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seq2seq_model.py
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seq2seq_model.py
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import json
import logging
import math
import os
import random
import warnings
from dataclasses import asdict
from multiprocessing import Pool, cpu_count
from pathlib import Path
import numpy as np
import pandas as pd
import torch
from tensorboardX import SummaryWriter
from torch.nn.utils.rnn import pad_sequence
from torch.utils.data import DataLoader, Dataset, RandomSampler, SequentialSampler
from torch.utils.data.distributed import DistributedSampler
from tqdm.auto import tqdm, trange
from transformers import (
AdamW,
AutoConfig,
AutoModel,
AutoTokenizer,
BartConfig,
BartForConditionalGeneration,
BartTokenizer,
BlenderbotConfig,
BlenderbotTokenizer,
BlenderbotForConditionalGeneration,
BlenderbotSmallConfig,
# BlenderbotSmallForConditionalGeneration,
BlenderbotSmallTokenizer,
BertConfig,
BertForMaskedLM,
BertModel,
BertTokenizer,
PreTrainedModel,
PreTrainedTokenizer,
RobertaConfig,
RobertaModel,
RobertaTokenizer,
get_linear_schedule_with_warmup,
)
from simpletransformers.config.global_args import global_args
# from modeling_blenderbot_small import BlenderbotSmallForConditionalGeneration
from simpletransformers.config.model_args import Seq2SeqArgs
from seq2seq_utils import Seq2SeqDataset, SimpleSummarizationDataset
try:
import wandb
wandb_available = True
except ImportError:
wandb_available = False
logger = logging.getLogger(__name__)
MODEL_CLASSES = {
"auto": (AutoConfig, AutoModel, AutoTokenizer),
"bart": (BartConfig, BartForConditionalGeneration, BartTokenizer),
"bert": (BertConfig, BertModel, BertTokenizer),
"roberta": (RobertaConfig, RobertaModel, RobertaTokenizer),
# "blender": (BlenderbotSmallConfig, BlenderbotSmallForConditionalGeneration, BlenderbotSmallTokenizer),
# "blender-large": (BlenderbotConfig, BlenderbotForConditionalGeneration, BlenderbotTokenizer)
}
class Seq2SeqModel:
def __init__(
self,
encoder_type=None,
encoder_name=None,
decoder_name=None,
encoder_decoder_type=None,
encoder_decoder_name=None,
config=None,
args=None,
use_cuda=True,
cuda_device=-1,
**kwargs
):
"""
Initializes a Seq2SeqModel.
Args:
encoder_type (optional): The type of model to use as the encoder.
encoder_name (optional): The exact architecture and trained weights to use. This may be a Hugging Face Transformers compatible pre-trained model, a community model, or the path to a directory containing model files.
decoder_name (optional): The exact architecture and trained weights to use. This may be a Hugging Face Transformers compatible pre-trained model, a community model, or the path to a directory containing model files.
Must be the same "size" as the encoder model (base/base, large/large, etc.)
encoder_decoder_type (optional): The type of encoder-decoder model. (E.g. bart)
encoder_decoder_name (optional): The path to a directory containing the saved encoder and decoder of a Seq2SeqModel. (E.g. "outputs/") OR a valid BART or MarianMT model.
config (optional): A configuration file to build an EncoderDecoderModel.
args (optional): Default args will be used if this parameter is not provided. If provided, it should be a dict containing the args that should be changed in the default args.
use_cuda (optional): Use GPU if available. Setting to False will force model to use CPU only.
cuda_device (optional): Specific GPU that should be used. Will use the first available GPU by default.
**kwargs (optional): For providing proxies, force_download, resume_download, cache_dir and other options specific to the 'from_pretrained' implementation where this will be supplied.
