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Releases: NeurodataWithoutBorders/pynwb

1.0.3

18 Jul 21:25
1.0.3
0e8b7b0
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New/modified functionality:

  • Add MPI functionality to NWBHDF5IO (@bendichter)
  • Add option to exclude columns from DynamicTable.to_dataframe() (@NileGraddis)
  • Remove ability to add DecompositionSeries to LFP (@bendichter)
  • Remove num_samples from TimeSeries (@NileGraddis)
  • Automatically detect ragged arrays in from_dataframe (@bendichter)
  • Cache the spec by default on write (@rly)
  • Improve printing of NWB objects (@rly)
  • Change ProcessingModule.add_data_interface() to .add(), ProcessingModule.get_data_interface() to .get(), NWBFile.modules to NWBFile.processing (@bendichter)
  • Remove unused SpecFile type (@oruebel)
  • Add ability to validate files against the cached spec (@t-b)
  • Make CurrentClampSeries/VoltageClampSeries parameters optional (@t-b)
  • Update documentation (@t-b, @rly)
  • Update copyright/license
  • Improve tests and CI
  • Update requirements
  • See also HDMF changes https://github.com/hdmf-dev/hdmf/releases/tag/1.0.4

Bug fixes:

  • Fix dynamictableregion iteration failure after roundtrip (@NileGraddis)
  • Fix from_dataframe for children of DynamicTable (@bendichter)
  • Fix for modular (cross-file) storage of timeseries timestamps (@NileGraddis)
  • Fix bug on loading lists of strings from hdmf 1.0.4 (@rly)
  • Fix IO for intervals (@bendichter)
  • Fix round trip for Subject.date_of_birth (@bendichter)

Schema changes:

  • DecompositionSeries "source_timeseries" link is no longer required (@bendichter)
  • Reorder keys (@rly)
  • Remove NWBFile "specifications" group (@oruebel)
  • CorrectedImageStack and ImagingRetinotopy inherits from NWBDataInterface instead of NWBContainer (@rly)
  • Fix typo in unit of resistance_comp_prediction/correction (@t-b)
  • Add option for third dimension for Units "waveforms" dataset to represent different electrodes (@bendichter)
  • Update NWBFile.nwb_version to 2.0.2

1.0.2

19 Apr 20:17
1.0.2
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pynwb 1.0.2

1.0.1

15 Mar 00:03
2cbb725
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pynwb 1.0.1

1.0.0

19 Jan 02:07
7578931
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pynwb 1.0.0

0.6.2

10 Dec 16:43
0.6.2
779fa25
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pynwb 0.6.2

0.6.1

17 Nov 00:07
0.6.1
35a52c6
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pynwb 0.6.1

0.6.0

12 Nov 18:19
0.6.0
dea0722
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pynwb 0.6.0

0.5.1

17 Sep 20:47
0.5.1
91676cc
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pynwb 0.5.1

0.4.1

31 Jul 01:19
0.4.1
44b6950
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pynwb 0.4.1

0.4.0

30 Jul 19:26
0.4.0
8db14b0
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pynwb 0.4.0