRCux3JLVpneF4Qn065jhz2tmyPdMh/nY=";
+    sha256 = "sha256-3YIbT/KzuH9eSwNOoPlfzkN1rOWG3o7Rfmpme94ZJdc=";
   };
 
   checkInputs = [ pytestCheckHook ];
diff --git a/pkgs/development/python-modules/nipype/default.nix b/pkgs/development/python-modules/nipype/default.nix
index 68a544c9ab07c..42d05d24775bc 100644
--- a/pkgs/development/python-modules/nipype/default.nix
+++ b/pkgs/development/python-modules/nipype/default.nix
@@ -49,12 +49,12 @@ in
 
 buildPythonPackage rec {
   pname = "nipype";
-  version = "1.7.0";
+  version = "1.8.3";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e689fe2e5049598c9cd3708e8df1cac732fa1a88696f283e3bc0a70fecb8ab51";
+    sha256 = "sha256-Z/qa0NotxWFzweFHRm/MbJImivV8AZl68yiQ1jNvcAQ=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/nplusone/default.nix b/pkgs/development/python-modules/nplusone/default.nix
index 898d209d91381..13e0d28a3017a 100644
--- a/pkgs/development/python-modules/nplusone/default.nix
+++ b/pkgs/development/python-modules/nplusone/default.nix
@@ -3,7 +3,7 @@
 , buildPythonPackage
 , fetchFromGitHub
 , flake8
-, flask_sqlalchemy
+, flask-sqlalchemy
 , isPy27
 , mock
 , peewee
@@ -33,7 +33,7 @@ buildPythonPackage rec {
 
   checkInputs = [
     flake8
-    flask_sqlalchemy
+    flask-sqlalchemy
     mock
     peewee
     pytest-django
diff --git a/pkgs/development/python-modules/numba-scipy/default.nix b/pkgs/development/python-modules/numba-scipy/default.nix
index 69e6861329aaa..cd01bce1d1350 100644
--- a/pkgs/development/python-modules/numba-scipy/default.nix
+++ b/pkgs/development/python-modules/numba-scipy/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "numba-scipy";
-  version = "0.3.0";
+  version = "0.3.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-qJeoWiG1LdtFB9cME1d8xVaC0BXGDJEYjCOEdHvSkmQ=";
+    hash = "sha256-cApTGH5GJZH/RbkRjKhL3injvixD5kvfaS49FjrPA2U=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/numba/default.nix b/pkgs/development/python-modules/numba/default.nix
index a9c152f412f81..9953ddec36904 100644
--- a/pkgs/development/python-modules/numba/default.nix
+++ b/pkgs/development/python-modules/numba/default.nix
@@ -34,10 +34,10 @@ in buildPythonPackage rec {
   postPatch = ''
     # numpy
     substituteInPlace setup.py \
-      --replace "1.22" "2"
+      --replace "1.23" "2"
 
     substituteInPlace numba/__init__.py \
-      --replace "(1, 21)" "(2, 0)"
+      --replace "(1, 22)" "(2, 0)"
   '';
 
   NIX_CFLAGS_COMPILE = lib.optionalString stdenv.isDarwin "-I${lib.getDev libcxx}/include/c++/v1";
diff --git a/pkgs/development/python-modules/numcodecs/default.nix b/pkgs/development/python-modules/numcodecs/default.nix
index 04e4cd77baf22..438a54127a078 100644
--- a/pkgs/development/python-modules/numcodecs/default.nix
+++ b/pkgs/development/python-modules/numcodecs/default.nix
@@ -13,12 +13,12 @@
 
 buildPythonPackage rec {
   pname = "numcodecs";
-  version = "0.9.1";
+  version = "0.10.0";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "35adbcc746b95e3ac92e949a161811f5aa2602b9eb1ef241b5ea6f09bb220997";
+    sha256 = "sha256-LdQlZOd3KpOFkjsCo2Pjzt8FPOkwlKkGRIXn9ppvHJI=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/numpy/default.nix b/pkgs/development/python-modules/numpy/default.nix
index a163ef6449a98..68add2cdc26c8 100644
--- a/pkgs/development/python-modules/numpy/default.nix
+++ b/pkgs/development/python-modules/numpy/default.nix
@@ -6,6 +6,7 @@
 , gfortran
 , hypothesis
 , pytest
+, typing-extensions
 , blas
 , lapack
 , writeTextFile
@@ -44,15 +45,15 @@ in buildPythonPackage rec {
   # Attention! v1.22.0 breaks scipy and by extension scikit-learn, so
   # build both to verify they don't break.
   # https://github.com/scipy/scipy/issues/15414
-  version = "1.21.6";
+  version = "1.23.1";
 
   format = "pyproject.toml";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    extension = "zip";
-    sha256 = "sha256-7LVSUROXBmaf3sL/BzyY746ahEc+UecWIRtBqg8Y5lY=";
+    extension = "tar.gz";
+    hash = "sha256-10jvNJv+8uEZS1naN+1aKcGeqNfmNCAZkhuiuk/YtiQ=";
   };
 
   patches = lib.optionals python.hasDistutilsCxxPatch [
@@ -83,6 +84,7 @@ in buildPythonPackage rec {
   checkInputs = [
     pytest
     hypothesis
+    typing-extensions
   ];
 
   checkPhase = ''
diff --git a/pkgs/development/python-modules/numpydoc/default.nix b/pkgs/development/python-modules/numpydoc/default.nix
index b770ac26fbd7f..9eebc8c39a481 100644
--- a/pkgs/development/python-modules/numpydoc/default.nix
+++ b/pkgs/development/python-modules/numpydoc/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "numpydoc";
-  version = "1.2.1";
+  version = "1.4.0";
   format = "setuptools";
 
   disabled = isPy27;
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit pname;
     inherit version;
-    sha256 = "sha256-fOgm7Q1Uw/3JCXmSqNc6TUWdxGhhE1HGjkRP7ESkWvY=";
+    sha256 = "sha256-lJTa8cdhL1mQX6CeZcm4qQu6yzgE2R96lOd4gx5vz6U=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/nunavut/default.nix b/pkgs/development/python-modules/nunavut/default.nix
index 4cfce289917af..117d5cfdd14f5 100644
--- a/pkgs/development/python-modules/nunavut/default.nix
+++ b/pkgs/development/python-modules/nunavut/default.nix
@@ -9,13 +9,13 @@
 
  buildPythonPackage rec {
   pname = "nunavut";
-  version = "1.7.5";
+  version = "1.8.3";
 
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-4wZfj2C6aUNqHaA00KiiXbKOMf/XBSD0N2+9c++e0K8=";
+    sha256 = "sha256-JI+0IpQWikE6vXfpZHWsVjx3JPaVJ/f4oAjTSNs1Wuk=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/oci/default.nix b/pkgs/development/python-modules/oci/default.nix
index 879a317469e20..205cd78757e43 100644
--- a/pkgs/development/python-modules/oci/default.nix
+++ b/pkgs/development/python-modules/oci/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "oci";
-  version = "2.63.0";
+  version = "2.75.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -21,8 +21,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "oracle";
     repo = "oci-python-sdk";
-    rev = "v${version}";
-    hash = "sha256-EIn7BRXsVf7R2ij8iK3hrNWnLehxKDBlk96lAhFh0xw=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-dr95RHM8h2JIqkaey7E9DzbTLfLlCCUL1ZmTIH4mBRw=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/omegaconf/default.nix b/pkgs/development/python-modules/omegaconf/default.nix
index 14fc824f5cd8e..71a3d366ebfa0 100644
--- a/pkgs/development/python-modules/omegaconf/default.nix
+++ b/pkgs/development/python-modules/omegaconf/default.nix
@@ -3,15 +3,15 @@
 
 buildPythonPackage rec {
   pname = "omegaconf";
-  version = "2.1.1";
+  version = "2.2.2";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "omry";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0hh6pk4q6nb94bz9rwa6cysf3nj50rmqkjh34pqkh28nzg44afjw";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-bUJ80sa2ot2JSkt29eFwSiKL6R1X1+VVeE9dFIy4Mg0=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/onlykey-solo-python/default.nix b/pkgs/development/python-modules/onlykey-solo-python/default.nix
index d8030a892a56f..b3f21afdaddfe 100644
--- a/pkgs/development/python-modules/onlykey-solo-python/default.nix
+++ b/pkgs/development/python-modules/onlykey-solo-python/default.nix
@@ -13,13 +13,19 @@
 
 buildPythonPackage rec {
   pname = "onlykey-solo-python";
-  version = "0.0.28";
+  version = "0.0.32";
+  format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-Mbi5So2OgeXjg4Fzg7v2gAJuh1Y7ZCYu8Lrha/7PQfY=";
+    sha256 = "sha256-88DuhgX4FCwzIKzw4RqWgMtjRdf5huVlKEHAAEminuQ=";
   };
 
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "fido2 == 0.9.3" "fido2"
+  '';
+
   patches = [
     # https://github.com/trustcrypto/onlykey-solo-python/pull/2
     (fetchpatch {
diff --git a/pkgs/development/python-modules/onnx/default.nix b/pkgs/development/python-modules/onnx/default.nix
index 377521bb2f878..d5db23bc2b0b8 100644
--- a/pkgs/development/python-modules/onnx/default.nix
+++ b/pkgs/development/python-modules/onnx/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "onnx";
-  version = "1.11.0";
+  version = "1.12.0";
   format = "setuptools";
 
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-7KIkx8LI7kByoHQ+SJioSpvfgpe15ZEKJjLkxBgv+yo=";
+    sha256 = "sha256-E7PnfSdSO52/TzDfyclZRVhZ1eNOkhxE9xLWm4Np7/k=";
   };
 
   nativeBuildInputs = [
@@ -47,8 +47,8 @@ buildPythonPackage rec {
     patchShebangs tools/protoc-gen-mypy.py
     substituteInPlace tools/protoc-gen-mypy.sh.in \
       --replace "/bin/bash" "${bash}/bin/bash"
-    substituteInPlace setup.py \
-      --replace "setup_requires.append('pytest-runner')" ""
+
+    sed -i '/pytest-runner/d' setup.py
   '';
 
   preBuild = ''
diff --git a/pkgs/development/python-modules/openapi-schema-validator/default.nix b/pkgs/development/python-modules/openapi-schema-validator/default.nix
index ced5f8ed68b8a..c32b851901917 100644
--- a/pkgs/development/python-modules/openapi-schema-validator/default.nix
+++ b/pkgs/development/python-modules/openapi-schema-validator/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "openapi-schema-validator";
-  version = "0.2.3";
+  version = "0.3.0";
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "p1c2u";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-rgl2B55dnbpZszr+gWM0FgeXMKfrkDG7HeZBSw5Eles=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-Ms00nR3dpJ0hGtHvVa5B29dasYtBP8igxrgMm0NiArc=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/openapi-spec-validator/default.nix b/pkgs/development/python-modules/openapi-spec-validator/default.nix
index 7ef70ab3d3ff8..2edd464196547 100644
--- a/pkgs/development/python-modules/openapi-spec-validator/default.nix
+++ b/pkgs/development/python-modules/openapi-spec-validator/default.nix
@@ -1,8 +1,19 @@
-{ lib, buildPythonPackage, isPy27, fetchPypi
-, jsonschema, openapi-schema-validator, pyyaml, six, pathlib
-, mock, pytest, pytest-cov, pytest-flake8, tox, setuptools
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
 , poetry-core
+
+# propagates
+, jsonschema
+, openapi-schema-validator
+, pyyaml
+
+# optional
 , requests
+
+# tests
+, mock
+, pytestCheckHook
 }:
 
 buildPythonPackage rec {
@@ -10,17 +21,52 @@ buildPythonPackage rec {
   version = "0.4.0";
   format = "pyproject";
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "sha256-l/JYhQr8l7BI98JlOFXg+I+masEDwr5Qd8eWCsoq1Jo=";
+  # no tests via pypi sdist
+  src = fetchFromGitHub {
+    owner = "p1c2u";
+    repo = pname;
+    rev = version;
+    hash = "sha256-mGgHlDZTUo72RNZ/448gkGdza4EntYU9YoBpSKDUCeA=";
   };
 
-  nativeBuildInputs = [ poetry-core ];
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace 'openapi-schema-validator = "^0.2.0"' 'openapi-schema-validator = "*"'
+  '';
+
+  nativeBuildInputs = [
+    poetry-core
+  ];
+
+  propagatedBuildInputs = [
+    jsonschema
+    openapi-schema-validator
+    pyyaml
+  ];
+
+  passthru.optional-dependencies.requests = [
+    requests
+  ];
+
+  preCheck = ''
+    sed -i '/--cov/d' pyproject.toml
+  '';
+
+  checkInputs = [
+    pytestCheckHook
+  ];
 
-  propagatedBuildInputs = [ jsonschema openapi-schema-validator pyyaml six setuptools requests ]
-    ++ (lib.optionals (isPy27) [ pathlib ]);
+  disabledTests = [
+    # network access
+    "test_default_valid"
+    "test_urllib_valid"
+    "test_valid"
+  ];
 
-  checkInputs = [ mock pytest pytest-cov pytest-flake8 tox ];
+  pythonImportsCheck = [
+    "openapi_spec_validator"
+    "openapi_spec_validator.readers"
+  ];
 
   meta = with lib; {
     homepage = "https://github.com/p1c2u/openapi-spec-validator";
diff --git a/pkgs/development/python-modules/openpyxl/default.nix b/pkgs/development/python-modules/openpyxl/default.nix
index 83401436bcf7a..8afc16f86d438 100644
--- a/pkgs/development/python-modules/openpyxl/default.nix
+++ b/pkgs/development/python-modules/openpyxl/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "openpyxl";
-  version = "3.0.9";
+  version = "3.0.10";
   disabled = isPy27; # 2.6.4 was final python2 release
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "40f568b9829bf9e446acfffce30250ac1fa39035124d55fc024025c41481c90f";
+    sha256 = "sha256-5HgFYnrrz4YO207feYexMJwbNjLzdQU47ZYrvMO9dEk=";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/optax/default.nix b/pkgs/development/python-modules/optax/default.nix
index 42541d9078cfd..b04c1549b4e16 100644
--- a/pkgs/development/python-modules/optax/default.nix
+++ b/pkgs/development/python-modules/optax/default.nix
@@ -15,7 +15,7 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "deepmind";
     repo = pname;
-    rev = "v${version}";
+    rev = "refs/tags/v${version}";
     hash = "sha256-XAYztMBQpLBHNuNED/iodbwIMJSN/0GxdmTGQ5jD9Ws=";
   };
 
diff --git a/pkgs/development/python-modules/optuna/default.nix b/pkgs/development/python-modules/optuna/default.nix
index 6dde9ededb50f..1236a24628ec3 100644
--- a/pkgs/development/python-modules/optuna/default.nix
+++ b/pkgs/development/python-modules/optuna/default.nix
@@ -30,14 +30,14 @@
 
 buildPythonPackage rec {
   pname = "optuna";
-  version = "2.10.0";
+  version = "2.10.1";
   disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "optuna";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0fha0pwxq6n3mbpvpz3vk8hh61zqncj5cnq063kzfl5d8rd48vcd";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-HHVEoLCZtEJEfc4xYobQrzRcDDxxeQjgL2Rw2KeVbi0=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/orjson/default.nix b/pkgs/development/python-modules/orjson/default.nix
index d639f65672938..831d24fc73e04 100644
--- a/pkgs/development/python-modules/orjson/default.nix
+++ b/pkgs/development/python-modules/orjson/default.nix
@@ -4,6 +4,7 @@
 , rustPlatform
 , fetchFromGitHub
 , buildPythonPackage
+, cffi
 , libiconv
 , numpy
 , psutil
@@ -15,28 +16,30 @@
 
 buildPythonPackage rec {
   pname = "orjson";
-  version = "3.6.7";
+  version = "3.7.8";
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "ijl";
     repo = pname;
     rev = version;
-    sha256 = "1a55f1ipii7hg42bvsii053xczbgwwv8w6wgdb14qyirm5c9szd3";
+    hash = "sha256-K/hLNzwwEeGN6S33Xkfh+ocDHmTmh6yZYcN4vxaAvoQ=";
   };
 
   cargoDeps = rustPlatform.fetchCargoTarball {
     inherit src;
     name = "${pname}-${version}";
-    sha256 = "1piy0b1gh56n8srzhyd1n971a6pqpgmwhr4v9a81wg0xkbva8gdk";
+    hash = "sha256-kwZg1bC1O6XBI5HBgzahph/0k/RUKEkFIQMMuA1xe4w=";
   };
 
   format = "pyproject";
 
-  nativeBuildInputs = with rustPlatform; [
+  nativeBuildInputs = [
+    cffi
+  ] ++ (with rustPlatform; [
     cargoSetupHook
     maturinBuildHook
-  ];
+  ]);
 
   buildInputs = lib.optionals stdenv.isDarwin [ libiconv ];
 
diff --git a/pkgs/development/python-modules/oslo-config/default.nix b/pkgs/development/python-modules/oslo-config/default.nix
index f7e09692945a7..abdafc4481b35 100644
--- a/pkgs/development/python-modules/oslo-config/default.nix
+++ b/pkgs/development/python-modules/oslo-config/default.nix
@@ -14,12 +14,12 @@
 
 buildPythonPackage rec {
   pname = "oslo-config";
-  version = "8.8.0";
+  version = "9.0.0";
 
   src = fetchPypi {
     pname = "oslo.config";
     inherit version;
-    sha256 = "sha256-lpM9MBHa4VYIoRYWv7ANlH4i2jywm2/zfd11dqvUdkw=";
+    sha256 = "sha256-O2tjxDzx4JNEuoULyxHW8rkgEIb76wqXqJUOfqw/JkU=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/oslo-db/default.nix b/pkgs/development/python-modules/oslo-db/default.nix
index c675848f38b13..7a393e69e741d 100644
--- a/pkgs/development/python-modules/oslo-db/default.nix
+++ b/pkgs/development/python-modules/oslo-db/default.nix
@@ -16,12 +16,12 @@
 
 buildPythonPackage rec {
   pname = "oslo-db";
-  version = "11.3.0";
+  version = "12.0.0";
 
   src = fetchPypi {
     pname = "oslo.db";
     inherit version;
-    sha256 = "sha256-CSlZI05V8p+lCgjPcG6LZi4y2nVNrFhjI95TDM/WJnM=";
+    sha256 = "sha256-EFuxQWOk7GG85z+N8ZADLIdZiJuA8B1ZrsdwR+cN24c=";
   };
 
   nativeBuildInputs = [ pbr ];
diff --git a/pkgs/development/python-modules/oslo-serialization/default.nix b/pkgs/development/python-modules/oslo-serialization/default.nix
index e59258dda782e..4b33bb06dc10d 100644
--- a/pkgs/development/python-modules/oslo-serialization/default.nix
+++ b/pkgs/development/python-modules/oslo-serialization/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "oslo-serialization";
-  version = "4.3.0";
+  version = "5.0.0";
 
   src = fetchPypi {
     pname = "oslo.serialization";
     inherit version;
-    sha256 = "sha256-OqRy9DSu6LvMByUxK39AmqH6VLvBNJBBJM9JsOhrkRU=";
+    sha256 = "sha256-KEUyjQ9H3Ioj/tKoIlPpCs/wqnMdvSTzec+OUObMZro=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/oslo-utils/default.nix b/pkgs/development/python-modules/oslo-utils/default.nix
index 25bc4706f0de9..45e400856ba7b 100644
--- a/pkgs/development/python-modules/oslo-utils/default.nix
+++ b/pkgs/development/python-modules/oslo-utils/default.nix
@@ -23,12 +23,12 @@
 
 buildPythonPackage rec {
   pname = "oslo-utils";
-  version = "4.13.0";
+  version = "6.0.0";
 
   src = fetchPypi {
     pname = "oslo.utils";
     inherit version;
-    sha256 = "sha256-RbqKql7QVqjo5GBZ75PVwte5yZvHSA42HPV4Pkfyj7o=";
+    sha256 = "sha256-CpLiTESWht7CgAlXZr4+uOV/EyXNpMbyEpVBVk5ei6g=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/outcome/default.nix b/pkgs/development/python-modules/outcome/default.nix
index f03307ead1479..0150f1f5a2aa9 100644
--- a/pkgs/development/python-modules/outcome/default.nix
+++ b/pkgs/development/python-modules/outcome/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "outcome";
-  version = "1.1.0";
+  version = "1.2.0";
   disabled = pythonOlder "3.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e862f01d4e626e63e8f92c38d1f8d5546d3f9cce989263c521b2e7990d186967";
+    sha256 = "sha256-b4K9PeRdowPPH3ceyvoWM3UKNYQ2qLtg4Goc63RdJnI=";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/owslib/default.nix b/pkgs/development/python-modules/owslib/default.nix
index 07c6bfedbb2c2..10e7580af6161 100644
--- a/pkgs/development/python-modules/owslib/default.nix
+++ b/pkgs/development/python-modules/owslib/default.nix
@@ -1,13 +1,19 @@
 { lib, buildPythonPackage, fetchPypi, python-dateutil, requests, pytz, pyproj , pytest, pyyaml } :
 buildPythonPackage rec {
   pname = "OWSLib";
-  version = "0.25.0";
+  version = "0.26.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "20d79bce0be10277caa36f3134826bd0065325df0301a55b2c8b1c338d8d8f0a";
+    sha256 = "sha256-jEywYzjrZAXCrs7QttCFaCqmHw8uUo8ceI1o3FDflBs=";
   };
 
+  # as now upstream https://github.com/geopython/OWSLib/pull/824
+  postPatch = ''
+    substituteInPlace requirements.txt \
+      --replace 'pyproj ' 'pyproj #'
+  '';
+
   buildInputs = [ pytest ];
   propagatedBuildInputs = [ python-dateutil pyproj pytz requests pyyaml ];
 
diff --git a/pkgs/development/python-modules/p1monitor/default.nix b/pkgs/development/python-modules/p1monitor/default.nix
index 7a8bc9fd050ba..d1be6e639b385 100644
--- a/pkgs/development/python-modules/p1monitor/default.nix
+++ b/pkgs/development/python-modules/p1monitor/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "p1monitor";
-  version = "1.1.0";
+  version = "2.0.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.9";
@@ -20,8 +20,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "klaasnicolaas";
     repo = "python-p1monitor";
-    rev = "v${version}";
-    hash = "sha256-X8by8qVcLEs5xrb4LjNeGomlmERAYYplo3Yqgh9lKrI=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-0CPOK577tl86orjN9Xou8dPm425Yx1m8x6xfHaZEv10=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pandas/default.nix b/pkgs/development/python-modules/pandas/default.nix
index dad1d4499ef73..2c4f20478339a 100644
--- a/pkgs/development/python-modules/pandas/default.nix
+++ b/pkgs/development/python-modules/pandas/default.nix
@@ -27,12 +27,12 @@
 
 buildPythonPackage rec {
   pname = "pandas";
-  version = "1.4.2";
+  version = "1.4.3";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-krwfxYXxRjyoJ7RVNZV4FbfeshjFSbfBhALDIsdUmhI=";
+    sha256 = "sha256-L/d4hGjnWRdXTwgM1GgbJ+GnvzZGH+lotJqHtaVNAHw=";
   };
 
   nativeBuildInputs = [ cython ];
diff --git a/pkgs/development/python-modules/papis/default.nix b/pkgs/development/python-modules/papis/default.nix
index d117c8eb8db62..b33f65bad5c46 100644
--- a/pkgs/development/python-modules/papis/default.nix
+++ b/pkgs/development/python-modules/papis/default.nix
@@ -32,7 +32,7 @@
 
 buildPythonPackage rec {
   pname = "papis";
-  version = "0.11.1";
+  version = "0.12";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -40,8 +40,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "papis";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-hlokGoXBhxkAMbqohztZEWlPBSSAUIAGuHtrF7iXcy0=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-WKsU/5LXqXiFpWyTZGpvZn4lyANPosbvuhYH3opbBRs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pathos/default.nix b/pkgs/development/python-modules/pathos/default.nix
index 144d5aad60cfa..9c6dd62566063 100644
--- a/pkgs/development/python-modules/pathos/default.nix
+++ b/pkgs/development/python-modules/pathos/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "pathos";
-  version = "0.2.8";
+  version = "0.2.9";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -18,8 +18,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "uqfoundation";
     repo = pname;
-    rev = "${pname}-${version}";
-    sha256 = "sha256-71hMaG+3FbWMtGqwcDOZ8uit0DsHEoc9H2GXfX7TeoM=";
+    rev = "refs/tags/pathos-${version}";
+    sha256 = "sha256-39D+itH0nkOzmh3Rpg/HXLRj2F1UPsys+iU0ZiodkM0=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pdfposter/default.nix b/pkgs/development/python-modules/pdfposter/default.nix
index 00cfea5cc9b00..d1a663dc87d93 100644
--- a/pkgs/development/python-modules/pdfposter/default.nix
+++ b/pkgs/development/python-modules/pdfposter/default.nix
@@ -2,13 +2,13 @@
 
 buildPythonPackage rec {
   pname = "pdftools.pdfposter";
-  version = "0.7.post1";
+  version = "0.8";
 
   propagatedBuildInputs = [ pypdf2 ];
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0c1avpbr9q53yzq5ar2x485rmp9d0l3z27aham32bg7gplzd7w0j";
+    sha256 = "sha256-SYEn54kpO6KQ8ywpgu0+3uL+Ilr1hsfSornWrs2EBqQ=";
   };
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/pdm-pep517/default.nix b/pkgs/development/python-modules/pdm-pep517/default.nix
index 1b988b1f67ab7..9cfe5a5e9244d 100644
--- a/pkgs/development/python-modules/pdm-pep517/default.nix
+++ b/pkgs/development/python-modules/pdm-pep517/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "pdm-pep517";
-  version = "0.12.5";
+  version = "1.0.2";
   format = "pyproject";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-z9FeVJhXkYa9wKGntu6p+YPnw6fdGip7CtItBdbcUJk=";
+    sha256 = "sha256-nVoqpYlvNzN1UJeUXsKnUc0Z7jOZMG4JlRQBSx5JrfE=";
   };
 
   preCheck = ''
diff --git a/pkgs/development/python-modules/peewee/default.nix b/pkgs/development/python-modules/peewee/default.nix
index 65e1fdd0af5e3..86fcd3948a6c7 100644
--- a/pkgs/development/python-modules/peewee/default.nix
+++ b/pkgs/development/python-modules/peewee/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "peewee";
-  version = "3.15.0";
+  version = "3.15.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -23,8 +23,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "coleifer";
     repo = pname;
-    rev = version;
-    hash = "sha256-nmqq1RJzHZKp6f0RAxuUAejy04vsupV0IH8dHXM/WVw=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-2rxGOUCITEHuM83qhaKQGK4jSf4r8hcBAGxRImT/rhE=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/pelican/default.nix b/pkgs/development/python-modules/pelican/default.nix
index 9f11251ea8a81..d197e03617d1a 100644
--- a/pkgs/development/python-modules/pelican/default.nix
+++ b/pkgs/development/python-modules/pelican/default.nix
@@ -28,14 +28,14 @@
 
 buildPythonPackage rec {
   pname = "pelican";
-  version = "4.7.2";
+  version = "4.8.0";
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "getpelican";
     repo = pname;
-    rev = version;
-    hash = "sha256-ZBGzsyCtFt5uj9mpOpGdTzGJET0iwOAgDTy80P6anRU=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-N8/gxBrRdYPoP8B8nQp/3ma170yhz/KxQaaEhlypGys=";
     # Remove unicode file names which leads to different checksums on HFS+
     # vs. other filesystems because of unicode normalisation.
     postFetch = ''
diff --git a/pkgs/development/python-modules/pep8-naming/default.nix b/pkgs/development/python-modules/pep8-naming/default.nix
index 8c386dde9a3ad..248961d7f0408 100644
--- a/pkgs/development/python-modules/pep8-naming/default.nix
+++ b/pkgs/development/python-modules/pep8-naming/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "pep8-naming";
-  version = "0.13.0";
+  version = "0.13.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-nzjm3Phnoft61H9f9ywN2uVEps9k6592ALezwLtZgLU=";
+    sha256 = "sha256-Ovd82qnHll98haVs1Xk1RVPJu9P98weKd28S21TdaUQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/perfplot/default.nix b/pkgs/development/python-modules/perfplot/default.nix
index a2bb6baec9694..1c8cdf4421bf6 100644
--- a/pkgs/development/python-modules/perfplot/default.nix
+++ b/pkgs/development/python-modules/perfplot/default.nix
@@ -14,15 +14,15 @@
 
 buildPythonPackage rec {
   pname = "perfplot";
-  version = "0.10.1";
+  version = "0.10.2";
   format = "pyproject";
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "nschloe";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-5qZolEJWjhqk1JakcGBWZ1hxeP1cLqcB7IZ3ufjOC/o=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-bu6eYQukhLE8sLkS3PbqTgXOqJFXJYXTcXAhmjaq48g=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/persisting-theory/default.nix b/pkgs/development/python-modules/persisting-theory/default.nix
index 6859b6264a8f6..17d210f4006d9 100644
--- a/pkgs/development/python-modules/persisting-theory/default.nix
+++ b/pkgs/development/python-modules/persisting-theory/default.nix
@@ -1,22 +1,26 @@
-{ lib, buildPythonPackage, fetchPypi
-, nose
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "persisting-theory";
-  version = "0.2.1";
+  version = "1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "02hcg7js23yjyw6gwxqzvyv2b1wfjrypk98cfxfgf7s8iz67vzq0";
+    sha256 = "sha256-D4QPoiJHvKpRQJTafzsmxgI1lCmrEtLNiL4GtJozYpA=";
   };
 
-  checkInputs = [ nose ];
+  checkInputs = [
+    pytestCheckHook
+  ];
 
-  checkPhase = "nosetests";
+  pythonImportsCheck = [ "persisting_theory" ];
 
   meta = with lib; {
-    homepage = "https://code.eliotberriot.com/eliotberriot/persisting-theory";
+    homepage = "https://code.agate.blue/agate/persisting-theory";
     description = "Automate data discovering and access inside a list of packages";
     license = licenses.bsd3;
     maintainers = with maintainers; [ mmai ];
diff --git a/pkgs/development/python-modules/pgspecial/default.nix b/pkgs/development/python-modules/pgspecial/default.nix
index e7b4e62ab575d..b2f28a189e128 100644
--- a/pkgs/development/python-modules/pgspecial/default.nix
+++ b/pkgs/development/python-modules/pgspecial/default.nix
@@ -2,7 +2,7 @@
 , buildPythonPackage
 , fetchPypi
 , pytestCheckHook
-, psycopg2
+, psycopg
 , click
 , configobj
 , sqlparse
@@ -10,17 +10,17 @@
 
 buildPythonPackage rec {
   pname = "pgspecial";
-  version = "1.13.1";
+  version = "2.0.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-1dq5ZpCQgnWRbcLGIu+uIX8ULggWX6NmlJ1By8VlhwE=";
+    sha256 = "sha256-ZEQ7vJrQm1fQ9Ny7OO/0TVKFO3QYyepS9YV6vhu1NOw=";
   };
 
   propagatedBuildInputs = [
     click
     sqlparse
-    psycopg2
+    psycopg
   ];
 
   checkInputs = [
@@ -35,7 +35,8 @@ buildPythonPackage rec {
 
   meta = with lib; {
     description = "Meta-commands handler for Postgres Database";
-    homepage = "https://pypi.python.org/pypi/pgspecial";
+    homepage = "https://github.com/dbcli/pgspecial";
     license = licenses.bsd3;
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/development/python-modules/phonemizer/default.nix b/pkgs/development/python-modules/phonemizer/default.nix
index 3d7d21bbb97c7..550a4fefd25a5 100644
--- a/pkgs/development/python-modules/phonemizer/default.nix
+++ b/pkgs/development/python-modules/phonemizer/default.nix
@@ -15,11 +15,11 @@
 
 buildPythonApplication rec {
   pname = "phonemizer";
-  version = "3.1.1";
+  version = "3.2.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-PWVK0NLVa0Rx1xyUyQF2/RvUo3/geskn53FcEv0Jr0c=";
+    sha256 = "sha256-Bo+F+FqKmtxjijeHrqyvcaU+R1eLEtdzwJdDNQDNiSs=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/phonopy/default.nix b/pkgs/development/python-modules/phonopy/default.nix
index 3c45c602ae53c..06399b0b66169 100644
--- a/pkgs/development/python-modules/phonopy/default.nix
+++ b/pkgs/development/python-modules/phonopy/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "phonopy";
-  version = "2.13.1";
+  version = "2.15.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-D7pBtcMbxMpt4XJVYDkslRDU4Uyk83AtbIIztUbji6A=";
+    sha256 = "sha256-iXvAXFtN1wKfasJAGt4FC04Q9Ntr4U2euA61YIdwLz0=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pika/default.nix b/pkgs/development/python-modules/pika/default.nix
index 1c8cae9f041cd..a9791de651957 100644
--- a/pkgs/development/python-modules/pika/default.nix
+++ b/pkgs/development/python-modules/pika/default.nix
@@ -2,7 +2,7 @@
 , buildPythonPackage
 , fetchFromGitHub
 , gevent
-, nose
+, nose2
 , mock
 , twisted
 , tornado
@@ -10,33 +10,36 @@
 
 buildPythonPackage rec {
   pname = "pika";
-  version = "1.2.0";
+  version = "1.3.0";
+  format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "pika";
     repo = "pika";
-    rev = version;
-    sha256 = "sha256-Wog6Wxa8V/zv/bBrFOigZi6KE5qRf82bf1GK2XwvpDI=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-iWGqnDj8qhXUOTw8UNC7VHVBNyvMr4Kdk6NubX92KRI=";
   };
 
   propagatedBuildInputs = [ gevent tornado twisted ];
 
-  checkInputs = [ nose mock ];
+  checkInputs = [ nose2 mock ];
 
   postPatch = ''
     # don't stop at first test failure
     # don't run acceptance tests because they access the network
     # don't report test coverage
-    substituteInPlace setup.cfg \
+    substituteInPlace nose2.cfg \
       --replace "stop = 1" "stop = 0" \
       --replace "tests=tests/unit,tests/acceptance" "tests=tests/unit" \
       --replace "with-coverage = 1" "with-coverage = 0"
   '';
 
+  doCheck = false; # tests require rabbitmq instance, unsure how to skip
+
   checkPhase = ''
     runHook preCheck
 
-    PIKA_TEST_TLS=true nosetests
+    PIKA_TEST_TLS=true nose2 -v
 
     runHook postCheck
   '';
@@ -45,6 +48,6 @@ buildPythonPackage rec {
     description = "Pure-Python implementation of the AMQP 0-9-1 protocol";
     homepage = "https://pika.readthedocs.org";
     license = licenses.bsd3;
+    maintainers = with maintainers; [ ];
   };
-
 }
diff --git a/pkgs/development/python-modules/pint/default.nix b/pkgs/development/python-modules/pint/default.nix
index c5a9148f0e54e..b4e68c190946c 100644
--- a/pkgs/development/python-modules/pint/default.nix
+++ b/pkgs/development/python-modules/pint/default.nix
@@ -15,22 +15,21 @@
 
 buildPythonPackage rec {
   pname = "pint";
-  version = "0.18";
+  version = "0.19.2";
+
+  disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit version;
     pname = "Pint";
-    sha256 = "sha256-jEvOiEwmkFH+t6vGnb/RhAPAx2SryD2hMuinIi+LqAE=";
+    sha256 = "sha256-4dSYn/UQs3ja1k+RcR572r5cp411sGoYVprEVGeMS68=";
   };
 
-  disabled = pythonOlder "3.6";
-
   nativeBuildInputs = [ setuptools-scm ];
 
   propagatedBuildInputs = [ packaging ]
     ++ lib.optionals (pythonOlder "3.8") [ importlib-metadata ];
 
-  # Test suite explicitly requires pytest
   checkInputs = [
     pytestCheckHook
     pytest-subtests
@@ -38,13 +37,17 @@ buildPythonPackage rec {
     matplotlib
     uncertainties
   ];
+
   dontUseSetuptoolsCheck = true;
 
+  preCheck = ''
+    export HOME=$(mktemp -d)
+  '';
+
   meta = with lib; {
     description = "Physical quantities module";
     license = licenses.bsd3;
     homepage = "https://github.com/hgrecco/pint/";
     maintainers = with maintainers; [ costrouc doronbehar ];
   };
-
 }
diff --git a/pkgs/development/python-modules/pip-tools/default.nix b/pkgs/development/python-modules/pip-tools/default.nix
index 41e4edbb6ba9b..93eb848a6452b 100644
--- a/pkgs/development/python-modules/pip-tools/default.nix
+++ b/pkgs/development/python-modules/pip-tools/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "pip-tools";
-  version = "6.6.2";
+  version = "6.8.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-9jhQOp932Y2afXJYSxUI0/gu0Bm4+rJPTlrQeMG4yV4=";
+    hash = "sha256-Oeiu5GVEbgInjYDb69QyXR3YYzJI9DITxzol9Y59ilU=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pipx/default.nix b/pkgs/development/python-modules/pipx/default.nix
index 3f461b15a3f2a..fb0cef01705c3 100644
--- a/pkgs/development/python-modules/pipx/default.nix
+++ b/pkgs/development/python-modules/pipx/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pipx";
-  version = "1.0.0";
+  version = "1.1.0";
 
   disabled = pythonOlder "3.6";
 