""" # noqa: ignore flake8"
if not config:
# if not ((encoder_name and decoder_name) or encoder_decoder_name) and not encoder_type:
if not ((encoder_name and decoder_name) or encoder_decoder_name):
raise ValueError(
"You must specify a Seq2Seq config \t OR \t"
"encoder_type, encoder_name, and decoder_name OR \t \t"
"encoder_type and encoder_decoder_name"
)
elif not (encoder_type or encoder_decoder_type):
raise ValueError(
"You must specify a Seq2Seq config \t OR \t"
"encoder_type, encoder_name, and decoder_name \t OR \t"
"encoder_type and encoder_decoder_name"
)
self.args = self._load_model_args(encoder_decoder_name)
if isinstance(args, dict):
self.args.update_from_dict(args)
elif isinstance(args, Seq2SeqArgs):
self.args = args
if "sweep_config" in kwargs:
sweep_config = kwargs.pop("sweep_config")
sweep_values = {key: value["value"] for key, value in sweep_config.as_dict().items() if key != "_wandb"}
self.args.update_from_dict(sweep_values)
if self.args.manual_seed:
random.seed(self.args.manual_seed)
np.random.seed(self.args.manual_seed)
torch.manual_seed(self.args.manual_seed)
if self.args.n_gpu > 0:
torch.cuda.manual_seed_all(self.args.manual_seed)
if use_cuda:
if torch.cuda.is_available():
if cuda_device == -1:
self.device = torch.device("cuda")
else:
self.device = torch.device(f"cuda:{cuda_device}")
else:
raise ValueError(
"'use_cuda' set to True when cuda is unavailable."
"Make sure CUDA is available or set `use_cuda=False`."
)
else:
self.device = "cpu"
self.results = {}
if not use_cuda:
self.args.fp16 = False
# config = EncoderDecoderConfig.from_encoder_decoder_configs(config, config)
if encoder_decoder_type:
config_class, model_class, tokenizer_class = MODEL_CLASSES[encoder_decoder_type]
else:
config_class, model_class, tokenizer_class = MODEL_CLASSES[encoder_type]
if encoder_decoder_type in ["bart", "marian", "blender", "blender-large"]:
self.model = model_class.from_pretrained(encoder_decoder_name)
if encoder_decoder_type in ["bart", "blender", "blender-large"]:
self.encoder_tokenizer = tokenizer_class.from_pretrained(encoder_decoder_name)
# self.encoder_tokenizer = tokenizer_class.from_pretrained(encoder_decoder_name, additional_special_tokens=['__defi__', '__sim__'])
# self.model.resize_token_embeddings(len(self.encoder_tokenizer))
elif encoder_decoder_type == "marian":
if self.args.base_marian_model_name:
self.encoder_tokenizer = tokenizer_class.from_pretrained(self.args.base_marian_model_name)
else:
self.encoder_tokenizer = tokenizer_class.from_pretrained(encoder_decoder_name)
self.decoder_tokenizer = self.encoder_tokenizer
self.config = self.model.config
else:
if encoder_decoder_name:
# self.model = EncoderDecoderModel.from_pretrained(encoder_decoder_name)
self.model = EncoderDecoderModel.from_encoder_decoder_pretrained(
os.path.join(encoder_decoder_name, "encoder"), os.path.join(encoder_decoder_name, "decoder")
)
self.model.encoder = model_class.from_pretrained(os.path.join(encoder_decoder_name, "encoder"))
self.model.decoder = BertForMaskedLM.from_pretrained(os.path.join(encoder_decoder_name, "decoder"))
self.encoder_tokenizer = tokenizer_class.from_pretrained(os.path.join(encoder_decoder_name, "encoder"))
self.decoder_tokenizer = BertTokenizer.from_pretrained(os.path.join(encoder_decoder_name, "decoder"))
else:
self.model = EncoderDecoderModel.from_encoder_decoder_pretrained(
encoder_name, decoder_name, config=config
)
self.encoder_tokenizer = tokenizer_class.from_pretrained(encoder_name)
self.decoder_tokenizer = BertTokenizer.from_pretrained(decoder_name)
self.encoder_config = self.model.config.encoder
self.decoder_config = self.model.config.decoder
if self.args.wandb_project and not wandb_available:
warnings.warn("wandb_project specified but wandb is not available. Wandb disabled.")
self.args.wandb_project = None
if encoder_decoder_name:
self.args.model_name = encoder_decoder_name
# # Checking if we are loading from a saved model or using a pre-trained model
# if not saved_model_args and encoder_decoder_type == "marian":
# Need to store base pre-trained model name to get the tokenizer when loading a saved model
self.args.base_marian_model_name = encoder_decoder_name
elif encoder_name and decoder_name:
self.args.model_name = encoder_name + "-" + decoder_name
else:
self.args.model_name = "encoder-decoder"
if encoder_decoder_type:
self.args.model_type = encoder_decoder_type
elif encoder_type:
self.args.model_type = encoder_type + "-bert"
else:
self.args.model_type = "encoder-decoder"
def train_model(
self, train_data, output_dir=None, show_running_loss=True, args=None, eval_data=None, verbose=True, **kwargs,
):
"""
Trains the model using 'train_data'
Args:
train_data: Pandas DataFrame containing the 2 columns - `input_text`, `target_text`.
