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Add ontology support #15

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ajtritt opened this issue Mar 23, 2017 · 3 comments
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Add ontology support #15

ajtritt opened this issue Mar 23, 2017 · 3 comments
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category: enhancement improvements of code or code behavior priority: high impacts proper operation or use of feature important to most users
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@ajtritt
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ajtritt commented Mar 23, 2017

Originally reported by: Andrew Tritt (Bitbucket: ajtritt, GitHub: ajtritt)

Spec objects should support adding ontology and ontology id
@ajtritt ajtritt added priority: high impacts proper operation or use of feature important to most users category: enhancement improvements of code or code behavior labels Aug 3, 2017
@oruebel oruebel modified the milestones: NWB 2.x, Future Oct 23, 2017
@bendichter bendichter mentioned this issue May 11, 2018
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@rly rly added the Epic label Nov 4, 2020
@rly rly removed the Epic label Sep 10, 2021
@oruebel
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oruebel commented Sep 10, 2021 •
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Related issues:

A solution for this is currently being developed in HDMF:

@oruebel oruebel mentioned this issue Sep 11, 2021
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@bendichter
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@rly , @oruebel I'm thinking about creating a tutorial in PyNWB to illustrate best practices in using ndx-external-resources. What do you think?

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rly commented Nov 7, 2024

There are still questions about whether the HERD data is integrated within the NWB file or outside the NWB file before upload to DANDI though. Otherwise, HERD is pretty much done. See https://hdmf.readthedocs.io/en/stable/tutorials/plot_external_resources.html .

A tutorial in PyNWB would be a good idea. @mavaylon1 is working on #1781

@stephprince stephprince mentioned this issue Nov 7, 2024
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