@@ -19,8 +19,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "pipxproject";
     repo = pname;
-    rev = version;
-    sha256 = "1sgfrlhci2m83k436dfwfmqjpb8hij6yypm03pm3n8drmr2aaa4s";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-6cKKVOgHIoKNfGqvDWK5cwBGBDkgfyRuBRDV6fruBoA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pivy/default.nix b/pkgs/development/python-modules/pivy/default.nix
index d4aee75efe340..44d6094f461ab 100644
--- a/pkgs/development/python-modules/pivy/default.nix
+++ b/pkgs/development/python-modules/pivy/default.nix
@@ -7,8 +7,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "coin3d";
     repo = "pivy";
-    rev = version;
-    sha256 = "mU3QRDJd56gGDWqwcxAN3yUCkAkABP/I9gIBMH2MOXA=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-mU3QRDJd56gGDWqwcxAN3yUCkAkABP/I9gIBMH2MOXA=";
   };
 
   dontUseCmakeConfigure = true;
diff --git a/pkgs/development/python-modules/pkginfo/default.nix b/pkgs/development/python-modules/pkginfo/default.nix
index 21659f638a749..b3f4f1d450bfc 100644
--- a/pkgs/development/python-modules/pkginfo/default.nix
+++ b/pkgs/development/python-modules/pkginfo/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "pkginfo";
-  version = "1.8.2";
+  version = "1.8.3";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-VC4NC2dQ4uIcIBeYA+QKtQWY2AZtUQl6Djgsup6wK/8=";
+    sha256 = "sha256-qE2kMY3Yb4cKlEeoyYNAqgYha/xvK3vcS4dmmErhhnw=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/plotly/default.nix b/pkgs/development/python-modules/plotly/default.nix
index fc24a4c2e6f7f..79c7784e23bbf 100644
--- a/pkgs/development/python-modules/plotly/default.nix
+++ b/pkgs/development/python-modules/plotly/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "plotly";
-  version = "5.6.0";
+  version = "5.9.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-2G5E69449HU9/5gqubXgPPhyqrj99TpAPpme03gVQzE=";
+    sha256 = "sha256-sFNucrvAs88WmsH9AHWdd6rnuxKuN4zcdcXcNi9d5XY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/portalocker/default.nix b/pkgs/development/python-modules/portalocker/default.nix
index cd7d6d03bbd4c..2d57952de3ec9 100644
--- a/pkgs/development/python-modules/portalocker/default.nix
+++ b/pkgs/development/python-modules/portalocker/default.nix
@@ -5,12 +5,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "2.4.0";
+  version = "2.5.1";
   pname = "portalocker";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-pkitdhuOonNwy1kVNQEizYB7gg0hk+1cnMKPFj32N/Q=";
+    sha256 = "sha256-ro6cwmYNoEv0H6Gg7vfjALteSlhprfsabYVRYytVmys=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/portpicker/default.nix b/pkgs/development/python-modules/portpicker/default.nix
index a0ff0f8549730..b88bccfc534b7 100644
--- a/pkgs/development/python-modules/portpicker/default.nix
+++ b/pkgs/development/python-modules/portpicker/default.nix
@@ -7,14 +7,14 @@
 
 buildPythonPackage rec {
   pname = "portpicker";
-  version = "1.5.0";
+  version = "1.5.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-4TsUgAit6yeTz4tVvNIP3OxPdj8tO/PEX15eXR330ig=";
+    hash = "sha256-xVaDrXJfXACkG8fbAiUiPovgJLH6Vk0DntM5Dk/Uj7M=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/potentials/default.nix b/pkgs/development/python-modules/potentials/default.nix
index 2d602746815ee..9396a170ba1d8 100644
--- a/pkgs/development/python-modules/potentials/default.nix
+++ b/pkgs/development/python-modules/potentials/default.nix
@@ -20,7 +20,7 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.3.3";
+  version = "0.3.4";
   pname = "potentials";
   format = "setuptools";
 
@@ -28,7 +28,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-kj2RDls5ziCH+AF982h8TplZccwdcna3BQMoBXAbOHE=";
+    hash = "sha256-yBqU1FN2KlWE2Stg9OMdBLUfIQdbUGWCH4GU6r6HkDI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/powerline/default.nix b/pkgs/development/python-modules/powerline/default.nix
index 292c44cf58fad..de97627f6df4a 100644
--- a/pkgs/development/python-modules/powerline/default.nix
+++ b/pkgs/development/python-modules/powerline/default.nix
@@ -13,14 +13,14 @@
 # TODO: bzr support is missing because nixpkgs switched to `breezy`
 
 buildPythonPackage rec {
-  version  = "2.8.2";
+  version  = "2.8.3";
   pname = "powerline";
 
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
-    rev = version;
-    sha256 = "sha256-6V8ozl5KJQvytfflBmKJlIZQ5m3hkpCzMBtWZ2SzcQ0=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-UIx9/IZg6Wv596wHzQb0CO6zwmQXUaFEPKBojo2LXmA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/prance/default.nix b/pkgs/development/python-modules/prance/default.nix
index 26cfada4296e5..cefa13610081f 100644
--- a/pkgs/development/python-modules/prance/default.nix
+++ b/pkgs/development/python-modules/prance/default.nix
@@ -14,6 +14,7 @@
 buildPythonPackage rec {
   pname = "prance";
   version = "0.21.8.0";
+  format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "RonnyPfannschmidt";
@@ -23,6 +24,12 @@ buildPythonPackage rec {
     sha256 = "sha256-kGANMHfWwhW3ZBw2ZVCJZR/bV2EPhcydMKhDeDTVwcQ=";
   };
 
+  postPatch = ''
+    substituteInPlace setup.cfg \
+      --replace "--cov=prance --cov-report=term-missing --cov-fail-under=90" "" \
+      --replace "chardet>=3.0,<5.0" "chardet"
+  '';
+
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
 
   nativeBuildInputs = [
@@ -42,11 +49,6 @@ buildPythonPackage rec {
     openapi-spec-validator
   ];
 
-  postPatch = ''
-    substituteInPlace setup.cfg \
-      --replace "--cov=prance --cov-report=term-missing --cov-fail-under=90" ""
-  '';
-
   # Disable tests that require network
   disabledTestPaths = [
     "tests/test_convert.py"
diff --git a/pkgs/development/python-modules/prettytable/default.nix b/pkgs/development/python-modules/prettytable/default.nix
index 7c4afe4a72842..21e7a455da880 100644
--- a/pkgs/development/python-modules/prettytable/default.nix
+++ b/pkgs/development/python-modules/prettytable/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "prettytable";
-  version = "3.2.0";
+  version = "3.3.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-rn2WxkEAVD3GFmK0CijzsDwPlKUD7RIcb8ongsWBb4E=";
+    sha256 = "sha256-EY61T9J5QEm4EIk2U7IJUjSd9tO8F2Tn+s2KGAZPqbA=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/prompt-toolkit/default.nix b/pkgs/development/python-modules/prompt-toolkit/default.nix
index be90726e189bc..02b188d2fdaa7 100644
--- a/pkgs/development/python-modules/prompt-toolkit/default.nix
+++ b/pkgs/development/python-modules/prompt-toolkit/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "prompt-toolkit";
-  version = "3.0.28";
+  version = "3.0.30";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "prompt_toolkit";
     inherit version;
-    sha256 = "sha256-nxzRax6GwpaPJRnX+zHdnWaZFvUVYSwmnRTp7VK1FlA=";
+    sha256 = "sha256-hZsoPFC95F9fl4Kfd6RnTRwfzYhTk2Txsoo3gFz9icA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/protonvpn-nm-lib/default.nix b/pkgs/development/python-modules/protonvpn-nm-lib/default.nix
index 2d6ad894fa631..579a1570da7f1 100644
--- a/pkgs/development/python-modules/protonvpn-nm-lib/default.nix
+++ b/pkgs/development/python-modules/protonvpn-nm-lib/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "protonvpn-nm-lib";
-  version = "3.10.0";
+  version = "3.11.0";
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "ProtonVPN";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-WVIQ43J01BQzYhEPDHcoAmUvlsaDw0Z7yLQGajVdedU=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-kfOLhM0/jzHj+KlDrnCe571Bcmv8TvuAbXMpt3uR2L0=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/proxy-py/default.nix b/pkgs/development/python-modules/proxy-py/default.nix
index c5daba1958f01..bea708129872c 100644
--- a/pkgs/development/python-modules/proxy-py/default.nix
+++ b/pkgs/development/python-modules/proxy-py/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "proxy-py";
-  version = "2.4.0";
+  version = "2.4.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -22,8 +22,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "abhinavsingh";
     repo = "proxy.py";
-    rev = "v${version}";
-    sha256 = "sha256-VagX7ATVu6AT4POWoG9btizxFeBh9MLXiLpavtfXnyM=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-dA7a9RicBFCSf6IoGX/CdvI8x/xMOFfNtyuvFn9YmHI=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/psd-tools/default.nix b/pkgs/development/python-modules/psd-tools/default.nix
index a642d6ba10d13..ae5c3e0ab1afd 100644
--- a/pkgs/development/python-modules/psd-tools/default.nix
+++ b/pkgs/development/python-modules/psd-tools/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "psd-tools";
-  version = "1.9.18";
+  version = "1.9.21";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d7e510790512f0bb8150c508531c8681c3d9d0ea63b3ba9b11bbf0952cbd69a8";
+    sha256 = "sha256-BlfJnC03W0BEOr2Nav0Tj0fzjwAVlTPjyN0KmxxQMVI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/psycopg/default.nix b/pkgs/development/python-modules/psycopg/default.nix
new file mode 100644
index 0000000000000..4e140e5cceb3d
--- /dev/null
+++ b/pkgs/development/python-modules/psycopg/default.nix
@@ -0,0 +1,155 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, fetchpatch
+, fetchurl
+, pythonOlder
+, substituteAll
+
+# links (libpq)
+, postgresql
+
+# propagates
+, backports-zoneinfo
+, typing-extensions
+
+# docs
+, furo
+, shapely
+, sphinxHook
+, sphinx-autodoc-typehints
+
+# tests
+, pproxy
+, pytest-asyncio
+, pytest-randomly
+, pytestCheckHook
+}:
+
+let
+  pname = "psycopg";
+  version = "3.0.15";
+in
+
+buildPythonPackage {
+  inherit pname version;
+  format = "pyproject";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchFromGitHub {
+    owner = "psycopg";
+    repo = pname;
+    rev = version;
+    hash = "sha256-1Wtp0wDuS6dxa1+u6DXu9fDLU7OtgsCUdbdcO5nhkxU=";
+  };
+
+  outputs = [
+    "out"
+    "doc"
+  ];
+
+  sphinxRoot = "../docs";
+
+  # Introduce this file necessary for the docs build via environment var
+  LIBPQ_DOCS_FILE = fetchurl {
+    url = "https://raw.githubusercontent.com/postgres/postgres/REL_14_STABLE/doc/src/sgml/libpq.sgml";
+    hash = "sha256-yn09fR9+7zQni8SvTG7BUmYRD7MK7u2arVAznWz2oAw=";
+  };
+
+  patches = [
+    (substituteAll {
+      src = ./libpq.patch;
+      libpq = "${postgresql.lib}/lib/libpq.so";
+    })
+
+    # Work around docs build issues
+    # https://github.com/psycopg/psycopg/issues/337
+    (fetchpatch {
+      name = "sphinx-5.0-compat.patch";
+      url = "https://github.com/psycopg/psycopg/commit/ebff3a8392f002100d1e71d3deb94f27fb8cc0cf.patch";
+      hash = "sha256-QP9I6/xVJyWj5MQqWqxtmdBlesNUOwpYSMuzogJSnos=";
+    })
+    (fetchpatch {
+      name = "libpq-sqml-env-var.patch";
+      url = "https://github.com/psycopg/psycopg/commit/adf9cbdc1020abf87ae602fe0eb493c294459a93.patch";
+      hash = "sha256-HJ2Cx7Vg7PSitDEOqCUF7ehNU8aI+iFT886dk2wHsAI=";
+    })
+    (fetchpatch {
+      name = "avoid-dnspython-import-in-docs.patch";
+      url = "https://github.com/psycopg/psycopg/commit/3058421503b3fcbcf06382d558aac7b9ca2eaaec.patch";
+      hash = "sha256-D4vj5STafkQ34HWUyKZ3A9w9bY8holifPn3lsBjfVZA=";
+    })
+  ];
+
+  # only move to sourceRoot after patching, makes patching easier
+  postPatch = ''
+    cd ${pname}
+  '';
+
+  nativeBuildInputs = [
+    furo
+    shapely
+    sphinxHook
+    sphinx-autodoc-typehints
+  ];
+
+  propagatedBuildInputs = lib.optionals (pythonOlder "3.11") [
+    typing-extensions
+  ] ++ lib.optionals (pythonOlder "3.9") [
+    backports-zoneinfo
+  ];
+
+  pythonImportsCheck = [
+    "psycopg"
+  ];
+
+  passthru.optional-dependencies = {
+    # TODO: package remaining variants
+    #c = [ psycopg-c ];
+    #pool = [ psycopg-pool ];
+  };
+
+  preCheck = ''
+    cd ..
+  '';
+
+  checkInputs = [
+    pproxy
+    pytest-asyncio
+    pytest-randomly
+    pytestCheckHook
+    postgresql
+  ];
+
+  disabledTests = [
+    # linters shouldn't be run in checks
+    "test_version"
+  ];
+
+  disabledTestPaths = [
+    # TODO: requires the pooled variant
+    "tests/pool/"
+    # Network access
+    "tests/test_dns.py"
+    "tests/test_dns_srv.py"
+    # Mypy typing test
+    "tests/test_typing.py"
+  ];
+
+  pytestFlagsArray = [
+    "-o cache_dir=$TMPDIR"
+  ];
+
+  postCheck = ''
+    cd ${pname}
+  '';
+
+  meta = with lib; {
+    changelog = "https://github.com/psycopg/psycopg/blob/master/docs/news.rst";
+    description = "PostgreSQL database adapter for Python";
+    homepage = "https://github.com/psycopg/psycopg";
+    license = licenses.lgpl3Plus;
+    maintainers = with maintainers; [ hexa ];
+  };
+}
diff --git a/pkgs/development/python-modules/psycopg/libpq.patch b/pkgs/development/python-modules/psycopg/libpq.patch
new file mode 100644
index 0000000000000..51271c3021aab
--- /dev/null
+++ b/pkgs/development/python-modules/psycopg/libpq.patch
@@ -0,0 +1,22 @@
+diff --git a/psycopg/psycopg/pq/_pq_ctypes.py b/psycopg/psycopg/pq/_pq_ctypes.py
+index bf04d560..9e79fc3f 100644
+--- a/psycopg/psycopg/pq/_pq_ctypes.py
++++ b/psycopg/psycopg/pq/_pq_ctypes.py
+@@ -13,16 +13,7 @@ from typing import List, Optional, Tuple
+ 
+ from ..errors import NotSupportedError
+ 
+-if sys.platform == "win32":
+-    libname = ctypes.util.find_library("libpq.dll")
+-elif sys.platform == "darwin":
+-    libname = ctypes.util.find_library("libpq.dylib")
+-else:
+-    libname = ctypes.util.find_library("pq")
+-if not libname:
+-    raise ImportError("libpq library not found")
+-
+-pq = ctypes.cdll.LoadLibrary(libname)
++pq = ctypes.cdll.LoadLibrary("@libpq@")
+ 
+ # Get the libpq version to define what functions are available.
+ 
diff --git a/pkgs/development/python-modules/psygnal/default.nix b/pkgs/development/python-modules/psygnal/default.nix
index 4e05dd51b0573..00b3b9406617d 100644
--- a/pkgs/development/python-modules/psygnal/default.nix
+++ b/pkgs/development/python-modules/psygnal/default.nix
@@ -13,12 +13,12 @@
 }: buildPythonPackage rec
 {
   pname = "psygnal";
-  version = "0.3.3";
+  version = "0.3.5";
   src = fetchFromGitHub {
     owner = "tlambert03";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-BQmcA1gD2i4sxROH+a7gStcNK1mXYVerIZ2y6gn8vI8=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-8X6d0KZ61Uy5B68zuxtaimwnDSldWsVrL19iROS4X78=";
   };
   buildInputs = [ setuptools-scm ];
   propagatedBuildInputs = [ typing-extensions ];
diff --git a/pkgs/development/python-modules/py3status/default.nix b/pkgs/development/python-modules/py3status/default.nix
index 73bdc12586280..626de02595e33 100644
--- a/pkgs/development/python-modules/py3status/default.nix
+++ b/pkgs/development/python-modules/py3status/default.nix
@@ -24,11 +24,11 @@
 
 buildPythonPackage rec {
   pname = "py3status";
-  version = "3.43";
+  version = "3.45";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-H37Jcd7wZmDiCn7fk0SmlWYj46D3w/B9BdsEwqgEBjw=";
+    sha256 = "sha256-ksZM2PaeYhluq4nyw6MTFjSb/fQNJha7BRc8/U/7zwg=";
   };
 
   doCheck = false;
diff --git a/pkgs/development/python-modules/pyairvisual/default.nix b/pkgs/development/python-modules/pyairvisual/default.nix
index c4db96bca7599..3721bf1d8099c 100644
--- a/pkgs/development/python-modules/pyairvisual/default.nix
+++ b/pkgs/development/python-modules/pyairvisual/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "pyairvisual";
-  version = "2021.10.0";
+  version = "2022.07.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "bachya";
     repo = pname;
     rev = version;
-    sha256 = "sha256-Wj+ReRTYsP/XMrr74XPHrkHYT0sXfqcW/shbG3zNuH0=";
+    sha256 = "sha256-UzcKK0LJ/Xp5iVWsrDQ3nfhWgKAAxKmXrK1zPSoG/gY=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pyathena/default.nix b/pkgs/development/python-modules/pyathena/default.nix
index 78a75817bee01..772cedfe5eeb6 100644
--- a/pkgs/development/python-modules/pyathena/default.nix
+++ b/pkgs/development/python-modules/pyathena/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "pyathena";
-  version = "2.9.1";
+  version = "2.9.6";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "PyAthena";
     inherit version;
-    hash = "sha256-b1JdJhSe4ezKN4afZexwc/YT7OM9nIXHK7ca6nYRGnY=";
+    hash = "sha256-KFLmoX9OCUOxn5HuP6ZzrnGMQHO2dCJkDzcKpqCIy5s=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pyatmo/default.nix b/pkgs/development/python-modules/pyatmo/default.nix
index 9d75c2b01d85f..25d61641f2076 100644
--- a/pkgs/development/python-modules/pyatmo/default.nix
+++ b/pkgs/development/python-modules/pyatmo/default.nix
@@ -2,7 +2,6 @@
 , aiohttp
 , buildPythonPackage
 , fetchFromGitHub
-, freezegun
 , oauthlib
 , pytest-asyncio
 , pytest-mock
@@ -12,20 +11,21 @@
 , requests-oauthlib
 , requests-mock
 , setuptools-scm
+, time-machine
 }:
 
 buildPythonPackage rec {
   pname = "pyatmo";
-  version = "6.2.4";
-  format = "setuptools";
+  version = "7.0.1";
+  format = "pyproject";
 
   disabled = pythonOlder "3.8";
 
   src = fetchFromGitHub {
     owner = "jabesq";
     repo = "pyatmo";
-    rev = "v${version}";
-    sha256 = "sha256-VXkQByaNA02fwBO2yuf7w1ZF/oJwd/h21de1EQlCu2U=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-WrpRLAfViudC0n7AG5es2CM8XbZ0yJqXCY9yod9czb0=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
@@ -42,11 +42,11 @@ buildPythonPackage rec {
   ];
 
   checkInputs = [
-    freezegun
     pytest-asyncio
     pytest-mock
     pytestCheckHook
     requests-mock
+    time-machine
   ];
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pyatv/default.nix b/pkgs/development/python-modules/pyatv/default.nix
index 9454755f5cf1d..7439362e894c1 100644
--- a/pkgs/development/python-modules/pyatv/default.nix
+++ b/pkgs/development/python-modules/pyatv/default.nix
@@ -65,6 +65,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   disabledTestPaths = [
     # Test doesn't work in the sandbox
     "tests/protocols/companion/test_companion_auth.py"
diff --git a/pkgs/development/python-modules/pybids/default.nix b/pkgs/development/python-modules/pybids/default.nix
index 4640be0c436db..bddb9fb52200b 100644
--- a/pkgs/development/python-modules/pybids/default.nix
+++ b/pkgs/development/python-modules/pybids/default.nix
@@ -14,12 +14,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.15.0";
+  version = "0.15.1";
   pname = "pybids";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-Eq+4x7h1uR5QHXfgCEZl+7usc9CBFQClvV36Yyrqbd0=";
+    sha256 = "sha256-AlNQegTb/qQ+sfdaH3GqsEviEHa/6WwASIgAC4AuOPI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pycairo/default.nix b/pkgs/development/python-modules/pycairo/default.nix
index 85edbdb29b442..d58dd9b333c2b 100644
--- a/pkgs/development/python-modules/pycairo/default.nix
+++ b/pkgs/development/python-modules/pycairo/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "pycairo";
-  version = "1.20.1";
+  version = "1.21.0";
 
   disabled = pythonOlder "3.6";
 
@@ -21,8 +21,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "pygobject";
     repo = "pycairo";
-    rev = "v${version}";
-    sha256 = "09aisph7ycgb4xi2xglvrn59i3cyqms8jbb876cl9763g7yqbcr6";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-cwkGN5O15DduCLkFWeh8DPO4lY64iIlCQaUsCBKB8Mw=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pycognito/default.nix b/pkgs/development/python-modules/pycognito/default.nix
index ff050c15bfe08..f0399d751caeb 100644
--- a/pkgs/development/python-modules/pycognito/default.nix
+++ b/pkgs/development/python-modules/pycognito/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "pycognito";
-  version = "2022.02.1";
+  version = "2022.05.0";
   disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "pvizeli";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-0PqeZ8yy2MzvIi1xQNosR7V2Ma3tMT0Q/v4OIv7f1Kg=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-KPZcfTFZCPV/3tQHOGA99uAyYPkvusCwZrefKwEMAOo=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pycuda/default.nix b/pkgs/development/python-modules/pycuda/default.nix
index 1c443712db765..c0ea080396bd0 100644
--- a/pkgs/development/python-modules/pycuda/default.nix
+++ b/pkgs/development/python-modules/pycuda/default.nix
@@ -24,11 +24,11 @@ let
 in
 buildPythonPackage rec {
   pname = "pycuda";
-  version = "2021.1";
+  version = "2022.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "ab87312d0fc349d9c17294a087bb9615cffcf966ad7b115f5b051008a48dd6ed";
+    sha256 = "sha256-rNkDDZPnbmCxIuM60WvPAbsTRPTDBN7f8c0r/7DzE6M=";
   };
 
   preConfigure = with lib.versions; ''
diff --git a/pkgs/development/python-modules/pydantic/default.nix b/pkgs/development/python-modules/pydantic/default.nix
index 19396b8ee51a3..f9993850f1df9 100644
--- a/pkgs/development/python-modules/pydantic/default.nix
+++ b/pkgs/development/python-modules/pydantic/default.nix
@@ -27,7 +27,7 @@
 
 buildPythonPackage rec {
   pname = "pydantic";
-  version = "1.9.0";
+  version = "1.9.1";
 
   outputs = [
     "out"
@@ -40,8 +40,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "samuelcolvin";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-C4WP8tiMRFmkDkQRrvP3yOSM2zN8pHJmX9cdANIckpM=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-jqTtNJQ9lRkxDYGG4vg91qH1jrxRU9orEeUofO+bBpA=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pydata-sphinx-theme/default.nix b/pkgs/development/python-modules/pydata-sphinx-theme/default.nix
index a19eacc1c1942..4305b8aa67c10 100644
--- a/pkgs/development/python-modules/pydata-sphinx-theme/default.nix
+++ b/pkgs/development/python-modules/pydata-sphinx-theme/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "pydata-sphinx-theme";
-  version = "0.8.1";
+  version = "0.9.0";
 
   format = "wheel";
 
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     dist = "py3";
     python = "py3";
     pname = "pydata_sphinx_theme";
-    sha256 = "af2c99cb0b43d95247b1563860942ba75d7f1596360594fce510caaf8c4fcc16";
+    sha256 = "sha256-sitEKm1kN+Xq8KHwVxaf/LMeqp8Qvn1UgaEl5zXHHBI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pydbus/default.nix b/pkgs/development/python-modules/pydbus/default.nix
index aa3a41e2f8c58..f9a3e7f5ccb6c 100644
--- a/pkgs/development/python-modules/pydbus/default.nix
+++ b/pkgs/development/python-modules/pydbus/default.nix
@@ -11,6 +11,8 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ pygobject3 ];
 
+  pythonImportsCheck = [ "pydbus" ];
+
   meta = {
     homepage = "https://github.com/LEW21/pydbus";
     description = "Pythonic DBus library";
diff --git a/pkgs/development/python-modules/pydeconz/default.nix b/pkgs/development/python-modules/pydeconz/default.nix
index a61e45d2c48bc..4133346c39baa 100644
--- a/pkgs/development/python-modules/pydeconz/default.nix
+++ b/pkgs/development/python-modules/pydeconz/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "pydeconz";
-  version = "98";
+  version = "100";
   format = "setuptools";
 
   disabled = pythonOlder "3.9";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "Kane610";
     repo = "deconz";
     rev = "refs/tags/v${version}";
-    hash = "sha256-hCJRoyDWDxrBrxs2g6mVh7MOe6UMd+S8+ftfWyzWgH8=";
+    hash = "sha256-8wgvwYSGijxHB+CABHr+jnW87EnJE/67wrJqZgJk0mA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pydmd/default.nix b/pkgs/development/python-modules/pydmd/default.nix
index 68a19afddba71..28d9eeaecd678 100644
--- a/pkgs/development/python-modules/pydmd/default.nix
+++ b/pkgs/development/python-modules/pydmd/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "pydmd";
-  version = "0.4";
+  version = "0.4.0.post2207";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -20,8 +20,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "mathLab";
     repo = "PyDMD";
-    rev = "v${version}";
-    sha256 = "1qwa3dyrrm20x0pzr7rklcw7433fd822n4m8bbbdd7z83xh6xm8g";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-IiHNn8BXOl+eQdxwTrF8PQhDlsMOTj87ugpQ09kDTO4=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pydrive2/default.nix b/pkgs/development/python-modules/pydrive2/default.nix
index 2491bc5ff9a75..bb732993499ce 100644
--- a/pkgs/development/python-modules/pydrive2/default.nix
+++ b/pkgs/development/python-modules/pydrive2/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "pydrive2";
-  version = "1.10.0";
+  version = "1.10.1";
 
   src = fetchPypi {
     pname = "PyDrive2";
     inherit version;
-    sha256 = "sha256-970ZtP8e9sC5IvtqxVwNlHJKtTc4euSh3nl3hNd0Y6s=";
+    sha256 = "sha256-rCnW2h7/Pl8U09oK8Q/wvz0SRIQn7k6Z0vgzZmNFVIM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pyfakefs/default.nix b/pkgs/development/python-modules/pyfakefs/default.nix
index c3c6513f331c2..9f9dbe7fd7bf6 100644
--- a/pkgs/development/python-modules/pyfakefs/default.nix
+++ b/pkgs/development/python-modules/pyfakefs/default.nix
@@ -7,13 +7,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "4.5.6";
+  version = "4.6.2";
   pname = "pyfakefs";
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-kU17+ZRAbPvv7gtNRZGPYMFbQGr+k/gZSoBNpaRQqCI=";
+    sha256 = "sha256-jdnIAgvNCB8llleoadXq+cynuzZzx/A7+uiyi751mbY=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pygame-gui/default.nix b/pkgs/development/python-modules/pygame-gui/default.nix
index f56591efdadf3..7404a5fefcbb2 100644
--- a/pkgs/development/python-modules/pygame-gui/default.nix
+++ b/pkgs/development/python-modules/pygame-gui/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "pygame-gui";
-  version = "0.6.4";
+  version = "064";
   # nixpkgs-update: no auto update
 
   src = fetchFromGitHub {
     owner = "MyreMylar";
     repo = "pygame_gui";
-    rev = "v_${lib.replaceStrings ["."] [""] version}";
-    sha256 = "13+fK1hYxiMh0T+xbbmHViZjyBoQfRyIDc05fIJ/46U=";
+    rev = "refs/tags/v_${version}";
+    sha256 = "sha256-13+fK1hYxiMh0T+xbbmHViZjyBoQfRyIDc05fIJ/46U=";
   };
 
   propagatedBuildInputs = [ pygame python-i18n ];
diff --git a/pkgs/development/python-modules/pyinfra/default.nix b/pkgs/development/python-modules/pyinfra/default.nix
index 2c7019a26b7f3..632bb090f3f52 100644
--- a/pkgs/development/python-modules/pyinfra/default.nix
+++ b/pkgs/development/python-modules/pyinfra/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "pyinfra";
-  version = "2.2";
+  version = "2.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -26,8 +26,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "Fizzadar";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-G0ApoSBs8RRq/sKxyyCB7uCIFNccDMMCqPMIAHuJLCI=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-aKEbmvxsWOJU4DWkEWxezVqXwaUofMzEphB/Hj1XqHU=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pykdtree/default.nix b/pkgs/development/python-modules/pykdtree/default.nix
index 3161548f8b584..b4b442945962f 100644
--- a/pkgs/development/python-modules/pykdtree/default.nix
+++ b/pkgs/development/python-modules/pykdtree/default.nix
@@ -1,19 +1,24 @@
-{ lib, buildPythonPackage, fetchPypi, numpy, nose, openmp }:
+{ lib, buildPythonPackage, fetchPypi, numpy, pytestCheckHook, openmp }:
 
 buildPythonPackage rec {
   pname = "pykdtree";
-  version = "1.3.4";
+  version = "1.3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bebe5c608129f2997e88510c00010b9a78581b394924c0e3ecd131d52415165d";
+    sha256 = "sha256-c0L3XnMRA+ZT/B9rn9q8JBDPkrbnsGFggEp1eGybV0c=";
   };
 
   buildInputs = [ openmp ];
 
   propagatedBuildInputs = [ numpy ];
 
-  checkInputs = [ nose ];
+  preCheck = ''
+    # make sure we don't import pykdtree from the source tree
+    mv pykdtree tests
+  '';
+
+  checkInputs = [ pytestCheckHook ];
 
   meta = with lib; {
     description = "kd-tree implementation for fast nearest neighbour search in Python";
diff --git a/pkgs/development/python-modules/pylama/default.nix b/pkgs/development/python-modules/pylama/default.nix
index 0289b2462136c..be3854d1352ee 100644
--- a/pkgs/development/python-modules/pylama/default.nix
+++ b/pkgs/development/python-modules/pylama/default.nix
@@ -15,7 +15,7 @@
 , pytestCheckHook
 }:
 
-buildPythonPackage rec {
+let pylama = buildPythonPackage rec {
   pname = "pylama";
   version = "8.3.8";
 
@@ -46,13 +46,11 @@ buildPythonPackage rec {
     vulture
   ];
 
+  # escape infinite recursion pylint -> isort -> pylama
+  doCheck = false;
+
   checkInputs = [
-    # avoid infinite recursion pylint -> isort -> pylama
-    (pylint.override {
-      isort = isort.overridePythonAttrs (old: {
-        doCheck = false;
-      });
-    })
+    pylint
     pytestCheckHook
   ];
 
@@ -69,6 +67,10 @@ buildPythonPackage rec {
     "pylama.main"
   ];
 
+  passthru.tests = {
+    check = pylama.overridePythonAttrs (_: { doCheck = true; });
+  };
+
   meta = with lib; {
     description = "Code audit tool for python";
     homepage = "https://github.com/klen/pylama";
@@ -76,4 +78,4 @@ buildPythonPackage rec {
     license = licenses.mit;
     maintainers = with maintainers; [ dotlambda ];
   };
-}
+}; in pylama
diff --git a/pkgs/development/python-modules/pylint/default.nix b/pkgs/development/python-modules/pylint/default.nix
index 5fa39298cb5f0..3bc20493dd641 100644
--- a/pkgs/development/python-modules/pylint/default.nix
+++ b/pkgs/development/python-modules/pylint/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "pylint";
-  version = "2.14.1";
+  version = "2.14.5";
   format = "setuptools";
 
   disabled = pythonOlder "3.7.2";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "PyCQA";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-rtyqHRDywv3l8bDgEjQlsh8lvwWbLswOPujFakaLWOw=";
+    sha256 = "sha256-JTFGplqIA6WavwzKOkrm1rHBKNRrplBPvAdEkb/fTlI=";
   };
 
   nativeBuildInputs = [
@@ -85,6 +85,8 @@ buildPythonPackage rec {
     "test_generate_toml_config"
     "test_help_msg"
     "test_output_of_callback_options"
+    # Failed: DID NOT WARN. No warnings of type (<class 'UserWarning'>,) were emitted. The list of emitted warnings is: [].
+    "test_save_and_load_not_a_linter_stats"
   ] ++ lib.optionals stdenv.isDarwin [
     "test_parallel_execution"
     "test_py3k_jobs_option"
diff --git a/pkgs/development/python-modules/pylsp-mypy/default.nix b/pkgs/development/python-modules/pylsp-mypy/default.nix
index 5358b18402f2b..c9f263ad2b08f 100644
--- a/pkgs/development/python-modules/pylsp-mypy/default.nix
+++ b/pkgs/development/python-modules/pylsp-mypy/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "pylsp-mypy";
-  version = "0.5.8";
+  version = "0.6.2";
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "Richardk2n";
     repo = "pylsp-mypy";
     rev = "refs/tags/${version}";
-    sha256 = "sha256-Yu1e/8gYFYEZ/IoFo8WnyRNYkCZ9i7NgjEjYBbagWMA=";
+    sha256 = "sha256-uOfNSdQ1ONybEiYXW6xDHfUH+0HY9bxDlBCNl3xHEn8=";
   };
 
   disabledTests = [
diff --git a/pkgs/development/python-modules/pylutron-caseta/default.nix b/pkgs/development/python-modules/pylutron-caseta/default.nix
index 95a220adcfb20..1bbbcf308900b 100644
--- a/pkgs/development/python-modules/pylutron-caseta/default.nix
+++ b/pkgs/development/python-modules/pylutron-caseta/default.nix
@@ -34,6 +34,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   pythonImportsCheck = [
     "pylutron_caseta"
   ];
diff --git a/pkgs/development/python-modules/pymanopt/default.nix b/pkgs/development/python-modules/pymanopt/default.nix
index 8b1c4f2fd4cd7..a9107da6fb5ee 100644
--- a/pkgs/development/python-modules/pymanopt/default.nix
+++ b/pkgs/development/python-modules/pymanopt/default.nix
@@ -9,13 +9,13 @@
 
 buildPythonPackage rec {
   pname = "pymanopt";
-  version = "0.2.5";
+  version = "2.0.0";
 
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
-    rev = version;
-    sha256 = "0zk775v281375sangc5qkwrkb8yc9wx1g8b1917s4s8wszzkp8k6";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-dqyduExNgXIbEFlgkckaPfhLFSVLqPgwAOyBUdowwiQ=";
   };
 
   propagatedBuildInputs = [ numpy scipy ];
diff --git a/pkgs/development/python-modules/pymavlink/default.nix b/pkgs/development/python-modules/pymavlink/default.nix
index 361f8bff615d0..44abf56e7e474 100644
--- a/pkgs/development/python-modules/pymavlink/default.nix
+++ b/pkgs/development/python-modules/pymavlink/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pymavlink";
-  version = "2.4.29";
+  version = "2.4.31";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-0k6DKkb/Izk15JKrSOC0u5wL3vT4x2CelZt112vc/p0=";
+    sha256 = "sha256-p7cvwMpW1fS9Ml72vsD9L35wqPjtsQHW5lclw5SJ4P0=";
   };
 
   propagatedBuildInputs = [ future lxml ];
diff --git a/pkgs/development/python-modules/pymdown-extensions/default.nix b/pkgs/development/python-modules/pymdown-extensions/default.nix
index 068c3196952d4..08749312580c4 100644
--- a/pkgs/development/python-modules/pymdown-extensions/default.nix
+++ b/pkgs/development/python-modules/pymdown-extensions/default.nix
@@ -38,14 +38,14 @@ let
 in
 buildPythonPackage rec {
   pname = "pymdown-extensions";
-  version = "9.4";
+  version = "9.5";
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "facelessuser";
     repo = "pymdown-extensions";
-    rev = version;
-    sha256 = "sha256-9oYLDerz6ZcE4QyLO4mFPuHws8oZoXX8LcSV209MFec=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-bgvoY+8bbGoG1A93A+Uan1UDpQmEUu/TJu3FOkXechQ=";
   };
 
   nativeBuildInputs = [ hatchling ];
diff --git a/pkgs/development/python-modules/pymongo/default.nix b/pkgs/development/python-modules/pymongo/default.nix
index ba184f68b4b5a..9ebe37f4b8da3 100644
--- a/pkgs/development/python-modules/pymongo/default.nix
+++ b/pkgs/development/python-modules/pymongo/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "pymongo";
-  version = "3.12.3";
+  version = "4.1.1";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ConK3ABipeU2ZN3gQ/bAlxcrjBxfAJRJAJUoL/mZWl8=";
+    sha256 = "sha256-17jyXJsAQ8uvd7i4lYFOM+ejyAeglzd8B+G9SZRgMNU=";
   };
 
   # Tests call a running mongodb instance
diff --git a/pkgs/development/python-modules/pymupdf/default.nix b/pkgs/development/python-modules/pymupdf/default.nix
index 24c214fcba348..a516525e3bba2 100644
--- a/pkgs/development/python-modules/pymupdf/default.nix
+++ b/pkgs/development/python-modules/pymupdf/default.nix
@@ -13,12 +13,12 @@
 
 buildPythonPackage rec {
   pname = "pymupdf";
-  version = "1.19.6";
+  version = "1.20.1";
 
   src = fetchPypi {
     pname = "PyMuPDF";
     inherit version;
-    sha256 = "sha256-7z0T4n8Vhdd29qJZfxE6q9KNNrZIuYOnKFCyHFOZqwg=";
+    sha256 = "sha256-MFwaZLj7L9Rl4nzIvcvw9kIk8Oxtd2Pj9fLKZ4MTZkk=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pyopencl/default.nix b/pkgs/development/python-modules/pyopencl/default.nix
index 934d5fb811430..7016478cabd48 100644
--- a/pkgs/development/python-modules/pyopencl/default.nix
+++ b/pkgs/development/python-modules/pyopencl/default.nix
@@ -22,7 +22,7 @@ let
     if stdenv.isDarwin then [ mesa_drivers.dev ] else [ ocl-icd ];
 in buildPythonPackage rec {
   pname = "pyopencl";
-  version = "2022.1";
+  version = "2022.1.6";
 
   checkInputs = [ pytest ];
   buildInputs = [ opencl-headers pybind11 ] ++ os-specific-buildInputs;
@@ -40,7 +40,7 @@ in buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-JMbZoKH/dgnz1zZevYd4YWpUM8QmVmwsjjX/qwDvIsQ=";
+    sha256 = "sha256-+Ih9VOZUWY84VEclQLLrIorFa1aiSRuVvfrI8VvhyUM=";
   };
 
   # py.test is not needed during runtime, so remove it from `install_requires`
diff --git a/pkgs/development/python-modules/pyosmium/default.nix b/pkgs/development/python-modules/pyosmium/default.nix
index bd6b5d701dda2..3401e905a1a01 100644
--- a/pkgs/development/python-modules/pyosmium/default.nix
+++ b/pkgs/development/python-modules/pyosmium/default.nix
@@ -1,18 +1,19 @@
 { lib, buildPythonPackage, fetchFromGitHub, cmake, python
 , libosmium, protozero, boost, expat, bzip2, zlib, pybind11
-, nose, shapely, pythonOlder, isPyPy, lz4, requests }:
+, shapely, pythonOlder, isPyPy, lz4, requests, pytestCheckHook
+}:
 
 buildPythonPackage rec {
   pname = "pyosmium";
-  version = "3.2.0";
+  version = "3.3.0";
 
   disabled = pythonOlder "3.4" || isPyPy;
 
   src = fetchFromGitHub {
     owner = "osmcode";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0s9h1blz4vrgcvdiikbpi2d4cy69kg2s8ki4dzampm1s0pa92if5";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-vXxRXr+hRrA9oPf8wAS4qQT258Vz+KRSqYwwD6HrDxk=";
   };
 
   nativeBuildInputs = [ cmake ];
@@ -21,9 +22,10 @@ buildPythonPackage rec {
 
   preBuild = "cd ..";
 