- `input_text`: The input text sequence.
- `target_text`: The target text sequence
output_dir: The directory where model files will be saved. If not given, self.args.output_dir will be used.
show_running_loss (optional): Set to False to prevent running loss from being printed to console. Defaults to True.
args (optional): Optional changes to the args dict of the model. Any changes made will persist for the model.
eval_data (optional): A DataFrame against which evaluation will be performed when evaluate_during_training is enabled. Is required if evaluate_during_training is enabled.
**kwargs: Additional metrics that should be used. Pass in the metrics as keyword arguments (name of metric: function to use).
A metric function should take in two parameters. The first parameter will be the true labels, and the second parameter will be the predictions. Both inputs
will be lists of strings. Note that this will slow down training significantly as the predicted sequences need to be generated.
Returns:
None
""" # noqa: ignore flake8"
if args:
self.args.update_from_dict(args)
# if self.args.silent:
# show_running_loss = False
if self.args.evaluate_during_training and eval_data is None:
raise ValueError(
"evaluate_during_training is enabled but eval_data is not specified."
" Pass eval_data to model.train_model() if using evaluate_during_training."
)
if not output_dir:
output_dir = self.args.output_dir
if os.path.exists(output_dir) and os.listdir(output_dir) and not self.args.overwrite_output_dir:
raise ValueError(
"Output directory ({}) already exists and is not empty."
" Set args.overwrite_output_dir = True to overcome.".format(output_dir)
)
self._move_model_to_device()
train_dataset = self.load_and_cache_examples(train_data, verbose=verbose)
os.makedirs(output_dir, exist_ok=True)
global_step, tr_loss = self.train(
train_dataset,
output_dir,
show_running_loss=show_running_loss,
eval_data=eval_data,
verbose=verbose,
**kwargs,
)
self._save_model(self.args.output_dir, model=self.model)
# model_to_save = self.model.module if hasattr(self.model, "module") else self.model
# model_to_save.save_pretrained(output_dir)
# self.encoder_tokenizer.save_pretrained(output_dir)
# self.decoder_tokenizer.save_pretrained(output_dir)
# torch.save(self.args, os.path.join(output_dir, "training_args.bin"))
if verbose:
logger.info(" Training of {} model complete. Saved to {}.".format(self.args.model_name, output_dir))
def train(
self, train_dataset, output_dir, show_running_loss=True, eval_data=None, verbose=True, **kwargs,
):
"""
Trains the model on train_dataset.
Utility function to be used by the train_model() method. Not intended to be used directly.
"""
model = self.model
args = self.args
tb_writer = SummaryWriter(logdir=args.tensorboard_dir)
train_sampler = RandomSampler(train_dataset)
train_dataloader = DataLoader(
train_dataset,
sampler=train_sampler,
batch_size=args.train_batch_size,
num_workers=self.args.dataloader_num_workers,
)
if args.max_steps > 0:
t_total = args.max_steps
args.num_train_epochs = args.max_steps // (len(train_dataloader) // args.gradient_accumulation_steps) + 1
else:
t_total = len(train_dataloader) // args.gradient_accumulation_steps * args.num_train_epochs
no_decay = ["bias", "LayerNorm.weight"]
optimizer_grouped_parameters = []
custom_parameter_names = set()
for group in self.args.custom_parameter_groups:
params = group.pop("params")
custom_parameter_names.update(params)
param_group = {**group}
param_group["params"] = [p for n, p in model.named_parameters() if n in params]
optimizer_grouped_parameters.append(param_group)
for group in self.args.custom_layer_parameters:
layer_number = group.pop("layer")
layer = f"layer.{layer_number}."
group_d = {**group}
group_nd = {**group}
group_nd["weight_decay"] = 0.0
params_d = []
params_nd = []
for n, p in model.named_parameters():
if n not in custom_parameter_names and layer in n:
if any(nd in n for nd in no_decay):
params_nd.append(p)
else:
params_d.append(p)
custom_parameter_names.add(n)
group_d["params"] = params_d
group_nd["params"] = params_nd
optimizer_grouped_parameters.append(group_d)
optimizer_grouped_parameters.append(group_nd)
if not self.args.train_custom_parameters_only:
optimizer_grouped_parameters.extend(
[
{
"params": [
p
for n, p in model.named_parameters()
if n not in custom_parameter_names and not any(nd in n for nd in no_decay)
],
"weight_decay": args.weight_decay,
},
{
"params": [
p
for n, p in model.named_parameters()
if n not in custom_parameter_names and any(nd in n for nd in no_decay)
],
"weight_decay": 0.0,
},
]
)
warmup_steps = math.ceil(t_total * args.warmup_ratio)
args.warmup_steps = warmup_steps if args.warmup_steps == 0 else args.warmup_steps
