diff --git a/docs/Doxyfile b/docs/Doxyfile
index 1e2293dd9..e7f9d3584 100644
--- a/docs/Doxyfile
+++ b/docs/Doxyfile
@@ -1,6 +1,7 @@
 DOXYFILE_ENCODING      = UTF-8
 PROJECT_NAME           = "FV3DYCORE"
 PROJECT_LOGO	       = image/UFSLogo.png
+PROJECT_NUMBER         = "Version 1.1.0"
 CREATE_SUBDIRS         = NO
 OUTPUT_LANGUAGE        = English
 BRIEF_MEMBER_DESC      = YES
diff --git a/model/fv_control.F90 b/model/fv_control.F90
index 52743734c..ae4202714 100644
--- a/model/fv_control.F90
+++ b/model/fv_control.F90
@@ -707,7 +707,7 @@ subroutine run_setup(Atm, dt_atmos, grids_on_this_pe, p_split)
 !!
 !> \param[in] res\_latlon\_tracers character(len=128) If external\_ic =.true. and both ncep\_ic and fv\_diag\_ic are.false., this variable gives the filename of the initial conditions for the tracers, assumed to be a legacy lat-lon FV core restart file. INPUT/atmos\_tracers.res.nc by default. 
 !!
-!> \param[in] warm\_start] Logical; whether to start from restart files, instead of cold-starting the model. True by default; if this is set to true and restart files cannot be found the model will stop.
+!> \param[in] warm\_start Logical: whether to start from restart files, instead of cold-starting the model. True by default; if this is set to true and restart files cannot be found the model will stop.
 !!
 !>###A1.3 I/O and diagnostic options:
 !!
@@ -743,6 +743,8 @@ subroutine run_setup(Atm, dt_atmos, grids_on_this_pe, p_split)
 !!
 !> \param[in] fill Logical: Fills in negative tracer values by taking positive tracers from the cells above and below. This option is useful when the physical parameterizations produced negatives. False by default.
 !!
+!> \param[in] gfs_phil Logical: Obsolete - to be removed
+!!
 !> \param[in] inline\_q Logical: whether to compute tracer transport in-line with the rest of the dynamics instead of sub-cycling, so that tracer transport is done at the same time and on the same time step as is `p` and potential temperature. False by default; if true, q\_split and z\_tracer are ignored. 
 !!
 !> \param[in] ncnst Integer: Number of tracer species advected by fv\_tracer in the dynamical core. Typically this is set automatically by reading in values from field\_table, but ncnst can be set to a smaller value so only the first ncnst tracers listed in field\_table are not advected. 0 by default, which will use the value from field\_table. 
@@ -946,6 +948,8 @@ subroutine run_setup(Atm, dt_atmos, grids_on_this_pe, p_split)
 !!
 !> \param[in] levp  Integer: number of levels in the input (remapped) initial conditions. 64 by default. Only active if nggps\_ic = .true.
 !!
+!> \param[in] gfs_dwinds  Logical: obsolete - to be removed
+!!
 !> \param[in] checker\_tr  Logical: whether to enable the ``checkerboard'' tracer test. .false. by default. Only active if nggps\_ic = .true.
 !!
 !> \param[in] nt\_checker  Integer: number of tracers (at the end of the list of tracers defined in field\_table) to initialize with an idealized ``checkerboard'' pattern, with values of either 0 or 1. This is intended to test the monotonicity or positivity constraint in the advection scheme. 0 by default. Only active if nggps\_ic = .true.