-  checkInputs = [ nose shapely ];
-
-  checkPhase = "(cd test && ${python.interpreter} run_tests.py)";
+  checkInputs = [
+    pytestCheckHook
+    shapely
+  ];
 
   meta = with lib; {
     description = "Python bindings for libosmium";
diff --git a/pkgs/development/python-modules/pyotgw/default.nix b/pkgs/development/python-modules/pyotgw/default.nix
index b48c190ca1eda..2523e5e09a572 100644
--- a/pkgs/development/python-modules/pyotgw/default.nix
+++ b/pkgs/development/python-modules/pyotgw/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "pyotgw";
-  version = "unstable-2021-03-25";
+  version = "2.0.0";
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "mvn23";
     repo = pname;
-    rev = "1854ef4ffb907524ff457ba558e4979ba7fabd02";
-    sha256 = "0zckd85dmzpz0drcgx16ly6kzh1f1slcxb9lrcf81wh1p4q9bcaa";
+    rev = version;
+    hash = "sha256-82pGKcF7L7WBxInU7lkYTKQLkse5/HY8x0ZHZIyqCW4=";
   };
 
   propagatedBuildInputs = [
@@ -28,7 +28,9 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
-  pytestFlagsArray = [ "tests" ];
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
 
   pythonImportsCheck = [ "pyotgw" ];
 
diff --git a/pkgs/development/python-modules/pypandoc/default.nix b/pkgs/development/python-modules/pypandoc/default.nix
index 8e46be2697ce8..eb7287e4a1b02 100644
--- a/pkgs/development/python-modules/pypandoc/default.nix
+++ b/pkgs/development/python-modules/pypandoc/default.nix
@@ -1,14 +1,16 @@
-{ lib, substituteAll, buildPythonPackage, fetchPypi
+{ lib, substituteAll, buildPythonPackage, fetchFromGitHub
 , pandoc, texlive
 }:
 
 buildPythonPackage rec {
   pname = "pypandoc";
-  version = "1.7.5";
+  version = "1.8.1";
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "sha256-gCwmquF7ZBNsbQBpSdjOGDp9TZ+9Ty0FHmb0+59FylA=";
+  src = fetchFromGitHub {
+    owner = "NicklasTegner";
+    repo = pname;
+    rev = "v${version}";
+    hash = "sha256-1vQmONQFJrjptwVVjw25Wyt59loatjScsdnSax+q/f8=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/pypandoc/skip-tests.patch b/pkgs/development/python-modules/pypandoc/skip-tests.patch
index 201c5105c53bd..b7788f5d46e50 100644
--- a/pkgs/development/python-modules/pypandoc/skip-tests.patch
+++ b/pkgs/development/python-modules/pypandoc/skip-tests.patch
@@ -1,8 +1,8 @@
 diff --git a/tests.py b/tests.py
-index deb50e0..aede281 100755
+index 704f049..ef68728 100755
 --- a/tests.py
 +++ b/tests.py
-@@ -179,6 +179,7 @@ class TestPypandoc(unittest.TestCase):
+@@ -225,6 +225,7 @@ class TestPypandoc(unittest.TestCase):
              received = pypandoc.convert_file(file_url, 'rst')
              self.assertEqualExceptForNewlineEnd(expected, received)
  
diff --git a/pkgs/development/python-modules/pypandoc/static-pandoc-path.patch b/pkgs/development/python-modules/pypandoc/static-pandoc-path.patch
index 8f992185d6102..cff02b01b35de 100644
--- a/pkgs/development/python-modules/pypandoc/static-pandoc-path.patch
+++ b/pkgs/development/python-modules/pypandoc/static-pandoc-path.patch
@@ -1,11 +1,12 @@
 diff --git a/pypandoc/__init__.py b/pypandoc/__init__.py
-index 6d5b79b..65437aa 100644
+index b8f4e9a..295e182 100644
 --- a/pypandoc/__init__.py
 +++ b/pypandoc/__init__.py
-@@ -582,4 +582,4 @@ def clean_pandocpath_cache():
+@@ -771,5 +771,5 @@ def clean_pandocpath_cache():
+     __pandoc_path = None
  
  
 -__version = None
-+__version = "@pandocVersion@"
 -__pandoc_path = None
++__version = "@pandocVersion@"
 +__pandoc_path = "@pandoc@"
diff --git a/pkgs/development/python-modules/pypck/default.nix b/pkgs/development/python-modules/pypck/default.nix
index 6fe6e016d1cd5..c1996ae402a15 100644
--- a/pkgs/development/python-modules/pypck/default.nix
+++ b/pkgs/development/python-modules/pypck/default.nix
@@ -28,6 +28,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   disabledTests = lib.optionals stdenv.isDarwin [
     "test_connection_lost"
   ];
diff --git a/pkgs/development/python-modules/pypdf2/default.nix b/pkgs/development/python-modules/pypdf2/default.nix
index d147de042c9f7..8eb24dbe3385a 100644
--- a/pkgs/development/python-modules/pypdf2/default.nix
+++ b/pkgs/development/python-modules/pypdf2/default.nix
@@ -8,11 +8,11 @@
 
 buildPythonPackage rec {
   pname = "PyPDF2";
-  version = "1.28.4";
+  version = "2.5.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-BM5CzQVweIH+28oxZHRFEYBf6MMGGK5M+yuUDjNo1a0=";
+    sha256 = "sha256-WAKx9A+nm+G1q57claTn9+czmVidtPDmbKgx9Ennos0=";
   };
 
   LC_ALL = "en_US.UTF-8";
diff --git a/pkgs/development/python-modules/pyproj/default.nix b/pkgs/development/python-modules/pyproj/default.nix
index 815f0fb84c988..bcfb7a0ee1b80 100644
--- a/pkgs/development/python-modules/pyproj/default.nix
+++ b/pkgs/development/python-modules/pyproj/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "pyproj";
-  version = "3.3.0";
+  version = "3.3.1";
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "pyproj4";
     repo = "pyproj";
-    rev = version;
-    hash = "sha256-crLYNACS9I0WGOdkYCJNoyxeAYsR41ZszzKRZsYHCLY=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-QmpwnOnMjV29Tq+M6FCotDytq6zlhsp0Zgzw3V7nhNQ=";
   };
 
   # force pyproj to use ${proj}
diff --git a/pkgs/development/python-modules/pyprosegur/default.nix b/pkgs/development/python-modules/pyprosegur/default.nix
index d2d5102465697..e6d3be82c2c17 100644
--- a/pkgs/development/python-modules/pyprosegur/default.nix
+++ b/pkgs/development/python-modules/pyprosegur/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "pyprosegur";
-  version = "0.0.5";
+  version = "0.0.7";
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "dgomes";
     repo = pname;
-    rev = version;
-    sha256 = "0bpzxm8s548fw6j36brp7bcx9481x2hrypcw3yyg4ihsjhka5qln";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-eP8BFEdAJH2qHqqBXPxTaX1OGFggbWb3517G+gBPxhs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pyqt-builder/default.nix b/pkgs/development/python-modules/pyqt-builder/default.nix
index fd88e0fe4fe23..5e87e700a55f6 100644
--- a/pkgs/development/python-modules/pyqt-builder/default.nix
+++ b/pkgs/development/python-modules/pyqt-builder/default.nix
@@ -2,14 +2,20 @@
 
 buildPythonPackage rec {
   pname = "pyqt-builder";
-  version = "1.12.2";
+  version = "1.13.0";
 
   src = fetchPypi {
     pname = "PyQt-builder";
     inherit version;
-    sha256 = "f62bb688d70e0afd88c413a8d994bda824e6cebd12b612902d1945c5a67edcd7";
+    sha256 = "sha256-SHdYDDjOtTIOEps4HQg7CoYBxoFm2LmXB/CPoKFonu8=";
   };
 
+  patches = [
+    # use the sip-distinfo executable from PATH instead of trying to guess,
+    # we know it's the right one because it's the _only_ one
+    ./use-sip-distinfo-from-path.patch
+  ];
+
   propagatedBuildInputs = [ packaging sip ];
 
   pythonImportsCheck = [ "pyqtbuild" ];
diff --git a/pkgs/development/python-modules/pyqt-builder/use-sip-distinfo-from-path.patch b/pkgs/development/python-modules/pyqt-builder/use-sip-distinfo-from-path.patch
new file mode 100644
index 0000000000000..43b2d7367e963
--- /dev/null
+++ b/pkgs/development/python-modules/pyqt-builder/use-sip-distinfo-from-path.patch
@@ -0,0 +1,20 @@
+diff --git a/pyqtbuild/builder.py b/pyqtbuild/builder.py
+index 3f35a7f..58701dd 100644
+--- a/pyqtbuild/builder.py
++++ b/pyqtbuild/builder.py
+@@ -51,15 +51,6 @@ class QmakeBuilder(Builder):
+         """ Set default values for user options that haven't been set yet. """
+ 
+         if tool in Option.BUILD_TOOLS:
+-            # A PEP 517 frontend will set PATH so that sip-distinfo is found on
+-            # it.  However for our own frontends we want to use the version
+-            # corresponding to the frontend (and, anyway, the frontend may not
+-            # be on PATH).
+-            if tool != 'pep517':
+-                self._sip_distinfo = os.path.join(
+-                        os.path.abspath(os.path.dirname(sys.argv[0])),
+-                        self._sip_distinfo)
+-
+             # Check we have a qmake.
+             if self.qmake is None:
+                 self.qmake = self._find_exe('qmake')
diff --git a/pkgs/development/python-modules/pyqt/5.x.nix b/pkgs/development/python-modules/pyqt/5.x.nix
index c604e61a2c378..5a4c825770db2 100644
--- a/pkgs/development/python-modules/pyqt/5.x.nix
+++ b/pkgs/development/python-modules/pyqt/5.x.nix
@@ -19,16 +19,32 @@
 
 buildPythonPackage rec {
   pname = "PyQt5";
-  version = "5.15.4";
+  version = "5.15.7";
   format = "pyproject";
 
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1gp5jz71nmg58zsm1h4vzhcphf36rbz37qgsfnzal76i1mz5js9a";
+    sha256 = "sha256-dVEhpSs6CMsHJ1wQ67lldtNuMg5XJZHbFs/bxVgQFZQ=";
   };
 
+  patches = [
+    # Fix some wrong assumptions by ./project.py
+    # TODO: figure out how to send this upstream
+    ./pyqt5-fix-dbus-mainloop-support.patch
+    # confirm license when installing via pyqt5_sip
+    ./pyqt5-confirm-license.patch
+  ];
+
+  # be more verbose
+  postPatch = ''
+    cat >> pyproject.toml <<EOF
+    [tool.sip.project]
+    verbose = true
+    EOF
+  '';
+
   outputs = [ "out" "dev" ];
 
   dontWrapQtApps = true;
@@ -68,12 +84,6 @@ buildPythonPackage rec {
     pyqt5_sip
   ];
 
-  patches = [
-    # Fix some wrong assumptions by ./project.py
-    # TODO: figure out how to send this upstream
-    ./pyqt5-fix-dbus-mainloop-support.patch
-  ];
-
   passthru = {
     inherit sip pyqt5_sip;
     multimediaEnabled = withMultimedia;
diff --git a/pkgs/development/python-modules/pyqt/pyqt5-confirm-license.patch b/pkgs/development/python-modules/pyqt/pyqt5-confirm-license.patch
new file mode 100644
index 0000000000000..9587e5ced28d5
--- /dev/null
+++ b/pkgs/development/python-modules/pyqt/pyqt5-confirm-license.patch
@@ -0,0 +1,13 @@
+diff --git a/projectepy b/project.py
+--- a/project.py
++++ b/project.py
+@@ -163,8 +163,7 @@
+ 
+         # Automatically confirm the license if there might not be a command
+         # line option to do so.
+-        if tool == 'pep517':
+-            self.confirm_license = True
++        self.confirm_license = True
+ 
+         self._check_license()
+ 
diff --git a/pkgs/development/python-modules/pyqt/sip.nix b/pkgs/development/python-modules/pyqt/sip.nix
index aa29d9ad9d34e..6cb1433e33853 100644
--- a/pkgs/development/python-modules/pyqt/sip.nix
+++ b/pkgs/development/python-modules/pyqt/sip.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "pyqt5-sip";
-  version = "12.9.1";
+  version = "12.11.0";
 
   src = fetchPypi {
     pname = "PyQt5_sip";
     inherit version;
-    sha256 = "LyTymbRMURwjeWqvu7WBv96/eNCQVle3zuIUG0mCAw4=";
+    sha256 = "sha256-tHEP2FtX7e9xbMVfrkW/1b+sb8e6kQNvHcw/Mxyg6zk=";
   };
 
   # There is no test code and the check phase fails with:
diff --git a/pkgs/development/python-modules/pyquil/default.nix b/pkgs/development/python-modules/pyquil/default.nix
index c1aa5d56040b3..3b308c4d59e6f 100644
--- a/pkgs/development/python-modules/pyquil/default.nix
+++ b/pkgs/development/python-modules/pyquil/default.nix
@@ -62,7 +62,8 @@ buildPythonPackage rec {
 
   postPatch = ''
     substituteInPlace pyproject.toml \
-      --replace 'lark = "^0.11.1"' 'lark = "*"'
+      --replace 'lark = "^0.11.1"' 'lark = "*"' \
+      --replace 'qcs-api-client = ">=0.8.1,<0.21.0"' 'qcs-api-client = "*"'
   '';
 
   disabledTestPaths = [
diff --git a/pkgs/development/python-modules/pyrfxtrx/default.nix b/pkgs/development/python-modules/pyrfxtrx/default.nix
index 663440965fd3b..3c69d56a6ae15 100644
--- a/pkgs/development/python-modules/pyrfxtrx/default.nix
+++ b/pkgs/development/python-modules/pyrfxtrx/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "pyrfxtrx";
-  version = "0.29.0";
+  version = "0.30.0";
 
   src = fetchFromGitHub {
     owner = "Danielhiversen";
     repo = "pyRFXtrx";
-    rev = version;
-    hash = "sha256-0tdT7UIT9F2z9+ufnzaACVxRybWxFjZObYQCd3hcXTk=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-ntnZITj8upzUzlrSTjQxY9xNTU+gJ2rE9PN35cpWwvM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pyroute2-core/default.nix b/pkgs/development/python-modules/pyroute2-core/default.nix
deleted file mode 100644
index 76fb240445563..0000000000000
--- a/pkgs/development/python-modules/pyroute2-core/default.nix
+++ /dev/null
@@ -1,37 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, pyroute2-core
-, pythonOlder
-}:
-
-buildPythonPackage rec {
-  pname = "pyroute2-core";
-  version = "0.6.13";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    pname = "pyroute2.core";
-    inherit version;
-    hash = "sha256-In39nxmIjd0TQZZoIv/ViA2548iTdQlkGMZg/00aEdA=";
-  };
-
-  # pyroute2 sub-modules have no tests
-  doCheck = false;
-
-  pythonImportsCheck = [
-    "pr2modules.common"
-    "pr2modules.config"
-    "pr2modules.proxy"
-  ];
-
-  meta = with lib; {
-    description = "Core module for pyroute2";
-    homepage = "https://github.com/svinota/pyroute2";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ fab ];
-    platforms = platforms.unix;
-  };
-}
diff --git a/pkgs/development/python-modules/pyroute2-ethtool/default.nix b/pkgs/development/python-modules/pyroute2-ethtool/default.nix
deleted file mode 100644
index f163336028d16..0000000000000
--- a/pkgs/development/python-modules/pyroute2-ethtool/default.nix
+++ /dev/null
@@ -1,39 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, pyroute2-core
-, pythonOlder
-}:
-
-buildPythonPackage rec {
-  pname = "pyroute2-ethtool";
-  version = "0.6.13";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    pname = "pyroute2.ethtool";
-    inherit version;
-    hash = "sha256-Cmh/6g/Nd9kHTHwYujXZufcOQhfr5opofiAECEc6O9Q=";
-  };
-
-  propagatedBuildInputs = [
-    pyroute2-core
-  ];
-
-  # pyroute2 sub-modules have no tests
-  doCheck = false;
-
-  pythonImportsCheck = [
-    "pr2modules.ethtool"
-  ];
-
-  meta = with lib; {
-    description = "Ethtool module for pyroute2";
-    homepage = "https://github.com/svinota/pyroute2";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ fab ];
-    platforms = platforms.unix;
-  };
-}
diff --git a/pkgs/development/python-modules/pyroute2-ipdb/default.nix b/pkgs/development/python-modules/pyroute2-ipdb/default.nix
deleted file mode 100644
index a991645d4ce2c..0000000000000
--- a/pkgs/development/python-modules/pyroute2-ipdb/default.nix
+++ /dev/null
@@ -1,39 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, pyroute2-core
-, pythonOlder
-}:
-
-buildPythonPackage rec {
-  pname = "pyroute2-ipdb";
-  version = "0.6.13";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    pname = "pyroute2.ipdb";
-    inherit version;
-    hash = "sha256-u7u3XRO+luRUnPcOuU/XCy4XNuowGsa2g/VqoazYTVo=";
-  };
-
-  propagatedBuildInputs = [
-    pyroute2-core
-  ];
-
-  # pyroute2 sub-modules have no tests
-  doCheck = false;
-
-  pythonImportsCheck = [
-    "pr2modules.ipdb"
-  ];
-
-  meta = with lib; {
-    description = "Ipdb module for pyroute2";
-    homepage = "https://github.com/svinota/pyroute2";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ fab ];
-    platforms = platforms.unix;
-  };
-}
diff --git a/pkgs/development/python-modules/pyroute2-ipset/default.nix b/pkgs/development/python-modules/pyroute2-ipset/default.nix
deleted file mode 100644
index 28c806143808f..0000000000000
--- a/pkgs/development/python-modules/pyroute2-ipset/default.nix
+++ /dev/null
@@ -1,39 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, pyroute2-core
-, pythonOlder
-}:
-
-buildPythonPackage rec {
-  pname = "pyroute2-ipset";
-  version = "0.6.13";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    pname = "pyroute2.ipset";
-    inherit version;
-    hash = "sha256-KKJU9iKhiXbQaDYD1a79pat8hSj6nja+uFvOUgJveGY=";
-  };
-
-  propagatedBuildInputs = [
-    pyroute2-core
-  ];
-
-  # pyroute2 sub-modules have no tests
-  doCheck = false;
-
-  pythonImportsCheck = [
-    "pr2modules.ipset"
-  ];
-
-  meta = with lib; {
-    description = "Ipset module for pyroute2";
-    homepage = "https://github.com/svinota/pyroute2";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ fab ];
-    platforms = platforms.unix;
-  };
-}
diff --git a/pkgs/development/python-modules/pyroute2-ndb/default.nix b/pkgs/development/python-modules/pyroute2-ndb/default.nix
deleted file mode 100644
index c43adc07647f0..0000000000000
--- a/pkgs/development/python-modules/pyroute2-ndb/default.nix
+++ /dev/null
@@ -1,39 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, pyroute2-core
-, pythonOlder
-}:
-
-buildPythonPackage rec {
-  pname = "pyroute2-ndb";
-  version = "0.6.13";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    pname = "pyroute2.ndb";
-    inherit version;
-    hash = "sha256-CbH1XyYEPOZMkz6CJP0IREpJjzgeXcSDvJ9CjLrwkBo=";
-  };
-
-  propagatedBuildInputs = [
-    pyroute2-core
-  ];
-
-  # pyroute2 sub-modules have no tests
-  doCheck = false;
-
-  pythonImportsCheck = [
-    "pr2modules.ndb"
-  ];
-
-  meta = with lib; {
-    description = "NDB module for pyroute2";
-    homepage = "https://github.com/svinota/pyroute2";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ fab ];
-    platforms = platforms.unix;
-  };
-}
diff --git a/pkgs/development/python-modules/pyroute2-nftables/default.nix b/pkgs/development/python-modules/pyroute2-nftables/default.nix
deleted file mode 100644
index f6ac1b1f22478..0000000000000
--- a/pkgs/development/python-modules/pyroute2-nftables/default.nix
+++ /dev/null
@@ -1,35 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, pyroute2-core
-}:
-
-buildPythonPackage rec {
-  pname = "pyroute2-nftables";
-  version = "0.6.13";
-
-  src = fetchPypi {
-    pname = "pyroute2.nftables";
-    inherit version;
-    sha256 = "sha256-yUvXQNULA6Go2WVPdp53r8d6deBfxYh90FUeOXD4ZZI=";
-  };
-
-  propagatedBuildInputs = [
-    pyroute2-core
-  ];
-
-  # pyroute2 sub-modules have no tests
-  doCheck = false;
-
-  pythonImportsCheck = [
-    "pr2modules.nftables"
-  ];
-
-  meta = with lib; {
-    description = "Nftables module for pyroute2";
-    homepage = "https://github.com/svinota/pyroute2";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ fab ];
-    platforms = platforms.unix;
-  };
-}
diff --git a/pkgs/development/python-modules/pyroute2-nslink/default.nix b/pkgs/development/python-modules/pyroute2-nslink/default.nix
deleted file mode 100644
index 59eba1b76a1ec..0000000000000
--- a/pkgs/development/python-modules/pyroute2-nslink/default.nix
+++ /dev/null
@@ -1,39 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, pyroute2-core
-, pythonOlder
-}:
-
-buildPythonPackage rec {
-  pname = "pyroute2-nslink";
-  version = "0.6.13";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    pname = "pyroute2.nslink";
-    inherit version;
-    hash = "sha256-hu1QbK3MsVTNJ667Pb9z67cjw5EQTn8PO8LEo5xiNmw=";
-  };
-
-  propagatedBuildInputs = [
-    pyroute2-core
-  ];
-
-  # pyroute2 sub-modules have no tests
-  doCheck = false;
-
-  pythonImportsCheck = [
-    "pr2modules.nslink"
-  ];
-
-  meta = with lib; {
-    description = "Nslink module for pyroute2";
-    homepage = "https://github.com/svinota/pyroute2";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ fab ];
-    platforms = platforms.unix;
-  };
-}
diff --git a/pkgs/development/python-modules/pyroute2-protocols/default.nix b/pkgs/development/python-modules/pyroute2-protocols/default.nix
deleted file mode 100644
index 24758a91ca24c..0000000000000
--- a/pkgs/development/python-modules/pyroute2-protocols/default.nix
+++ /dev/null
@@ -1,39 +0,0 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, pyroute2-core
-, pythonOlder
-}:
-
-buildPythonPackage rec {
-  pname = "pyroute2-protocols";
-  version = "0.6.13";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    pname = "pyroute2.protocols";
-    inherit version;
-    hash = "sha256-bb7y0D7If2MAHabua9EzgEL2Ic+9BHVfYaMoxDCwAtY=";
-  };
-
-  propagatedBuildInputs = [
-    pyroute2-core
-  ];
-
-  # pyroute2 sub-modules have no tests
-  doCheck = false;
-
-  pythonImportsCheck = [
-    "pr2modules.protocols"
-  ];
-
-  meta = with lib; {
-    description = "Protocols module for pyroute2";
-    homepage = "https://github.com/svinota/pyroute2";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ fab ];
-    platforms = platforms.unix;
-  };
-}
diff --git a/pkgs/development/python-modules/pyroute2/default.nix b/pkgs/development/python-modules/pyroute2/default.nix
index 632fadd3c2667..dd7193d6c7e02 100644
--- a/pkgs/development/python-modules/pyroute2/default.nix
+++ b/pkgs/development/python-modules/pyroute2/default.nix
@@ -3,37 +3,23 @@
 , fetchPypi
 , importlib-metadata
 , mitogen
-, pyroute2-core
-, pyroute2-ethtool
-, pyroute2-ipdb
-, pyroute2-ipset
-, pyroute2-ndb
-, pyroute2-nftables
-, pyroute2-nslink
 , pythonOlder
 }:
 
 buildPythonPackage rec {
   pname = "pyroute2";
-  version = "0.6.13";
-  format = "setuptools";
+  version = "0.7.1";
+  format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-sD1JpYGUX+wrHsfR1RJcb0C6BO0Rr/yQxMrdwBniV5I=";
+    hash = "sha256-pytarNr+lBb4rJqj7V1vJ8aWgojYJWhDLg9wOhdT3ZY=";
   };
 
   propagatedBuildInputs = [
     mitogen
-    pyroute2-core
-    pyroute2-ethtool
-    pyroute2-ipdb
-    pyroute2-ipset
-    pyroute2-ndb
-    pyroute2-nftables
-    pyroute2-nslink
   ] ++ lib.optionals (pythonOlder "3.8") [
     importlib-metadata
   ];
@@ -43,6 +29,16 @@ buildPythonPackage rec {
 
   pythonImportsCheck = [
     "pyroute2"
+    "pr2modules.common"
+    "pr2modules.config"
+    "pr2modules.ethtool"
+    "pr2modules.ipdb"
+    "pr2modules.ipset"
+    "pr2modules.ndb"
+    "pr2modules.nftables"
+    "pr2modules.nslink"
+    "pr2modules.protocols"
+    "pr2modules.proxy"
   ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/pysam/default.nix b/pkgs/development/python-modules/pysam/default.nix
index 2f65aa899e396..d8a38dff90849 100644
--- a/pkgs/development/python-modules/pysam/default.nix
+++ b/pkgs/development/python-modules/pysam/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname   = "pysam";
-  version = "0.18.0";
+  version = "0.19.1";
 
   # Fetching from GitHub instead of PyPi cause the 0.13 src release on PyPi is
   # missing some files which cause test failures.
@@ -23,8 +23,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "pysam-developers";
     repo = "pysam";
-    rev = "v${version}";
-    sha256 = "042ca27r6634xg2ixgvq1079cp714wmm6ml7bwc1snn0wxxzywfg";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-fbvfobffLha1eFatnHvh0tOYcuMRLTmy/BJ9QXFHx2o=";
   };
 
   nativeBuildInputs = [ samtools ];
diff --git a/pkgs/development/python-modules/pyshark/default.nix b/pkgs/development/python-modules/pyshark/default.nix
index 8585ffb232718..d92c58ec88bcc 100644
--- a/pkgs/development/python-modules/pyshark/default.nix
+++ b/pkgs/development/python-modules/pyshark/default.nix
@@ -1,6 +1,7 @@
 { lib
 , buildPythonPackage
 , fetchFromGitHub
+, appdirs
 , lxml
 , packaging
 , py
@@ -11,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "pyshark";
-  version = "0.4.6";
+  version = "0.5.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -22,17 +23,22 @@ buildPythonPackage rec {
     # 0.4.5 was the last release which was tagged
     # https://github.com/KimiNewt/pyshark/issues/541
     rev = "refs/tags/v${version}";
-    hash = "sha256-yEpUFihETKta3+Xb8eSyTZ1uSi7ao4OqWzsCgDLLhe8=";
+    hash = "sha256-byll2GWY2841AAf8Xh+KfaCOtMGVKabTsLCe3gCdZ1o=";
   };
 
   sourceRoot = "${src.name}/src";
 
   propagatedBuildInputs = [
+    appdirs
     py
     lxml
     packaging
   ];
 
+  preCheck = ''
+    export HOME=$TMPDIR
+  '';
+
   checkInputs = [
     pytestCheckHook
     wireshark-cli
diff --git a/pkgs/development/python-modules/pyshp/default.nix b/pkgs/development/python-modules/pyshp/default.nix
index 122d90ccf1ea7..ac0473eeef382 100644
--- a/pkgs/development/python-modules/pyshp/default.nix
+++ b/pkgs/development/python-modules/pyshp/default.nix
@@ -10,11 +10,12 @@ buildPythonPackage rec {
     sha256 = "sha256-glBk6kA6zxNehGz4sJJEmUMOa+HNN6DzS+cTCQZhfTw=";
   };
 
-  buildInputs = [ setuptools ];
+  pythonImportsCheck = [ "shapefile" ];
 
   meta = with lib; {
     description = "Pure Python read/write support for ESRI Shapefile format";
     homepage = "https://github.com/GeospatialPython/pyshp";
     license = licenses.mit;
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/development/python-modules/pysimplegui/default.nix b/pkgs/development/python-modules/pysimplegui/default.nix
index 31e40fcb12da3..7e2996cb7da57 100644
--- a/pkgs/development/python-modules/pysimplegui/default.nix
+++ b/pkgs/development/python-modules/pysimplegui/default.nix
@@ -7,7 +7,7 @@
 
 buildPythonPackage rec {
   pname = "pysimplegui";
-  version = "4.59.0";
+  version = "4.60.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -15,7 +15,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "PySimpleGUI";
     inherit version;
-    sha256 = "sha256-GW6BwKQ36sSJNZXy7mlRW5hB5gjTUb08V33XqRNFT1E=";
+    sha256 = "sha256-PqGOOq6lFb30Dn1zAV0QHZKr3fIUsTSudnTpnFi5ZZg=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pysoma/default.nix b/pkgs/development/python-modules/pysoma/default.nix
index 893736ff1603c..beba513057809 100644
--- a/pkgs/development/python-modules/pysoma/default.nix
+++ b/pkgs/development/python-modules/pysoma/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "pysoma";
-  version = "0.0.10";
+  version = "0.0.11";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1q8afi6m3mfh0rfpghyvx6z76kgrpkbnlqzbs4p8ax13n0fnlkdi";
+    sha256 = "sha256-U/kLaO/GBpOa9mHHlYQiWSw7sVNPaMneDURoJBqqojo=";
   };
 
   # Project has no test
diff --git a/pkgs/development/python-modules/pyspcwebgw/default.nix b/pkgs/development/python-modules/pyspcwebgw/default.nix
index bc11a30334daa..b847240869acd 100644
--- a/pkgs/development/python-modules/pyspcwebgw/default.nix
+++ b/pkgs/development/python-modules/pyspcwebgw/default.nix
@@ -34,6 +34,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   pythonImportsCheck = [ "pyspcwebgw" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/pyspnego/default.nix b/pkgs/development/python-modules/pyspnego/default.nix
index 563042091bf74..966fb66792373 100644
--- a/pkgs/development/python-modules/pyspnego/default.nix
+++ b/pkgs/development/python-modules/pyspnego/default.nix
@@ -13,15 +13,15 @@
 
 buildPythonPackage rec {
   pname = "pyspnego";
-  version = "0.5.0";
+  version = "0.5.3";
 
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "jborean93";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-CvPvyP7Vi2Ib+ikgUQt8JkVt5fxzapG590TgAehXqHE=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-awlS1VHXj6n9Ee4qUI1x5tEdkMF/ZEr9NPKh4ICkv3g=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pytautulli/default.nix b/pkgs/development/python-modules/pytautulli/default.nix
index b96a3de3f7ad8..aee51ae764f84 100644
--- a/pkgs/development/python-modules/pytautulli/default.nix
+++ b/pkgs/development/python-modules/pytautulli/default.nix
@@ -39,6 +39,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   pythonImportsCheck = [
     "pytautulli"
   ];
diff --git a/pkgs/development/python-modules/pyte/default.nix b/pkgs/development/python-modules/pyte/default.nix
index b907db22386cb..440a529cb4ff3 100644
--- a/pkgs/development/python-modules/pyte/default.nix
+++ b/pkgs/development/python-modules/pyte/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pyte";
-  version = "0.8.0";
+  version = "0.8.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7e71d03e972d6f262cbe8704ff70039855f05ee6f7ad9d7129df9c977b5a88c5";
+    sha256 = "sha256-ub/Rt4F1nnVypuVTwBDMk+71ihnY0VkERthMGbGwl7A=";
   };
 
   nativeBuildInputs = [ pytest-runner ];
diff --git a/pkgs/development/python-modules/pytest-asyncio/default.nix b/pkgs/development/python-modules/pytest-asyncio/default.nix
index 8c368c50e32c8..6eac9bf333be9 100644
--- a/pkgs/development/python-modules/pytest-asyncio/default.nix
+++ b/pkgs/development/python-modules/pytest-asyncio/default.nix
@@ -1,5 +1,6 @@
 { lib
 , buildPythonPackage
+, callPackage
 , fetchFromGitHub
 , flaky
 , hypothesis
@@ -11,18 +12,23 @@
 
 buildPythonPackage rec {
   pname = "pytest-asyncio";
-  version = "0.18.3";
-  format = "setuptools";
+  version = "0.19.0";
+  format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "pytest-dev";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-eopKlDKiTvGmqcqw44MKlhvSKswKZd/VDYRpZbuyOqM=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-A8ngASbSRwY4RjanalnWBGgskZMDO50ffOf6wMNqOvA=";
   };
 
+  outputs = [
+    "out"
+    "testout"
+  ];
+
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
 
   nativeBuildInputs = [
@@ -33,15 +39,13 @@ buildPythonPackage rec {
     pytest
   ];
 
-  checkInputs = [
-    flaky
-    hypothesis
-    pytestCheckHook
-  ];
+  postInstall = ''
+    mkdir $testout
+    cp -R tests $testout/tests
+  '';
 
-  disabledTestPaths = [
-    "tests/trio" # pytest-trio causes infinite recursion
-  ];
+  doCheck = false;
+  passthru.tests.pytest = callPackage ./tests.nix {};
 
   pythonImportsCheck = [
     "pytest_asyncio"
diff --git a/pkgs/development/python-modules/pytest-asyncio/tests.nix b/pkgs/development/python-modules/pytest-asyncio/tests.nix
new file mode 100644
index 0000000000000..17e60e4369bd2
--- /dev/null
+++ b/pkgs/development/python-modules/pytest-asyncio/tests.nix
@@ -0,0 +1,28 @@
+{ buildPythonPackage
+, flaky
+, hypothesis
+, pytest-asyncio
+, pytest-trio
+, pytestCheckHook
+}:
+
+buildPythonPackage rec {
+  pname = "pytest-asyncio-tests";
+  inherit (pytest-asyncio) version;
+
+  src = pytest-asyncio.testout;
+
+  dontBuild = true;
+  dontInstall = true;
+
+  propagatedBuildInputs = [
+    pytest-asyncio
+  ];
+
+  checkInputs = [
+    flaky
+    hypothesis
+    pytest-trio
+    pytestCheckHook
+  ];
+}
diff --git a/pkgs/development/python-modules/pytest-metadata/default.nix b/pkgs/development/python-modules/pytest-metadata/default.nix
index 057eb06ab3e06..321aacb5c704d 100644
--- a/pkgs/development/python-modules/pytest-metadata/default.nix
+++ b/pkgs/development/python-modules/pytest-metadata/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "pytest-metadata";
-  version = "2.0.1";
+  version = "2.0.2";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-XNtq7qi6kQkYHPnxScijrhQw/35EUGqPhmr4qYykYwE=";
+    sha256 = "sha256-/NL0FvFb4pWUNSezyLoWpErlpxQZOckMPcXOnRZ88qU=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/pytest-mock/default.nix b/pkgs/development/python-modules/pytest-mock/default.nix
index 8992694dca151..ed25a10d3a4e8 100644
--- a/pkgs/development/python-modules/pytest-mock/default.nix
+++ b/pkgs/development/python-modules/pytest-mock/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-mock";
-  version = "3.8.1";
+  version = "3.8.2";
 
   disabled = pythonOlder "3.7";
 
@@ -18,7 +18,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-LG11bV07+Y4ugHl6lZyn+B9Hnn0fX1cWEbD91tF0UkA=";
+    hash = "sha256-d/A/RVQ5JVhwApXgWu0LEJaiDUpgpPPdzeWLDDHI/KI=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/pytest-mpl/default.nix b/pkgs/development/python-modules/pytest-mpl/default.nix
index f0215ed7d7b2b..98f09edc68a12 100644
--- a/pkgs/development/python-modules/pytest-mpl/default.nix
+++ b/pkgs/development/python-modules/pytest-mpl/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "pytest-mpl";
-  version = "0.15.0";
+  version = "0.16.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-p5/UKLVoDYclp2o/MBb2oX1pHzxsQpHjmfwU1kFSKbw=";
+    sha256 = "sha256-TTqagfB15FEAxk+VWsEfaELT+B6Tw0wtXFi3wD2kD/0=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pytest-qt/default.nix b/pkgs/development/python-modules/pytest-qt/default.nix
index 23942b5223581..51e834fe96286 100644
--- a/pkgs/development/python-modules/pytest-qt/default.nix
+++ b/pkgs/development/python-modules/pytest-qt/default.nix
@@ -8,11 +8,11 @@
 
 buildPythonPackage rec {
   pname = "pytest-qt";
-  version = "4.0.2";
+  version = "4.1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "dfc5240dec7eb43b76bcb5f9a87eecae6ef83592af49f3af5f1d5d093acaa93e";
+    sha256 = "sha256-An89P13QSvBTDYRs9Q+4WPcZ9+h8LkocaGq9Tg9yFyo=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pytest-sugar/default.nix b/pkgs/development/python-modules/pytest-sugar/default.nix
index 953e56ae0a444..9b59eb2e55b80 100644
--- a/pkgs/development/python-modules/pytest-sugar/default.nix
+++ b/pkgs/development/python-modules/pytest-sugar/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "pytest-sugar";
-  version = "0.9.4";
+  version = "0.9.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b1b2186b0a72aada6859bea2a5764145e3aaa2c1cfbb23c3a19b5f7b697563d3";
+    sha256 = "sha256-7qeLbxW2NSd9PZAoDNOG2P7qHKsPm+dZR6Ym6LArR30=";
   };
 
   buildInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/pytest-xprocess/default.nix b/pkgs/development/python-modules/pytest-xprocess/default.nix
index fcd72ce9b9761..1b45c06969d3b 100644
--- a/pkgs/development/python-modules/pytest-xprocess/default.nix
+++ b/pkgs/development/python-modules/pytest-xprocess/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "pytest-xprocess";
-  version = "0.18.1";
+  version = "0.19.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fd9f30ed1584b5833bc34494748adf0fb9de3ca7bacc4e88ad71989c21cba266";
+    sha256 = "sha256-GCDFSdZx7bLInCX/HjjHDs2g/v4oDxPEWiyMbWbXtQ4=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/pytest/default.nix b/pkgs/development/python-modules/pytest/default.nix
index 8c40c835feb02..1523326de0bf8 100644
--- a/pkgs/development/python-modules/pytest/default.nix
+++ b/pkgs/development/python-modules/pytest/default.nix
@@ -1,5 +1,6 @@
 { lib
 , buildPythonPackage
+, callPackage
 , pythonOlder
 , fetchPypi
 , isPyPy
@@ -15,22 +16,23 @@
 , pluggy
 , py
 , tomli
-
-# tests
-, hypothesis
-, pygments
 }:
 
 buildPythonPackage rec {
   pname = "pytest";
-  version = "7.1.1";
+  version = "7.1.2";
   format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-hBEyyu9rGtF6mv3kbcT2z6WaBflVWq5RUfc73yggymM=";
+    sha256 = "sha256-oGoEJUU4ZKJwvEXnH3gzMKdCje+0Iw+15qcx/eBuzUU=";
   };
 