# TODO: Use custom optimizer like with BertSum?
optimizer = AdamW(optimizer_grouped_parameters, lr=args.learning_rate, eps=args.adam_epsilon)
# decay
scheduler = get_linear_schedule_with_warmup(
optimizer, num_warmup_steps=args.warmup_steps, num_training_steps=t_total
)
if (
args.model_name
and os.path.isfile(os.path.join(args.model_name, "optimizer.pt"))
and os.path.isfile(os.path.join(args.model_name, "scheduler.pt"))
):
# Load in optimizer and scheduler states
optimizer.load_state_dict(torch.load(os.path.join(args.model_name, "optimizer.pt")))
scheduler.load_state_dict(torch.load(os.path.join(args.model_name, "scheduler.pt")))
if args.n_gpu > 1:
model = torch.nn.DataParallel(model)
logger.info(" Training started")
global_step = 0
tr_loss, logging_loss = 0.0, 0.0
model.zero_grad()
train_iterator = trange(int(args.num_train_epochs), desc="Epoch", disable=args.silent, mininterval=0)
epoch_number = 0
best_eval_metric = None
early_stopping_counter = 0
steps_trained_in_current_epoch = 0
epochs_trained = 0
if args.model_name and os.path.exists(args.model_name):
try:
# set global_step to gobal_step of last saved checkpoint from model path
checkpoint_suffix = args.model_name.split("/")[-1].split("-")
if len(checkpoint_suffix) > 2:
checkpoint_suffix = checkpoint_suffix[1]
else:
checkpoint_suffix = checkpoint_suffix[-1]
global_step = int(checkpoint_suffix)
epochs_trained = global_step // (len(train_dataloader) // args.gradient_accumulation_steps)
steps_trained_in_current_epoch = global_step % (
len(train_dataloader) // args.gradient_accumulation_steps
)
logger.info(" Continuing training from checkpoint, will skip to saved global_step")
logger.info(" Continuing training from epoch %d", epochs_trained)
logger.info(" Continuing training from global step %d", global_step)
logger.info(" Will skip the first %d steps in the current epoch", steps_trained_in_current_epoch)
except ValueError:
logger.info(" Starting fine-tuning.")
if args.evaluate_during_training:
training_progress_scores = self._create_training_progress_scores(**kwargs)
if args.wandb_project:
wandb.init(project=args.wandb_project, config={**asdict(args)}, **args.wandb_kwargs)
wandb.watch(self.model)
if args.fp16:
from torch.cuda import amp
scaler = amp.GradScaler()
model.train()
for current_epoch in train_iterator:
if epochs_trained > 0:
epochs_trained -= 1
continue
train_iterator.set_description(f"Epoch {epoch_number + 1} of {args.num_train_epochs}")
batch_iterator = tqdm(
train_dataloader,
desc=f"Running Epoch {epoch_number} of {args.num_train_epochs}",
disable=args.silent,
mininterval=0,
)
for step, batch in enumerate(batch_iterator):
if steps_trained_in_current_epoch > 0:
steps_trained_in_current_epoch -= 1
continue
# batch = tuple(t.to(device) for t in batch)
inputs = self._get_inputs_dict(batch)
if args.fp16:
with amp.autocast():
outputs = model(**inputs)
# model outputs are always tuple in pytorch-transformers (see doc)
loss = outputs[0]
else:
outputs = model(**inputs)
# model outputs are always tuple in pytorch-transformers (see doc)
loss = outputs[0]
if args.n_gpu > 1:
loss = loss.mean() # mean() to average on multi-gpu parallel training
current_loss = loss.item()
if show_running_loss:
batch_iterator.set_description(
f"Epochs {epoch_number}/{args.num_train_epochs}. Running Loss: {current_loss:9.4f}"
)
if args.gradient_accumulation_steps > 1:
loss = loss / args.gradient_accumulation_steps
if args.fp16:
scaler.scale(loss).backward()
else:
loss.backward()
tr_loss += loss.item()
if (step + 1) % args.gradient_accumulation_steps == 0:
if args.fp16:
scaler.unscale_(optimizer)
torch.nn.utils.clip_grad_norm_(model.parameters(), args.max_grad_norm)
if args.fp16:
