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GWAS QC, PCA, haplotype phasing, genotype imputation

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GWASpy

install status PyPI version

Genome-wide association studies pypeline (GWASpy): A Python package for performing GWAS QC, PCA, haplotype phasing, and genotype imputation.

Installation

GWASpy is available through PyPI. To install, run the command:

pip3 install gwaspy

Usage

For usage, please visit GWASpy

Copyright and License

GWASpy is generously distributed under the MIT License

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  • Python 97.5%
  • Dockerfile 1.6%
  • Shell 0.9%