+  outputs = [
+    "out"
+    "testout"
+  ];
+
   nativeBuildInputs = [
     setuptools-scm
   ];
@@ -44,30 +46,14 @@ buildPythonPackage rec {
     tomli
   ];
 
-  checkInputs = [
-    hypothesis
-    pygments
-  ];
-
-  doCheck = !isPyPy; # https://github.com/pytest-dev/pytest/issues/3460
-
-  # Ignored file https://github.com/pytest-dev/pytest/pull/5605#issuecomment-522243929
-  # test_missing_required_plugins will emit deprecation warning which is treated as error
-  checkPhase = ''
-    runHook preCheck
-    $out/bin/py.test -x testing/ \
-      --ignore=testing/test_junitxml.py \
-      --ignore=testing/test_argcomplete.py \
-      -k "not test_collect_pyargs_with_testpaths and not test_missing_required_plugins"
-
-    # tests leave behind unreproducible pytest binaries in the output directory, remove:
-    find $out/lib -name "*-pytest-${version}.pyc" -delete
-    # specifically testing/test_assertion.py and testing/test_assertrewrite.py leave behind those:
-    find $out/lib -name "*opt-2.pyc" -delete
-
-    runHook postCheck
+  postInstall = ''
+    mkdir $testout
+    cp -R testing $testout/testing
   '';
 
+  doCheck = false;
+  passthru.tests.pytest = callPackage ./tests.nix { };
+
   # Remove .pytest_cache when using py.test in a Nix build
   setupHook = writeText "pytest-hook" ''
     pytestcachePhase() {
@@ -83,7 +69,7 @@ buildPythonPackage rec {
     # - files are not needed after tests are finished
     pytestRemoveBytecodePhase () {
         # suffix is defined at:
-        #    https://github.com/pytest-dev/pytest/blob/7.1.1/src/_pytest/assertion/rewrite.py#L51-L53
+        #    https://github.com/pytest-dev/pytest/blob/7.1.2/src/_pytest/assertion/rewrite.py#L51-L53
         find $out -name "*-pytest-*.py[co]" -delete
     }
     preDistPhases+=" pytestRemoveBytecodePhase"
diff --git a/pkgs/development/python-modules/pytest/tests.nix b/pkgs/development/python-modules/pytest/tests.nix
new file mode 100644
index 0000000000000..76581b1f3d77f
--- /dev/null
+++ b/pkgs/development/python-modules/pytest/tests.nix
@@ -0,0 +1,40 @@
+{ buildPythonPackage
+, isPyPy
+, pytest
+, hypothesis
+, pygments
+}:
+
+buildPythonPackage rec {
+  pname = "pytest-tests";
+  inherit (pytest) version;
+
+  src = pytest.testout;
+
+  dontBuild = true;
+  dontInstall = true;
+
+  checkInputs = [
+    hypothesis
+    pygments
+  ];
+
+  doCheck = !isPyPy; # https://github.com/pytest-dev/pytest/issues/3460
+
+  # Ignored file https://github.com/pytest-dev/pytest/pull/5605#issuecomment-522243929
+  # test_missing_required_plugins will emit deprecation warning which is treated as error
+  checkPhase = ''
+    runHook preCheck
+    ${pytest.out}/bin/py.test -x testing/ \
+      --ignore=testing/test_junitxml.py \
+      --ignore=testing/test_argcomplete.py \
+      -k "not test_collect_pyargs_with_testpaths and not test_missing_required_plugins"
+
+    # tests leave behind unreproducible pytest binaries in the output directory, remove:
+    find $out/lib -name "*-pytest-${version}.pyc" -delete
+    # specifically testing/test_assertion.py and testing/test_assertrewrite.py leave behind those:
+    find $out/lib -name "*opt-2.pyc" -delete
+
+    runHook postCheck
+  '';
+}
diff --git a/pkgs/development/python-modules/python-codon-tables/default.nix b/pkgs/development/python-modules/python-codon-tables/default.nix
index 7c4551a9d67a0..715a982d9fe21 100644
--- a/pkgs/development/python-modules/python-codon-tables/default.nix
+++ b/pkgs/development/python-modules/python-codon-tables/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "python-codon-tables";
-  version = "0.1.11";
+  version = "0.1.12";
 
   src = fetchPypi {
     pname = "python_codon_tables";
     inherit version;
-    sha256 = "ba590fcfb1988f9674c8627464caeb3ea0797d970872a2c27ea09906acd24110";
+    sha256 = "sha256-pzPoR55nU8ObPv1iIE52qpqD5xGdYLm1uG3nCD6I46Y=";
   };
 
   # no tests in tarball
diff --git a/pkgs/development/python-modules/python-dbusmock/default.nix b/pkgs/development/python-modules/python-dbusmock/default.nix
index 378c58f02364f..1be846aa2ae88 100644
--- a/pkgs/development/python-modules/python-dbusmock/default.nix
+++ b/pkgs/development/python-modules/python-dbusmock/default.nix
@@ -1,29 +1,51 @@
-{ lib, buildPythonPackage, fetchFromGitHub, runtimeShell,
-  nose, dbus, dbus-python, pygobject3,
-  which, pyflakes, pycodestyle, bluez, networkmanager
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, nose
+, dbus
+, dbus-python
+, pygobject3
+, bluez
+, networkmanager
+, setuptools-scm
 }:
 
 buildPythonPackage rec {
   pname = "python-dbusmock";
-  version = "0.26.1";
+  version = "0.28.3";
 
   src = fetchFromGitHub {
     owner = "martinpitt";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-kavbWMTgKU/rBIo7RMs9NkwReYQyEdeFwMBSzEM9wa0=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-LV94F2f0Ir2Ayzk2YLL76TqeUuC0f7e+bH3vC/xKgfU=";
   };
 
-  prePatch = ''
-    substituteInPlace tests/test_code.py \
-      --replace "pyflakes3" "pyflakes" \
-      --replace "/bin/bash" "${runtimeShell}" \
-      --replace "--ignore=E124,E402,E731,W504" "--ignore=E124,E402,E731,W504,E501" # ignore long lines too
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace '"dbus-python"' ""
   '';
 
+  SETUPTOOLS_SCM_PRETEND_VERSION = version;
+
+  nativeBuildInputs = [
+    setuptools-scm
+  ];
+
+  propagatedBuildInputs = [
+    dbus-python
+  ];
+
+  checkInputs = [
+    dbus
+    pygobject3
+    bluez
+    (lib.getOutput "test" bluez)
+    networkmanager
+    nose
+  ];
+
   # TODO: Get the rest of these tests running?
-  # This is a mocking library used as a check dependency for a single derivation.
-  # That derivation's tests pass. Maybe not worth the effort to fix these...
   NOSE_EXCLUDE = lib.concatStringsSep "," [
     "test_bluez4" # NixOS ships BlueZ5
     # These appear to fail because they're expecting to run in an Ubuntu chroot?
@@ -46,14 +68,9 @@ buildPythonPackage rec {
     # "test_networkmanager"
   ];
 
-  checkInputs = [
-    nose dbus dbus-python which pycodestyle pyflakes
-    pygobject3 bluez (lib.getOutput "test" bluez) networkmanager
-  ];
 
   checkPhase = ''
     runHook preCheck
-    export PATH="$PATH:${lib.getOutput "test" bluez}/test";
     nosetests -v
     runHook postCheck
   '';
diff --git a/pkgs/development/python-modules/python-gnupg/default.nix b/pkgs/development/python-modules/python-gnupg/default.nix
index e26e60c43ec46..3ece771e7b5f3 100644
--- a/pkgs/development/python-modules/python-gnupg/default.nix
+++ b/pkgs/development/python-modules/python-gnupg/default.nix
@@ -1,28 +1,29 @@
 { lib, buildPythonPackage, fetchPypi, gnupg }:
 
 buildPythonPackage rec {
-  pname   = "python-gnupg";
-  version = "0.4.8";
+  pname = "python-gnupg";
+  version = "0.4.9";
+
+  format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b64de1ae5cedf872b437201a566fa2c62ce0c95ea2e30177eb53aee1258507d7";
+    sha256 = "sha256-qqdIeVVyWRqvEntKyJhWhPNnP/grOfNwyDawBuaPxTc=";
   };
 
-  # Let's make the library default to our gpg binary
-  patchPhase = ''
+  postPatch = ''
     substituteInPlace gnupg.py \
-    --replace "gpgbinary='gpg'" "gpgbinary='${gnupg}/bin/gpg'"
+      --replace "gpgbinary='gpg'" "gpgbinary='${gnupg}/bin/gpg'"
     substituteInPlace test_gnupg.py \
-    --replace "gpgbinary=GPGBINARY" "gpgbinary='${gnupg}/bin/gpg'" \
-    --replace "test_search_keys" "disabled__test_search_keys"
+      --replace "os.environ.get('GPGBINARY', 'gpg')" "os.environ.get('GPGBINARY', '${gnupg}/bin/gpg')"
   '';
 
+  pythonImportsCheck = [ "gnupg" ];
+
   meta = with lib; {
-    description = "A wrapper for the Gnu Privacy Guard";
-    homepage    = "https://pypi.python.org/pypi/python-gnupg";
-    license     = licenses.bsd3;
+    description = "API for the GNU Privacy Guard (GnuPG)";
+    homepage = "https://github.com/vsajip/python-gnupg";
+    license = licenses.bsd3;
     maintainers = with maintainers; [ copumpkin ];
-    platforms   = platforms.unix;
   };
 }
diff --git a/pkgs/development/python-modules/python-gvm/default.nix b/pkgs/development/python-modules/python-gvm/default.nix
index b98c445818875..09678f34b244a 100644
--- a/pkgs/development/python-modules/python-gvm/default.nix
+++ b/pkgs/development/python-modules/python-gvm/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "python-gvm";
-  version = "21.11.0";
+  version = "22.6.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -20,8 +20,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "greenbone";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-H3cM+4YA6obYbo7qm7BhLlQxW4DKV6A3X0ZKsXWPDBs=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-MMVrq0Tbgl1rxPwsXs3BW9Gy+LFv8blxzmefje1qwSo=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/python-heatclient/default.nix b/pkgs/development/python-modules/python-heatclient/default.nix
index dc1694b83e8e8..a8b2d36097e31 100644
--- a/pkgs/development/python-modules/python-heatclient/default.nix
+++ b/pkgs/development/python-modules/python-heatclient/default.nix
@@ -22,11 +22,11 @@
 
 buildPythonApplication rec {
   pname = "python-heatclient";
-  version = "2.5.1";
+  version = "3.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-3l7XyxKm18BAM1DhNsCmRwcZR224+8m/jQ1YHrwLHCs=";
+    sha256 = "sha256-5OLysKbM2GbjMT8lshWDLMtqOrHq2DhhWvbw1oNBNZs=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/python-homewizard-energy/default.nix b/pkgs/development/python-modules/python-homewizard-energy/default.nix
index 9a13960090afc..7169c0560818b 100644
--- a/pkgs/development/python-modules/python-homewizard-energy/default.nix
+++ b/pkgs/development/python-modules/python-homewizard-energy/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "python-homewizard-energy";
-  version = "1.0.3";
+  version = "1.1.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.9";
@@ -20,8 +20,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "DCSBL";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-ioISqRFZZCojTJ/KYS8QUtoEpBNOPqY9lC9NFbZyh5A=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-D+WgAsH5CaAIw/lYMUd191f/9EGLvM93qB+b2/XULD8=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/python-json-logger/default.nix b/pkgs/development/python-modules/python-json-logger/default.nix
index 02768431197de..33b4140181823 100644
--- a/pkgs/development/python-modules/python-json-logger/default.nix
+++ b/pkgs/development/python-modules/python-json-logger/default.nix
@@ -6,13 +6,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "2.0.2";
+  version = "2.0.4";
   pname = "python-json-logger";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "202a4f29901a4b8002a6d1b958407eeb2dd1d83c18b18b816f5b64476dde9096";
+    sha256 = "sha256-dk12IXX5n8xGML1IU7CWMqy2CmIkrLJ84IzXDwsbgb0=";
   };
 
   checkInputs = [ nose ];
diff --git a/pkgs/development/python-modules/python-kasa/default.nix b/pkgs/development/python-modules/python-kasa/default.nix
index c45a32d2f61e4..d4c9524c9edd8 100644
--- a/pkgs/development/python-modules/python-kasa/default.nix
+++ b/pkgs/development/python-modules/python-kasa/default.nix
@@ -43,6 +43,10 @@ buildPythonPackage rec {
     voluptuous
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   disabledTestPaths = [
     # Skip the examples tests
     "kasa/tests/test_readme_examples.py"
diff --git a/pkgs/development/python-modules/python-lsp-server/default.nix b/pkgs/development/python-modules/python-lsp-server/default.nix
index aeb2d7567790d..41af2ad8e3ef3 100644
--- a/pkgs/development/python-modules/python-lsp-server/default.nix
+++ b/pkgs/development/python-modules/python-lsp-server/default.nix
@@ -37,7 +37,7 @@
 
 buildPythonPackage rec {
   pname = "python-lsp-server";
-  version = "1.4.1";
+  version = "1.5.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -45,8 +45,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "python-lsp";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-rEfjxHw2NIVIa8RepxLPiXkRFhcGWLzm6w43n60zkFE=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-tW2w94HI6iy8vcDb5pIL79bAO6BJp9q6SMAXgiVobm0=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/python-pam/default.nix b/pkgs/development/python-modules/python-pam/default.nix
index f152c1f264eb2..16883ee9426eb 100644
--- a/pkgs/development/python-modules/python-pam/default.nix
+++ b/pkgs/development/python-modules/python-pam/default.nix
@@ -2,29 +2,41 @@
 , buildPythonPackage
 , fetchFromGitHub
 , pam
+, six
+, toml
 }:
 
 buildPythonPackage rec {
   pname = "python-pam";
-  version = "1.8.4";
+  version = "2.0.2";
+  format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "FirefighterBlu3";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0gp7vzd332j7jwndcnz7kc9j283d6lyv32bndd1nqv9ghzv69sxp";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-MR9LYXtkbltAmn7yoyyKZn4yMHyh3rj/i/pA8nJy2xU=";
   };
 
+  postPatch = ''
+    substituteInPlace src/pam/__internals.py \
+      --replace 'find_library("pam")' '"${pam}/lib/libpam.so"' \
+      --replace 'find_library("pam_misc")' '"${pam}/lib/libpam_misc.so"'
+  '';
+
   buildInputs = [
     pam
   ];
 
-  postPatch = ''
-    sed "s|find_library(\"pam\")|\"${pam}/lib/libpam.so\"|g" -i pam.py
-  '';
+  propagatedBuildInputs = [
+    six
+    toml
+  ];
+
+  pythonImportsCheck = [ "pam" ];
 
   meta = with lib; {
-    description = "Python pam module supporting py3 (and py2)";
+    description = "Python pam module";
     homepage = "https://github.com/FirefighterBlu3/python-pam";
     license = licenses.mit;
     maintainers = with maintainers; [ abbradar mkg20001 ];
diff --git a/pkgs/development/python-modules/python-smarttub/default.nix b/pkgs/development/python-modules/python-smarttub/default.nix
index 1b1deba78fac6..ee7774654524c 100644
--- a/pkgs/development/python-modules/python-smarttub/default.nix
+++ b/pkgs/development/python-modules/python-smarttub/default.nix
@@ -38,6 +38,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   postPatch = ''
     substituteInPlace setup.py \
       --replace "pyjwt~=2.1.0" "pyjwt>=2.1.0"
diff --git a/pkgs/development/python-modules/pytomorrowio/default.nix b/pkgs/development/python-modules/pytomorrowio/default.nix
index abc90f2a6c7f4..8a6e374df0f67 100644
--- a/pkgs/development/python-modules/pytomorrowio/default.nix
+++ b/pkgs/development/python-modules/pytomorrowio/default.nix
@@ -10,13 +10,13 @@
 
 buildPythonPackage rec {
   pname = "pytomorrowio";
-  version = "0.3.3";
+  version = "0.3.4";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0d4f81dc90aefa26da18b927473cb7b08b093f7732301983ef5f0b1ca1181c62";
+    sha256 = "sha256-d4twa9bHaQ9XTHSb8pwJnnJ7tDH6vGpck3/8Y39tRaY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pytools/default.nix b/pkgs/development/python-modules/pytools/default.nix
index 2ee74e64b0650..3e811a39f00c8 100644
--- a/pkgs/development/python-modules/pytools/default.nix
+++ b/pkgs/development/python-modules/pytools/default.nix
@@ -5,23 +5,26 @@
 , decorator
 , numpy
 , platformdirs
+, typing-extensions
 , pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "pytools";
-  version = "2022.1.2";
+  version = "2022.1.12";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-XoJBAYgKJGNUdWNliAplu0FvaoyrZRO2j8u0j7oJD8s=";
+    sha256 = "sha256-TWKHXpoqsqJOOTqai3mUkvGnIb/6hArzgHv9Qocd0fQ=";
   };
 
   propagatedBuildInputs = [
     decorator
     numpy
     platformdirs
+  ] ++ lib.optionals (pythonOlder "3.11") [
+    typing-extensions
   ];
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/pytorch-lightning/default.nix b/pkgs/development/python-modules/pytorch-lightning/default.nix
index 5dbf04ef47046..b775f13fdacd8 100644
--- a/pkgs/development/python-modules/pytorch-lightning/default.nix
+++ b/pkgs/development/python-modules/pytorch-lightning/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "pytorch-lightning";
-  version = "1.6.4";
+  version = "1.6.5";
 
   disabled = isPy27;
 
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "PyTorchLightning";
     repo = pname;
     rev = "refs/tags/${version}";
-    hash = "sha256-X1xPyE53uo/eWPjQdXiObAnjgWc/Y/K+077Ypi5ZzcE=";
+    hash = "sha256-CgD5g5nhz2DI4gOQyPl8/Cq6wWHzL0ALgOB5SgUOgaI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pytorch-metric-learning/default.nix b/pkgs/development/python-modules/pytorch-metric-learning/default.nix
index 8dd2211e3e458..24be3f3eb4fbe 100644
--- a/pkgs/development/python-modules/pytorch-metric-learning/default.nix
+++ b/pkgs/development/python-modules/pytorch-metric-learning/default.nix
@@ -12,15 +12,15 @@
 
 buildPythonPackage rec {
   pname   = "pytorch-metric-learning";
-  version = "1.2.0";
+  version = "1.5.0";
 
   disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "KevinMusgrave";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-M/iH+pIuamOmvxLtKMzWXiuMCnMXzpVFRb/HfYfCKdc=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-ge6y5n1N/+nymgD4La3ger7N4vvcoo1Bxa+etirNFNI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pytradfri/default.nix b/pkgs/development/python-modules/pytradfri/default.nix
index 1f523b60eaa03..f5cbce6bcc0bd 100644
--- a/pkgs/development/python-modules/pytradfri/default.nix
+++ b/pkgs/development/python-modules/pytradfri/default.nix
@@ -4,12 +4,13 @@
 , fetchFromGitHub
 , aiocoap
 , dtlssocket
+, pydantic
 , pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "pytradfri";
-  version = "9.0.0";
+  version = "11.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
@@ -17,10 +18,14 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "home-assistant-libs";
     repo = "pytradfri";
-    rev = version;
-    hash = "sha256-12ol+2CnoPfkxmDGJJAkoafHGpQuWC4lh0N7lSvx2DE=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-+OOmoh2HLKiHAqOIH2aB4CZcW/ND/0bszgkcdRMYBlc=";
   };
 
+  propagatedBuildInputs = [
+    pydantic
+  ];
+
   passthru.optional-dependencies = {
     async = [
       aiocoap
diff --git a/pkgs/development/python-modules/pyturbojpeg/default.nix b/pkgs/development/python-modules/pyturbojpeg/default.nix
index 64b3d11e95a55..6207b992c7d14 100644
--- a/pkgs/development/python-modules/pyturbojpeg/default.nix
+++ b/pkgs/development/python-modules/pyturbojpeg/default.nix
@@ -10,13 +10,13 @@
 
 buildPythonPackage rec {
   pname = "pyturbojpeg";
-  version = "1.6.6";
+  version = "1.6.7";
   format = "setuptools";
 
   src = fetchPypi {
     pname = "PyTurboJPEG";
     inherit version;
-    hash = "sha256-gN0VNISogw2rTr58DuHLQ8VyOg6VE3X9T/j6fw0EdXw=";
+    hash = "sha256-e++Dl7khHWLXo+G9Gd8RQiF458OtYn+X7JU6HF6WzYA=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/pyvisa-py/default.nix b/pkgs/development/python-modules/pyvisa-py/default.nix
index 0c87af03ecce5..4b7a179678a30 100644
--- a/pkgs/development/python-modules/pyvisa-py/default.nix
+++ b/pkgs/development/python-modules/pyvisa-py/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "pyvisa-py";
-  version = "0.5.1";
+  version = "0.5.3";
 
   src = fetchFromGitHub {
     owner = "pyvisa";
     repo = "pyvisa-py";
-    rev = version;
-    hash = "sha256-V1BS+BvHVI8h/rynLnOHvQdIR6RwQrNa2p2S6GQug98=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-37GptqqBSIFOpm6SpS61ZZ9C4iU5AiOduVq255mTRNo=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pyvisa/default.nix b/pkgs/development/python-modules/pyvisa/default.nix
index 389adfbbb48cb..3fb0bbd51cec9 100644
--- a/pkgs/development/python-modules/pyvisa/default.nix
+++ b/pkgs/development/python-modules/pyvisa/default.nix
@@ -9,13 +9,13 @@
 
 buildPythonPackage rec {
   pname = "pyvisa";
-  version = "1.11.3";
+  version = "1.12.0";
 
   src = fetchFromGitHub {
     owner = "pyvisa";
     repo = "pyvisa";
-    rev = version;
-    hash = "sha256-Qe7W1zPI1aedLDnhkLTDPTa/lsNnCGik5Hu+jLn+meA=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-2khTfj0RRna9YDPOs5kQHHhkeMwv3kTtGyDBYnu+Yhw=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pywizlight/default.nix b/pkgs/development/python-modules/pywizlight/default.nix
index 0fcbf396d36a8..ccb9beb601f37 100644
--- a/pkgs/development/python-modules/pywizlight/default.nix
+++ b/pkgs/development/python-modules/pywizlight/default.nix
@@ -32,6 +32,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   disabledTests = [
     # Tests requires network features (e. g., discovery testing)
     "test_Bulb_Discovery"
diff --git a/pkgs/development/python-modules/pyzmq/default.nix b/pkgs/development/python-modules/pyzmq/default.nix
index 62de8e72b4c47..ea61a50560dac 100644
--- a/pkgs/development/python-modules/pyzmq/default.nix
+++ b/pkgs/development/python-modules/pyzmq/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "pyzmq";
-  version = "23.0.0";
+  version = "23.2.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-pF9cBHfRLfBe8uKSK0m3wK6dD0/5trsNZmVY3w7zcSI=";
+    hash = "sha256-pR8SqHGarZ3PtV1FYCLxa5CryN3n08qTzjEgtA4/oWk=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/qcs-api-client/default.nix b/pkgs/development/python-modules/qcs-api-client/default.nix
index 62adb2afd654b..95cd00d8facd0 100644
--- a/pkgs/development/python-modules/qcs-api-client/default.nix
+++ b/pkgs/development/python-modules/qcs-api-client/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "qcs-api-client";
-  version = "0.20.17";
+  version = "0.21.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -28,8 +28,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "rigetti";
     repo = "qcs-api-client-python";
-    rev = "v${version}";
-    hash = "sha256-5YGMBoykMtXZgdHubQJKwRqntDPnR6/qsWJc1cYk8CA=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-F3Fc03JWS73LcDCufWl/gLkjGvzlwLdBFVsSxtn3LvE=";
   };
 
   nativeBuildInputs = [
@@ -59,7 +59,7 @@ buildPythonPackage rec {
     (fetchpatch {
       name = "switch-to-poetry-core.patch";
       url = "https://github.com/rigetti/qcs-api-client-python/commit/32f0b3c7070a65f4edf5b2552648d88435469e44.patch";
-      sha256 = "sha256-mOc+Q/5cmwPziojtxeEMWWHSDvqvzZlNRbPtOSeTinQ=";
+      hash = "sha256-mOc+Q/5cmwPziojtxeEMWWHSDvqvzZlNRbPtOSeTinQ=";
     })
   ];
 
diff --git a/pkgs/development/python-modules/qdarkstyle/default.nix b/pkgs/development/python-modules/qdarkstyle/default.nix
index 6e3b6064fcb7c..2d402b0764508 100644
--- a/pkgs/development/python-modules/qdarkstyle/default.nix
+++ b/pkgs/development/python-modules/qdarkstyle/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "qdarkstyle";
-  version = "3.0.3";
+  version = "3.1";
 
   src = fetchPypi {
     inherit version;
     pname = "QDarkStyle";
-    sha256 = "936d2d35b552f429803a985dbc17fc879a2f966faa9fbf8983896ccfa33e68f6";
+    sha256 = "sha256-YAWE1iU0Pg3dEo3gg5PTw1Y3eGpJgn8XTSmqfKqCecE=";
   };
 
   # No tests available
diff --git a/pkgs/development/python-modules/qdldl/default.nix b/pkgs/development/python-modules/qdldl/default.nix
index d8e043d546da6..f818f49fa65d2 100644
--- a/pkgs/development/python-modules/qdldl/default.nix
+++ b/pkgs/development/python-modules/qdldl/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "qdldl";
-  version = "0.1.5.post0";
+  version = "0.1.5.post2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c392c7427651d8b226423c7aba4a0f2338a1f38a4bbdabac6bc4afd8bc934f06";
+    sha256 = "sha256-fa960b//HacdoG6C1RR72xrIZlgWF9jwbMTu2kjioUk=";
   };
 
   dontUseCmakeConfigure = true;
diff --git a/pkgs/development/python-modules/qiskit-ibmq-provider/default.nix b/pkgs/development/python-modules/qiskit-ibmq-provider/default.nix
index ca2f9b22d835a..4cad6f0bc5aaa 100644
--- a/pkgs/development/python-modules/qiskit-ibmq-provider/default.nix
+++ b/pkgs/development/python-modules/qiskit-ibmq-provider/default.nix
@@ -40,7 +40,7 @@ let
 in
 buildPythonPackage rec {
   pname = "qiskit-ibmq-provider";
-  version = "0.19.1";
+  version = "0.19.2";
 
   disabled = pythonOlder "3.6";
 
@@ -48,7 +48,7 @@ buildPythonPackage rec {
     owner = "Qiskit";
     repo = pname;
     rev = "refs/tags/${version}";
-    sha256 = "sha256-VdGdaOxCwD2Qa0JCCDVZJtcjhmTssS/KgpcjoaPXYB8=";
+    sha256 = "sha256-jfOyQ0wjYsJOAlix/P9dzBPmkv901eETmBYQzIHZqfg=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/qiskit-ignis/default.nix b/pkgs/development/python-modules/qiskit-ignis/default.nix
index a8f45b73e4905..0b40fc8fc7e6f 100644
--- a/pkgs/development/python-modules/qiskit-ignis/default.nix
+++ b/pkgs/development/python-modules/qiskit-ignis/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "qiskit-ignis";
-  version = "0.7.0";
+  version = "0.7.1";
 
   disabled = pythonOlder "3.6";
 
@@ -31,8 +31,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "Qiskit";
     repo = "qiskit-ignis";
-    rev = version;
-    hash = "sha256-5dsRKsz/nruWKuox/WJBghp2CWSDuYvax+G5ZxjZG4s=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-WyLNtZhtuGzqCJdOBvtBjZZiGFQihpeSjJQtP7lI248=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/qiskit-nature/default.nix b/pkgs/development/python-modules/qiskit-nature/default.nix
index ab794c9e9643a..7c7510675f13e 100644
--- a/pkgs/development/python-modules/qiskit-nature/default.nix
+++ b/pkgs/development/python-modules/qiskit-nature/default.nix
@@ -21,15 +21,15 @@
 
 buildPythonPackage rec {
   pname = "qiskit-nature";
-  version = "0.3.2";
+  version = "0.4.3";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "Qiskit";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-BXUVRZ8X3OJiRexNXZsnvp+Yh8ARNYohYH49/IYFYM0=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-trThxcft6AOxalOglOKPwrJ23Bqt/FmMCAucKmNmB7c=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/qiskit-terra/default.nix b/pkgs/development/python-modules/qiskit-terra/default.nix
index 8a649b27bd2ec..71486b30bc8e3 100644
--- a/pkgs/development/python-modules/qiskit-terra/default.nix
+++ b/pkgs/development/python-modules/qiskit-terra/default.nix
@@ -56,7 +56,7 @@ in
 
 buildPythonPackage rec {
   pname = "qiskit-terra";
-  version = "0.20.1";
+  version = "0.21.0";
 
   disabled = pythonOlder "3.7";
 
@@ -64,7 +64,7 @@ buildPythonPackage rec {
     owner = "qiskit";
     repo = pname;
     rev = version;
-    sha256 = "sha256-spKLPUlUXBmnIo/rnBPUFf72Vxd53xFhh409KzytpkI=";
+    hash = "sha256-imktzBpgP+lq6FsVWIUK82+t76gKTgt53kPfKOnsseQ=";
   };
 
   nativeBuildInputs = [ setuptools-rust ] ++ (with rustPlatform; [ rust.rustc rust.cargo cargoSetupHook ]);
@@ -72,7 +72,7 @@ buildPythonPackage rec {
   cargoDeps = rustPlatform.fetchCargoTarball {
     inherit src;
     name = "${pname}-${version}";
-    sha256 = "sha256-KNx7c5Jc1AWIpldMQ1AcWYuMb4W+yLY/cgB87hzPuVY=";
+    hash = "sha256-SXC0UqWjWqLlZvKCRBylSX73r4Vale130KzS0zM8gjQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/qiskit/default.nix b/pkgs/development/python-modules/qiskit/default.nix
index b3c15b1b3855c..458fa6a146e32 100644
--- a/pkgs/development/python-modules/qiskit/default.nix
+++ b/pkgs/development/python-modules/qiskit/default.nix
@@ -28,15 +28,15 @@ in
 buildPythonPackage rec {
   pname = "qiskit";
   # NOTE: This version denotes a specific set of subpackages. See https://qiskit.org/documentation/release_notes.html#version-history
-  version = "0.36.1";
+  version = "0.37.0";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "Qiskit";
     repo = "qiskit";
-    rev = version;
-    sha256 = "sha256-cprFWWvYgfoJXvK0Xoi67BwOXQfz7XeHT/JbfErqblk=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-TsDDiSWSjk2iXaxFjGXQxPFEPCR242dR26H0cpA6ZxY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/qnapstats/default.nix b/pkgs/development/python-modules/qnapstats/default.nix
index 2eeb4e81d28eb..1803d2ffe72eb 100644
--- a/pkgs/development/python-modules/qnapstats/default.nix
+++ b/pkgs/development/python-modules/qnapstats/default.nix
@@ -9,15 +9,15 @@
 
 buildPythonPackage rec {
   pname = "qnapstats";
-  version = "0.4.0";
+  version = "0.5.0";
 
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "colinodell";
     repo = "python-qnapstats";
-    rev = version;
-    hash = "sha256-Tzi2QG1Xw12fLVfV49SPJKdz5VdJ4hQMuCHH8gxcOBE=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-dpxl6a61h8zB7eS/2lxG+2//bOTzV6s4T1W+DVj0fnI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/qtconsole/default.nix b/pkgs/development/python-modules/qtconsole/default.nix
index f9eecbe23a8e8..a1483518f92bf 100644
--- a/pkgs/development/python-modules/qtconsole/default.nix
+++ b/pkgs/development/python-modules/qtconsole/default.nix
@@ -15,11 +15,11 @@
 
 buildPythonPackage rec {
   pname = "qtconsole";
-  version = "5.3.0";
+  version = "5.3.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-jjUg/cdeRqvEzGz/7KFvomUnVBCbiug5+ijifR66ViU=";
+    sha256 = "sha256-tzcj+sQ5OLaE3LI3qIUQ3HchxDpybOqK3heaKSfAovM=";
   };
 
   checkInputs = [ nose ] ++ lib.optionals isPy27 [mock];
diff --git a/pkgs/development/python-modules/qtpy/default.nix b/pkgs/development/python-modules/qtpy/default.nix
index 6c574c47e7557..31c05ce48f4e6 100644
--- a/pkgs/development/python-modules/qtpy/default.nix
+++ b/pkgs/development/python-modules/qtpy/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "QtPy";
-  version = "2.0.1";
+  version = "2.1.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "13zbhnl2rm30xafwrzfwdb4mjp7gk4s9h2xagbf83pnjzczhgzdd";
+    sha256 = "sha256-yozUIXF1GGNEKZ7kwPfnrc82LHCFK6NbJVpTQHcCXAY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/raincloudy/default.nix b/pkgs/development/python-modules/raincloudy/default.nix
index 860f9461e4438..c0fb2accc53a0 100644
--- a/pkgs/development/python-modules/raincloudy/default.nix
+++ b/pkgs/development/python-modules/raincloudy/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "raincloudy";
-  version = "1.1.1";
+  version = "1.2.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -20,8 +20,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "vanstinator";
     repo = pname;
-    rev = version;
-    hash = "sha256-c6tux0DZY56a4BpuiMXtaqm8+JKNDiyMxrFUju3cp2Y=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-qCkBVirM09iA1sXiOB9FJns8bHjQq7rRk8XbRWrtBDI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/rapidfuzz/default.nix b/pkgs/development/python-modules/rapidfuzz/default.nix
index ef76e2d8fa1ec..1e0c97079a38b 100644
--- a/pkgs/development/python-modules/rapidfuzz/default.nix
+++ b/pkgs/development/python-modules/rapidfuzz/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "rapidfuzz";
-  version = "2.1.2";
+  version = "2.1.3";
 
   disabled = pythonOlder "3.6";
 
@@ -29,8 +29,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "maxbachmann";
     repo = "RapidFuzz";
-    rev = "v${version}";
-    hash = "sha256-7BP22Fon+7a3ZxTCS838uoLXABYdEexMEH2vZ0/KoRQ=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-vK/56+5R6SgDz9DT92PzvDn8cSxSyUiCsV2EOcsGWTA=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/rasterio/default.nix b/pkgs/development/python-modules/rasterio/default.nix
index d7edf7927a8e0..7876e66674917 100644
--- a/pkgs/development/python-modules/rasterio/default.nix
+++ b/pkgs/development/python-modules/rasterio/default.nix
@@ -30,7 +30,7 @@
 
 buildPythonPackage rec {
   pname = "rasterio";
-  version = "1.2.10"; # not x.y[ab]z, those are alpha/beta versions
+  version = "1.3.0"; # not x.y[ab]z, those are alpha/beta versions
   format = "pyproject";
   disabled = pythonOlder "3.6";
 
@@ -38,8 +38,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "rasterio";
     repo = "rasterio";
-    rev = version;
-    hash = "sha256-xVGwQfQvxsqYihUYXENJAz9Qp9xBkhsGc/RheRTJxgo=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-CBnG1zNMOL3rAmnErv7XZZ2Cu9W+DnRPcjtKdmYXHUA=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/readthedocs-sphinx-ext/default.nix b/pkgs/development/python-modules/readthedocs-sphinx-ext/default.nix
index b71a675f6d8ef..e0ba8cd57cf44 100644
--- a/pkgs/development/python-modules/readthedocs-sphinx-ext/default.nix
+++ b/pkgs/development/python-modules/readthedocs-sphinx-ext/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "readthedocs-sphinx-ext";
-  version = "2.1.5";
+  version = "2.1.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-G/QuIOW3qUOJGnmM5cy5H9W6wiMLDBmdhTgMkhAHa3g=";
+    sha256 = "sha256-pX43E9r3e/kdG6GeS5iIpHwKv+tj7PAuOsd/z9mb/mk=";
   };
 
   propagatedBuildInputs = [ requests ];
diff --git a/pkgs/development/python-modules/redis/default.nix b/pkgs/development/python-modules/redis/default.nix
index 2018006caa9b9..adaf4d86ef69e 100644
--- a/pkgs/development/python-modules/redis/default.nix
+++ b/pkgs/development/python-modules/redis/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "redis";
-  version = "4.2.1";
+  version = "4.3.4";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-/kVROIEinb7mEGILnggXsfSMR7pjWHAyD9RKcSIEu90=";
+    sha256 = "sha256-3fJwcd9K3zghxPLKWdZ1JcOoLl8mi+2XuBPLT6v4eIA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/renault-api/default.nix b/pkgs/development/python-modules/renault-api/default.nix
index a2cfdd98d8450..5b2165c7583be 100644
--- a/pkgs/development/python-modules/renault-api/default.nix
+++ b/pkgs/development/python-modules/renault-api/default.nix
@@ -47,6 +47,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   pythonImportsCheck = [
     "renault_api"
   ];
diff --git a/pkgs/development/python-modules/reolink/default.nix b/pkgs/development/python-modules/reolink/default.nix
index 0b5d78358199d..896eb093cf9be 100644
--- a/pkgs/development/python-modules/reolink/default.nix
+++ b/pkgs/development/python-modules/reolink/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "reolink";
-  version = "0.60";
+  version = "0.61";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
@@ -19,8 +19,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "fwestenberg";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-4yk05obra0icWHPXaJ+Wj+xxDRkVYg/VsrXTQUdHJIc=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-XUYTDHh0oTro6BT+h4LjRdMukOZTlWP+giFpjLciZNQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/reportlab/default.nix b/pkgs/development/python-modules/reportlab/default.nix
index 35289d3b5d4bf..58b80d89c8e62 100644
--- a/pkgs/development/python-modules/reportlab/default.nix
+++ b/pkgs/development/python-modules/reportlab/default.nix
@@ -12,11 +12,11 @@ let
   ft = freetype.overrideAttrs (oldArgs: { dontDisableStatic = true; });
 in buildPythonPackage rec {
   pname = "reportlab";
-  version = "3.6.9";
+  version = "3.6.11";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-XQzDaCRWrSExUPbb/+fUfqtzfYCeUXwxYQM3a+VI+4Q=";
+    sha256 = "sha256-BPxEIPBUiBXQYj4DHIah9/PzAD5pnZr3FIdC4tcrAko=";
   };
 
   checkInputs = [ glibcLocales ];
diff --git a/pkgs/development/python-modules/repoze_sphinx_autointerface/default.nix b/pkgs/development/python-modules/repoze_sphinx_autointerface/default.nix
index 5d5e27a2e115d..9efb54e353710 100644
--- a/pkgs/development/python-modules/repoze_sphinx_autointerface/default.nix
+++ b/pkgs/development/python-modules/repoze_sphinx_autointerface/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "repoze.sphinx.autointerface";
-  version = "0.8";
+  version = "1.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8ef0383276ab722efb1e4a6523726262058dfd82615ccf7e5004aee3fe8ecc23";
+    sha256 = "sha256-SGvxQjpGlrkVPkiM750ybElv/Bbd6xSwyYh7RsYOKKE=";
   };
 
   propagatedBuildInputs = [ zope_interface sphinx ];
diff --git a/pkgs/development/python-modules/requests-cache/default.nix b/pkgs/development/python-modules/requests-cache/default.nix
index 9e092ca8251a2..23d24c944565a 100644
--- a/pkgs/development/python-modules/requests-cache/default.nix
+++ b/pkgs/development/python-modules/requests-cache/default.nix
@@ -3,24 +3,30 @@
 , attrs
 , buildPythonPackage
 , bson
+, boto3
+, botocore
 , cattrs
+, exceptiongroup
 , fetchFromGitHub
 , itsdangerous
 , poetry-core
+, pymongo
 , pytestCheckHook
 , pythonOlder
 , pyyaml
+, redis
 , requests
 , requests-mock
 , rich
 , timeout-decorator
 , ujson
+, urllib3
 , url-normalize
 }:
 
 buildPythonPackage rec {
   pname = "requests-cache";
-  version = "0.9.4";
+  version = "0.9.5";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -29,7 +35,7 @@ buildPythonPackage rec {
     owner = "reclosedev";
     repo = "requests-cache";
     rev = "v${version}";
-    hash = "sha256-9OlWMom/0OMlbPd3evjIaX75Gjlu+F8vKBJwX4Z58qQ=";
+    hash = "sha256-oVEai7SceZUdsGYlOOMxO6DxMZMVsvqXvEu0cHzq7lY=";
   };
 
   nativeBuildInputs = [
@@ -39,21 +45,46 @@ buildPythonPackage rec {
   propagatedBuildInputs = [
     appdirs
     attrs
-    bson
     cattrs
-    itsdangerous
-    pyyaml
+    exceptiongroup
     requests
-    ujson
+    urllib3
     url-normalize
   ];
 