scaler.step(optimizer)
scaler.update()
else:
optimizer.step()
scheduler.step() # Update learning rate schedule
model.zero_grad()
global_step += 1
if args.logging_steps > 0 and global_step % args.logging_steps == 0:
# Log metrics
tb_writer.add_scalar("lr", scheduler.get_lr()[0], global_step)
tb_writer.add_scalar("loss", (tr_loss - logging_loss) / args.logging_steps, global_step)
logging_loss = tr_loss
if args.wandb_project:
wandb.log(
{
"Training loss": current_loss,
"lr": scheduler.get_lr()[0],
"global_step": global_step,
}
)
if args.save_steps > 0 and global_step % args.save_steps == 0:
# Save model checkpoint
output_dir_current = os.path.join(output_dir, "checkpoint-{}".format(global_step))
self._save_model(output_dir_current, optimizer, scheduler, model=model)
if args.evaluate_during_training and (
args.evaluate_during_training_steps > 0
and global_step % args.evaluate_during_training_steps == 0
):
# Only evaluate when single GPU otherwise metrics may not average well
results = self.eval_model(
eval_data,
verbose=verbose and args.evaluate_during_training_verbose,
silent=args.evaluate_during_training_silent,
**kwargs,
)
for key, value in results.items():
tb_writer.add_scalar("eval_{}".format(key), value, global_step)
output_dir_current = os.path.join(output_dir, "checkpoint-{}".format(global_step))
if args.save_eval_checkpoints:
self._save_model(output_dir_current, optimizer, scheduler, model=model, results=results)
training_progress_scores["global_step"].append(global_step)
training_progress_scores["train_loss"].append(current_loss)
for key in results:
training_progress_scores[key].append(results[key])
report = pd.DataFrame(training_progress_scores)
report.to_csv(
os.path.join(args.output_dir, "training_progress_scores.csv"), index=False,
)
if args.wandb_project:
wandb.log(self._get_last_metrics(training_progress_scores))
if not best_eval_metric:
best_eval_metric = results[args.early_stopping_metric]
if args.save_best_model:
self._save_model(
args.best_model_dir, optimizer, scheduler, model=model, results=results
)
if best_eval_metric and args.early_stopping_metric_minimize:
if results[args.early_stopping_metric] - best_eval_metric < args.early_stopping_delta:
best_eval_metric = results[args.early_stopping_metric]
if args.save_best_model:
self._save_model(
args.best_model_dir, optimizer, scheduler, model=model, results=results
)
early_stopping_counter = 0
else:
if args.use_early_stopping:
if early_stopping_counter < args.early_stopping_patience:
early_stopping_counter += 1
if verbose:
logger.info(f" No improvement in {args.early_stopping_metric}")
logger.info(f" Current step: {early_stopping_counter}")
logger.info(f" Early stopping patience: {args.early_stopping_patience}")
else:
if verbose:
logger.info(f" Patience of {args.early_stopping_patience} steps reached")
logger.info(" Training terminated.")
train_iterator.close()
return global_step, tr_loss / global_step
else:
if results[args.early_stopping_metric] - best_eval_metric > args.early_stopping_delta:
best_eval_metric = results[args.early_stopping_metric]
if args.save_best_model:
self._save_model(
args.best_model_dir, optimizer, scheduler, model=model, results=results
)
early_stopping_counter = 0
else:
if args.use_early_stopping:
if early_stopping_counter < args.early_stopping_patience:
early_stopping_counter += 1
if verbose:
logger.info(f" No improvement in {args.early_stopping_metric}")
logger.info(f" Current step: {early_stopping_counter}")
logger.info(f" Early stopping patience: {args.early_stopping_patience}")
else:
if verbose:
logger.info(f" Patience of {args.early_stopping_patience} steps reached")
logger.info(" Training terminated.")