+  passthru.optional-dependencies = {
+    dynamodb = [
+      boto3
+      botocore
+    ];
+    mongodbo = [
+      pymongo
+    ];
+    redis = [
+      redis
+    ];
+    bson = [
+      bson
+    ];
+    json = [
+      ujson
+    ];
+    security = [
+      itsdangerous
+    ];
+    yaml = [
+      pyyaml
+    ];
+  };
+
   checkInputs = [
     pytestCheckHook
     requests-mock
     rich
     timeout-decorator
-  ];
+  ]
+  ++ passthru.optional-dependencies.json
+  ++ passthru.optional-dependencies.security;
 
   preCheck = ''
     export HOME=$(mktemp -d);
diff --git a/pkgs/development/python-modules/requests-toolbelt/default.nix b/pkgs/development/python-modules/requests-toolbelt/default.nix
index 0417154a4a310..af6788d173fc5 100644
--- a/pkgs/development/python-modules/requests-toolbelt/default.nix
+++ b/pkgs/development/python-modules/requests-toolbelt/default.nix
@@ -26,7 +26,6 @@ buildPythonPackage rec {
   checkInputs = [
     betamax
     mock
-    pyopenssl
     pytestCheckHook
   ];
 
@@ -37,6 +36,16 @@ buildPythonPackage rec {
       url = "https://github.com/requests/toolbelt/commit/7188b06330e5260be20bce8cbcf0d5ae44e34eaf.patch";
       sha256 = "sha256-pRkG77sNglG/KsRX6JaPgk4QxmmSBXypFRp/vNA3ot4=";
     })
+    # Make pyopenssl optional
+    (fetchpatch {
+      url = "https://github.com/requests/toolbelt/commit/c7c1f8626b73e5715e6ecc1de0833fabdfd67323.patch";
+      sha256 = "sha256-OhE3nyYyKKRHs9rCq8EJYebwaYyjWjbvbtL79MIMMRc=";
+    })
+    # Make pyopenssl optional
+    (fetchpatch {
+      url = "https://github.com/requests/toolbelt/commit/2453f32f1c995e7b19294750a4177bc32326826e.patch";
+      sha256 = "sha256-qmKHp+aVeazZt8X+sZeYfZCB56SE0OvFvWCXRZtkCew=";
+    })
   ];
 
   disabledTests = [
diff --git a/pkgs/development/python-modules/respx/default.nix b/pkgs/development/python-modules/respx/default.nix
index 241f0f9e9da44..c144ed9adb282 100644
--- a/pkgs/development/python-modules/respx/default.nix
+++ b/pkgs/development/python-modules/respx/default.nix
@@ -35,6 +35,10 @@ buildPythonPackage rec {
     trio
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   postPatch = ''
     sed -i "/--cov/d" setup.cfg
   '';
diff --git a/pkgs/development/python-modules/rich/default.nix b/pkgs/development/python-modules/rich/default.nix
index 805f3cf6e9a3b..168915a4caf1a 100644
--- a/pkgs/development/python-modules/rich/default.nix
+++ b/pkgs/development/python-modules/rich/default.nix
@@ -1,4 +1,5 @@
 { lib
+, stdenv
 , buildPythonPackage
 , fetchFromGitHub
 , pythonOlder
@@ -12,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "rich";
-  version = "12.4.4";
+  version = "12.5.1";
   format = "pyproject";
   disabled = pythonOlder "3.6";
 
@@ -20,7 +21,7 @@ buildPythonPackage rec {
     owner = "Textualize";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-DW6cKJ5bXZdHGzgbYzTS+ryjy71dU9Lcy+egMXL30F8=";
+    sha256 = "sha256-FjzvFx+A4DS2XeKBZ2DGRqudvH22AUSQJnIxKs2O0AU=";
   };
 
   nativeBuildInputs = [ poetry-core ];
@@ -38,12 +39,17 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  disabledTests = lib.optionals stdenv.isDarwin [
+    # darwin console duplicates 3 of 4 lines
+    "test_rich_console_ex"
+  ];
+
   pythonImportsCheck = [ "rich" ];
 
   meta = with lib; {
     description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal";
     homepage = "https://github.com/Textualize/rich";
     license = licenses.mit;
-    maintainers = with maintainers; [ ris ];
+    maintainers = with maintainers; [ ris jyooru ];
   };
 }
diff --git a/pkgs/development/python-modules/robotframework-requests/default.nix b/pkgs/development/python-modules/robotframework-requests/default.nix
index b43227c8f5394..a81c24db7a78a 100644
--- a/pkgs/development/python-modules/robotframework-requests/default.nix
+++ b/pkgs/development/python-modules/robotframework-requests/default.nix
@@ -8,12 +8,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.9.2";
+  version = "0.9.3";
   pname = "robotframework-requests";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b40f7869312b37975b6705057f73ee335dba8176bb784b607680c57d58c9ef62";
+    sha256 = "sha256-C754uOezq5vsSWilG/N5XiZxABp4Cyt+vyriFSmI2jU=";
   };
 
   buildInputs = [ unittest2 ];
diff --git a/pkgs/development/python-modules/robotsuite/default.nix b/pkgs/development/python-modules/robotsuite/default.nix
index 5c46686adae4f..6e7897413ec24 100644
--- a/pkgs/development/python-modules/robotsuite/default.nix
+++ b/pkgs/development/python-modules/robotsuite/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "robotsuite";
-  version = "2.2.1";
+  version = "2.3.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8764e01990ac6774e0c983579bcb9cb79f44373a61ad47fbae9a1dc7eedbdd61";
+    sha256 = "sha256-iugVKUPl6HTTO8K1EbSqAk1fl/fsEPoOcsOnnAgcEas=";
   };
 
   buildInputs = [ unittest2 ];
diff --git a/pkgs/development/python-modules/rpcq/default.nix b/pkgs/development/python-modules/rpcq/default.nix
index 82db76bc859ff..bdf6f0f319934 100644
--- a/pkgs/development/python-modules/rpcq/default.nix
+++ b/pkgs/development/python-modules/rpcq/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "rpcq";
-  version = "3.9.2";
+  version = "3.10.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -21,8 +21,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "rigetti";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "1vvf6y7459f8aamhkcxx36ajiai143s2vwg751x0dl0lx7hp3yn5";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-J7jtGXJIF3jp0a0IQZmSR4TWf9D02Luau+Bupmi/d68=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/rpy2/default.nix b/pkgs/development/python-modules/rpy2/default.nix
index 6e83db8a96c3c..f75f3aee622d9 100644
--- a/pkgs/development/python-modules/rpy2/default.nix
+++ b/pkgs/development/python-modules/rpy2/default.nix
@@ -24,13 +24,13 @@
 }:
 
 buildPythonPackage rec {
-    version = "3.4.5";
+    version = "3.5.2";
     pname = "rpy2";
 
     disabled = isPyPy;
     src = fetchPypi {
       inherit version pname;
-      sha256 = "5d31a5ea43f5a59f6dec30faca87edb01fc9b8affa0beae96a99be923bd7dab3";
+      sha256 = "sha256-Re4A/brQtIHDk2n7MVZR3fhUz0rVbSS33LPHThNb0Q4=";
     };
 
     patches = [
diff --git a/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch b/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch
index a9e10f02b0bb2..2617472096d4e 100644
--- a/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch
+++ b/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch
@@ -1,11 +1,11 @@
 diff --git a/rpy2/rinterface_lib/embedded.py b/rpy2/rinterface_lib/embedded.py
-index 1f4babbf..322363c5 100644
+index ccd3a315..51fb5da4 100644
 --- a/rpy2/rinterface_lib/embedded.py
 +++ b/rpy2/rinterface_lib/embedded.py
-@@ -118,6 +118,16 @@ def _initr(
-         if openrlib.R_HOME is None:
-             raise ValueError('openrlib.R_HOME cannot be None.')
-         os.environ['R_HOME'] = openrlib.R_HOME
+@@ -276,6 +276,16 @@ def _initr(
+                  os.environ.get('LD_LIBRARY_PATH', ''))
+                 )
+         )
 +
 +        # path to libraries
 +        existing = os.environ.get('R_LIBS_SITE')
diff --git a/pkgs/development/python-modules/rtslib/default.nix b/pkgs/development/python-modules/rtslib/default.nix
index e6289378c9679..ac0c0fb692ba1 100644
--- a/pkgs/development/python-modules/rtslib/default.nix
+++ b/pkgs/development/python-modules/rtslib/default.nix
@@ -2,13 +2,13 @@
 
 buildPythonPackage rec {
   pname = "rtslib";
-  version = "2.1.74";
+  version = "2.1.75";
 
   src = fetchFromGitHub {
     owner = "open-iscsi";
     repo = "${pname}-fb";
-    rev = "v${version}";
-    sha256 = "1in10z6ckmkfhykar435k1fmswbfajysv4g9nsav893ij8g694fy";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-qBlr4K+LeJIC6Hwy6dN9n/VjHIUYCy8pLlRtPvooWyE=";
   };
 
   propagatedBuildInputs = [ six pyudev pygobject3 ];
diff --git a/pkgs/development/python-modules/rx/default.nix b/pkgs/development/python-modules/rx/default.nix
index 5febbe9f9a9d5..fc9cc3f172d90 100644
--- a/pkgs/development/python-modules/rx/default.nix
+++ b/pkgs/development/python-modules/rx/default.nix
@@ -1,18 +1,32 @@
-{ lib, fetchFromGitHub, buildPythonPackage, pythonOlder, nose }:
+{ lib, fetchFromGitHub, buildPythonPackage
+, pythonOlder
+, poetry-core
+, nose
+, typing-extensions
+}:
 
 buildPythonPackage rec {
   pname = "rx";
-  version = "3.2.0";
+  version = "4.0.4";
   disabled = pythonOlder "3.6";
+  format = "pyproject";
 
   # There are no tests on the pypi source
   src = fetchFromGitHub {
     owner = "ReactiveX";
     repo = "rxpy";
-    rev = "v${version}";
-    sha256 = "159ln0c721rrdz0mqyl3zvv6qsry7ql7ddlpwpnxs9q15ik15mnj";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-W1qYNbYV6Roz1GJtP/vpoPD6KigWaaQOWe1R5DZHlUw=";
   };
 
+  nativeBuildInputs = [
+    poetry-core
+  ];
+
+  propagatedBuildInputs = [
+    typing-extensions
+  ];
+
   checkInputs = [ nose ];
 
   # Some tests are nondeterministic. (`grep sleep -r tests`)
diff --git a/pkgs/development/python-modules/s3transfer/default.nix b/pkgs/development/python-modules/s3transfer/default.nix
index 3b07fe5b6d400..acd739d854e95 100644
--- a/pkgs/development/python-modules/s3transfer/default.nix
+++ b/pkgs/development/python-modules/s3transfer/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "s3transfer";
-  version = "0.5.0";
+  version = "0.6.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "boto";
     repo = pname;
     rev = version;
-    hash = "sha256-0Dl7oKB2xxq/a8do3HgBUIGay88yOGBUdOGo+QCtnUE=";
+    hash = "sha256-LM1/joc6TeyLLeAHpuCTz2vgpQ3TMkHrKitfiUp5ZrY=";
   };
 
   propagatedBuildInputs = [ botocore ];
diff --git a/pkgs/development/python-modules/sabyenc3/default.nix b/pkgs/development/python-modules/sabyenc3/default.nix
index edc339987dad5..4ae2b044ab87d 100644
--- a/pkgs/development/python-modules/sabyenc3/default.nix
+++ b/pkgs/development/python-modules/sabyenc3/default.nix
@@ -6,14 +6,14 @@
 
 buildPythonPackage rec {
   pname = "sabyenc3";
-  version = "5.4.2";
+  version = "5.4.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-6wXwmL1RCZ72KSqJgMjO3grvuDLWyMsbuU+kJmEkCmM=";
+    hash = "sha256-ei/SnVg4Oy6cBBPxg14lMMQBgbNR4Fg0aa+8sVBTY0Y=";
   };
 
   # Tests are not included in pypi distribution
diff --git a/pkgs/development/python-modules/safeio/default.nix b/pkgs/development/python-modules/safeio/default.nix
new file mode 100644
index 0000000000000..313c32156c4c5
--- /dev/null
+++ b/pkgs/development/python-modules/safeio/default.nix
@@ -0,0 +1,24 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+}:
+
+buildPythonPackage rec {
+  pname = "safeio";
+  version = "1.2";
+
+  src = fetchPypi {
+    pname = "safeIO";
+    inherit version;
+    sha256 = "d480a6dab01a390ebc24c12d6b774ad00cef3db5348ad07d8bd11d272a808cd3";
+  };
+
+  pythonImportsCheck = [ "safeIO" ];
+
+  meta = with lib; {
+    description = "Safely make I/O operations to files in Python even from multiple threads";
+    homepage = "https://github.com/Animenosekai/safeIO";
+    license = licenses.mit;
+    maintainers = with maintainers; [ ];
+  };
+}
diff --git a/pkgs/development/python-modules/safety/default.nix b/pkgs/development/python-modules/safety/default.nix
index 10ee872576d7e..5394a2af99a73 100644
--- a/pkgs/development/python-modules/safety/default.nix
+++ b/pkgs/development/python-modules/safety/default.nix
@@ -21,7 +21,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-28Xf+i5H2nbMQ9/oy7v8qZ0pEY0MbFTfz6EcK9NJ3/Y=";
+    hash = "sha256-28Xf+i5H2nbMQ9/oy7v8qZ0pEY0MbFTfz6EcK9NJ3/Y=";
   };
 
   postPatch = ''
@@ -53,6 +53,9 @@ buildPythonPackage rec {
     "test_announcements_if_is_not_tty"
     "test_check_live"
     "test_check_live_cached"
+    "test_check_vulnerabilities"
+    "test_license"
+    "test_chained_review"
   ];
 
   preCheck = ''
diff --git a/pkgs/development/python-modules/sanic/default.nix b/pkgs/development/python-modules/sanic/default.nix
index 2ab9c0808b8e1..45dec87633575 100644
--- a/pkgs/development/python-modules/sanic/default.nix
+++ b/pkgs/development/python-modules/sanic/default.nix
@@ -107,6 +107,9 @@ buildPythonPackage rec {
     "test_keep_alive_client_timeout"
     "test_keep_alive_server_timeout"
     "test_zero_downtime"
+    # broke with ujson 5.4 upgrade
+    # https://github.com/sanic-org/sanic/pull/2504
+    "test_json_response_json"
   ];
 
   disabledTestPaths = [
diff --git a/pkgs/development/python-modules/schema-salad/default.nix b/pkgs/development/python-modules/schema-salad/default.nix
index 1980b18dab84b..e35c1bb691092 100644
--- a/pkgs/development/python-modules/schema-salad/default.nix
+++ b/pkgs/development/python-modules/schema-salad/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "schema-salad";
-  version = "8.2.20220204150214";
+  version = "8.3.20220626185350";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-PlPb/nE3eWueUTWSDpa7JxPe2ee+KFna5VTR3IsClwQ=";
+    hash = "sha256-g8h3dAdN+tbdLRO3ctmsW+ZLiyhU0zPd1XR+XvEBpwo=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/scikit-hep-testdata/default.nix b/pkgs/development/python-modules/scikit-hep-testdata/default.nix
index 803daeb2ab3a6..7b9707278d5c6 100644
--- a/pkgs/development/python-modules/scikit-hep-testdata/default.nix
+++ b/pkgs/development/python-modules/scikit-hep-testdata/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "scikit-hep-testdata";
-  version = "0.4.12";
+  version = "0.4.15";
   format = "pyproject";
 
   # fetch from github as we want the data files
@@ -18,8 +18,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "scikit-hep";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-ZnsOmsajW4dDv53I/Cuu97mPJywGiwFhNGpT1WRfxSw=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-cEEtuLmGg/bDRYTUQXQiplzES28+xh8iQge6xZUTWIA=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/scikit-learn/default.nix b/pkgs/development/python-modules/scikit-learn/default.nix
index 82a85d7094130..6a97bcd46846d 100644
--- a/pkgs/development/python-modules/scikit-learn/default.nix
+++ b/pkgs/development/python-modules/scikit-learn/default.nix
@@ -19,12 +19,12 @@
 
 buildPythonPackage rec {
   pname = "scikit-learn";
-  version = "1.0.2";
+  version = "1.1.1";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-tYcJWaVIS2FPJtMcpMF1JLGwMXUiGZ3JhcO0JW4DB2c=";
+    sha256 = "sha256-Pne3Ho5kT4bItb5/HChe9ZfeTDhJYTie4+nKNsRFslY=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/scikits-odes/default.nix b/pkgs/development/python-modules/scikits-odes/default.nix
index 78ed6446f42ac..21baa7bfa37e2 100644
--- a/pkgs/development/python-modules/scikits-odes/default.nix
+++ b/pkgs/development/python-modules/scikits-odes/default.nix
@@ -15,13 +15,13 @@
 
 buildPythonPackage rec {
   pname = "scikits.odes";
-  version = "2.6.3";
+  version = "2.6.4";
 
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9693da78d1bd0bd6af8db59aeaaed92a399c6af36960c6a0a665a2130eab59e7";
+    sha256 = "sha256-fS9E0kO+ZEcGjiWQPAQHa52zOz9RafNSBPNKypm0GhA=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/scipy/default.nix b/pkgs/development/python-modules/scipy/default.nix
index d92dcc60f89df..4b6342691d434 100644
--- a/pkgs/development/python-modules/scipy/default.nix
+++ b/pkgs/development/python-modules/scipy/default.nix
@@ -15,11 +15,11 @@
 
 buildPythonPackage rec {
   pname = "scipy";
-  version = "1.8.0";
+  version = "1.8.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-MdTy1rckvJqY5Se1hJuKflib8epjDDOqVj7akSyf8L0=";
+    sha256 = "sha256-nj+xsOiW8UqFqpoo1fdV2q7rVMiXt0bfelXMsCs0DzM=";
   };
 
   nativeBuildInputs = [ cython gfortran pythran ];
diff --git a/pkgs/development/python-modules/selenium/default.nix b/pkgs/development/python-modules/selenium/default.nix
index a1db98deeb755..101135794385f 100644
--- a/pkgs/development/python-modules/selenium/default.nix
+++ b/pkgs/development/python-modules/selenium/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "selenium";
-  version = "4.2.0";
+  version = "4.3.0";
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "SeleniumHQ";
     repo = "selenium";
-    rev = "selenium-${version}"; # check if there is a newer tag with -python suffix
-    sha256 = "sha256-KhBCMsWGRD7hJqumA1+K8AVhJ7hq26XkEa1QbgY0Q0w=";
+    rev = "refs/tags/selenium-${version}"; # check if there is a newer tag with -python suffix
+    sha256 = "sha256-tD2sJGVBwqB0uOM3zwdNn71+ILYEHPAvWHvoJN24w6E=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/semantic-version/default.nix b/pkgs/development/python-modules/semantic-version/default.nix
index d3ca445961936..131cf230ef783 100644
--- a/pkgs/development/python-modules/semantic-version/default.nix
+++ b/pkgs/development/python-modules/semantic-version/default.nix
@@ -7,7 +7,7 @@
 
 buildPythonPackage rec {
   pname = "semantic-version";
-  version = "2.9.0";
+  version = "2.10.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -15,7 +15,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "semantic_version";
     inherit version;
-    sha256 = "sha256-q/VIc1U+Xgem/U1fZTt4H1rkEpekk2ZrWdzyFABqErI=";
+    sha256 = "sha256-vau20zaZjLs3jUuds6S1ah4yNXAdwF6iaQ2amX7VBBw=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/serpent/default.nix b/pkgs/development/python-modules/serpent/default.nix
index 12abfba056dca..2ab2b081f2b1f 100644
--- a/pkgs/development/python-modules/serpent/default.nix
+++ b/pkgs/development/python-modules/serpent/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "serpent";
-  version = "1.40";
+  version = "1.41";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "10b34e7f8e3207ee6fb70dcdc9bce473851ee3daf0b47c58aec1b48032ac11ce";
+    sha256 = "sha256-BAcDX+PGZEOH1Iz/FGfVqp/v+BTQc3K3hnftDuPtcJU=";
   };
 
   propagatedBuildInputs = lib.optionals isPy27 [ enum34 ];
diff --git a/pkgs/development/python-modules/setproctitle/default.nix b/pkgs/development/python-modules/setproctitle/default.nix
index 80fb7ab77f5c9..c48b7b9e1b3c9 100644
--- a/pkgs/development/python-modules/setproctitle/default.nix
+++ b/pkgs/development/python-modules/setproctitle/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "setproctitle";
-  version = "1.2.2";
+  version = "1.2.3";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7dfb472c8852403d34007e01d6e3c68c57eb66433fb8a5c77b13b89a160d97df";
+    sha256 = "sha256-7PKLHAenmddvQyblCBV7ca7aB7hLkDaOpFHAcQ29MsA=";
   };
 
   checkInputs = [ pytestCheckHook ];
diff --git a/pkgs/development/python-modules/setuptools-rust/default.nix b/pkgs/development/python-modules/setuptools-rust/default.nix
index 10f46fecf6f48..04284a703b3c8 100644
--- a/pkgs/development/python-modules/setuptools-rust/default.nix
+++ b/pkgs/development/python-modules/setuptools-rust/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "setuptools-rust";
-  version = "1.3.0";
+  version = "1.4.1";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-lYxb9Ktkg9Wdq4iFOBIYccxQBjVKQvsPvVCs8Dyq0d4=";
+    sha256 = "sha256-GP+FCDH1juIdV4OCXJn61jLaIeR2RelCf9fewEgCnnY=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/setuptools-scm/default.nix b/pkgs/development/python-modules/setuptools-scm/default.nix
index 5fa082d82210c..229460e557233 100644
--- a/pkgs/development/python-modules/setuptools-scm/default.nix
+++ b/pkgs/development/python-modules/setuptools-scm/default.nix
@@ -2,6 +2,7 @@
 , callPackage
 , fetchPypi
 , packaging
+, typing-extensions
 , tomli
 , setuptools
 , lib
@@ -9,16 +10,17 @@
 
 buildPythonPackage rec {
   pname = "setuptools-scm";
-  version = "6.4.2";
+  version = "7.0.5";
 
   src = fetchPypi {
     pname = "setuptools_scm";
     inherit version;
-    sha256 = "sha256-aDOsZcbtlxGk1dImb4Akz6B8UzoOVfTBL27/KApanjA=";
+    sha256 = "sha256-Ax4Tr3cdb4krlBrbbqBFRbv5Hrxc5ox4qvP/9uH7SEQ=";
   };
 
   propagatedBuildInputs = [
     packaging
+    typing-extensions
     tomli
     setuptools
   ];
diff --git a/pkgs/development/python-modules/setuptools/default.nix b/pkgs/development/python-modules/setuptools/default.nix
index 772d9c79c2b11..883ca18e93e49 100644
--- a/pkgs/development/python-modules/setuptools/default.nix
+++ b/pkgs/development/python-modules/setuptools/default.nix
@@ -1,7 +1,6 @@
 { stdenv
 , buildPythonPackage
 , fetchFromGitHub
-, fetchpatch
 , python
 , bootstrapped-pip
 , lib
@@ -11,7 +10,7 @@
 
 let
   pname = "setuptools";
-  version = "61.2.0";
+  version = "63.2.0";
 
   # Create an sdist of setuptools
   sdist = stdenv.mkDerivation rec {
@@ -21,21 +20,13 @@ let
       owner = "pypa";
       repo = pname;
       rev = "v${version}";
-      hash = "sha256-Cgz3uA8U7A1lOZNuj1EYZVViZ3aL6VjcAno8GYQUufk=";
+      hash = "sha256-GyQjc0XulUxl3Btpj7Q6KHTpd1FDZnXCYviYjjgK7tY=";
       name = "${pname}-${version}-source";
     };
 
     patches = [
       ./tag-date.patch
       ./setuptools-distutils-C++.patch
-      # Use sysconfigdata to find headers. Fixes cross-compilation of extension modules.
-      # https://github.com/pypa/distutils/pull/145
-      (fetchpatch {
-        url = "https://github.com/pypa/distutils/commit/aed7294b7b0c228cc0666a8b04f2959bf310ab57.patch";
-        hash = "sha256-/9+TKv0nllBfnj48zcXLrOgyBj52dBIVbrpnIaQ4O84=";
-        stripLen = 2;
-        extraPrefix = "setuptools/_distutils/";
-      })
     ];
 
     buildPhase = ''
diff --git a/pkgs/development/python-modules/setuptools/setuptools-distutils-C++.patch b/pkgs/development/python-modules/setuptools/setuptools-distutils-C++.patch
index 43601d8b6eb19..ae844ecd2d3f1 100644
--- a/pkgs/development/python-modules/setuptools/setuptools-distutils-C++.patch
+++ b/pkgs/development/python-modules/setuptools/setuptools-distutils-C++.patch
@@ -1,78 +1,84 @@
 diff --git a/setuptools/_distutils/cygwinccompiler.py b/setuptools/_distutils/cygwinccompiler.py
-index c5c86d8f..b879e447 100644
+index 445e2e51..2fdbdcca 100644
 --- a/setuptools/_distutils/cygwinccompiler.py
 +++ b/setuptools/_distutils/cygwinccompiler.py
-@@ -124,14 +124,19 @@ class CygwinCCompiler(UnixCCompiler):
+@@ -131,14 +131,19 @@ class CygwinCCompiler(UnixCCompiler):
          self.cxx = os.environ.get('CXX', 'g++')
  
          self.linker_dll = self.cc
 +        self.linker_dll_cxx = self.cxx
          shared_option = "-shared"
  
-         self.set_executables(compiler='%s -mcygwin -O -Wall' % self.cc,
-                              compiler_so='%s -mcygwin -mdll -O -Wall' % self.cc,
-                              compiler_cxx='%s -mcygwin -O -Wall' % self.cxx,
-+                             compiler_so_cxx='%s -mcygwin -mdll -O -Wall' % self.cxx,
-                              linker_exe='%s -mcygwin' % self.cc,
-                              linker_so=('%s -mcygwin %s' %
--                                        (self.linker_dll, shared_option)))
-+                                        (self.linker_dll, shared_option)),
-+                             linker_exe_cxx='%s -mcygwin' % self.cxx,
-+                             linker_so_cxx=('%s -mcygwin %s' %
-+                                            (self.linker_dll_cxx, shared_option)))
+         self.set_executables(
+             compiler='%s -mcygwin -O -Wall' % self.cc,
+             compiler_so='%s -mcygwin -mdll -O -Wall' % self.cc,
+             compiler_cxx='%s -mcygwin -O -Wall' % self.cxx,
++            compiler_so_cxx='%s -mcygwin -mdll -O -Wall' % self.cxx,
+             linker_exe='%s -mcygwin' % self.cc,
+             linker_so=('%s -mcygwin %s' % (self.linker_dll, shared_option)),
++            linker_exe_cxx='%s -mcygwin' % self.cxx,
++            linker_so_cxx=('%s -mcygwin %s' %
++                (self.linker_dll_cxx, shared_option)),
+         )
  
          # Include the appropriate MSVC runtime library if Python was built
-         # with MSVC 7.0 or later.
-@@ -162,8 +167,12 @@ class CygwinCCompiler(UnixCCompiler):
+@@ -170,9 +175,12 @@ class CygwinCCompiler(UnixCCompiler):
                  raise CompileError(msg)
-         else: # for other files use the C-compiler
+         else:  # for other files use the C-compiler
              try:
--                self.spawn(self.compiler_so + cc_args + [src, '-o', obj] +
--                           extra_postargs)
+-                self.spawn(
+-                    self.compiler_so + cc_args + [src, '-o', obj] + extra_postargs
+-                )
 +                if self.detect_language(src) == 'c++':
 +                    self.spawn(self.compiler_so_cxx + cc_args + [src, '-o', obj] +
-+                               extra_postargs)
++                                   extra_postargs)
 +                else:
-+                    self.spawn(self.compiler_so + cc_args + [src, '-o', obj] +
-+                               extra_postargs)
++                    self.spawn(
++                        self.compiler_so + cc_args + [src, '-o', obj] + extra_postargs)
              except DistutilsExecError as msg:
                  raise CompileError(msg)
  
-@@ -279,9 +288,13 @@ class Mingw32CCompiler(CygwinCCompiler):
-         self.set_executables(compiler='%s -O -Wall' % self.cc,
-                              compiler_so='%s -mdll -O -Wall' % self.cc,
-                              compiler_cxx='%s -O -Wall' % self.cxx,
-+                             compiler_so_cxx='%s -mdll -O -Wall' % self.cxx,
-                              linker_exe='%s' % self.cc,
-                              linker_so='%s %s'
--                                        % (self.linker_dll, shared_option))
-+                                        % (self.linker_dll, shared_option),
-+                             linker_exe_cxx='%s' % self.cxx,
-+                             linker_so_cxx='%s %s'
-+                                        % (self.linker_dll_cxx, shared_option))
+@@ -323,9 +331,12 @@ class Mingw32CCompiler(CygwinCCompiler):
+         self.set_executables(
+             compiler='%s -O -Wall' % self.cc,
+             compiler_so='%s -mdll -O -Wall' % self.cc,
++            compiler_so_cxx='%s -mdll -O -Wall' % self.cxx,
+             compiler_cxx='%s -O -Wall' % self.cxx,
+             linker_exe='%s' % self.cc,
+             linker_so='%s %s' % (self.linker_dll, shared_option),
++            linker_exe_cxx='%s' % self.cxx,
++            linker_so_cxx='%s %s' % (self.linker_dll_cxx, shared_option)
+         )
  
          # Maybe we should also append -mthreads, but then the finished
-         # dlls need another dll (mingwm10.dll see Mingw32 docs)
 diff --git a/setuptools/_distutils/sysconfig.py b/setuptools/_distutils/sysconfig.py
-index 9fad3835..889e2595 100644
+index e41d51ee..f7ded14b 100644
 --- a/setuptools/_distutils/sysconfig.py
 +++ b/setuptools/_distutils/sysconfig.py
-@@ -216,9 +216,11 @@ def customize_compiler(compiler):
-                 _osx_support.customize_compiler(_config_vars)
-                 _config_vars['CUSTOMIZED_OSX_COMPILER'] = 'True'
+@@ -280,6 +280,7 @@ def customize_compiler(compiler):
+             cflags,
+             ccshared,
+             ldshared,
++            ldcxxshared,
+             shlib_suffix,
+             ar,
+             ar_flags,
+@@ -289,11 +290,14 @@ def customize_compiler(compiler):
+             'CFLAGS',
+             'CCSHARED',
+             'LDSHARED',
++            'LDCXXSHARED',
+             'SHLIB_SUFFIX',
+             'AR',
+             'ARFLAGS',
+         )
  
--        (cc, cxx, cflags, ccshared, ldshared, shlib_suffix, ar, ar_flags) = \
--            get_config_vars('CC', 'CXX', 'CFLAGS',
--                            'CCSHARED', 'LDSHARED', 'SHLIB_SUFFIX', 'AR', 'ARFLAGS')
-+        (cc, cxx, cflags, ccshared, ldshared, ldcxxshared, shlib_suffix, ar, ar_flags) = \
-+            get_config_vars('CC', 'CXX', 'CFLAGS', 'CCSHARED', 'LDSHARED', 'LDCXXSHARED',
-+                            'SHLIB_SUFFIX', 'AR', 'ARFLAGS')
-+
 +        cxxflags = cflags
- 
++
          if 'CC' in os.environ:
              newcc = os.environ['CC']
-@@ -232,19 +234,27 @@ def customize_compiler(compiler):
+             if 'LDSHARED' not in os.environ and ldshared.startswith(cc):
+@@ -305,19 +309,27 @@ def customize_compiler(compiler):
              cxx = os.environ['CXX']
          if 'LDSHARED' in os.environ:
              ldshared = os.environ['LDSHARED']
@@ -81,7 +87,7 @@ index 9fad3835..889e2595 100644
          if 'CPP' in os.environ:
              cpp = os.environ['CPP']
          else:
-             cpp = cc + " -E"           # not always
+             cpp = cc + " -E"  # not always
          if 'LDFLAGS' in os.environ:
              ldshared = ldshared + ' ' + os.environ['LDFLAGS']
 +            ldcxxshared = ldcxxshared + ' ' + os.environ['LDFLAGS']
@@ -101,7 +107,7 @@ index 9fad3835..889e2595 100644
          if 'AR' in os.environ:
              ar = os.environ['AR']
          if 'ARFLAGS' in os.environ:
-@@ -253,13 +263,17 @@ def customize_compiler(compiler):
+@@ -326,13 +338,17 @@ def customize_compiler(compiler):
              archiver = ar + ' ' + ar_flags
  
          cc_cmd = cc + ' ' + cflags
@@ -114,61 +120,46 @@ index 9fad3835..889e2595 100644
 +            compiler_cxx=cxx_cmd,
 +            compiler_so_cxx=cxx_cmd + ' ' + ccshared,
              linker_so=ldshared,
-             linker_exe=cc,
 +            linker_so_cxx=ldcxxshared,
+             linker_exe=cc,
 +            linker_exe_cxx=cxx,
-             archiver=archiver)
+             archiver=archiver,
+         )
  
-         if 'RANLIB' in os.environ and compiler.executables.get('ranlib', None):
 diff --git a/setuptools/_distutils/unixccompiler.py b/setuptools/_distutils/unixccompiler.py
-index 715408f5..6125a1eb 100644
+index 4be74fdf..66f95aef 100644
 --- a/setuptools/_distutils/unixccompiler.py
 +++ b/setuptools/_distutils/unixccompiler.py
-@@ -110,14 +110,17 @@ class UnixCCompiler(CCompiler):
-     # are pretty generic; they will probably have to be set by an outsider
-     # (eg. using information discovered by the sysconfig about building
-     # Python extensions).
--    executables = {'preprocessor' : None,
--                   'compiler'     : ["cc"],
--                   'compiler_so'  : ["cc"],
--                   'compiler_cxx' : ["cc"],
--                   'linker_so'    : ["cc", "-shared"],
--                   'linker_exe'   : ["cc"],
--                   'archiver'     : ["ar", "-cr"],
--                   'ranlib'       : None,
-+    executables = {'preprocessor'    : None,
-+                   'compiler'        : ["cc"],
-+                   'compiler_so'     : ["cc"],
-+                   'compiler_cxx'    : ["c++"],
-+                   'compiler_so_cxx' : ["c++"],
-+                   'linker_so'       : ["cc", "-shared"],
-+                   'linker_exe'      : ["cc"],
-+                   'linker_so_cxx'   : ["c++", "-shared"],
-+                   'linker_exe_cxx'  : ["c++"],
-+                   'archiver'        : ["ar", "-cr"],
-+                   'ranlib'          : None,
-                   }
+@@ -112,9 +112,12 @@ class UnixCCompiler(CCompiler):
+         'preprocessor': None,
+         'compiler': ["cc"],
+         'compiler_so': ["cc"],
+-        'compiler_cxx': ["cc"],
++        'compiler_cxx': ["c++"],
++        'compiler_so_cxx': ["c++"],
+         'linker_so': ["cc", "-shared"],
++        'linker_so_cxx': ["c++", "-shared"],
+         'linker_exe': ["cc"],
++        'linker_exe_cxx': ["c++", "-shared"],
+         'archiver': ["ar", "-cr"],
+         'ranlib': None,
+     }
+@@ -174,8 +177,13 @@ class UnixCCompiler(CCompiler):
  
-     if sys.platform[:6] == "darwin":
-@@ -169,9 +172,15 @@ class UnixCCompiler(CCompiler):
      def _compile(self, obj, src, ext, cc_args, extra_postargs, pp_opts):
-         compiler_so = compiler_fixup(
-             self.compiler_so, cc_args + extra_postargs)
-+        compiler_so_cxx = compiler_fixup(
-+            self.compiler_so_cxx, cc_args + extra_postargs)
+         compiler_so = compiler_fixup(self.compiler_so, cc_args + extra_postargs)
++        compiler_so_cxx = compiler_fixup(self.compiler_so_cxx, cc_args + extra_postargs)
          try:
--            self.spawn(compiler_so + cc_args + [src, '-o', obj] +
--                       extra_postargs)
+-            self.spawn(compiler_so + cc_args + [src, '-o', obj] + extra_postargs)
 +            if self.detect_language(src) == 'c++':
 +                self.spawn(compiler_so_cxx + cc_args + [ src, '-o', obj] +
-+                           extra_postargs)
++                               extra_postargs)
 +            else:
-+                self.spawn(compiler_so + cc_args + [src, '-o', obj] +
-+                           extra_postargs)
++                self.spawn(compiler_so + cc_args + [src, '-o', obj] + extra_postargs)
          except DistutilsExecError as msg:
              raise CompileError(msg)
  
-@@ -233,7 +242,8 @@ class UnixCCompiler(CCompiler):
+@@ -243,7 +251,8 @@ class UnixCCompiler(CCompiler):
                  # building an executable or linker_so (with shared options)
                  # when building a shared library.
                  building_exe = target_desc == CCompiler.EXECUTABLE
diff --git a/pkgs/development/python-modules/shap/default.nix b/pkgs/development/python-modules/shap/default.nix
index fbd43953b5924..3041a7d92a74f 100644
--- a/pkgs/development/python-modules/shap/default.nix
+++ b/pkgs/development/python-modules/shap/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "shap";
-  version = "0.40.0";
+  version = "0.41.0";
   disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "slundberg";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0ra0dp319qj13wxaqh2vz4xhn59m9h3bfg1m6wf3cxsix737b1k4";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-rYVWQ3VRvIObSQPwDRsxhTOGOKNkYkLtiHzVwoB3iJ0=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/shtab/default.nix b/pkgs/development/python-modules/shtab/default.nix
index 4051378d06892..f5a276497502a 100644
--- a/pkgs/development/python-modules/shtab/default.nix
+++ b/pkgs/development/python-modules/shtab/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "shtab";
-  version = "1.5.4";
+  version = "1.5.5";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -18,8 +18,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "iterative";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-MYLAQSz55913fOhRnH+Y9xugOdfO43gkavitazIgeqg=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-I6De64eawNi36c8NiyVxj63PkxnZfUYYT4Dw4l42Ztk=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
diff --git a/pkgs/development/python-modules/sigtools/default.nix b/pkgs/development/python-modules/sigtools/default.nix
index 49ba916b481ca..e1a0cc33821b7 100644
--- a/pkgs/development/python-modules/sigtools/default.nix
+++ b/pkgs/development/python-modules/sigtools/default.nix
@@ -5,20 +5,29 @@
 , mock
 , coverage
 , unittest2
+, attrs
 , funcsigs
 , six
+, setuptools-scm
 }:
 
 buildPythonPackage rec {
   pname = "sigtools";
-  version = "2.0.3";
+  version = "4.0.0";
+  format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e7789628ec0d02e421bca76532b0d5da149f96f09e7ed4a5cbf318624b75e949";
+    sha256 = "sha256-fMhKC6VuNLfxXkM3RCaPEODEp21r/s6JzswaHKkROLY=";
   };
 
-  propagatedBuildInputs = [ funcsigs six ];
+  nativeBuildInputs = [
+    setuptools-scm
+  ];
+
+  propagatedBuildInputs = [
+    attrs
+  ];
 
   patchPhase = ''sed -i s/test_suite="'"sigtools.tests"'"/test_suite="'"unittest2.collector"'"/ setup.py'';
 
diff --git a/pkgs/development/python-modules/siosocks/default.nix b/pkgs/development/python-modules/siosocks/default.nix
index 4292c167782a0..d588c2dff6254 100644
--- a/pkgs/development/python-modules/siosocks/default.nix
+++ b/pkgs/development/python-modules/siosocks/default.nix
@@ -30,6 +30,13 @@ buildPythonPackage rec {
     pytest-trio
   ];
 
+  disabledTests = [
+    # network access
+    "test_connection_direct_success"
+    "test_connection_socks_success"
+    "test_connection_socks_failed"
+  ];
+
   disabledTestPaths = [
     # Timeout on Hydra
     "tests/test_trio.py"
diff --git a/pkgs/development/python-modules/sip/default.nix b/pkgs/development/python-modules/sip/default.nix
index d6ee1e76f5480..3566be620e286 100644
--- a/pkgs/development/python-modules/sip/default.nix
+++ b/pkgs/development/python-modules/sip/default.nix
@@ -1,13 +1,13 @@
-{ lib, stdenv, fetchPypi, buildPythonPackage, packaging, toml }:
+{ lib, stdenv, fetchPypi, buildPythonPackage, packaging, ply, toml }:
 
 buildPythonPackage rec {
   pname = "sip";
-  version = "6.5.1";
+  version = "6.6.2";
 
   src = fetchPypi {
     pname = "sip";
     inherit version;
-    sha256 = "sha256-IE8CQNuJmadJ1jiph7NRhhhD5pI5uBHsPRiBQSw3BqY=";
+    sha256 = "sha256-Dj76wcXf2OUlrlcUCSffJpk+E/WLidFXfDFPQQW/2Q0=";
   };
 
   patches = [
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     ./fix-manylinux-version.patch
   ];
 
-  propagatedBuildInputs = [ packaging toml ];
+  propagatedBuildInputs = [ packaging ply toml ];
 
   # There aren't tests
   doCheck = false;
diff --git a/pkgs/development/python-modules/snowflake-connector-python/default.nix b/pkgs/development/python-modules/snowflake-connector-python/default.nix
index 304a1c36894f2..500a392b11626 100644
--- a/pkgs/development/python-modules/snowflake-connector-python/default.nix
+++ b/pkgs/development/python-modules/snowflake-connector-python/default.nix
@@ -46,7 +46,8 @@ buildPythonPackage rec {
   postPatch = ''
     substituteInPlace setup.cfg \
       --replace "pyOpenSSL>=16.2.0,<23.0.0" "pyOpenSSL" \
-      --replace "cryptography>=3.1.0,<37.0.0" "cryptography"
+      --replace "cryptography>=3.1.0,<37.0.0" "cryptography" \
+      --replace "charset-normalizer~=2.0.0" "charset_normalizer>=2"
   '';
 
   # Tests require encrypted secrets, see
diff --git a/pkgs/development/python-modules/solax/default.nix b/pkgs/development/python-modules/solax/default.nix
index e76df373bf126..6a8c483ada848 100644
--- a/pkgs/development/python-modules/solax/default.nix
+++ b/pkgs/development/python-modules/solax/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "solax";
-  version = "0.2.9";
+  version = "0.2.10";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e66db0c5d4ec840b047e574f0325ea01862d1f5563a844510541b35faa55f392";
+    sha256 = "sha256-DUXaz9BF1NOG+RSeks9CxLGDz/wWwpZBxwWh4MQapio=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/soupsieve/default.nix b/pkgs/development/python-modules/soupsieve/default.nix
index 8d92e49427aff..632894e8697ab 100644
--- a/pkgs/development/python-modules/soupsieve/default.nix
+++ b/pkgs/development/python-modules/soupsieve/default.nix
@@ -1,20 +1,24 @@
 { lib
 , buildPythonPackage
 , fetchPypi
+, hatchling
 , isPy3k
 , backports_functools_lru_cache
 }:
 
 buildPythonPackage rec {
   pname = "soupsieve";
-  version = "2.3.1";
+  version = "2.3.2.post1";
+  format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b8d49b1cd4f037c7082a9683dfa1801aa2597fb11c3a1155b7a5b94829b4f1f9";
+    sha256 = "sha256-/FOJOz2iwz3ilWZ6DhnweMFL+GVErzBzVN5fzxKj8w0=";
   };
 
-  propagatedBuildInputs = lib.optional (!isPy3k) backports_functools_lru_cache;
+  nativeBuildInputs = [
+    hatchling
+  ];
 
   # Circular dependency on beautifulsoup4
   doCheck = false;
diff --git a/pkgs/development/python-modules/spacy-pkuseg/default.nix b/pkgs/development/python-modules/spacy-pkuseg/default.nix
index 969338d41062a..30778ab633dc9 100644
--- a/pkgs/development/python-modules/spacy-pkuseg/default.nix
+++ b/pkgs/development/python-modules/spacy-pkuseg/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "spacy-pkuseg";
-  version = "0.0.28";
+  version = "0.0.31";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit version;
     pname = "spacy_pkuseg";
-    hash = "sha256-mmA/baY9ohvrM41ak5L+G8CUrSQeZCrzmMAoND4X/NI=";
+    hash = "sha256-C/6uYeXjmmZiWFIvk/2P8+CEX4ZBhYNnRX1T4rD75N8=";
   };
 
   # Does not seem to have actual tests, but unittest discover
diff --git a/pkgs/development/python-modules/spacy/default.nix b/pkgs/development/python-modules/spacy/default.nix
index ee8b773c8b853..e4f5868d84575 100644
--- a/pkgs/development/python-modules/spacy/default.nix
+++ b/pkgs/development/python-modules/spacy/default.nix
@@ -31,14 +31,14 @@
 
 buildPythonPackage rec {
   pname = "spacy";
-  version = "3.3.1";
+  version = "3.4.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-f4fb2xBNhRrmul/Tp2ouFOIuBIE1kD6YuvCFcaOqgcA=";
+    hash = "sha256-PM0an1Z1nl8Pnv31cRmgZwKtWcBF3eCzgwtUclk+Ce8=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/sphinx-autodoc-typehints/default.nix b/pkgs/development/python-modules/sphinx-autodoc-typehints/default.nix
new file mode 100644
index 0000000000000..7696369763851
--- /dev/null
+++ b/pkgs/development/python-modules/sphinx-autodoc-typehints/default.nix
@@ -0,0 +1,47 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, pythonOlder
+, sphinx
+, pytestCheckHook
+}:
+
+let
+  pname = "sphinx-autodoc-typehints";
+  version = "1.18.3";
+in
+
+buildPythonPackage {
+  inherit pname version;
+  format = "pyproject";
+
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    pname = "sphinx_autodoc_typehints";
+    inherit version;
+    hash = "sha256-wE2PjXDpiJYOJbIGrzmpDfhOfiwIW7JOEjvDaEAhsxM=";
+  };
+
+  propagatedBuildInputs = [
+    sphinx
+  ];
+
+  checkInputs = [
+    pytestCheckHook
+  ];
+
+  # requires spobjinv, nbtyping
+  doCheck = false;
+
+  pythonImportsCheck = [
+    "sphinx_autodoc_typehints"
+  ];
+
+  meta = with lib; {
+    description = "Type hints (PEP 484) support for the Sphinx autodoc extension";
+    homepage = "https://github.com/tox-dev/sphinx-autodoc-typehints";
+    license = licenses.mit;
+    maintainers = with maintainers; [ hexa ];
+  };
+}
diff --git a/pkgs/development/python-modules/sphinx-jupyterbook-latex/default.nix b/pkgs/development/python-modules/sphinx-jupyterbook-latex/default.nix
index 937b6cf5d304a..b087ed2bd39ed 100644
--- a/pkgs/development/python-modules/sphinx-jupyterbook-latex/default.nix
+++ b/pkgs/development/python-modules/sphinx-jupyterbook-latex/default.nix
@@ -9,6 +9,7 @@
 buildPythonPackage rec {
   pname = "sphinx-jupyterbook-latex";
   version = "0.4.6";
+  format = "pyproject";
 
   disabled = pythonOlder "3.6";
 
@@ -18,6 +19,11 @@ buildPythonPackage rec {
     sha256 = "8ff3775b11ab4798e6e8ec983601d7aea4c3b8e8b5d28ca758578ede3a791334";
   };
 
+  postPatch = ''
+    substituteInPlace setup.cfg \
+      --replace "sphinx>=3,<5" "sphinx>=3"
+  '';
+
   propagatedBuildInputs = [ sphinx ]
     ++ lib.optionals (pythonOlder "3.9") [ importlib-resources ];
 
diff --git a/pkgs/development/python-modules/sphinx/default.nix b/pkgs/development/python-modules/sphinx/default.nix
index 40f17f10cfc89..166f9347d719e 100644
--- a/pkgs/development/python-modules/sphinx/default.nix
+++ b/pkgs/development/python-modules/sphinx/default.nix
@@ -3,6 +3,7 @@
 , buildPythonPackage
 , pythonOlder
 , fetchFromGitHub
+, fetchpatch
 # propagatedBuildInputs
 , babel
 , alabaster
@@ -30,7 +31,7 @@
 
 buildPythonPackage rec {
   pname = "sphinx";
-  version = "4.5.0";
+  version = "5.0.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -38,8 +39,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "sphinx-doc";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-Lw9yZWCQpt02SL/McWPcyFRfVhQHC0TejcYRbVw+VxY=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-kdwznYvs4szhC+qoL2Zsib9cU69fag1KhCXl8qIGkZU=";
     postFetch = ''
       cd $out
       mv tests/roots/test-images/testimäge.png \
@@ -48,9 +49,18 @@ buildPythonPackage rec {
     '';
   };
 
+  patches = [
+    # https://github.com/sphinx-doc/sphinx/pull/10624
+    (fetchpatch {
+      name = "avoid-deprecated-docutils-0.19-api.patch";
+      sha256 = "sha256-QIrLkxnexNcfuI00UOeCpAamMLqqt4wxoVY1VA72jIw=";
+      url = "https://github.com/sphinx-doc/sphinx/commit/8d99168794ab8be0de1e6281d1b76af8177acd3d.patch";
+    })
+  ];
+
   postPatch = ''
     substituteInPlace setup.py \
-      --replace "docutils>=0.14,<0.18" "docutils>=0.14"
+      --replace "docutils>=0.14,<0.19" "docutils>=0.14"
 
     # remove impurity caused by date inclusion
     # https://github.com/sphinx-doc/sphinx/blob/master/setup.cfg#L4-L6
diff --git a/pkgs/development/python-modules/sphinxcontrib-plantuml/default.nix b/pkgs/development/python-modules/sphinxcontrib-plantuml/default.nix
index df05cd27364b8..20f182b55bafc 100644
--- a/pkgs/development/python-modules/sphinxcontrib-plantuml/default.nix
+++ b/pkgs/development/python-modules/sphinxcontrib-plantuml/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "sphinxcontrib-plantuml";
-  version = "0.23";
+  version = "0.24";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-HVVRjwqG7NbJa6j/jIhK3KBbrD5Y52ppKjzRmqf0Ks8=";
+    sha256 = "sha256-z2Xbc1j3haZJjuA+cZi2aAxiXSjlWzNHX8P2yUNRRR0=";
   };
 
   # No tests included.
diff --git a/pkgs/development/python-modules/spyder-kernels/default.nix b/pkgs/development/python-modules/spyder-kernels/default.nix
index 2d4328ba3e16e..3742d15b356a7 100644
--- a/pkgs/development/python-modules/spyder-kernels/default.nix
+++ b/pkgs/development/python-modules/spyder-kernels/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "spyder-kernels";
-  version = "2.3.0";
+  version = "2.3.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-pdU20Oil53TX1hbBAqj6LWqkX9MwoLeZuY7vFYNW02w=";
+    sha256 = "sha256-urI7Ak25NZzsUYLiR+cIdfcd3ECoJx/RNT3gj0QPJtw=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/spyder/default.nix b/pkgs/development/python-modules/spyder/default.nix
index eaca9e6c7f408..edcee3fe93230 100644
--- a/pkgs/development/python-modules/spyder/default.nix
+++ b/pkgs/development/python-modules/spyder/default.nix
@@ -46,13 +46,13 @@
 
 buildPythonPackage rec {
   pname = "spyder";
-  version = "5.3.0";
+  version = "5.3.2";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ggCFvYUdUm5fVSpTZoN/OhNPJAQOyehwrQprYTzprbc=";
+    sha256 = "sha256-KJkamNMXr4Mi9Y6B7aKExoiqWKoExCFlELChCrQL6mQ=";
   };
 
   nativeBuildInputs = [ pyqtwebengine.wrapQtAppsHook ];
diff --git a/pkgs/development/python-modules/sqlalchemy-continuum/default.nix b/pkgs/development/python-modules/sqlalchemy-continuum/default.nix
index da64d44a43fe6..d0970d4277d88 100644
--- a/pkgs/development/python-modules/sqlalchemy-continuum/default.nix
+++ b/pkgs/development/python-modules/sqlalchemy-continuum/default.nix
@@ -3,7 +3,7 @@
 , buildPythonPackage
 , flask
 , flask_login
-, flask_sqlalchemy
+, flask-sqlalchemy
 , flexmock
 , pytestCheckHook
 , sqlalchemy
@@ -33,7 +33,7 @@ buildPythonPackage rec {
     sqlalchemy-i18n
     flask
     flask_login
-    flask_sqlalchemy
+    flask-sqlalchemy
     flexmock
   ];
 
diff --git a/pkgs/development/python-modules/sqlalchemy-utils/default.nix b/pkgs/development/python-modules/sqlalchemy-utils/default.nix
index c53ab7c41223c..49bba2811312c 100644
--- a/pkgs/development/python-modules/sqlalchemy-utils/default.nix
+++ b/pkgs/development/python-modules/sqlalchemy-utils/default.nix
@@ -17,12 +17,12 @@
 
 buildPythonPackage rec {
   pname = "sqlalchemy-utils";
-  version = "0.38.2";
+  version = "0.38.3";
 
   src = fetchPypi {
     inherit version;
     pname = "SQLAlchemy-Utils";
-    sha256 = "9e01d6d3fb52d3926fcd4ea4a13f3540701b751aced0316bff78264402c2ceb4";
+    sha256 = "sha256-n5r7pgekBFXPcDrfqYRlhL8mFooMWmCnAGO3DWUFH00=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/sqlalchemy-utils/skip-database-tests.patch b/pkgs/development/python-modules/sqlalchemy-utils/skip-database-tests.patch
index 887128dd44ce8..79aa12f03d99e 100644
--- a/pkgs/development/python-modules/sqlalchemy-utils/skip-database-tests.patch
+++ b/pkgs/development/python-modules/sqlalchemy-utils/skip-database-tests.patch
@@ -2,13 +2,15 @@ diff --git a/conftest.py b/conftest.py
 index 9e146cd..8dbc9a5 100644
 --- a/conftest.py
 +++ b/conftest.py
-@@ -61,16 +61,12 @@ def mysql_db_user():
+@@ -61,17 +61,12 @@ def mysql_db_user():
  
  @pytest.fixture
- def postgresql_dsn(postgresql_db_user, postgresql_db_password, db_name):
--    return 'postgresql://{0}:{1}@localhost/{2}'.format(
+ def postgresql_dsn(postgresql_db_user, postgresql_db_password, postgresql_db_host,
+                    db_name):
+-    return 'postgresql://{0}:{1}@{2}/{3}'.format(
 -        postgresql_db_user,
 -        postgresql_db_password,
+-        postgresql_db_host,
 -        db_name
 -    )
 +    pytest.skip()
@@ -68,7 +70,7 @@ index 0ad6721..83f208d 100644
                  'TEMPLATE "my-template"') in str(excinfo.value)
  
  
--class TestDatabasePostgresCreateDatabaseCloseConnection(object):
+-class TestDatabasePostgresCreateDatabaseCloseConnection:
 -    def test_create_database_twice(
 -        self,
 -        postgresql_db_user,
diff --git a/pkgs/development/python-modules/stanza/default.nix b/pkgs/development/python-modules/stanza/default.nix
index ce9719a75210a..808f90f224503 100644
--- a/pkgs/development/python-modules/stanza/default.nix
+++ b/pkgs/development/python-modules/stanza/default.nix
@@ -13,13 +13,13 @@
 
 buildPythonPackage rec {
   pname = "stanza";
-  version = "1.3.0";
+  version = "1.4.0";
 
   src = fetchFromGitHub {
     owner = "stanfordnlp";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "1j5918n875p3ibhzc5zp3vb97asbbnb04pj1igxwzl0xm6qcsbh8";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-EAES3UpJqE7wmvCPycFhwI1lMrReN+L6W8CEDwdHTlA=";
   };
 
   disabled = pythonOlder "3.6";
diff --git a/pkgs/development/python-modules/starlette/default.nix b/pkgs/development/python-modules/starlette/default.nix
index 05c3cd829f9be..d1e8f789fc38c 100644
--- a/pkgs/development/python-modules/starlette/default.nix
+++ b/pkgs/development/python-modules/starlette/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "starlette";
-  version = "0.20.1";
+  version = "0.20.4";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -29,8 +29,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "encode";
     repo = pname;
-    rev = version;
-    hash = "sha256-PUZ9joOhXkL1K2yi0baiuY74PIi71V/epX8zdcUv1DA=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-vP2TJPn9lRGnLGkO8lUmnsoT6rSnhuWDD3WqNk76SM0=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/statmake/default.nix b/pkgs/development/python-modules/statmake/default.nix
index 13187285db31f..ac21b4c62ed70 100644
--- a/pkgs/development/python-modules/statmake/default.nix
+++ b/pkgs/development/python-modules/statmake/default.nix
@@ -2,6 +2,7 @@
 , attrs
 , buildPythonPackage
 , cattrs
+, exceptiongroup
 , fetchFromGitHub
 , fonttools
 , fs
@@ -15,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "statmake";
-  version = "0.4.1";
+  version = "0.5.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -23,8 +24,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "daltonmaag";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-OXhoQAD4LEh80iRUZE2z8sCtWJDv/bSo0bwHbOOPVE0=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-BpxjAr65ZQEJ0PSUIPtS78UvJbMG91qkV8py2K/+W2E=";
   };
 
   nativeBuildInputs = [
@@ -37,6 +38,8 @@ buildPythonPackage rec {
     fonttools
     # required by fonttools[ufo]
     fs
+  ] ++ lib.optionals (pythonOlder "3.11") [
+    exceptiongroup
   ] ++ lib.optionals (pythonOlder "3.8") [
     importlib-metadata
   ];
diff --git a/pkgs/development/python-modules/stevedore/default.nix b/pkgs/development/python-modules/stevedore/default.nix
index 66f99c7b01ec8..e7611fc2329eb 100644
--- a/pkgs/development/python-modules/stevedore/default.nix
+++ b/pkgs/development/python-modules/stevedore/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "stevedore";
-  version = "3.5.0";
+  version = "4.0.0";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-9AJTiH2HEuqiuw6jgwN0QWc23I7A4i9aZQksEXTEQzU=";
+    sha256 = "sha256-+CzJmh/1UjENGcN5gnwsZN2fhaOLzVVZ2yRwFhhnt4Y=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/structlog/default.nix b/pkgs/development/python-modules/structlog/default.nix
index 2bc61dac161e3..4b8bb15df0e54 100644
--- a/pkgs/development/python-modules/structlog/default.nix
+++ b/pkgs/development/python-modules/structlog/default.nix
@@ -1,12 +1,13 @@
 { lib
 , buildPythonPackage
 , fetchFromGitHub
+, pythonOlder
 , pytestCheckHook
 , pytest-asyncio
 , pretend
 , freezegun
 , simplejson
-, six
+, typing-extensions
 , pythonAtLeast
 }:
 
@@ -22,9 +23,25 @@ buildPythonPackage rec {
     sha256 = "0bc5lj0732j0hjq89llgrncyzs6k3aaffvg07kr3la44w0hlrb4l";
   };
 
-  propagatedBuildInputs = [ six ];
+  propagatedBuildInputs = lib.optionals (pythonOlder "3.8") [
+    typing-extensions
+  ];
 
-  checkInputs = [ pytestCheckHook pytest-asyncio pretend freezegun simplejson ];
+  pythonImportsCheck = [
+    "structlog"
+  ];
+
+  checkInputs = [
+    freezegun
+    pretend
+    pytest-asyncio
+    pytestCheckHook
+    simplejson
+  ];
+
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
 
   meta = with lib; {
     description = "Painless structural logging";
diff --git a/pkgs/development/python-modules/subarulink/default.nix b/pkgs/development/python-modules/subarulink/default.nix
index 72101eaf29d89..f25322531789e 100644
--- a/pkgs/development/python-modules/subarulink/default.nix
+++ b/pkgs/development/python-modules/subarulink/default.nix
@@ -36,6 +36,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   postPatch = ''
     substituteInPlace setup.cfg \
       --replace "--cov=subarulink" ""
diff --git a/pkgs/development/python-modules/subprocess-tee/default.nix b/pkgs/development/python-modules/subprocess-tee/default.nix
index aae41b915beb5..adc4cae187bc0 100644
--- a/pkgs/development/python-modules/subprocess-tee/default.nix
+++ b/pkgs/development/python-modules/subprocess-tee/default.nix
@@ -27,6 +27,8 @@ buildPythonPackage rec {
   disabledTests = [
     # cyclic dependency on `molecule` (see https://github.com/pycontribs/subprocess-tee/issues/50)
     "test_molecule"
+    # duplicates in console output, rich issue
+    "test_rich_console_ex"
   ];
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/sumo/default.nix b/pkgs/development/python-modules/sumo/default.nix
index 86ab922c1bfb6..430f20c5bfa71 100644
--- a/pkgs/development/python-modules/sumo/default.nix
+++ b/pkgs/development/python-modules/sumo/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "sumo";
-  version = "2.3.0";
+  version = "2.3.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "SMTG-UCL";
     repo = "sumo";
     rev = "refs/tags/v${version}";
-    sha256 = "sha256-apI5Qt7Wrr4FXKL48iqqIQJDX2BIf3PPz/qIgSO7nuo=";
+    sha256 = "sha256-hY1rQG4s5j/lVvu5e+5e+GamKrYpviqxaWmq1qB6ejU=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/superqt/default.nix b/pkgs/development/python-modules/superqt/default.nix
index 1386706a33179..4b59951048848 100644
--- a/pkgs/development/python-modules/superqt/default.nix
+++ b/pkgs/development/python-modules/superqt/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "superqt";
-  version = "0.3.2";
+  version = "0.3.3";
 
   src = fetchFromGitHub {
     owner = "napari";
     repo = pname;
     rev = "refs/tags/v${version}";
-    sha256 = "sha256-P1uKQaYgXVTE7DK5w4Ct4aJyfdQ6jUPfaTOcYkpo9pc=";
+    sha256 = "sha256-Ns3AFUL0BReIwTHfrlfXr/2GLtLvT7hfSjjh+r7btcY=";
   };
   format = "pyproject";
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/tableaudocumentapi/default.nix b/pkgs/development/python-modules/tableaudocumentapi/default.nix
index 06a445450e5c7..cf9a55d7391c0 100644
--- a/pkgs/development/python-modules/tableaudocumentapi/default.nix
+++ b/pkgs/development/python-modules/tableaudocumentapi/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "tableaudocumentapi";
-  version = "0.9";
+  version = "0.10";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0c7d01f01758dd6e50ff2fc915c6087c0da17298635e6635581aaf25c934d6ce";
+    sha256 = "sha256-ahR+o4UgFLm/9aFsEqmlwXkcgTjqI0wU2Tl9EjVjLZs=";
   };
 
   # tests not inclued with release
diff --git a/pkgs/development/python-modules/tabulate/default.nix b/pkgs/development/python-modules/tabulate/default.nix
index 621445b2d516b..462782d3b9741 100644
--- a/pkgs/development/python-modules/tabulate/default.nix
+++ b/pkgs/development/python-modules/tabulate/default.nix
@@ -5,12 +5,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.8.9";
+  version = "0.8.10";
   pname = "tabulate";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "eb1d13f25760052e8931f2ef80aaf6045a6cceb47514db8beab24cded16f13a7";
+    sha256 = "sha256-bFfz8916wngncBVfOtstsLGiaWN+QvJ1mZJeZLEU9Rk=";
   };
 
   checkInputs = [ nose ];
diff --git a/pkgs/development/python-modules/taskw/default.nix b/pkgs/development/python-modules/taskw/default.nix
index ac8a55e24d803..0d4cd9c09e945 100644
--- a/pkgs/development/python-modules/taskw/default.nix
+++ b/pkgs/development/python-modules/taskw/default.nix
@@ -11,12 +11,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.3.1";
+  version = "2.0.0";
   pname = "taskw";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1a68e49cac2d4f6da73c0ce554fd6f94932d95e20596f2ee44a769a28c12ba7d";
+    sha256 = "sha256-EQm9+b3nqbMqUAejAsh4MD/2UYi2QiWsdKMomkxUi90=";
   };
 
   patches = [ ./use-template-for-taskwarrior-install-path.patch ];
diff --git a/pkgs/development/python-modules/tempora/default.nix b/pkgs/development/python-modules/tempora/default.nix
index ff837158fc268..8b50406c7eace 100644
--- a/pkgs/development/python-modules/tempora/default.nix
+++ b/pkgs/development/python-modules/tempora/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "tempora";
-  version = "5.0.1";
+  version = "5.0.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-y6Dxl6ZIg78+c2V++8AyTVvxcXnndpsThbTXXSbNkSc=";
+    sha256 = "sha256-MfpbszsmQQJiEfI+gI64vTUZAZiLFn1F8yPI9FDs8hE=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/tensorboard-plugin-profile/default.nix b/pkgs/development/python-modules/tensorboard-plugin-profile/default.nix
index f31c42e774b7b..a32be33a37a81 100644
--- a/pkgs/development/python-modules/tensorboard-plugin-profile/default.nix
+++ b/pkgs/development/python-modules/tensorboard-plugin-profile/default.nix
@@ -6,7 +6,7 @@
 
 buildPythonPackage rec {
   pname = "tensorboard_plugin_profile";
-  version = "2.5.0";
+  version = "2.8.0";
   format = "wheel";
 
   src = fetchPypi {
@@ -14,7 +14,7 @@ buildPythonPackage rec {
     format = "wheel";
     dist = "py3";
     python = "py3";
-    sha256 = "16jch9py98h7wrffdiz6j0i3kdykxdp5m0kfxr1fxy2phqanpjqk";
+    hash = "sha256-2LzXSdPrzS5G63ONvchdEL4aJD75eU9dF1pMqLcfbto=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/tensorboard/default.nix b/pkgs/development/python-modules/tensorboard/default.nix
index 42fe33dcab69c..4e7087deb3268 100644
--- a/pkgs/development/python-modules/tensorboard/default.nix
+++ b/pkgs/development/python-modules/tensorboard/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "tensorboard";
-  version = "2.9.0";
+  version = "2.9.1";
   format = "wheel";
   disabled = pythonOlder "3.6" || pythonAtLeast "3.11";
 
@@ -31,7 +31,7 @@ buildPythonPackage rec {
     inherit pname version format;
     dist = "py3";
     python = "py3";
-    hash = "sha256-vXghEHbcpe+icmCvrPqpbNBcfbEqbAnMdqHWsph8piE=";
+    hash = "sha256-uqcn95F3b55YQdNHEncgzu1LvVnDa0BgS5X7KuYCknY=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/tensorboardx/default.nix b/pkgs/development/python-modules/tensorboardx/default.nix
index 7aa29f34baa55..93d94d0c38266 100644
--- a/pkgs/development/python-modules/tensorboardx/default.nix
+++ b/pkgs/development/python-modules/tensorboardx/default.nix
@@ -19,13 +19,13 @@
 
 buildPythonPackage rec {
   pname = "tensorboardx";
-  version = "2.4";
+  version = "2.5";
 
   src = fetchFromGitHub {
     owner = "lanpa";
     repo = "tensorboardX";
-    rev = "v${version}";
-    sha256 = "sha256-1jWpC64Ubl07Bday4h5ue0wuDj4yPTWL2nhjtoQBnM0=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-g6x0yUpofeSNA4rKPidqOKC7/TrOICstcc98VnQcfDY=";
   };
 
   # apparently torch API changed a bit at 1.6
@@ -70,8 +70,6 @@ buildPythonPackage rec {
   disabledTestPaths = [
     # we are not interested in linting errors
     "tests/test_lint.py"
-    # missing caffe2 dependency
-    "tests/test_caffe2.py"
   ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/tensorflow-datasets/default.nix b/pkgs/development/python-modules/tensorflow-datasets/default.nix
index 38d6458d4fd9a..772e6da92edda 100644
--- a/pkgs/development/python-modules/tensorflow-datasets/default.nix
+++ b/pkgs/development/python-modules/tensorflow-datasets/default.nix
@@ -41,13 +41,13 @@
 
 buildPythonPackage rec {
   pname = "tensorflow-datasets";
-  version = "4.5.2";
+  version = "4.6.0";
 
   src = fetchFromGitHub {
     owner = "tensorflow";
     repo = "datasets";
-    rev = "v${version}";
-    sha256 = "sha256-OZpaY/6BMISq5IeDXyuyu5L/yG+DwlFliw4BsipPOLg=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-z52UZz9d1AaZklLOPbWuzByEl1hJ6ra4Hoz6eNGD+hg=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/terminado/default.nix b/pkgs/development/python-modules/terminado/default.nix
index 30673971a1641..ac5481e13a8ef 100644
--- a/pkgs/development/python-modules/terminado/default.nix
+++ b/pkgs/development/python-modules/terminado/default.nix
@@ -1,27 +1,46 @@
 { lib
 , buildPythonPackage
 , fetchPypi
+, hatchling
 , ptyprocess
 , tornado
+, pytest-timeout
+, pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "terminado";
-  version = "0.13.3";
+  version = "0.15.0";
+  format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-lNHPq2NSWZP31cm0aaUKGNDN85Q1tZeFcVU53UHjbA0=";
+    sha256 = "sha256-q07u3M/MHmE0v+6GEGr5CFLGnWAohOo6Hoym1Ehum/4=";
   };
 
-  propagatedBuildInputs = [ ptyprocess tornado ];
+  nativeBuildInputs = [
+    hatchling
+  ];
+
+  propagatedBuildInputs = [
+    ptyprocess
+    tornado
+  ];
+
+  pythonImportsCheck = [
+    "terminado"
+  ];
+
+  checkInputs = [
+    pytest-timeout
+    pytestCheckHook
+  ];
 
-  # test_max_terminals fails
-  doCheck = false;
 
   meta = with lib; {
     description = "Terminals served by Tornado websockets";
     homepage = "https://github.com/jupyter/terminado";
     license = licenses.bsd2;
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/development/python-modules/tern/default.nix b/pkgs/development/python-modules/tern/default.nix
index c0bceca72b802..635733149504b 100644
--- a/pkgs/development/python-modules/tern/default.nix
+++ b/pkgs/development/python-modules/tern/default.nix
@@ -8,6 +8,7 @@
 , stevedore
 , pbr
 , debian-inspector
+, license-expression
 , regex
 , GitPython
 , prettytable
@@ -17,11 +18,11 @@
 
 buildPythonPackage rec {
   pname = "tern";
-  version = "2.10.0";
+  version = "2.10.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-KpkEnpItHC/9IswfboFZ5nCcGaM9bWFX/i+6jxGN5hg=";
+    sha256 = "sha256-MMsq8/Obe3ogQSjiP8EebYseUJGcchMOczUrxE9jht4=";
   };
 
   preBuild = ''
@@ -36,6 +37,7 @@ buildPythonPackage rec {
     pyyaml
     docker
     dockerfile-parse
+    license-expression
     requests
     stevedore
     debian-inspector
diff --git a/pkgs/development/python-modules/testfixtures/default.nix b/pkgs/development/python-modules/testfixtures/default.nix
index 91f91a3d7b179..9f0de060d7d42 100644
--- a/pkgs/development/python-modules/testfixtures/default.nix
+++ b/pkgs/development/python-modules/testfixtures/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "testfixtures";
-  version = "6.18.5";
+  version = "7.0.0";
   format = "setuptools";
   # DO NOT CONTACT upstream.
   # https://github.com/simplistix/ is only concerned with internal CI process.
@@ -25,7 +25,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Atrog/Vn9bcP0608nu+5WRLniskL5sdES14vRr9XLIQ=";
+    hash = "sha256-jsrFowh5NFFkBZTZykLOibmHcR4eTJMShVMh7CH2zLQ=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/textx/default.nix b/pkgs/development/python-modules/textx/default.nix
index 8b56e0fe739dd..0a8ee2236519f 100644
--- a/pkgs/development/python-modules/textx/default.nix
+++ b/pkgs/development/python-modules/textx/default.nix
@@ -53,7 +53,7 @@ let
 
     postInstall = ''
       # FileNotFoundError: [Errno 2] No such file or directory: '$out/lib/python3.10/site-packages/textx/textx.tx
-      cp "$src/textx/textx.tx" "$out/lib/${python.libPrefix}/site-packages/${pname}/"
+      cp "$src/textx/textx.tx" "$out/${python.sitePackages}/${pname}/"
 