train_iterator.close()
return global_step, tr_loss / global_step
epoch_number += 1
output_dir_current = os.path.join(output_dir, "checkpoint-{}-epoch-{}".format(global_step, epoch_number))
if args.save_model_every_epoch or args.evaluate_during_training:
os.makedirs(output_dir_current, exist_ok=True)
if args.save_model_every_epoch:
self._save_model(output_dir_current, optimizer, scheduler, model=model)
if args.evaluate_during_training:
results = self.eval_model(
eval_data,
verbose=verbose and args.evaluate_during_training_verbose,
silent=args.evaluate_during_training_silent,
**kwargs,
)
if args.save_eval_checkpoints:
self._save_model(output_dir_current, optimizer, scheduler, results=results)
training_progress_scores["global_step"].append(global_step)
training_progress_scores["train_loss"].append(current_loss)
for key in results:
training_progress_scores[key].append(results[key])
report = pd.DataFrame(training_progress_scores)
report.to_csv(os.path.join(args.output_dir, "training_progress_scores.csv"), index=False)
if args.wandb_project:
wandb.log(self._get_last_metrics(training_progress_scores))
if not best_eval_metric:
best_eval_metric = results[args.early_stopping_metric]
if args.save_best_model:
self._save_model(args.best_model_dir, optimizer, scheduler, model=model, results=results)
if best_eval_metric and args.early_stopping_metric_minimize:
if results[args.early_stopping_metric] - best_eval_metric < args.early_stopping_delta:
best_eval_metric = results[args.early_stopping_metric]
if args.save_best_model:
self._save_model(args.best_model_dir, optimizer, scheduler, model=model, results=results)
early_stopping_counter = 0
else:
if args.use_early_stopping and args.early_stopping_consider_epochs:
if early_stopping_counter < args.early_stopping_patience:
early_stopping_counter += 1
if verbose:
logger.info(f" No improvement in {args.early_stopping_metric}")
logger.info(f" Current step: {early_stopping_counter}")
logger.info(f" Early stopping patience: {args.early_stopping_patience}")
else:
if verbose:
logger.info(f" Patience of {args.early_stopping_patience} steps reached")
logger.info(" Training terminated.")
train_iterator.close()
return global_step, tr_loss / global_step
else:
if results[args.early_stopping_metric] - best_eval_metric > args.early_stopping_delta:
best_eval_metric = results[args.early_stopping_metric]
if args.save_best_model:
self._save_model(args.best_model_dir, optimizer, scheduler, model=model, results=results)
early_stopping_counter = 0
else:
if args.use_early_stopping and args.early_stopping_consider_epochs:
if early_stopping_counter < args.early_stopping_patience:
early_stopping_counter += 1
if verbose:
logger.info(f" No improvement in {args.early_stopping_metric}")
logger.info(f" Current step: {early_stopping_counter}")
logger.info(f" Early stopping patience: {args.early_stopping_patience}")
else:
if verbose:
logger.info(f" Patience of {args.early_stopping_patience} steps reached")
logger.info(" Training terminated.")
train_iterator.close()
return global_step, tr_loss / global_step
return global_step, tr_loss / global_step
def eval_model(self, eval_data, output_dir=None, verbose=True, silent=False, **kwargs):
"""
Evaluates the model on eval_data. Saves results to output_dir.
Args:
eval_data: Pandas DataFrame containing the 2 columns - `input_text`, `target_text`.
- `input_text`: The input text sequence.
- `target_text`: The target text sequence.
output_dir: The directory where model files will be saved. If not given, self.args.output_dir will be used.
verbose: If verbose, results will be printed to the console on completion of evaluation.
silent: If silent, tqdm progress bars will be hidden.
**kwargs: Additional metrics that should be used. Pass in the metrics as keyword arguments (name of metric: function to use).
A metric function should take in two parameters. The first parameter will be the true labels, and the second parameter will be the predictions. Both inputs
will be lists of strings. Note that this will slow down evaluation significantly as the predicted sequences need to be generated.
Returns:
results: Dictionary containing evaluation results.
""" # noqa: ignore flake8"
if not output_dir:
output_dir = self.args.output_dir
self._move_model_to_device()
eval_dataset = self.load_and_cache_examples(eval_data, evaluate=True, verbose=verbose, silent=silent)
os.makedirs(output_dir, exist_ok=True)
result = self.evaluate(eval_dataset, output_dir, verbose=verbose, silent=silent, **kwargs)
self.results.update(result)
if self.args.evaluate_generated_text:
# to_predict = eval_data["input_text"].tolist()
# preds = self.predict(to_predict)
# result = self.compute_metrics(eval_data["target_text"].tolist(), preds, **kwargs)
result = self.evaluate_decode(eval_dataset, output_dir, verbose=verbose, silent=silent, **kwargs)
self.results.update(result)
if verbose:
logger.info(self.results)
return self.results
def evaluate(self, eval_dataset, output_dir, verbose=True, silent=False, **kwargs):
"""
Evaluates the model on eval_dataset.
Utility function to be used by the eval_model() method. Not intended to be used directly.