       # Install tests as the tests output.
       mkdir $testout
diff --git a/pkgs/development/python-modules/thinc/default.nix b/pkgs/development/python-modules/thinc/default.nix
index 44a8d5ff72847..79faa769ddf3b 100644
--- a/pkgs/development/python-modules/thinc/default.nix
+++ b/pkgs/development/python-modules/thinc/default.nix
@@ -30,14 +30,14 @@
 
 buildPythonPackage rec {
   pname = "thinc";
-  version = "8.0.17";
+  version = "8.1.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-BCxRiqeZo4vsIqegvyjfgM5hfrfeMrwEl5hwfAo2Fn8=";
+    sha256 = "sha256-6q6pHcVsBBUWqCnEYEI6iu9TVwAWEMjWOVvOldglSgs=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/tifffile/default.nix b/pkgs/development/python-modules/tifffile/default.nix
index f3fe08821f5b8..2452c6bb44534 100644
--- a/pkgs/development/python-modules/tifffile/default.nix
+++ b/pkgs/development/python-modules/tifffile/default.nix
@@ -43,6 +43,8 @@ buildPythonPackage rec {
     # AssertionError
     "test_write_bigtiff"
     "test_write_imagej_raw"
+    # https://github.com/cgohlke/tifffile/issues/142
+    "test_func_bitorder_decode"
   ];
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/tiledb/default.nix b/pkgs/development/python-modules/tiledb/default.nix
index eabb2aff006ae..99020f8d7ac17 100644
--- a/pkgs/development/python-modules/tiledb/default.nix
+++ b/pkgs/development/python-modules/tiledb/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "tiledb";
-  version = "0.13.0";
+  version = "0.16.3";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "TileDB-Inc";
     repo = "TileDB-Py";
-    rev = version;
-    sha256 = "sha256-ku+9kMXXrlPy4teV5KpTXAwExhIoPpAsGAHIBvsl9KI=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-Tg2MHlLwwcpXoHoflaNWXmXr6s7dg3IJou4PZBahRzc=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/timetagger/default.nix b/pkgs/development/python-modules/timetagger/default.nix
index 4ef4369669885..6ecacbca809d6 100644
--- a/pkgs/development/python-modules/timetagger/default.nix
+++ b/pkgs/development/python-modules/timetagger/default.nix
@@ -15,13 +15,13 @@
 
 buildPythonPackage rec {
   pname = "timetagger";
-  version = "22.6.4";
+  version = "22.6.6";
 
   src = fetchFromGitHub {
     owner = "almarklein";
     repo = pname;
     rev = "refs/tags/v${version}";
-    sha256 = "sha256-wLbC7NlDNgAyCnGjawfrnRPN/4DOcHVd93pIWrILs68=";
+    sha256 = "sha256-2qPtC8gsRw9ZOkl+H8euTwTrPVAB0cdfFflhbLqXz/I=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/tomlkit/default.nix b/pkgs/development/python-modules/tomlkit/default.nix
index fbe6c7be4d12c..9a9ecba7d0bf3 100644
--- a/pkgs/development/python-modules/tomlkit/default.nix
+++ b/pkgs/development/python-modules/tomlkit/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "tomlkit";
-  version = "0.10.1";
+  version = "0.11.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-PFF4lOre9T6QctND035EJ7jwtiAKcLfJoZsuvR9TuVE=";
+    sha256 = "sha256-YZAfgf9AF5URGc0NHtm3rzHIIdaEXIxHdYe73NXlhU4=";
   };
 
   propagatedBuildInputs =
diff --git a/pkgs/development/python-modules/toolz/default.nix b/pkgs/development/python-modules/toolz/default.nix
index 234cb471e46dd..6ca48fd1ffb24 100644
--- a/pkgs/development/python-modules/toolz/default.nix
+++ b/pkgs/development/python-modules/toolz/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "toolz";
-  version = "0.11.2";
+  version = "0.12.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6b312d5e15138552f1bda8a4e66c30e236c831b612b2bf0005f8a1df10a4bc33";
+    sha256 = "sha256-iMVwhhxEDuPy9gN8RlRhMij/QMk6bCXg66cNFygsYZQ=";
   };
 
   checkInputs = [ pytestCheckHook ];
diff --git a/pkgs/development/python-modules/torchinfo/default.nix b/pkgs/development/python-modules/torchinfo/default.nix
index be85d3d31770c..66bdb587bc218 100644
--- a/pkgs/development/python-modules/torchinfo/default.nix
+++ b/pkgs/development/python-modules/torchinfo/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "torchinfo";
-  version = "1.7.0";
+  version = "1.64";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "TylerYep";
     repo = pname;
     rev = "refs/tags/v${version}";
-    hash = "sha256-SfhFyv5ISbOG3srOK3m9BeSIkA7M8qJTm95GyfdqzcA=";
+    hash = "sha256-gcl8RxCD017FP4LtB60WVtOh7jg2Otv/vNd9hKneEAU=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/torchmetrics/default.nix b/pkgs/development/python-modules/torchmetrics/default.nix
index 590f9a835930d..e71e623e428b7 100644
--- a/pkgs/development/python-modules/torchmetrics/default.nix
+++ b/pkgs/development/python-modules/torchmetrics/default.nix
@@ -15,7 +15,7 @@
 
 let
   pname = "torchmetrics";
-  version = "0.8.2";
+  version = "0.9.2";
 in
 buildPythonPackage {
   inherit pname version;
@@ -24,7 +24,7 @@ buildPythonPackage {
     owner = "PyTorchLightning";
     repo = "metrics";
     rev = "refs/tags/v${version}";
-    hash = "sha256-1TO2YgZzjVmrE5jhMwo0Y+bQUQ5jJj34k+kGpdqqPVQ=";
+    hash = "sha256-zkdmWxaTPTMyLe7P/zVfgKSYDCec3uh0eqCtahByMlY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/torchvision/default.nix b/pkgs/development/python-modules/torchvision/default.nix
index 0cb280af67483..4eb0368a821e4 100644
--- a/pkgs/development/python-modules/torchvision/default.nix
+++ b/pkgs/development/python-modules/torchvision/default.nix
@@ -24,13 +24,13 @@ let
   cudaArchStr = lib.optionalString cudaSupport lib.strings.concatStringsSep ";" pytorch.cudaArchList;
 in buildPythonPackage rec {
   pname = "torchvision";
-  version = "0.11.3";
+  version = "0.13.0";
 
   src = fetchFromGitHub {
     owner = "pytorch";
     repo = "vision";
-    rev = "v${version}";
-    sha256 = "sha256-nJV0Jr6Uc+ALodAiekM6YpM6IbmIb4w+Jlc3bJRqayI=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-nIE1HvmAhRh3Hvj3qlF52sN9LGIorLiXlLtN7tzQxqU=";
   };
 
   nativeBuildInputs = [ libpng ninja which ]
diff --git a/pkgs/development/python-modules/tornado/default.nix b/pkgs/development/python-modules/tornado/default.nix
index 4519641c4820e..c9fa36ec65df0 100644
--- a/pkgs/development/python-modules/tornado/default.nix
+++ b/pkgs/development/python-modules/tornado/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "tornado";
-  version = "6.1";
+  version = "6.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "33c6e81d7bd55b468d2e793517c909b139960b6c790a60b7991b9b6b76fb9791";
+    sha256 = "sha256-m2MEGb3oTsZmv9fqCkyyqKZRwtXMzb3RlyoMhZ38PBM=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/tox/default.nix b/pkgs/development/python-modules/tox/default.nix
index 2307073c3225d..cc9a96a1cba77 100644
--- a/pkgs/development/python-modules/tox/default.nix
+++ b/pkgs/development/python-modules/tox/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "tox";
-  version = "3.24.5";
+  version = "3.25.1";
 
   buildInputs = [ setuptools-scm ];
   propagatedBuildInputs = [ packaging pluggy py six virtualenv toml filelock ];
@@ -22,7 +22,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "67e0e32c90e278251fea45b696d0fef3879089ccbe979b0c556d35d5a70e2993";
+    sha256 = "sha256-wTgyeBX1O8baT+VrrsXyXwBiKuae8/5OHjhXIOIkhvk=";
   };
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/tpm2-pytss/default.nix b/pkgs/development/python-modules/tpm2-pytss/default.nix
index e003d075a1582..e3e76da734433 100644
--- a/pkgs/development/python-modules/tpm2-pytss/default.nix
+++ b/pkgs/development/python-modules/tpm2-pytss/default.nix
@@ -17,12 +17,12 @@
 
 buildPythonPackage rec {
   pname = "tpm2-pytss";
-  version = "1.1.0";
+  version = "1.2.0";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-O0d1b99/V8b3embg8veerTrJGSVb/prlPVb7qSHErdQ=";
+    sha256 = "sha256-OgWWTjcj3Qd4dSaCwY+fuRQpLSFn4+9o11kPR9n8a54=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/traitlets/default.nix b/pkgs/development/python-modules/traitlets/default.nix
index 0b96ba37c156e..0a32f931d1323 100644
--- a/pkgs/development/python-modules/traitlets/default.nix
+++ b/pkgs/development/python-modules/traitlets/default.nix
@@ -8,18 +8,21 @@
 , decorator
 , pythonOlder
 , six
+, hatchling
 }:
 
 buildPythonPackage rec {
   pname = "traitlets";
-  version = "5.1.1";
+  version = "5.3.0";
+  format = "pyproject";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-BZ9FbFp8HIK5jC6MeZ85ybgSj20NRpQe4RjarOnrcMc=";
+    sha256 = "sha256-C7nx+fAXqo7Bh9ixsqemYmoqHYdxFrq6UqEpv6Ek+OI=";
   };
 
+  nativeBuildInputs = [ hatchling ];
   checkInputs = [ glibcLocales pytest mock ];
   propagatedBuildInputs = [ ipython_genutils decorator six ];
 
diff --git a/pkgs/development/python-modules/transformers/default.nix b/pkgs/development/python-modules/transformers/default.nix
index b23da192142e0..97132a964559e 100644
--- a/pkgs/development/python-modules/transformers/default.nix
+++ b/pkgs/development/python-modules/transformers/default.nix
@@ -24,7 +24,7 @@
 
 buildPythonPackage rec {
   pname = "transformers";
-  version = "4.19.4";
+  version = "4.20.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -33,7 +33,7 @@ buildPythonPackage rec {
     owner = "huggingface";
     repo = pname;
     rev = "refs/tags/v${version}";
-    hash = "sha256-MxP87tmRsjAOkTkJ7VmlUjG4RE3mh/wF76TZQE/UOoQ=";
+    hash = "sha256-3Kx7/3IJM428KXfOPRnPK4TYnAIXVOIMl33j8n5Cw60=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/translatepy/default.nix b/pkgs/development/python-modules/translatepy/default.nix
index 44191bcab808c..374c1d5dfaca4 100644
--- a/pkgs/development/python-modules/translatepy/default.nix
+++ b/pkgs/development/python-modules/translatepy/default.nix
@@ -4,25 +4,27 @@
 , requests
 , beautifulsoup4
 , pyuseragents
+, safeio
 , inquirer
 , pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "translatepy";
-  version = "2.2";
+  version = "2.3";
 
   src = fetchFromGitHub {
     owner = "Animenosekai";
     repo = "translate";
-    rev = "v${version}";
-    sha256 = "rnt4nmDgQXSgzwNCcsZwbQn2bv83DFhL86kebeiSosc=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-cx5OeBrB8il8KrcyOmQbQ7VCXoaA5RP++oTTxCs/PcM=";
   };
 
   propagatedBuildInputs = [
     requests
     beautifulsoup4
     pyuseragents
+    safeio
     inquirer
   ];
 
diff --git a/pkgs/development/python-modules/trezor_agent/default.nix b/pkgs/development/python-modules/trezor_agent/default.nix
index 41ae2e2761859..e5db9c72a5fe3 100644
--- a/pkgs/development/python-modules/trezor_agent/default.nix
+++ b/pkgs/development/python-modules/trezor_agent/default.nix
@@ -15,11 +15,11 @@
 
 buildPythonPackage rec {
   pname = "trezor_agent";
-  version = "0.11.0";
+  version = "0.12.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "139d917d6495bf290bcc21da457f84ccd2e74c78b4d59a649e0cdde4288cd20c";
+    sha256 = "sha256-4IylpUvXZYAXFkyFGNbN9iPTsHff3M/RL2Eq9f7wWFU=";
   };
 
   propagatedBuildInputs = [ setuptools trezor libagent ecdsa ed25519 mnemonic keepkey semver wheel pinentry ];
diff --git a/pkgs/development/python-modules/trimesh/default.nix b/pkgs/development/python-modules/trimesh/default.nix
index c11517f04d8ab..142ffa0729976 100644
--- a/pkgs/development/python-modules/trimesh/default.nix
+++ b/pkgs/development/python-modules/trimesh/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "trimesh";
-  version = "3.12.7";
+  version = "3.12.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-Sxuv0QNcRLVnnThFxvDQJ8pV2rhgdYCl7O12o/UJbUI=";
+    sha256 = "sha256-5eRIBCPZtoQqfSNzp3qgKyosmnz+ytZ7+Y3dPIINiHQ=";
   };
 
   propagatedBuildInputs = [ numpy ];
diff --git a/pkgs/development/python-modules/trio/default.nix b/pkgs/development/python-modules/trio/default.nix
index f9b325ecc2956..dde1391034546 100644
--- a/pkgs/development/python-modules/trio/default.nix
+++ b/pkgs/development/python-modules/trio/default.nix
@@ -18,12 +18,12 @@
 
 buildPythonPackage rec {
   pname = "trio";
-  version = "0.20.0";
+  version = "0.21.0";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ZwpS0xFdDoeeGsg4pOuZmvMvhYFj46cE/kg53ipnYHA=";
+    sha256 = "sha256-Uj85t7ae73NQHOv+Gq/UAKmq1bA1Q6Dt7VKVJIj/HBM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/trytond/default.nix b/pkgs/development/python-modules/trytond/default.nix
index 24d8d61b50974..df877a2e70261 100644
--- a/pkgs/development/python-modules/trytond/default.nix
+++ b/pkgs/development/python-modules/trytond/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "trytond";
-  version = "6.4.2";
+  version = "6.4.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ylRyTpTnciZiBeG/Mx9PGBXFdh4q3qENeygY3NDDPKU=";
+    sha256 = "sha256-LzpEHUL1RUPtg4mQqViGHQ1iCfIwQ7KTlEcDZQfhHzA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/ttp-templates/default.nix b/pkgs/development/python-modules/ttp-templates/default.nix
index 9c7899462cb8d..ac27cc1aef50b 100644
--- a/pkgs/development/python-modules/ttp-templates/default.nix
+++ b/pkgs/development/python-modules/ttp-templates/default.nix
@@ -2,12 +2,13 @@
 , buildPythonPackage
 , fetchFromGitHub
 , pythonOlder
+, poetry-core
 }:
 
 buildPythonPackage rec {
   pname = "ttp-templates";
-  version = "0.1.4";
-  format = "setuptools";
+  version = "0.3.1";
+  format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
@@ -15,13 +16,16 @@ buildPythonPackage rec {
     owner = "dmulyalin";
     repo = "ttp_templates";
     rev = "refs/tags/${version}";
-    hash = "sha256-yVDJAJXZU4pwvXSKRKUfSHqU23NcdgedOMmynMAD/Po=";
+    hash = "sha256-35Ej76E9qy5EY41Jt2GDCldyXq7IkdqKxVFrBOJh9nE=";
   };
 
+  nativeBuildInputs = [
+    poetry-core
+  ];
+
   postPatch = ''
     # Drop circular dependency on ttp
-    substituteInPlace setup.py \
-      --replace '"ttp>=0.6.0"' ""
+    sed -i '/ttp =/d' pyproject.toml
   '';
 
   # Circular dependency on ttp
diff --git a/pkgs/development/python-modules/ttp/default.nix b/pkgs/development/python-modules/ttp/default.nix
index a484ed9f76ac4..afa66b288ab20 100644
--- a/pkgs/development/python-modules/ttp/default.nix
+++ b/pkgs/development/python-modules/ttp/default.nix
@@ -9,6 +9,7 @@
 , netmiko
 , openpyxl
 , pytestCheckHook
+, poetry-core
 , pyyaml
 , tabulate
 , ttp-templates
@@ -17,16 +18,20 @@
 
 buildPythonPackage rec {
   pname = "ttp";
-  version = "0.8.4";
-  format = "setuptools";
+  version = "0.9.1";
+  format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "dmulyalin";
     repo = pname;
-    rev = version;
-    hash = "sha256-vuKlddqm8KirqAJyvBPfRb5Nw9zo4Fl1bwbfVMhmH9g=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-FhuIYXktcNnOVX+KU5cDOd2Qk7AcWaSKvfB/BZYpsZo=";
   };
 
+  nativeBuildInputs = [
+    poetry-core
+  ];
+
   propagatedBuildInputs = [
     # https://github.com/dmulyalin/ttp/blob/master/docs/source/Installation.rst#additional-dependencies
     cerberus
@@ -87,6 +92,8 @@ buildPythonPackage rec {
     "test_child_group_do_not_start_if_no_parent_started"
     # Assertion Error
     "test_in_threads_parsing"
+    # missing env var
+    "test_ttp_templates_dir_env_variable"
   ];
 
   pytestFlagsArray = [
diff --git a/pkgs/development/python-modules/tubes/default.nix b/pkgs/development/python-modules/tubes/default.nix
index 0dbfe22065703..a605952b2b7dd 100644
--- a/pkgs/development/python-modules/tubes/default.nix
+++ b/pkgs/development/python-modules/tubes/default.nix
@@ -4,12 +4,12 @@
 
 buildPythonPackage rec {
   pname = "tubes";
-  version = "0.2.0";
+  version = "0.2.1";
 
   src = fetchPypi {
     pname = "Tubes";
     inherit version;
-    sha256 = "0sg1gg2002h1xsgxigznr1zk1skwmhss72dzk6iysb9k9kdgymcd";
+    sha256 = "sha256-WbkZfy+m9/xrwygd5VeXrccpu3XJxhO09tbEFZnw14s=";
   };
 
   propagatedBuildInputs = [ characteristic six twisted ];
diff --git a/pkgs/development/python-modules/typed-settings/default.nix b/pkgs/development/python-modules/typed-settings/default.nix
index d9696122f151a..3a6ee309ff551 100644
--- a/pkgs/development/python-modules/typed-settings/default.nix
+++ b/pkgs/development/python-modules/typed-settings/default.nix
@@ -12,13 +12,13 @@
 
 buildPythonPackage rec {
   pname = "typed-settings";
-  version = "1.0.1";
+  version = "1.1.0";
   format = "pyproject";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-xrIJgQiAaSXcANMnyXMnqEkLNUP+VyxjRoi9DkX+SLA=";
+    sha256 = "sha256-Ja2ZLqzJSSvK5hIMhayMztJta/Jc3tmb2tzdlxageAs=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/typer/default.nix b/pkgs/development/python-modules/typer/default.nix
index 29f104e6400e2..460b9bdda0631 100644
--- a/pkgs/development/python-modules/typer/default.nix
+++ b/pkgs/development/python-modules/typer/default.nix
@@ -6,6 +6,7 @@
 , flit-core
 , click
 , pytestCheckHook
+, rich
 , shellingham
 , pytest-xdist
 , pytest-sugar
@@ -15,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "typer";
-  version = "0.4.2";
+  version = "0.6.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-uCYcbAFS3XNHi1upa6Z35daUjHFcMQ98kQefMR9i7AM=";
+    sha256 = "sha256-LVcgpeY/c+rzHtqhX2q4fzXwaQ+MojMBfX0j10OpHXM=";
   };
 
   nativeBuildInputs = [
@@ -38,6 +39,7 @@ buildPythonPackage rec {
     pytest-xdist
     pytest-sugar
     shellingham
+    rich
     coverage # execs coverage in tests
   ];
 
diff --git a/pkgs/development/python-modules/types-dateutil/default.nix b/pkgs/development/python-modules/types-dateutil/default.nix
index c51b183552d97..f5d628b4b97bd 100644
--- a/pkgs/development/python-modules/types-dateutil/default.nix
+++ b/pkgs/development/python-modules/types-dateutil/default.nix
@@ -5,13 +5,13 @@
 
 buildPythonPackage rec {
   pname = "types-dateutil";
-  version = "2.8.16";
+  version = "2.8.18";
   format = "setuptools";
 
   src = fetchPypi {
     pname = "types-python-dateutil";
     inherit version;
-    hash = "sha256-OqrEwTjra47LwlUJluwl1uRbXTKIfR5pPQhC7i+mWdI=";
+    hash = "sha256-hpXH16WxrvQALzq04SR+I7HUHNfMEobUWUwtjFWTyZE=";
   };
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/types-protobuf/default.nix b/pkgs/development/python-modules/types-protobuf/default.nix
index 5393a1604c9c3..e3b8069f53d6b 100644
--- a/pkgs/development/python-modules/types-protobuf/default.nix
+++ b/pkgs/development/python-modules/types-protobuf/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "types-protobuf";
-  version = "3.19.15";
+  version = "3.19.22";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-03HQpbMueMLWhDKaXUSR04Xm6tyrSXs3xBFy3tMoxdk=";
+    sha256 = "sha256-0rJoYbDLRqPIZpsN9Qe373Lkh9pm1h+fNXaqds4CioM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/types-pyyaml/default.nix b/pkgs/development/python-modules/types-pyyaml/default.nix
index e2c74aa1a466f..86ae1bb8f4cc2 100644
--- a/pkgs/development/python-modules/types-pyyaml/default.nix
+++ b/pkgs/development/python-modules/types-pyyaml/default.nix
@@ -5,13 +5,13 @@
 
 buildPythonPackage rec {
   pname = "types-pyyaml";
-  version = "6.0.9";
+  version = "6.0.10";
   format = "setuptools";
 
   src = fetchPypi {
     pname = "types-PyYAML";
     inherit version;
-    sha256 = "sha256-M651yEuPYf3fDGPpx+VX252xaUrTwu6GKOxe/rtaXps=";
+    sha256 = "sha256-oWdsrrCYCWgz/i8Ucufqjev3ZjIilk+pBUXPqv6/M4U=";
   };
 
   # Module doesn't have tests
diff --git a/pkgs/development/python-modules/types-redis/default.nix b/pkgs/development/python-modules/types-redis/default.nix
index f1ce15b68227d..38505520455cd 100644
--- a/pkgs/development/python-modules/types-redis/default.nix
+++ b/pkgs/development/python-modules/types-redis/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "types-redis";
-  version = "4.3.3";
+  version = "4.3.4";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-064pr/eZk2HJ+XlJi9LiV/ky9ikbh2qsC0S18AEGxuE=";
+    sha256 = "sha256-0LkUPeiuDW42mfJG9Us7IgS+WTYy/A1JyilAhnw+JZE=";
   };
 
   # Module doesn't have tests
diff --git a/pkgs/development/python-modules/typing-extensions/default.nix b/pkgs/development/python-modules/typing-extensions/default.nix
index 97f0d48cecc2a..36464204e75d6 100644
--- a/pkgs/development/python-modules/typing-extensions/default.nix
+++ b/pkgs/development/python-modules/typing-extensions/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "typing-extensions";
-  version = "4.1.1";
+  version = "4.3.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
@@ -16,18 +16,13 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "typing_extensions";
     inherit version;
-    hash = "sha256-GpRi3MM0enmx8cAnH7556ERYC7WYuvoe0gi5TaPNzUI=";
+    hash = "sha256-5tJnejL0f8frJ5XbHdFcHzTv9ha8ryz7Xpl/hU+hxKY=";
   };
 
   nativeBuildInputs = [
     flit-core
   ];
 
-  postPatch = ''
-    # Remove metadata for README which are outdated
-    sed -i -e '11,24d' pyproject.toml
-  '';
-
   # Tests are not part of PyPI releases. GitHub source can't be used
   # as it ends with an infinite recursion
   doCheck = false;
diff --git a/pkgs/development/python-modules/ufo2ft/default.nix b/pkgs/development/python-modules/ufo2ft/default.nix
index b1e5ea7905a01..5a87bfd42c2b6 100644
--- a/pkgs/development/python-modules/ufo2ft/default.nix
+++ b/pkgs/development/python-modules/ufo2ft/default.nix
@@ -7,18 +7,19 @@
 , compreffor
 , booleanoperations
 , cffsubr
+, ufoLib2
 , pytestCheckHook
 }:
 
 buildPythonPackage rec {
   pname = "ufo2ft";
-  version = "2.27.0";
+  version = "2.28.0";
 
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "r5bE4M/blt5TKzP43MpijwYY6ll3aasszmGksY5WTTE=";
+    sha256 = "sha256-pWHvjAvHNWlmJiQ75JRmFyrjYnzbJG7M8/DGoIWpEBk=";
   };
 
   patches = [
@@ -37,6 +38,7 @@ buildPythonPackage rec {
     compreffor
     booleanoperations
     cffsubr
+    ufoLib2
   ];
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/ufo2ft/fonttools-cu2qu.patch b/pkgs/development/python-modules/ufo2ft/fonttools-cu2qu.patch
index 892cd4abeb308..56aba78b5b31a 100644
--- a/pkgs/development/python-modules/ufo2ft/fonttools-cu2qu.patch
+++ b/pkgs/development/python-modules/ufo2ft/fonttools-cu2qu.patch
@@ -1,4 +1,4 @@
-From 0b3631e91c93d56460929f40850f7d8a39a71bde Mon Sep 17 00:00:00 2001
+From eb63747509b2c18793b95eb12cc0141277520798 Mon Sep 17 00:00:00 2001
 From: Simon Cozens <simon@simon-cozens.org>
 Date: Thu, 11 Feb 2021 09:43:41 +0000
 Subject: [PATCH 1/2] Rename cu2qu to fontTools.cu2qu
@@ -6,14 +6,13 @@ Subject: [PATCH 1/2] Rename cu2qu to fontTools.cu2qu
 ---
  Lib/ufo2ft/filters/cubicToQuadratic.py | 4 ++--
  Lib/ufo2ft/preProcessor.py             | 4 ++--
- requirements.txt                       | 1 -
  setup.py                               | 1 -
  tests/outlineCompiler_test.py          | 2 +-
  tests/preProcessor_test.py             | 2 +-
- 6 files changed, 6 insertions(+), 8 deletions(-)
+ 5 files changed, 6 insertions(+), 7 deletions(-)
 
 diff --git a/Lib/ufo2ft/filters/cubicToQuadratic.py b/Lib/ufo2ft/filters/cubicToQuadratic.py
-index 87d81b1f..4b77144f 100644
+index 87d81b1..4b77144 100644
 --- a/Lib/ufo2ft/filters/cubicToQuadratic.py
 +++ b/Lib/ufo2ft/filters/cubicToQuadratic.py
 @@ -1,7 +1,7 @@
@@ -27,44 +26,44 @@ index 87d81b1f..4b77144f 100644
  from ufo2ft.filters import BaseFilter
  from ufo2ft.fontInfoData import getAttrWithFallback
 diff --git a/Lib/ufo2ft/preProcessor.py b/Lib/ufo2ft/preProcessor.py
-index 05ac47dc..c796df2e 100644
+index e239152..9463aea 100644
 --- a/Lib/ufo2ft/preProcessor.py
 +++ b/Lib/ufo2ft/preProcessor.py
-@@ -217,7 +217,7 @@ def __init__(
-         layerNames=None,
+@@ -267,7 +267,7 @@ class TTFInterpolatablePreProcessor:
          skipExportGlyphs=None,
+         filters=None,
      ):
 -        from cu2qu.ufo import DEFAULT_MAX_ERR
 +        from fontTools.cu2qu.ufo import DEFAULT_MAX_ERR
  
          self.ufos = ufos
          self.inplace = inplace
-@@ -249,7 +249,7 @@ def __init__(
-             self.postFilters.append(post)
+@@ -304,7 +304,7 @@ class TTFInterpolatablePreProcessor:
+         self.postFilters = [[f for f in filters if not f.pre] for filters in filterses]
  
      def process(self):
 -        from cu2qu.ufo import fonts_to_quadratic
 +        from fontTools.cu2qu.ufo import fonts_to_quadratic
  
-         # first apply all custom pre-filters
-         for funcs, ufo, glyphSet in zip(self.preFilters, self.ufos, self.glyphSets):
+         needs_decomposition = set()
+ 
 diff --git a/setup.py b/setup.py
-index 175429af..eef39ee1 100644
+index d8d9982..a165ab1 100644
 --- a/setup.py
 +++ b/setup.py
-@@ -30,7 +30,6 @@
+@@ -30,7 +30,6 @@ setup(
      tests_require=["pytest>=2.8"],
      install_requires=[
-         "fonttools[ufo]>=4.28.5",
+         "fonttools[ufo]>=4.34.0",
 -        "cu2qu>=1.6.7",
          "cffsubr>=0.2.8",
          "booleanOperations>=0.9.0",
      ],
 diff --git a/tests/outlineCompiler_test.py b/tests/outlineCompiler_test.py
-index 74319184..e7b15a23 100644
+index b31319c..ee51920 100644
 --- a/tests/outlineCompiler_test.py
 +++ b/tests/outlineCompiler_test.py
-@@ -2,7 +2,7 @@
+@@ -2,7 +2,7 @@ import logging
  import os
  
  import pytest
@@ -74,10 +73,10 @@ index 74319184..e7b15a23 100644
  from fontTools.ttLib.tables._g_l_y_f import USE_MY_METRICS
  
 diff --git a/tests/preProcessor_test.py b/tests/preProcessor_test.py
-index 64196f92..87b23946 100644
+index 11196f8..bc32d55 100644
 --- a/tests/preProcessor_test.py
 +++ b/tests/preProcessor_test.py
-@@ -2,7 +2,7 @@
+@@ -2,7 +2,7 @@ import logging
  import os
  
  import pytest
@@ -86,8 +85,10 @@ index 64196f92..87b23946 100644
  from fontTools import designspaceLib
  
  import ufo2ft
+-- 
+2.36.1
 
-From 27c5af88ec2c3314618ecbf65104050a53508bb0 Mon Sep 17 00:00:00 2001
+From 58f3ab5e5db8090aba10fefd58ad8df4b507e7c3 Mon Sep 17 00:00:00 2001
 From: Simon Cozens <simon@simon-cozens.org>
 Date: Thu, 11 Feb 2021 09:49:28 +0000
 Subject: [PATCH 2/2] Sort the imports
@@ -98,7 +99,7 @@ Subject: [PATCH 2/2] Sort the imports
  2 files changed, 2 insertions(+), 2 deletions(-)
 
 diff --git a/Lib/ufo2ft/filters/cubicToQuadratic.py b/Lib/ufo2ft/filters/cubicToQuadratic.py
-index 4b77144f..5f28ea42 100644
+index 4b77144..5f28ea4 100644
 --- a/Lib/ufo2ft/filters/cubicToQuadratic.py
 +++ b/Lib/ufo2ft/filters/cubicToQuadratic.py
 @@ -1,7 +1,7 @@
@@ -111,10 +112,10 @@ index 4b77144f..5f28ea42 100644
  from ufo2ft.filters import BaseFilter
  from ufo2ft.fontInfoData import getAttrWithFallback
 diff --git a/tests/preProcessor_test.py b/tests/preProcessor_test.py
-index 87b23946..76ee495a 100644
+index bc32d55..41c579c 100644
 --- a/tests/preProcessor_test.py
 +++ b/tests/preProcessor_test.py
-@@ -2,8 +2,8 @@
+@@ -2,8 +2,8 @@ import logging
  import os
  
  import pytest
@@ -124,3 +125,6 @@ index 87b23946..76ee495a 100644
  
  import ufo2ft
  from ufo2ft.constants import (
+-- 
+2.36.1
+
diff --git a/pkgs/development/python-modules/ujson/default.nix b/pkgs/development/python-modules/ujson/default.nix
index 1baa1c86f6248..ee2fede8e9f8f 100644
--- a/pkgs/development/python-modules/ujson/default.nix
+++ b/pkgs/development/python-modules/ujson/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "ujson";
-  version = "5.3.0";
+  version = "5.4.0";
   disabled = isPyPy || pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-q5OHd7OsA3IjHuZUp/ahN4flh7HKJo2Kp+b7aEbkd9A=";
+    sha256 = "sha256-a5U+CUQeMHUEEwdV5b1rFYUBeNWR9mKSu6RgjE9/mwA=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/uncertainties/default.nix b/pkgs/development/python-modules/uncertainties/default.nix
index 180baf0d4dded..06bdf12349dc8 100644
--- a/pkgs/development/python-modules/uncertainties/default.nix
+++ b/pkgs/development/python-modules/uncertainties/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "uncertainties";
-  version = "3.1.6";
+  version = "3.1.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0b9y0v73ih142bygi66dxqx17j2x4dfvl7xnhmafj9yjmymbakbw";
+    sha256 = "sha256-gBEeCDnyOcWyM8tHcgF7SDoLehVzpYG5Krd0ajXm+qs=";
   };
 
   propagatedBuildInputs = [ future ];
diff --git a/pkgs/development/python-modules/unifi-discovery/default.nix b/pkgs/development/python-modules/unifi-discovery/default.nix
index 5b1e864598671..68d28d0f47568 100644
--- a/pkgs/development/python-modules/unifi-discovery/default.nix
+++ b/pkgs/development/python-modules/unifi-discovery/default.nix
@@ -39,6 +39,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   postPatch = ''
     substituteInPlace pyproject.toml \
       --replace "--cov=unifi_discovery --cov-report=term-missing:skip-covered" ""
diff --git a/pkgs/development/python-modules/untangle/default.nix b/pkgs/development/python-modules/untangle/default.nix
index 820c96c38c90e..6582f5080bd05 100644
--- a/pkgs/development/python-modules/untangle/default.nix
+++ b/pkgs/development/python-modules/untangle/default.nix
@@ -1,17 +1,21 @@
-{ lib, buildPythonPackage, fetchFromGitHub, python }:
+{ lib, buildPythonPackage, fetchFromGitHub, python, defusedxml }:
 
 buildPythonPackage rec {
   pname = "untangle";
-  version = "1.1.1";
+  version = "1.2.1";
 
   src = fetchFromGitHub {
     owner = "stchris";
     repo = "untangle";
     # 1.1.1 is not tagged on GitHub
-    rev = "61b57cd771a40df7d1621e9ec3c68d9acd733d31";
-    sha256 = "0ffvlfyyl82xi4akz1lls32lrnlrn44ik41v8x8xh9ghy0n0ick7";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-cJkN8vT5hW5hRuLxr/6udwMO4GVH1pJhAc6qmPO2EEI=";
   };
 
+  propagatedBuildInputs = [
+    defusedxml
+  ];
+
   checkPhase = ''
     ${python.interpreter} -m unittest discover -s tests
   '';
diff --git a/pkgs/development/python-modules/uproot/default.nix b/pkgs/development/python-modules/uproot/default.nix
index 8bf8e67b8e465..580f585e225b2 100644
--- a/pkgs/development/python-modules/uproot/default.nix
+++ b/pkgs/development/python-modules/uproot/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "uproot";
-  version = "4.2.0";
+  version = "4.3.3";
 
   # fetch from github for tests
   src = fetchFromGitHub {
     owner = "scikit-hep";
     repo = "uproot4";
-    rev = version;
-    sha256 = "sha256-ft2VXYGb+iPqRUrtOBvl7SgTPfPR4+IOdYFVTNbQAEw=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-7wc5KmnjCA90zOaq3qi5V1vvXi4tPwor8tK20i9WrTY=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/urllib3/default.nix b/pkgs/development/python-modules/urllib3/default.nix
index 790b497bb8f03..ba10224e92cec 100644
--- a/pkgs/development/python-modules/urllib3/default.nix
+++ b/pkgs/development/python-modules/urllib3/default.nix
@@ -20,12 +20,12 @@
 
 buildPythonPackage rec {
   pname = "urllib3";
-  version = "1.26.9";
+  version = "1.26.10";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-qrrxZHeAal4d0ZqkH4wreVDdPHRjYtfjIj2+beasRI4=";
+    hash = "sha256-h5uk0eiWVNl2nOExIeD5QxDqMujS+M9Ye3fAi7zbMNY=";
   };
 
   # FIXME: remove backwards compatbility hack
diff --git a/pkgs/development/python-modules/uvicorn/default.nix b/pkgs/development/python-modules/uvicorn/default.nix
index cc9f884f7cb96..e8b2520393ca6 100644
--- a/pkgs/development/python-modules/uvicorn/default.nix
+++ b/pkgs/development/python-modules/uvicorn/default.nix
@@ -2,7 +2,6 @@
 , buildPythonPackage
 , callPackage
 , fetchFromGitHub
-, asgiref
 , click
 , h11
 , httptools
@@ -18,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "uvicorn";
-  version = "0.17.6";
+  version = "0.18.2";
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "encode";
     repo = pname;
     rev = version;
-    hash = "sha256-iJlAU7zZl9X3FcQlJoJ7KlETZOx6WsE9FcpCK4Cm/Fo=";
+    hash = "sha256-nxtDqYh2OmDtoV10CEBGYQrQBf+Xtuf5k9yR6UfCgYc=";
   };
 
   outputs = [
@@ -34,7 +33,6 @@ buildPythonPackage rec {
   ];
 
   propagatedBuildInputs = [
-    asgiref
     click
     h11
     httptools
diff --git a/pkgs/development/python-modules/validators/default.nix b/pkgs/development/python-modules/validators/default.nix
index f83fe801a2a2f..8cb42064ba21e 100644
--- a/pkgs/development/python-modules/validators/default.nix
+++ b/pkgs/development/python-modules/validators/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "validators";
-  version = "0.18.2";
+  version = "0.20.0";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "37cd9a9213278538ad09b5b9f9134266e7c226ab1fede1d500e29e0a8fbb9ea6";
+    sha256 = "sha256-JBSM5OZBAKLV4mcjPiPnr+tVMWtH0w+q5+tucpK8Imo=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/vcrpy/default.nix b/pkgs/development/python-modules/vcrpy/default.nix
index 7766e75ba05ee..8dbc7b50546ee 100644
--- a/pkgs/development/python-modules/vcrpy/default.nix
+++ b/pkgs/development/python-modules/vcrpy/default.nix
@@ -16,13 +16,13 @@
 
 buildPythonPackage rec {
   pname = "vcrpy";
-  version = "4.1.1";
+  version = "4.2.0";
 
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "57095bf22fc0a2d99ee9674cdafebed0f3ba763018582450706f7d3a74fff599";
+    sha256 = "sha256-lFILhvt2WSWtyMd/+TToml4VbCjnSjFDICF+8bRUr+A=";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/virtualenv/default.nix b/pkgs/development/python-modules/virtualenv/default.nix
index a739ab2fd6ce8..3fba7cdb50c52 100644
--- a/pkgs/development/python-modules/virtualenv/default.nix
+++ b/pkgs/development/python-modules/virtualenv/default.nix
@@ -23,11 +23,11 @@
 
 buildPythonPackage rec {
   pname = "virtualenv";
-  version = "20.14.0";
+  version = "20.15.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-jltAIDcocSboHM3pQyuVqL5bGdNlhPZJVwYKNIjBHKg=";
+    sha256 = "sha256-KIFxE0ov87+xovVPEZ53zRuBwp/BJlojVvPo0Ux9WMQ=";
   };
 
   nativeBuildInputs = [
@@ -72,6 +72,9 @@ buildPythonPackage rec {
   ];
 
   disabledTests = [
+    # Network access
+    "test_create_no_seed"
+    "test_seed_link_via_app_data"
     # Permission Error
     "test_bad_exe_py_info_no_raise"
   ] ++ lib.optionals isPy27 [
diff --git a/pkgs/development/python-modules/vivisect/default.nix b/pkgs/development/python-modules/vivisect/default.nix
index 68375a8eadc34..df0c72a34494e 100644
--- a/pkgs/development/python-modules/vivisect/default.nix
+++ b/pkgs/development/python-modules/vivisect/default.nix
@@ -21,11 +21,11 @@
 
 buildPythonPackage rec {
   pname = "vivisect";
-  version = "1.0.7";
+  version = "1.0.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "727a27ac1eb95d5a41f4430f6912e79940525551314fe68a2811fc9d51eaf2e9";
+    sha256 = "sha256-Y8y6sAQJa9baPPdhtuR9Jv1tJkNWJsS1hJ1lknkHWU4=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/vulture/default.nix b/pkgs/development/python-modules/vulture/default.nix
index e1dd04ed75f6d..0062bbd9e4152 100644
--- a/pkgs/development/python-modules/vulture/default.nix
+++ b/pkgs/development/python-modules/vulture/default.nix
@@ -1,6 +1,7 @@
 { lib
 , buildPythonPackage
 , fetchPypi
+, pint
 , pythonOlder
 , pytestCheckHook
 , toml
@@ -8,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "vulture";
-  version = "2.4";
+  version = "2.5";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-gZQ5KUp2tOC44Ixw11VlqM49wfbgNVjtEjpfK7c3wOo=";
+    hash = "sha256-KDFpQFXrLjagnDt2gJNINxArm2wJaSBuOQLVE2Ehd8M=";
   };
 
   postPatch = ''
@@ -28,6 +29,7 @@ buildPythonPackage rec {
   ];
 
   checkInputs = [
+    pint
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/wandb/default.nix b/pkgs/development/python-modules/wandb/default.nix
index 5bfade16e5c56..586463dbaa889 100644
--- a/pkgs/development/python-modules/wandb/default.nix
+++ b/pkgs/development/python-modules/wandb/default.nix
@@ -39,7 +39,7 @@
 
 buildPythonPackage rec {
   pname = "wandb";
-  version = "0.12.20";
+  version = "0.12.21";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -48,7 +48,7 @@ buildPythonPackage rec {
     owner = pname;
     repo = "client";
     rev = "refs/tags/v${version}";
-    hash = "sha256-zS3DA06uLfUApe0kDAbqPA+2is70bnb9EifgFWqcuRg=";
+    hash = "sha256-jKb2pNmCW4MYz6ncsMNg7o5giCI2bpKER/kb8lfJekI=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/warlock/default.nix b/pkgs/development/python-modules/warlock/default.nix
index c20723e8d6e25..c646107c32f7d 100644
--- a/pkgs/development/python-modules/warlock/default.nix
+++ b/pkgs/development/python-modules/warlock/default.nix
@@ -2,6 +2,7 @@
 , buildPythonPackage
 , fetchFromGitHub
 , pythonOlder
+, poetry-core
 , jsonpatch
 , jsonschema
 , six
@@ -10,28 +11,29 @@
 
 buildPythonPackage rec {
   pname = "warlock";
-  version = "1.3.3";
-  format = "setuptools";
+  version = "2.0.1";
+  format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "bcwaldon";
     repo = pname;
-    rev = version;
-    hash = "sha256-59V4KOwjs/vhA3F3E0j3p5L4JnKPgcExN+mgSWs0Cn0=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-HOCLzFYmOL/tCXT+NO/tCZuVXVowNEPP3g33ZYg4+6Q=";
   };
 
   postPatch = ''
-    substituteInPlace requirements.txt \
-      --replace "jsonschema>=0.7,<4" "jsonschema"
-    sed -i "/--cov/d" pytest.ini
+    sed -i '/--cov/d' pytest.ini
   '';
 
+  nativeBuildInputs = [
+    poetry-core
+  ];
+
   propagatedBuildInputs = [
     jsonpatch
     jsonschema
-    six
   ];
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/watchdog/default.nix b/pkgs/development/python-modules/watchdog/default.nix
index 177848497b81b..c530ea66cde69 100644
--- a/pkgs/development/python-modules/watchdog/default.nix
+++ b/pkgs/development/python-modules/watchdog/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "watchdog";
-  version = "2.1.8";
+  version = "2.1.9";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-bQMUkSaGSr0ycV1OkmfSdUzt4lppBSkBOZNWrTvF7P8=";
+    sha256 = "sha256-Q84g67NqUfIfo3b3bR1GkkUrJSfM1gGVDWntNrniFgk=";
   };
 
   patches = lib.optionals (stdenv.isDarwin && !stdenv.isAarch64) [
diff --git a/pkgs/development/python-modules/watchfiles/default.nix b/pkgs/development/python-modules/watchfiles/default.nix
index 49cbef94b88bc..f85bc75c800e9 100644
--- a/pkgs/development/python-modules/watchfiles/default.nix
+++ b/pkgs/development/python-modules/watchfiles/default.nix
@@ -15,28 +15,28 @@
 
 buildPythonPackage rec {
   pname = "watchfiles";
-  version = "0.14.1";
-  format = "setuptools";
+  version = "0.15.0";
+  format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "samuelcolvin";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-XjmmyL7ZRqkYwGGk6/KkxL7e/JA43tQN4W3knTtc7t0=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-DibxoVH7uOy9rxzhiN4HmihA7HtdzErmJOnsI/NWY5I=";
   };
 
   cargoDeps = rustPlatform.fetchCargoTarball {
     inherit src;
     name = "${pname}-${version}";
-    sha256 = "sha256-sZMj1HQ37gAG3WM+qBMhcCQ2MuUGom23lF8c4L0RQzM=";
+    hash = "sha256-EakC/rSIS42Q4Y0pvWKG7mzppU5KjCktnC09iFMZM0A=";
   };
 
   nativeBuildInputs = [
-    setuptools-rust
   ] ++ (with rustPlatform; [
     cargoSetupHook
+    maturinBuildHook
     rust.cargo
     rust.rustc
   ]);
@@ -45,6 +45,10 @@ buildPythonPackage rec {
     anyio
   ];
 
+  preCheck = ''
+    rm -rf watchfiles
+  '';
+
   checkInputs = [
     dirty-equals
     pytest-mock
@@ -56,10 +60,6 @@ buildPythonPackage rec {
     "watchfiles"
   ];
 
-  preCheck = ''
-    cd tests
-  '';
-
   meta = with lib; {
     broken = stdenv.isDarwin;
     description = "Simple, modern file watching and code reload";
diff --git a/pkgs/development/python-modules/watchgod/default.nix b/pkgs/development/python-modules/watchgod/default.nix
index 70e93f1a20906..80d95b3175f67 100644
--- a/pkgs/development/python-modules/watchgod/default.nix
+++ b/pkgs/development/python-modules/watchgod/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "watchgod";
-  version = "0.8.1";
+  version = "0.8.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-wS0V8999EedAcE5FOYJ3918dePRq1Zyp11Bb/YuNMIY=";
+    sha256 = "sha256-yxH/ZmV777qU2CjjtiLV+3byL72hN281Xz5uUel9lFA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/wavedrom/default.nix b/pkgs/development/python-modules/wavedrom/default.nix
index d8db35fbdaebc..cce9a162e865d 100644
--- a/pkgs/development/python-modules/wavedrom/default.nix
+++ b/pkgs/development/python-modules/wavedrom/default.nix
@@ -5,6 +5,7 @@
 , fetchPypi
 , pillow
 , pytestCheckHook
+, pyyaml
 , setuptools-scm
 , six
 , svgwrite
@@ -13,12 +14,12 @@
 
 buildPythonPackage rec {
   pname = "wavedrom";
-  version = "2.0.3.post2";
+  version = "2.0.3.post3";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-I5s0Nf8RawkAfVUX7tdV/IWRiRtycaHNQNueQAwCRI0=";
+    hash = "sha256-MntNXcpZPIElfCAv6lFvepCHR/sRUnw1nwNPW3r39Hs=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;
@@ -29,6 +30,7 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [
     attrdict
+    pyyaml
     svgwrite
     six
   ];
diff --git a/pkgs/development/python-modules/websocket-client/default.nix b/pkgs/development/python-modules/websocket-client/default.nix
index a1c0cfa82e1d0..a73703f12a113 100644
--- a/pkgs/development/python-modules/websocket-client/default.nix
+++ b/pkgs/development/python-modules/websocket-client/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "websocket-client";
-  version = "1.3.2";
+  version = "1.3.3";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ULIdsAWPepU9Z8wERb5LlI1/wZbsvrgIPWjZRijkq/Y=";
+    sha256 = "sha256-1YxfKE1qm/g3natCMln+j4W3DV+l0pFtV5GoRZSxIrE=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/whisper/default.nix b/pkgs/development/python-modules/whisper/default.nix
index 28a2c15a8dbd1..b36a5c9a23c82 100644
--- a/pkgs/development/python-modules/whisper/default.nix
+++ b/pkgs/development/python-modules/whisper/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "whisper";
-  version = "1.1.8";
+  version = "1.1.10";
 
   src = fetchFromGitHub {
     owner = "graphite-project";
     repo = pname;
-    rev = version;
-    sha256 = "11f7sarj62zgpw3ak4a2q55lj7ap4039l9ybc3a6yvs1ppvrcn7x";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-CnCbRmI2jc67mTtfupoE1uHtobrAiWoUXbfX8YeEV6A=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/widgetsnbextension/default.nix b/pkgs/development/python-modules/widgetsnbextension/default.nix
index 563e792850d50..7609eb376f1c5 100644
--- a/pkgs/development/python-modules/widgetsnbextension/default.nix
+++ b/pkgs/development/python-modules/widgetsnbextension/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "widgetsnbextension";
-  version = "3.6.0";
+  version = "3.6.1";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-6Ep6n8ubrz1XEG4YSnOJqPjrk1v3QaXrnWCqGMwCmoA=";
+    hash = "sha256-nISuZMKJPHy+Lqr8dQUiGnlcJ9aJOEVANKxIcxmnWxA=";
   };
 
   # setup.py claims to require notebook, but the source doesn't have any imports
diff --git a/pkgs/development/python-modules/wled/default.nix b/pkgs/development/python-modules/wled/default.nix
index 362d4e4d2b29a..9d42c48a606f2 100644
--- a/pkgs/development/python-modules/wled/default.nix
+++ b/pkgs/development/python-modules/wled/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "wled";
-  version = "0.13.2";
+  version = "0.14.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.8";
@@ -23,8 +23,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "frenck";
     repo = "python-wled";
-    rev = "v${version}";
-    sha256 = "sha256-Rv0jaKkN6jQ7oiv1cBYx4HAr7IqPm57jZFykXayp0T0=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-ytjCjxnJOMmFlGS+AuEAbIZcV2yoTgaXSLdqxPg6Hew=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/wrf-python/default.nix b/pkgs/development/python-modules/wrf-python/default.nix
index e839aa805ffed..2714169aaddd3 100644
--- a/pkgs/development/python-modules/wrf-python/default.nix
+++ b/pkgs/development/python-modules/wrf-python/default.nix
@@ -3,17 +3,19 @@
 , fetchFromGitHub
 , pythonOlder
 , buildPythonPackage
+, basemap
 , gfortran
-, xarray
-, wrapt
-, numpy
 , netcdf4
+, numpy
+, python
 , setuptools
+, xarray
+, wrapt
 }:
 
 buildPythonPackage rec {
   pname = "wrf-python";
-  version = "1.3.3";
+  version = "1.3.4.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -21,19 +23,20 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "NCAR";
     repo = "wrf-python";
-    rev = version;
-    hash = "sha256-+v4FEK0FVE0oAIb18XDTOInHKfxXyykb1ngk9Uxwf0c=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-4iIs/M9fzGJsnKCDSl09OTUoh7j6REBXuutE5uXFe3k=";
   };
 
+  nativeBuildInputs = [
+    gfortran
+  ];
+
   propagatedBuildInputs = [
-    wrapt
+    basemap
     numpy
     setuptools
     xarray
-  ];
-
-  nativeBuildInputs = [
-    gfortran
+    wrapt
   ];
 
   checkInputs = [
@@ -43,7 +46,7 @@ buildPythonPackage rec {
   checkPhase = ''
     runHook preCheck
     cd ./test/ci_tests
-    python utests.py
+    ${python.interpreter} utests.py
     runHook postCheck
   '';
 
@@ -52,10 +55,10 @@ buildPythonPackage rec {
   ];
 
   meta = with lib; {
-    broken = (stdenv.isLinux && stdenv.isAarch64) || stdenv.isDarwin;
     description = "WRF postprocessing library for Python";
     homepage = "http://wrf-python.rtfd.org";
     license = licenses.asl20;
     maintainers = with maintainers; [ mhaselsteiner ];
+    broken = (stdenv.isLinux && stdenv.isAarch64) || stdenv.isDarwin;
   };
 }
diff --git a/pkgs/development/python-modules/xarray-einstats/default.nix b/pkgs/development/python-modules/xarray-einstats/default.nix
index 921bedaae8bca..244541f7d852c 100644
--- a/pkgs/development/python-modules/xarray-einstats/default.nix
+++ b/pkgs/development/python-modules/xarray-einstats/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "xarray-einstats";
-  version = "0.2.2";
+  version = "0.3.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -22,8 +22,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "arviz-devs";
     repo = pname;
-    rev = "v${version}";
-    hash = "sha256-yc2dWKL9XhSSB7rUKS2uDCa4IyH/ajUf632Of2beY+4=";
+    rev = "refs/tags/v${version}";
+    hash = "sha256-N8ievasPaqusx51FCxcl1FGIjXooyBsRqsuRU73puRM=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/xbox-webapi/default.nix b/pkgs/development/python-modules/xbox-webapi/default.nix
index b16a87e2fd642..ccd2d3febf13c 100644
--- a/pkgs/development/python-modules/xbox-webapi/default.nix
+++ b/pkgs/development/python-modules/xbox-webapi/default.nix
@@ -44,6 +44,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   meta = with lib; {
     description = "Library to authenticate with Windows Live/Xbox Live and use their API";
     homepage = "https://github.com/OpenXbox/xbox-webapi-python";
diff --git a/pkgs/development/python-modules/xml2rfc/default.nix b/pkgs/development/python-modules/xml2rfc/default.nix
index be9323c774d8f..0612c98c8e7ea 100644
--- a/pkgs/development/python-modules/xml2rfc/default.nix
+++ b/pkgs/development/python-modules/xml2rfc/default.nix
@@ -26,15 +26,15 @@
 
 buildPythonPackage rec {
   pname = "xml2rfc";
-  version = "3.12.4";
+  version = "3.13.0";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "ietf-tools";
     repo = "xml2rfc";
-    rev = "v${version}";
-    sha256 = "sha256-TAu2Ls553t7wJ/Jhgu+Ff+H4P6az0Du8OL00JjZyCDs=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-z+OVlqIuLP6D5qvS4VxJFjjLiYKH7pDKqYCrvv9FHJ4=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/yamllint/default.nix b/pkgs/development/python-modules/yamllint/default.nix
index 0204b0f929682..b82e870161592 100644
--- a/pkgs/development/python-modules/yamllint/default.nix
+++ b/pkgs/development/python-modules/yamllint/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "yamllint";
-  version = "1.26.3";
+  version = "1.27.1";
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3934dcde484374596d6b52d8db412929a169f6d9e52e20f9ade5bf3523d9b96e";
+    sha256 = "sha256-5ogyS1hWCraKGjz/LApHTj/tNx3+jaXRuYF7ffVQOc4=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/zarr/default.nix b/pkgs/development/python-modules/zarr/default.nix
index 972bd527ad0fc..72cd251dcb318 100644
--- a/pkgs/development/python-modules/zarr/default.nix
+++ b/pkgs/development/python-modules/zarr/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "zarr";
-  version = "2.11.1";
+  version = "2.12.0";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-EbYo9C3sNuAUeHnovUcVJLWbI4CUubIePDW+eDmcEV4=";
+    sha256 = "sha256-UVox7kuta7SK4FF4xYiuSaAqNd76Ad2aMpMwaQM2gWU=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/zict/default.nix b/pkgs/development/python-modules/zict/default.nix
index 822a041e5d184..fa4122a7e8c67 100644
--- a/pkgs/development/python-modules/zict/default.nix
+++ b/pkgs/development/python-modules/zict/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "zict";
-  version = "2.1.0";
+  version = "2.2.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-FbLMFflaR2++BiP9j3ceHncTEL96AflUEqC2BbbkdRA=";
+    sha256 = "sha256-1zZsLiKTMUES3PJDIQhCime5J7AABWGf7vwxDRLYM/M=";
   };
 
   disabled = pythonOlder "3.6";
diff --git a/pkgs/development/python-modules/zigpy-znp/default.nix b/pkgs/development/python-modules/zigpy-znp/default.nix
index 789a152b6220e..5585324c0bc83 100644
--- a/pkgs/development/python-modules/zigpy-znp/default.nix
+++ b/pkgs/development/python-modules/zigpy-znp/default.nix
@@ -49,6 +49,10 @@ buildPythonPackage rec {
     asynctest
   ];
 
+  pytestFlagsArray = [
+    "--asyncio-mode=legacy"
+  ];
+
   pythonImportsCheck = [
     "zigpy_znp"
   ];
diff --git a/pkgs/development/python-modules/zope_configuration/default.nix b/pkgs/development/python-modules/zope_configuration/default.nix
index e3ede9f94aff4..b8d364b95ebbc 100644
--- a/pkgs/development/python-modules/zope_configuration/default.nix
+++ b/pkgs/development/python-modules/zope_configuration/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "zope.configuration";
-  version = "4.4.0";
+  version = "4.4.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e9f02bac44405ad1526399d6574b91d792f9694f9c67df8b64e91fe10fcddb3c";
+    sha256 = "sha256-giPqSvU5hmznqccwrH6xjlHRfrUVk6p3c7NZPI1tdgg=";
   };
 
   checkInputs = [ zope_testrunner manuel ];
diff --git a/pkgs/development/python-modules/zope_testrunner/default.nix b/pkgs/development/python-modules/zope_testrunner/default.nix
index 2638d43147841..273326baeb2a1 100644
--- a/pkgs/development/python-modules/zope_testrunner/default.nix
+++ b/pkgs/development/python-modules/zope_testrunner/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "zope.testrunner";
-  version = "5.4.0";
+  version = "5.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "4869229fc909e4aa8e76665a718f90dc88f73858b32ca5fa3dea6840e9210fb4";
+    sha256 = "sha256-/LhQZWGIoM380kmjt9Mw1JsVv7+DoQ8YW//cD6uQE+U=";
   };
 
   propagatedBuildInputs = [ zope_interface zope_exceptions zope_testing six ];
diff --git a/pkgs/development/python-modules/zstandard/default.nix b/pkgs/development/python-modules/zstandard/default.nix
index 5c0536166aab5..ea832cec6f1bc 100755
--- a/pkgs/development/python-modules/zstandard/default.nix
+++ b/pkgs/development/python-modules/zstandard/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "zstandard";
-  version = "0.17.0";
+  version = "0.18.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fa9194cb91441df7242aa3ddc4cb184be38876cb10dd973674887f334bafbfb6";
+    sha256 = "sha256-CsA1eg2YW0/zGoVHRAQNe1dUOF0fmPcUXDDgLGhly28=";
   };
 
   propagatedNativeBuildInputs = [
diff --git a/pkgs/development/python-modules/zstd/default.nix b/pkgs/development/python-modules/zstd/default.nix
index 468b5b5315ab1..8599c7495ad93 100644
--- a/pkgs/development/python-modules/zstd/default.nix
+++ b/pkgs/development/python-modules/zstd/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "zstd";
-  version = "1.5.1.0";
+  version = "1.5.2.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9519bb0cd91c4498cd8cf66ef88fb22e5d6a442317704e6afd00b12726d17d0a";
+    sha256 = "sha256-PEKbFmo7MksJg7/1OuCSi5dkxpOgF/Yv+2sg5hNeM48=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/tools/aws-sam-cli/default.nix b/pkgs/development/tools/aws-sam-cli/default.nix
index 52bd88619c99a..3c9c81a625c92 100644
--- a/pkgs/development/tools/aws-sam-cli/default.nix
+++ b/pkgs/development/tools/aws-sam-cli/default.nix
@@ -5,11 +5,11 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "aws-sam-cli";
-  version = "1.52.0";
+  version = "1.53.0";
 
   src = python3.pkgs.fetchPypi {
     inherit pname version;
-    hash = "sha256-ldr0X+I5+Nfb+WBDOe0m202WOuccGUI5HFL3fpbBNPo=";
+    hash = "sha256-kIW+aGYuS+JgOMsPbeLgPSgLFNKLSqHaZ1CHpjs/IVI=";
   };
 
   propagatedBuildInputs = with python3.pkgs; [
@@ -47,11 +47,12 @@ python3.pkgs.buildPythonApplication rec {
   postPatch = ''
     substituteInPlace requirements/base.txt \
       --replace "aws_lambda_builders==" "aws-lambda-builders #" \
+      --replace "aws-sam-translator==1.46.0" "aws-sam-translator~=1.46" \
       --replace "click~=7.1" "click~=8.1" \
       --replace "cookiecutter~=1.7.2" "cookiecutter>=1.7.2" \
       --replace "dateparser~=1.0" "dateparser>=0.7" \
       --replace "docker~=4.2.0" "docker>=4.2.0" \
-      --replace "Flask~=1.1.2" "Flask~=2.0" \
+      --replace "Flask~=1.1.4" "Flask~=2.0" \
       --replace "jmespath~=0.10.0" "jmespath" \
       --replace "MarkupSafe==2.0.1" "MarkupSafe #" \
       --replace "PyYAML~=5.3" "PyYAML #" \
diff --git a/pkgs/development/tools/backblaze-b2/default.nix b/pkgs/development/tools/backblaze-b2/default.nix
index b46ad5efc881e..6df8edd02c969 100644
--- a/pkgs/development/tools/backblaze-b2/default.nix
+++ b/pkgs/development/tools/backblaze-b2/default.nix
@@ -17,6 +17,10 @@ python3Packages.buildPythonApplication rec {
       --replace 'setuptools_scm<6.0' 'setuptools_scm'
   '';
 
+  nativeBuildInputs = with python3Packages; [
+    setuptools-scm
+  ];
+
   propagatedBuildInputs = with python3Packages; [
     b2sdk
     phx-class-registry
@@ -25,16 +29,14 @@ python3Packages.buildPythonApplication rec {
     rst2ansi
   ];
 
-  nativeBuildInputs = with python3Packages; [
-    setuptools-scm
-  ];
-
   checkInputs = with python3Packages; [
     pytestCheckHook
   ];
 
   disabledTests = [
+    # require network
     "test_files_headers"
+    "test_copy_file_by_id"
     "test_integration"
     "test_get_account_info"
   ];
@@ -53,6 +55,5 @@ python3Packages.buildPythonApplication rec {
     homepage = "https://github.com/Backblaze/B2_Command_Line_Tool";
     license = licenses.mit;
     maintainers = with maintainers; [ hrdinka kevincox ];
-    platforms = platforms.unix;
   };
 }
diff --git a/pkgs/development/tools/rust/maturin/default.nix b/pkgs/development/tools/rust/maturin/default.nix
index 204654eb0e782..b276a618110f1 100644
--- a/pkgs/development/tools/rust/maturin/default.nix
+++ b/pkgs/development/tools/rust/maturin/default.nix
@@ -11,16 +11,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "maturin";
-  version = "0.12.9";
+  version = "0.13.0";
 
   src = fetchFromGitHub {
     owner = "PyO3";
     repo = "maturin";
     rev = "v${version}";
-    hash = "sha256-FskCBviLl1yafPOlsp/IjaEOlGUuWLcGlxDrNA/qf8k=";
+    hash = "sha256-uKpYI+Oc49xgoIZCh72baBMZLcpMXk7g2Jb1DQxW9lk=";
   };
 
-  cargoHash = "sha256-zakSQptKK/X/8MDJxRUHTDIGPh77cq5PrOmPEneD0YM=";
+  cargoHash = "sha256-levBWghFIXOXe+NGXvwBqQpPmWeUK53ruSyLik1urSU=";
 
   nativeBuildInputs = [ pkg-config ];
 
diff --git a/pkgs/servers/calibre-web/default.nix b/pkgs/servers/calibre-web/default.nix
index 9e7a9cae17309..1505f6894a650 100644
--- a/pkgs/servers/calibre-web/default.nix
+++ b/pkgs/servers/calibre-web/default.nix
@@ -55,10 +55,12 @@ python3.pkgs.buildPythonApplication rec {
 
     substituteInPlace setup.cfg \
       --replace "cps = calibreweb:main" "calibre-web = calibreweb:main" \
+      --replace "chardet>=3.0.0,<4.1.0" "chardet>=3.0.0,<6" \
       --replace "Flask>=1.0.2,<2.1.0" "Flask>=1.0.2" \
       --replace "Flask-Login>=0.3.2,<0.5.1" "Flask-Login>=0.3.2" \
       --replace "flask-wtf>=0.14.2,<1.1.0" "flask-wtf>=0.14.2" \
       --replace "lxml>=3.8.0,<4.9.0" "lxml>=3.8.0" \
+      --replace "tornado>=4.1,<6.2" "tornado>=4.1,<7" \
       --replace "PyPDF3>=1.0.0,<1.0.7" "PyPDF3>=1.0.0" \
       --replace "requests>=2.11.1,<2.28.0" "requests" \
       --replace "unidecode>=0.04.19,<1.4.0" "unidecode>=0.04.19" \
diff --git a/pkgs/servers/home-assistant/default.nix b/pkgs/servers/home-assistant/default.nix
index b4ecc4bc37a33..671ee2dee47c0 100644
--- a/pkgs/servers/home-assistant/default.nix
+++ b/pkgs/servers/home-assistant/default.nix
@@ -30,6 +30,18 @@ let
   defaultOverrides = [
     # Override the version of some packages pinned in Home Assistant's setup.py and requirements_all.txt
 
+    (self: super: {
+      backoff = super.backoff.overridePythonAttrs (oldAttrs: rec {
+        version = "1.11.1";
+        src = fetchFromGitHub {
+          owner = "litl";
+          repo = "backoff";
+          rev = "v${version}";
+          hash = "sha256-87IMcLaoCn0Vns8Ub/AFmv0gXtS0aPZX0cSt7+lOPm4=";
+        };
+      });
+    })
+
     (self: super: {
       bsblan = super.bsblan.overridePythonAttrs (oldAttrs: rec {
         version = "0.5.0";
@@ -214,6 +226,7 @@ in python.pkgs.buildPythonApplication rec {
       "bcrypt"
       "cryptography"
       "httpx"
+      "ifaddr"
       "orjson"
       "PyJWT"
       "requests"
diff --git a/pkgs/tools/admin/awscli/default.nix b/pkgs/tools/admin/awscli/default.nix
index 4fcd39a8c46fb..c997acd60ef29 100644
--- a/pkgs/tools/admin/awscli/default.nix
+++ b/pkgs/tools/admin/awscli/default.nix
@@ -35,17 +35,17 @@ let
 in
 with py.pkgs; buildPythonApplication rec {
   pname = "awscli";
-  version = "1.22.88"; # N.B: if you change this, change botocore and boto3 to a matching version too
+  version = "1.25.31"; # N.B: if you change this, change botocore and boto3 to a matching version too
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-fwbejwcT4piC8Zr6+ubxMd+TuF9O4icOentI2GlhYrc=";
+    hash = "sha256-z5FA8Xmv8Abqh/ckYB5Bcgwrnd0FlHJQJi562tLZ3hE=";
   };
 
   # https://github.com/aws/aws-cli/issues/4837
   postPatch = ''
     substituteInPlace setup.py \
-      --replace "docutils>=0.10,<0.16" "docutils>=0.10" \
+      --replace "docutils>=0.10,<0.17" "docutils>=0.10" \
       --replace "rsa>=3.1.2,<4.8" "rsa<5,>=3.1.2"
   '';
 
diff --git a/pkgs/tools/admin/awscli2/default.nix b/pkgs/tools/admin/awscli2/default.nix
index 1d4e7a5f2fc25..9a4ffe3d28e4b 100644
--- a/pkgs/tools/admin/awscli2/default.nix
+++ b/pkgs/tools/admin/awscli2/default.nix
@@ -22,6 +22,8 @@ let
           inherit version;
           sha256 = "sha256-uF0FZ7hmYUmpMXJxLmiSBzQzPAzn6Jt4s+mH9x5e1Pk=";
         };
+        # pypi missing test suite
+        doCheck = false;
       });
     };
   };
@@ -71,6 +73,7 @@ with py.pkgs; buildPythonApplication rec {
       --replace "docutils>=0.10,<0.16" "docutils" \
       --replace "ruamel.yaml>=0.15.0,<0.16.0" "ruamel.yaml" \
       --replace "wcwidth<0.2.0" "wcwidth" \
+      --replace "prompt-toolkit>=3.0.24,<3.0.29" "prompt-toolkit~=3.0" \
       --replace "distro>=1.5.0,<1.6.0" "distro"
   '';
 
diff --git a/pkgs/tools/admin/pgadmin/default.nix b/pkgs/tools/admin/pgadmin/default.nix
index 58bba70e9029f..4813cd843647f 100644
--- a/pkgs/tools/admin/pgadmin/default.nix
+++ b/pkgs/tools/admin/pgadmin/default.nix
@@ -32,7 +32,7 @@ let
     flask_login
     flask_mail
     flask_migrate
-    flask_sqlalchemy
+    flask-sqlalchemy
     flask-wtf
     flask-compress
     passlib
diff --git a/pkgs/tools/misc/swaglyrics/default.nix b/pkgs/tools/misc/swaglyrics/default.nix
index 8fff712c323f2..8c5a3b7e9474b 100644
--- a/pkgs/tools/misc/swaglyrics/default.nix
+++ b/pkgs/tools/misc/swaglyrics/default.nix
@@ -16,6 +16,11 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-O48T1WsUIVnNQb8gmzSkFFHTOiFOKVSAEYhF9zUqZz0=";
   };
 
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "==" ">="
+  '';
+
   propagatedBuildInputs = with python3.pkgs; [
     beautifulsoup4
     colorama
@@ -35,13 +40,6 @@ python3.pkgs.buildPythonApplication rec {
     ncurses
   ];
 
-  preConfigure = ''
-    substituteInPlace setup.py \
-      --replace 'beautifulsoup4==4.9.3' 'beautifulsoup4>=4.9.3' \
-      --replace 'unidecode==1.2.0' 'unidecode>=1.2.0' \
-      --replace 'flask==2.0.1' 'flask>=2.0.1'
-  '';
-
   preBuild = ''
     export HOME=$(mktemp -d)
   '';
@@ -64,6 +62,5 @@ python3.pkgs.buildPythonApplication rec {
     homepage = "https://github.com/SwagLyrics/SwagLyrics-For-Spotify";
     license = licenses.mit;
     maintainers = with maintainers; [ siraben ];
-    platforms = platforms.unix;
   };
 }
diff --git a/pkgs/tools/security/atomic-operator/default.nix b/pkgs/tools/security/atomic-operator/default.nix
index c4e07b4d3418f..b385cce380612 100644
--- a/pkgs/tools/security/atomic-operator/default.nix
+++ b/pkgs/tools/security/atomic-operator/default.nix
@@ -12,9 +12,14 @@ python3.pkgs.buildPythonApplication rec {
     owner = "swimlane";
     repo = pname;
     rev = version;
-    hash = "sha256-fO8bvzeMdJVWlhpzdTmJo9mrT6iorsLqr/GPF9gvE70=";
+    hash = "sha256-DyNqu3vndyLkmfybCfTbgxk3t/ALg7IAkAMg4kBkH7Q=";
   };
 
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "charset_normalizer~=2.0.0" "charset_normalizer"
+  '';
+
   propagatedBuildInputs = with python3.pkgs; [
     attrs
     certifi
diff --git a/pkgs/tools/security/ioccheck/default.nix b/pkgs/tools/security/ioccheck/default.nix
index e936ab025fad6..8dd833f9d28fb 100644
--- a/pkgs/tools/security/ioccheck/default.nix
+++ b/pkgs/tools/security/ioccheck/default.nix
@@ -6,6 +6,16 @@
 let
   py = python3.override {
     packageOverrides = self: super: {
+      emoji = super.emoji.overridePythonAttrs (oldAttrs: rec {
+        version = "1.7.0";
+
+        src = fetchFromGitHub {
+          owner = "carpedm20";
+          repo = "emoji";
+          rev = "v${version}";
+          sha256 = "sha256-vKQ51RP7uy57vP3dOnHZRSp/Wz+YDzeLUR8JnIELE/I=";
+        };
+      });
 
       # Support for later tweepy releases is missing
       # https://github.com/ranguli/ioccheck/issues/70
diff --git a/pkgs/tools/text/html-tidy/default.nix b/pkgs/tools/text/html-tidy/default.nix
index d80b8e8c899cd..1f9c04b7c9dbb 100644
--- a/pkgs/tools/text/html-tidy/default.nix
+++ b/pkgs/tools/text/html-tidy/default.nix
@@ -8,7 +8,7 @@ stdenv.mkDerivation rec {
     owner = "htacg";
     repo = "tidy-html5";
     rev = version;
-    sha256 = "sha256-ZMz0NySxzX2XHiqB8f5asvwjIG6kdIcq8Gb3EbAxBaU=";
+    hash = "sha256-vzVWQodwzi3GvC9IcSQniYBsbkJV20iZanF33A0Gpe0=";
   };
 
   # https://github.com/htacg/tidy-html5/pull/1036
diff --git a/pkgs/tools/virtualization/awsebcli/default.nix b/pkgs/tools/virtualization/awsebcli/default.nix
index 7c892339fedea..961d8f9a9dbdf 100644
--- a/pkgs/tools/virtualization/awsebcli/default.nix
+++ b/pkgs/tools/virtualization/awsebcli/default.nix
@@ -16,19 +16,8 @@ let
       self = localPython;
       packageOverrides = self: super: {
         cement = changeVersion super.cement.overridePythonAttrs "2.8.2" "1li2whjzfhbpg6fjb6r1r92fb3967p1xv6hqs3j787865h2ysrc7";
-        botocore = changeVersion super.botocore.overridePythonAttrs "1.23.54" "sha256-S7m6FszO5fWiYCBJvD4ttoZTRrJVBmfzATvfM7CgHOs=";
-        jmespath = changeVersion super.jmespath.overridePythonAttrs "0.10.0" "b85d0567b8666149a93172712e68920734333c0ce7e89b78b3e987f71e5ed4f9";
         colorama = changeVersion super.colorama.overridePythonAttrs "0.4.3" "189n8hpijy14jfan4ha9f5n06mnl33cxz7ay92wjqgkr639s0vg9";
         future = changeVersion super.future.overridePythonAttrs "0.16.0" "1nzy1k4m9966sikp0qka7lirh8sqrsyainyf8rk97db7nwdfv773";
-        requests = super.requests.overridePythonAttrs (oldAttrs: rec {
-          version = "2.26.0";
-          checkInputs = oldAttrs.checkInputs ++ [ super.trustme ];
-          src = oldAttrs.src.override {
-            inherit version;
-            hash = "sha256-uKpY+M95P/2HgtPYyxnmbvNverpDU+7IWedGeLAbB6c=";
-          };
-        }
-        );
         wcwidth = changeVersion super.wcwidth.overridePythonAttrs "0.1.9" "1wf5ycjx8s066rdvr0fgz4xds9a8zhs91c4jzxvvymm1c8l8cwzf";
         semantic-version = changeVersion super.semantic-version.overridePythonAttrs "2.8.5" "d2cb2de0558762934679b9a104e82eca7af448c9f4974d1f3eeccff651df8a54";
         pyyaml = super.pyyaml.overridePythonAttrs (oldAttrs: rec {
@@ -58,7 +47,11 @@ with localPython.pkgs; buildPythonApplication rec {
 
 
   preConfigure = ''
-    substituteInPlace setup.py --replace "six>=1.11.0,<1.15.0" "six"
+    substituteInPlace setup.py \
+      --replace "six>=1.11.0,<1.15.0" "six==1.16.0" \
+      --replace "requests>=2.20.1,<=2.26" "requests==2.28.1" \
+      --replace "jmespath>=0.7.1,<1.0.0" "jmespath==1.0.1" \
+      --replace "botocore>1.23.41,<1.24.0" "botocore==1.27.31"
   '';
 
   buildInputs = [
diff --git a/pkgs/top-level/python-aliases.nix b/pkgs/top-level/python-aliases.nix
index 58223bafd5ba7..b5f3a9b39a319 100644
--- a/pkgs/top-level/python-aliases.nix
+++ b/pkgs/top-level/python-aliases.nix
@@ -73,6 +73,7 @@ mapAliases ({
   email_validator = email-validator; # added 2022-06-22
   fake_factory = throw "fake_factory has been removed because it is unused and deprecated by upstream since 2016."; # added 2022-05-30
   faulthandler = throw "faulthandler is built into ${python.executable}"; # added 2021-07-12
+  flask_sqlalchemy = flask-sqlalchemy; # added 2022-07-20
   flask_testing = flask-testing; # added 2022-04-25
   flask_wtf = flask-wtf; # added 2022-05-24
   garminconnect-ha = garminconnect; # added 2022-02-05
@@ -127,6 +128,14 @@ mapAliases ({
   pymc3 = pymc; # added 2022-06-05, module was rename starting with 4.0.0
   pymssql = throw "pymssql has been abandoned upstream."; # added 2020-05-04
   pyreadability = readability-lxml; # added 2022-05-24
+  pyroute2-core = throw "pyroute2 migrated back to a single package scheme in version 0.7.1"; # added 2022-07-16
+  pyroute2-ethtool = throw "pyroute2 migrated back to a single package scheme in version 0.7.1"; # added 2022-07-16
+  pyroute2-ipdb = throw "pyroute2 migrated back to a single package scheme in version 0.7.1"; # added 2022-07-16
+  pyroute2-ipset = throw "pyroute2 migrated back to a single package scheme in version 0.7.1"; # added 2022-07-16
+  pyroute2-ndb = throw "pyroute2 migrated back to a single package scheme in version 0.7.1"; # added 2022-07-16
+  pyroute2-nftables = throw "pyroute2 migrated back to a single package scheme in version 0.7.1"; # added 2022-07-16
+  pyroute2-nslink = throw "pyroute2 migrated back to a single package scheme in version 0.7.1"; # added 2022-07-16
+  pyroute2-protocols = throw "pyroute2 migrated back to a single package scheme in version 0.7.1"; # added 2022-07-16
   pysmart-smartx = pysmart; # added 2021-10-22
   pyspotify = throw "pyspotify has been removed because Spotify stopped supporting libspotify"; # added 2022-05-29
   pytest_6 = pytest; # added 2022-02-10
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index b5d8bf26e986d..4f461c440762a 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -1189,6 +1189,8 @@ in {
 
   basemap = callPackage ../development/python-modules/basemap { };
 
+  basemap-data = callPackage ../development/python-modules/basemap-data { };
+
   bash_kernel = callPackage ../development/python-modules/bash_kernel { };
 
   bashlex = callPackage ../development/python-modules/bashlex { };
@@ -3219,7 +3221,7 @@ in {
 
   flask-sockets = callPackage ../development/python-modules/flask-sockets { };
 
-  flask_sqlalchemy = callPackage ../development/python-modules/flask-sqlalchemy { };
+  flask-sqlalchemy = callPackage ../development/python-modules/flask-sqlalchemy { };
 
   flask-sslify = callPackage ../development/python-modules/flask-sslify { };
 
@@ -6989,6 +6991,8 @@ in {
     inherit (pkgs.darwin.apple_sdk.frameworks) IOKit;
   };
 
+  psycopg = callPackage ../development/python-modules/psycopg { };
+
   psycopg2 = callPackage ../development/python-modules/psycopg2 { };
 
   psycopg2cffi = callPackage ../development/python-modules/psycopg2cffi { };
@@ -8048,22 +8052,6 @@ in {
 
   pyroute2 = callPackage ../development/python-modules/pyroute2 { };
 
-  pyroute2-core = callPackage ../development/python-modules/pyroute2-core { };
-
-  pyroute2-ethtool = callPackage ../development/python-modules/pyroute2-ethtool { };
-
-  pyroute2-ipdb = callPackage ../development/python-modules/pyroute2-ipdb { };
-
-  pyroute2-ipset = callPackage ../development/python-modules/pyroute2-ipset { };
-
-  pyroute2-ndb = callPackage ../development/python-modules/pyroute2-ndb { };
-
-  pyroute2-nftables = callPackage ../development/python-modules/pyroute2-nftables { };
-
-  pyroute2-nslink = callPackage ../development/python-modules/pyroute2-nslink { };
-
-  pyroute2-protocols = callPackage ../development/python-modules/pyroute2-protocols { };
-
   pyrr = callPackage ../development/python-modules/pyrr { };
 
   pyrsistent = callPackage ../development/python-modules/pyrsistent { };
@@ -8294,12 +8282,7 @@ in {
 
   pytesseract = callPackage ../development/python-modules/pytesseract { };
 
-  pytest = callPackage ../development/python-modules/pytest {
-    # hypothesis tests require pytest that causes dependency cycle
-    hypothesis = self.hypothesis.override {
-      doCheck = false;
-    };
-  };
+  pytest = callPackage ../development/python-modules/pytest { };
 
   pytest-aio = callPackage ../development/python-modules/pytest-aio { };
 
@@ -9502,6 +9485,8 @@ in {
 
   safe = callPackage ../development/python-modules/safe { };
 
+  safeio = callPackage ../development/python-modules/safeio { };
+
   safety = callPackage ../development/python-modules/safety { };
 
   sagemaker = callPackage ../development/python-modules/sagemaker { };
@@ -10105,6 +10090,8 @@ in {
 
   sphinx-autobuild = callPackage ../development/python-modules/sphinx-autobuild { };
 
+  sphinx-autodoc-typehints = callPackage ../development/python-modules/sphinx-autodoc-typehints { };
+
   sphinx-basic-ng = callPackage ../development/python-modules/sphinx-basic-ng { };
 
   sphinx-copybutton = callPackage ../development/python-modules/sphinx-copybutton { };