"""
model = self.model
args = self.args
eval_output_dir = output_dir
results = {}
eval_sampler = SequentialSampler(eval_dataset)
eval_dataloader = DataLoader(eval_dataset, sampler=eval_sampler, batch_size=args.eval_batch_size)
if args.n_gpu > 1:
model = torch.nn.DataParallel(model)
eval_loss = 0.0
nb_eval_steps = 0
model.eval()
for batch in tqdm(eval_dataloader, disable=args.silent or silent, desc="Running Evaluation"):
# batch = tuple(t.to(device) for t in batch)
inputs = self._get_inputs_dict(batch)
with torch.no_grad():
outputs = model(**inputs)
loss = outputs[0]
eval_loss += loss.mean().item()
nb_eval_steps += 1
eval_loss = eval_loss / nb_eval_steps
results["eval_loss"] = eval_loss
output_eval_file = os.path.join(eval_output_dir, "eval_results.txt")
with open(output_eval_file, "w") as writer:
for key in sorted(results.keys()):
writer.write("{} = {}\n".format(key, str(results[key])))
return results
def evaluate_decode(self, eval_dataset, output_dir, verbose=True, silent=False, **kwargs):
"""
Evaluates the model on eval_dataset.
Utility function to be used by the eval_model() method. Not intended to be used directly.
"""
model = self.model
args = self.args
eval_output_dir = output_dir
results = {}
eval_sampler = SequentialSampler(eval_dataset)
eval_dataloader = DataLoader(eval_dataset, sampler=eval_sampler, batch_size=args.eval_batch_size)
if args.n_gpu > 1:
model = torch.nn.DataParallel(model)
eval_loss = 0.0
nb_eval_steps = 0
model.eval()
correct, count = 0, 0
for batch in tqdm(eval_dataloader, disable=args.silent or silent, desc="Running Evaluation"):
# batch = tuple(t.to(device) for t in batch)
inputs = self._get_inputs_dict(batch)
# print(inputs)
with torch.no_grad():
outputs = model(**inputs)
loss = outputs[0]
eval_loss += loss.mean().item()
decode_outputs = torch.argmax(outputs[1], dim=-1).view(-1)
labels = inputs["labels"].view(-1)
for i, j in zip(labels, decode_outputs):
if i == j and i != -100:
correct += 1
if i != -100:
count += 1
nb_eval_steps += 1
results["eval_acc"] = correct / count
return results
def predict(self, to_predict):
"""
Performs predictions on a list of text.
Args:
to_predict: A python list of text (str) to be sent to the model for prediction. Note that the prefix should be prepended to the text.
Returns:
preds: A python list of the generated sequences.
""" # noqa: ignore flake8"
self._move_model_to_device()
all_outputs = []
# Batching
for batch in [
to_predict[i : i + self.args.eval_batch_size] for i in range(0, len(to_predict), self.args.eval_batch_size)
]:
if self.args.model_type == "marian":
input_ids = self.encoder_tokenizer.prepare_translation_batch(
batch, max_length=self.args.max_seq_length, padding='max_length', truncation=True, return_tensors="pt",
)["input_ids"]
else:
input_ids = self.encoder_tokenizer.batch_encode_plus(
batch, max_length=self.args.max_seq_length, padding='max_length', truncation=True, return_tensors="pt",
)["input_ids"]
input_ids = input_ids.to(self.device)
if self.args.model_type in ["bart", "marian", "blender", "blender-large"]:
outputs = self.model.generate(
input_ids=input_ids,
num_beams=self.args.num_beams,
max_length=self.args.max_length,
length_penalty=self.args.length_penalty,
early_stopping=self.args.early_stopping,
repetition_penalty=self.args.repetition_penalty,
do_sample=self.args.do_sample,
top_k=self.args.top_k,
top_p=self.args.top_p,
num_return_sequences=self.args.num_return_sequences,
# temperature=0.7
)
else:
outputs = self.model.generate(
input_ids=input_ids,
decoder_start_token_id=self.model.config.decoder.pad_token_id,
num_beams=self.args.num_beams,
max_length=self.args.max_length,
length_penalty=self.args.length_penalty,
early_stopping=self.args.early_stopping,
repetition_penalty=self.args.repetition_penalty,
do_sample=self.args.do_sample,
top_k=self.args.top_k,
top_p=self.args.top_p,
num_return_sequences=self.args.num_return_sequences,
)
all_outputs.extend(outputs.cpu().numpy())
if self.args.use_multiprocessed_decoding:
self.model.to("cpu")
with Pool(self.args.process_count) as p:
outputs = list(
tqdm(
p.imap(self._decode, all_outputs, chunksize=self.args.multiprocessing_chunksize),
total=len(all_outputs),
desc="Decoding outputs",
disable=self.args.silent,
)
)
self._move_model_to_device()
else:
outputs = [
self.decoder_tokenizer.decode(output_id, skip_special_tokens=True, clean_up_tokenization_spaces=True)
for output_id in all_outputs
]
if self.args.num_return_sequences > 1:
return [
outputs[i : i + self.args.num_return_sequences]
for i in range(0, len(outputs), self.args.num_return_sequences)
]
else:
return outputs
def predict_sep(self, to_predict, decoder_input_token_id):
"""
Performs predictions on a list of text.
Args:
to_predict: A python list of text (str) to be sent to the model for prediction. Note that the prefix should be prepended to the text.
Returns:
preds: A python list of the generated sequences.
""" # noqa: ignore flake8"
self._move_model_to_device()
all_outputs = []
# Batching
for batch in [
to_predict[i : i + self.args.eval_batch_size] for i in range(0, len(to_predict), self.args.eval_batch_size)
]:
if self.args.model_type == "marian":
input_ids = self.encoder_tokenizer.prepare_translation_batch(
batch, max_length=self.args.max_seq_length, padding='max_length', truncation=True, return_tensors="pt",
)["input_ids"]
else:
input_ids = self.encoder_tokenizer.batch_encode_plus(
batch, max_length=self.args.max_seq_length, padding='max_length', truncation=True, return_tensors="pt",
)["input_ids"]
input_ids = input_ids.to(self.device)
if self.args.model_type in ["bart", "marian", "blender", "blender-large"]:
outputs = self.model.generate(
input_ids=input_ids,
num_beams=self.args.num_beams,
max_length=self.args.max_length,
length_penalty=self.args.length_penalty,
early_stopping=self.args.early_stopping,
repetition_penalty=self.args.repetition_penalty,
do_sample=self.args.do_sample,
top_k=self.args.top_k,
top_p=self.args.top_p,
num_return_sequences=self.args.num_return_sequences,
decoder_start_token_id=decoder_input_token_id
# temperature=0.7
)
else:
outputs = self.model.generate(
input_ids=input_ids,
decoder_start_token_id=self.model.config.decoder.pad_token_id,
num_beams=self.args.num_beams,
max_length=self.args.max_length,
length_penalty=self.args.length_penalty,
early_stopping=self.args.early_stopping,
repetition_penalty=self.args.repetition_penalty,
do_sample=self.args.do_sample,
top_k=self.args.top_k,
top_p=self.args.top_p,
num_return_sequences=self.args.num_return_sequences,
)
all_outputs.extend(outputs.cpu().numpy())
if self.args.use_multiprocessed_decoding:
self.model.to("cpu")
with Pool(self.args.process_count) as p:
outputs = list(
tqdm(
p.imap(self._decode, all_outputs, chunksize=self.args.multiprocessing_chunksize),
total=len(all_outputs),
desc="Decoding outputs",
disable=self.args.silent,
)
)
self._move_model_to_device()
else:
outputs = [
self.decoder_tokenizer.decode(output_id, skip_special_tokens=True, clean_up_tokenization_spaces=True)
for output_id in all_outputs
]
if self.args.num_return_sequences > 1:
return [
outputs[i : i + self.args.num_return_sequences]
for i in range(0, len(outputs), self.args.num_return_sequences)
]
else:
return outputs
def _decode(self, output_id):
return self.decoder_tokenizer.decode(output_id, skip_special_tokens=True, clean_up_tokenization_spaces=True)
def compute_metrics(self, labels, preds, **kwargs):
"""
Computes the evaluation metrics for the model predictions.
Args:
labels: List of target sequences
preds: List of model generated outputs
**kwargs: Custom metrics that should be used. Pass in the metrics as keyword arguments (name of metric: function to use).
A metric function should take in two parameters. The first parameter will be the true labels, and the second parameter will be the predictions. Both inputs
will be lists of strings. Note that this will slow down evaluation significantly as the predicted sequences need to be generated.
Returns:
result: Dictionary containing evaluation results.
""" # noqa: ignore flake8"
assert len(labels) == len(preds)
acc = 0
total_count = 0
results = {}
for sentence_i, sentence_j in zip(labels, preds):
sentence_i = sentence_i.strip()
sentence_i = sentence_i.replace(".", " .")
sentence_i = sentence_i.replace(",", " ,")
sentence_i = sentence_i.replace("?", " ?")
total_count += len(sentence_i.split())
print(sentence_i.split())